RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHYHD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000175287

Ensembl transcript IDs: ENST00000308941.9, ENST00000353176.9, ENST00000372592.8, ENST00000412476.5, ENST00000419552.5, ENST00000419872.1, ENST00000421063.6, ENST00000424503.1, ENST00000426694.5, ENST00000428610.5, ENST00000442837.5, ENST00000451000.5, ENST00000487504.1

Found 505 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACAAAGAGGCTGTTATCCCGGGCTGGCTCTGACCCAAGGAAGCTaGTACCAGGCGCTGAGCCAACAGGGGCCCGGACCATCCTTCTTG +
Preference number: 1 (lower is better)
Translates to: AQRGCYPGLALTQGS*YQALSQQGPGPSFL
Trigger: CAAGAAGGATGGTCCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGCTTCCTTGGGTCAGAGCCAGCCCGGGATAACAGCCTCTTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
3UTR TCA 90 bp AAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTaGGCAAGGCACTGGTGTTTACAGCCCACAGCTTCACCCGGGAGG +
Preference number: 1 (lower is better)
Translates to: KPRRGDKTSLLQPGG*ARHWCLQPTASPGR
Trigger: CCTCCCGGGTGAAGCTGTGGGCTGTAAACACCAGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
3UTR GCA 90 bp TGGTGTTTACAGCCCACAGCTTCACCCGGGAGGGGCGAGGGCTCCTaGCCTGCGAGAGCCTTTAGGTGTACAGTTGGGGAAAGGGCAGTT +
Preference number: 1 (lower is better)
Translates to: WCLQPTASPGRGEGS*PARAFRCTVGERAV
Trigger: AACTGCCCTTTCCCCAACTGTACACCTAAAGGCTCTCGCAGGGCAGGAGCCCTCGCCCCTCCCGGGTGAAGCTGTGGGCTGTAAACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000419872.1
3UTR TCA 90 bp TCAGCTGTTGGCTGGAGCCTGCAGAGGATAGAGGAGAAACAACCTTaGGGTGCAGGGTCACTGTTCCCAGCCTCCAGGGGACTGTCGGGC +
Preference number: 1 (lower is better)
Translates to: SAVGWSLQRIEEKQP*GAGSLFPASRGLSG
Trigger: GCCCGACAGTCCCCTGGAGGCTGGGAACAGTGACCCTGCACCTCAAGGTTGTTTCTCCTCTATCCTCTGCAGGCTCCAGCCAACAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
3UTR TCA 90 bp CTGAGAGGAGAGGAGAGTGAGAAGGGGCCAGAACCCTTTGGTGGCTaGGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAG +
Preference number: 1 (lower is better)
Translates to: LRGEESEKGPEPFGG*EASSRLCWGSREAE
Trigger: CTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGCCCCTTCTCACTCTCCTCTCCTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR GCA 90 bp TGTTGGCTGGAGCCTGCAGAGGATAGAGGAGAAACAACCTTGAGGTaGAGGGTCACTGTTCCCAGCCTCCAGGGGACTGTCGGGCACACA +
Preference number: 1 (lower is better)
Translates to: CWLEPAEDRGETTLR*RVTVPSLQGTVGHT
Trigger: TGTGTGCCCGACAGTCCCCTGGAGGCTGGGAACAGTGACCCTGCACCTCAAGGTTGTTTCTCCTCTATCCTCTGCAGGCTCCAGCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
3UTR CCA 90 bp CCTGATGAGGGGAGACAATCCACTATCAGGGGAAGGAATGGAAGGTaGCTCCTCCTCTCCGGGCCAGGCTCCTACAACAGACAGGAGCAA +
Preference number: 1 (lower is better)
Translates to: PDEGRQSTIRGRNGR*LLLSGPGSYNRQEQ
Trigger: TTGCTCCTGTCTGTTGTAGGAGCCTGGCCCGGAGAGGAGGAGCCACCTTCCATTCCTTCCCCTGATAGTGGATTGTCTCCCCTCATCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412476.5
3UTR CCA 90 bp AATAGTCTGTGCTGCCCTGGGCTCGAAGCTGCTCCTCTTCCTGGGTaGAGAATTCTGTGCGGCAGTGGAGAGGAACATCCATTTCAGCCA +
Preference number: 1 (lower is better)
Translates to: NSLCCPGLEAAPLPG*RILCGSGEEHPFQP
Trigger: TGGCTGAAATGGATGTTCCTCTCCACTGCCGCACAGAATTCTCCACCCAGGAAGAGGAGCAGCTTCGAGCCCAGGGCAGCACAGACTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR CCA 90 bp CGAGAGCCTTTAGGTGTACAGTTGGGGAAAGGGCAGTTCAGCTGTTaGCTGGAGCCTGCAGAGGATAGAGGAGAAACAACCTTGAGGTGC +
Preference number: 1 (lower is better)
Translates to: REPLGVQLGKGQFSC*LEPAEDRGETTLRC
Trigger: GCACCTCAAGGTTGTTTCTCCTCTATCCTCTGCAGGCTCCAGCCAACAGCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGGCTCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
3UTR CCA 90 bp GCTCGAAGCTGCTCCTCTTCCTGGGTGGAGAATTCTGTGCGGCAGTaGAGAGGAACATCCATTTCAGCCACTATCTCGCCAATCCTTTGT +
Preference number: 1 (lower is better)
Translates to: ARSCSSSWVENSVRQ*RGTSISATISPILC
Trigger: ACAAAGGATTGGCGAGATAGTGGCTGAAATGGATGTTCCTCTCCACTGCCGCACAGAATTCTCCACCCAGGAAGAGGAGCAGCTTCGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR GCA 90 bp TGGAGAGGAACATCCATTTCAGCCACTATCTCGCCAATCCTTTGTTaGATGGCCACACACTCTTCCGCAGACAAGAATCCTTCCAGCACC +
Preference number: 1 (lower is better)
Translates to: WRGTSISATISPILC*MATHSSADKNPSST
Trigger: GGTGCTGGAAGGATTCTTGTCTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATAGTGGCTGAAATGGATGTTCCTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR CCA 90 bp GAGGAACATCCATTTCAGCCACTATCTCGCCAATCCTTTGTTGCATaGCCACACACTCTTCCGCAGACAAGAATCCTTCCAGCACCAGGA +
Preference number: 1 (lower is better)
Translates to: EEHPFQPLSRQSFVA*PHTLPQTRILPAPG
Trigger: TCCTGGTGCTGGAAGGATTCTTGTCTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATAGTGGCTGAAATGGATGTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR GCA 90 bp AGAAGAATCGAATCTTGTCACCACTGCTCAAGAAATAGTCTGTGCTaGCCTGTGGAAAGGGGACATCAGAGGACTGAGACAGCATCCTGG +
Preference number: 1 (lower is better)
Translates to: RRIESCHHCSRNSLC*PVERGHQRTETASW
Trigger: CCAGGATGCTGTCTCAGTCCTCTGATGTCCCCTTTCCACAGGGCAGCACAGACTATTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR GCA 90 bp CAAAGAAGAATCGAATCTTGTCACCACTGCTCAAGAAATAGTCTGTaGTGCCCTGTGGAAAGGGGACATCAGAGGACTGAGACAGCATCC +
Preference number: 1 (lower is better)
Translates to: QRRIESCHHCSRNSL*CPVERGHQRTETAS
Trigger: GGATGCTGTCTCAGTCCTCTGATGTCCCCTTTCCACAGGGCAGCACAGACTATTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR GCA 90 bp CATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTaGTCAAGAAATAGTCTGTGCTGCCCTGGGCTCGAAGCTGCTCCT +
Preference number: 1 (lower is better)
Translates to: HQKRLSQRRIESCHH*SRNSLCCPGLEAAP
Trigger: AGGAGCAGCTTCGAGCCCAGGGCAGCACAGACTATTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR GCA 90 bp CATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTaGTCAAGAAATAGTCTGTGCTGCCCTGTGGAAAGGGGACATCAG +
Preference number: 1 (lower is better)
Translates to: HQKRLSQRRIESCHH*SRNSLCCPVERGHQ
Trigger: CTGATGTCCCCTTTCCACAGGGCAGCACAGACTATTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR-3UTR CCA 90 bp GCTGGCTCTGACCCAAGGAAGCTGGTACCAGGCGCTGAGCCAACAGGGGCCCGGGACACACCACTGGTGTaGGAGCCAGGGATGAACCAG +
Preference number: 2 (lower is better)
Translates to: AGSDPRKLVPGAEPTGARDTPLV*EPGMNQ
Trigger: CTGGTTCATCCCTGGCTCCCACACCAGTGGTGTGTC...CCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGCTTCCTTGGGTCAGAGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
3UTR CAA 90 bp GGAGGGGCGAGGGCTCCTGCCCTGCGAGAGCCTTTAGGTGTACAGTaGGGGAAAGGGCAGTTCAGCTGTTGGCTGGAGCCAGTTCTCCGG +
Preference number: 2 (lower is better)
Translates to: GGARAPALREPLGVQ*GKGQFSCWLEPVLR
Trigger: CCGGAGAACTGGCTCCAGCCAACAGCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGGCTCTCGCAGGGCAGGAGCCCTCGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412476.5
3UTR-3UTR CCA 90 bp GTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACAGCCGTTCTCCAGCGTaGCATCCTCCACTGCGATCC +
Preference number: 2 (lower is better)
Translates to: VGARDEPETAVLQRGILHSRSPA*HPPLRS
Trigger: GGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCT...GTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
3UTR-3UTR CCA 90 bp GGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACTTGAAGACGGGGTCGTaGGCGTGCAGAGCGTGGCCA +
Preference number: 2 (lower is better)
Translates to: GMNQRQPFSSVASSTAIHLKTGS*ACRAWP
Trigger: TGGCCACGCTCTGCACGCCCACGACCCCGTCTTCAA...GTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR-3UTR GCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGCCCAGCCTAGGCTGCTaGCCACAGGGCAGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQPSLGC*PQGRRK
Trigger: TTTCCTCCTGCCCTGTGGGCAGCAGCCTAGGCTGGG...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR TCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGGAACCCTTTGGTGGCTaGGAAGCCTCCTCAAGGCTA +
Preference number: 2 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQEPFGG*EASSRL
Trigger: TAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTC...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR CCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGGGGGCCAGAACCCTTTaGTGGCTGAGAAGCCTCCTC +
Preference number: 2 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQGARTL*WLRSLL
Trigger: GAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGCCCC...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR CCA 90 bp ATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACACGGGAAGGAATGGAAGGTaGCTCCTCCTCTCCGGGCCA +
Preference number: 2 (lower is better)
Translates to: MNQRQPFSSVASSTAIHTGRNGR*LLLSGP
Trigger: TGGCCCGGAGAGGAGGAGCCACCTTCCATTCCTTCC...CGTGTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
3UTR CAA 90 bp TTCAGCTGTTGGCTGGAGCCTGCAGAGGATAGAGGAGAAACAACCTaGAGGTGCAGGGTCACTGTTCCCAGCCTCCAGGGGACTGTCGGG +
Preference number: 2 (lower is better)
Translates to: FSCWLEPAEDRGETT*RCRVTVPSLQGTVG
Trigger: CCCGACAGTCCCCTGGAGGCTGGGAACAGTGACCCTGCACCTCAAGGTTGTTTCTCCTCTATCCTCTGCAGGCTCCAGCCAACAGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
3UTR-3UTR TCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCATTGCAACCAGGAGGCTaGGCAAGGCACTGGTGTTTA +
Preference number: 2 (lower is better)
Translates to: AQEGRQDLPVATRRLSKALQPGG*ARHWCL
Trigger: TAAACACCAGTGCCTTGCTCAGCCTCCTGGTTGCAA...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR GCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAACAAGACCTCCCTGTTaGAACCAGGAGGCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: AQEGRQDLPVATRRLSKATRPPC*NQEAEQ
Trigger: TTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGT...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR GCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCGAAACAACCTTGAGGTaGAGGGTCACTGTTCCCAGC +
Preference number: 2 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAETTLR*RVTVPS
Trigger: GCTGGGAACAGTGACCCTGCACCTCAAGGTTGTTTC...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419872.1
3UTR-3UTR CCA 90 bp GCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATTCCTCAAGGCTATGTTaGGGCAGTAGGGAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: ARDEPETAVLQRGILHCDSSRLC*GSREAE
Trigger: CTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGA...ATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
3UTR-3UTR CCA 90 bp GTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTATCAGGGGAAGGAATaGAAGGTGGCTCCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: VGARDEPETAVLQRGILHYQGKE*KVAPPL
Trigger: GAGAGGAGGAGCCACCTTCCATTCCTTCCCCTGATA...GTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
3UTR-3UTR CCA 90 bp GGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACGTCTGTGCTGCCCTGTaGAAAGGGGACATCAGAGGA +
Preference number: 2 (lower is better)
Translates to: GMNQRQPFSSVASSTAIHVCAAL*KGDIRG
Trigger: TCCTCTGATGTCCCCTTTCCACAGGGCAGCACAGAC...GTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR-3UTR TCA 90 bp CACACCACTGGTGTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTTTGCAACCAGGAGGCTaGGCAAGGCACTGGTGTTTA +
Preference number: 2 (lower is better)
Translates to: HTTGVGARDEPETAVLQRLQPGG*ARHWCL
Trigger: TAAACACCAGTGCCTTGCTCAGCCTCCTGGTTGCAA...ACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCACACCAGTGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
3UTR-3UTR TCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGGAACCCTTTGGTGGCTaGGAAGCCTCCTCAAGGCTA +
Preference number: 2 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQEPFGG*EASSRL
Trigger: TAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTC...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR CCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGTCCTCAAGGCTATGTTaGGGCAGTAGGGAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQSSRLC*GSREAE
Trigger: CTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGA...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR CCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGCCAGAACCCTTTGGTaGCTGAGAAGCCTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: REVKILGKPLTQPRLLPTARTLW*LRSLLK
Trigger: CTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGC...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR TCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGTTGCAACCAGGAGGCTaGGCAAGGCACTGGTGTTTA +
Preference number: 2 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQLQPGG*ARHWCL
Trigger: TAAACACCAGTGCCTTGCTCAGCCTCCTGGTTGCAA...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR TCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGGAGGAGAAACAACCTTaGGGTGCAGGGTCACTGTTC +
Preference number: 2 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQEEKQP*GAGSLF
Trigger: GAACAGTGACCCTGCACCTCAAGGTTGTTTCTCCTC...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
3UTR-3UTR TCA 90 bp GCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCGTGGCCAATTTTGTTaGTGGATTTCTCCGGAGGGA +
Preference number: 2 (lower is better)
Translates to: ARDEPETAVLQRGILHCDRGQFC*WISPEG
Trigger: TCCCTCCGGAGAAATCCATCAACAAAATTGGCCACG...ATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR-3UTR TCA 90 bp ACCACGGGCATCTGGAGGCCCAGACTTCTGGCCAAGGTCTGCACCTTGAAGGAGCGTGGCCAATTTTGTTaGTGGATTTCTCCGGAGGGA +
Preference number: 2 (lower is better)
Translates to: TTGIWRPRLLAKVCTLKERGQFC*WISPEG
Trigger: TCCCTCCGGAGAAATCCATCAACAAAATTGGCCACG...CTCCTTCAAGGTGCAGACCTTGGCCAGAAGTCTGGGCCTCCAGATGCCCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
3UTR-3UTR GCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGACAAGACCTCCCTGTTaGAACCAGGAGGCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQTRPPC*NQEAEQ
Trigger: TTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGT...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR GCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAACAAGACCTCCCTGTTaGAACCAGGAGGCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: REVKILGKPLTQPRLLPTTRPPC*NQEAEQ
Trigger: TTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGT...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR GCA 90 bp GGTCTGCACCTTGAAGGAGTGTGTGATGCTCTTGAAGACGGGGTCGTGGGCGTGAAGATGTACATGCTCTaGACCACCACGGGCATCTGG +
Preference number: 2 (lower is better)
Translates to: GLHLEGVCDALEDGVVGVKMYML*TTTGIW
Trigger: CCAGATGCCCGTGGTGGTGCAGAGCATGTACATCTT...CACGCCCACGACCCCGTCTTCAAGAGCATCACACACTCCTTCAAGGTGCAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
3UTR-3UTR CCA 90 bp ACTGGGGTGGGCACAAAGAGGCTGTTATCCCGGGCTGGCTCTGACCCAAGGAAGTGGGCGTGCAGAGCGTaGCCAATTTTGTTGATGGAT +
Preference number: 2 (lower is better)
Translates to: TGVGTKRLLSRAGSDPRKWACRA*PILLMD
Trigger: ATCCATCAACAAAATTGGCCACGCTCTGCACGCCCA...CTTCCTTGGGTCAGAGCCAGCCCGGGATAACAGCCTCTTTGTGCCCACCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR-3UTR TCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAACCAGAGTTCCATCTaGGAGGAGAGGAGAGTGAGA +
Preference number: 2 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQNQSSI*EERRVR
Trigger: TCTCACTCTCCTCTCCTCTCAGATGGAACTCTGGTT...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR TCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAAACCAGAGTTCCATCTaGGAGGAGAGGAGAGTGAGA +
Preference number: 2 (lower is better)
Translates to: REVKILGKPLTQPRLLPTNQSSI*EERRVR
Trigger: TCTCACTCTCCTCTCCTCTCAGATGGAACTCTGGTT...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR-3UTR TCA 90 bp CCTTTGTTGCATGGCCACACACTCTTCCGCAGACAAGAATCCTTCCAGCACCAGAACTGCAGGCAGGCTTaGGACTCAGGCTTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: PLLHGHTLFRRQESFQHQNCRQA*DSGFPS
Trigger: ACTGGGGAAGCCTGAGTCTCAAGCCTGCCTGCAGTT...CTGGTGCTGGAAGGATTCTTGTCTGCGGAAGAGTGTGTGGCCATGCAACAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR-3UTR GCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAAGATCTGAGAACCATTaGTGTCTTAGATGTCCCACC +
Preference number: 2 (lower is better)
Translates to: AQEGRQDLPVATRRLSKARSENH*CLRCPT
Trigger: GGTGGGACATCTAAGACAGCAATGGTTCTCAGATCT...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
3UTR-3UTR CCA 90 bp ACCTTGAAGGAGTGTGTGATGCTCTTGAAGACGGGGTCGTGGGCGTGCAGAGCGTGGGCGTGCAGAGCGTaGCCAATTTTGTTGATGGAT +
Preference number: 2 (lower is better)
Translates to: TLKECVMLLKTGSWACRAWACRA*PILLMD
Trigger: ATCCATCAACAAAATTGGCCACGCTCTGCACGCCCA...CGCTCTGCACGCCCACGACCCCGTCTTCAAGAGCATCACACACTCCTTCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
3UTR-3UTR CCA 90 bp CACCTTGAAGGAGTGTGTGATGCTCTTGAAGACGGGGTCGTGGGCGTGCAGAGCCAATCCTTTGTTGCATaGCCACACACTCTTCCGCAG +
Preference number: 2 (lower is better)
Translates to: HLEGVCDALEDGVVGVQSQSFVA*PHTLPQ
Trigger: CTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTG...GCTCTGCACGCCCACGACCCCGTCTTCAAGAGCATCACACACTCCTTCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR-3UTR GCA 90 bp GGCATCTGGAGGCCCAGACTTCTGGCCAAGGTCTGCACCTTGAAGGAGTGTGTGAGAAATAGTCTGTGCTaGCCTGTGGAAAGGGGACAT +
Preference number: 2 (lower is better)
Translates to: GIWRPRLLAKVCTLKECVRNSLC*PVERGH
Trigger: ATGTCCCCTTTCCACAGGGCAGCACAGACTATTTCT...CACACACTCCTTCAAGGTGCAGACCTTGGCCAGAAGTCTGGGCCTCCAGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR-3UTR GCA 90 bp CCTTTAGGTGTACAGTTGGGGAAAGGGCAGTTCAGCTGTTGGCTGGAGCCAGTTACAAGACCTCCCTGTTaGAACCAGGAGGCTGAGCAA +
Preference number: 2 (lower is better)
Translates to: PLGVQLGKGQFSCWLEPVTRPPC*NQEAEQ
Trigger: TTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGT...AACTGGCTCCAGCCAACAGCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
3UTR-3UTR GCA 90 bp TGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGAATCTTGTCACCACTaGTCAAGAAATAGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: WEPGMNQRQPFSSVASSTESCHH*SRNSLC
Trigger: GCACAGACTATTTCTTGAGCAGTGGTGACAAGATTC...AGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR-3UTR CCA 90 bp ACCTTGAAGGAGTGTGTGATGCTCTTGAAGACGGGGTCGTGGGCGTGCAGAGCGAATTCTGTGCGGCAGTaGAGAGGAACATCCATTTCA +
Preference number: 2 (lower is better)
