RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHKB (Homo sapiens)

Ensembl gene IDs: ENSG00000102893

Ensembl transcript IDs: ENST00000299167.12, ENST00000323584.10, ENST00000563376.5, ENST00000564711.2, ENST00000564873.1, ENST00000565424.2, ENST00000566037.6, ENST00000566044.5, ENST00000566275.2, ENST00000566319.2, ENST00000566436.1, ENST00000566721.1, ENST00000567200.1, ENST00000567402.5, ENST00000568171.1, ENST00000568439.1, ENST00000570047.2

Found 529 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCAGAAACAGCATTCCCAAGCCTTTATTACTGTGGTGGAAGAGTaGTGTGGGCGTAGGTCTGAAGGGATTTTAGGGTGTTTGCCACAG +
Preference number: 1 (lower is better)
Translates to: GQKQHSQAFITVVEE*CGRRSEGILGCLPQ
Trigger: CTGTGGCAAACACCCTAAAATCCCTTCAGACCTACGCCCACAGCACTCTTCCACCACAGTAATAAAGGCTTGGGAATGCTGTTTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
3UTR TCA 90 bp GATTCTCTGGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTaGGCATCGAGATCCACAAATATAACTGACCACGAACAGCCCTGG +
Preference number: 1 (lower is better)
Translates to: DSLGNSEHKVCLLRL*ASRSTNITDHEQPW
Trigger: CCAGGGCTGTTCGTGGTCAGTTATATTTGTGGATCTCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
3UTR TCA 90 bp ACTCTCAGCATCCTAAGGCACCGGTGCAACTGTGTTCCTATGATGTaGTATTCAGCCAGGCTGTTCAAGAACAAGCTATTTCTCCTGTTA +
Preference number: 1 (lower is better)
Translates to: TLSILRHRCNCVPMM*YSARLFKNKLFLLL
Trigger: TAACAGGAGAAATAGCTTGTTCTTGAACAGCCTGGCTGAATATCACATCATAGGAACACAGTTGCACCGGTGCCTTAGGATGCTGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568439.1
3UTR-3UTR CCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCACCCCGCCAAGGATGTaGCATTCACCTCCCCAGCAT +
Preference number: 2 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTTPPRM*HSPPQH
Trigger: ATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGT...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
3UTR-3UTR CCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATACCCCGCCAAGGATGTaGCATTCACCTCCCCAGCAT +
Preference number: 2 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINTPPRM*HSPPQH
Trigger: ATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGT...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
3UTR-3UTR TCA 90 bp GTGGAAGAGTGCTGTGGGCGTAGGTCTGAAGGGATTTTAGGGTGTTTGCCACAGCAGGTGACGGAGAGGTaGCATCATGTTAGATGGCAA +
Preference number: 2 (lower is better)
Translates to: VEECCGRRSEGILGCLPQQVTER*HHVRWQ
Trigger: TTGCCATCTAACATGATGTCACCTCTCCGTCACCTG...CTGTGGCAAACACCCTAAAATCCCTTCAGACCTACGCCCACAGCACTCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
3UTR-3UTR GCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGAGATTGGCTATGACATaGAAGAGGTCCATAACCCCG +
Preference number: 2 (lower is better)
Translates to: TITVRLAMTCKRSITPPRRLAMT*KRSITP
Trigger: CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCT...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
3UTR-3UTR GCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTTCACCTCCCCAGCATaGTCAGTTCGTATATTAATG +
Preference number: 2 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTFTSPA*SVRILM
Trigger: CATTAATATACGAACTGAGCATGCTGGGGAGGTGAA...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
3UTR-3UTR GCA 90 bp AGATCCACAAATATAACTGACCACGAACAGCCCTGGTTGCCAAAAAGGTTGAATGGAGGAGGCAGAAGCTaGATCTCTTTTTGTTCAGCA +
Preference number: 2 (lower is better)
Translates to: RSTNITDHEQPWLPKRLNGGGRS*ISFCSA
Trigger: TGCTGAACAAAAAGAGATGCAGCTTCTGCCTCCTCC...ATTCAACCTTTTTGGCAACCAGGGCTGTTCGTGGTCAGTTATATTTGTGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570047.2
3UTR CAA 90 bp GCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGGCTGCCTaGATTAAGCTTGAACATGAAACACAACACACTTCAGAACATGTG +
Preference number: 2 (lower is better)
Translates to: AFTSPACSVRILMAA*IKLEHETQHTSEHV
Trigger: CACATGTTCTGAAGTGTGTTGTGTTTCATGTTCAAGCTTAATCAAGGCAGCCATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
3UTR-3UTR TCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCCTAAGATTTCAGGTGTaGGCTACTGTGCTGAGCCTA +
Preference number: 2 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFLRFQV*ATVLSL
Trigger: TAGGCTCAGCACAGTAGCTCACACCTGAAATCTTAG...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
3UTR-3UTR TCA 90 bp CTGTGTTCCTATGATGTGATATTCAGCCAGGCTGTTCAAGAACAAGCTATTTCTATTGGTTCTGTCACTTaGCAACTGTGGGACCTTGGA +
Preference number: 2 (lower is better)
Translates to: LCSYDVIFSQAVQEQAISIGSVT*QLWDLG
Trigger: TCCAAGGTCCCACAGTTGTCAAGTGACAGAACCAAT...AGAAATAGCTTGTTCTTGAACAGCCTGGCTGAATATCACATCATAGGAACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568439.1
3UTR-3UTR GCA 90 bp TTTAATTTTTCAGATCACTTTCACAGAACTCTCAGCATCCTAAGGCACCGGTGCATCACTGCTTCCAAATaGTTGACATTCCCTCCTTCC +
Preference number: 2 (lower is better)
Translates to: FNFSDHFHRTLSILRHRCITASK*LTFPPS
Trigger: GGAAGGAGGGAATGTCAAGCATTTGGAAGCAGTGAT...GCACCGGTGCCTTAGGATGCTGAGAGTTCTGTGAAAGTGATCTGAAAAATTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568439.1
3UTR-3UTR GCA 90 bp AGAGGTGACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGAGTTTCCATATGAGATaGTTTGGGATCATTCCACTG +
Preference number: 2 (lower is better)
Translates to: RGDIMLDGKRSSQWDSEMSFHMR*FGIIPL
Trigger: CAGTGGAATGATCCCAAAGCATCTCATATGGAAACT...CATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTCACCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
3UTR-3UTR TCA 90 bp AGAGAAACAATAGCAAAAAGCCAAGTAAGAATGAGTCTGATGTGCTTATTGTACGCCCCACAGACAGGATaGCAGTTATCTGAAGTTGTC +
Preference number: 2 (lower is better)
Translates to: RETIAKSQVRMSLMCLLYAPQTG*QLSEVV
Trigger: GACAACTTCAGATAACTGTCATCCTGTCTGTGGGGC...GTACAATAAGCACATCAGACTCATTCTTACTTGGCTTTTTGCTATTGTTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566275.2
3UTR-3UTR GCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCTTCACCTCCCCAGCATaGTCAGTTCGTATATTAATG +
Preference number: 2 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFFTSPA*SVRILM
Trigger: CATTAATATACGAACTGAGCATGCTGGGGAGGTGAA...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
3UTR-3UTR CCA 90 bp TCCTATGATGTGATATTCAGCCAGGCTGTTCAAGAACAAGCTATTTCTCCTGTTTTAACGCCTTCATATTaGTTCTGTCACTTGACAACT +
Preference number: 2 (lower is better)
Translates to: SYDVIFSQAVQEQAISPVLTPSY*FCHLTT
Trigger: AGTTGTCAAGTGACAGAACCAATATGAAGGCGTTAA...AACAGGAGAAATAGCTTGTTCTTGAACAGCCTGGCTGAATATCACATCATAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568439.1
3UTR GCA 72 bp CCCAGGCTGGTGTGCAGTGGCAGGATTTCAGCTCACTaGAACCTCCGTCTCCTGGTTCAAGCAATTCTCATG +
Preference number: 3 (lower is better)
Translates to: PRLVCSGRISAH*NLRLLVQAILM
Trigger: CATGAGAATTGCTTGAACCAGGAGACGGAGGTTGCAGTGAGCTGAAATCCTGCCACTGCACACCAGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
3UTR CCA 72 bp ATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTaGCATTCACCTCCCCAGCATGCTCAGTTCGTATAT +
Preference number: 3 (lower is better)
Translates to: MTCKRSITPPRM*HSPPQHAQFVY
Trigger: ATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
3UTR TCA 72 bp ACAGGTGTCGTGAGTGTCTACCAGGTGACGGAGAGGTaGCATCATGTTAGATGGCAAGAGATCATCCCAATG +
Preference number: 3 (lower is better)
Translates to: TGVVSVYQVTER*HHVRWQEIIPM
Trigger: CATTGGGATGATCTCTTGCCATCTAACATGATGTCACCTCTCCGTCACCTGGTAGACACTCACGACACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
3UTR GCA 72 bp CCAGCAGCAGATTCATCACCGCCTTTGTCAAATAGCTaGATGTTCCTCTTTTTCCCAGGGGAGGAGTGTTGT +
Preference number: 3 (lower is better)
Translates to: PAADSSPPLSNS*MFLFFPGEECC
Trigger: ACAACACTCCTCCCCTGGGAAAAAGAGGAACATGCAGCTATTTGACAAAGGCGGTGATGAATCTGCTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564711.2
3UTR GCA 72 bp CAGCATTCCCAAGCCTTTATTACTGTGGTGGAAGAGTaGTGTGGGCGTAGGTCTGAAGGGATTTTAGGGTGT +
Preference number: 3 (lower is better)
Translates to: QHSQAFITVVEE*CGRRSEGILGC
Trigger: ACACCCTAAAATCCCTTCAGACCTACGCCCACAGCACTCTTCCACCACAGTAATAAAGGCTTGGGAATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
3UTR CCA 72 bp GGCAGAAACAGCATTCCCAAGCCTTTATTACTGTGGTaGAAGAGTGCTGTGGGCGTAGGTCTGAAGGGATTT +
Preference number: 3 (lower is better)
Translates to: GRNSIPKPLLLW*KSAVGVGLKGF
Trigger: AAATCCCTTCAGACCTACGCCCACAGCACTCTTCCACCACAGTAATAAAGGCTTGGGAATGCTGTTTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
3UTR-3UTR CAA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCACCATTACCGTTAGATaGGCTATGACATGCAAGAGG +
Preference number: 3 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTTITVR*AMTCKR
Trigger: CCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
3UTR-3UTR CAA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATACCATTACCGTTAGATaGGCTATGACATGCAAGAGG +
Preference number: 3 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINTITVR*AMTCKR
Trigger: CCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
3UTR-3UTR CAA 90 bp CAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAGATCCACAAATATCACGAACAGCCCTGGTaGCCAAAAAGGTTGAATCCA +
Preference number: 3 (lower is better)
Translates to: QRAQSLPVAIVSIEIHKYHEQPW*PKRLNP
Trigger: TGGATTCAACCTTTTTGGCAACCAGGGCTGTTCGTG...ATATTTGTGGATCTCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570047.2
3UTR-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGGATTCATCACCGCCTTaGTCAAATAGCTGCATGTTC +
Preference number: 3 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMDSSPP*SNSCMF
Trigger: GAACATGCAGCTATTTGACAAAGGCGGTGATGAATC...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564711.2
3UTR TCA 72 bp GTTGCGATTGTGAGCATCGAGATCCACAAATATAACTaGCCACGAACAGCCCTGGTTGCCAAAAAGGTTGAA +
Preference number: 3 (lower is better)
Translates to: VAIVSIEIHKYN*PRTALVAKKVE
Trigger: TTCAACCTTTTTGGCAACCAGGGCTGTTCGTGGTCAGTTATATTTGTGGATCTCGATGCTCACAATCGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570047.2
