RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHLDA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000139289

Ensembl transcript IDs: ENST00000266671.10, ENST00000602540.5, ENST00000619060.1

Found 427 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCCCCACTGCTCAGCCTGCCATCAGCCATCCAGCTGCAGAGCAGTaGAGAGTAGGTCTCACCAGTTTTTGTGCAGATGCTTCTAACCCA +
Preference number: 1 (lower is better)
Translates to: FPTAQPAISHPAAEQ*RVGLTSFCADASNP
Trigger: TGGGTTAGAAGCATCTGCACAAAAACTGGTGAGACCTACTCTCCACTGCTCTGCAGCTGGATGGCTGATGGCAGGCTGAGCAGTGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR GCA 90 bp TTCTCAATATACAGTGACCTGGAAGGACTCCCTGTTGTTAAAACCTaGTTCCCCACTGCTCAGCCTGCCATCAGCCATCCAGCTGCAGAG +
Preference number: 1 (lower is better)
Translates to: FSIYSDLEGLPVVKT*FPTAQPAISHPAAE
Trigger: CTCTGCAGCTGGATGGCTGATGGCAGGCTGAGCAGTGGGGAAGCAGGTTTTAACAACAGGGAGTCCTTCCAGGTCACTGTATATTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR CCA 90 bp CCTTCCTTTGTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTaGTGCCAACACAAGTTCAAGGACAAAAGTTCAGTTTCCAGATGG +
Preference number: 1 (lower is better)
Translates to: PSFVPTVIELTVYEA*CQHKFKDKSSVSRW
Trigger: CCATCTGGAAACTGAACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGACAAAGGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR GCA 90 bp CTAAAACAAAGTAAAGGGATCAGAAAATGTGGTTCAAGTCAAGTGTaGAAAGCTCTCGAAGAAAGGTCCTGCAGCCTGGACAGGAGTACA +
Preference number: 1 (lower is better)
Translates to: LKQSKGIRKCGSSQV*KALEERSCSLDRST
Trigger: TGTACTCCTGTCCAGGCTGCAGGACCTTTCTTCGAGAGCTTTGCACACTTGACTTGAACCACATTTTCTGATCCCTTTACTTTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR TCA 90 bp AAATCTGGATTATCTGCCCAACCGTGCAAGTCAATAAGCCACCCTTaGAAACTGTGTCAAGATTTGAGGAAACAGGTCTTAAGAACCTAT +
Preference number: 1 (lower is better)
Translates to: KSGLSAQPCKSISHP*KLCQDLRKQVLRTY
Trigger: ATAGGTTCTTAAGACCTGTTTCCTCAAATCTTGACACAGTTTTCAAGGGTGGCTTATTGACTTGCACGGTTGGGCAGATAATCCAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR GCA 90 bp AAATGTGGTTCAAGTCAAGTGTGCAAAGCTCTCGAAGAAAGGTCCTaGAGCCTGGACAGGAGTACAAATATTCTCTTATACAAGTTAAAT +
Preference number: 1 (lower is better)
Translates to: KCGSSQVCKALEERS*SLDRSTNILLYKLN
Trigger: ATTTAACTTGTATAAGAGAATATTTGTACTCCTGTCCAGGCTGCAGGACCTTTCTTCGAGAGCTTTGCACACTTGACTTGAACCACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR TCA 90 bp GTGTCAAGATTTGAGGAAACAGGTCTTAAGAACCTATCCAACACATaGTTCCATAACCAATACATCTTAGGTTGTTTTAGGCAAATAGGT +
Preference number: 1 (lower is better)
Translates to: VSRFEETGLKNLSNT*FHNQYILGCFRQIG
Trigger: ACCTATTTGCCTAAAACAACCTAAGATGTATTGGTTATGGAATCATGTGTTGGATAGGTTCTTAAGACCTGTTTCCTCAAATCTTGACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTGCTGAGACAGGAGAATaGCGTGAACCCAGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LSEARDSISQMLGSYTFCAETGE*REPRRQ
Trigger: CTGCCTCCTGGGTTCACGCCATTCTCCTGTCTCAGC...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACGTGTATGAGGCTTGGTaGCAACACAAGTTCAAGGAC +
Preference number: 2 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHVYEAW*QHKFKD
Trigger: GTCCTTGAACTTGTGTTGGCACCAAGCCTCATACAC...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACCATGCAAATAGGAAGTaGTTTTCAGCCCCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHHANRK*FSAPRG
Trigger: TCCTCTTGGGGCTGAAAATCACTTCCTATTTGCATG...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTCCAAACTACTTGATCTaGTGCGGGGCGGAGAGACTG +
Preference number: 2 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSPNYLI*CGAERL
Trigger: CAGTCTCTCCGCCCCGCACCAGATCAAGTAGTTTGG...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACAAAGGTCCTGCAGCCTaGACAGGAGTACAAATATTC +
Preference number: 2 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHKGPAA*TGVQIF
Trigger: GAATATTTGTACTCCTGTCCAGGCTGCAGGACCTTT...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR CAA 90 bp TCCAAACTACTTGATCTGGTGCGGGGCGGAGAGACTGTTTTGCTTTaGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTC +
Preference number: 2 (lower is better)
Translates to: SKLLDLVRGGETVLL*IQVKTIEMCSSHFL
Trigger: GAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGCAAAACAGTCTCTCCGCCCCGCACCAGATCAAGTAGTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTGACAGGAGAATGGCGTaGACCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKADRRMA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCACGCCATTCTCCTGTC...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTGTGTATGAGGCTTGGTaGCAACACAAGTTCAAGGAC +
Preference number: 2 (lower is better)
Translates to: LSEARDSISQMLGSYTFCVYEAW*QHKFKD
Trigger: GTCCTTGAACTTGTGTTGGCACCAAGCCTCATACAC...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACACAGCATCTCCCAGATaGTGGGAAGTTACACATTTT +
Preference number: 2 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHTASPR*WEVTHF
Trigger: AAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGT...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAAAGACTCCTCAACAAGTaGCTTCTAAGACAAGACTGG +
Preference number: 2 (lower is better)
Translates to: MIPVALLRTMATTGEEKERLLNK*LLRQDW
Trigger: CCAGTCTTGTCTTAGAAGCCACTTGTTGAGGAGTCT...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTGCTGAGACAGGAGAATaGCGTGAACCCAGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAAETGE*REPRRQ
Trigger: CTGCCTCCTGGGTTCACGCCATTCTCCTGTCTCAGC...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAAAAGACAATAGAAATGTaGTCGTCCCACTTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: MIPVALLRTMATTGEEKEKTIEM*SSHFLK
Trigger: CTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTT...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTAACTACTTGATCTGGTaGGGGGCGGAGAGACTGTTT +
Preference number: 2 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSNYLIW*GAERLF
Trigger: AAACAGTCTCTCCGCCCCGCACCAGATCAAGTAGTT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTGGTTCAAGTCAAGTGTaGAAAGCTCTCGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: LSEARDSISQMLGSYTFCGSSQV*KALEER
Trigger: CCTTTCTTCGAGAGCTTTGCACACTTGACTTGAACC...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTCCAAACTACTTGATCTaGTGCGGGGCGGAGAGACTG +
Preference number: 2 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAPNYLI*CGAERL
Trigger: CAGTCTCTCCGCCCCGCACCAGATCAAGTAGTTTGG...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAAGGTCCTGCAGCCTaGACAGGAGTACAAATATTC +
Preference number: 2 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFKGPAA*TGVQIF
Trigger: GAATATTTGTACTCCTGTCCAGGCTGCAGGACCTTT...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACAGGGATCAGAAAATGTaGTTCAAGTCAAGTGTGCAA +
Preference number: 2 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHRDQKM*FKSSVQ
Trigger: TTGCACACTTGACTTGAACCACATTTTCTGATCCCT...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTCCAAACTACTTGATCTaGTGCGGGGCGGAGAGACTG +
Preference number: 2 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAPNYLI*CGAERL
Trigger: CAGTCTCTCCGCCCCGCACCAGATCAAGTAGTTTGG...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAGACAGGAGAATGGCGTaGACCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKDRRMA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCACGCCATTCTCCTGTC...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTAACTACTTGATCTGGTaGGGGGCGGAGAGACTGTTT +
Preference number: 2 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFNYLIW*GAERLF
Trigger: AAACAGTCTCTCCGCCCCGCACCAGATCAAGTAGTT...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTAGACTCCTCAACAAGTaGCTTCTAAGACAAGACTGG +
Preference number: 2 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSRLLNK*LLRQDW
Trigger: CCAGTCTTGTCTTAGAAGCCACTTGTTGAGGAGTCT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAAGAACTCCTTTCTAGATaGAAGGAGAATAAAGACATC +
Preference number: 2 (lower is better)
Translates to: MIPVALLRTMATTGEEKEELLSR*KENKDI
Trigger: GATGTCTTTATTCTCCTTCCATCTAGAAAGGAGTTC...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAGATGTCCAAACTACTTaGTCTGGTGCGGGGCGGAGA +
Preference number: 2 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKDVQTT*SGAGRR
Trigger: TCTCCGCCCCGCACCAGATCAAGTAGTTTGGACATC...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTGGGTTGTTTTCTTACTaGAAATCCTGTGTTTATCCA +
Preference number: 2 (lower is better)
Translates to: LSEARDSISQMLGSYTFCGLFSY*KSCVYP
Trigger: TGGATAAACACAGGATTTTCAGTAAGAAAACAACCC...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTATGCTGGAAAAATACTaGCCAAGACTTTCTGTGAAA +
Preference number: 2 (lower is better)
Translates to: LSEARDSISQMLGSYTFCMLEKY*PRLSVK
Trigger: TTTCACAGAAAGTCTTGGTCAGTATTTTTCCAGCAT...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTTTAATTTCAACCAGCTaGCACAACAATGAAAGTGTC +
Preference number: 2 (lower is better)
Translates to: LSEARDSISQMLGSYTFCLISTS*HNNESV
Trigger: GACACTTTCATTGTTGTGCCAGCTGGTTGAAATTAA...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCTTAATTTCAACCAGCTaGCACAACAATGAAAGTGTC +
Preference number: 2 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFLISTS*HNNESV
Trigger: GACACTTTCATTGTTGTGCCAGCTGGTTGAAATTAA...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAACCAGCTGCAGAGCAGTaGAGAGTAGGTCTCACCAGT +
Preference number: 2 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKPAAEQ*RVGLTS
Trigger: ACTGGTGAGACCTACTCTCCACTGCTCTGCAGCTGG...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTAAAAGGAACACTCAGTaGGGCAAGAGACAGCATCTC +
Preference number: 2 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAKRNTQ*GKRQHL
Trigger: GAGATGCTGTCTCTTGCCTCACTGAGTGTTCCTTTT...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTGGTTCAAGTCAAGTGTaGAAAGCTCTCGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFGSSQV*KALEER
Trigger: CCTTTCTTCGAGAGCTTTGCACACTTGACTTGAACC...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTCCCCTTATAGACATTTaGTCTTTGACGTCAGCACTC +
Preference number: 2 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAPLIDI*SLTSAL
Trigger: GAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGG...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTAGGGATCAGAAAATGTaGTTCAAGTCAAGTGTGCAA +
Preference number: 2 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSRDQKM*FKSSVQ
Trigger: TTGCACACTTGACTTGAACCACATTTTCTGATCCCT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTACTGTGTATGAGGCTTaGTGCCAACACAAGTTCAAG +
Preference number: 2 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKATVYEA*CQHKFK
Trigger: CTTGAACTTGTGTTGGCACCAAGCCTCATACACAGT...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTCCTCCACAACATTTTTaGAATGAAACAGCAAATGCA +
Preference number: 2 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSPPQHF*NETANA
Trigger: TGCATTTGCTGTTTCATTTCAAAAATGTTGTGGAGG...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTAACAAGGGATGTGTTTaGACTCATACACTTGCAGCA +
Preference number: 2 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKANKGCV*THTLAA
Trigger: TGCTGCAAGTGTATGAGTTCAAACACATCCCTTGTT...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTAAGACAATAGAAATGTaGTCGTCCCACTTCCTCAAG +
Preference number: 2 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFKTIEM*SSHFLK
Trigger: CTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTT...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAAACTACTTGATCTGGTaGGGGGCGGAGAGACTGTTT +
Preference number: 2 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAINYLIW*GAERLF
Trigger: AAACAGTCTCTCCGCCCCGCACCAGATCAAGTAGTT...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTGGTTCAAGTCAAGTGTaGAAAGCTCTCGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAGSSQV*KALEER
Trigger: CCTTTCTTCGAGAGCTTTGCACACTTGACTTGAACC...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAACTTCTCAATATACAGTaGCCTGGAAGGACTCCCTGT +
Preference number: 2 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKLLNIQ*PGRTPC
Trigger: ACAGGGAGTCCTTCCAGGTCACTGTATATTGAGAAG...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTCTCGAAATCGTTTCCTaGATCGTGATGAAAAGTATG +
Preference number: 2 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFLEIVS*IVMKSM
Trigger: CATACTTTTCATCACGATGCAGGAAACGATTTCGAG...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTCTCGAAATCGTTTCCTaGATCGTGATGAAAAGTATG +
Preference number: 2 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKALEIVS*IVMKSM
Trigger: CATACTTTTCATCACGATGCAGGAAACGATTTCGAG...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTACTTTGTATCATCTATaGCTCCATTTAAACCCAAGT +
Preference number: 2 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSTLYHL*LHLNPS
Trigger: ACTTGGGTTTAAATGGAGCCATAGATGATACAAAGT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTAAGTTTTCAGTAGGGTaGTGTCCAAACTACTTGATC +
Preference number: 2 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAKFSVG*CPNYLI