Translates to: TLKECVMLLKTGSWACRANSVRQ*RGTSIS
Trigger: TGAAATGGATGTTCCTCTCCACTGCCGCACAGAATT...CGCTCTGCACGCCCACGACCCCGTCTTCAAGAGCATCACACACTCCTTCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR-3UTR GCA 90 bp GTGCAGAGCGTGGCCAATTTTGTTGATGGATTTCTCCGGAGGGACCAGGAAATTTCCCCAGTCTGCAAATaGTCCTGTCTGACCCTTCCC +
Preference number: 2 (lower is better)
Translates to: VQSVANFVDGFLRRDQEISPVCK*SCLTLP
Trigger: GGGAAGGGTCAGACAGGAGCATTTGCAGACTGGGGA...AATTTCCTGGTCCCTCCGGAGAAATCCATCAACAAAATTGGCCACGCTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR CAA 90 bp GCAGTGGAGAGGAACATCCATTTCAGCCACTATCTCGCCAATCCTTaGTTGCATGGCCACACACTCTTCCGCAGACAAGAATCCTTCCAG +
Preference number: 2 (lower is better)
Translates to: AVERNIHFSHYLANP*LHGHTLFRRQESFQ
Trigger: CTGGAAGGATTCTTGTCTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATAGTGGCTGAAATGGATGTTCCTCTCCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR-3UTR GCA 90 bp CAGTGGAGAGGAACATCCATTTCAGCCACTATCTCGCCAATCCTTTGTTGCATGCAGGCTTCCCCAGTCTaGAAATGCTCCTGTCTGACC +
Preference number: 2 (lower is better)
Translates to: QWRGTSISATISPILCCMQASPV*KCSCLT
Trigger: GGTCAGACAGGAGCATTTGCAGACTGGGGAAGCCTG...CATGCAACAAAGGATTGGCGAGATAGTGGCTGAAATGGATGTTCCTCTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR-3UTR GCA 90 bp TCCTCTTCCTGGGTGGAGAATTCTGTGCGGCAGTGGAGAGGAACATCCATTTCATCGCCAATCCTTTGTTaGATGGCCACACACTCTTCC +
Preference number: 2 (lower is better)
Translates to: SSSWVENSVRQWRGTSISSPILC*MATHSS
Trigger: GGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGA...TGAAATGGATGTTCCTCTCCACTGCCGCACAGAATTCTCCACCCAGGAAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR-3UTR CCA 90 bp CTTTCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTTGAAGACGGGGTCGTaGGCGTGCAGAGCGTGGCCA +
Preference number: 2 (lower is better)
Translates to: LSHQKRLSQRRIESCHHCLKTGS*ACRAWP
Trigger: TGGCCACGCTCTGCACGCCCACGACCCCGTCTTCAA...GCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
3UTR-3UTR CAA 90 bp GTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACCCCGGACCATCCTTCTaGACACACCACTGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: VGARDEPETAVLQRGILHPGPSF*THHWCG
Trigger: CCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGGG...GTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
3UTR-3UTR CAA 90 bp GCTGGCTCTGACCCAAGGAAGCTGGTACCAGGCGCTGAGCCAACAGGGGCCCGGGCGTGGCCAATTTTGTaGATGGATTTCTCCGGAGGG +
Preference number: 3 (lower is better)
Translates to: AGSDPRKLVPGAEPTGARAWPIL*MDFSGG
Trigger: CCCTCCGGAGAAATCCATCAACAAAATTGGCCACGC...CCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGCTTCCTTGGGTCAGAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR-3UTR CAA 90 bp GGTGTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCGAGTGTGTGATGCTCTaGAAGACGGGGTCGTGGGCG +
Preference number: 3 (lower is better)
Translates to: GVGARDEPETAVLQRGILECVML*KTGSWA
Trigger: CGCCCACGACCCCGTCTTCAAGAGCATCACACACTC...GAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR TCA 72 bp GGCTGGAGCCTGCAGAGGATAGAGGAGAAACAACCTTaGGGTGCAGGGTCACTGTTCCCAGCCTCCAGGGGA +
Preference number: 3 (lower is better)
Translates to: GWSLQRIEEKQP*GAGSLFPASRG
Trigger: TCCCCTGGAGGCTGGGAACAGTGACCCTGCACCTCAAGGTTGTTTCTCCTCTATCCTCTGCAGGCTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
3UTR-3UTR CAA 90 bp CTCTGCACCACCACGGGCATCTGGAGGCCCAGACTTCTGGCCAAGGTCTGCACCAGAGCGTGGCCAATTTaGTTGATGGATTTCTCCGGA +
Preference number: 3 (lower is better)
Translates to: LCTTTGIWRPRLLAKVCTRAWPI*LMDFSG
Trigger: TCCGGAGAAATCCATCAACAAAATTGGCCACGCTCT...GGTGCAGACCTTGGCCAGAAGTCTGGGCCTCCAGATGCCCGTGGTGGTGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
3UTR-3UTR CAA 90 bp ATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACACGGCCAAGGTCTGCACCTaGAAGGAGTGTGTGATGCTC +
Preference number: 3 (lower is better)
Translates to: MNQRQPFSSVASSTAIHTAKVCT*KECVML
Trigger: GAGCATCACACACTCCTTCAAGGTGCAGACCTTGGC...CGTGTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR-3UTR CAA 90 bp ACCTTGAAGGAGTGTGTGATGCTCTTGAAGACGGGGTCGTGGGCGTGCAGAGCGCAGGAATCCATCCTGTaGGAACTGCAGGCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: TLKECVMLLKTGSWACRAQESIL*ELQAGL
Trigger: CAAGCCTGCCTGCAGTTCCAACAGGATGGATTCCTG...CGCTCTGCACGCCCACGACCCCGTCTTCAAGAGCATCACACACTCCTTCAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR TCA 72 bp GAGGAGAGTGAGAAGGGGCCAGAACCCTTTGGTGGCTaGGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGG +
Preference number: 3 (lower is better)
Translates to: EESEKGPEPFGG*EASSRLCWGSR
Trigger: CCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGCCCCTTCTCACTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR GCA 72 bp GAGCCTGCAGAGGATAGAGGAGAAACAACCTTGAGGTaGAGGGTCACTGTTCCCAGCCTCCAGGGGACTGTC +
Preference number: 3 (lower is better)
Translates to: EPAEDRGETTLR*RVTVPSLQGTV
Trigger: GACAGTCCCCTGGAGGCTGGGAACAGTGACCCTGCACCTCAAGGTTGTTTCTCCTCTATCCTCTGCAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
3UTR CCA 72 bp GGGAGACAATCCACTATCAGGGGAAGGAATGGAAGGTaGCTCCTCCTCTCCGGGCCAGGCTCCTACAACAGA +
Preference number: 3 (lower is better)
Translates to: GRQSTIRGRNGR*LLLSGPGSYNR
Trigger: TCTGTTGTAGGAGCCTGGCCCGGAGAGGAGGAGCCACCTTCCATTCCTTCCCCTGATAGTGGATTGTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
3UTR TCA 72 bp CGGGGTCGTGGGCGTGCAGAGCGTGGCCAATTTTGTTaGTGGATTTCTCCGGAGGGACCAGGAAATTTCCTT +
Preference number: 3 (lower is better)
Translates to: RGRGRAERGQFC*WISPEGPGNFL
Trigger: AAGGAAATTTCCTGGTCCCTCCGGAGAAATCCATCAACAAAATTGGCCACGCTCTGCACGCCCACGACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
3UTR CCA 72 bp TGCTCCTCTTCCTGGGTGGAGAATTCTGTGCGGCAGTaGAGAGGAACATCCATTTCAGCCACTATCTCGCCA +
Preference number: 3 (lower is better)
Translates to: CSSSWVENSVRQ*RGTSISATISP
Trigger: TGGCGAGATAGTGGCTGAAATGGATGTTCCTCTCCACTGCCGCACAGAATTCTCCACCCAGGAAGAGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR-3UTR CAA 90 bp AGAGCCTTTAGGTGTACAGTTGGGGAAAGGGCAGTTCAGCTGTTGGCTGGAGCCAGAGGAGAAACAACCTaGAGGTGCAGGGTCACTGTT +
Preference number: 3 (lower is better)
Translates to: RAFRCTVGERAVQLLAGARGETT*RCRVTV
Trigger: AACAGTGACCCTGCACCTCAAGGTTGTTTCTCCTCT...GGCTCCAGCCAACAGCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
3UTR CCA 72 bp TTGAAGGAGTGTGTGATGCTCTTGAAGACGGGGTCGTaGGCGTGCAGAGCGTGGCCAATTTTGTTGATGGAT +
Preference number: 3 (lower is better)
Translates to: LKECVMLLKTGS*ACRAWPILLMD
Trigger: ATCCATCAACAAAATTGGCCACGCTCTGCACGCCCACGACCCCGTCTTCAAGAGCATCACACACTCCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
3UTR-3UTR CAA 90 bp ACTGGTGTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCAAGAAGAATCGAATCTaGTCACCACTGCTCAAGAAA +
Preference number: 3 (lower is better)
Translates to: TGVGARDEPETAVLQRGIKKNRI*SPLLKK
Trigger: TTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTT...GATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCACACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR TCA 72 bp ATAATAACCAGAGTTCCATCTGAGAGGAGAGGAGAGTaGGAAGGGGCCAGAACCCTTTGGTGGCTGAGAAGC +
Preference number: 3 (lower is better)
Translates to: IITRVPSERRGE*EGARTLWWLRS
Trigger: GCTTCTCAGCCACCAAAGGGTTCTGGCCCCTTCTCACTCTCCTCTCCTCTCAGATGGAACTCTGGTTATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
3UTR CCA 72 bp CCATTTCAGCCACTATCTCGCCAATCCTTTGTTGCATaGCCACACACTCTTCCGCAGACAAGAATCCTTCCA +
Preference number: 3 (lower is better)
Translates to: PFQPLSRQSFVA*PHTLPQTRILP
Trigger: TGGAAGGATTCTTGTCTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATAGTGGCTGAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR-3UTR CAA 90 bp AGCGTGGCCAATTTTGTTGATGGATTTCTCCGGAGGGACCAGGAAATTTCCTTTCTCGCCAATCCTTTGTaGCATGGCCACACACTCTTC +
Preference number: 3 (lower is better)
Translates to: SVANFVDGFLRRDQEISFLANPL*HGHTLF
Trigger: GAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAG...AAAGGAAATTTCCTGGTCCCTCCGGAGAAATCCATCAACAAAATTGGCCACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR GCA 72 bp ACATCCATTTCAGCCACTATCTCGCCAATCCTTTGTTaGATGGCCACACACTCTTCCGCAGACAAGAATCCT +
Preference number: 3 (lower is better)
Translates to: TSISATISPILC*MATHSSADKNP
Trigger: AGGATTCTTGTCTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATAGTGGCTGAAATGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR GCA 72 bp CGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTaGTCAAGAAATAGTCTGTGCTGCCCTGGGCTCGAA +
Preference number: 3 (lower is better)
Translates to: RLSQRRIESCHH*SRNSLCCPGLE
Trigger: TTCGAGCCCAGGGCAGCACAGACTATTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR GCA 72 bp CGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTaGTCAAGAAATAGTCTGTGCTGCCCTGTGGAAAGG +
Preference number: 3 (lower is better)
Translates to: RLSQRRIESCHH*SRNSLCCPVER
Trigger: CCTTTCCACAGGGCAGCACAGACTATTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR-3UTR CAA 90 bp CTTTCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCGCGTGGCCAATTTTGTaGATGGATTTCTCCGGAGGG +
Preference number: 3 (lower is better)
Translates to: LSHQKRLSQRRIESCHHCAWPIL*MDFSGG
Trigger: CCCTCCGGAGAAATCCATCAACAAAATTGGCCACGC...GCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR TCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCGCTGGTACCAGGCGCTaGGCCAACAGGGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAAGTRR*ANRGPD
Trigger: GTCCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGC...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp GGTGTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCGCTGGTACCAGGCGCTaGGCCAACAGGGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: GVGARDEPETAVLQRGILAGTRR*ANRGPD
Trigger: GTCCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGC...GAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR TCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGGCTGGTACCAGGCGCTaGGCCAACAGGGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQAGTRR*ANRGPD
Trigger: GTCCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGC...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTGCCAAGCAGCTGGGCTaGGTCCCAGTCCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTAKQLG*VPVQAP
Trigger: CGGCGCCTGGACTGGGACTCAGCCCAGCTGCTTGGC...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR TCA 90 bp CACGGGCATCTGGAGGCCCAGACTTCTGGCCAAGGTCTGCACCTTGAAGGAGTGGCTGGTACCAGGCGCTaGGCCAACAGGGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: HGHLEAQTSGQGLHLEGVAGTRR*ANRGPD
Trigger: GTCCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGC...CACTCCTTCAAGGTGCAGACCTTGGCCAGAAGTCTGGGCCTCCAGATGCCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR CCA 90 bp AGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACACGCCCAGCACCGGCTCAGGCAGGCCATaGAGACGCTCAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: RQPFSSVASSTAIHTPSTGSGRP*RRSGHW
Trigger: CCAGTGCCCTGAGCGTCTCCATGGCCTGCCTGAGCC...GGTGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CCA 90 bp GCAGGGTCACTGTTCCCAGCCTCCAGGGGACTGTCGGGCACACACACCCACCCTACCAGGGCCCTGGTGTaGGAGCCAGGGATGAACCAG +
Preference number: 4 (lower is better)
Translates to: AGSLFPASRGLSGTHTHPTRALV*EPGMNQ
Trigger: CTGGTTCATCCCTGGCTCCCACACCAGGGCCCTGGT...AGGGTGGGTGTGTGTGCCCGACAGTCCCCTGGAGGCTGGGAACAGTGACCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
CDS-3UTR TCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGGCCAAGCAGCTGGGCTaGGTCCCAGTCCAGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQAKQLG*VPVQAP
Trigger: CGGCGCCTGGACTGGGACTCAGCCCAGCTGCTTGGC...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR TCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGCTGGTACCAGGCGCTaGGCCAACAGGGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTAGTRR*ANRGPD
Trigger: GTCCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGC...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCGGCAGGAGAATGGCGTaGACGCGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAGRRMA*TREAEL
Trigger: AAGCTCCGCCTCCCGCGTTCACGCCATTCTCCTGCC...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372592.8
CDS-3UTR GCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAGGTCAGAACAACACCTaGAGGCCGGGTGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKAGQNNT*RPGAAA
Trigger: AGCCGCCGCACCCGGCCTGCAGGTGTTGTTCTGACC...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR GCA 90 bp AGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACACGCCCAGCACCCGTGGCATCCTCCACTaGGATCCACACGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RQPFSSVASSTAIHTPSTRGILH*DPHAQH
Trigger: GTGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACG...GGTGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR GCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAAGGGGCGAGGGCTCCTaGCCTGCGAGAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKARGEGS*PARAFR
Trigger: CCTAAAGGCTCTCGCAGGGCAGGAGCCCTCGCCCCT...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGAGGGGCGAGGGCTCCTaGCCTGCGAGAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQRGEGS*PARAFR
Trigger: CCTAAAGGCTCTCGCAGGGCAGGAGCCCTCGCCCCT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCAGGGGCGAGGGCTCCTaGCCTGCGAGAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPARGEGS*PARAFR
Trigger: CCTAAAGGCTCTCGCAGGGCAGGAGCCCTCGCCCCT...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGAGGGGCGAGGGCTCCTaGCCTGCGAGAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRRGEGS*PARAFR
Trigger: CCTAAAGGCTCTCGCAGGGCAGGAGCCCTCGCCCCT...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCAGACGCTCAGGGCACTaGGCGGCTTCTAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPARRSGH*AASKRG
Trigger: GCCGCGCTTAGAAGCCGCCCAGTGCCCTGAGCGTCT...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGAGACGCTCAGGGCACTaGGCGGCTTCTAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRRRSGH*AASKRG
Trigger: GCCGCGCTTAGAAGCCGCCCAGTGCCCTGAGCGTCT...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGGGCTCAGGCAGGCCATaGAGACGCTCAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQGSGRP*RRSGHW
Trigger: CCAGTGCCCTGAGCGTCTCCATGGCCTGCCTGAGCC...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAGGCTCAGGCAGGCCATaGAGACGCTCAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKAGSGRP*RRSGHW
Trigger: CCAGTGCCCTGAGCGTCTCCATGGCCTGCCTGAGCC...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGCCCTGCTCAGCAGCTaGCAGGGCCACTCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEAALLSS*QGHSLA
Trigger: AGCCAGCGAGTGGCCCTGCCAGCTGCTGAGCAGGGC...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372592.8
CDS-3UTR CCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAGCTGAGGCAGGAGAATaGCGTGAACGCGGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKAAEAGE*RERGRR
Trigger: CCGCCTCCCGCGTTCACGCCATTCTCCTGCCTCAGC...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372592.8
CDS-3UTR TCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAGCTGGTACCAGGCGCTaGGCCAACAGGGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRAGTRR*ANRGPD
Trigger: GTCCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGC...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGATCCCGGGCTGGCTCTaGCCCAAGGAAGCTGGTACC +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQIPGWL*PKEAGT
Trigger: GGTACCAGCTTCCTTGGGTCAGAGCCAGCCCGGGAT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGATCCCGGGCTGGCTCTaGCCCAAGGAAGCTGGTACC +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRIPGWL*PKEAGT
Trigger: GGTACCAGCTTCCTTGGGTCAGAGCCAGCCCGGGAT...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp AGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACACGCCCAGCAATCCCGGGCTGGCTCTaGCCCAAGGAAGCTGGTACC +
Preference number: 4 (lower is better)
Translates to: RDSRSPAWHPPLRSTRPAIPGWL*PKEAGT
Trigger: GGTACCAGCTTCCTTGGGTCAGAGCCAGCCCGGGAT...TGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR GCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCGTGGCATCCTCCACTaGGATCCACACGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRRGILH*DPHAQH
Trigger: GTGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACG...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGCCCAGCCTAGGCTGCTaGCCACAGGGCAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQPSLGC*PQGRRK
Trigger: TTTCCTCCTGCCCTGTGGGCAGCAGCCTAGGCTGGG...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCCCCAGCCTAGGCTGCTaGCCACAGGGCAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAPSLGC*PQGRRK
Trigger: TTTCCTCCTGCCCTGTGGGCAGCAGCCTAGGCTGGG...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCCCAGCCTAGGCTGCTaGCCACAGGGCAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRPSLGC*PQGRRK
Trigger: TTTCCTCCTGCCCTGTGGGCAGCAGCCTAGGCTGGG...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACCCAGCCTAGGCTGCTaGCCACAGGGCAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKAPSLGC*PQGRRK
Trigger: TTTCCTCCTGCCCTGTGGGCAGCAGCCTAGGCTGGG...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTGCGGGAGGCGGAGCTTaGAGTGAGCCGAGATTGGGC +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTAGGGA*SEPRLG
Trigger: GCCCAATCTCGGCTCACTGCAAGCTCCGCCTCCCGC...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372592.8
CDS-3UTR CCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGGTCAGGCCAAGCAGCTaGGCTGAGTCCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRVRPSS*AESQSR
Trigger: CCTGGACTGGGACTCAGCCCAGCTGCTTGGCCTGAC...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTAGACGCTCAGGGCACTaGGCGGCTTCTAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTRRSGH*AASKRG
Trigger: GCCGCGCTTAGAAGCCGCCCAGTGCCCTGAGCGTCT...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGGGCTCAGGCAGGCCATaGAGACGCTCAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLGSGRP*RRSGHW
Trigger: CCAGTGCCCTGAGCGTCTCCATGGCCTGCCTGAGCC...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCATTGAAGACGGGGTCGTaGGCGTGCAGAGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKALKTGS*ACRAWP