3UTR TCA 72 bp GGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTaGGCATCGAGATCCACAAATATAACTGACCACGAA +
Preference number: 3 (lower is better)
Translates to: GNSEHKVCLLRL*ASRSTNITDHE
Trigger: TTCGTGGTCAGTTATATTTGTGGATCTCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
3UTR GCA 72 bp AAAGCATTTACCATTACCGTTAGATTGGCTATGACATaGAAGAGGTCCATAACCCCGCCAAGGATGTGGCAT +
Preference number: 3 (lower is better)
Translates to: KAFTITVRLAMT*KRSITPPRMWH
Trigger: ATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
3UTR TCA 72 bp ATCCTAAGGCACCGGTGCAACTGTGTTCCTATGATGTaGTATTCAGCCAGGCTGTTCAAGAACAAGCTATTT +
Preference number: 3 (lower is better)
Translates to: ILRHRCNCVPMM*YSARLFKNKLF
Trigger: AAATAGCTTGTTCTTGAACAGCCTGGCTGAATATCACATCATAGGAACACAGTTGCACCGGTGCCTTAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568439.1
3UTR-3UTR CAA 90 bp ATTCTCTGGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGATGGTTGCCAAAAAGGTaGAATCCATTAATTGCTTCT +
Preference number: 3 (lower is better)
Translates to: ILWVTASTKFACCDCEHRWLPKR*NPLIAS
Trigger: AGAAGCAATTAATGGATTCAACCTTTTTGGCAACCA...TCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570047.2
3UTR CCA 72 bp GGTGACATCATGTTAGATGGCAAGAGATCATCCCAATaGGATTCTGAGATGGAGTTTCCATATGAGATGCTT +
Preference number: 3 (lower is better)
Translates to: GDIMLDGKRSSQ*DSEMEFPYEML
Trigger: AAGCATCTCATATGGAAACTCCATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
3UTR-3UTR CAA 90 bp TGGGGCATCTTTGTGTTTAATTTTTCAGATCACTTTCACAGAACTCTCAGCATCTATTGGTTCTGTCACTaGACAACTGTGGGACCTTGG +
Preference number: 3 (lower is better)
Translates to: WGIFVFNFSDHFHRTLSIYWFCH*TTVGPW
Trigger: CCAAGGTCCCACAGTTGTCAAGTGACAGAACCAATA...GATGCTGAGAGTTCTGTGAAAGTGATCTGAAAAATTAAACACAAAGATGCCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568439.1
3UTR-3UTR CAA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCAAAACACTCGGGAGTTaGAAGCTCAATCTTGTGAAC +
Preference number: 3 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFKTLGS*KLNLVN
Trigger: GTTCACAAGATTGAGCTTCAAACTCCCGAGTGTTTT...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
3UTR-3UTR CAA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGAGACACGGGTCATCATaGTTTGGCTTGACTTCTCCT +
Preference number: 3 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLRHGSS*FGLTSP
Trigger: AGGAGAAGTCAAGCCAAACAATGATGACCCGTGTCT...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564711.2
3UTR TCA 72 bp ATCTCAAAGCATGAAGTCAATACGTGTCACAGATTCTaGATGCTTTCAGGAGTAGCACAGGAAAACTTCAGA +
Preference number: 3 (lower is better)
Translates to: ISKHEVNTCHRF*MLSGVAQENFR
Trigger: TCTGAAGTTTTCCTGTGCTACTCCTGAAAGCATTCAGAATCTGTGACACGTATTGACTTCATGCTTTGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
3UTR-3UTR CAA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGACCATTACCGTTAGATaGGCTATGACATGCAAGAGG +
Preference number: 3 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLTITVR*AMTCKR
Trigger: CCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCAGCTCACTTCTGCCGTaGGTCCCGCCGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTSSLLP*VPPPPP
Trigger: TGGCGGGGGCGGCGGGACTCACGGCAGAAGTGAGCT...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATAGCTCACTTCTGCCGTaGGTCCCGCCGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINSSLLP*VPPPPP
Trigger: TGGCGGGGGCGGCGGGACTCACGGCAGAAGTGAGCT...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTACTTCCAGCTCACTTCTaGCGTGAGTCCCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVLPAHF*RESRRP
Trigger: GGGGCGGCGGGACTCACGGCAGAAGTGAGCTGGAAG...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGAGCTCACTTCTGCCGTaGGTCCCGCCGCCCCCGCCA +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMSSLLP*VPPPPP
Trigger: TGGCGGGGGCGGCGGGACTCACGGCAGAAGTGAGCT...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGCTTCCCAGCAACAATaGTCCCATTGGGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFASQQQ*SHWACA
Trigger: AGCGCACGCCCAATGGGATCATTGTTGCTGGGAAGC...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAGGCTGTCCTGGATCTTaGCCTTCTGGTCACCACCGC +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVGCPGS*PSGHHR
Trigger: GCGGTGGTGACCAGAAGGCCAAGATCCAGGACAGCC...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp GTGGAAGAGTGCTGTGGGCGTAGGTCTGAAGGGATTTTAGGGTGTTTGCCACAGGGACTCAACCATGGCTaGAAGGGCCCCCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: VEECCGRRSEGILGCLPQGLNHG*KGPLLQ
Trigger: TTGGAGGAGGGGGCCCTTTCAGCCATGGTTGAGTCC...CTGTGGCAAACACCCTAAAATCCCTTCAGACCTACGCCCACAGCACTCTTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAACCCCGCCAAGGATGTaGCATTCACCTCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVTPPRM*HSPPQH
Trigger: ATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGT...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR CCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCACCCCGCCAAGGATGTaGCATTCACCTCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPTPPRM*HSPPQH
Trigger: ATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGT...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR TCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTACAAATGCAGGATAACTaGTGCAGGGGAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVQMQDN*CRGAGQ
Trigger: CTGCCCTGCTCCCCTGCATCAGTTATCCTGCATTTG...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCTCACTAGGTGACAGCTaGTACAAGTCCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFSLGDS*YKSKAG
Trigger: GCCAGCCTTGGACTTGTATCAGCTGTCACCTAGTGA...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGCTTCCAGCTCACTTCTaGCGTGAGTCCCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMLPAHF*RESRRP
Trigger: GGGGCGGCGGGACTCACGGCAGAAGTGAGCTGGAAG...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGTCCCGAGGCAGCCAATaGGCCTGTCTGGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRSRGSQ*ACLAFQ
Trigger: CTGGAAGGCCAGACAGGCCCATTGGCTGCCTCGGGA...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCCCAGCAGGATGGCTTaGCTAGCCAGACAACTGCAA +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPPSRMA*LARQLQ
Trigger: TTGCAGTTGTCTGGCTAGCCAAGCCATCCTGCTGGG...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATCACTAGGTGACAGCTaGTACAAGTCCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVSLGDS*YKSKAG
Trigger: GCCAGCCTTGGACTTGTATCAGCTGTCACCTAGTGA...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCTTCCAGCTCACTTCTaGCGTGAGTCCCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: AFTITVRLAMTCKRSITPLPAHF*RESRRP
Trigger: GGGGCGGCGGGACTCACGGCAGAAGTGAGCTGGAAG...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp CTGCTTTTGCTAAACCAACCGAGCCTGCTGATTCTCAACTCAACAGAGGCTGGAGGCTGTCCTGGATCTTaGCCTTCTGGTCACCACCGC +
Preference number: 4 (lower is better)
Translates to: LLLLNQPSLLILNSTEAGGCPGS*PSGHHR
Trigger: GCGGTGGTGACCAGAAGGCCAAGATCCAGGACAGCC...TCCAGCCTCTGTTGAGTTGAGAATCAGCAGGCTCGGTTGGTTTAGCAAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCCAGTGGGCCCTGATTaGAAAACCTCATGCTCACGT +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPPVGPD*KTSCSR
Trigger: ACGTGAGCATGAGGTTTTCCAATCAGGGCCCACTGG...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTCCCGAGGCAGCCAATaGGCCTGTCTGGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMSRGSQ*ACLAFQ
Trigger: CTGGAAGGCCAGACAGGCCCATTGGCTGCCTCGGGA...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCCAAATGCAGGATAACTaGTGCAGGGGAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTQMQDN*CRGAGQ
Trigger: CTGCCCTGCTCCCCTGCATCAGTTATCCTGCATTTG...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCCCAGGAGTTTTGCGATaGTATAAAGTGCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFPGVLR*YKVLVP
Trigger: GGGGACAAGCACTTTATATCATCGCAAAACTCCTGG...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCACTCCATGGCATGGATaGTCCACCCGATTCGTATTT +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFTPWHG*STRFVF
Trigger: AAATACGAATCGGGTGGATCATCCATGCCATGGAGT...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAATCAATTCGCCTGTATaGAAGAGCCAAAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVINSPV*KSQSPG
Trigger: GCCTGGGCTTTGGCTCTTGCATACAGGCGAATTGAT...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp GTGGAAGAGTGCTGTGGGCGTAGGTCTGAAGGGATTTTAGGGTGTTTGCCACAGACTGTGGTGGAAGAGTaGTGTGGGCGTAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: VEECCGRRSEGILGCLPQTVVEE*CGRRSE
Trigger: TTCAGACCTACGCCCACAGCACTCTTCCACCACAGT...CTGTGGCAAACACCCTAAAATCCCTTCAGACCTACGCCCACAGCACTCTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCTGGATCTTGGCCTTCTaGTCACCACCGCATGTTTTA +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFWILAF*SPPHVL
Trigger: TAAAACATGCGGTGGTGACCAGAAGGCCAAGATCCA...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGTCCCGAGGCAGCCAATaGGCCTGTCTGGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: AFTITVRLAMTCKRSITPSRGSQ*ACLAFQ
Trigger: CTGGAAGGCCAGACAGGCCCATTGGCTGCCTCGGGA...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGGTCATAGAACCCGGTaGGAGTTCTATTCAAAGACC +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFGHRTR*EFYSKT
Trigger: GGTCTTTGAATAGAACTCCCACCGGGTTCTATGACC...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGACCCCGCCAAGGATGTaGCATTCACCTCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRTPPRM*HSPPQH
Trigger: ATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGT...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR CCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCTTAAAACTGAGCGCTTaGTCCGAGCTCTTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPLKLSA*SELFAP
Trigger: TGGAGCGAAGAGCTCGGACCAAGCGCTCAGTTTTAA...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566044.5
CDS-3UTR TCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTACATGCATTTTATAGCTaGGTGCTCCAGCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVHAFYS*VLQLMG