Trigger: GATCAAGTAGTTTGGACATCACCCTACTGAAAACTT...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATACATGCAAATAGGAAGTaGTTTTCAGCCCCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIHANRK*FSAPRG
Trigger: TCCTCTTGGGGCTGAAAATCACTTCCTATTTGCATG...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTCTCGAAATCGTTTCCTaGATCGTGATGAAAAGTATG +
Preference number: 2 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCALEIVS*IVMKSM
Trigger: CATACTTTTCATCACGATGCAGGAAACGATTTCGAG...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTTTGAACTCATACACTTaGAGCAAACTTTACTGTCAG +
Preference number: 2 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKALNSYT*SKLYCQ
Trigger: CTGACAGTAAAGTTTGCTGCAAGTGTATGAGTTCAA...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAAGACTCCTCAACAAGTaGCTTCTAAGACAAGACTGG +
Preference number: 2 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKRLLNK*LLRQDW
Trigger: CCAGTCTTGTCTTAGAAGCCACTTGTTGAGGAGTCT...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAACTGTGTATGAGGCTTaGTGCCAACACAAGTTCAAG +
Preference number: 2 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKTVYEA*CQHKFK
Trigger: CTTGAACTTGTGTTGGCACCAAGCCTCATACACAGT...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR GCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTTTGAACTCATACACTTaGAGCAAACTTTACTGTCAG +
Preference number: 2 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCALNSYT*SKLYCQ
Trigger: CTGACAGTAAAGTTTGCTGCAAGTGTATGAGTTCAA...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTACTTTGTATCATCTATaGCTCCATTTAAACCCAAGT +
Preference number: 2 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKATLYHL*LHLNPS
Trigger: ACTTGGGTTTAAATGGAGCCATAGATGATACAAAGT...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAAAGTTTTCAGTAGGGTaGTGTCCAAACTACTTGATC +
Preference number: 2 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKKFSVG*CPNYLI
Trigger: GATCAAGTAGTTTGGACATCACCCTACTGAAAACTT...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAATCAATAAGCCACCCTTaGAAACTGTGTCAAGATTTG +
Preference number: 2 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKSISHP*KLCQDL
Trigger: CAAATCTTGACACAGTTTTCAAGGGTGGCTTATTGA...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAAGGGATCAGAAAATGTaGTTCAAGTCAAGTGTGCAA +
Preference number: 2 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIRDQKM*FKSSVQ
Trigger: TTGCACACTTGACTTGAACCACATTTTCTGATCCCT...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR TCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAATGCTGGAAAAATACTaGCCAAGACTTTCTGTGAAA +
Preference number: 2 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKMLEKY*PRLSVK
Trigger: TTTCACAGAAAGTCTTGGTCAGTATTTTTCCAGCAT...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAGAACTCCTTTCTAGATaGAAGGAGAATAAAGACATC +
Preference number: 2 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKELLSR*KENKDI
Trigger: GATGTCTTTATTCTCCTTCCATCTAGAAAGGAGTTC...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAACACCCAGATCTAAATaGATTTCCACTAAGAAAGTC +
Preference number: 2 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKTPRSK*ISTKKV
Trigger: GACTTTCTTAGTGGAAATCCATTTAGATCTGGGTGT...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAACTTTGTATCATCTATaGCTCCATTTAAACCCAAGT +
Preference number: 2 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKTLYHL*LHLNPS
Trigger: ACTTGGGTTTAAATGGAGCCATAGATGATACAAAGT...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR CCA 72 bp GCTCAGCCTGCCATCAGCCATCCAGCTGCAGAGCAGTaGAGAGTAGGTCTCACCAGTTTTTGTGCAGATGCT +
Preference number: 3 (lower is better)
Translates to: AQPAISHPAAEQ*RVGLTSFCADA
Trigger: AGCATCTGCACAAAAACTGGTGAGACCTACTCTCCACTGCTCTGCAGCTGGATGGCTGATGGCAGGCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACGGAGCGGGTCTTCTATaGGATCTGCCCTTTCGGTTG +
Preference number: 3 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHGAGLL*DLPFRL
Trigger: CAACCGAAAGGGCAGATCCAATAGAAGACCCGCTCC...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCCAAGTCCTCAAAACCTaGTCTTGCCCGGGAGCTGCC +
Preference number: 3 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFQVLKT*SCPGAA
Trigger: GGCAGCTCCCGGGCAAGACAAGGTTTTGAGGACTTG...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACAGCCCCAAGAGGACTTaGTATCATCTATGGCTCCAT +
Preference number: 3 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHSPKRT*YHLWLH
Trigger: ATGGAGCCATAGATGATACAAAGTCCTCTTGGGGCT...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACCTGTCCCAGAATTCATaGTTCTCAGGGAATGACATG +
Preference number: 3 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHLSQNS*FSGNDM
Trigger: CATGTCATTCCCTGAGAACAATGAATTCTGGGACAG...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTGGAGCGGGTCTTCTATaGGATCTGCCCTTTCGGTTG +
Preference number: 3 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAGAGLL*DLPFRL
Trigger: CAACCGAAAGGGCAGATCCAATAGAAGACCCGCTCC...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTTTGTCCCAACAGTTATaGAGCTCACTGTGTATGAGG +
Preference number: 3 (lower is better)
Translates to: LSEARDSISQMLGSYTFCLSQQL*SSLCMR
Trigger: CCTCATACACAGTGAGCTCAATAACTGTTGGGACAA...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR GCA 72 bp AGTAAAGGGATCAGAAAATGTGGTTCAAGTCAAGTGTaGAAAGCTCTCGAAGAAAGGTCCTGCAGCCTGGAC +
Preference number: 3 (lower is better)
Translates to: SKGIRKCGSSQV*KALEERSCSLD
Trigger: GTCCAGGCTGCAGGACCTTTCTTCGAGAGCTTTGCACACTTGACTTGAACCACATTTTCTGATCCCTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTAGCCCCAAGAGGACTTaGTATCATCTATGGCTCCAT +
Preference number: 3 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSSPKRT*YHLWLH
Trigger: ATGGAGCCATAGATGATACAAAGTCCTCTTGGGGCT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAACAAGTCCTCAAAACCTaGTCTTGCCCGGGAGCTGCC +
Preference number: 3 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKQVLKT*SCPGAA
Trigger: GGCAGCTCCCGGGCAAGACAAGGTTTTGAGGACTTG...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATACAAGTCCTCAAAACCTaGTCTTGCCCGGGAGCTGCC +
Preference number: 3 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIQVLKT*SCPGAA
Trigger: GGCAGCTCCCGGGCAAGACAAGGTTTTGAGGACTTG...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAATTTCCCTGCAACTTTTaGGATATGAGTTATGATCTC +
Preference number: 3 (lower is better)
Translates to: MIPVALLRTMATTGEEKEFPCNF*DMSYDL
Trigger: GAGATCATAACTCATATCCAAAAAGTTGCAGGGAAA...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR GCA 72 bp TCAAGTCAAGTGTGCAAAGCTCTCGAAGAAAGGTCCTaGAGCCTGGACAGGAGTACAAATATTCTCTTATAC +
Preference number: 3 (lower is better)
Translates to: SSQVCKALEERS*SLDRSTNILLY
Trigger: GTATAAGAGAATATTTGTACTCCTGTCCAGGCTGCAGGACCTTTCTTCGAGAGCTTTGCACACTTGACTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR CCA 72 bp GTGATTTTCAGCCCCAAGAGGACTTTGTATCATCTATaGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGT +
Preference number: 3 (lower is better)
Translates to: VIFSPKRTLYHL*LHLNPSSICPG
Trigger: ACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAAAGTCCTCTTGGGGCTGAAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR CCA 72 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTaGTGCCAACACAAGTTCAAGGACAAAAGTTCAGTT +
Preference number: 3 (lower is better)
Translates to: VPTVIELTVYEA*CQHKFKDKSSV
Trigger: AACTGAACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTGAGACTGTTTTGCTTTaGATCCAAGTGAAGACAATA +
Preference number: 3 (lower is better)
Translates to: LSEARDSISQMLGSYTFCETVLL*IQVKTI
Trigger: TATTGTCTTCACTTGGATCAAAAGCAAAACAGTCTC...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCGAGACTGTTTTGCTTTaGATCCAAGTGAAGACAATA +
Preference number: 3 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFETVLL*IQVKTI
Trigger: TATTGTCTTCACTTGGATCAAAAGCAAAACAGTCTC...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAAAGTAATTTGACCTaGGAACTCCTTTCTAGATGG +
Preference number: 3 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFKSNLT*ELLSRW
Trigger: CCATCTAGAAAGGAGTTCCAAGGTCAAATTACTTTT...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR TCA 72 bp TTATCTGCCCAACCGTGCAAGTCAATAAGCCACCCTTaGAAACTGTGTCAAGATTTGAGGAAACAGGTCTTA +
Preference number: 3 (lower is better)
Translates to: LSAQPCKSISHP*KLCQDLRKQVL
Trigger: TAAGACCTGTTTCCTCAAATCTTGACACAGTTTTCAAGGGTGGCTTATTGACTTGCACGGTTGGGCAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTAAAAGTAATTTGACCTaGGAACTCCTTTCTAGATGG +
Preference number: 3 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSKSNLT*ELLSRW
Trigger: CCATCTAGAAAGGAGTTCCAAGGTCAAATTACTTTT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTTTCCATGAAGCTGATTaGTCAGGCTTCAAAATATCT +
Preference number: 3 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSFHEAD*SGFKIS
Trigger: AGATATTTTGAAGCCTGACAAATCAGCTTCATGGAA...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTTTGTCCTTCCTTCCTTaGTCCCAACAGTTATTGAGC +
Preference number: 3 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCALSFLP*SQQLLS
Trigger: GCTCAATAACTGTTGGGACAAAGGAAGGAAGGACAA...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTGGGAAGTTACACATTTaGTCCTTCCTTCCTTTGTCC +
Preference number: 3 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAGKLHI*SFLPLS
Trigger: GGACAAAGGAAGGAAGGACAAAATGTGTAACTTCCC...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAATGGAAGGACTCCCTGTaGTTAAAACCTGCTTCCCCA +
Preference number: 3 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKWKDSL*LKPASP
Trigger: TGGGGAAGCAGGTTTTAACAACAGGGAGTCCTTCCA...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAGCCCCTTATAGACATTaGCTCTTTGACGTCAGCACT +
Preference number: 3 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKAPYRH*LFDVST
Trigger: AGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGC...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTAAAAGTAATTTGACCTaGGAACTCCTTTCTAGATGG +
Preference number: 3 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAKSNLT*ELLSRW
Trigger: CCATCTAGAAAGGAGTTCCAAGGTCAAATTACTTTT...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTTTCCATGAAGCTGATTaGTCAGGCTTCAAAATATCT +
Preference number: 3 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAFHEAD*SGFKIS
Trigger: AGATATTTTGAAGCCTGACAAATCAGCTTCATGGAA...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATACTGTCCCAGAATTCATaGTTCTCAGGGAATGACATG +
Preference number: 3 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAILSQNS*FSGNDM
Trigger: CATGTCATTCCCTGAGAACAATGAATTCTGGGACAG...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAATAGACATTTGCTCTTaGACGTCAGCACTCCCCATA +
Preference number: 3 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKIDICS*TSALPI
Trigger: TATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTAT...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTTTAGAGAATCCCAGCTaGCTCAATGAGGAAAATGTT +
Preference number: 3 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCALENPS*LNEENV
Trigger: AACATTTTCCTCATTGAGCAAGCTGGGATTCTCTAA...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR GCA 72 bp AACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTaGTATAAAATTGCTCCAGGTTCAAGTCTTAGACCA +
Preference number: 3 (lower is better)
Translates to: NKCSQSYLRRIL*YKIAPGSSLRP
Trigger: TGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAACTTCTGCTTACTTCATaGGACAATATTGCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKLLLTS*DNIALS
Trigger: AGAAAGGGCAATATTGTCCAATGAAGTAAGCAGAAG...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAATTTGAACTCATACACTaGCAGCAAACTTTACTGTCA +
Preference number: 3 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKFELIH*QQTLLS
Trigger: TGACAGTAAAGTTTGCTGCAAGTGTATGAGTTCAAA...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAATGGTGTATAAAGCATTaGGTACATGATGATACTTGC +
Preference number: 3 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKWCIKH*VHDDTC
Trigger: GCAAGTATCATCATGTACCAAATGCTTTATACACCA...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR TCA 72 bp TTTGAGGAAACAGGTCTTAAGAACCTATCCAACACATaGTTCCATAACCAATACATCTTAGGTTGTTTTAGG +
Preference number: 3 (lower is better)
Translates to: FEETGLKNLSNT*FHNQYILGCFR
Trigger: CCTAAAACAACCTAAGATGTATTGGTTATGGAATCATGTGTTGGATAGGTTCTTAAGACCTGTTTCCTCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAACGACAGCGGGGCCACTaGGTTGGGACGGCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKERQRGH*VGTARP
Trigger: CGGCCGAGCCGTCCCAACCCAGTGGCCCCGCTGTCG...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAAGGGACAGCCGCGTCCTaGTGCGCCACAAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKEGTAAS*CATRSR