Trigger: TGGCCACGCTCTGCACGCCCACGACCCCGTCTTCAA...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCGGCCCCTCTCTGCACTaGGGTGGGCACAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAGPSLH*GGHKEA
Trigger: AGCCTCTTTGTGCCCACCCCAGTGCAGAGAGGGGCC...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGACCAGGGCCCTGGTGTaGGAGCCAGGGATGAACCAG +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQTRALV*EPGMNQ
Trigger: CTGGTTCATCCCTGGCTCCCACACCAGGGCCCTGGT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419872.1
ENST00000442837.5
CDS-3UTR TCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTATCCCGGGCTGGCTCTaGCCCAAGGAAGCTGGTACC +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTIPGWL*PKEAGT
Trigger: GGTACCAGCTTCCTTGGGTCAGAGCCAGCCCGGGAT...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTATCCCGGGCTGGCTCTaGCCCAAGGAAGCTGGTACC +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEAIPGWL*PKEAGT
Trigger: GGTACCAGCTTCCTTGGGTCAGAGCCAGCCCGGGAT...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCCCACTTCTCCATGGATaGGGACCAGGGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAPLLHG*GPGPLS
Trigger: AGAGAGGGGCCCTGGTCCTCATCCATGGAGAAGTGG...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGGGTCAGAACAACACCTaGAGGCCGGGTGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQGQNNT*RPGAAA
Trigger: AGCCGCCGCACCCGGCCTGCAGGTGTTGTTCTGACC...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR GCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCGTGGCATCCTCCACTaGGATCCACACGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLRGILH*DPHAQH
Trigger: GTGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACG...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTCGTGGCATCCTCCACTaGGATCCACACGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEARGILH*DPHAQH
Trigger: GTGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACG...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTACCAGGGCCCCTCTCTaGACTGGGGTGGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEATRAPL*TGVGTK
Trigger: CTTTGTGCCCACCCCAGTGCAGAGAGGGGCCCTGGT...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGACCAGGGCCCCTCTCTaGACTGGGGTGGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLTRAPL*TGVGTK
Trigger: CTTTGTGCCCACCCCAGTGCAGAGAGGGGCCCTGGT...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp GGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACACCAGGGCCCCTCTCTaGACTGGGGTGGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: GMNQRQPFSSVASSTAIHTRAPL*TGVGTK
Trigger: CTTTGTGCCCACCCCAGTGCAGAGAGGGGCCCTGGT...GTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR GCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTACCAGGGCCCCTCTCTaGACTGGGGTGGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTTRAPL*TGVGTK
Trigger: CTTTGTGCCCACCCCAGTGCAGAGAGGGGCCCTGGT...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAAGGGGCGAGGGCTCCTaGCCTGCGAGAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTRGEGS*PARAFR
Trigger: CCTAAAGGCTCTCGCAGGGCAGGAGCCCTCGCCCCT...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTCCCAGCCTAGGCTGCTaGCCACAGGGCAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTPSLGC*PQGRRK
Trigger: TTTCCTCCTGCCCTGTGGGCAGCAGCCTAGGCTGGG...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCCGAGATTGGGCCACTaGACTAGAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRPRLGH*TRAWAT
Trigger: TGTCGCCCAGGCTCTAGTGCAGTGGCCCAATCTCGG...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372592.8
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGGTCGGGCTGGCACAGTaGAGCTGGGGTCAGAACAAC +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQVGLAQ*SWGQNN
Trigger: GTTGTTCTGACCCCAGCTCCACTGTGCCAGCCCGAC...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGCATCTCAAGTCGGGCTaGCACAGTGGAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQHLKSG*HSGAGV
Trigger: GACCCCAGCTCCACTGTGCCAGCCCGACTTGAGATG...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCCATCTCAAGTCGGGCTaGCACAGTGGAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAHLKSG*HSGAGV
Trigger: GACCCCAGCTCCACTGTGCCAGCCCGACTTGAGATG...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTGTCAGGCCAAGCAGCTaGGCTGAGTCCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTVRPSS*AESQSR
Trigger: CCTGGACTGGGACTCAGCCCAGCTGCTTGGCCTGAC...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGCTCAGGCAGGCCATaGAGACGCTCAGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTGSGRP*RRSGHW
Trigger: CCAGTGCCCTGAGCGTCTCCATGGCCTGCCTGAGCC...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTTTGAAGACGGGGTCGTaGGCGTGCAGAGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTLKTGS*ACRAWP
Trigger: TGGCCACGCTCTGCACGCCCACGACCCCGTCTTCAA...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGTTGAAGACGGGGTCGTaGGCGTGCAGAGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLLKTGS*ACRAWP
Trigger: TGGCCACGCTCTGCACGCCCACGACCCCGTCTTCAA...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGAGCCGTTCTCCAGCGTaGCATCCTCCACTGCGATCC +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRSRSPA*HPPLRS
Trigger: GGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCT...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAAGCCGTTCTCCAGCGTaGCATCCTCCACTGCGATCC +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKASRSPA*HPPLRS
Trigger: GGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCT...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGAGCCGTTCTCCAGCGTaGCATCCTCCACTGCGATCC +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQSRSPA*HPPLRS
Trigger: GGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGGGCCCCTCTCTGCACTaGGGTGGGCACAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLGPSLH*GGHKEA
Trigger: AGCCTCTTTGTGCCCACCCCAGTGCAGAGAGGGGCC...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTGGCCCCTCTCTGCACTaGGGTGGGCACAAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTGPSLH*GGHKEA
Trigger: AGCCTCTTTGTGCCCACCCCAGTGCAGAGAGGGGCC...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCGGGCAGTTCAGCTGTTaGCTGGAGCCAGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAGQFSC*LEPVLR
Trigger: CCGGAGAACTGGCTCCAGCCAACAGCTGAACTGCCC...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAGGGCAGTTCAGCTGTTaGCTGGAGCCAGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKAGQFSC*LEPVLR
Trigger: CCGGAGAACTGGCTCCAGCCAACAGCTGAACTGCCC...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCGGGGCCAGAACCCTTTaGTGGCTGAGAAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAGARTL*WLRSLL
Trigger: GAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGCCCC...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GCTGGCTCTGACCCAAGGAAGCTGGTACCAGGCGCTGAGCCAACAGGGGCCCGGTATCAGGGGAAGGAATaGAAGGTGGCTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: AGSDPRKLVPGAEPTGARYQGKE*KVAPPL
Trigger: GAGAGGAGGAGCCACCTTCCATTCCTTCCCCTGATA...CCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGCTTCCTTGGGTCAGAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CCA 90 bp GCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATGGTCAGAGCTGGGCCTaGGCTCGAAGCTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ARDEPETAVLQRGILHCDGQSWA*ARSCSS
Trigger: AGAGGAGCAGCTTCGAGCCCAGGCCCAGCTCTGACC...ATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR TCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCCCGGACCATCCTTCTTaGCACACCACTGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAPDHPS*HTTGVG
Trigger: TCCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGG...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp CCACTGGTGTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCACCGGACCATCCTTCTTaGCACACCACTGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: PLVWEPGMNQRQPFSSVAPDHPS*HTTGVG
Trigger: TCCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGG...TGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCACACCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR TCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTCCACTTCTCCATGGATaGGGACCAGGGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEAPLLHG*GPGPLS
Trigger: AGAGAGGGGCCCTGGTCCTCATCCATGGAGAAGTGG...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp GGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACCCACTTCTCCATGGATaGGGACCAGGGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: GMNQRQPFSSVASSTAIHPLLHG*GPGPLS
Trigger: AGAGAGGGGCCCTGGTCCTCATCCATGGAGAAGTGG...GTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR TCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCATGCCAGAGGCCTCCATaGGGTGGAAAGTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKACQRPP*GGKCRP
Trigger: AGGCCTACACTTTCCACCTCATGGAGGCCTCTGGCA...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGTGCCAGAGGCCTCCATaGGGTGGAAAGTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQCQRPP*GGKCRP
Trigger: AGGCCTACACTTTCCACCTCATGGAGGCCTCTGGCA...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGCCACTCGCTGGCTCTaGAAAACCGGCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEAATRWL*KTGCCL
Trigger: AAGGCAGCAGCCGGTTTTTCAGAGCCAGCGAGTGGC...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372592.8
CDS-3UTR GCA 90 bp GGCGTCCTGATGAGGGGAGACAATCCACTATCAGGGGAAGGAATGGAAGGTGGCGGTCAGAACAACACCTaGAGGCCGGGTGCGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GVLMRGDNPLSGEGMEGGGQNNT*RPGAAA
Trigger: AGCCGCCGCACCCGGCCTGCAGGTGTTGTTCTGACC...GCCACCTTCCATTCCTTCCCCTGATAGTGGATTGTCTCCCCTCATCAGGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR GCA 90 bp GCTGGCTCTGACCCAAGGAAGCTGGTACCAGGCGCTGAGCCAACAGGGGCCCGGTCGCCAATCCTTTGTTaGATGGCCACACACTCTTCC +
Preference number: 4 (lower is better)
Translates to: AGSDPRKLVPGAEPTGARSPILC*MATHSS
Trigger: GGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGA...CCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGCTTCCTTGGGTCAGAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR GCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACACGTGGCATCCTCCACTaGGATCCACACGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTRGILH*DPHAQH
Trigger: GTGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACG...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGACCAGGGCCCCTCTCTaGACTGGGGTGGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQTRAPL*TGVGTK
Trigger: CTTTGTGCCCACCCCAGTGCAGAGAGGGGCCCTGGT...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp GGAGACAATCCACTATCAGGGGAAGGAATGGAAGGTGGCTCCTCCTCTCCGGGCCCCAGCCTAGGCTGCTaGCCACAGGGCAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GDNPLSGEGMEGGSSSPGPSLGC*PQGRRK
Trigger: TTTCCTCCTGCCCTGTGGGCAGCAGCCTAGGCTGGG...GCCCGGAGAGGAGGAGCCACCTTCCATTCCTTCCCCTGATAGTGGATTGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR GCA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGCCACCCTTCTCAGCTTaGCCTGCTCAGCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLPPFSA*PAQQLA
Trigger: TGCCAGCTGCTGAGCAGGGCAAGCTGAGAAGGGTGG...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372592.8
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGCTGGCACAGTGGAGCTaGGGTCAGAACAACACCTGC +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQLAQWS*GQNNTC
Trigger: GCAGGTGTTGTTCTGACCCCAGCTCCACTGTGCCAG...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGGTCGGGCTGGCACAGTaGAGCTGGGGTCAGAACAAC +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLVGLAQ*SWGQNN
Trigger: GTTGTTCTGACCCCAGCTCCACTGTGCCAGCCCGAC...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGCATCTCAAGTCGGGCTaGCACAGTGGAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLHLKSG*HSGAGV
Trigger: GACCCCAGCTCCACTGTGCCAGCCCGACTTGAGATG...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGTCAGGCCAAGCAGCTaGGCTGAGTCCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTVRPSS*AESQSR
Trigger: CCTGGACTGGGACTCAGCCCAGCTGCTTGGCCTGAC...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAAGACGCTCAGGGCACTaGGCGGCTTCTAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRRRSGH*AASKRG
Trigger: GCCGCGCTTAGAAGCCGCCCAGTGCCCTGAGCGTCT...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGTCCTGTTGGAACTTCTaGAGCTGCGAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRSCWNF*SCEGLR
Trigger: CCTGAGCCCCTCGCAGCTCCAGAAGTTCCAACAGGA...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTCCTGTTGGAACTTCTaGAGCTGCGAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPASCWNF*SCEGLR
Trigger: CCTGAGCCCCTCGCAGCTCCAGAAGTTCCAACAGGA...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CCAACAGGGGCCCGGACCATCCTTCTTGACACACCACTGGTGTGGGAGCCAGGGGCTCCTCTTCCTGGGTaGAGAATTCTGTGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: PTGARTILLDTPLVWEPGAPLPG*RILCGS
Trigger: ACTGCCGCACAGAATTCTCCACCCAGGAAGAGGAGC...CCCTGGCTCCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGGGCCCCTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTAGCCGTTCTCCAGCGTaGCATCCTCCACTGCGATCC +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTSRSPA*HPPLRS
Trigger: GGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCT...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGAGCCGTTCTCCAGCGTaGCATCCTCCACTGCGATCC +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLSRSPA*HPPLRS
Trigger: GGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCT...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCGACACACCACTGGTGTaGGAGCCAGGGATGAACCAG +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPADTPLV*EPGMNQ
Trigger: CTGGTTCATCCCTGGCTCCCACACCAGTGGTGTGTC...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCAGTTCAGCTGTTGGCTaGAGCCAGTTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPASSAVG*SQFSGL
Trigger: GAGCCCGGAGAACTGGCTCCAGCCAACAGCTGAACT...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGAGTTCAGCTGTTGGCTaGAGCCAGTTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQSSAVG*SQFSGL
Trigger: GAGCCCGGAGAACTGGCTCCAGCCAACAGCTGAACT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGAGTTCAGCTGTTGGCTaGAGCCAGTTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRSSAVG*SQFSGL
Trigger: GAGCCCGGAGAACTGGCTCCAGCCAACAGCTGAACT...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAAGTTCAGCTGTTGGCTaGAGCCAGTTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKASSAVG*SQFSGL
Trigger: GAGCCCGGAGAACTGGCTCCAGCCAACAGCTGAACT...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTGGGCAGTTCAGCTGTTaGCTGGAGCCAGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTGQFSC*LEPVLR
Trigger: CCGGAGAACTGGCTCCAGCCAACAGCTGAACTGCCC...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGGGGCCAGAACCCTTTaGTGGCTGAGAAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEAGARTL*WLRSLL
Trigger: GAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGCCCC...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGACTAGCCGAGCATGGTaGCAGGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQTSRAW*QVPVVP
Trigger: TGGGACTACAGGCACCTGCCACCATGCTCGGCTAGT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGGGAAGGAATGGAAGGTaGCTCCTCCTCTCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLGRNGR*LLLSGP
Trigger: TGGCCCGGAGAGGAGGAGCCACCTTCCATTCCTTCC...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CCA 90 bp CACCACCACGGGCATCTGGAGGCCCAGACTTCTGGCCAAGGTCTGCACCTTGAAACTGAGACAGCATCCTaGGGTCAGAGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HHHGHLEAQTSGQGLHLETETAS*GQSWAW
Trigger: CCAGGCCCAGCTCTGACCCCAGGATGCTGTCTCAGT...TTCAAGGTGCAGACCTTGGCCAGAAGTCTGGGCCTCCAGATGCCCGTGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR CCA 90 bp CCAACAGGGGCCCGGACCATCCTTCTTGACACACCACTGGTGTGGGAGCCAGGGGTCTGTGCTGCCCTGTaGAAAGGGGACATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PTGARTILLDTPLVWEPGVCAAL*KGDIRG
Trigger: TCCTCTGATGTCCCCTTTCCACAGGGCAGCACAGAC...CCCTGGCTCCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGGGCCCCTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR CAA 72 bp GCCTGGCGCGAGCGGTCAGAGAGGTTCTGCTTGCTCTaGTGTACCACTTCTCCATGGATGAGGACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AWRERSERFCLL*CTTSPWMRTRA
Trigger: GGCCCTGGTCCTCATCCATGGAGAAGTGGTACACAAGAGCAAGCAGAACCTCTCTGACCGCTCGCGCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR TCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCGGGAAATTATGCTGTaGGAGGGTCAGGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRREIML*EGQAKQ
Trigger: CTGCTTGGCCTGACCCTCTCACAGCATAATTTCCCG...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR TCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGTGCCAGAGGCCTCCATaGGGTGGAAAGTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLCQRPP*GGKCRP
Trigger: AGGCCTACACTTTCCACCTCATGGAGGCCTCTGGCA...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGGAACCCTTTGGTGGCTaGGAAGCCTCCTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRREPFGG*EASSRL
Trigger: TAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTC...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAGAACCCTTTGGTGGCTaGGAAGCCTCCTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKAEPFGG*EASSRL
Trigger: TAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTC...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAGGTGCCGGGAAATTATaGTGTGAGAGGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKAGAGKL*CERVRP
Trigger: TGGCCTGACCCTCTCACAGCATAATTTCCCGGCACC...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR GCA 90 bp AGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACACGCCCAGCACCAAGATGTACATGCTCTaGACCACCACGGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: RQPFSSVASSTAIHTPSTKMYML*TTTGIW
Trigger: CCAGATGCCCGTGGTGGTGCAGAGCATGTACATCTT...GGTGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR GCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGCGTGGCATCCTCCACTaGGATCCACACGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGRGILH*DPHAQH