Trigger: ACCCATGAGCTGGAGCACTCAGCTATAAAATGCATG...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCTGCCTGTTGCGATTGTaGGCATCGAGATCCACAAAT +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPCLLRL*ASRSTN
Trigger: ATTTGTGGATCTCGATGCTCACAATCGCAACAGGCA...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATTGGGGCCTTCTCTTTTaGGCAGTATACCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINWGLLF*AVYPAG
Trigger: TCCTGCTGGGTATACTGCTCAAAAGAGAAGGCCCCA...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTGGGGCCTTCTCTTTTaGGCAGTATACCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTWGLLF*AVYPAG
Trigger: TCCTGCTGGGTATACTGCTCAAAAGAGAAGGCCCCA...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAACTCCATGGCATGGATaGTCCACCCGATTCGTATTT +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVTPWHG*STRFVF
Trigger: AAATACGAATCGGGTGGATCATCCATGCCATGGAGT...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGTCTCCGCCACGGATCTaGAGTTCATACTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMSPPRI*SSYSMA
Trigger: TGCCATGGAGTATGAACTTCAGATCCGTGGCGGAGA...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAATACATGGTCATATCTaGCAGGGTTGGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVIHGHI*QGWLLR
Trigger: CCTCAGCAACCAACCCTGTCAGATATGACCATGTAT...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCATTCCCAAGCCTTTATTACTGTGGTGGAAGAGTGCTGTGGGCGGTGAACTTCTCTTGTaGGAGCACACGGCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: GRNSIPKPLLLWWKSAVGGELLL*EHTAFA
Trigger: TGCAAAGGCCGTGTGCTCTCACAAGAGAAGTTCACC...GCCCACAGCACTCTTCCACCACAGTAATAAAGGCTTGGGAATGCTGTTTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCACATGTTGTTGGGCGTaGATCCTGCTTAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPTCCWA*ILLKLL
Trigger: CAGCAGTTTAAGCAGGATCCACGCCCAACAACATGT...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAACATGTTGTTGGGCGTaGATCCTGCTTAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVTCCWA*ILLKLL
Trigger: CAGCAGTTTAAGCAGGATCCACGCCCAACAACATGT...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTGATCTTGATTCTCTaGGTAACAGCGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFVILIL*VTASTK
Trigger: CTTTGTGCTCGCTGTTACCCAGAGAATCAAGATCAC...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCCAAGTCATTTTCCAGTaGGCCCTGATTGGAAAACCT +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFQVIFQ*ALIGKP
Trigger: AGGTTTTCCAATCAGGGCCCACTGGAAAATGACTTG...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGAGGCCATATCTGAATaGGTTCTACTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFEAISE*VLLVEE
Trigger: CTCCTCAACAAGTAGAACCCATTCAGATATGGCCTC...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCTCATACTCCATGGCATaGATGATCCACCCGATTCGT +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPSYSMA*MIHPIR
Trigger: ACGAATCGGGTGGATCATCCATGCCATGGAGTATGA...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCATACAAGTCCAAGGCTaGCTTGTCTCCGCCACGGAT +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTIQVQG*LVSATD
Trigger: ATCCGTGGCGGAGACAAGCCAGCCTTGGACTTGTAT...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCCTCCTGTATGCACATTaGAAACAGAGTGAAGACATG +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFLLYAH*KQSEDM
Trigger: CATGTCTTCACTCTGTTTTCAATGTGCATACAGGAG...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCATCCACAAATATAACTaGCCACGAACAGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPIHKYN*PRTALV
Trigger: AACCAGGGCTGTTCGTGGTCAGTTATATTTGTGGAT...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGCAAATGCAGGATAACTaGTGCAGGGGAGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMQMQDN*CRGAGQ
Trigger: CTGCCCTGCTCCCCTGCATCAGTTATCCTGCATTTG...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAAATGCGATAAATCTTTaGTGTCCCGAGGCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVNAINL*CPEAAN
Trigger: ATTGGCTGCCTCGGGACATCAAAGATTTATCGCATT...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp GGCAGAAACAGCATTCCCAAGCCTTTATTACTGTGGTGGAAGAGTGCTGTGGGCCCAGTTCTTGCTGAATaGCCGCTTCCCTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: GRNSIPKPLLLWWKSAVGPVLAE*PLPSHH
Trigger: ATGATGAGAGGGAAGCGGTCATTCAGCAAGAACTGG...GCCCACAGCACTCTTCCACCACAGTAATAAAGGCTTGGGAATGCTGTTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR TCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGTCTCCGCCACGGATCTaGAGTTCATACTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRSPPRI*SSYSMA
Trigger: TGCCATGGAGTATGAACTTCAGATCCGTGGCGGAGA...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATAAAGACCCATCGATCTaGCGCCTGTTCAGCCAACAT +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINKDPSI*RLFSQH
Trigger: ATGTTGGCTGAACAGGCGTCAGATCGATGGGTCTTT...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGGACGACTGCATCAGGTaGGCAGGCCATTTCAAATTG +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMDDCIR*AGHFKL
Trigger: CAATTTGAAATGGCCTGCTCACCTGATGCAGTCGTC...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566044.5
CDS-3UTR TCA 90 bp CTCTGGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAGATACCAACCGAGCCTGCTaGTTCTCAACTCAACAGAGG +
Preference number: 4 (lower is better)
Translates to: LWVTASTKFACCDCEHRDTNRAC*FSTQQR
Trigger: CCTCTGTTGAGTTGAGAATCAGCAGGCTCGGTTGGT...ATCTCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR GCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGTTGGGCGTGGATCCTaGTTAAACTGCTGGACCTTA +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINVGRGS*LNCWTL
Trigger: TAAGGTCCAGCAGTTTAAGCAGGATCCACGCCCAAC...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCACAAAGTTTGCCTGTTaGGATTGTGAGCATCGAGAT +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFTKFAC*DCEHRD
Trigger: ATCTCGATGCTCACAATCGCAACAGGCAAACTTTGT...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCTTCACCTCCCCAGCATaGTCAGTTCGTATATTAATG +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFFTSPA*SVRILM
Trigger: CATTAATATACGAACTGAGCATGCTGGGGAGGTGAA...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR GCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGAAATTTCTGGGTAAATaGAGCCCCGTAGCGCACCGC +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRKFLGK*SPVAHR
Trigger: GCGGTGCGCTACGGGGCTGCATTTACCCAGAAATTT...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323584.10
CDS-3UTR CCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGCAGTATAGGCTGTCCTaGATCTTGGCCTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMQYRLS*ILAFWS
Trigger: TGACCAGAAGGCCAAGATCCAGGACAGCCTATACTG...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATCAGTATAGGCTGTCCTaGATCTTGGCCTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINQYRLS*ILAFWS
Trigger: TGACCAGAAGGCCAAGATCCAGGACAGCCTATACTG...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGCCAGTGGGCCCTGATTaGAAAACCTCATGCTCACGT +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRPVGPD*KTSCSR
Trigger: ACGTGAGCATGAGGTTTTCCAATCAGGGCCCACTGG...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGATCTGTCTGTACTGTaGCTGGTCAATATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFDLSVL*LVNISQ
Trigger: TTGGGAAATATTGACCAGCCACAGTACAGACAGATC...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp AGAGGTGACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGCAGGGGACTCAACCATaGCTGAAAGGGCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGDIMLDGKRSSQWDSEMQGTQP*LKGPPP
Trigger: AGGAGGGGGCCCTTTCAGCCATGGTTGAGTCCCCTG...CATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTCACCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CCA 90 bp GTGGAAGAGTGCTGTGGGCGTAGGTCTGAAGGGATTTTAGGGTGTTTGCCACAGCCTTTATTACTGTGGTaGAAGAGTGCTGTGGGCGTA +
Preference number: 4 (lower is better)
Translates to: VEECCGRRSEGILGCLPQPLLLW*KSAVGV
Trigger: TACGCCCACAGCACTCTTCCACCACAGTAATAAAGG...CTGTGGCAAACACCCTAAAATCCCTTCAGACCTACGCCCACAGCACTCTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR TCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAACATTGAAAACAGAGTaGAGACATGTTGTTGGGCGT +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVTLKTE*RHVVGR
Trigger: ACGCCCAACAACATGTCTTCACTCTGTTTTCAATGT...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCTCCTGTATGCACATTaGAAACAGAGTGAAGACATG +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPLLYAH*KQSEDM
Trigger: CATGTCTTCACTCTGTTTTCAATGTGCATACAGGAG...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCGATAATCTGGAGTCCTaGGGAAATCATTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPDNLES*GNHFHK
Trigger: CTTGTGGAAATGATTTCCTCAGGACTCCAGATTATC...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCCCAGGAGTTTTGCGATaGTATAAAGTGCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTPGVLR*YKVLVP
Trigger: GGGGACAAGCACTTTATATCATCGCAAAACTCCTGG...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATCCAGGAGTTTTGCGATaGTATAAAGTGCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINPGVLR*YKVLVP
Trigger: GGGGACAAGCACTTTATATCATCGCAAAACTCCTGG...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGTTTTCCAGTGGGCCCTaGTTGGAAAACCTCATGCTC +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRFSSGP*LENLML
Trigger: GAGCATGAGGTTTTCCAATCAGGGCCCACTGGAAAA...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCCAATCATTCAGTTTTTaGAGAATTTCGTGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFQSFSF*RISWVG
Trigger: ACCCACCCACGAAATTCTTCAAAAACTGAATGATTG...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGGGCCTTCTCTTTTaGGCAGTATACCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMWGLLF*AVYPAG
Trigger: TCCTGCTGGGTATACTGCTCAAAAGAGAAGGCCCCA...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATTTTCAGCATGCCACTaGATAACTCAGGGTTATTGG +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVFSACH*ITQGYW