Trigger: CCGGGACCTTGTGGCGCATCAGGACGCGGCTGTCCC...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCGGCTCGGCCGGCCCCTaGCCGGGCTGTTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFGSAGP*PGCCCC
Trigger: GCAGCAACAACAGCCCGGGCAGGGGCCGGCCGAGCC...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTGGGACAGCCGCGTCCTaGTGCGCCACAAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCGTAAS*CATRSR
Trigger: CCGGGACCTTGTGGCGCATCAGGACGCGGCTGTCCC...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACTCTGCCGCGTGGATTTaGCCGCCAGGATGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHSAAWI*PPGWPD
Trigger: GTCAGGCCATCCTGGCGGTCAAATCCACGCGGCAGA...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTGAGCTGCCGGGCCTCTaGCGTCCTCTTGCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCELPGL*RPLASA
Trigger: AGCGCTCGCAAGAGGACGGCAGAGGCCCGGCAGCTC...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCCCCGGAGCTCCGAGCTaGCGGGCCTCTGCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVPGAPS*RASAVL
Trigger: GAGGACGGCAGAGGCCCGGCAGCTCGGAGCTCCGGG...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTGGCTCGGCCGGCCCCTaGCCGGGCTGTTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSGSAGP*PGCCCC
Trigger: GCAGCAACAACAGCCCGGGCAGGGGCCGGCCGAGCC...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTGGAAAAGGCGGCTCCTaGCGCCCGCACCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSGKGGS*RPHRGG
Trigger: TCCCCCGCGGTGCGGGCGCCAGGAGCCGCCTTTTCC...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR CCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGGAAAAGGCGGCTCCTaGCGCCCGCACCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVGKGGS*RPHRGG
Trigger: TCCCCCGCGGTGCGGGCGCCAGGAGCCGCCTTTTCC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR CCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTAGAGGGGCCGCCGCTTaGCTCGGCCTCTCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCRGAAA*LGLSVS
Trigger: GGAAACGGAGAGGCCGAGCCAAGCGGCGGCCCCTCT...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTGGCTGGGGTTGGGGCTaGAGCTGCGGCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSGWGWG*SCGCGC
Trigger: GCAGCCGCAGCCGCAGCTCCAGCCCCAACCCCAGCC...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTGGGACAGCCGCGTCCTaGTGCGCCACAAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSGTAAS*CATRSR
Trigger: CCGGGACCTTGTGGCGCATCAGGACGCGGCTGTCCC...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCCCGTGCGGCTGCGAGTaGGGCTGTGGGTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVPCGCE*GCGCGC
Trigger: GCACCCACACCCACAGCCGCACTCGCAGCCGCACGG...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTCCCTCGCGGCGCTTTTaGATGGGCCATCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCPSRRF*MGHLPH
Trigger: GTGGGGAAGATGGCCCATTCAAAAGCGCCGCGAGGG...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR TCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCGCACCATCTGCAGCGTaGTCTCGGCGTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFAPSAA*SRRSSP
Trigger: AGGGCTGGAACGCCGAGATCACGCTGCAGATGGTGC...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGAGCTGCCGGGCCTCTaGCGTCCTCTTGCGAGCGCT +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVELPGL*RPLASA
Trigger: AGCGCTCGCAAGAGGACGGCAGAGGCCCGGCAGCTC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTGGCTCGGCCGGCCCCTaGCCGGGCTGTTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFGSAGP*PGCCCC
Trigger: GCAGCAACAACAGCCCGGGCAGGGGCCGGCCGAGCC...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAGGCAGAGTTGGAGGTaGTGCGGAGAAGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFRQSWR*CGEAGA
Trigger: GGCACCGGCTTCTCCGCAGCACCTCCAACTCTGCCT...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTAGGCAGAGTTGGAGGTaGTGCGGAGAAGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCRQSWR*CGEAGA
Trigger: GGCACCGGCTTCTCCGCAGCACCTCCAACTCTGCCT...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTCCCCACTGCTCAGCCTaGCATCAGCCATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCPHCSA*HQPSSC
Trigger: GCAGCTGGATGGCTGATGGCAGGCTGAGCAGTGGGG...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCCCCCACTGCTCAGCCTaGCATCAGCCATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFPHCSA*HQPSSC
Trigger: GCAGCTGGATGGCTGATGGCAGGCTGAGCAGTGGGG...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTCTCACTGAAGGGCACTaGCCGGGCCCCCTCGCGGCG +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFLTEGH*PGPLAA
Trigger: CGCCGCGAGGGGGCCCGGCCAGTGCCCTTCAGTGAG...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR CCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCTCGGCGTTCCAGCCCTaGTCTTGCGGGCACCGAAAG +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFSAFQP*SCGHRK
Trigger: CTTTCGGTGCCCGCAAGACCAGGGCTGGAACGCCGA...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTGGCTGGGGTTGGGGCTaGAGCTGCGGCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFGWGWG*SCGCGC
Trigger: GCAGCCGCAGCCGCAGCTCCAGCCCCAACCCCAGCC...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTGGCTGGGGTTGGGGCTaGAGCTGCGGCTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAGWGWG*SCGCGC
Trigger: GCAGCCGCAGCCGCAGCTCCAGCCCCAACCCCAGCC...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCGTGCGGCTGTGGGTGTaGGTGCGGTATTTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFVRLWV*VRYLVR
Trigger: CCGCACCAAATACCGCACCCACACCCACAGCCGCAC...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACCCTTTCAGGCAGAGTTaGAGGTGCTGCGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHPFRQS*RCCGEA
Trigger: GGCTTCTCCGCAGCACCTCCAACTCTGCCTGAAAGG...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTCCCGGAGCTCCGAGCTaGCGGGCCTCTGCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAPGAPS*RASAVL
Trigger: GAGGACGGCAGAGGCCCGGCAGCTCGGAGCTCCGGG...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCTGCTGGACCAGGTGCTaGTGCTTCTGCCGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFCWTRC*CFCRVD
Trigger: ATCCACGCGGCAGAAGCAGCAGCACCTGGTCCAGCA...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTCCGTGCGGCTGCGAGTaGGGCTGTGGGTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAPCGCE*GCGCGC
Trigger: GCACCCACACCCACAGCCGCACTCGCAGCCGCACGG...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACCACGCCTCATTAACTTaGGGCCTTTCCAAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHHASLT*GLSKAR
Trigger: GCGGGCTTTGGAAAGGCCCCAAGTTAATGAGGCGTG...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR CCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTCTCACTGAAGGGCACTaGCCGGGCCCCCTCGCGGCG +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCALTEGH*PGPLAA
Trigger: CGCCGCGAGGGGGCCCGGCCAGTGCCCTTCAGTGAG...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR CCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTCGACAGCGGGGCCACTaGGTTGGGACGGCTCGGCCG +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCARQRGH*VGTARP
Trigger: CGGCCGAGCCGTCCCAACCCAGTGGCCCCGCTGTCG...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGCACCATCTGCAGCGTaGTCTCGGCGTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVAPSAA*SRRSSP
Trigger: AGGGCTGGAACGCCGAGATCACGCTGCAGATGGTGC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTACCGCCAGGATGGCCTaGCGATTCTTGTACTGCACC +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCTARMA*RFLYCT
Trigger: GGTGCAGTACAAGAATCGTCAGGCCATCCTGGCGGT...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTGGCTTGGGTTGGGGCTaGGGCTGGGGTTGTGATTGG +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSGLGWG*GWGCDW
Trigger: CCAATCACAACCCCAGCCTCAGCCCCAACCCAAGCC...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTGACAGGAGAATGGCGTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCDRRMA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCACGCCATTCTCCTGTC...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCGACAGGAGAATGGCGTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFDRRMA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCACGCCATTCTCCTGTC...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACGAAAGTCGATCTCCTTaGCCTCTGCCATCACCACAG +
Preference number: 4 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHESRSP*PLPSPQ
Trigger: CTGTGGTGATGGCAGAGGGCAAGGAGATCGACTTTC...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTTCGGCGTTCCAGCCCTaGTCTTGCGGGCACCGAAAG +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSSAFQP*SCGHRK
Trigger: CTTTCGGTGCCCGCAAGACCAGGGCTGGAACGCCGA...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTCCTTTCAGGCAGAGTTaGAGGTGCTGCGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCPFRQS*RCCGEA
Trigger: GGCTTCTCCGCAGCACCTCCAACTCTGCCTGAAAGG...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAACCAAACTACTTGATCTaGTGCGGGGCGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKEPNYLI*CGAERL
Trigger: CAGTCTCTCCGCCCCGCACCAGATCAAGTAGTTTGG...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAACCAGCTGCAGAGCAGTaGAGAGTAGGTCTCACCAGT +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKEPAAEQ*RVGLTS
Trigger: ACTGGTGAGACCTACTCTCCACTGCTCTGCAGCTGG...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAAGCAGCCCTTCCTCGGTaGGGATGCAACACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKEAALPR*GCNTFS
Trigger: AGAAAAAGTGTTGCATCCTCACCGAGGAAGGGCTGC...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATACCCGGAGCTCCGAGCTaGCGGGCCTCTGCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIPGAPS*RASAVL
Trigger: GAGGACGGCAGAGGCCCGGCAGCTCGGAGCTCCGGG...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAATTTTTCTTCCAGAGCTaGAACAACCCGTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKEFFFQS*NNPSLR
Trigger: GCGCAGCGACGGGTTGTTGCAGCTCTGGAAGAAAAA...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTACATGTACTTGCCCTTaGGCTCCACACAGTCCACGG +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCTCTCP*APHSPR
Trigger: CCGTGGACTGTGTGGAGCGCAAGGGCAAGTACATGT...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAATTGTACTGCACCATCTaGAGCGTGATCTCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKELYCTI*SVISAF
Trigger: GAACGCCGAGATCACGCTGCAGATGGTGCAGTACAA...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCTGCTGGACCAGGTGCTaGTGCTTCTGCCGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVCWTRC*CFCRVD
Trigger: ATCCACGCGGCAGAAGCAGCAGCACCTGGTCCAGCA...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGTCTTGCCCGGGAGCTaGCCCTTTCAGGCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVVLPGS*PFQAEL
Trigger: CAACTCTGCCTGAAAGGGGCAGCTCCCGGGCAAGAC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCCTCAAAACCTTGTCTTaGCCGGGAGCTGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFLKTLS*PGAAPF
Trigger: GAAAGGGGCAGCTCCCGGGCAAGACAAGGTTTTGAG...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTCTCAAAACCTTGTCTTaGCCGGGAGCTGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCLKTLS*PGAAPF
Trigger: GAAAGGGGCAGCTCCCGGGCAAGACAAGGTTTTGAG...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACAACTACTTGATCTGGTaGGGGGCGGAGAGACTGTTT +
Preference number: 4 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHNYLIW*GAERLF
Trigger: AAACAGTCTCTCCGCCCCGCACCAGATCAAGTAGTT...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTCACGCCTCATTAACTTaGGGCCTTTCCAAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCHASLT*GLSKAR
Trigger: GCGGGCTTTGGAAAGGCCCCAAGTTAATGAGGCGTG...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR TCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTGCACCATCTGCAGCGTaGTCTCGGCGTTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAAPSAA*SRRSSP
Trigger: AGGGCTGGAACGCCGAGATCACGCTGCAGATGGTGC...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTTCTGCCGCGTGGATTTaGCCGCCAGGATGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKASAAWI*PPGWPD
Trigger: GTCAGGCCATCCTGGCGGTCAAATCCACGCGGCAGA...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTTCTGCCGCGTGGATTTaGCCGCCAGGATGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFSAAWI*PPGWPD
Trigger: GTCAGGCCATCCTGGCGGTCAAATCCACGCGGCAGA...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTGGCTTGGGTTGGGGCTaGGGCTGGGGTTGTGATTGG +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAGLGWG*GWGCDW
Trigger: CCAATCACAACCCCAGCCTCAGCCCCAACCCAAGCC...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTCCTCTGCCGTCCTCTTaGGAGCGCTCACTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFPLPSS*ERSLKG
Trigger: GCCCTTCAGTGAGCGCTCGCAAGAGGACGGCAGAGG...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTCCTCCTTCAGCGCTTTaGAGCCGCTACTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSPPSAL*SRYSPA
Trigger: TGCTGGAGAGTAGCGGCTGCAAAGCGCTGAAGGAGG...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCTTTTTCTTCCAGAGCTaGAACAACCCGTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFFFFQS*NNPSLR