Trigger: GTGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACG...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGACGTGGCATCCTCCACTaGGATCCACACGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRRGILH*DPHAQH
Trigger: GTGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACG...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GTCGTGGGCGTGCAGAGCGTGGCCAATTTTGTTGATGGATTTCTCCGGAGGGACCGTGGCATCCTCCACTaGGATCCACACGCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: VVGVQSVANFVDGFLRRDRGILH*DPHAQH
Trigger: GTGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACG...GTCCCTCCGGAGAAATCCATCAACAAAATTGGCCACGCTCTGCACGCCCACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR GCA 90 bp AGAGCCTTTAGGTGTACAGTTGGGGAAAGGGCAGTTCAGCTGTTGGCTGGAGCCAGGGGCGAGGGCTCCTaGCCTGCGAGAGCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: RAFRCTVGERAVQLLAGARGEGS*PARAFR
Trigger: CCTAAAGGCTCTCGCAGGGCAGGAGCCCTCGCCCCT...GGCTCCAGCCAACAGCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000419872.1
CDS-3UTR CCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGTAATCCCAGCACTTTaGAGGCAGAGGCGCGCGGAT +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEAVIPAL*RQRRAD
Trigger: ATCCGCGCGCCTCTGCCTCCAAAGTGCTGGGATTAC...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTGTAATCCCAGCACTTTaGAGGCAGAGGCGCGCGGAT +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTVIPAL*RQRRAD
Trigger: ATCCGCGCGCCTCTGCCTCCAAAGTGCTGGGATTAC...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCTGGCACAGTGGAGCTaGGGTCAGAACAACACCTGC +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLLAQWS*GQNNTC
Trigger: GCAGGTGTTGTTCTGACCCCAGCTCCACTGTGCCAG...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGTCGGGCTGGCACAGTaGAGCTGGGGTCAGAACAAC +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTVGLAQ*SWGQNN
Trigger: GTTGTTCTGACCCCAGCTCCACTGTGCCAGCCCGAC...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGGTCGGGCTGGCACAGTaGAGCTGGGGTCAGAACAAC +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQVGLAQ*SWGQNN
Trigger: GTTGTTCTGACCCCAGCTCCACTGTGCCAGCCCGAC...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACAGGCCCAAGATACTTaGCATCTCAAGTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKAQAQDT*HLKSGW
Trigger: CCAGCCCGACTTGAGATGCCAAGTATCTTGGGCCTG...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp GTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACCAGGCCCAAGATACTTaGCATCTCAAGTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VGARDEPETAVLQRGILHQAQDT*HLKSGW
Trigger: CCAGCCCGACTTGAGATGCCAAGTATCTTGGGCCTG...GTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CCA 90 bp CGTGTACAGGAAGGAGGCGTCCTGATGAGGGGAGACAATCCACTATCAGGGGAAAGACGCTCAGGGCACTaGGCGGCTTCTAAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: RVQEGGVLMRGDNPLSGERRSGH*AASKRG
Trigger: GCCGCGCTTAGAAGCCGCCCAGTGCCCTGAGCGTCT...TTCCCCTGATAGTGGATTGTCTCCCCTCATCAGGACGCCTCCTTCCTGTACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CCA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGTCCTGTTGGAACTTCTaGAGCTGCGAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLSCWNF*SCEGLR
Trigger: CCTGAGCCCCTCGCAGCTCCAGAAGTTCCAACAGGA...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGGCTCCTCTTCCTGGGTaGAGAATTCTGTGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQAPLPG*RILCGS
Trigger: ACTGCCGCACAGAATTCTCCACCCAGGAAGAGGAGC...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CTGCACCACCACGGGCATCTGGAGGCCCAGACTTCTGGCCAAGGTCTGCACCTTGCTCCTCTTCCTGGGTaGAGAATTCTGTGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: LHHHGHLEAQTSGQGLHLAPLPG*RILCGS
Trigger: ACTGCCGCACAGAATTCTCCACCCAGGAAGAGGAGC...AAGGTGCAGACCTTGGCCAGAAGTCTGGGCCTCCAGATGCCCGTGGTGGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGTTGAAGACGGGGTCGTaGGCGTGCAGAGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGLKTGS*ACRAWP
Trigger: TGGCCACGCTCTGCACGCCCACGACCCCGTCTTCAA...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGCCGTTCTCCAGCGTaGCATCCTCCACTGCGATCC +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQSRSPA*HPPLRS
Trigger: GGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCT...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTGACACACCACTGGTGTaGGAGCCAGGGATGAACCAG +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTDTPLV*EPGMNQ
Trigger: CTGGTTCATCCCTGGCTCCCACACCAGTGGTGTGTC...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCTGACCCAAGGAAGCTaGTACCAGGCGCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLLTQGS*YQALSQ
Trigger: TTGGCTCAGCGCCTGGTACCAGCTTCCTTGGGTCAG...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTCTGACCCAAGGAAGCTaGTACCAGGCGCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTLTQGS*YQALSQ
Trigger: TTGGCTCAGCGCCTGGTACCAGCTTCCTTGGGTCAG...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGCTGACCCAAGGAAGCTaGTACCAGGCGCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLLTQGS*YQALSQ
Trigger: TTGGCTCAGCGCCTGGTACCAGCTTCCTTGGGTCAG...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGTGTACCACTTCTCCATaGATGAGGACCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQCTTSP*MRTRAP
Trigger: AGGGGCCCTGGTCCTCATCCATGGAGAAGTGGTACA...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTAGTTCAGCTGTTGGCTaGAGCCAGTTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTSSAVG*SQFSGL
Trigger: GAGCCCGGAGAACTGGCTCCAGCCAACAGCTGAACT...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGGGGCAGTTCAGCTGTTaGCTGGAGCCAGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQGQFSC*LEPVLR
Trigger: CCGGAGAACTGGCTCCAGCCAACAGCTGAACTGCCC...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCATCCTCAAGGCTATGTTaGGGCAGTAGGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKASSRLC*GSREAE
Trigger: CTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGA...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGTCCTCAAGGCTATGTTaGGGCAGTAGGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRSSRLC*GSREAE
Trigger: CTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGA...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp AGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACACGCCCAGCAGCCAGAACCCTTTGGTaGCTGAGAAGCCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: RDSRSPAWHPPLRSTRPAARTLW*LRSLLK
Trigger: CTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGC...TGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCGCCAGAACCCTTTGGTaGCTGAGAAGCCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAARTLW*LRSLLK
Trigger: CTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGC...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGGCCAGAACCCTTTaGTGGCTGAGAAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTGARTL*WLRSLL
Trigger: GAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGCCCC...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTACTAGCCGAGCATGGTaGCAGGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTTSRAW*QVPVVP
Trigger: TGGGACTACAGGCACCTGCCACCATGCTCGGCTAGT...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACACACTGCACTAGAGCCTaGGCGACAGAGCGAGACTCG +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTHCTRA*ATERDS
Trigger: CGAGTCTCGCTCTGTCGCCCAGGCTCTAGTGCAGTG...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372592.8
3UTR CAA 72 bp AGGGCTCCTGCCCTGCGAGAGCCTTTAGGTGTACAGTaGGGGAAAGGGCAGTTCAGCTGTTGGCTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RAPALREPLGVQ*GKGQFSCWLEP
Trigger: TGGCTCCAGCCAACAGCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGGCTCTCGCAGGGCAGGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
3UTR CAA 72 bp AGGGCTCCTGCCCTGCGAGAGCCTTTAGGTGTACAGTaGGGGAAAGGGCAGTTCAGCTGTTGGCTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RAPALREPLGVQ*GKGQFSCWLEP
Trigger: AGGCTCCAGCCAACAGCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGGCTCTCGCAGGGCAGGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
CDS-3UTR TCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTCGGGAAATTATGCTGTaGGAGGGTCAGGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTREIML*EGQAKQ
Trigger: CTGCTTGGCCTGACCCTCTCACAGCATAATTTCCCG...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR TCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTCGGGAAATTATGCTGTaGGAGGGTCAGGCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEAREIML*EGQAKQ
Trigger: CTGCTTGGCCTGACCCTCTCACAGCATAATTTCCCG...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR TCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACACCGGACCATCCTTCTTaGCACACCACTGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTPDHPS*HTTGVG
Trigger: TCCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGG...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGCCACTTCTCCATGGATaGGGACCAGGGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGPLLHG*GPGPLS
Trigger: AGAGAGGGGCCCTGGTCCTCATCCATGGAGAAGTGG...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGTGCCAGAGGCCTCCATaGGGTGGAAAGTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQCQRPP*GGKCRP
Trigger: AGGCCTACACTTTCCACCTCATGGAGGCCTCTGGCA...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTTGCAACCAGGAGGCTaGGCAAGGCACTGGTGTTTA +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPALQPGG*ARHWCL
Trigger: TAAACACCAGTGCCTTGCTCAGCCTCCTGGTTGCAA...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGTTGCAACCAGGAGGCTaGGCAAGGCACTGGTGTTTA +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQLQPGG*ARHWCL
Trigger: TAAACACCAGTGCCTTGCTCAGCCTCCTGGTTGCAA...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAACCCTTTGGTGGCTaGGAAGCCTCCTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEAEPFGG*EASSRL
Trigger: TAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTC...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGGAACCCTTTGGTGGCTaGGAAGCCTCCTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLEPFGG*EASSRL
Trigger: TAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTC...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGACTTCACCGCCAAAGTaGGGTTGCTGCACCTTGAAG +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQTSPPK*GCCTLK
Trigger: CTTCAAGGTGCAGCAACCTCACTTTGGCGGTGAAGT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353176.9
ENST00000421063.6
CDS-3UTR TCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGGAGGAGAAACAACCTTaGGGTGCAGGGTCACTGTTC +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRREEKQP*GAGSLF
Trigger: GAACAGTGACCCTGCACCTCAAGGTTGTTTCTCCTC...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
CDS-3UTR GCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGGGGTGGAGAATTCTGTaGGGCAGTGGAGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRGWRIL*GSGEEH
Trigger: ATGTTCCTCTCCACTGCCGCACAGAATTCTCCACCC...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGAAGATGTACATGCTCTaGACCACCACGGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRKMYML*TTTGIW
Trigger: CCAGATGCCCGTGGTGGTGCAGAGCATGTACATCTT...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
ENST00000442837.5
CDS-3UTR GCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCACAAGACCTCCCTGTTaGAACCAGGAGGCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPATRPPC*NQEAEQ
Trigger: TTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGT...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACACAAGACCTCCCTGTTaGAACCAGGAGGCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: VGARDEPETAVLQRGILHTRPPC*NQEAEQ
Trigger: TTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGT...GTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR GCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGACAAGACCTCCCTGTTaGAACCAGGAGGCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQTRPPC*NQEAEQ
Trigger: TTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTCAGGCCCAAGATACTTaGCATCTCAAGTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEAQAQDT*HLKSGW
Trigger: CCAGCCCGACTTGAGATGCCAAGTATCTTGGGCCTG...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp CCAACAGGGGCCCGGACCATCCTTCTTGACACACCACTGGTGTGGGAGCCAGGGCAATCCTTTGTTGCATaGCCACACACTCTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: PTGARTILLDTPLVWEPGQSFVA*PHTLPQ
Trigger: CTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTG...CCCTGGCTCCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGGGCCCCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR CCA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGGCTCCTCTTCCTGGGTaGAGAATTCTGTGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLAPLPG*RILCGS
Trigger: ACTGCCGCACAGAATTCTCCACCCAGGAAGAGGAGC...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGGACACACCACTGGTGTaGGAGCCAGGGATGAACCAG +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQDTPLV*EPGMNQ
Trigger: CTGGTTCATCCCTGGCTCCCACACCAGTGGTGTGTC...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACACTGACCCAAGGAAGCTaGTACCAGGCGCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTLTQGS*YQALSQ
Trigger: TTGGCTCAGCGCCTGGTACCAGCTTCCTTGGGTCAG...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGCTGACCCAAGGAAGCTaGTACCAGGCGCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQLTQGS*YQALSQ
Trigger: TTGGCTCAGCGCCTGGTACCAGCTTCCTTGGGTCAG...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGTGTACCACTTCTCCATaGATGAGGACCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLCTTSP*MRTRAP
Trigger: AGGGGCCCTGGTCCTCATCCATGGAGAAGTGGTACA...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp ACTGGGGTGGGCACAAAGAGGCTGTTATCCCGGGCTGGCTCTGACCCAAGGAAGTGTACCACTTCTCCATaGATGAGGACCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TGVGTKRLLSRAGSDPRKCTTSP*MRTRAP
Trigger: AGGGGCCCTGGTCCTCATCCATGGAGAAGTGGTACA...CTTCCTTGGGTCAGAGCCAGCCCGGGATAACAGCCTCTTTGTGCCCACCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAAGTTCAGCTGTTGGCTaGAGCCAGTTCTCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTSSAVG*SQFSGL
Trigger: GAGCCCGGAGAACTGGCTCCAGCCAACAGCTGAACT...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGGGGCAGTTCAGCTGTTaGCTGGAGCCAGTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGGQFSC*LEPVLR
Trigger: CCGGAGAACTGGCTCCAGCCAACAGCTGAACTGCCC...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTTCCTCAAGGCTATGTTaGGGCAGTAGGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTSSRLC*GSREAE
Trigger: CTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGA...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTTCCTCAAGGCTATGTTaGGGCAGTAGGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEASSRLC*GSREAE
Trigger: CTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGA...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGGCCAGAACCCTTTGGTaGCTGAGAAGCCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLARTLW*LRSLLK
Trigger: CTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGC...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTGCCAGAACCCTTTGGTaGCTGAGAAGCCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTARTLW*LRSLLK
Trigger: CTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGC...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAGGGGCCAGAACCCTTTaGTGGCTGAGAAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRGARTL*WLRSLL
Trigger: GAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGCCCC...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGAAAACTAGCCGAGCATaGTGGCAGGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQKTSRA*WQVPVV
Trigger: GACTACAGGCACCTGCCACCATGCTCGGCTAGTTTT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGTGTACCACTTCTCCATaGATGAGGACCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLCTTSP*MRTRAL
Trigger: CAGGGCCCTGGTCCTCATCCATGGAGAAGTGGTACA...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419872.1
ENST00000442837.5
CDS-3UTR TCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACGTGGCCAATTTTGTTaGTGGATTTCTCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKARGQFC*WISPEG
Trigger: TCCCTCCGGAGAAATCCATCAACAAAATTGGCCACG...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp GTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACCGTGGCCAATTTTGTTaGTGGATTTCTCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VGARDEPETAVLQRGILHRGQFC*WISPEG
Trigger: TCCCTCCGGAGAAATCCATCAACAAAATTGGCCACG...GTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR TCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGACCGGACCATCCTTCTTaGCACACCACTGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRPDHPS*HTTGVG
Trigger: TCCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGG...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp CCTTTAGGTGTACAGTTGGGGAAAGGGCAGTTCAGCTGTTGGCTGGAGCCAGTTATCCCGGGCTGGCTCTaGCCCAAGGAAGCTGGTACC +
Preference number: 4 (lower is better)
Translates to: PLGVQLGKGQFSCWLEPVIPGWL*PKEAGT
Trigger: GGTACCAGCTTCCTTGGGTCAGAGCCAGCCCGGGAT...AACTGGCTCCAGCCAACAGCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR TCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGATGCCAGAGGCCTCCATaGGGTGGAAAGTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRCQRPP*GGKCRP
Trigger: AGGCCTACACTTTCCACCTCATGGAGGCCTCTGGCA...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp AAGTGTAGGCCTGGCGCGAGCGGTCAGAGAGGTTCTGCTTGCTCTTGTGTACCATGCCAGAGGCCTCCATaGGGTGGAAAGTGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: KCRPGASGQRGSACSCVPCQRPP*GGKCRP
Trigger: AGGCCTACACTTTCCACCTCATGGAGGCCTCTGGCA...TGGTACACAAGAGCAAGCAGAACCTCTCTGACCGCTCGCGCCAGGCCTACACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR TCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGTTGCAACCAGGAGGCTaGGCAAGGCACTGGTGTTTA +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLLQPGG*ARHWCL