Trigger: CCAATAACCCTGAGTTATTCAGTGGCATGCTGAAAA...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATCATCTTCCATTCTGTTaGGGCTGCAGAATATCCAGC +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINHLPFC*GCRISS
Trigger: GCTGGATATTCTGCAGCCTCAACAGAATGGAAGATG...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGCATCTTCCATTCTGTTaGGGCTGCAGAATATCCAGC +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMHLPFC*GCRISS
Trigger: GCTGGATATTCTGCAGCCTCAACAGAATGGAAGATG...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATATACATGGTCATATCTaGCAGGGTTGGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINIHGHI*QGWLLR
Trigger: CCTCAGCAACCAACCCTGTCAGATATGACCATGTAT...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACTGTGGTGGAAGAGTGCTGTGGGCGTAGGTCTGAAGGGATTTTAGGGTGTCAGGTGACGGAGAGGTaGCATCATGTTAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: ITVVEECCGRRSEGILGCQVTER*HHVRWQ
Trigger: TTGCCATCTAACATGATGTCACCTCTCCGTCACCTG...ACACCCTAAAATCCCTTCAGACCTACGCCCACAGCACTCTTCCACCACAGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR GCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATCAATTCGCCTGTATaGAAGAGCCAAAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRINSPV*KSQSPG
Trigger: GCCTGGGCTTTGGCTCTTGCATACAGGCGAATTGAT...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATATCATCCAGGGCAAATaGAGGATAACTGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINIIQGK*RITDAG
Trigger: CCCTGCATCAGTTATCCTGCATTTGCCCTGGATGAT...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCATCATCCAGGGCAAATaGAGGATAACTGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTIIQGK*RITDAG
Trigger: CCCTGCATCAGTTATCCTGCATTTGCCCTGGATGAT...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCTGCGATGATATAAAGTaGTTGTCCCCAAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFCDDIK*LSPKKQ
Trigger: CTGTTTCTTTGGGGACAAGCACTTTATATCATCGCA...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCGCTTTCTGCTATAAGTaGCACATGAACTACCAAGTC +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPAFCYK*HMNYQV
Trigger: GACTTGGTAGTTCATGTGGCACTTATAGCAGAAAGC...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAATAACTTCTTCTTCATaGCCAAAGGCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVITSSS*PKAPRV
Trigger: AACTCTGGGTGCCTTTGGGCATGAAGAAGAAGTTAT...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATAGATTGGCTATGACATaGAAGAGGTCCATAACCCCG +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINRLAMT*KRSITP
Trigger: CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCT...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR GCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGAGATTGGCTATGACATaGAAGAGGTCCATAACCCCG +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMRLAMT*KRSITP
Trigger: CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCT...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR CCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATTGGATCTTGGCCTTCTaGTCACCACCGCATGTTTTA +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINWILAF*SPPHVL
Trigger: TAAAACATGCGGTGGTGACCAGAAGGCCAAGATCCA...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGACATGTTGTTGGGCGTaGATCCTGCTTAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMTCCWA*ILLKLL
Trigger: CAGCAGTTTAAGCAGGATCCACGCCCAACAACATGT...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGGACCACGAACAGCCCTaGTTGCCAAAAAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMDHEQP*LPKRLN
Trigger: ATTCAACCTTTTTGGCAACCAGGGCTGTTCGTGGTC...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCTGTAGTAGCATCTGTTaGGATCTTCCAATGATGTTC +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFCSSIC*DLPMMF
Trigger: GAACATCATTGGAAGATCCCAACAGATGCTACTACA...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCCAGCAGGATGGCTTaGCTAGCCAGACAACTGCAA +
Preference number: 4 (lower is better)
Translates to: AFTITVRLAMTCKRSITPPSRMA*LARQLQ
Trigger: TTGCAGTTGTCTGGCTAGCCAAGCCATCCTGCTGGG...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATAACATTAGTAATGGATaGGGCCAGGCTGTCCACTAC +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINNISNG*GQAVHY
Trigger: GTAGTGGACAGCCTGGCCCCATCCATTACTAATGTT...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000566044.5
CDS-3UTR CCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGGTCATAGAACCCGGTaGGAGTTCTATTCAAAGACC +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINGHRTR*EFYSKT
Trigger: GGTCTTTGAATAGAACTCCCACCGGGTTCTATGACC...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGGCAACCTCCGTCTCCTaGTTCAAGCAATTCTCATGC +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRATSVS*FKQFSC
Trigger: GCATGAGAATTGCTTGAACCAGGAGACGGAGGTTGC...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCAAAAACAACTCTCTTTaGGGCAAGGGCTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPKNNSL*GKGSNS
Trigger: TGAGTTTGAGCCCTTGCCCCAAAGAGAGTTGTTTTT...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR TCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCATCCACAAATATAACTaGCCACGAACAGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTIHKYN*PRTALV
Trigger: AACCAGGGCTGTTCGTGGTCAGTTATATTTGTGGAT...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTTTTCCAGTGGGCCCTaGTTGGAAAACCTCATGCTC +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMFSSGP*LENLML
Trigger: GAGCATGAGGTTTTCCAATCAGGGCCCACTGGAAAA...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAGTGTTCAGAAAAACTTaGAGTCTTTGGCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVVFRKT*SLWLSA
Trigger: AGCAGAAAGCCAAAGACTTCAAGTTTTTCTGAACAC...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCGATCCACATGAACTTTaGCTCCTCCAATTATTCCTT +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPDPHEL*LLQLFL
Trigger: AAGGAATAATTGGAGGAGTCAAAGTTCATGTGGATC...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTGCTGCTTTGCCGTTTaGCTTTTGAATGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTCCFAV*LLNVWE
Trigger: CTCCCAAACATTCAAAAGTCAAACGGCAAAGCAGCA...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAATCATTCAGTTTTTaGAGAATTTCGTGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPQSFSF*RISWVG
Trigger: ACCCACCCACGAAATTCTTCAAAAACTGAATGATTG...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGCCAGTTCTTGCTGAATaGCCGCTTCCCTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMPVLAE*PLPSHH
Trigger: ATGATGAGAGGGAAGCGGTCATTCAGCAAGAACTGG...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp GTGGAAGAGTGCTGTGGGCGTAGGTCTGAAGGGATTTTAGGGTGTTTGCCACAGTTTTCAGCATGCCACTaGATAACTCAGGGTTATTGG +
Preference number: 4 (lower is better)
Translates to: VEECCGRRSEGILGCLPQFSACH*ITQGYW
Trigger: CCAATAACCCTGAGTTATTCAGTGGCATGCTGAAAA...CTGTGGCAAACACCCTAAAATCCCTTCAGACCTACGCCCACAGCACTCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR GCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATCATTTTATAGCTGAGTaGTCCAGCTCATGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINHFIAE*SSSWVL
Trigger: AAGGACCCATGAGCTGGAGCACTCAGCTATAAAATG...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCTGCGATGATATAAAGTaGTTGTCCCCAAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPCDDIK*LSPKKQ
Trigger: CTGTTTCTTTGGGGACAAGCACTTTATATCATCGCA...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGCTAGGGGTGCTGCTTTaGCGTTTGACTTTTGAATGT +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMLGVLL*RLTFEC
Trigger: ACATTCAAAAGTCAAACGGCAAAGCAGCACCCCTAG...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCCTTTGTCAAATAGCTaGATGTTCCTCTTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPPLSNS*MFLFFP
Trigger: TGGGAAAAAGAGGAACATGCAGCTATTTGACAAAGG...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR GCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGTTCAAGCAATTCTCATaGCTCAGCCTCCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRFKQFS*LSLLSS
Trigger: GCTACTGAGGAGGCTGAGGCATGAGAATTGCTTGAA...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR GCA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGCAGATTTTTCCATGTaGTCACACATCCATTCATTT +
Preference number: 4 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFADFSM*SHIHSF
Trigger: AAATGAATGGATGTGTGAGCACATGGAAAAATCTGC...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCCTGAGCCTGAGCGCTTaGTCCGAGCTCTTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFLSLSA*SELFAP
Trigger: TGGAGCGAAGAGCTCGGACCAAGCGCTCAGGCTCAG...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGCAGTATAGGCTGTCCTaGATCTTGGCCTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMQYRLS*ILAFWS
Trigger: TGACCAGAAGGCCAAGATCCAGGACAGCCTATACTG...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GCTTCTAGAGCTGCTTTTGCTAAACCAACCGAGCCTGCTGATTCTCAACTCAACCAGTATAGGCTGTCCTaGATCTTGGCCTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ASRAAFAKPTEPADSQLNQYRLS*ILAFWS
Trigger: TGACCAGAAGGCCAAGATCCAGGACAGCCTATACTG...GTTGAGTTGAGAATCAGCAGGCTCGGTTGGTTTAGCAAAAGCAGCTCTAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CCA 90 bp CTCTGGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAGATACATGTTGTTGGGCGTaGATCCTGCTTAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: LWVTASTKFACCDCEHRDTCCWA*ILLKLL
Trigger: CAGCAGTTTAAGCAGGATCCACGCCCAACAACATGT...ATCTCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCGTGAAGACATGTTGTTaGGCGTGGATCCTGCTTAAA +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTVKTCC*AWILLK
Trigger: TTTAAGCAGGATCCACGCCCAACAACATGTCTTCAC...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGGACCACGAACAGCCCTaGTTGCCAAAAAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRDHEQP*LPKRLN