Trigger: GCGCAGCGACGGGTTGTTGCAGCTCTGGAAGAAAAA...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCGAAAGTCGATCTCCTTaGCCTCTGCCATCACCACAG +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFESRSP*PLPSPQ
Trigger: CTGTGGTGATGGCAGAGGGCAAGGAGATCGACTTTC...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCTTCCAGCCCTGGTCTTaGGGGCACCGAAAGTCGATC +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVFQPWS*GHRKSI
Trigger: GATCGACTTTCGGTGCCCGCAAGACCAGGGCTGGAA...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTTTGTACTGCACCATCTaGAGCGTGATCTCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCLYCTI*SVISAF
Trigger: GAACGCCGAGATCACGCTGCAGATGGTGCAGTACAA...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTTGCTGCTGGACCAGGTaGTGCTGCTTCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKACCWTR*CCFCRV
Trigger: CACGCGGCAGAAGCAGCAGCACCTGGTCCAGCAGCA...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTCGCGGCGCTTTTGAATaGGCCATCTTCCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFRGAFE*AIFPTP
Trigger: GGGGGTGGGGAAGATGGCCCATTCAAAAGCGCCGCG...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR CCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCCCTTTCAGGCAGAGTTaGAGGTGCTGCGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVPFRQS*RCCGEA
Trigger: GGCTTCTCCGCAGCACCTCCAACTCTGCCTGAAAGG...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGCTGAGACAGGAGAATaGCGTGAACCCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVAETGE*REPRRQ
Trigger: CTGCCTCCTGGGTTCACGCCATTCTCCTGTCTCAGC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGAAACCATTATTCTaGGGCCGGGTGTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFKKPLF*GRVWWL
Trigger: GAGCCACCACACCCGGCCCCAGAATAATGGTTTCTT...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTAAGAAACCATTATTCTaGGGCCGGGTGTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCKKPLF*GRVWWL
Trigger: GAGCCACCACACCCGGCCCCAGAATAATGGTTTCTT...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTCCTCTGCCGTCCTCTTaGGAGCGCTCACTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAPLPSS*ERSLKG
Trigger: GCCCTTCAGTGAGCGCTCGCAAGAGGACGGCAGAGG...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACTTCATGTTGGAGAAGTaGAGTTCCTTGAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHFMLEK*SSLSLT
Trigger: GGTCAAGCTCAAGGAACTGCACTTCTCCAACATGAA...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCGATCTCCTTGCCCTCTaGCATCACCACAGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFDLLAL*HHHSEV
Trigger: TACTTCACTGTGGTGATGGCAGAGGGCAAGGAGATC...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTGATCTCCTTGCCCTCTaGCATCACCACAGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCDLLAL*HHHSEV
Trigger: TACTTCACTGTGGTGATGGCAGAGGGCAAGGAGATC...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTTGCTGCTGGACCAGGTaGTGCTGCTTCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCACCWTR*CCFCRV
Trigger: CACGCGGCAGAAGCAGCAGCACCTGGTCCAGCAGCA...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTGGCTGTGGGTGTGGGTaGGGTATTTGGTGCGGATGC +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAGCGCG*GIWCGC
Trigger: GCATCCGCACCAAATACCGCACCCACACCCACAGCC...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTAGGCAGAGTTGGAGGTaGTGCGGAGAAGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCARQSWR*CGEAGA
Trigger: GGCACCGGCTTCTCCGCAGCACCTCCAACTCTGCCT...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTGTCTTGCCCGGGAGCTaGCCCTTTCAGGCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAVLPGS*PFQAEL
Trigger: CAACTCTGCCTGAAAGGGGCAGCTCCCGGGCAAGAC...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCCTCAAAACCTTGTCTTaGCCGGGAGCTGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVLKTLS*PGAAPF
Trigger: GAAAGGGGCAGCTCCCGGGCAAGACAAGGTTTTGAG...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCCCTGTTGTTAAAACCTaGTTCCCCACTGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFPVVKT*FPTAQP
Trigger: AGGCTGAGCAGTGGGGAAGCAGGTTTTAACAACAGG...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAAGAGGGGCCGCCGCTTaGCTCGGCCTCTCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIRGAAA*LGLSVS
Trigger: GGAAACGGAGAGGCCGAGCCAAGCGGCGGCCCCTCT...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTTCGGCGTTCCAGCCCTaGTCTTGCGGGCACCGAAAG +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCASAFQP*SCGHRK
Trigger: CTTTCGGTGCCCGCAAGACCAGGGCTGGAACGCCGA...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCATGAGAGTGTGGATGTaGATGTGGATGCGGATACGG +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFMRVWM*MWMRIR
Trigger: CCGTATCCGCATCCACATCCACATCCACACTCTCAT...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTCCAGCTGCAGAGCAGTaGAGAGTAGGTCTCACCAGT +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSPAAEQ*RVGLTS
Trigger: ACTGGTGAGACCTACTCTCCACTGCTCTGCAGCTGG...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR CAA 72 bp CTTGATCTGGTGCGGGGCGGAGAGACTGTTTTGCTTTaGATCCAAGTGAAGACAATAGAAATGTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LDLVRGGETVLL*IQVKTIEMCSS
Trigger: GGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGCAAAACAGTCTCTCCGCCCCGCACCAGATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTACCGCCAGGATGGCCTaGCGATTCTTGTACTGCACC +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFTARMA*RFLYCT
Trigger: GGTGCAGTACAAGAATCGTCAGGCCATCCTGGCGGT...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTCCTCCTTCAGCGCTTTaGAGCCGCTACTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAPPSAL*SRYSPA
Trigger: TGCTGGAGAGTAGCGGCTGCAAAGCGCTGAAGGAGG...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTTTCCAGCCCTGGTCTTaGGGGCACCGAAAGTCGATC +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAFQPWS*GHRKSI
Trigger: GATCGACTTTCGGTGCCCGCAAGACCAGGGCTGGAA...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTTGCTGGACCAGGTGCTaGTGCTTCTGCCGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCACWTRC*CFCRVD
Trigger: ATCCACGCGGCAGAAGCAGCAGCACCTGGTCCAGCA...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACAAGACAATAGAAATGTaGTCGTCCCACTTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHKTIEM*SSHFLK
Trigger: CTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTT...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAAAAAGGTCCTGCAGCCTaGACAGGAGTACAAATATTC +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKEKGPAA*TGVQIF
Trigger: GAATATTTGTACTCCTGTCCAGGCTGCAGGACCTTT...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAACCCTCGCGGCGCTTTTaGATGGGCCATCTTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKPSRRF*MGHLPH
Trigger: GTGGGGAAGATGGCCCATTCAAAAGCGCCGCGAGGG...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR TCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACAAGTTTTCAGTAGGGTaGTGTCCAAACTACTTGATC +
Preference number: 4 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHKFSVG*CPNYLI
Trigger: GATCAAGTAGTTTGGACATCACCCTACTGAAAACTT...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAAAACAAGGGATGTGTTTaGACTCATACACTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKENKGCV*THTLAA
Trigger: TGCTGCAAGTGTATGAGTTCAAACACATCCCTTGTT...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATACCTCTGCCGTCCTCTTaGGAGCGCTCACTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIPLPSS*ERSLKG
Trigger: GCCCTTCAGTGAGCGCTCGCAAGAGGACGGCAGAGG...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTCCTCCTTCAGCGCTTTaGAGCCGCTACTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAPPSAL*SRYSPA
Trigger: TGCTGGAGAGTAGCGGCTGCAAAGCGCTGAAGGAGG...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCTTCATGTTGGAGAAGTaGAGTTCCTTGAGCTTGACC +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFFMLEK*SSLSLT
Trigger: GGTCAAGCTCAAGGAACTGCACTTCTCCAACATGAA...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTACATGTACTTGCCCTTaGGCTCCACACAGTCCACGG +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKATCTCP*APHSPR
Trigger: CCGTGGACTGTGTGGAGCGCAAGGGCAAGTACATGT...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTGATCTCCTTGCCCTCTaGCATCACCACAGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSDLLAL*HHHSEV
Trigger: TACTTCACTGTGGTGATGGCAGAGGGCAAGGAGATC...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATATGCTGCTGGACCAGGTaGTGCTGCTTCTGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAICCWTR*CCFCRV
Trigger: CACGCGGCAGAAGCAGCAGCACCTGGTCCAGCAGCA...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCAACTACTTGATCTGGTaGGGGGCGGAGAGACTGTTT +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVNYLIW*GAERLF
Trigger: AAACAGTCTCTCCGCCCCGCACCAGATCAAGTAGTT...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCGGTTCAAGTCAAGTGTaGAAAGCTCTCGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFGSSQV*KALEER
Trigger: CCTTTCTTCGAGAGCTTTGCACACTTGACTTGAACC...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTCCTGTTGTTAAAACCTaGTTCCCCACTGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSPVVKT*FPTAQP
Trigger: AGGCTGAGCAGTGGGGAAGCAGGTTTTAACAACAGG...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCATGAGAGTGTGGATGTaGATGTGGATGCGGATACGG +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVMRVWM*MWMRIR
Trigger: CCGTATCCGCATCCACATCCACATCCACACTCTCAT...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAGACTCCTCAACAAGTaGCTTCTAAGACAAGACTGG +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFRLLNK*LLRQDW
Trigger: CCAGTCTTGTCTTAGAAGCCACTTGTTGAGGAGTCT...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTGCTGAGACAGGAGAATaGCGTGAACCCAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAAETGE*REPRRQ
Trigger: CTGCCTCCTGGGTTCACGCCATTCTCCTGTCTCAGC...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAACAATATACAGTGACCTaGAAGGACTCCCTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKEQYTVT*KDSLLL
Trigger: TAACAACAGGGAGTCCTTCCAGGTCACTGTATATTG...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTGATGTCCAAACTACTTaGTCTGGTGCGGGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCADVQTT*SGAGRR
Trigger: TCTCCGCCCCGCACCAGATCAAGTAGTTTGGACATC...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTAAAAGGAACACTCAGTaGGGCAAGAGACAGCATCTC +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSKRNTQ*GKRQHL
Trigger: GAGATGCTGTCTCTTGCCTCACTGAGTGTTCCTTTT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCCTTCTCAATATACAGTaGCCTGGAAGGACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVLLNIQ*PGRTPC
Trigger: ACAGGGAGTCCTTCCAGGTCACTGTATATTGAGAAG...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAGGCTGTGGGTGTGGGTaGGGTATTTGGTGCGGATGC +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIGCGCG*GIWCGC
Trigger: GCATCCGCACCAAATACCGCACCCACACCCACAGCC...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCACAGCATCTCCCAGATaGTGGGAAGTTACACATTTT +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFTASPR*WEVTHF
Trigger: AAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGT...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTTTATCTGCCCAACCGTaGAAGTCAATAAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSLSAQP*KSISHP
Trigger: AGGGTGGCTTATTGACTTGCACGGTTGGGCAGATAA...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTACTCCACTTAGCAAATaGCCTGCCAGCAAAGTCACA +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSTPLSK*PASKVT
Trigger: TGTGACTTTGCTGGCAGGGCATTTGCTAAGTGGAGT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAAAACCCAGAGTCCTTCTaGTTACTTCATTGGACAATA +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKENPESF*LLHWTI
Trigger: TATTGTCCAATGAAGTAAGCAGAAGGACTCTGGGTT...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACTTAATTTCAACCAGCTaGCACAACAATGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHLISTS*HNNESV
Trigger: GACACTTTCATTGTTGTGCCAGCTGGTTGAAATTAA...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACGAACTCCTTTCTAGATaGAAGGAGAATAAAGACATC +
Preference number: 4 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHELLSR*KENKDI
Trigger: GATGTCTTTATTCTCCTTCCATCTAGAAAGGAGTTC...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTCCAGCTGCAGAGCAGTaGAGAGTAGGTCTCACCAGT +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAPAAEQ*RVGLTS
Trigger: ACTGGTGAGACCTACTCTCCACTGCTCTGCAGCTGG...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTGCAGCCCTTCCTCGGTaGGGATGCAACACTTTTTCT +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAAALPR*GCNTFS
Trigger: AGAAAAAGTGTTGCATCCTCACCGAGGAAGGGCTGC...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAACCGCCAGGATGGCCTaGCGATTCTTGTACTGCACC +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAITARMA*RFLYCT