Trigger: TAAACACCAGTGCCTTGCTCAGCCTCCTGGTTGCAA...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTTTGCAACCAGGAGGCTaGGCAAGGCACTGGTGTTTA +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTLQPGG*ARHWCL
Trigger: TAAACACCAGTGCCTTGCTCAGCCTCCTGGTTGCAA...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCAACCAGAGTTCCATCTaGGAGGAGAGGAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPANQSSI*EERRVR
Trigger: TCTCACTCTCCTCTCCTCTCAGATGGAACTCTGGTT...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGAACCAGAGTTCCATCTaGGAGGAGAGGAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQNQSSI*EERRVR
Trigger: TCTCACTCTCCTCTCCTCTCAGATGGAACTCTGGTT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAAACCAGAGTTCCATCTaGGAGGAGAGGAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: AQEGRQDLPVATRRLSKANQSSI*EERRVR
Trigger: TCTCACTCTCCTCTCCTCTCAGATGGAACTCTGGTT...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp CACGGGCATCTGGAGGCCCAGACTTCTGGCCAAGGTCTGCACCTTGAAGGAGTGAACCTTGCAGCTGTGTaGAGGTGGGACCAGGTATCT +
Preference number: 4 (lower is better)
Translates to: HGHLEAQTSGQGLHLEGVNLAAV*RWDQVS
Trigger: AGATACCTGGTCCCACCTTCACACAGCTGCAAGGTT...CACTCCTTCAAGGTGCAGACCTTGGCCAGAAGTCTGGGCCTCCAGATGCCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR GCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGTGCCGGGAAATTATaGTGTGAGAGGGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTGAGKL*CERVRP
Trigger: TGGCCTGACCCTCTCACAGCATAATTTCCCGGCACC...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR GCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTCGCCAATCCTTTGTTaGATGGCCACACACTCTTCC +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPASPILC*MATHSS
Trigger: GGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGA...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp ACTGGGGTGGGCACAAAGAGGCTGTTATCCCGGGCTGGCTCTGACCCAAGGAAGGGGTGGAGAATTCTGTaGGGCAGTGGAGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: TGVGTKRLLSRAGSDPRKGWRIL*GSGEEH
Trigger: ATGTTCCTCTCCACTGCCGCACAGAATTCTCCACCC...CTTCCTTGGGTCAGAGCCAGCCCGGGATAACAGCCTCTTTGTGCCCACCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR GCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTCAAGAAATAGTCTGTaGTGCCCTGGGCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPASRNSL*CPGLEA
Trigger: AGCTTCGAGCCCAGGGCAGCACAGACTATTTCTTGA...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp CTCTGCACTGGGGTGGGCACAAAGAGGCTGTTATCCCGGGCTGGCTCTGACCCATCAAGAAATAGTCTGTaGTGCCCTGGGCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LCTGVGTKRLLSRAGSDPSRNSL*CPGLEA
Trigger: AGCTTCGAGCCCAGGGCAGCACAGACTATTTCTTGA...TGGGTCAGAGCCAGCCCGGGATAACAGCCTCTTTGTGCCCACCCCAGTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR GCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTAAGATGTACATGCTCTaGACCACCACGGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEAKMYML*TTTGIW
Trigger: CCAGATGCCCGTGGTGGTGCAGAGCATGTACATCTT...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
ENST00000442837.5
CDS-3UTR GCA 90 bp AGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACACGCCCAGCACGGTCAGAGAGGTTCTaGTTGCTCTTGTGTACCACT +
Preference number: 4 (lower is better)
Translates to: RDSRSPAWHPPLRSTRPARSERF*LLLCTT
Trigger: AGTGGTACACAAGAGCAAGCAGAACCTCTCTGACCG...TGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR GCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTACAAGACCTCCCTGTTaGAACCAGGAGGCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEATRPPC*NQEAEQ
Trigger: TTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGT...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGGAAACAACCTTGAGGTaGAGGGTCACTGTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLETTLR*RVTVPS
Trigger: GCTGGGAACAGTGACCCTGCACCTCAAGGTTGTTTC...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
CDS-3UTR GCA 90 bp GGTCTGCACCTTGAAGGAGTGTGTGATGCTCTTGAAGACGGGGTCGTGGGCGTGCAGGCTTCCCCAGTCTaGAAATGCTCCTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: GLHLEGVCDALEDGVVGVQASPV*KCSCLT
Trigger: GGTCAGACAGGAGCATTTGCAGACTGGGGAAGCCTG...CACGCCCACGACCCCGTCTTCAAGAGCATCACACACTCCTTCAAGGTGCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGGTAATCCCAGCACTTTaGAGGCAGAGGCGCGCGGAT +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGVIPAL*RQRRAD
Trigger: ATCCGCGCGCCTCTGCCTCCAAAGTGCTGGGATTAC...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGCAGGCCCAAGATACTTaGCATCTCAAGTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQQAQDT*HLKSGW
Trigger: CCAGCCCGACTTGAGATGCCAAGTATCTTGGGCCTG...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGTCCTGTTGGAACTTCTaGAGCTGCGAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGSCWNF*SCEGLR
Trigger: CCTGAGCCCCTCGCAGCTCCAGAAGTTCCAACAGGA...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGAGGAATCCATCCTGTTaGAACTTCTGGAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQRNPSC*NFWSCE
Trigger: CTCGCAGCTCCAGAAGTTCCAACAGGATGGATTCCT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCAATCCTTTGTTGCATaGCCACACACTCTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRQSFVA*PHTLPQ
Trigger: CTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTG...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTGGGCGTGCAGAGCGTaGCCAATTTTGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAWACRA*PILLMD
Trigger: ATCCATCAACAAAATTGGCCACGCTCTGCACGCCCA...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGTGGGCGTGCAGAGCGTaGCCAATTTTGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQWACRA*PILLMD
Trigger: ATCCATCAACAAAATTGGCCACGCTCTGCACGCCCA...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGGACACACCACTGGTGTaGGAGCCAGGGATGAACCAG +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGDTPLV*EPGMNQ
Trigger: CTGGTTCATCCCTGGCTCCCACACCAGTGGTGTGTC...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp ATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACACGTCCTCAAGGCTATGTTaGGGCAGTAGGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: MNQRQPFSSVASSTAIHTSSRLC*GSREAE
Trigger: CTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGA...CGTGTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGGCCAGAACCCTTTGGTaGCTGAGAAGCCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQARTLW*LRSLLK
Trigger: CTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGC...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGTGTACCACTTCTCCATaGATGAGGACCAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQCTTSP*MRTRAL
Trigger: CAGGGCCCTGGTCCTCATCCATGGAGAAGTGGTACA...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419872.1
ENST00000442837.5
CDS-3UTR TCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTCGTGGCCAATTTTGTTaGTGGATTTCTCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTRGQFC*WISPEG
Trigger: TCCCTCCGGAGAAATCCATCAACAAAATTGGCCACG...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCGTGGCCAATTTTGTTaGTGGATTTCTCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLRGQFC*WISPEG
Trigger: TCCCTCCGGAGAAATCCATCAACAAAATTGGCCACG...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR TCA 90 bp CCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCGTGGCCAATTTTGTTaGTGGATTTCTCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PGMNQRQPFSSVASSTAIRGQFC*WISPEG
Trigger: TCCCTCCGGAGAAATCCATCAACAAAATTGGCCACG...GATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR TCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAGAACCCTTTGGTGGCTaGGAAGCCTCCTCAAGGCTA +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQREPFGG*EASSRL
Trigger: TAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTC...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGAACCAGAGTTCCATCTaGGAGGAGAGGAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLNQSSI*EERRVR
Trigger: TCTCACTCTCCTCTCCTCTCAGATGGAACTCTGGTT...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTAACCAGAGTTCCATCTaGGAGGAGAGGAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEANQSSI*EERRVR
Trigger: TCTCACTCTCCTCTCCTCTCAGATGGAACTCTGGTT...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGTCGCCAATCCTTTGTTaGATGGCCACACACTCTTCC +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLSPILC*MATHSS
Trigger: GGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGA...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGTCAAGAAATAGTCTGTaGTGCCCTGGGCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLSRNSL*CPGLEA
Trigger: AGCTTCGAGCCCAGGGCAGCACAGACTATTTCTTGA...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCAGAGAGGTTCTGCTTaGTCTTGTGTACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRQRGSA*SCVPLL
Trigger: GAGAAGTGGTACACAAGAGCAAGCAGAACCTCTCTG...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTCGGTCAGAGAGGTTCTaGTTGCTCTTGTGTACCACT +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTRSERF*LLLCTT
Trigger: AGTGGTACACAAGAGCAAGCAGAACCTCTCTGACCG...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCGGTCAGAGAGGTTCTaGTTGCTCTTGTGTACCACT +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLRSERF*LLLCTT
Trigger: AGTGGTACACAAGAGCAAGCAGAACCTCTCTGACCG...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGAGGAATCCATCCTGTTaGAACTTCTGGAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLRNPSC*NFWSCE
Trigger: CTCGCAGCTCCAGAAGTTCCAACAGGATGGATTCCT...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGGAATCCATCCTGTTaGAACTTCTGGAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLRNPSC*NFWSCE
Trigger: CTCGCAGCTCCAGAAGTTCCAACAGGATGGATTCCT...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGCAATCCTTTGTTGCATaGCCACACACTCTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLQSFVA*PHTLPQ
Trigger: CTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTG...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTCAATCCTTTGTTGCATaGCCACACACTCTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTQSFVA*PHTLPQ
Trigger: CTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTG...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCAATCCTTTGTTGCATaGCCACACACTCTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GGREVKILGKPLTQPRLLQSFVA*PHTLPQ
Trigger: CTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTG...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp ACCACGGGCATCTGGAGGCCCAGACTTCTGGCCAAGGTCTGCACCTTGAAGGAGCAATCCTTTGTTGCATaGCCACACACTCTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: TTGIWRPRLLAKVCTLKEQSFVA*PHTLPQ
Trigger: CTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTG...CTCCTTCAAGGTGCAGACCTTGGCCAGAAGTCTGGGCCTCCAGATGCCCGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGGCTCCTCTTCCTGGGTaGAGAATTCTGTGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGAPLPG*RILCGS
Trigger: ACTGCCGCACAGAATTCTCCACCCAGGAAGAGGAGC...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAGCTCCTCTTCCTGGGTaGAGAATTCTGTGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRAPLPG*RILCGS
Trigger: ACTGCCGCACAGAATTCTCCACCCAGGAAGAGGAGC...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTTGGGCGTGCAGAGCGTaGCCAATTTTGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEAWACRA*PILLMD
Trigger: ATCCATCAACAAAATTGGCCACGCTCTGCACGCCCA...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTTGGGCGTGCAGAGCGTaGCCAATTTTGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTWACRA*PILLMD
Trigger: ATCCATCAACAAAATTGGCCACGCTCTGCACGCCCA...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGATGTACCACTTCTCCATaGATGAGGACCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRCTTSP*MRTRAP
Trigger: AGGGGCCCTGGTCCTCATCCATGGAGAAGTGGTACA...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGTGTACCACTTCTCCATaGATGAGGACCAGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGCTTSP*MRTRAP
Trigger: AGGGGCCCTGGTCCTCATCCATGGAGAAGTGGTACA...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGTCCTCAAGGCTATGTTaGGGCAGTAGGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGSSRLC*GSREAE
Trigger: CTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGA...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAGCCAGAACCCTTTGGTaGCTGAGAAGCCTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRARTLW*LRSLLK
Trigger: CTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTGGC...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp ACGGGGTCGTGGGCGTGCAGAGCGTGGCCAATTTTGTTGATGGATTTCTCCGGAAATATTGGCTGCTTCTaGAGCTGCGAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TGSWACRAWPILLMDFSGNIGCF*SCEGLR
Trigger: CCTGAGCCCCTCGCAGCTCCAGAAGCAGCCAATATT...TCCGGAGAAATCCATCAACAAAATTGGCCACGCTCTGCACGCCCACGACCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR TCA 90 bp GGCGTCCTGATGAGGGGAGACAATCCACTATCAGGGGAAGGAATGGAAGGTGGCTTGCAACCAGGAGGCTaGGCAAGGCACTGGTGTTTA +
Preference number: 4 (lower is better)
Translates to: GVLMRGDNPLSGEGMEGGLQPGG*ARHWCL
Trigger: TAAACACCAGTGCCTTGCTCAGCCTCCTGGTTGCAA...GCCACCTTCCATTCCTTCCCCTGATAGTGGATTGTCTCCCCTCATCAGGACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR TCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGATTGCAACCAGGAGGCTaGGCAAGGCACTGGTGTTTA +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRLQPGG*ARHWCL
Trigger: TAAACACCAGTGCCTTGCTCAGCCTCCTGGTTGCAA...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR TCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAACTTCACCGCCAAAGTaGGGTTGCTGCACCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRTSPPK*GCCTLK
Trigger: CTTCAAGGTGCAGCAACCTCACTTTGGCGGTGAAGT...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353176.9
ENST00000421063.6
CDS-3UTR TCA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGACTTCACCGCCAAAGTaGGGTTGCTTAAAGATGTAC +
Preference number: 4 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRTSPPK*GCLKMY
Trigger: GTACATCTTTAAGCAACCTCACTTTGGCGGTGAAGT...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372592.8
CDS-3UTR TCA 90 bp GGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACCCTTCACCGCCAAAGTaGGGTTGCTTAAAGATGTAC +
Preference number: 4 (lower is better)
Translates to: GMNQRQPFSSVASSTAIHPSPPK*GCLKMY
Trigger: GTACATCTTTAAGCAACCTCACTTTGGCGGTGAAGG...GTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR GCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGTCGCCAATCCTTTGTTaGATGGCCACACACTCTTCC +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQSPILC*MATHSS
Trigger: GGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGA...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp CACCTTGAAGGAGTGTGTGATGCTCTTGAAGACGGGGTCGTGGGCGTGCAGAGCTCGCCAATCCTTTGTTaGATGGCCACACACTCTTCC +
Preference number: 4 (lower is better)
Translates to: HLEGVCDALEDGVVGVQSSPILC*MATHSS
Trigger: GGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGA...GCTCTGCACGCCCACGACCCCGTCTTCAAGAGCATCACACACTCCTTCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR GCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGGGGTGGAGAATTCTGTaGGGCAGTGGAGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGGWRIL*GSGEEH
Trigger: ATGTTCCTCTCCACTGCCGCACAGAATTCTCCACCC...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAAAGATGTACATGCTCTaGACCACCACGGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRKMYML*TTTGIW
Trigger: CCAGATGCCCGTGGTGGTGCAGAGCATGTACATCTT...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
ENST00000442837.5
CDS-3UTR GCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTCAGAGAGGTTCTGCTTaGTCTTGTGTACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEAQRGSA*SCVPLL
Trigger: GAGAAGTGGTACACAAGAGCAAGCAGAACCTCTCTG...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGCGGTCAGAGAGGTTCTaGTTGCTCTTGTGTACCACT +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQRSERF*LLLCTT
Trigger: AGTGGTACACAAGAGCAAGCAGAACCTCTCTGACCG...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGGAATCCATCCTGTTaGAACTTCTGGAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQRNPSC*NFWSCE
Trigger: CTCGCAGCTCCAGAAGTTCCAACAGGATGGATTCCT...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGAATTCTGTGCGGCAGTaGAGAGGAACATCCATTTCA +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQNSVRQ*RGTSIS
Trigger: TGAAATGGATGTTCCTCTCCACTGCCGCACAGAATT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp GTGCAGAGCGTGGCCAATTTTGTTGATGGATTTCTCCGGAGGGACCAGGAAATTTTGAAGACGGGGTCGTaGGCGTGCAGAGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: VQSVANFVDGFLRRDQEILKTGS*ACRAWP
Trigger: TGGCCACGCTCTGCACGCCCACGACCCCGTCTTCAA...AATTTCCTGGTCCCTCCGGAGAAATCCATCAACAAAATTGGCCACGCTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAAAACTAGCCGAGCATaGTGGCAGGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGKTSRA*WQVPVV
Trigger: GACTACAGGCACCTGCCACCATGCTCGGCTAGTTTT...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CCA 90 bp ACAAGAATCCTTCCAGCACCAGGAATCCATCCTGTTGGAACTGCAGGCAGGCTTCCCCAACCCCAGGCATaGAGTCTGGCACCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: TRILPAPGIHPVGTAGRLPQPQA*SLAPSK
Trigger: TTTGCTGGGTGCCAGACTCCATGCCTGGGGTTGGGG...AAGCCTGCCTGCAGTTCCAACAGGATGGATTCCTGGTGCTGGAAGGATTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451000.5
3UTR CAA 72 bp ACGGGGTCGTGGGCGTGCAGAGCGTGGCCAATTTTGTaGATGGATTTCTCCGGAGGGACCAGGAAATTTCCT +
Preference number: 4 (lower is better)
Translates to: TGSWACRAWPIL*MDFSGGTRKFP
Trigger: AGGAAATTTCCTGGTCCCTCCGGAGAAATCCATCAACAAAATTGGCCACGCTCTGCACGCCCACGACCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR TCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAACCAGAGTTCCATCTaGGAGGAGAGGAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGNQSSI*EERRVR
Trigger: TCTCACTCTCCTCTCCTCTCAGATGGAACTCTGGTT...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGTCGCCAATCCTTTGTTaGATGGCCACACACTCTTCC +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGSPILC*MATHSS