Trigger: ATTCAACCTTTTTGGCAACCAGGGCTGTTCGTGGTC...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp CTGCTTTTGCTAAACCAACCGAGCCTGCTGATTCTCAACTCAACAGAGGCTGGAGACCACGAACAGCCCTaGTTGCCAAAAAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: LLLLNQPSLLILNSTEAGDHEQP*LPKRLN
Trigger: ATTCAACCTTTTTGGCAACCAGGGCTGTTCGTGGTC...TCCAGCCTCTGTTGAGTTGAGAATCAGCAGGCTCGGTTGGTTTAGCAAAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCTGTAGTAGCATCTGTTaGGATCTTCCAATGATGTTC +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPCSSIC*DLPMMF
Trigger: GAACATCATTGGAAGATCCCAACAGATGCTACTACA...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGGAGGCCATATCTGAATaGGTTCTACTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMEAISE*VLLVEE
Trigger: CTCCTCAACAAGTAGAACCCATTCAGATATGGCCTC...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGGAAGAATTTCGTGGGTaGGTTTGTCCTTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMEEFRG*VCPSIH
Trigger: GTGAATGGAAGGACAAACCCACCCACGAAATTCTTC...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp AGAGGTGACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGCCCAGCAGGATGGCTTaGCTAGCCAGACAACTGCAA +
Preference number: 4 (lower is better)
Translates to: RGDIMLDGKRSSQWDSEMPSRMA*LARQLQ
Trigger: TTGCAGTTGTCTGGCTAGCCAAGCCATCCTGCTGGG...CATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTCACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
3UTR CAA 72 bp CACAAGCCCCACAGACAGGATGACAGTTATCTGAAGTaGTCTGATATCCCTAGGGCAGAAACAGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: HKPHRQDDSYLK*SDIPRAETAFP
Trigger: TGGGAATGCTGTTTCTGCCCTAGGGATATCAGACAACTTCAGATAACTGTCATCCTGTCTGTGGGGCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR TCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGACATTGAAAACAGAGTaGAGACATGTTGTTGGGCGT +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMTLKTE*RHVVGR
Trigger: ACGCCCAACAACATGTCTTCACTCTGTTTTCAATGT...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGATAATCTGGAGTCCTaGGGAAATCATTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINDNLES*GNHFHK
Trigger: CTTGTGGAAATGATTTCCTCAGGACTCCAGATTATC...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGCCTGTTGCGATTGTaGGCATCGAGATCCACAAAT +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMCLLRL*ASRSTN
Trigger: ATTTGTGGATCTCGATGCTCACAATCGCAACAGGCA...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGTTGGGATCTTCCAATaGTGTTCTATACCCATCTCT +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINVGIFQ*CSIPIS
Trigger: AGAGATGGGTATAGAACATCATTGGAAGATCCCAAC...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGCTATAAGTGCCACATaGACTACCAAGTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINAISAT*TTKSFS
Trigger: GGAAAATGACTTGGTAGTTCATGTGGCACTTATAGC...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCGCTATAAGTGCCACATaGACTACCAAGTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTAISAT*TTKSFS
Trigger: GGAAAATGACTTGGTAGTTCATGTGGCACTTATAGC...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTGTAGACGATCCACATaGACTTTGACTCCTCCAATT +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTCRRST*TLTPPI
Trigger: AATTGGAGGAGTCAAAGTTCATGTGGATCGTCTACA...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAGTTCTTGCTGAATaGCCGCTTCCCTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: AFTITVRLAMTCKRSITPPVLAE*PLPSHH
Trigger: ATGATGAGAGGGAAGCGGTCATTCAGCAAGAACTGG...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGCATCTTCCATTCTGTTaGGGCTGCAGAATATCCAGC +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMHLPFC*GCRISS
Trigger: GCTGGATATTCTGCAGCCTCAACAGAATGGAAGATG...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGCTAAGATTTCAGGTGTaGGCTACTGTGCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMLRFQV*ATVLSL
Trigger: TAGGCTCAGCACAGTAGCTCACACCTGAAATCTTAG...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR TCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATCATTTGATATCGATTaGCTCAATACTGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVSFDID*LNTEAT
Trigger: AGTGGCTTCAGTATTGAGTCAATCGATATCAAATGA...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR TCA 90 bp GACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGGAGTTTCCCCCTCCTCCAAGGTaGACTTCTCTTGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: DIMLDGKRSSQWDSEMEFPPPPR*TSLVRA
Trigger: TGCTCTCACAAGAGAAGTTCACCTTGGAGGAGGGGG...AAACTCCATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR TCA 90 bp AAGGCACCGGTGCAACTGTGTTCCTATGATGTGATATTCAGCCAGGCTGTTCAAGCAACTGTGTTCCTATaGTGTGATATTCAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: KAPVQLCSYDVIFSQAVQATVFL*CDIQPG
Trigger: GCCTGGCTGAATATCACATCATAGGAACACAGTTGC...TTGAACAGCCTGGCTGAATATCACATCATAGGAACACAGTTGCACCGGTGCCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR GCA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGGTTGGGCGTGGATCCTaGTTAAACTGCTGGACCTTA +
Preference number: 4 (lower is better)
Translates to: AFTITVRLAMTCKRSITPVGRGS*LNCWTL
Trigger: TAAGGTCCAGCAGTTTAAGCAGGATCCACGCCCAAC...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp CAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAGATCCACAAATATGTTGGGCGTGGATCCTaGTTAAACTGCTGGACCTTA +
Preference number: 4 (lower is better)
Translates to: QRAQSLPVAIVSIEIHKYVGRGS*LNCWTL
Trigger: TAAGGTCCAGCAGTTTAAGCAGGATCCACGCCCAAC...ATATTTGTGGATCTCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR GCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATCGAATGTAGCTCTGTaGTGCCATTATTATATTTGC +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVSNVAL*CHYYIC
Trigger: GCAAATATAATAATGGCAGCACAGAGCTACATTCGA...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGATTGGAAAACCTCATaGTCACGTTACGTTGATCCT +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINDWKTS*SRYVDP
Trigger: AGGATCAACGTAACGTGAGCATGAGGTTTTCCAATC...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGCTTTCTGCTATAAGTaGCACATGAACTACCAAGTC +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINAFCYK*HMNYQV
Trigger: GACTTGGTAGTTCATGTGGCACTTATAGCAGAAAGC...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAGTTACCTGTTTGCCCTaGACTAAAACATTAGTAATG +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVVTCLP*TKTLVM
Trigger: CATTACTAATGTTTTAGTGCAGGGCAAACAGGTAAC...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000566044.5
CDS-3UTR GCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATATAACTTCTTCTTCATaGCCAAAGGCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINITSSS*PKAPRV
Trigger: AACTCTGGGTGCCTTTGGGCATGAAGAAGAAGTTAT...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGAGATTGGCTATGACATaGAAGAGGTCCATAACCCCG +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMRLAMT*KRSITP
Trigger: CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCT...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR CCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGAAAGAGACCGGTAGTTaGACTTTGATACAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMKETGS*TLIQQQ
Trigger: TTGCTGCTGTATCAAAGTCCAACTACCGGTCTCTTT...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGCAGGATATCCTTCTGTaGTATGATGAAGTACTGGAG +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMQDILL*YDEVLE
Trigger: CTCCAGTACTTCATCATACCACAGAAGGATATCCTG...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGAACATTAGTAATGGATaGGGCCAGGCTGTCCACTAC +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMNISNG*GQAVHY
Trigger: GTAGTGGACAGCCTGGCCCCATCCATTACTAATGTT...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000566044.5
CDS-3UTR TCA 90 bp CTTCTAGAGCTGCTTTTGCTAAACCAACCGAGCCTGCTGATTCTCAACTCAACACATGCATTTTATAGCTaGGTGCTCCAGCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: LLELLLLNQPSLLILNSTHAFYS*VLQLMG
Trigger: ACCCATGAGCTGGAGCACTCAGCTATAAAATGCATG...TGTTGAGTTGAGAATCAGCAGGCTCGGTTGGTTTAGCAAAAGCAGCTCTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR TCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGGATAATCTGGAGTCCTaGGGAAATCATTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRDNLES*GNHFHK
Trigger: CTTGTGGAAATGATTTCCTCAGGACTCCAGATTATC...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTCTCTGGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAATCCACAAATATAACTaGCCACGAACAGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ILWVTASTKFACCDCEHRIHKYN*PRTALV
Trigger: AACCAGGGCTGTTCGTGGTCAGTTATATTTGTGGAT...TCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR TCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGTGTTCAGAAAAACTTaGAGTCTTTGGCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINVFRKT*SLWLSA
Trigger: AGCAGAAAGCCAAAGACTTCAAGTTTTTCTGAACAC...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGGTCCTAACTTTTCATTaGTACCCAGCTGCAAATAAG +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMVLTFH*YPAANK
Trigger: CTTATTTGCAGCTGGGTATCAATGAAAAGTTAGGAC...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGAATGCGATAAATCTTTaGTGTCCCGAGGCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMNAINL*CPEAAN
Trigger: ATTGGCTGCCTCGGGACATCAAAGATTTATCGCATT...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGTGTAGACGATCCACATaGACTTTGACTCCTCCAATT +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRCRRST*TLTPPI
Trigger: AATTGGAGGAGTCAAAGTTCATGTGGATCGTCTACA...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp GACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGGAGTTTTGGGGCCTTCTCTTTTaGGCAGTATACCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: DIMLDGKRSSQWDSEMEFWGLLF*AVYPAG
Trigger: TCCTGCTGGGTATACTGCTCAAAAGAGAAGGCCCCA...AAACTCCATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR TCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGCGATTGACTCAATACTaGAGCCACTCATCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRRLTQY*SHSSFL