Trigger: GGTGCAGTACAAGAATCGTCAGGCCATCCTGGCGGT...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAACCTCCACAACATTTTTaGAATGAAACAGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKEPPQHF*NETANA
Trigger: TGCATTTGCTGTTTCATTTCAAAAATGTTGTGGAGG...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAAATGCTGGAAAAATACTaGCCAAGACTTTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: MIPVALLRTMATTGEEKEMLEKY*PRLSVK
Trigger: TTTCACAGAAAGTCTTGGTCAGTATTTTTCCAGCAT...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAGACAGGAGAATGGCGTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIDRRMA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCACGCCATTCTCCTGTC...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTTCAATAAGCCACCCTTaGAAACTGTGTCAAGATTTG +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCSISHP*KLCQDL
Trigger: CAAATCTTGACACAGTTTTCAAGGGTGGCTTATTGA...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATATTCCAGCCCTGGTCTTaGGGGCACCGAAAGTCGATC +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIFQPWS*GHRKSI
Trigger: GATCGACTTTCGGTGCCCGCAAGACCAGGGCTGGAA...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCCTCGAAATCGTTTCCTaGATCGTGATGAAAAGTATG +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFLEIVS*IVMKSM
Trigger: CATACTTTTCATCACGATGCAGGAAACGATTTCGAG...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGGTTCAAGTCAAGTGTaGAAAGCTCTCGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVGSSQV*KALEER
Trigger: CCTTTCTTCGAGAGCTTTGCACACTTGACTTGAACC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCCTTCGTAGGATTCTGTaGTATAAAATTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFLRRIL*YKIAPG
Trigger: ACCTGGAGCAATTTTATAGCACAGAATCCTACGAAG...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAACCCAGAGTCCTTCTaGTTACTTCATTGGACAATA +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFNPESF*LLHWTI
Trigger: TATTGTCCAATGAAGTAAGCAGAAGGACTCTGGGTT...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTCCTGTTGTTAAAACCTaGTTCCCCACTGCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFPVVKT*FPTAQP
Trigger: AGGCTGAGCAGTGGGGAAGCAGGTTTTAACAACAGG...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACACTTTGTATCATCTATaGCTCCATTTAAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHTLYHL*LHLNPS
Trigger: ACTTGGGTTTAAATGGAGCCATAGATGATACAAAGT...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTAAGAAACCATTATTCTaGGGCCGGGTGTGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAKKPLF*GRVWWL
Trigger: GAGCCACCACACCCGGCCCCAGAATAATGGTTTCTT...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTACTGTGTATGAGGCTTaGTGCCAACACAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSTVYEA*CQHKFK
Trigger: CTTGAACTTGTGTTGGCACCAAGCCTCATACACAGT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTGCATCTCCCAGATGCTaGGAAGTTACACATTTTGTC +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSASPRC*EVTHFV
Trigger: GACAAAATGTGTAACTTCCCAGCATCTGGGAGATGC...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACTTCTGCTTACTTCATTaGACAATATTGCCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHFCLLH*TILPFL
Trigger: TAGAAAGGGCAATATTGTCCAATGAAGTAAGCAGAA...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAGATGTCCAAACTACTTaGTCTGGTGCGGGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIDVQTT*SGAGRR
Trigger: TCTCCGCCCCGCACCAGATCAAGTAGTTTGGACATC...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCATGCTGGAAAAATACTaGCCAAGACTTTCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFMLEKY*PRLSVK
Trigger: TTTCACAGAAAGTCTTGGTCAGTATTTTTCCAGCAT...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTAAAAGGAACACTCAGTaGGGCAAGAGACAGCATCTC +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAKRNTQ*GKRQHL
Trigger: GAGATGCTGTCTCTTGCCTCACTGAGTGTTCCTTTT...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTAAAAGGAACACTCAGTaGGGCAAGAGACAGCATCTC +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFKRNTQ*GKRQHL
Trigger: GAGATGCTGTCTCTTGCCTCACTGAGTGTTCCTTTT...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTAACAAGGGATGTGTTTaGACTCATACACTTGCAGCA +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSNKGCV*THTLAA
Trigger: TGCTGCAAGTGTATGAGTTCAAACACATCCCTTGTT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTCTTCTCAATATACAGTaGCCTGGAAGGACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKALLNIQ*PGRTPC
Trigger: ACAGGGAGTCCTTCCAGGTCACTGTATATTGAGAAG...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAACATGTACTTGCCCTTaGGCTCCACACAGTCCACGG +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAITCTCP*APHSPR
Trigger: CCGTGGACTGTGTGGAGCGCAAGGGCAAGTACATGT...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCAAGACAATAGAAATGTaGTCGTCCCACTTCCTCAAG +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVKTIEM*SSHFLK
Trigger: CTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTT...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTGTGTATGAGGCTTGGTaGCAACACAAGTTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAVYEAW*QHKFKD
Trigger: GTCCTTGAACTTGTGTTGGCACCAAGCCTCATACAC...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTTTGAACTCATACACTTaGAGCAAACTTTACTGTCAG +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCLNSYT*SKLYCQ
Trigger: CTGACAGTAAAGTTTGCTGCAAGTGTATGAGTTCAA...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTTTATCTGCCCAACCGTaGAAGTCAATAAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFLSAQP*KSISHP
Trigger: AGGGTGGCTTATTGACTTGCACGGTTGGGCAGATAA...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTTTATCTGCCCAACCGTaGAAGTCAATAAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKALSAQP*KSISHP
Trigger: AGGGTGGCTTATTGACTTGCACGGTTGGGCAGATAA...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTACTCCACTTAGCAAATaGCCTGCCAGCAAAGTCACA +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFTPLSK*PASKVT
Trigger: TGTGACTTTGCTGGCAGGGCATTTGCTAAGTGGAGT...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTACTCCACTTAGCAAATaGCCTGCCAGCAAAGTCACA +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKATPLSK*PASKVT
Trigger: TGTGACTTTGCTGGCAGGGCATTTGCTAAGTGGAGT...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATGAGAGTGTGGATGTaGATGTGGATGCGGATACGG +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAMRVWM*MWMRIR
Trigger: CCGTATCCGCATCCACATCCACATCCACACTCTCAT...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATACCAAACTACTTGATCTaGTGCGGGGCGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIPNYLI*CGAERL
Trigger: CAGTCTCTCCGCCCCGCACCAGATCAAGTAGTTTGG...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTACACCCAGATCTAAATaGATTTCCACTAAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: LSEARDSISQMLGSYTFCTPRSK*ISTKKV
Trigger: GACTTTCTTAGTGGAAATCCATTTAGATCTGGGTGT...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR CAA 72 bp ATTATCTGCCCAACCGTGCAAGTCAATAAGCCACCCTaGAAAACTGTGTCAAGATTTGAGGAAACAGGTCTT +
Preference number: 4 (lower is better)
Translates to: IICPTVQVNKPP*KTVSRFEETGL
Trigger: AAGACCTGTTTCCTCAAATCTTGACACAGTTTTCAAGGGTGGCTTATTGACTTGCACGGTTGGGCAGATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAATTTTTCTTCCAGAGCTaGAACAACCCGTCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKFFFQS*NNPSLR
Trigger: GCGCAGCGACGGGTTGTTGCAGCTCTGGAAGAAAAA...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAGAAAGTCGATCTCCTTaGCCTCTGCCATCACCACAG +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIESRSP*PLPSPQ
Trigger: CTGTGGTGATGGCAGAGGGCAAGGAGATCGACTTTC...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTGTGTATGAGGCTTGGTaGCAACACAAGTTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAVYEAW*QHKFKD
Trigger: GTCCTTGAACTTGTGTTGGCACCAAGCCTCATACAC...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTCCCCTTATAGACATTTaGTCTTTGACGTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFPLIDI*SLTSAL
Trigger: GAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGG...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTGTACATGATGATACTTaGTTTCCAGAAGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSVHDDT*FPEAGI
Trigger: AATGCCAGCTTCTGGAAAGCAAGTATCATCATGTAC...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTAAAGGTCCTGCAGCCTaGACAGGAGTACAAATATTC +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAKGPAA*TGVQIF
Trigger: GAATATTTGTACTCCTGTCCAGGCTGCAGGACCTTT...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTAGACTCCTCAACAAGTaGCTTCTAAGACAAGACTGG +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKARLLNK*LLRQDW
Trigger: CCAGTCTTGTCTTAGAAGCCACTTGTTGAGGAGTCT...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTGCATCTCCCAGATGCTaGGAAGTTACACATTTTGTC +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAASPRC*EVTHFV
Trigger: GACAAAATGTGTAACTTCCCAGCATCTGGGAGATGC...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGGGTTGTTTTCTTACTaGAAATCCTGTGTTTATCCA +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVGLFSY*KSCVYP
Trigger: TGGATAAACACAGGATTTTCAGTAAGAAAACAACCC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTAACCTATCCAACACATaGTTCCATAACCAATACATC +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSNLSNT*FHNQYI
Trigger: GATGTATTGGTTATGGAATCATGTGTTGGATAGGTT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCAACCTATCCAACACATaGTTCCATAACCAATACATC +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVNLSNT*FHNQYI
Trigger: GATGTATTGGTTATGGAATCATGTGTTGGATAGGTT...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTCCCCTTATAGACATTTaGTCTTTGACGTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAPLIDI*SLTSAL
Trigger: GAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGG...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTTTAATTTCAACCAGCTaGCACAACAATGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSLISTS*HNNESV
Trigger: GACACTTTCATTGTTGTGCCAGCTGGTTGAAATTAA...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTAGACTCCTCAACAAGTaGCTTCTAAGACAAGACTGG +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCARLLNK*LLRQDW
Trigger: CCAGTCTTGTCTTAGAAGCCACTTGTTGAGGAGTCT...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTGAACTCCTTTCTAGATaGAAGGAGAATAAAGACATC +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSELLSR*KENKDI
Trigger: GATGTCTTTATTCTCCTTCCATCTAGAAAGGAGTTC...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTACACCCAGATCTAAATaGATTTCCACTAAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSTPRSK*ISTKKV
Trigger: GACTTTCTTAGTGGAAATCCATTTAGATCTGGGTGT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATACTTCTCAATATACAGTaGCCTGGAAGGACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAILLNIQ*PGRTPC
Trigger: ACAGGGAGTCCTTCCAGGTCACTGTATATTGAGAAG...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTAGGGATCAGAAAATGTaGTTCAAGTCAAGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFRDQKM*FKSSVQ
Trigger: TTGCACACTTGACTTGAACCACATTTTCTGATCCCT...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCACTTTGTATCATCTATaGCTCCATTTAAACCCAAGT +
Preference number: 4 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVTLYHL*LHLNPS
Trigger: ACTTGGGTTTAAATGGAGCCATAGATGATACAAAGT...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTTTCTGCTTACTTCATTaGACAATATTGCCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSFCLLH*TILPFL
Trigger: TAGAAAGGGCAATATTGTCCAATGAAGTAAGCAGAA...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTCAATATACAGTGACCTaGAAGGACTCCCTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAQYTVT*KDSLLL
Trigger: TAACAACAGGGAGTCCTTCCAGGTCACTGTATATTG...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
3UTR CAA 72 bp AACTTCATCATGATGTTTAGCCTGTCCCAGAATTCATaGTTCTCAGGGAATGACATGAGAGCAAAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: NFIMMFSLSQNS*FSGNDMRAKKR
Trigger: CCTTTTCTTTGCTCTCATGTCATTCCCTGAGAACAATGAATTCTGGGACAGGCTAAACATCATGATGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTGGGTTGTTTTCTTACTaGAAATCCTGTGTTTATCCA +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFGLFSY*KSCVYP
Trigger: TGGATAAACACAGGATTTTCAGTAAGAAAACAACCC...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTGGGTTGTTTTCTTACTaGAAATCCTGTGTTTATCCA +
Preference number: 4 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAGLFSY*KSCVYP
Trigger: TGGATAAACACAGGATTTTCAGTAAGAAAACAACCC...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTTCAATAAGCCACCCTTaGAAACTGTGTCAAGATTTG +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCASISHP*KLCQDL
Trigger: CAAATCTTGACACAGTTTTCAAGGGTGGCTTATTGA...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTTTGAACTCATACACTTaGAGCAAACTTTACTGTCAG +
Preference number: 4 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFLNSYT*SKLYCQ
Trigger: CTGACAGTAAAGTTTGCTGCAAGTGTATGAGTTCAA...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTGTACATGATGATACTTaGTTTCCAGAAGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAVHDDT*FPEAGI