Trigger: GGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGA...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGATCAAGAAATAGTCTGTaGTGCCCTGGGCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRSRNSL*CPGLEA
Trigger: AGCTTCGAGCCCAGGGCAGCACAGACTATTTCTTGA...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGTCAAGAAATAGTCTGTaGTGCCCTGGGCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGSRNSL*CPGLEA
Trigger: AGCTTCGAGCCCAGGGCAGCACAGACTATTTCTTGA...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGGAATCTTGTCACCACTaGTCAAGAAATAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQESCHH*SRNSLC
Trigger: GCACAGACTATTTCTTGAGCAGTGGTGACAAGATTC...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGCAGAGAGGTTCTGCTTaGTCTTGTGTACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQQRGSA*SCVPLL
Trigger: GAGAAGTGGTACACAAGAGCAAGCAGAACCTCTCTG...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGACGGTCAGAGAGGTTCTaGTTGCTCTTGTGTACCACT +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRRSERF*LLLCTT
Trigger: AGTGGTACACAAGAGCAAGCAGAACCTCTCTGACCG...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp AGCTGTTGGCTGGAGCCTGCAGAGGATAGAGGAGAAACAACCTTGAGGTGCAGGACAAGACCTCCCTGTTaGAACCAGGAGGCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: SCWLEPAEDRGETTLRCRTRPPC*NQEAEQ
Trigger: TTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGT...CCTGCACCTCAAGGTTGTTTCTCCTCTATCCTCTGCAGGCTCCAGCCAACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419872.1
CDS-3UTR GCA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGAGAGAATAACACTTaGACACCACCACCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLRENNT*TPPPFS
Trigger: TGAGAAGGGTGGTGGTGTGCAAGTGTTATTCTCTCT...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372592.8
CDS-3UTR CCA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAATTCTGTGCGGCAGTaGAGAGGAACATCCATTTCA +
Preference number: 4 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLNSVRQ*RGTSIS
Trigger: TGAAATGGATGTTCCTCTCCACTGCCGCACAGAATT...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CACACCACTGGTGTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTAATTCTGTGCGGCAGTaGAGAGGAACATCCATTTCA +
Preference number: 4 (lower is better)
Translates to: HTTGVGARDEPETAVLQRNSVRQ*RGTSIS
Trigger: TGAAATGGATGTTCCTCTCCACTGCCGCACAGAATT...ACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCACACCAGTGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR CCA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTAATTCTGTGCGGCAGTaGAGAGGAACATCCATTTCA +
Preference number: 4 (lower is better)
Translates to: QEESPGGETRPPCCNQEANSVRQ*RGTSIS
Trigger: TGAAATGGATGTTCCTCTCCACTGCCGCACAGAATT...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp CCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCAATTCTGTGCGGCAGTaGAGAGGAACATCCATTTCA +
Preference number: 4 (lower is better)
Translates to: PGMNQRQPFSSVASSTAINSVRQ*RGTSIS
Trigger: TGAAATGGATGTTCCTCTCCACTGCCGCACAGAATT...GATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR CCA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGATGGGCGTGCAGAGCGTaGCCAATTTTGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRWACRA*PILLMD
Trigger: ATCCATCAACAAAATTGGCCACGCTCTGCACGCCCA...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGTGGGCGTGCAGAGCGTaGCCAATTTTGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGWACRA*PILLMD
Trigger: ATCCATCAACAAAATTGGCCACGCTCTGCACGCCCA...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CCA 90 bp TGCTCAAGAAATAGTCTGTGCTGCCCTGTGGAAAGGGGACATCAGAGGACTGAGGACACACCACTGGTGTaGGAGCCAGGGATGAACCAG +
Preference number: 4 (lower is better)
Translates to: CSRNSLCCPVERGHQRTEDTPLV*EPGMNQ
Trigger: CTGGTTCATCCCTGGCTCCCACACCAGTGGTGTGTC...CTCAGTCCTCTGATGTCCCCTTTCCACAGGGCAGCACAGACTATTTCTTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
3UTR CAA 72 bp GTCCTGATGAGGGGAGACTTCACCGCCAAAGTGAGGTaGCTTAAAGATGTACATGCTCTGCACCACCACGGG +
Preference number: 4 (lower is better)
Translates to: VLMRGDFTAKVR*LKDVHALHHHG
Trigger: CCCGTGGTGGTGCAGAGCATGTACATCTTTAAGCAACCTCACTTTGGCGGTGAAGTCTCCCCTCATCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR GCA 90 bp GTGAGGTTGCTTAAAGATGTACATGCTCTGCACCACCACGGGCATCTGGAGGCCTCGCCAATCCTTTGTTaGATGGCCACACACTCTTCC +
Preference number: 4 (lower is better)
Translates to: VRLLKDVHALHHHGHLEASPILC*MATHSS
Trigger: GGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGA...GGCCTCCAGATGCCCGTGGTGGTGCAGAGCATGTACATCTTTAAGCAACCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR GCA 90 bp GACAAGAATCCTTCCAGCACCAGGAATCCATCCTGTTGGAACTGCAGGCAGGCTGGGTGGAGAATTCTGTaGGGCAGTGGAGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: DKNPSSTRNPSCWNCRQAGWRIL*GSGEEH
Trigger: ATGTTCCTCTCCACTGCCGCACAGAATTCTCCACCC...AGCCTGCCTGCAGTTCCAACAGGATGGATTCCTGGTGCTGGAAGGATTCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR GCA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTGAATCTTGTCACCACTaGTCAAGAAATAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTESCHH*SRNSLC
Trigger: GCACAGACTATTTCTTGAGCAGTGGTGACAAGATTC...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp AGACAAGAATCCTTCCAGCACCAGGAATCCATCCTGTTGGAACTGCAGGCAGGCAAGATGTACATGCTCTaGACCACCACGGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: RQESFQHQESILLELQAGKMYML*TTTGIW
Trigger: CCAGATGCCCGTGGTGGTGCAGAGCATGTACATCTT...GCCTGCCTGCAGTTCCAACAGGATGGATTCCTGGTGCTGGAAGGATTCTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR GCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGCAGAGAGGTTCTGCTTaGTCTTGTGTACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGQRGSA*SCVPLL
Trigger: GAGAAGTGGTACACAAGAGCAAGCAGAACCTCTCTG...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR GCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAAGATCTGAGAACCATTaGTGTCTTAGATGTCCCACC +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTRSENH*CLRCPT
Trigger: GGTGGGACATCTAAGACAGCAATGGTTCTCAGATCT...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR GCA 90 bp TCCTCTTCCTGGGTGGAGAATTCTGTGCGGCAGTGGAGAGGAACATCCATTTCAACCAGGTATCTTGTTTaGTGCCCTGTCCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: SSSWVENSVRQWRGTSISTRYLV*CPVPNP
Trigger: GGGGTTGGGGACAGGGCAGCAAACAAGATACCTGGT...TGAAATGGATGTTCCTCTCCACTGCCGCACAGAATTCTCCACCCAGGAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CCA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAAATTCTGTGCGGCAGTaGAGAGGAACATCCATTTCA +
Preference number: 4 (lower is better)
Translates to: REVKILGKPLTQPRLLPTNSVRQ*RGTSIS
Trigger: TGAAATGGATGTTCCTCTCCACTGCCGCACAGAATT...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CCA 90 bp TCTGGCCAAGGTCTGCACCTTGAAGGAGTGTGTGATGCTCTTGAAGACGGGGTCTGGGCGTGCAGAGCGTaGCCAATTTTGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: SGQGLHLEGVCDALEDGVWACRA*PILLMD
Trigger: ATCCATCAACAAAATTGGCCACGCTCTGCACGCCCA...GACCCCGTCTTCAAGAGCATCACACACTCCTTCAAGGTGCAGACCTTGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CCA 90 bp TCCTCTTCCTGGGTGGAGAATTCTGTGCGGCAGTGGAGAGGAACATCCATTTCACCCAGGCATGGAGTCTaGCACCCAGCAAAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: SSSWVENSVRQWRGTSISPRHGV*HPAKSN
Trigger: ATTGCTCTTTGCTGGGTGCCAGACTCCATGCCTGGG...TGAAATGGATGTTCCTCTCCACTGCCGCACAGAATTCTCCACCCAGGAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR GCA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGGAATCTTGTCACCACTaGTCAAGAAATAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQESCHH*SRNSLC
Trigger: GCACAGACTATTTCTTGAGCAGTGGTGACAAGATTC...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp AGCTGTTGGCTGGAGCCTGCAGAGGATAGAGGAGAAACAACCTTGAGGTGCAGGCAGAGAGGTTCTGCTTaGTCTTGTGTACCACTTCTC +
Preference number: 4 (lower is better)
Translates to: SCWLEPAEDRGETTLRCRQRGSA*SCVPLL
Trigger: GAGAAGTGGTACACAAGAGCAAGCAGAACCTCTCTG...CCTGCACCTCAAGGTTGTTTCTCCTCTATCCTCTGCAGGCTCCAGCCAACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419872.1
CDS-3UTR GCA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGGAATCTTGTCACCACTaGTCAAGAAATAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGESCHH*SRNSLC
Trigger: GCACAGACTATTTCTTGAGCAGTGGTGACAAGATTC...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR GCA 90 bp TCTGGCCAAGGTCTGCACCTTGAAGGAGTGTGTGATGCTCTTGAAGACGGGGTCGAATCTTGTCACCACTaGTCAAGAAATAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SGQGLHLEGVCDALEDGVESCHH*SRNSLC
Trigger: GCACAGACTATTTCTTGAGCAGTGGTGACAAGATTC...GACCCCGTCTTCAAGAGCATCACACACTCCTTCAAGGTGCAGACCTTGGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CCA 90 bp GACAAGAATCCTTCCAGCACCAGGAATCCATCCTGTTGGAACTGCAGGCAGGCTAATTCTGTGCGGCAGTaGAGAGGAACATCCATTTCA +
Preference number: 4 (lower is better)
Translates to: DKNPSSTRNPSCWNCRQANSVRQ*RGTSIS
Trigger: TGAAATGGATGTTCCTCTCCACTGCCGCACAGAATT...AGCCTGCCTGCAGTTCCAACAGGATGGATTCCTGGTGCTGGAAGGATTCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CCA 90 bp AATTTTGTTGATGGATTTCTCCGGAGGGACCAGGAAATTTCCTTTCTCATCAAATCCTGGGGTCAGAGCTaGGCCTGGGCTCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: NFVDGFLRRDQEISFLIKSWGQS*AWARSC
Trigger: GCAGCTTCGAGCCCAGGCCCAGCTCTGACCCCAGGA...TTTGATGAGAAAGGAAATTTCCTGGTCCCTCCGGAGAAATCCATCAACAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR CCA 90 bp GACAAGAATCCTTCCAGCACCAGGAATCCATCCTGTTGGAACTGCAGGCAGGCTAAGAGCAATCAATATTaGCTGCTTCTGGAGCTGCGA +
Preference number: 4 (lower is better)
Translates to: DKNPSSTRNPSCWNCRQAKSNQY*LLLELR
Trigger: TCGCAGCTCCAGAAGCAGCCAATATTGATTGCTCTT...AGCCTGCCTGCAGTTCCAACAGGATGGATTCCTGGTGCTGGAAGGATTCTTGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CCA 90 bp AATTTTGTTGATGGATTTCTCCGGAGGGACCAGGAAATTTCCTTTCTCATCAAATTGAAGACGGGGTCGTaGGCGTGCAGAGCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: NFVDGFLRRDQEISFLIKLKTGS*ACRAWP
Trigger: TGGCCACGCTCTGCACGCCCACGACCCCGTCTTCAA...TTTGATGAGAAAGGAAATTTCCTGGTCCCTCCGGAGAAATCCATCAACAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
3UTR CAA 72 bp AGGAACATCCATTTCAGCCACTATCTCGCCAATCCTTaGTTGCATGGCCACACACTCTTCCGCAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: RNIHFSHYLANP*LHGHTLFRRQE
Trigger: TTCTTGTCTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATAGTGGCTGAAATGGATGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR TCA 90 bp CTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAAGAAATAGTCTGTGCAACTGCAGGCAGGCTTaGGACTCAGGCTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LSQRRIESCHHCSRNSLCNCRQA*DSGFPS
Trigger: ACTGGGGAAGCCTGAGTCTCAAGCCTGCCTGCAGTT...GCACAGACTATTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CCA 90 bp TTTCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTAGCCGTTCTCCAGCGTaGCATCCTCCACTGCGATCC +
Preference number: 4 (lower is better)
Translates to: FLIKNAFLKEESNLVTTASRSPA*HPPLRS
Trigger: GGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCT...AGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR TCA 90 bp AATTTTGTTGATGGATTTCTCCGGAGGGACCAGGAAATTTCCTTTCTCATCAAACCGGACCATCCTTCTTaGCACACCACTGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: NFVDGFLRRDQEISFLIKPDHPS*HTTGVG
Trigger: TCCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGG...TTTGATGAGAAAGGAAATTTCCTGGTCCCTCCGGAGAAATCCATCAACAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR CCA 90 bp CTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAAGAAATAGTCTGTGCGCTCCTCTTCCTGGGTaGAGAATTCTGTGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: LSQRRIESCHHCSRNSLCAPLPG*RILCGS
Trigger: ACTGCCGCACAGAATTCTCCACCCAGGAAGAGGAGC...GCACAGACTATTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CCA 90 bp TTTCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCTGACCCAAGGAAGCTaGTACCAGGCGCTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: FLIKNAFLKEESNLVTTALTQGS*YQALSQ
Trigger: TTGGCTCAGCGCCTGGTACCAGCTTCCTTGGGTCAG...AGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR GCA 90 bp TCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAGGGTGGAGAATTCTGTaGGGCAGTGGAGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: SHQKRLSQRRIESCHHCSGWRIL*GSGEEH
Trigger: ATGTTCCTCTCCACTGCCGCACAGAATTCTCCACCC...TGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR GCA 90 bp AACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAAGAAATAGTCAAGATGTACATGCTCTaGACCACCACGGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: NAFLKEESNLVTTAQEIVKMYML*TTTGIW
Trigger: CCAGATGCCCGTGGTGGTGCAGAGCATGTACATCTT...GACTATTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR GCA 90 bp TCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAAGAAATCCCCAGTCTGCAAATaGTCCTGTCTGACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SKTPFSKKNRILSPLLKKSPVCK*SCLTLP
Trigger: GGGAAGGGTCAGACAGGAGCATTTGCAGACTGGGGA...TTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR TCA 90 bp TTCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCCGTGGCCAATTTTGTTaGTGGATTTCTCCGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FSSKTPFSKKNRILSPLLRGQFC*WISPEG
Trigger: TCCCTCCGGAGAAATCCATCAACAAAATTGGCCACG...GAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR GCA 90 bp CTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAAGAAATAGTCTGTGCTCAAGAAATAGTCTGTaGTGCCCTGGGCTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: LSQRRIESCHHCSRNSLCSRNSL*CPGLEA
Trigger: AGCTTCGAGCCCAGGGCAGCACAGACTATTTCTTGA...GCACAGACTATTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR GCA 90 bp TTCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAGAAATAGTCTGTGCTaGCCTGTGGAAAGGGGACAT +
Preference number: 4 (lower is better)
Translates to: FSSKTPFSKKNRILSPLLRNSLC*PVERGH
Trigger: ATGTCCCCTTTCCACAGGGCAGCACAGACTATTTCT...GAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR GCA 90 bp AATTTCCTTTCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCCCTTCCCTCAACCTTaGAGCTGTGTGAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: NFLSHQKRLSQRRIESCHPFPQP*SCVKVG
Trigger: TCCCACCTTCACACAGCTGCAAGGTTGAGGGAAGGG...GTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGAAAGGAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CCA 90 bp AATTTTGTTGATGGATTTCTCCGGAGGGACCAGGAAATTTCCTTTCTCATCAAATGGGCGTGCAGAGCGTaGCCAATTTTGTTGATGGAT +
Preference number: 4 (lower is better)
Translates to: NFVDGFLRRDQEISFLIKWACRA*PILLMD
Trigger: ATCCATCAACAAAATTGGCCACGCTCTGCACGCCCA...TTTGATGAGAAAGGAAATTTCCTGGTCCCTCCGGAGAAATCCATCAACAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR GCA 90 bp AATTTTGTTGATGGATTTCTCCGGAGGGACCAGGAAATTTCCTTTCTCATCAAATCAAGAAATAGTCTGTaGTGCCCTGTGGAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: NFVDGFLRRDQEISFLIKSRNSL*CPVERG
Trigger: TCCCCTTTCCACAGGGCAGCACAGACTATTTCTTGA...TTTGATGAGAAAGGAAATTTCCTGGTCCCTCCGGAGAAATCCATCAACAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR TCA 90 bp TTTCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTACTTCACCGCCAAAGTaGGGTTGCTTAAAGATGTAC +
Preference number: 4 (lower is better)
Translates to: FLIKNAFLKEESNLVTTATSPPK*GCLKMY
Trigger: GTACATCTTTAAGCAACCTCACTTTGGCGGTGAAGT...AGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR GCA 90 bp CTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAAGAAATAGTCTGTGCGAATCTTGTCACCACTaGTCAAGAAATAGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LSQRRIESCHHCSRNSLCESCHH*SRNSLC
Trigger: GCACAGACTATTTCTTGAGCAGTGGTGACAAGATTC...GCACAGACTATTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CCA 90 bp AATTTCCTTTCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCAATCCTTTGTTGCATaGCCACACACTCTTCCGCAG +
Preference number: 4 (lower is better)
Translates to: NFLSHQKRLSQRRIESCHQSFVA*PHTLPQ
Trigger: CTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTG...GTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGAAAGGAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS CCA 90 bp GGAGCTGCGAGGGGCTCAGGCAGGCCATGGAGACGCTCAGGGCACTaGGCGGCTTCTAAGCGCGGCCTCCAGGTGCCGGGAAATTATGCT +
Preference number: 5 (lower is better)
Translates to: GAARGSGRPWRRSGH*AASKRGLQVPGNYA
Trigger: AGCATAATTTCCCGGCACCTGGAGGCCGCGCTTAGAAGCCGCCCAGTGCCCTGAGCGTCTCCATGGCCTGCCTGAGCCCCTCGCAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419552.5
ENST00000426694.5
ENST00000428610.5
CDS CCA 90 bp TCCTCAGGCCCAAGATACTTGGCATCTCAAGTCGGGCTGGCACAGTaGAGCTGGGGTCAGAACAACACCTGCAGGCCGGGTGCGGCGGCT +
Preference number: 5 (lower is better)
Translates to: SSGPRYLASQVGLAQ*SWGQNNTCRPGAAA
Trigger: AGCCGCCGCACCCGGCCTGCAGGTGTTGTTCTGACCCCAGCTCCACTGTGCCAGCCCGACTTGAGATGCCAAGTATCTTGGGCCTGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CAA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCACCACCCTTCTCAGCTaGCCCTGCTCAGCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: GAVGRQRGEDLREAPDPATTLLS*PCSAAG
Trigger: GCCAGCTGCTGAGCAGGGCAAGCTGAGAAGGGTGGT...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372592.8
CDS-3UTR CAA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGTGTAATCCCAGCACTTaGGAGGCAGAGGCGCGCGGA +
Preference number: 5 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRCNPST*EAEARG
Trigger: TCCGCGCGCCTCTGCCTCCAAAGTGCTGGGATTACA...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CAA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGGAGTGTGTGATGCTCTaGAAGACGGGGTCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQECVML*KTGSWA
Trigger: CGCCCACGACCCCGTCTTCAAGAGCATCACACACTC...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCGAGTGTGTGATGCTCTaGAAGACGGGGTCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAECVML*KTGSWA
Trigger: CGCCCACGACCCCGTCTTCAAGAGCATCACACACTC...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp GGTGTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCCCGGACCATCCTTCTaGACACACCACTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: GVGARDEPETAVLQRGILPGPSF*THHWCG