Trigger: AAGAAAGGATGAGTGGCTTCAGTATTGAGTCAATCG...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR TCA 90 bp TCTCAGCATCCTAAGGCACCGGTGCAACTGTGTTCCTATGATGTGATATTCAGCTGTGTTCCTATGATGTaGTATTCAGCCAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SQHPKAPVQLCSYDVIFSCVPMM*YSARLF
Trigger: GAACAGCCTGGCTGAATATCACATCATAGGAACACA...GCTGAATATCACATCATAGGAACACAGTTGCACCGGTGCCTTAGGATGCTGAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR GCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGACAAAGTTTGCCTGTTaGGATTGTGAGCATCGAGAT +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRTKFAC*DCEHRD
Trigger: ATCTCGATGCTCACAATCGCAACAGGCAAACTTTGT...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGATCAGCCAGGAGTTTTaGGATGATATAAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMISQEF*DDIKCL
Trigger: CAAGCACTTTATATCATCGCAAAACTCCTGGCTGAT...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGGCTTTCTGCTATAAGTaGCACATGAACTACCAAGTC +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRAFCYK*HMNYQV
Trigger: GACTTGGTAGTTCATGTGGCACTTATAGCAGAAAGC...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATCCATACAATTTCTTATaGAAGATCTCGGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINPYNFL*KISALY
Trigger: GTACAGTGCCGAGATCTTGCATAAGAAATTGTATGG...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR GCA 90 bp CAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAGATCCACAAATATGGAGGAGGCAGAAGCTaGATCTCTTTTTGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: QRAQSLPVAIVSIEIHKYGGGRS*ISFCSA
Trigger: TGCTGAACAAAAAGAGATGCAGCTTCTGCCTCCTCC...ATATTTGTGGATCTCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CCA 90 bp CTCTGGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAGATAAAGAGACCGGTAGTTaGACTTTGATACAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LWVTASTKFACCDCEHRDKETGS*TLIQQQ
Trigger: TTGCTGCTGTATCAAAGTCCAACTACCGGTCTCTTT...ATCTCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CCA 90 bp CAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAGATCCACAAATATTGGATCTTGGCCTTCTaGTCACCACCGCATGTTTTA +
Preference number: 4 (lower is better)
Translates to: QRAQSLPVAIVSIEIHKYWILAF*SPPHVL
Trigger: TAAAACATGCGGTGGTGACCAGAAGGCCAAGATCCA...ATATTTGTGGATCTCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGGTGAAGACATGTTGTTaGGCGTGGATCCTGCTTAAA +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMVKTCC*AWILLK
Trigger: TTTAAGCAGGATCCACGCCCAACAACATGTCTTCAC...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GCTTCTAGAGCTGCTTTTGCTAAACCAACCGAGCCTGCTGATTCTCAACTCAACGTGAAGACATGTTGTTaGGCGTGGATCCTGCTTAAA +
Preference number: 4 (lower is better)
Translates to: ASRAAFAKPTEPADSQLNVKTCC*AWILLK
Trigger: TTTAAGCAGGATCCACGCCCAACAACATGTCTTCAC...GTTGAGTTGAGAATCAGCAGGCTCGGTTGGTTTAGCAAAAGCAGCTCTAGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGTGTAGTAGCATCTGTTaGGATCTTCCAATGATGTTC +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMCSSIC*DLPMMF
Trigger: GAACATCATTGGAAGATCCCAACAGATGCTACTACA...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCAAAACTCTTAAATTCTaGAAGCTCTTCTGTGTCACT +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPKTLKF*KLFCVT
Trigger: AGTGACACAGAAGAGCTTCCAGAATTTAAGAGTTTT...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGGAAGAATTTCGTGGGTaGGTTTGTCCTTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMEEFRG*VCPSIH
Trigger: GTGAATGGAAGGACAAACCCACCCACGAAATTCTTC...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCGTTTTGAATCACTCTTaGAGACAAAGGATTAGAGAT +
Preference number: 4 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPVLNHS*RQRIRD
Trigger: ATCTCTAATCCTTTGTCTCCAAGAGTGATTCAAAAC...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGAAAAACAACTCTCTTTaGGGCAAGGGCTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRKNNSL*GKGSNS
Trigger: TGAGTTTGAGCCCTTGCCCCAAAGAGAGTTGTTTTT...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAAAAAGTAGTAATGTGTaGGGCTATAGAGGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVKSSNV*GYRGRK
Trigger: TTTTCTTCCTCTATAGCCCCACACATTACTACTTTT...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323584.10
CDS-3UTR CCA 90 bp GACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGGAGTTTTTGGGATCATTCCACTaGGCCTACAGGGGACTCAAC +
Preference number: 4 (lower is better)
Translates to: DIMLDGKRSSQWDSEMEFLGSFH*AYRGLN
Trigger: GTTGAGTCCCCTGTAGGCCCAGTGGAATGATCCCAA...AAACTCCATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CCA 90 bp TGGGATTCTGAGATGGAGTTTCCATATGAGATGCTTTGGGATCATTCCACTGGGCCATATGAGATGCTTTaGGATCATTCCACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: WDSEMEFPYEMLWDHSTGPYEML*DHSTGP
Trigger: AGGCCCAGTGGAATGATCCCAAAGCATCTCATATGG...CCCAGTGGAATGATCCCAAAGCATCTCATATGGAAACTCCATCTCAGAATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR TCA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGGCAGCAATGTTGACTTaGCAATTCTGTAATAATGGT +
Preference number: 4 (lower is better)
Translates to: PAKDVAFTSPACSVRILMAAMLT*QFCNNG
Trigger: ACCATTATTACAGAATTGTCAAGTCAACATTGCTGC...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTCTCTGGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAACATTGAAAACAGAGTaGAGACATGTTGTTGGGCGT +
Preference number: 4 (lower is better)
Translates to: ILWVTASTKFACCDCEHRTLKTE*RHVVGR
Trigger: ACGCCCAACAACATGTCTTCACTCTGTTTTCAATGT...TCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR TCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGGTCCTAACTTTTCATTaGTACCCAGCTGCAAATAAG +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRVLTFH*YPAANK
Trigger: CTTATTTGCAGCTGGGTATCAATGAAAAGTTAGGAC...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTTTTCAGCATGCCACTaGATAACTCAGGGTTATTGG +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMFSACH*ITQGYW
Trigger: CCAATAACCCTGAGTTATTCAGTGGCATGCTGAAAA...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp ATTCTCTGGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAACAAAGTTTGCCTGTTaGGATTGTGAGCATCGAGAT +
Preference number: 4 (lower is better)
Translates to: ILWVTASTKFACCDCEHRTKFAC*DCEHRD
Trigger: ATCTCGATGCTCACAATCGCAACAGGCAAACTTTGT...TCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR GCA 90 bp GGCAGAAACAGCATTCCCAAGCCTTTATTACTGTGGTGGAAGAGTGCTGTGGGCGTTACCTGTTTGCCCTaGACTAAAACATTAGTAATG +
Preference number: 4 (lower is better)
Translates to: GRNSIPKPLLLWWKSAVGVTCLP*TKTLVM
Trigger: CATTACTAATGTTTTAGTGCAGGGCAAACAGGTAAC...GCCCACAGCACTCTTCCACCACAGTAATAAAGGCTTGGGAATGCTGTTTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR GCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGCCTTTGTCAAATAGCTaGATGTTCCTCTTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRPLSNS*MFLFFP
Trigger: TGGGAAAAAGAGGAACATGCAGCTATTTGACAAAGG...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR GCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTTCACCTCCCCAGCATaGTCAGTTCGTATATTAATG +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMFTSPA*SVRILM
Trigger: CATTAATATACGAACTGAGCATGCTGGGGAGGTGAA...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR GCA 90 bp GGCAGAAACAGCATTCCCAAGCCTTTATTACTGTGGTGGAAGAGTGCTGTGGGCAGAATGAGTCTGATGTaGTTATTGTACCATAAGGCA +
Preference number: 4 (lower is better)
Translates to: GRNSIPKPLLLWWKSAVGRMSLM*LLYHKA
Trigger: TGCCTTATGGTACAATAAGCACATCAGACTCATTCT...GCCCACAGCACTCTTCCACCACAGTAATAAAGGCTTGGGAATGCTGTTTCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGCTGAGCCTGAGCGCTTaGTCCGAGCTCTTCGCTCCA +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLLSLSA*SELFAP
Trigger: TGGAGCGAAGAGCTCGGACCAAGCGCTCAGGCTCAG...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGGGCTGTCCTGGATCTTaGCCTTCTGGTCACCACCGC +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLGCPGS*PSGHHR
Trigger: GCGGTGGTGACCAGAAGGCCAAGATCCAGGACAGCC...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGGGCTGTCCTGGATCTTaGCCTTCTGGTCACCACCGC +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLGCPGS*PSGHHR
Trigger: GCGGTGGTGACCAGAAGGCCAAGATCCAGGACAGCC...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCAAGTCATTTTCCAGTaGGCCCTGATTGGAAAACCT +
Preference number: 4 (lower is better)
Translates to: AFTITVRLAMTCKRSITPQVIFQ*ALIGKP
Trigger: AGGTTTTCCAATCAGGGCCCACTGGAAAATGACTTG...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGGAAGAATTTCGTGGGTaGGTTTGTCCTTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: AFTITVRLAMTCKRSITPEEFRG*VCPSIH
Trigger: GTGAATGGAAGGACAAACCCACCCACGAAATTCTTC...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp TGGGATTCTGAGATGGAGTTTCCATATGAGATGCTTTGGGATCATTCCACTGGGGAAGAATTTCGTGGGTaGGTTTGTCCTTCCATTCAC +
Preference number: 4 (lower is better)
Translates to: WDSEMEFPYEMLWDHSTGEEFRG*VCPSIH
Trigger: GTGAATGGAAGGACAAACCCACCCACGAAATTCTTC...CCCAGTGGAATGATCCCAAAGCATCTCATATGGAAACTCCATCTCAGAATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGGATCTGTCTGTACTGTaGCTGGTCAATATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMDLSVL*LVNISQ
Trigger: TTGGGAAATATTGACCAGCCACAGTACAGACAGATC...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGTCAATTCCCTCTCCATaGACTTCATGCTTACGTTTT +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRSIPSP*TSCLRF
Trigger: AAAACGTAAGCATGAAGTCCATGGAGAGGGAATTGA...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR TCA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCTCCTGTATGCACATTaGAAACAGAGTGAAGACATG +
Preference number: 4 (lower is better)
Translates to: AFTITVRLAMTCKRSITPLLYAH*KQSEDM
Trigger: CATGTCTTCACTCTGTTTTCAATGTGCATACAGGAG...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp AGATCCACAAATATAACTGACCACGAACAGCCCTGGTTGCCAAAAAGGTTGAATTGCCTGTTGCGATTGTaGGCATCGAGATCCACAAAT +
Preference number: 4 (lower is better)
Translates to: RSTNITDHEQPWLPKRLNCLLRL*ASRSTN