Trigger: AATGCCAGCTTCTGGAAAGCAAGTATCATCATGTAC...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTAGGGATCAGAAAATGTaGTTCAAGTCAAGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCARDQKM*FKSSVQ
Trigger: TTGCACACTTGACTTGAACCACATTTTCTGATCCCT...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTAACCTATCCAACACATaGTTCCATAACCAATACATC +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCANLSNT*FHNQYI
Trigger: GATGTATTGGTTATGGAATCATGTGTTGGATAGGTT...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAACAGCATCTCCCAGATaGTGGGAAGTTACACATTTT +
Preference number: 4 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKTASPR*WEVTHF
Trigger: AAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGT...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAACAGCATCTCCCAGATaGTGGGAAGTTACACATTTT +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAITASPR*WEVTHF
Trigger: AAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGT...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTGAACTCCTTTCTAGATaGAAGGAGAATAAAGACATC +
Preference number: 4 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAELLSR*KENKDI
Trigger: GATGTCTTTATTCTCCTTCCATCTAGAAAGGAGTTC...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAACAATATACAGTGACCTaGAAGGACTCCCTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKQYTVT*KDSLLL
Trigger: TAACAACAGGGAGTCCTTCCAGGTCACTGTATATTG...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAACTTCGTAGGATTCTGTaGTATAAAATTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKLRRIL*YKIAPG
Trigger: ACCTGGAGCAATTTTATAGCACAGAATCCTACGAAG...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATACTTCGTAGGATTCTGTaGTATAAAATTGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAILRRIL*YKIAPG
Trigger: ACCTGGAGCAATTTTATAGCACAGAATCCTACGAAG...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAAACCCAGAGTCCTTCTaGTTACTTCATTGGACAATA +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAINPESF*LLHWTI
Trigger: TATTGTCCAATGAAGTAAGCAGAAGGACTCTGGGTT...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAGTACATGATGATACTTaGTTTCCAGAAGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKVHDDT*FPEAGI
Trigger: AATGCCAGCTTCTGGAAAGCAAGTATCATCATGTAC...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR TCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATACCTCCACAACATTTTTaGAATGAAACAGCAAATGCA +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIPPQHF*NETANA
Trigger: TGCATTTGCTGTTTCATTTCAAAAATGTTGTGGAGG...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR GCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAATTGAACTCATACACTTaGAGCAAACTTTACTGTCAG +
Preference number: 4 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKLNSYT*SKLYCQ
Trigger: CTGACAGTAAAGTTTGCTGCAAGTGTATGAGTTCAA...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATATTAATTTCAACCAGCTaGCACAACAATGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAILISTS*HNNESV
Trigger: GACACTTTCATTGTTGTGCCAGCTGGTTGAAATTAA...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAACACCCAGATCTAAATaGATTTCCACTAAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAITPRSK*ISTKKV
Trigger: GACTTTCTTAGTGGAAATCCATTTAGATCTGGGTGT...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CCA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAATTCTGCTTACTTCATTaGACAATATTGCCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKFCLLH*TILPFL
Trigger: TAGAAAGGGCAATATTGTCCAATGAAGTAAGCAGAA...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 90 bp CACAAGGTCCCGGAGCTCCGAGCTGCCGGGCCTCTGCCGTCCTCTTaGGAGCGCTCACTGAAGGGCACTGGCCGGGCCCCCTCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: HKVPELRAAGPLPSS*ERSLKGTGRAPSRR
Trigger: GCGCCGCGAGGGGGCCCGGCCAGTGCCCTTCAGTGAGCGCTCGCAAGAGGACGGCAGAGGCCCGGCAGCTCGGAGCTCCGGGACCTTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS GCA 90 bp CTGGCGACAGCGGGGCCACTGGGTTGGGACGGCTCGGCCGGCCCCTaGCCGGGCTGTTGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LATAGPLGWDGSAGP*PGCCCCCCCCCCCC
Trigger: GCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAGCCCGGGCAGGGGCCGGCCGAGCCGTCCCAACCCAGTGGCCCCGCTGTCGCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS TCA 90 bp AGCTCCGAGCTGCCGGGCCTCTGCCGTCCTCTTGCGAGCGCTCACTaGAGGGCACTGGCCGGGCCCCCTCGCGGCGCTTTTGAATGGGCC +
Preference number: 5 (lower is better)
Translates to: SSELPGLCRPLASAH*RALAGPPRGAFEWA
Trigger: GGCCCATTCAAAAGCGCCGCGAGGGGGCCCGGCCAGTGCCCTTCAGTGAGCGCTCGCAAGAGGACGGCAGAGGCCCGGCAGCTCGGAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS GCA 90 bp GGACAGCCGCGTCCTGATGCGCCACAAGGTCCCGGAGCTCCGAGCTaGCGGGCCTCTGCCGTCCTCTTGCGAGCGCTCACTGAAGGGCAC +
Preference number: 5 (lower is better)
Translates to: GQPRPDAPQGPGAPS*RASAVLLRALTEGH
Trigger: GTGCCCTTCAGTGAGCGCTCGCAAGAGGACGGCAGAGGCCCGGCAGCTCGGAGCTCCGGGACCTTGTGGCGCATCAGGACGCGGCTGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 90 bp GGTTGGGACGGCTCGGCCGGCCCCTGCCCGGGCTGTTGTTGCTGCTaGTGCTGCTGCTGTTGCTGCTGCTGCTGCTGGTGTTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GWDGSAGPCPGCCCC*CCCCCCCCCWCCSC
Trigger: GCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAGCCCGGGCAGGGGCCGGCCGAGCCGTCCCAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 90 bp CTGGGTTGGGACGGCTCGGCCGGCCCCTGCCCGGGCTGTTGTTGCTaGTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGGTGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LGWDGSAGPCPGCCC*CCCCCCCCCCWCCS
Trigger: GCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAGCCCGGGCAGGGGCCGGCCGAGCCGTCCCAACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 90 bp CCACTGGGTTGGGACGGCTCGGCCGGCCCCTGCCCGGGCTGTTGTTaGTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: PLGWDGSAGPCPGCC*CCCCCCCCCCCWCC
Trigger: GCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAGCCCGGGCAGGGGCCGGCCGAGCCGTCCCAACCCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 90 bp TTGTCTTGCCCGGGAGCTGCCCCTTTCAGGCAGAGTTGGAGGTGCTaGGGAGAAGCCGGTGCCCGTGCGGCTGCGAGTGCGGCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: LSCPGAAPFRQSWRC*GEAGARAAASAAVG
Trigger: ACCCACAGCCGCACTCGCAGCCGCACGGGCACCGGCTTCTCCGCAGCACCTCCAACTCTGCCTGAAAGGGGCAGCTCCCGGGCAAGACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 90 bp ACCTTGTCTTGCCCGGGAGCTGCCCCTTTCAGGCAGAGTTGGAGGTaGTGCGGAGAAGCCGGTGCCCGTGCGGCTGCGAGTGCGGCTGTG +
Preference number: 5 (lower is better)
Translates to: TLSCPGAAPFRQSWR*CGEAGARAAASAAV
Trigger: CACAGCCGCACTCGCAGCCGCACGGGCACCGGCTTCTCCGCAGCACCTCCAACTCTGCCTGAAAGGGGCAGCTCCCGGGCAAGACAAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 90 bp GCCGGCCCCTGCCCGGGCTGTTGTTGCTGCTGCTGCTGCTGCTGTTaGTGCTGCTGCTGCTGGTGTTGCAGCTGCTTGGGCGGGATAAGC +
Preference number: 5 (lower is better)
Translates to: AGPCPGCCCCCCCCC*CCCCWCCSCLGGIS
Trigger: GCTTATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAGCCCGGGCAGGGGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 90 bp GGCCCCTGCCCGGGCTGTTGTTGCTGCTGCTGCTGCTGCTGTTGCTaGTGCTGCTGCTGGTGTTGCAGCTGCTTGGGCGGGATAAGCAGC +
Preference number: 5 (lower is better)
Translates to: GPCPGCCCCCCCCCC*CCCWCCSCLGGISS
Trigger: GCTGCTTATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAGCCCGGGCAGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS CCA 90 bp CTCAAAACCTTGTCTTGCCCGGGAGCTGCCCCTTTCAGGCAGAGTTaGAGGTGCTGCGGAGAAGCCGGTGCCCGTGCGGCTGCGAGTGCG +
Preference number: 5 (lower is better)
Translates to: LKTLSCPGAAPFRQS*RCCGEAGARAAASA
Trigger: CGCACTCGCAGCCGCACGGGCACCGGCTTCTCCGCAGCACCTCCAACTCTGCCTGAAAGGGGCAGCTCCCGGGCAAGACAAGGTTTTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 90 bp TGCCCGGGCTGTTGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTaGTGCTGGTGTTGCAGCTGCTTGGGCGGGATAAGCAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: CPGCCCCCCCCCCCC*CWCCSCLGGISSSP
Trigger: AGGGCTGCTGCTTATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAGCCCGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 90 bp TGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGGTGTTaGAGCTGCTTGGGCGGGATAAGCAGCAGCCCTTCCTCGGTGAGG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCWC*SCLGGISSSPSSVR
Trigger: CCTCACCGAGGAAGGGCTGCTGCTTATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS CCA 90 bp GGCTGTTGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTaGTGTTGCAGCTGCTTGGGCGGGATAAGCAGCAGCCCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: GCCCCCCCCCCCCCC*CCSCLGGISSSPSS
Trigger: CGAGGAAGGGCTGCTGCTTATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 90 bp TTGCCCTTGCGCTCCACACAGTCCACGGTCTTCATGTTGGAGAAGTaGAGTTCCTTGAGCTTGACCGGCGGCTCGAGGCTGGCGACAGCG +
Preference number: 5 (lower is better)
Translates to: LPLRSTQSTVFMLEK*SSLSLTGGSRLATA
Trigger: CGCTGTCGCCAGCCTCGAGCCGCCGGTCAAGCTCAAGGAACTGCACTTCTCCAACATGAAGACCGTGGACTGTGTGGAGCGCAAGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS TCA 90 bp AGGTGCTGCTGCTTCTGCCGCGTGGATTTGACCGCCAGGATGGCCTaGCGATTCTTGTACTGCACCATCTGCAGCGTGATCTCGGCGTTC +
Preference number: 5 (lower is better)
Translates to: RCCCFCRVDLTARMA*RFLYCTICSVISAF
Trigger: GAACGCCGAGATCACGCTGCAGATGGTGCAGTACAAGAATCGTCAGGCCATCCTGGCGGTCAAATCCACGCGGCAGAAGCAGCAGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTAAGAGGGGCCGCCGCTaGGCTCGGCCTCTCCGTTTC +
Preference number: 5 (lower is better)
Translates to: LSEARDSISQMLGSYTFCKRGRR*ARPLRF
Trigger: GAAACGGAGAGGCCGAGCCAAGCGGCGGCCCCTCTT...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACCCCTCCTTCAGCGCTTaGCAGCCGCTACTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHPSFSA*QPLLSS
Trigger: GCTGGAGAGTAGCGGCTGCAAAGCGCTGAAGGAGGG...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACTGGTGTTGCAGCTGCTaGGGCGGGATAAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHWCCSC*GGISSS
Trigger: GCTGCTGCTTATCCCGCCCAAGCAGCTGCAACACCA...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAATGCAGTTCCTTGAGCTaGACCGGCGGCTCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: MIPVALLRTMATTGEEKECSSLS*TGGSRL
Trigger: CAGCCTCGAGCCGCCGGTCAAGCTCAAGGAACTGCA...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCGAGAAGTGCAGTTCCTaGAGCTTGACCGGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFEKCSS*SLTGGS
Trigger: CGAGCCGCCGGTCAAGCTCAAGGAACTGCACTTCTC...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCGTTCCAGCCCTGGTCTaGCGGGCACCGAAAGTCGAT +
Preference number: 5 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFVPALV*RAPKVD
Trigger: ATCGACTTTCGGTGCCCGCAAGACCAGGGCTGGAAC...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCCCCTTTCAGGCAGAGTaGGAGGTGCTGCGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFPFQAE*EVLRRS
Trigger: GCTTCTCCGCAGCACCTCCAACTCTGCCTGAAAGGG...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTGCACGCCTCATTAACTaGGGGCCTTTCCAAAGCCCG +
Preference number: 5 (lower is better)
Translates to: LSEARDSISQMLGSYTFCARLIN*GPFQSP
Trigger: CGGGCTTTGGAAAGGCCCCAAGTTAATGAGGCGTGC...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTAAGAGGGGCCGCCGCTaGGCTCGGCCTCTCCGTTTC +
Preference number: 5 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAKRGRR*ARPLRF
Trigger: GAAACGGAGAGGCCGAGCCAAGCGGCGGCCCCTCTT...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCCTGCTGCTGCTGGTGTaGCAGCTGCTTGGGCGGGAT +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVLLLLV*QLLGRD
Trigger: ATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAG...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCTGCAGTTCCTTGAGCTaGACCGGCGGCTCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVCSSLS*TGGSRL
Trigger: CAGCCTCGAGCCGCCGGTCAAGCTCAAGGAACTGCA...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACGTGAAGTACATGTACTaGCCCTTGCGCTCCACACAG +
Preference number: 5 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHVKYMY*PLRSTQ
Trigger: CTGTGTGGAGCGCAAGGGCAAGTACATGTACTTCAC...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTCAAGTCCTCAAAACCTaGTCTTGCCCGGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LSEARDSISQMLGSYTFCQVLKT*SCPGAA
Trigger: GGCAGCTCCCGGGCAAGACAAGGTTTTGAGGACTTG...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAAGGAGCGGGTCTTCTATaGGATCTGCCCTTTCGGTTG +
Preference number: 5 (lower is better)
Translates to: MIPVALLRTMATTGEEKEGAGLL*DLPFRL
Trigger: CAACCGAAAGGGCAGATCCAATAGAAGACCCGCTCC...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTGCCTCTGCCGTCCTCTaGCGAGCGCTCACTGAAGGG +
Preference number: 5 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAASAVL*RALTEG
Trigger: CCCTTCAGTGAGCGCTCGCAAGAGGACGGCAGAGGC...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTGAGAAGTGCAGTTCCTaGAGCTTGACCGGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSEKCSS*SLTGGS