Trigger: CCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGGG...GAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR CAA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACCCGGACCATCCTTCTaGACACACCACTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: AQEGRQDLPVATRRLSKAPGPSF*THHWCG
Trigger: CCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGGG...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS TCA 90 bp GTGGGCAGAAGAGACAGGGTTCCTCACTGGTGTGGGAGCCAGGGATaGACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGA +
Preference number: 5 (lower is better)
Translates to: VGRRDRVPHWCGSQG*TRDSRSPAWHPPLR
Trigger: TCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCACACCAGTGAGGAACCCTGTCTCTTCTGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487504.1
CDS-3UTR CAA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGTGTAATCCCAGCACTTaGGAGGCAGAGGCGCGCGGA +
Preference number: 5 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLCNPST*EAEARG
Trigger: TCCGCGCGCCTCTGCCTCCAAAGTGCTGGGATTACA...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CAA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGGAGTGTGTGATGCTCTaGAAGACGGGGTCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLECVML*KTGSWA
Trigger: CGCCCACGACCCCGTCTTCAAGAGCATCACACACTC...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp CACGGGCATCTGGAGGCCCAGACTTCTGGCCAAGGTCTGCACCTTGAAGGAGTGGAGTGTGTGATGCTCTaGAAGACGGGGTCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: HGHLEAQTSGQGLHLEGVECVML*KTGSWA
Trigger: CGCCCACGACCCCGTCTTCAAGAGCATCACACACTC...CACTCCTTCAAGGTGCAGACCTTGGCCAGAAGTCTGGGCCTCCAGATGCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CAA 90 bp AGACAGCCGTTCTCCAGCGTGGCATCCTCCACTGCGATCCACACGCCCAGCACCGCCAAGGTCTGCACCTaGAAGGAGTGTGTGATGCTC +
Preference number: 5 (lower is better)
Translates to: RQPFSSVASSTAIHTPSTAKVCT*KECVML
Trigger: GAGCATCACACACTCCTTCAAGGTGCAGACCTTGGC...GGTGCTGGGCGTGTGGATCGCAGTGGAGGATGCCACGCTGGAGAACGGCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR CAA 90 bp GGGCTCCGTGTACAGGAAGGAGGCGTCCTGATGAGGGGAGACTTCACCGCCAAACCCGGACCATCCTTCTaGACACACCACTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: GLRVQEGGVLMRGDFTAKPGPSF*THHWCG
Trigger: CCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGGG...TTTGGCGGTGAAGTCTCCCCTCATCAGGACGCCTCCTTCCTGTACACGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR CAA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTAGGGCAGTTCAGCTGTaGGCTGGAGCCTGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: QEESPGGETRPPCCNQEARAVQL*AGACRG
Trigger: TCCTCTGCAGGCTCCAGCCAACAGCTGAACTGCCCT...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
CDS GCA 90 bp GTCCCAGTCCAGGCGCCGCCATTCCCTGTGACTCTGAGGAACGCCTaGCTCTCTCTAGGCCTCAATCCTCAGGCCCAAGATACTTGGCAT +
Preference number: 5 (lower is better)
Translates to: VPVQAPPFPVTLRNA*LSLGLNPQAQDTWH
Trigger: ATGCCAAGTATCTTGGGCCTGAGGATTGAGGCCTAGAGAGAGGCAGGCGTTCCTCAGAGTCACAGGGAATGGCGGCGCCTGGACTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS GCA 90 bp CCCTCAACCTTGCAGCTGTGTGAAGGTGGGACCAGGTATCTTGTTTaGTGCCCTGTCCCCAACCCCAGGCATGGAGTCTGGCACCCAGCA +
Preference number: 5 (lower is better)
Translates to: PSTLQLCEGGTRYLV*CPVPNPRHGVWHPA
Trigger: TGCTGGGTGCCAGACTCCATGCCTGGGGTTGGGGACAGGGCAGCAAACAAGATACCTGGTCCCACCTTCACACAGCTGCAAGGTTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CAA 90 bp CTCCATGAGGTGGAAAGTGTAGGCCTGGCGCGAGCGGTCAGAGAGGTTCTGCTTTGTAATCCCAGCACTTaGGAGGCAGAGGCGCGCGGA +
Preference number: 5 (lower is better)
Translates to: LHEVESVGLARAVREVLLCNPST*EAEARG
Trigger: TCCGCGCGCCTCTGCCTCCAAAGTGCTGGGATTACA...AAGCAGAACCTCTCTGACCGCTCGCGCCAGGCCTACACTTTCCACCTCATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CAA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCATCAGGCCCAAGATACTaGGCATCTCAAGTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: AQEGRQDLPVATRRLSKASGPRY*ASQVGL
Trigger: CAGCCCGACTTGAGATGCCAAGTATCTTGGGCCTGA...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CAA 90 bp GGGGAAAGGGCAGTTCAGCTGTTGGCTGGAGCCAGTTCTCCGGGCTCCAGGTGGGCGTGGCCAATTTTGTaGATGGATTTCTCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: GERAVQLLAGASSPGSRWAWPIL*MDFSGG
Trigger: CCCTCCGGAGAAATCCATCAACAAAATTGGCCACGC...CCACCTGGAGCCCGGAGAACTGGCTCCAGCCAACAGCTGAACTGCCCTTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CAA 90 bp CTCTGCACCACCACGGGCATCTGGAGGCCCAGACTTCTGGCCAAGGTCTGCACCGCGTGGCCAATTTTGTaGATGGATTTCTCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: LCTTTGIWRPRLLAKVCTAWPIL*MDFSGG
Trigger: CCCTCCGGAGAAATCCATCAACAAAATTGGCCACGC...GGTGCAGACCTTGGCCAGAAGTCTGGGCCTCCAGATGCCCGTGGTGGTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CAA 90 bp GCTGGCTCTGACCCAAGGAAGCTGGTACCAGGCGCTGAGCCAACAGGGGCCCGGAGAGCGTGGCCAATTTaGTTGATGGATTTCTCCGGA +
Preference number: 5 (lower is better)
Translates to: AGSDPRKLVPGAEPTGARRAWPI*LMDFSG
Trigger: TCCGGAGAAATCCATCAACAAAATTGGCCACGCTCT...CCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGCTTCCTTGGGTCAGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR CAA 90 bp CTCCATGAGGTGGAAAGTGTAGGCCTGGCGCGAGCGGTCAGAGAGGTTCTGCTTGAGTGTGTGATGCTCTaGAAGACGGGGTCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: LHEVESVGLARAVREVLLECVML*KTGSWA
Trigger: CGCCCACGACCCCGTCTTCAAGAGCATCACACACTC...AAGCAGAACCTCTCTGACCGCTCGCGCCAGGCCTACACTTTCCACCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CAA 90 bp GGCATCTGGAGGCCCAGACTTCTGGCCAAGGTCTGCACCTTGAAGGAGTGTGTGGAGTGTGTGATGCTCTaGAAGACGGGGTCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: GIWRPRLLAKVCTLKECVECVML*KTGSWA
Trigger: CGCCCACGACCCCGTCTTCAAGAGCATCACACACTC...CACACACTCCTTCAAGGTGCAGACCTTGGCCAGAAGTCTGGGCCTCCAGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CAA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGAGTGTGTGATGCTCTaGAAGACGGGGTCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: REVKILGKPLTQPRLLPTECVML*KTGSWA
Trigger: CGCCCACGACCCCGTCTTCAAGAGCATCACACACTC...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGGCCAAGGTCTGCACCTaGAAGGAGTGTGTGATGCTC +
Preference number: 5 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRAKVCT*KECVML
Trigger: GAGCATCACACACTCCTTCAAGGTGCAGACCTTGGC...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
ENST00000442837.5
CDS-3UTR CAA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACACCCGGACCATCCTTCTaGACACACCACTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: REVKILGKPLTQPRLLPTPGPSF*THHWCG
Trigger: CCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGGG...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGACCGCCAAAGTGAGGTaGCTGCACCTTGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRTAKVR*LHLEGV
Trigger: CACTCCTTCAAGGTGCAGCAACCTCACTTTGGCGGT...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353176.9
ENST00000421063.6
CDS CCA 90 bp GTAATGGGCATTCCAAAGGTGGAAGAGGTCCTGGGGAGAACTATCTaGGCCCCTCCCAGCACCGATCTGAAACCCTCTCGGTCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: VMGIPKVEEVLGRTI*APPSTDLKPSRSWE
Trigger: CTCCCAGGACCGAGAGGGTTTCAGATCGGTGCTGGGAGGGGCCCAGATAGTTCTCCCCAGGACCTCTTCCACCTTTGGAATGCCCATTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426694.5
CDS-3UTR CAA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGCAGGAATCCATCCTGTaGGAACTTCTGGAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQQESIL*ELLELR
Trigger: TCGCAGCTCCAGAAGTTCCAACAGGATGGATTCCTG...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp CTCTGCACTGGGGTGGGCACAAAGAGGCTGTTATCCCGGGCTGGCTCTGACCCACAGGAATCCATCCTGTaGGAACTTCTGGAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: LCTGVGTKRLLSRAGSDPQESIL*ELLELR
Trigger: TCGCAGCTCCAGAAGTTCCAACAGGATGGATTCCTG...TGGGTCAGAGCCAGCCCGGGATAACAGCCTCTTTGTGCCCACCCCAGTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CAA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTCGCCAATCCTTTGTaGCATGGCCACACACTCTTC +
Preference number: 5 (lower is better)
Translates to: AQEGRQDLPVATRRLSKALANPL*HGHTLF
Trigger: GAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAG...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGGCGTGGCCAATTTTGTaGATGGATTTCTCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRAWPIL*MDFSGG
Trigger: CCCTCCGGAGAAATCCATCAACAAAATTGGCCACGC...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAGAGTGTGTGATGCTCTaGAAGACGGGGTCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRECVML*KTGSWA
Trigger: CGCCCACGACCCCGTCTTCAAGAGCATCACACACTC...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGACCCGGACCATCCTTCTaGACACACCACTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRPGPSF*THHWCG
Trigger: CCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGGG...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCCCTTTAGGTGTACAGTaGGGGAAAGGGCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAPLGVQ*GKGQFS
Trigger: GCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGG...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACCTTTAGGTGTACAGTaGGGGAAAGGGCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: AQEGRQDLPVATRRLSKAPLGVQ*GKGQFS
Trigger: GCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGG...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTACCGCCAAAGTGAGGTaGCTGCACCTTGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTTAKVR*LHLEGV
Trigger: CACTCCTTCAAGGTGCAGCAACCTCACTTTGGCGGT...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353176.9
ENST00000421063.6
CDS CCA 90 bp AACGCCTGCCTCTCTCTAGGCCTCAATCCTCAGGCCCAAGATACTTaGCATCTCAAGTCGGGCTGGCACAGTGGAGCTGGGGTCAGAACA +
Preference number: 5 (lower is better)
Translates to: NACLSLGLNPQAQDT*HLKSGWHSGAGVRT
Trigger: TGTTCTGACCCCAGCTCCACTGTGCCAGCCCGACTTGAGATGCCAAGTATCTTGGGCCTGAGGATTGAGGCCTAGAGAGAGGCAGGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CAA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTCAGGAATCCATCCTGTaGGAACTTCTGGAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTQESIL*ELLELR
Trigger: TCGCAGCTCCAGAAGTTCCAACAGGATGGATTCCTG...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTATCTCGCCAATCCTTaGTTGCATGGCCACACACTC +
Preference number: 5 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAYLANP*LHGHTL
Trigger: GAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATA...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTGCGTGGCCAATTTTGTaGATGGATTTCTCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTAWPIL*MDFSGG
Trigger: CCCTCCGGAGAAATCCATCAACAAAATTGGCCACGC...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGCGTGGCCAATTTTGTaGATGGATTTCTCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: QEESPGGETRPPCCNQEAAWPIL*MDFSGG
Trigger: CCCTCCGGAGAAATCCATCAACAAAATTGGCCACGC...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp CCAACAGGGGCCCGGACCATCCTTCTTGACACACCACTGGTGTGGGAGCCAGGGAGAGCGTGGCCAATTTaGTTGATGGATTTCTCCGGA +
Preference number: 5 (lower is better)
Translates to: PTGARTILLDTPLVWEPGRAWPI*LMDFSG
Trigger: TCCGGAGAAATCCATCAACAAAATTGGCCACGCTCT...CCCTGGCTCCCACACCAGTGGTGTGTCAAGAAGGATGGTCCGGGCCCCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR CAA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGCCAAGGTCTGCACCTaGAAGGAGTGTGTGATGCTC +
Preference number: 5 (lower is better)
Translates to: REVKILGKPLTQPRLLPTAKVCT*KECVML
Trigger: GAGCATCACACACTCCTTCAAGGTGCAGACCTTGGC...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
ENST00000442837.5
CDS-3UTR CAA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCAGGTTCTGCTTGCTCTaGTGTACCACTTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: GAVGRQRGEDLREAPDPARFCLL*CTTSPW
Trigger: CCATGGAGAAGTGGTACACAAGAGCAAGCAGAACCT...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp GCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCAAGGTTCTGCTTGCTCTaGTGTACCACTTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: AQEGRQDLPVATRRLSKARFCLL*CTTSPW
Trigger: CCATGGAGAAGTGGTACACAAGAGCAAGCAGAACCT...TGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTCCTTTAGGTGTACAGTaGGGGAAAGGGCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTPLGVQ*GKGQFS
Trigger: GCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGG...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp AGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGCCTTTAGGTGTACAGTaGGGGAAAGGGCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: RRKAQEGRQDLPVATRRLPLGVQ*GKGQFS
Trigger: GCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGG...CAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp ACTGGTGTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCCTTTAGGTGTACAGTaGGGGAAAGGGCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: TGVGARDEPETAVLQRGIPLGVQ*GKGQFS
Trigger: GCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGG...GATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCACACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS TCA 90 bp CTGCAAATGCTCCTGTCTGACCCTTCCCTCAACCTTGCAGCTGTGTaGAGGTGGGACCAGGTATCTTGTTTGCTGCCCTGTCCCCAACCC +
Preference number: 5 (lower is better)
Translates to: LQMLLSDPSLNLAAV*RWDQVSCLLPCPQP
Trigger: GGGTTGGGGACAGGGCAGCAAACAAGATACCTGGTCCCACCTTCACACAGCTGCAAGGTTGAGGGAAGGGTCAGACAGGAGCATTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CAA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGTCAGGCCCAAGATACTaGGCATCTCAAGTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGSGPRY*ASQVGL
Trigger: CAGCCCGACTTGAGATGCCAAGTATCTTGGGCCTGA...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CAA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACACTCGCCAATCCTTTGTaGCATGGCCACACACTCTTC +
Preference number: 5 (lower is better)
Translates to: REVKILGKPLTQPRLLPTLANPL*HGHTLF
Trigger: GAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAG...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp GGAGACAATCCACTATCAGGGGAAGGAATGGAAGGTGGCTCCTCCTCTCCGGGCCTCGCCAATCCTTTGTaGCATGGCCACACACTCTTC +
Preference number: 5 (lower is better)
Translates to: GDNPLSGEGMEGGSSSPGLANPL*HGHTLF
Trigger: GAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAG...GCCCGGAGAGGAGGAGCCACCTTCCATTCCTTCCCCTGATAGTGGATTGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CAA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGCTCGCCAATCCTTTGTaGCATGGCCACACACTCTTC +
Preference number: 5 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQLANPL*HGHTLF
Trigger: GAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAG...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTTATCTCGCCAATCCTTaGTTGCATGGCCACACACTC +
Preference number: 5 (lower is better)
Translates to: QEESPGGETRPPCCNQEAYLANP*LHGHTL
Trigger: GAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATA...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGAGAGCGTGGCCAATTTaGTTGATGGATTTCTCCGGA +
Preference number: 5 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRRAWPI*LMDFSG
Trigger: TCCGGAGAAATCCATCAACAAAATTGGCCACGCTCT...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGAGAGCGTGGCCAATTTaGTTGATGGATTTCTCCGGA +
Preference number: 5 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQRAWPI*LMDFSG
Trigger: TCCGGAGAAATCCATCAACAAAATTGGCCACGCTCT...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAGCCAAGGTCTGCACCTaGAAGGAGTGTGTGATGCTC +
Preference number: 5 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRAKVCT*KECVML
Trigger: GAGCATCACACACTCCTTCAAGGTGCAGACCTTGGC...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
ENST00000442837.5
CDS-3UTR CAA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGAGGTTCTGCTTGCTCTaGTGTACCACTTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: GGREVKILGKPLTQPRLLRFCLL*CTTSPW
Trigger: CCATGGAGAAGTGGTACACAAGAGCAAGCAGAACCT...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp CAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTAGGTTCTGCTTGCTCTaGTGTACCACTTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: QEESPGGETRPPCCNQEARFCLL*CTTSPW
Trigger: CCATGGAGAAGTGGTACACAAGAGCAAGCAGAACCT...AGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp GTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACAGGGCAGTCAGAGAGGTTCTGCTaGCTCTTGTGTACCACTTCT +
Preference number: 5 (lower is better)
Translates to: VKILGKPLTQPRLLPTGQSERFC*LLCTTS
Trigger: AGAAGTGGTACACAAGAGCAAGCAGAACCTCTCTGA...CTGCCCTGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp GGCAGGAGGAAAGCCCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGTCAGAGAGGTTCTGCTaGCTCTTGTGTACCACTTCT +
Preference number: 5 (lower is better)
Translates to: GRRKAQEGRQDLPVATRRSERFC*LLCTTS
Trigger: AGAAGTGGTACACAAGAGCAAGCAGAACCTCTCTGA...CCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGGGCTTTCCTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp AGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGCCCACACCTTTAGGTGTACAGTaGGGGAAAGGGCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: REVKILGKPLTQPRLLPTPLGVQ*GKGQFS
Trigger: GCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGG...TGTGGGCAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS TCA 90 bp CCTTTTCAGGGGCCCACAGCTCTCAGCTCACCTTCACCGCCAAAGTaGGGTTGCTTAAAGATGTACATGCTCTGCACCACCACGGGCATC +
Preference number: 5 (lower is better)
Translates to: PFQGPTALSSPSPPK*GCLKMYMLCTTTGI
Trigger: GATGCCCGTGGTGGTGCAGAGCATGTACATCTTTAAGCAACCTCACTTTGGCGGTGAAGGTGAGCTGAGAGCTGTGGGCCCCTGAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CAA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGCAGGAATCCATCCTGTaGGAACTTCTGGAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGQESIL*ELLELR
Trigger: TCGCAGCTCCAGAAGTTCCAACAGGATGGATTCCTG...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp CTCCATGAGGTGGAAAGTGTAGGCCTGGCGCGAGCGGTCAGAGAGGTTCTGCTTTATCTCGCCAATCCTTaGTTGCATGGCCACACACTC +
Preference number: 5 (lower is better)
Translates to: LHEVESVGLARAVREVLLYLANP*LHGHTL