Trigger: ATTTGTGGATCTCGATGCTCACAATCGCAACAGGCA...ATTCAACCTTTTTGGCAACCAGGGCTGTTCGTGGTCAGTTATATTTGTGGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR TCA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGTTTTCAGCATGCCACTaGATAACTCAGGGTTATTGG +
Preference number: 4 (lower is better)
Translates to: AFTITVRLAMTCKRSITPFSACH*ITQGYW
Trigger: CCAATAACCCTGAGTTATTCAGTGGCATGCTGAAAA...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACTGTGGTGGAAGAGTGCTGTGGGCGTAGGTCTGAAGGGATTTTAGGGTGTTGTAAAGAAACATACTaGGTATGTATTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ITVVEECCGRRSEGILGCCKETY*VCICCC
Trigger: GCAGCAGCAAATACATACTCAGTATGTTTCTTTACA...ACACCCTAAAATCCCTTCAGACCTACGCCCACAGCACTCTTCCACCACAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR TCA 90 bp TTTAATTTTTCAGATCACTTTCACAGAACTCTCAGCATCCTAAGGCACCGGTGCCTCACGTTGTCTACCTaGTTGGAAAACCTCATGCTC +
Preference number: 4 (lower is better)
Translates to: FNFSDHFHRTLSILRHRCLTLST*LENLML
Trigger: GAGCATGAGGTTTTCCAATCAGGTAGACAACGTGAG...GCACCGGTGCCTTAGGATGCTGAGAGTTCTGTGAAAGTGATCTGAAAAATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR GCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCGTTGGGCGTGGATCCTaGTTAAACTGCTGGACCTTA +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFVGRGS*LNCWTL
Trigger: TAAGGTCCAGCAGTTTAAGCAGGATCCACGCCCAAC...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR GCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCAATGTAGCTCTGTGCTaGCATTATTATATTTGCTTC +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTNVALC*HYYICF
Trigger: GAAGCAAATATAATAATGGCAGCACAGAGCTACATT...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp TCTCAGCATCCTAAGGCACCGGTGCAACTGTGTTCCTATGATGTGATATTCAGCATCAGCCAGGAGTTTTaGGATGATATAAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SQHPKAPVQLCSYDVIFSISQEF*DDIKCL
Trigger: CAAGCACTTTATATCATCGCAAAACTCCTGGCTGAT...GCTGAATATCACATCATAGGAACACAGTTGCACCGGTGCCTTAGGATGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR CCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCCACATAATAGTACTTTaGTACAACAGGATATCCTTC +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTHIIVL*YNRISF
Trigger: GAAGGATATCCTGTTGTACCAAAGTACTATTATGTG...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATACCCAGCAGGATGGCTTaGCTAGCCAGACAACTGCAA +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIPSRMA*LARQLQ
Trigger: TTGCAGTTGTCTGGCTAGCCAAGCCATCCTGCTGGG...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCGTTTTGAATCACTCTTaGAGACAAAGGATTAGAGAT +
Preference number: 4 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTVLNHS*RQRIRD
Trigger: ATCTCTAATCCTTTGTCTCCAAGAGTGATTCAAAAC...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GGCAGAAACAGCATTCCCAAGCCTTTATTACTGTGGTGGAAGAGTGCTGTGGGCGTTTTGAATCACTCTTaGAGACAAAGGATTAGAGAT +
Preference number: 4 (lower is better)
Translates to: GRNSIPKPLLLWWKSAVGVLNHS*RQRIRD
Trigger: ATCTCTAATCCTTTGTCTCCAAGAGTGATTCAAAAC...GCCCACAGCACTCTTCCACCACAGTAATAAAGGCTTGGGAATGCTGTTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CCA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGAATTCATCTCATACATaGTCATATCTGACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: TITVRLAMTCKRSITPPRNSSHT*SYLTGL
Trigger: CAACCCTGTCAGATATGACCATGTATGAGATGAATT...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCGCAACCTCCGTCTCCTaGTTCAAGCAATTCTCATGC +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFATSVS*FKQFSC
Trigger: GCATGAGAATTGCTTGAACCAGGAGACGGAGGTTGC...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR TCA 90 bp ACTGACCACGAACAGCCCTGGTTGCCAAAAAGGTTGAATCCATTAATTGCTTCTCTCCTGTATGCACATTaGAAACAGAGTGAAGACATG +
Preference number: 4 (lower is better)
Translates to: TDHEQPWLPKRLNPLIASLLYAH*KQSEDM
Trigger: CATGTCTTCACTCTGTTTTCAATGTGCATACAGGAG...AGAAGCAATTAATGGATTCAACCTTTTTGGCAACCAGGGCTGTTCGTGGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR TCA 90 bp TTCATTCTTCAGTTAACGCCTTCATATTGGTTCTGTCACTTGACAACTGTGGGACCAGGAGTTTTGCGATaGTATAAAGTGCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: FILQLTPSYWFCHLTTVGPGVLR*YKVLVP
Trigger: GGGGACAAGCACTTTATATCATCGCAAAACTCCTGG...TCCCACAGTTGTCAAGTGACAGAACCAATATGAAGGCGTTAACTGAAGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR TCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCACTCCATGGCATGGATaGTCCACCCGATTCGTATTT +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFTPWHG*STRFVF
Trigger: AAATACGAATCGGGTGGATCATCCATGCCATGGAGT...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATATCACTAGGTGACAGCTaGTACAAGTCCAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSISLGDS*YKSKAG
Trigger: GCCAGCCTTGGACTTGTATCAGCTGTCACCTAGTGA...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGATCTATCTTCTCAGGTaGAACTCCAGTAAGATTGAT +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMIYLLR*NSSKID
Trigger: ATCAATCTTACTGGAGTTTCACCTGAGAAGATAGAT...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR TCA 90 bp TGGGATTCTGAGATGGAGTTTCCATATGAGATGCTTTGGGATCATTCCACTGGGAGGATGACAGTTATCTaGAGTTGTCTGATATCCCTA +
Preference number: 4 (lower is better)
Translates to: WDSEMEFPYEMLWDHSTGRMTVI*SCLISL
Trigger: TAGGGATATCAGACAACTTCAGATAACTGTCATCCT...CCCAGTGGAATGATCCCAAAGCATCTCATATGGAAACTCCATCTCAGAATCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR GCA 90 bp AGATCCACAAATATAACTGACCACGAACAGCCCTGGTTGCCAAAAAGGTTGAATCATTTTATAGCTGAGTaGTCCAGCTCATGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RSTNITDHEQPWLPKRLNHFIAE*SSSWVL
Trigger: AAGGACCCATGAGCTGGAGCACTCAGCTATAAAATG...ATTCAACCTTTTTGGCAACCAGGGCTGTTCGTGGTCAGTTATATTTGTGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR GCA 90 bp CTCTGGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAGATAATGTAGCTCTGTGCTaGCATTATTATATTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LWVTASTKFACCDCEHRDNVALC*HYYICF
Trigger: GAAGCAAATATAATAATGGCAGCACAGAGCTACATT...ATCTCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR GCA 90 bp ATTCTCTGGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGATCGAATGTAGCTCTGTaGTGCCATTATTATATTTGC +
Preference number: 4 (lower is better)
Translates to: ILWVTASTKFACCDCEHRSNVAL*CHYYIC
Trigger: GCAAATATAATAATGGCAGCACAGAGCTACATTCGA...TCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR GCA 90 bp CAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAGATCCACAAATATCTTTTGTCTACCAAGTaGAGGAAATCCTCGAATGTA +
Preference number: 4 (lower is better)
Translates to: QRAQSLPVAIVSIEIHKYLLSTK*RKSSNV
Trigger: TACATTCGAGGATTTCCTGCACTTGGTAGACAAAAG...ATATTTGTGGATCTCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCGACCACGAACAGCCCTaGTTGCCAAAAAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFDHEQP*LPKRLN
Trigger: ATTCAACCTTTTTGGCAACCAGGGCTGTTCGTGGTC...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGGGTATGATGAAGTACTaGAGTCAAAAGATCCTGATA +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMGMMKY*SQKILI
Trigger: TATCAGGATCTTTTGACTCCAGTACTTCATCATACC...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCTCATACTCCATGGCATaGATGATCCACCCGATTCGT +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFSYSMA*MIHPIR
Trigger: ACGAATCGGGTGGATCATCCATGCCATGGAGTATGA...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAATACAAGTCCAAGGCTaGCTTGTCTCCGCCACGGAT +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIIQVQG*LVSATD
Trigger: ATCCGTGGCGGAGACAAGCCAGCCTTGGACTTGTAT...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCGGTCATAGAACCCGGTaGGAGTTCTATTCAAAGACC +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFGHRTR*EFYSKT
Trigger: GGTCTTTGAATAGAACTCCCACCGGGTTCTATGACC...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp TTTAATTTTTCAGATCACTTTCACAGAACTCTCAGCATCCTAAGGCACCGGTGCCGTTGTCTACCTGATTaGAAAACCTCATGCTCACGT +
Preference number: 4 (lower is better)
Translates to: FNFSDHFHRTLSILRHRCRCLPD*KTSCSR
Trigger: ACGTGAGCATGAGGTTTTCCAATCAGGTAGACAACG...GCACCGGTGCCTTAGGATGCTGAGAGTTCTGTGAAAGTGATCTGAAAAATTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR TCA 90 bp AGATCCACAAATATAACTGACCACGAACAGCCCTGGTTGCCAAAAAGGTTGAATGATAATCTGGAGTCCTaGGGAAATCATTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: RSTNITDHEQPWLPKRLNDNLES*GNHFHK
Trigger: CTTGTGGAAATGATTTCCTCAGGACTCCAGATTATC...ATTCAACCTTTTTGGCAACCAGGGCTGTTCGTGGTCAGTTATATTTGTGGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATATTTTCCAGTGGGCCCTaGTTGGAAAACCTCATGCTC +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIFSSGP*LENLML
Trigger: GAGCATGAGGTTTTCCAATCAGGGCCCACTGGAAAA...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp AGAGGTGACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGCAATCATTCAGTTTTTaGAGAATTTCGTGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RGDIMLDGKRSSQWDSEMQSFSF*RISWVG
Trigger: ACCCACCCACGAAATTCTTCAAAAACTGAATGATTG...CATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTCACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR GCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCCATTTTATAGCTGAGTaGTCCAGCTCATGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFHFIAE*SSSWVL
Trigger: AAGGACCCATGAGCTGGAGCACTCAGCTATAAAATG...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR GCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGAATGTAGCTCTGTGCTaGCATTATTATATTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMNVALC*HYYICF
Trigger: GAAGCAAATATAATAATGGCAGCACAGAGCTACATT...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp GACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGGAGTTTATAACTTCTTCTTCATaGCCAAAGGCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: DIMLDGKRSSQWDSEMEFITSSS*PKAPRV
Trigger: AACTCTGGGTGCCTTTGGGCATGAAGAAGAAGTTAT...AAACTCCATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CCA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGGGTATGATGAAGTACTaGAGTCAAAAGATCCTGATA +