Trigger: CGAGCCGCCGGTCAAGCTCAAGGAACTGCACTTCTC...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGTTCCAGCCCTGGTCTaGCGGGCACCGAAAGTCGAT +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVVPALV*RAPKVD
Trigger: ATCGACTTTCGGTGCCCGCAAGACCAGGGCTGGAAC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACTGGAAGGACTCCCTGTaGTTAAAACCTGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHWKDSL*LKPASP
Trigger: TGGGGAAGCAGGTTTTAACAACAGGGAGTCCTTCCA...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGCACGCCTCATTAACTaGGGGCCTTTCCAAAGCCCG +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVARLIN*GPFQSP
Trigger: CGGGCTTTGGAAAGGCCCCAAGTTAATGAGGCGTGC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTCCCTCCTTCAGCGCTTaGCAGCCGCTACTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAPSFSA*QPLLSS
Trigger: GCTGGAGAGTAGCGGCTGCAAAGCGCTGAAGGAGGG...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTCTGCTGCTGCTGGTGTaGCAGCTGCTTGGGCGGGAT +
Preference number: 5 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKALLLLV*QLLGRD
Trigger: ATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAG...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCTCCACGGTCTTCATGTaGGAGAAGTGCAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFSTVFM*EKCSSL
Trigger: CAAGGAACTGCACTTCTCCAACATGAAGACCGTGGA...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCTACATGTACTTGCCCTaGCGCTCCACACAGTCCACG +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVYMYLP*RSTQST
Trigger: CGTGGACTGTGTGGAGCGCAAGGGCAAGTACATGTA...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTCGAAAGTCGATCTCCTaGCCCTCTGCCATCACCACA +
Preference number: 5 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSRKSIS*PSAITT
Trigger: TGTGGTGATGGCAGAGGGCAAGGAGATCGACTTTCG...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTCCCTTTCAGGCAGAGTaGGAGGTGCTGCGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAPFQAE*EVLRRS
Trigger: GCTTCTCCGCAGCACCTCCAACTCTGCCTGAAAGGG...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGGAGCGGGTCTTCTATaGGATCTGCCCTTTCGGTTG +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVGAGLL*DLPFRL
Trigger: CAACCGAAAGGGCAGATCCAATAGAAGACCCGCTCC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACATAGACATTTGCTCTTaGACGTCAGCACTCCCCATA +
Preference number: 5 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHIDICS*TSALPI
Trigger: TATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTAT...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCTGGAAGGACTCCCTGTaGTTAAAACCTGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFWKDSL*LKPASP
Trigger: TGGGGAAGCAGGTTTTAACAACAGGGAGTCCTTCCA...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTGTGAAGTACATGTACTaGCCCTTGCGCTCCACACAG +
Preference number: 5 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSVKYMY*PLRSTQ
Trigger: CTGTGTGGAGCGCAAGGGCAAGTACATGTACTTCAC...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTCCTCAAAACCTTGTCTaGCCCGGGAGCTGCCCCTTT +
Preference number: 5 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFPQNLV*PGSCPF
Trigger: AAAGGGGCAGCTCCCGGGCAAGACAAGGTTTTGAGG...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAATTGTCCCAACAGTTATaGAGCTCACTGTGTATGAGG +
Preference number: 5 (lower is better)
Translates to: MIPVALLRTMATTGEEKELSQQL*SSLCMR
Trigger: CCTCATACACAGTGAGCTCAATAACTGTTGGGACAA...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAAATAGACATTTGCTCTTaGACGTCAGCACTCCCCATA +
Preference number: 5 (lower is better)
Translates to: MIPVALLRTMATTGEEKEIDICS*TSALPI
Trigger: TATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTAT...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCGCCCCTTATAGACATTaGCTCTTTGACGTCAGCACT +
Preference number: 5 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFAPYRH*LFDVST
Trigger: AGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGC...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATACCCCTCGCGGCGCTTTaGAATGGGCCATCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIPLAAL*NGPSSP
Trigger: TGGGGAAGATGGCCCATTCAAAAGCGCCGCGAGGGG...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAACCCCTCGCGGCGCTTTaGAATGGGCCATCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKPLAAL*NGPSSP
Trigger: TGGGGAAGATGGCCCATTCAAAAGCGCCGCGAGGGG...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAACCCTCCTTCAGCGCTTaGCAGCCGCTACTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKPSFSA*QPLLSS
Trigger: GCTGGAGAGTAGCGGCTGCAAAGCGCTGAAGGAGGG...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATATGCAGTTCCTTGAGCTaGACCGGCGGCTCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAICSSLS*TGGSRL
Trigger: CAGCCTCGAGCCGCCGGTCAAGCTCAAGGAACTGCA...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTTCCACGGTCTTCATGTaGGAGAAGTGCAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSSTVFM*EKCSSL
Trigger: CAAGGAACTGCACTTCTCCAACATGAAGACCGTGGA...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTTACATGTACTTGCCCTaGCGCTCCACACAGTCCACG +
Preference number: 5 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAYMYLP*RSTQST
Trigger: CGTGGACTGTGTGGAGCGCAAGGGCAAGTACATGTA...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTTTGTCCTTCCTTCCTTaGTCCCAACAGTTATTGAGC +
Preference number: 5 (lower is better)
Translates to: LSEARDSISQMLGSYTFCLSFLP*SQQLLS
Trigger: GCTCAATAACTGTTGGGACAAAGGAAGGAAGGACAA...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAATGGTGTTGCAGCTGCTaGGGCGGGATAAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKWCCSC*GGISSS
Trigger: GCTGCTGCTTATCCCGCCCAAGCAGCTGCAACACCA...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATATGGTGTTGCAGCTGCTaGGGCGGGATAAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIWCCSC*GGISSS
Trigger: GCTGCTGCTTATCCCGCCCAAGCAGCTGCAACACCA...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAGAGAAGTGCAGTTCCTaGAGCTTGACCGGCGGCTCG +
Preference number: 5 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKEKCSS*SLTGGS
Trigger: CGAGCCGCCGGTCAAGCTCAAGGAACTGCACTTCTC...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTTACATGTACTTGCCCTaGCGCTCCACACAGTCCACG +
Preference number: 5 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAYMYLP*RSTQST
Trigger: CGTGGACTGTGTGGAGCGCAAGGGCAAGTACATGTA...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGCCCCTTATAGACATTaGCTCTTTGACGTCAGCACT +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVAPYRH*LFDVST
Trigger: AGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp AGGGCCCCTTATAGACATTTGCTCTTTGACGTCAGCACTCCCCATAGAGCACACAAACTGTGTCAAGATTaGAGGAAACAGGTCTTAAGA +
Preference number: 5 (lower is better)
Translates to: RAPYRHLLFDVSTPHRAHKLCQD*RKQVLR
Trigger: TCTTAAGACCTGTTTCCTCAAATCTTGACACAGTTT...GTGTGCTCTATGGGGAGTGCTGACGTCAAAGAGCAAATGTCTATAAGGGGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAACTTCTGCTTACTTCATaGGACAATATTGCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: MIPVALLRTMATTGEEKELLLTS*DNIALS
Trigger: AGAAAGGGCAATATTGTCCAATGAAGTAAGCAGAAG...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTTCCACGGTCTTCATGTaGGAGAAGTGCAGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFSTVFM*EKCSSL
Trigger: CAAGGAACTGCACTTCTCCAACATGAAGACCGTGGA...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTGTGAAGTACATGTACTaGCCCTTGCGCTCCACACAG +
Preference number: 5 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAVKYMY*PLRSTQ
Trigger: CTGTGTGGAGCGCAAGGGCAAGTACATGTACTTCAC...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAACCTCAAAACCTTGTCTaGCCCGGGAGCTGCCCCTTT +
Preference number: 5 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKPQNLV*PGSCPF
Trigger: AAAGGGGCAGCTCCCGGGCAAGACAAGGTTTTGAGG...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTTTGTCCCAACAGTTATaGAGCTCACTGTGTATGAGG +
Preference number: 5 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSLSQQL*SSLCMR
Trigger: CCTCATACACAGTGAGCTCAATAACTGTTGGGACAA...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCTTGTCCCAACAGTTATaGAGCTCACTGTGTATGAGG +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVLSQQL*SSLCMR
Trigger: CCTCATACACAGTGAGCTCAATAACTGTTGGGACAA...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGGGAAGTTACACATTTaGTCCTTCCTTCCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVGKLHI*SFLPLS
Trigger: GGACAAAGGAAGGAAGGACAAAATGTGTAACTTCCC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTGGGAAGTTACACATTTaGTCCTTCCTTCCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSGKLHI*SFLPLS
Trigger: GGACAAAGGAAGGAAGGACAAAATGTGTAACTTCCC...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTCTGTCCCAGAATTCATaGTTCTCAGGGAATGACATG +
Preference number: 5 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSLSQNS*FSGNDM
Trigger: CATGTCATTCCCTGAGAACAATGAATTCTGGGACAG...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCCTGTCCCAGAATTCATaGTTCTCAGGGAATGACATG +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVLSQNS*FSGNDM
Trigger: CATGTCATTCCCTGAGAACAATGAATTCTGGGACAG...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCTTAGAGAATCCCAGCTaGCTCAATGAGGAAAATGTT +
Preference number: 5 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFLENPS*LNEENV
Trigger: AACATTTTCCTCATTGAGCAAGCTGGGATTCTCTAA...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATGATTCCGGTGGCCCTATTAAGAACCATGGCCACCACGGGCGAAGAAAAAGAATTTGAACTCATACACTaGCAGCAAACTTTACTGTCA +
Preference number: 5 (lower is better)
Translates to: MIPVALLRTMATTGEEKEFELIH*QQTLLS
Trigger: TGACAGTAAAGTTTGCTGCAAGTGTATGAGTTCAAA...TTCTTTTTCTTCGCCCGTGGTGGCCATGGTTCTTAATAGGGCCACCGGAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAACGAAAGTCGATCTCCTaGCCCTCTGCCATCACCACA +
Preference number: 5 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKRKSIS*PSAITT
Trigger: TGTGGTGATGGCAGAGGGCAAGGAGATCGACTTTCG...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATACGAAAGTCGATCTCCTaGCCCTCTGCCATCACCACA +
Preference number: 5 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIRKSIS*PSAITT
Trigger: TGTGGTGATGGCAGAGGGCAAGGAGATCGACTTTCG...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTAGCCCCAAGAGGACTTaGTATCATCTATGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKASPKRT*YHLWLH
Trigger: ATGGAGCCATAGATGATACAAAGTCCTCTTGGGGCT...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTAAAAGTAATTTGACCTaGGAACTCCTTTCTAGATGG +
Preference number: 5 (lower is better)
Translates to: LSEARDSISQMLGSYTFCKSNLT*ELLSRW
Trigger: CCATCTAGAAAGGAGTTCCAAGGTCAAATTACTTTT...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCTTTCCCTGCAACTTTTaGGATATGAGTTATGATCTC +
Preference number: 5 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFFPCNF*DMSYDL
Trigger: GAGATCATAACTCATATCCAAAAAGTTGCAGGGAAA...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTAAACAAGGGATGTGTTaGAACTCATACACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSKQGMC*NSYTCS
Trigger: GCTGCAAGTGTATGAGTTCAAACACATCCCTTGTTT...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTTTCTGTGCTATAAAATaGCTCCAGGTTCAAGTCTTA +
Preference number: 5 (lower is better)
Translates to: LSEARDSISQMLGSYTFCFCAIK*LQVQVL
Trigger: TAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp CTCAGTGAGGCAAGAGACAGCATCTCCCAGATGCTGGGAAGTTACACATTTTGTAAACTGTGTCAAGATTaGAGGAAACAGGTCTTAAGA +
Preference number: 5 (lower is better)
Translates to: LSEARDSISQMLGSYTFCKLCQD*RKQVLR
Trigger: TCTTAAGACCTGTTTCCTCAAATCTTGACACAGTTT...ACAAAATGTGTAACTTCCCAGCATCTGGGAGATGCTGTCTCTTGCCTCACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GTCCCAACAGTTATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCTGGTGTATAAAGCATTaGGTACATGATGATACTTGC +
Preference number: 5 (lower is better)
Translates to: VPTVIELTVYEAWCQHKFWCIKH*VHDDTC
Trigger: GCAAGTATCATCATGTACCAAATGCTTTATACACCA...GAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAATAACTGTTGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTTTGTCCTTCCTTCCTTaGTCCCAACAGTTATTGAGC +
Preference number: 5 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKALSFLP*SQQLLS
Trigger: GCTCAATAACTGTTGGGACAAAGGAAGGAAGGACAA...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTCTGTCCCAGAATTCATaGTTCTCAGGGAATGACATG +
Preference number: 5 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFLSQNS*FSGNDM
Trigger: CATGTCATTCCCTGAGAACAATGAATTCTGGGACAG...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCTTAGAGAATCCCAGCTaGCTCAATGAGGAAAATGTT +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVLENPS*LNEENV
Trigger: AACATTTTCCTCATTGAGCAAGCTGGGATTCTCTAA...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCGCCGAGGACATTTTATaGGTAAAGCAAAAACCAGTT +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVAEDIL*VKQKPV