Trigger: GAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATA...AAGCAGAACCTCTCTGACCGCTCGCGCCAGGCCTACACTTTCCACCTCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CAA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAGCGTGGCCAATTTTGTaGATGGATTTCTCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRAWPIL*MDFSGG
Trigger: CCCTCCGGAGAAATCCATCAACAAAATTGGCCACGC...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGAGAGCGTGGCCAATTTaGTTGATGGATTTCTCCGGA +
Preference number: 5 (lower is better)
Translates to: GGREVKILGKPLTQPRLLRAWPI*LMDFSG
Trigger: TCCGGAGAAATCCATCAACAAAATTGGCCACGCTCT...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp ACCACGGGCATCTGGAGGCCCAGACTTCTGGCCAAGGTCTGCACCTTGAAGGAGAGAGCGTGGCCAATTTaGTTGATGGATTTCTCCGGA +
Preference number: 5 (lower is better)
Translates to: TTGIWRPRLLAKVCTLKERAWPI*LMDFSG
Trigger: TCCGGAGAAATCCATCAACAAAATTGGCCACGCTCT...CTCCTTCAAGGTGCAGACCTTGGCCAGAAGTCTGGGCCTCCAGATGCCCGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CAA 90 bp GGAGACAATCCACTATCAGGGGAAGGAATGGAAGGTGGCTCCTCCTCTCCGGGCAGGTTCTGCTTGCTCTaGTGTACCACTTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: GDNPLSGEGMEGGSSSPGRFCLL*CTTSPW
Trigger: CCATGGAGAAGTGGTACACAAGAGCAAGCAGAACCT...GCCCGGAGAGGAGGAGCCACCTTCCATTCCTTCCCCTGATAGTGGATTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CAA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGGTTCTGCTTGCTCTaGTGTACCACTTCTCCATGG +
Preference number: 5 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQRFCLL*CTTSPW
Trigger: CCATGGAGAAGTGGTACACAAGAGCAAGCAGAACCT...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp GGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCTAGGCTGCTGTCAGAGAGGTTCTGCTaGCTCTTGTGTACCACTTCT +
Preference number: 5 (lower is better)
Translates to: GGREVKILGKPLTQPRLLSERFC*LLCTTS
Trigger: AGAAGTGGTACACAAGAGCAAGCAGAACCTCTCTGA...CAGCAGCCTAGGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGCCTTTAGGTGTACAGTaGGGGAAAGGGCAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGPLGVQ*GKGQFS
Trigger: GCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGG...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419872.1
ENST00000421063.6
ENST00000442837.5
CDS CCA 90 bp AGGTATCTTGTTTGCTGCCCTGTCCCCAACCCCAGGCATGGAGTCTaGCACCCAGCAAAGAGCAATCAATATTGGCTGCTTCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: RYLVCCPVPNPRHGV*HPAKSNQYWLLLEL
Trigger: CAGCTCCAGAAGCAGCCAATATTGATTGCTCTTTGCTGGGTGCCAGACTCCATGCCTGGGGTTGGGGACAGGGCAGCAAACAAGATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS CCA 90 bp TGGGACCAGGTATCTTGTTTGCTGCCCTGTCCCCAACCCCAGGCATaGAGTCTGGCACCCAGCAAAGAGCAATCAATATTGGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: WDQVSCLLPCPQPQA*SLAPSKEQSILAAS
Trigger: AGAAGCAGCCAATATTGATTGCTCTTTGCTGGGTGCCAGACTCCATGCCTGGGGTTGGGGACAGGGCAGCAAACAAGATACCTGGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CAA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGTATCTCGCCAATCCTTaGTTGCATGGCCACACACTC +
Preference number: 5 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGYLANP*LHGHTL
Trigger: GAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATA...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGATATCTCGCCAATCCTTaGTTGCATGGCCACACACTC +
Preference number: 5 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRYLANP*LHGHTL
Trigger: GAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATA...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAGCGTGGCCAATTTaGTTGATGGATTTCTCCGGA +
Preference number: 5 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQRAWPI*LMDFSG
Trigger: TCCGGAGAAATCCATCAACAAAATTGGCCACGCTCT...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
ENST00000442837.5
CDS-3UTR CAA 90 bp ACAATCCACTATCAGGGGAAGGAATGGAAGGTGGCTCCTCCTCTCCGGGCCAGGTCAGAGAGGTTCTGCTaGCTCTTGTGTACCACTTCT +
Preference number: 5 (lower is better)
Translates to: TIHYQGKEWKVAPPLRARSERFC*LLCTTS
Trigger: AGAAGTGGTACACAAGAGCAAGCAGAACCTCTCTGA...CCTGGCCCGGAGAGGAGGAGCCACCTTCCATTCCTTCCCCTGATAGTGGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CAA 90 bp TTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAGAAGAGGAGAAACAACCTaGAGGTGCAGGGTCACTGTT +
Preference number: 5 (lower is better)
Translates to: LVAEKPPQGYVGAVGRQRRGETT*RCRVTV
Trigger: AACAGTGACCCTGCACCTCAAGGTTGTTTCTCCTCT...TCTCTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419872.1
CDS-3UTR CAA 90 bp GGGGCAGTAGGGAGGCAGAGAGGTGAAGATCTTAGGGAAGCCCCTGACCCAGCCAAGAAGAATCGAATCTaGTCACCACTGCTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: GAVGRQRGEDLREAPDPAKKNRI*SPLLKK
Trigger: TTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTT...GGCTGGGTCAGGGGCTTCCCTAAGATCTTCACCTCTCTGCCTCCCTACTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp GTGGGAGCCAGGGATGAACCAGAGACAGCCGTTCTCCAGCGTGGCATCCTCCACAAGAAGAATCGAATCTaGTCACCACTGCTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: VGARDEPETAVLQRGILHKKNRI*SPLLKK
Trigger: TTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTT...GTGGAGGATGCCACGCTGGAGAACGGCTGTCTCTGGTTCATCCCTGGCTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412476.5
ENST00000424503.1
CDS-3UTR CAA 90 bp GGAGACAATCCACTATCAGGGGAAGGAATGGAAGGTGGCTCCTCCTCTCCGGGCACCGCCAAAGTGAGGTaGCTTAAAGATGTACATGCT +
Preference number: 5 (lower is better)
Translates to: GDNPLSGEGMEGGSSSPGTAKVR*LKDVHA
Trigger: AGCATGTACATCTTTAAGCAACCTCACTTTGGCGGT...GCCCGGAGAGGAGGAGCCACCTTCCATTCCTTCCCCTGATAGTGGATTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CAA 90 bp CACCTTGAAGGAGTGTGTGATGCTCTTGAAGACGGGGTCGTGGGCGTGCAGAGCACCGCCAAAGTGAGGTaGCTTAAAGATGTACATGCT +
Preference number: 5 (lower is better)
Translates to: HLEGVCDALEDGVVGVQSTAKVR*LKDVHA
Trigger: AGCATGTACATCTTTAAGCAACCTCACTTTGGCGGT...GCTCTGCACGCCCACGACCCCGTCTTCAAGAGCATCACACACTCCTTCAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424503.1
CDS-3UTR CAA 90 bp TCCATTTCAGCCACTATCTCGCCAATCCTTTGTTGCATGGCCACACACTCTTCCGACCAGGTATCTTGTTaGCTGCCCTGTCCCCAACCC +
Preference number: 5 (lower is better)
Translates to: SISATISPILCCMATHSSDQVSC*LPCPQP
Trigger: GGGTTGGGGACAGGGCAGCAAACAAGATACCTGGTC...GGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATAGTGGCTGAAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CAA 90 bp ATCTCGCCAATCCTTTGTTGCATGGCCACACACTCTTCCGCAGACAAGAATCCTACCCTTCCCTCAACCTaGCAGCTGTGTGAAGGTGGG +
Preference number: 5 (lower is better)
Translates to: ISPILCCMATHSSADKNPTLPST*QLCEGG
Trigger: CCCACCTTCACACAGCTGCAAGGTTGAGGGAAGGGT...AGGATTCTTGTCTGCGGAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CAA 90 bp GCAGACAAGAATCCTTCCAGCACCAGGAATCCATCCTGTTGGAACTGCAGGCAGTATCTCGCCAATCCTTaGTTGCATGGCCACACACTC +
Preference number: 5 (lower is better)
Translates to: ADKNPSSTRNPSCWNCRQYLANP*LHGHTL
Trigger: GAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATA...CTGCCTGCAGTTCCAACAGGATGGATTCCTGGTGCTGGAAGGATTCTTGTCTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CAA 90 bp CCAGGAGGGGAGACAAGACCTCCCTGTTGCAACCAGGAGGCTGAGCAAGGCACTAAGAAGAATCGAATCTaGTCACCACTGCTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: PGGETRPPCCNQEAEQGTKKNRI*SPLLKK
Trigger: TTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTT...AGTGCCTTGCTCAGCCTCCTGGTTGCAACAGGGAGGTCTTGTCTCCCCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp GAATTCTGTGCGGCAGTGGAGAGGAACATCCATTTCAGCCACTATCTCGCCAATGCCAAGGTCTGCACCTaGAAGGAGTGTGTGATGCTC +
Preference number: 5 (lower is better)
Translates to: EFCAAVERNIHFSHYLANAKVCT*KECVML
Trigger: GAGCATCACACACTCCTTCAAGGTGCAGACCTTGGC...ATTGGCGAGATAGTGGCTGAAATGGATGTTCCTCTCCACTGCCGCACAGAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CAA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGACCGCCAAAGTGAGGTaGCTTAAAGATGTACATGCT +
Preference number: 5 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGTAKVR*LKDVHA
Trigger: AGCATGTACATCTTTAAGCAACCTCACTTTGGCGGT...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372592.8
ENST00000412476.5
CDS-3UTR CAA 90 bp CCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAGGCAGAAGAAGAATCGAATCTaGTCACCACTGCTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: PLVAEKPPQGYVGAVGRQKKNRI*SPLLKK
Trigger: TTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTT...CTGCCTCCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp CAGAACCCTTTGGTGGCTGAGAAGCCTCCTCAAGGCTATGTTGGGGCAGTAGGGAAGAAGAATCGAATCTaGTCACCACTGCTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: QNPLVAEKPPQGYVGAVGKKNRI*SPLLKK
Trigger: TTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTT...CCCTACTGCCCCAACATAGCCTTGAGGAGGCTTCTCAGCCACCAAAGGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000421063.6
CDS-3UTR CAA 90 bp CGTGTACAGGAAGGAGGCGTCCTGATGAGGGGAGACAATCCACTATCAGGGGAAAAGAAGAATCGAATCTaGTCACCACTGCTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: RVQEGGVLMRGDNPLSGEKKNRI*SPLLKK
Trigger: TTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTT...TTCCCCTGATAGTGGATTGTCTCCCCTCATCAGGACGCCTCCTTCCTGTACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS-3UTR CAA 90 bp CTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAAGAAATAGTCTGTGCGCCAAGGTCTGCACCTaGAAGGAGTGTGTGATGCTC +
Preference number: 5 (lower is better)
Translates to: LSQRRIESCHHCSRNSLCAKVCT*KECVML
Trigger: GAGCATCACACACTCCTTCAAGGTGCAGACCTTGGC...GCACAGACTATTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CAA 90 bp AATTTTGTTGATGGATTTCTCCGGAGGGACCAGGAAATTTCCTTTCTCATCAAAGTGGGACCAGGTATCTaGTTTGCTGCCCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: NFVDGFLRRDQEISFLIKVGPGI*FAALSP
Trigger: TGGGGACAGGGCAGCAAACAAGATACCTGGTCCCAC...TTTGATGAGAAAGGAAATTTCCTGGTCCCTCCGGAGAAATCCATCAACAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CAA 90 bp TCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAGCGTGGCCAATTTTGTaGATGGATTTCTCCGGAGGG +
Preference number: 5 (lower is better)
Translates to: SHQKRLSQRRIESCHHCSAWPIL*MDFSGG
Trigger: CCCTCCGGAGAAATCCATCAACAAAATTGGCCACGC...TGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CAA 90 bp ATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAAGAACAGGAATCCATCCTGTaGGAACTGCAGGCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: IKNAFLKEESNLVTTAQEQESIL*ELQAGL
Trigger: CAAGCCTGCCTGCAGTTCCAACAGGATGGATTCCTG...TTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS-3UTR CAA 90 bp TTTCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCTCGCCAATCCTTTGTaGCATGGCCACACACTCTTC +
Preference number: 5 (lower is better)
Translates to: FLIKNAFLKEESNLVTTALANPL*HGHTLF
Trigger: GAAGAGTGTGTGGCCATGCAACAAAGGATTGGCGAG...AGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CAA 90 bp ATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAAGAATATCTCGCCAATCCTTaGTTGCATGGCCACACACTC +
Preference number: 5 (lower is better)
Translates to: IKNAFLKEESNLVTTAQEYLANP*LHGHTL
Trigger: GAGTGTGTGGCCATGCAACAAAGGATTGGCGAGATA...TTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS-3UTR CAA 90 bp TCTCATCAAAAACGCCTTTCTCAAAGAAGAATCGAATCTTGTCACCACTGCTCAAAGAAGAATCGAATCTaGTCACCACTGCTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: SHQKRLSQRRIESCHHCSKKNRI*SPLLKK
Trigger: TTTCTTGAGCAGTGGTGACAAGATTCGATTCTTCTT...TGAGCAGTGGTGACAAGATTCGATTCTTCTTTGAGAAAGGCGTTTTTGATGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424503.1
ENST00000451000.5
CDS CCA 72 bp AGGGGCTCAGGCAGGCCATGGAGACGCTCAGGGCACTaGGCGGCTTCTAAGCGCGGCCTCCAGGTGCCGGGA +
Preference number: 6 (lower is better)
Translates to: RGSGRPWRRSGH*AASKRGLQVPG
Trigger: TCCCGGCACCTGGAGGCCGCGCTTAGAAGCCGCCCAGTGCCCTGAGCGTCTCCATGGCCTGCCTGAGCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419552.5
ENST00000426694.5
ENST00000428610.5
CDS GCA 72 bp CAGGCGCCGCCATTCCCTGTGACTCTGAGGAACGCCTaGCTCTCTCTAGGCCTCAATCTGCAGGCCGGGTGC +
Preference number: 6 (lower is better)
Translates to: QAPPFPVTLRNA*LSLGLNLQAGC
Trigger: GCACCCGGCCTGCAGATTGAGGCCTAGAGAGAGGCAGGCGTTCCTCAGAGTCACAGGGAATGGCGGCGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419552.5
ENST00000428610.5
CDS CCA 72 bp GGGAAATTATGCTGTGAGAGGGTCAGGCCAAGCAGCTaGGCTGAGTCCCAGTCCAGGCGCCGCCATTCCCTG +
Preference number: 6 (lower is better)
Translates to: GKLCCERVRPSS*AESQSRRRHSL
Trigger: CAGGGAATGGCGGCGCCTGGACTGGGACTCAGCCCAGCTGCTTGGCCTGACCCTCTCACAGCATAATTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
ENST00000419552.5
ENST00000426694.5
ENST00000428610.5
CDS CAA 72 bp CAGGCGCTGAGCCAACAGGGGCCCGGACCATCCTTCTaGACACACCACCTGCAGGCCAAGATGGAGAGCCTT +
Preference number: 6 (lower is better)
Translates to: QALSQQGPGPSF*THHLQAKMESL
Trigger: AAGGCTCTCCATCTTGGCCTGCAGGTGGTGTGTCAAGAAGGATGGTCCGGGCCCCTGTTGGCTCAGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487504.1
CDS GCA 72 bp CAGGCGCCGCCATTCCCTGTGACTCTGAGGAACGCCTaGCTCTCTCTAGGCCTCAATCCTCAGGCCCAAGAT +
Preference number: 6 (lower is better)
Translates to: QAPPFPVTLRNA*LSLGLNPQAQD
Trigger: ATCTTGGGCCTGAGGATTGAGGCCTAGAGAGAGGCAGGCGTTCCTCAGAGTCACAGGGAATGGCGGCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS CAA 90 bp CCCTTCCCTCAACCTTGCAGCTGTGTGAAGGTGGGACCAGGTATCTaGTTTGCTGCCCTGTCCCCAACCCCAGGCATGGAGTCTGGCACC +
Preference number: 6 (lower is better)
Translates to: PFPQPCSCVKVGPGI*FAALSPTPGMESGT
Trigger: GGTGCCAGACTCCATGCCTGGGGTTGGGGACAGGGCAGCAAACAAGATACCTGGTCCCACCTTCACACAGCTGCAAGGTTGAGGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS CAA 90 bp AGCTGGTACCAGGCGCTGAGCCAACAGGGGCCCGGACCATCCTTCTaGACACACCACCTGCAGGCCAAGATGGAGAGCCTTAAACTCCTC +
Preference number: 6 (lower is better)
Translates to: SWYQALSQQGPGPSF*THHLQAKMESLKLL
Trigger: GAGGAGTTTAAGGCTCTCCATCTTGGCCTGCAGGTGGTGTGTCAAGAAGGATGGTCCGGGCCCCTGTTGGCTCAGCGCCTGGTACCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487504.1
CDS TCA 72 bp TGGGGAGAACTATCTGGGCCCCTCCCAGCACCGATCTaGAACCCTCTCGGTCCTGGGAGGATTATGGAAGGG +
Preference number: 6 (lower is better)
Translates to: WGELSGPLPAPI*NPLGPGRIMEG
Trigger: CCCTTCCATAATCCTCCCAGGACCGAGAGGGTTTCAGATCGGTGCTGGGAGGGGCCCAGATAGTTCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426694.5
CDS CCA 72 bp CCAAGATACTTGGCATCTCAAGTCGGGCTGGCACAGTaGAGCTGGGGTCAGAACAACACCTGCAGGCCGGGT +
Preference number: 6 (lower is better)
Translates to: PRYLASQVGLAQ*SWGQNNTCRPG
Trigger: ACCCGGCCTGCAGGTGTTGTTCTGACCCCAGCTCCACTGTGCCAGCCCGACTTGAGATGCCAAGTATCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308941.9
ENST00000372592.8
ENST00000412476.5
CDS CAA 90 bp GAACGCCTGCCTCTCTCTAGGCCTCAATCCTCAGGCCCAAGATACTaGGCATCTCAAGTCGGGCTGGCACAGTGGAGCTGGGGTCAGAAC +
Preference number: 6 (lower is better)
Translates to: ERLPLSRPQSSGPRY*ASQVGLAQWSWGQN
Trigger: GTTCTGACCCCAGCTCCACTGTGCCAGCCCGACTTGAGATGCCAAGTATCTTGGGCCTGAGGATTGAGGCCTAGAGAGAGGCAGGCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS GCA 72 bp CAGGCGCCGCCATTCCCTGTGACTCTGAGGAACGCCTaGCTCTCTCTAGGCCTCAATCTGGATAGAATGGGA +
Preference number: 6 (lower is better)
Translates to: QAPPFPVTLRNA*LSLGLNLDRMG
Trigger: TCCCATTCTATCCAGATTGAGGCCTAGAGAGAGGCAGGCGTTCCTCAGAGTCACAGGGAATGGCGGCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426694.5
CDS CCA 72 bp CTCTCTCTAGGCCTCAATCCTCAGGCCCAAGATACTTaGCATCTCAAGTCGGGCTGGCACAGTGGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: LSLGLNPQAQDT*HLKSGWHSGAG
Trigger: CCCAGCTCCACTGTGCCAGCCCGACTTGAGATGCCAAGTATCTTGGGCCTGAGGATTGAGGCCTAGAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS CCA 72 bp ATTCCAAAGGTGGAAGAGGTCCTGGGGAGAACTATCTaGGCCCCTCCCAGCACCGATCTGAAACCCTCTCGG +
Preference number: 6 (lower is better)
Translates to: IPKVEEVLGRTI*APPSTDLKPSR
Trigger: CCGAGAGGGTTTCAGATCGGTGCTGGGAGGGGCCCAGATAGTTCTCCCCAGGACCTCTTCCACCTTTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426694.5
CDS CAA 72 bp CCTCTCTCTAGGCCTCAATCCTCAGGCCCAAGATACTaGGCATCTCAAGTCGGGCTGGCACAGTGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: PLSRPQSSGPRY*ASQVGLAQWSW
Trigger: CCAGCTCCACTGTGCCAGCCCGACTTGAGATGCCAAGTATCTTGGGCCTGAGGATTGAGGCCTAGAGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308941.9
ENST00000353176.9
ENST00000372592.8
ENST00000412476.5
CDS CAA 90 bp GCTTCCCCAGTCTGCAAATGCTCCTGTCTGACCCTTCCCTCAACCTaGCAGCTGTGTGAAGGTGGGACCAGGTATCTTGTTTGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: ASPVCKCSCLTLPST*QLCEGGTRYLVCCP
Trigger: AGGGCAGCAAACAAGATACCTGGTCCCACCTTCACACAGCTGCAAGGTTGAGGGAAGGGTCAGACAGGAGCATTTGCAGACTGGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS TCA 72 bp GGGCCCACAGCTCTCAGCTCACCTTCACCGCCAAAGTaGGGTTGCTTAAAGATGTACATGCTCTGCACCACC +
Preference number: 6 (lower is better)
Translates to: GPTALSSPSPPK*GCLKMYMLCTT
Trigger: GGTGGTGCAGAGCATGTACATCTTTAAGCAACCTCACTTTGGCGGTGAAGGTGAGCTGAGAGCTGTGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5
CDS TCA 72 bp CTCCTGTCTGACCCTTCCCTCAACCTTGCAGCTGTGTaGAGGTGGGACCAGGTATCTTGTTTGCTGCCCTGT +
Preference number: 6 (lower is better)
Translates to: LLSDPSLNLAAV*RWDQVSCLLPC
Trigger: ACAGGGCAGCAAACAAGATACCTGGTCCCACCTTCACACAGCTGCAAGGTTGAGGGAAGGGTCAGACAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451000.5
CDS GCA 72 bp GTCCTGATGAGGGGAGACTTAAAGATGTACATGCTCTaGACCACCACGGGCATCTGGAGGCCCAGACTTCTG +
Preference number: 6 (lower is better)
Translates to: VLMRGDLKMYML*TTTGIWRPRLL
Trigger: CAGAAGTCTGGGCCTCCAGATGCCCGTGGTGGTGCAGAGCATGTACATCTTTAAGTCTCCCCTCATCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308941.9
ENST00000442837.5
CDS CCA 72 bp GCCCCTCCCAGCACCGATCTGAAACCCTCTCGGTCCTaGGAGGATTATGGAAGGGAATTAACGCATCCATCT +
Preference number: 6 (lower is better)
Translates to: APPSTDLKPSRS*EDYGRELTHPS
Trigger: AGATGGATGCGTTAATTCCCTTCCATAATCCTCCCAGGACCGAGAGGGTTTCAGATCGGTGCTGGGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426694.5
CDS CAA 72 bp CACAGCTCTCAGCTCACCTTCACCGCCAAAGTGAGGTaGCTTAAAGATGTACATGCTCTGCACCACCACGGG +
Preference number: 6 (lower is better)
Translates to: HSSQLTFTAKVR*LKDVHALHHHG
Trigger: CCCGTGGTGGTGCAGAGCATGTACATCTTTAAGCAACCTCACTTTGGCGGTGAAGGTGAGCTGAGAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412476.5