Trigger: AACTGGTTTTTGCTTTACCAATAAAATGTCCTCGGC...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCAAAAGTAATTTGACCTaGGAACTCCTTTCTAGATGG +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVKSNLT*ELLSRW
Trigger: CCATCTAGAAAGGAGTTCCAAGGTCAAATTACTTTT...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp GCTTTTGATCCAAGTGAAGACAATAGAAATGTGCTCGTCCCACTTCCTCAAGTCTTTCCCTGCAACTTTTaGGATATGAGTTATGATCTC +
Preference number: 5 (lower is better)
Translates to: AFDPSEDNRNVLVPLPQVFPCNF*DMSYDL
Trigger: GAGATCATAACTCATATCCAAAAAGTTGCAGGGAAA...GACTTGAGGAAGTGGGACGAGCACATTTCTATTGTCTTCACTTGGATCAAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATTGAGCTCACTGTGTATGAGGCTTGGTGCCAACACAAGTTCAAGGACAAAAGTTTCTGTGCTATAAAATaGCTCCAGGTTCAAGTCTTA +
Preference number: 5 (lower is better)
Translates to: IELTVYEAWCQHKFKDKSFCAIK*LQVQVL
Trigger: TAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA...ACTTTTGTCCTTGAACTTGTGTTGGCACCAAGCCTCATACACAGTGAGCTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAAGCCCCAAGAGGACTTaGTATCATCTATGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAISPKRT*YHLWLH
Trigger: ATGGAGCCATAGATGATACAAAGTCCTCTTGGGGCT...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp TTGTATCATCTATGGCTCCATTTAAACCCAAGTAGCATCTGTCCTGGTGGATTTGAGACTGTTTTGCTTTaGATCCAAGTGAAGACAATA +
Preference number: 5 (lower is better)
Translates to: LYHLWLHLNPSSICPGGFETVLL*IQVKTI
Trigger: TATTGTCTTCACTTGGATCAAAAGCAAAACAGTCTC...AAATCCACCAGGACAGATGCTACTTGGGTTTAAATGGAGCCATAGATGATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATATTGTCCTTCCTTCCTTaGTCCCAACAGTTATTGAGC +
Preference number: 5 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAILSFLP*SQQLLS
Trigger: GCTCAATAACTGTTGGGACAAAGGAAGGAAGGACAA...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTTTCTGTGCTATAAAATaGCTCCAGGTTCAAGTCTTA +
Preference number: 5 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAFCAIK*LQVQVL
Trigger: TAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp TTCTGTGCTATAAAATTGCTCCAGGTTCAAGTCTTAGACCACTCTTCTAAGGCTAAACTGTGTCAAGATTaGAGGAAACAGGTCTTAAGA +
Preference number: 5 (lower is better)
Translates to: FCAIKLLQVQVLDHSSKAKLCQD*RKQVLR
Trigger: TCTTAAGACCTGTTTCCTCAAATCTTGACACAGTTT...AGCCTTAGAAGAGTGGTCTAAGACTTGAACCTGGAGCAATTTTATAGCACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTGTCAATAAGCCACCCTaGAAAACTGTGTCAAGATTT +
Preference number: 5 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAVNKPP*KTVSRF
Trigger: AAATCTTGACACAGTTTTCAAGGGTGGCTTATTGAC...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTAAAAGTAATTTGACCTaGGAACTCCTTTCTAGATGG +
Preference number: 5 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAKSNLT*ELLSRW
Trigger: CCATCTAGAAAGGAGTTCCAAGGTCAAATTACTTTT...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp CACACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTTTTGAACTCATACACTaGCAGCAAACTTTACTGTCA +
Preference number: 5 (lower is better)
Translates to: HTKKKTNVHSPIFVGFCAFELIH*QQTLLS
Trigger: TGACAGTAAAGTTTGCTGCAAGTGTATGAGTTCAAA...AGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAAAACAAGGGATGTGTTaGAACTCATACACTTGCAGC +
Preference number: 5 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIKQGMC*NSYTCS
Trigger: GCTGCAAGTGTATGAGTTCAAACACATCCCTTGTTT...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAGCCGAGGACATTTTATaGGTAAAGCAAAAACCAGTT +
Preference number: 5 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIAEDIL*VKQKPV
Trigger: AACTGGTTTTTGCTTTACCAATAAAATGTCCTCGGC...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAAGTCAATAAGCCACCCTaGAAAACTGTGTCAAGATTT +
Preference number: 5 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKVNKPP*KTVSRF
Trigger: AAATCTTGACACAGTTTTCAAGGGTGGCTTATTGAC...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATACTTCTGCTTACTTCATaGGACAATATTGCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAILLLTS*DNIALS
Trigger: AGAAAGGGCAATATTGTCCAATGAAGTAAGCAGAAG...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATAGAGACTGTTTTGCTTTaGATCCAAGTGAAGACAATA +
Preference number: 5 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIETVLL*IQVKTI
Trigger: TATTGTCTTCACTTGGATCAAAAGCAAAACAGTCTC...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAATTTCCCTGCAACTTTTaGGATATGAGTTATGATCTC +
Preference number: 5 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKFPCNF*DMSYDL
Trigger: GAGATCATAACTCATATCCAAAAAGTTGCAGGGAAA...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ACGAAAAAGAAAACAAATGTTCACAGTCCTATCTTCGTAGGATTCTGTGCTATATTCCATGAAGCTGATTaGTCAGGCTTCAAAATATCT +
Preference number: 5 (lower is better)
Translates to: TKKKTNVHSPIFVGFCAIFHEAD*SGFKIS
Trigger: AGATATTTTGAAGCCTGACAAATCAGCTTCATGGAA...TATAGCACAGAATCCTACGAAGATAGGACTGTGAACATTTGTTTTCTTTTTCGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS-3UTR CAA 90 bp ATCTCCCCAAAATCATCTAAGAGACATATTTACACAAGTTCTGACCATGCTAAATTCCATGAAGCTGATTaGTCAGGCTTCAAAATATCT +
Preference number: 5 (lower is better)
Translates to: ISPKSSKRHIYTSSDHAKFHEAD*SGFKIS
Trigger: AGATATTTTGAAGCCTGACAAATCAGCTTCATGGAA...TTTAGCATGGTCAGAACTTGTGTAAATATGTCTCTTAGATGATTTTGGGGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 72 bp CCGGAGCTCCGAGCTGCCGGGCCTCTGCCGTCCTCTTaGGAGCGCTCACTGAAGGGCACTGGCCGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: PELRAAGPLPSS*ERSLKGTGRAP
Trigger: GGGGGCCCGGCCAGTGCCCTTCAGTGAGCGCTCGCAAGAGGACGGCAGAGGCCCGGCAGCTCGGAGCTCCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS CAA 90 bp CCACAAGGTCCCGGAGCTCCGAGCTGCCGGGCCTCTGCCGTCCTCTaGCGAGCGCTCACTGAAGGGCACTGGCCGGGCCCCCTCGCGGCG +
Preference number: 6 (lower is better)
Translates to: PQGPGAPSCRASAVL*RALTEGHWPGPLAA
Trigger: CGCCGCGAGGGGGCCCGGCCAGTGCCCTTCAGTGAGCGCTCGCAAGAGGACGGCAGAGGCCCGGCAGCTCGGAGCTCCGGGACCTTGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS TCA 72 bp GCGGCTCTGGGTCCCGGCAGAGGGACAGCCGCGTCCTaGTGCGCCACAAGGTCCCGGAGCTCCGAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: AALGPGRGTAAS*CATRSRSSELP
Trigger: CGGCAGCTCGGAGCTCCGGGACCTTGTGGCGCATCAGGACGCGGCTGTCCCTCTGCCGGGACCCAGAGCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 72 bp GCGGGGCCACTGGGTTGGGACGGCTCGGCCGGCCCCTaGCCGGGCTGTTGTTGCTGCTGCTGCTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: AGPLGWDGSAGP*PGCCCCCCCCC
Trigger: ACAGCAGCAGCAGCAGCAGCAACAACAGCCCGGGCAGGGGCCGGCCGAGCCGTCCCAACCCAGTGGCCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 72 bp CGTCCTGATGCGCCACAAGGTCCCGGAGCTCCGAGCTaGCGGGCCTCTGCCGTCCTCTTGCGAGCGCTCACT +
Preference number: 6 (lower is better)
Translates to: RPDAPQGPGAPS*RASAVLLRALT
Trigger: AGTGAGCGCTCGCAAGAGGACGGCAGAGGCCCGGCAGCTCGGAGCTCCGGGACCTTGTGGCGCATCAGGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 72 bp GTGCTGCGGAGAAGCCGGTGCCCGTGCGGCTGCGAGTaGGGCTGTGGGTGTGGGTGCGGTATTTGGTGCGGA +
Preference number: 6 (lower is better)
Translates to: VLRRSRCPCGCE*GCGCGCGIWCG
Trigger: TCCGCACCAAATACCGCACCCACACCCACAGCCGCACTCGCAGCCGCACGGGCACCGGCTTCTCCGCAGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 72 bp GCCGGCCCCTGCCCGGGCTGTTGTTGCTGCTGCTGCTaGTGCTGTTGCTGCTGCTGCTGCTGGTGTTGCAGC +
Preference number: 6 (lower is better)
Translates to: AGPCPGCCCCCC*CCCCCCCWCCS
Trigger: GCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAGCCCGGGCAGGGGCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS CCA 72 bp TCTGCCGTCCTCTTGCGAGCGCTCACTGAAGGGCACTaGCCGGGCCCCCTCGCGGCGCTTTTGAATGGGCCA +
Preference number: 6 (lower is better)
Translates to: SAVLLRALTEGH*PGPLAALLNGP
Trigger: TGGCCCATTCAAAAGCGCCGCGAGGGGGCCCGGCCAGTGCCCTTCAGTGAGCGCTCGCAAGAGGACGGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000266671.10
ENST00000619060.1
CDS CAA 90 bp GGCCGGCCCCTGCCCGGGCTGTTGTTGCTGCTGCTGCTGCTGCTGTaGCTGCTGCTGCTGCTGGTGTTGCAGCTGCTTGGGCGGGATAAG +
Preference number: 6 (lower is better)
Translates to: GRPLPGLLLLLLLLL*LLLLLVLQLLGRDK
Trigger: CTTATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAGCCCGGGCAGGGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 72 bp GGCCCCTGCCCGGGCTGTTGTTGCTGCTGCTGCTGCTaGTGTTGCTGCTGCTGCTGCTGGTGTTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: GPCPGCCCCCCC*CCCCCCWCCSC
Trigger: GCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAACAGCCCGGGCAGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS CCA 72 bp TTGTCTTGCCCGGGAGCTGCCCCTTTCAGGCAGAGTTaGAGGTGCTGCGGAGAAGCCGGTGCCCGTGCGGCT +
Preference number: 6 (lower is better)
Translates to: LSCPGAAPFRQS*RCCGEAGARAA
Trigger: AGCCGCACGGGCACCGGCTTCTCCGCAGCACCTCCAACTCTGCCTGAAAGGGGCAGCTCCCGGGCAAGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 72 bp TGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGGTGTTaGAGCTGCTTGGGCGGGATAAGCAGCAGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCWC*SCLGGISSSPS
Trigger: GGAAGGGCTGCTGCTTATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS CCA 72 bp TGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTaGTGTTGCAGCTGCTTGGGCGGGATAAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCSCLGGISSS
Trigger: GCTGCTGCTTATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS CAA 72 bp TGCTGTTGCTGCTGCTGCTGCTGGTGTTGCAGCTGCTaGGGCGGGATAAGCAGCAGCCCTTCCTCGGTGAGG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCWCCSC*GGISSSPSSVR
Trigger: CCTCACCGAGGAAGGGCTGCTGCTTATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS CAA 90 bp TGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGGTGTTGCAGCTGCTaGGGCGGGATAAGCAGCAGCCCTTCCTCGGTGAGGATGCAACAC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCWCCSC*GGISSSPSSVRMQH
Trigger: GTGTTGCATCCTCACCGAGGAAGGGCTGCTGCTTATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS CAA 90 bp TTGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGGTGTaGCAGCTGCTTGGGCGGGATAAGCAGCAGCCCTTCCTCGGTGAG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLV*QLLGRDKQQPFLGE
Trigger: CTCACCGAGGAAGGGCTGCTGCTTATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS TCA 72 bp TGGCCTGACGATTCTTGTACTGCACCATCTGCAGCGTaGTCTCGGCGTTCCAGCCCTGGTCTTGCGGGCACC +
Preference number: 6 (lower is better)
Translates to: WPDDSCTAPSAA*SRRSSPGLAGT
Trigger: GGTGCCCGCAAGACCAGGGCTGGAACGCCGAGATCACGCTGCAGATGGTGCAGTACAAGAATCGTCAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 72 bp TGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTaGTGGTGTTGCAGCTGCTTGGGCGGGATAAGCAGC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*WCCSCLGGISS
Trigger: GCTGCTTATCCCGCCCAAGCAGCTGCAACACCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS CAA 72 bp CAGTCCACGGTCTTCATGTTGGAGAAGTGCAGTTCCTaGAGCTTGACCGGCGGCTCGAGGCTGGCGACAGCG +
Preference number: 6 (lower is better)
Translates to: QSTVFMLEKCSS*SLTGGSRLATA
Trigger: CGCTGTCGCCAGCCTCGAGCCGCCGGTCAAGCTCAAGGAACTGCACTTCTCCAACATGAAGACCGTGGACTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 72 bp CGCTCCACACAGTCCACGGTCTTCATGTTGGAGAAGTaGAGTTCCTTGAGCTTGACCGGCGGCTCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: RSTQSTVFMLEK*SSLSLTGGSRL
Trigger: CAGCCTCGAGCCGCCGGTCAAGCTCAAGGAACTGCACTTCTCCAACATGAAGACCGTGGACTGTGTGGAGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS GCA 72 bp TCCTCAAGTCCTCAAAACCTTGTCTTGCCCGGGAGCTaGCCCTTTCAGGCAGAGTTGGAGGTGCTGCGGAGA +
Preference number: 6 (lower is better)
Translates to: SSSPQNLVLPGS*PFQAELEVLRR
Trigger: TCTCCGCAGCACCTCCAACTCTGCCTGAAAGGGGCAGCTCCCGGGCAAGACAAGGTTTTGAGGACTTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS CAA 72 bp TTGCCCTTGCGCTCCACACAGTCCACGGTCTTCATGTaGGAGAAGTGCAGTTCCTTGAGCTTGACCGGCGGC +
Preference number: 6 (lower is better)
Translates to: LPLRSTQSTVFM*EKCSSLSLTGG
Trigger: GCCGCCGGTCAAGCTCAAGGAACTGCACTTCTCCAACATGAAGACCGTGGACTGTGTGGAGCGCAAGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS CAA 90 bp TACATGTACTTGCCCTTGCGCTCCACACAGTCCACGGTCTTCATGTaGGAGAAGTGCAGTTCCTTGAGCTTGACCGGCGGCTCGAGGCTG +
Preference number: 6 (lower is better)
Translates to: YMYLPLRSTQSTVFM*EKCSSLSLTGGSRL
Trigger: CAGCCTCGAGCCGCCGGTCAAGCTCAAGGAACTGCACTTCTCCAACATGAAGACCGTGGACTGTGTGGAGCGCAAGGGCAAGTACATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS TCA 72 bp TGCTTCTGCCGCGTGGATTTGACCGCCAGGATGGCCTaGCGATTCTTGTACTGCACCATCTGCAGCGTGATC +
Preference number: 6 (lower is better)
Translates to: CFCRVDLTARMA*RFLYCTICSVI
Trigger: GATCACGCTGCAGATGGTGCAGTACAAGAATCGTCAGGCCATCCTGGCGGTCAAATCCACGCGGCAGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1
CDS CAA 72 bp TCTGCCATCACCACAGTGAAGTACATGTACTTGCCCTaGCGCTCCACACAGTCCACGGTCTTCATGTTGGAG +
Preference number: 6 (lower is better)
Translates to: SAITTVKYMYLP*RSTQSTVFMLE
Trigger: CTCCAACATGAAGACCGTGGACTGTGTGGAGCGCAAGGGCAAGTACATGTACTTCACTGTGGTGATGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266671.10
ENST00000602540.5
ENST00000619060.1