Preference number: 4 (lower is better)
Translates to: AFTITVRLAMTCKRSITPGMMKY*SQKILI
Trigger: TATCAGGATCTTTTGACTCCAGTACTTCATCATACC...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGCACATAATAGTACTTTaGTACAACAGGATATCCTTC +
Preference number: 4 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMHIIVL*YNRISF
Trigger: GAAGGATATCCTGTTGTACCAAAGTACTATTATGTG...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCGAGGCCATATCTGAATaGGTTCTACTTGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFEAISE*VLLVEE
Trigger: CTCCTCAACAAGTAGAACCCATTCAGATATGGCCTC...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGATACAAGTCCAAGGCTaGCTTGTCTCCGCCACGGAT +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLIQVQG*LVSATD
Trigger: ATCCGTGGCGGAGACAAGCCAGCCTTGGACTTGTAT...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATACATGCATTTTATAGCTaGGTGCTCCAGCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIHAFYS*VLQLMG
Trigger: ACCCATGAGCTGGAGCACTCAGCTATAAAATGCATG...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCCAGTTCTTGCTGAATaGCCGCTTCCCTCTCATCAT +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLPVLAE*PLPSHH
Trigger: ATGATGAGAGGGAAGCGGTCATTCAGCAAGAACTGG...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGAAAGACCCATCGATCTaGCGCCTGTTCAGCCAACAT +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLKDPSI*RLFSQH
Trigger: ATGTTGGCTGAACAGGCGTCAGATCGATGGGTCTTT...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGAAAGACCCATCGATCTaGCGCCTGTTCAGCCAACAT +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLKDPSI*RLFSQH
Trigger: ATGTTGGCTGAACAGGCGTCAGATCGATGGGTCTTT...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAATACATGGTCATATCTaGCAGGGTTGGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIIHGHI*QGWLLR
Trigger: CCTCAGCAACCAACCCTGTCAGATATGACCATGTAT...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp AAGCTATTTCTCCTGTTAACTCCTTCACACCATTACAAAAATCACTGCTTCCAAATTGGTTCTGTCACTTaGCAACTGTGGGACCTTGGA +
Preference number: 4 (lower is better)
Translates to: KLFLLLTPSHHYKNHCFQIGSVT*QLWDLG
Trigger: TCCAAGGTCCCACAGTTGTCAAGTGACAGAACCAAT...TTGGAAGCAGTGATTTTTGTAATGGTGTGAAGGAGTTAACAGGAGAAATAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR GCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAATCATCCAGGGCAAATaGAGGATAACTGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIIIQGK*RITDAG
Trigger: CCCTGCATCAGTTATCCTGCATTTGCCCTGGATGAT...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCGATTGGAAAACCTCATaGTCACGTTACGTTGATCCT +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFDWKTS*SRYVDP
Trigger: AGGATCAACGTAACGTGAGCATGAGGTTTTCCAATC...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR GCA 90 bp TCCTATGATGTGATATTCAGCCAGGCTGTTCAAGAACAAGCTATTTCTCCTGTTGATTGGAAAACCTCATaGTCACGTTACGTTGATCCT +
Preference number: 4 (lower is better)
Translates to: SYDVIFSQAVQEQAISPVDWKTS*SRYVDP
Trigger: AGGATCAACGTAACGTGAGCATGAGGTTTTCCAATC...AACAGGAGAAATAGCTTGTTCTTGAACAGCCTGGCTGAATATCACATCATAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR GCA 90 bp AAGCTATTTCTCCTGTTAACTCCTTCACACCATTACAAAAATCACTGCTTCCAAATCCTAAGGCACCGGTaGAACTGTGTTCCTATGATG +
Preference number: 4 (lower is better)
Translates to: KLFLLLTPSHHYKNHCFQILRHR*NCVPMM
Trigger: CATCATAGGAACACAGTTGCACCGGTGCCTTAGGAT...TTGGAAGCAGTGATTTTTGTAATGGTGTGAAGGAGTTAACAGGAGAAATAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR CCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCAAAGAGACCGGTAGTTaGACTTTGATACAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFKETGS*TLIQQQ
Trigger: TTGCTGCTGTATCAAAGTCCAACTACCGGTCTCTTT...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp GACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGGAGTTTAAGAGATCATCCCAATaGGATTCTGAGATGGAGTTT +
Preference number: 4 (lower is better)
Translates to: DIMLDGKRSSQWDSEMEFKRSSQ*DSEMEF
Trigger: AAACTCCATCTCAGAATCCCATTGGGATGATCTCTT...AAACTCCATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR TCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGCATGCATTTTATAGCTaGGTGCTCCAGCTCATGGGT +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLHAFYS*VLQLMG
Trigger: ACCCATGAGCTGGAGCACTCAGCTATAAAATGCATG...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGTGCCTGTTGCGATTGTaGGCATCGAGATCCACAAAT +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLCLLRL*ASRSTN
Trigger: ATTTGTGGATCTCGATGCTCACAATCGCAACAGGCA...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAAATGCGATAAATCTTTaGTGTCCCGAGGCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSINAINL*CPEAAN
Trigger: ATTGGCTGCCTCGGGACATCAAAGATTTATCGCATT...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATATGCTGCTTTGCCGTTTaGCTTTTGAATGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSICCFAV*LLNVWE
Trigger: CTCCCAAACATTCAAAAGTCAAACGGCAAAGCAGCA...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTAAGATTTCAGGTGTaGGCTACTGTGCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLLRFQV*ATVLSL
Trigger: TAGGCTCAGCACAGTAGCTCACACCTGAAATCTTAG...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR GCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCTGCGATGATATAAAGTaGTTGTCCCCAAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFCDDIK*LSPKKQ
Trigger: CTGTTTCTTTGGGGACAAGCACTTTATATCATCGCA...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR GCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCATCAGCCAGGAGTTTTaGGATGATATAAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFISQEF*DDIKCL
Trigger: CAAGCACTTTATATCATCGCAAAACTCCTGGCTGAT...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR GCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCAAGTCTTTGGCTTTCTaGTATAAGTGCCACATGAAC +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFKSLAF*YKCHMN
Trigger: GTTCATGTGGCACTTATAGCAGAAAGCCAAAGACTT...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR GCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATACTAGGGGTGCTGCTTTaGCGTTTGACTTTTGAATGT +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSILGVLL*RLTFEC
Trigger: ACATTCAAAAGTCAAACGGCAAAGCAGCACCCCTAG...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCCCTTTGTCAAATAGCTaGATGTTCCTCTTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFPLSNS*MFLFFP
Trigger: TGGGAAAAAGAGGAACATGCAGCTATTTGACAAAGG...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR GCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGTTCAAGCAATTCTCATaGCTCAGCCTCCTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLFKQFS*LSLLSS
Trigger: GCTACTGAGGAGGCTGAGGCATGAGAATTGCTTGAA...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGTGGATCTTGGCCTTCTaGTCACCACCGCATGTTTTA +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLWILAF*SPPHVL
Trigger: TAAAACATGCGGTGGTGACCAGAAGGCCAAGATCCA...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp AGAGAAACAATAGCAAAAAGCCAAGTAAGAATGAGTCTGATGTGCTTATTGTACAACATTAGTAATGGATaGGGCCAGGCTGTCCACTAC +
Preference number: 4 (lower is better)
Translates to: RETIAKSQVRMSLMCLLYNISNG*GQAVHY
Trigger: GTAGTGGACAGCCTGGCCCCATCCATTACTAATGTT...GTACAATAAGCACATCAGACTCATTCTTACTTGGCTTTTTGCTATTGTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCTCAATTCCCTCTCCATaGACTTCATGCTTACGTTTT +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFSIPSP*TSCLRF
Trigger: AAAACGTAAGCATGAAGTCCATGGAGAGGGAATTGA...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp AGAGAAACAATAGCAAAAAGCCAAGTAAGAATGAGTCTGATGTGCTTATTGTACAAGCCTTTATTACTGTaGTGGAAGAGTGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RETIAKSQVRMSLMCLLYKPLLL*WKSAVG
Trigger: GCCCACAGCACTCTTCCACCACAGTAATAAAGGCTT...GTACAATAAGCACATCAGACTCATTCTTACTTGGCTTTTTGCTATTGTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CCA 90 bp TTTAATTTTTCAGATCACTTTCACAGAACTCTCAGCATCCTAAGGCACCGGTGCTTAACGCCTTCATATTaGTTCTGTCACTTGACAACT +
Preference number: 4 (lower is better)
Translates to: FNFSDHFHRTLSILRHRCLTPSY*FCHLTT
Trigger: AGTTGTCAAGTGACAGAACCAATATGAAGGCGTTAA...GCACCGGTGCCTTAGGATGCTGAGAGTTCTGTGAAAGTGATCTGAAAAATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACATTGAAAACAGAGTaGAGACATGTTGTTGGGCGT +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSITLKTE*RHVVGR
Trigger: ACGCCCAACAACATGTCTTCACTCTGTTTTCAATGT...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGATCCACAAATATAACTaGCCACGAACAGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLIHKYN*PRTALV
Trigger: AACCAGGGCTGTTCGTGGTCAGTTATATTTGTGGAT...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAGTTGGGATCTTCCAATaGTGTTCTATACCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIVGIFQ*CSIPIS
Trigger: AGAGATGGGTATAGAACATCATTGGAAGATCCCAAC...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATATGTAGACGATCCACATaGACTTTGACTCCTCCAATT +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSICRRST*TLTPPI
Trigger: AATTGGAGGAGTCAAAGTTCATGTGGATCGTCTACA...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGTGCTGCTTTGCCGTTTaGCTTTTGAATGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLCCFAV*LLNVWE
Trigger: CTCCCAAACATTCAAAAGTCAAACGGCAAAGCAGCA...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGCATTTTATAGCTGAGTaGTCCAGCTCATGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLHFIAE*SSSWVL
Trigger: AAGGACCCATGAGCTGGAGCACTCAGCTATAAAATG...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAGATTGGAAAACCTCATaGTCACGTTACGTTGATCCT +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIDWKTS*SRYVDP
Trigger: AGGATCAACGTAACGTGAGCATGAGGTTTTCCAATC...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGCTAGGGGTGCTGCTTTaGCGTTTGACTTTTGAATGT +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLLGVLL*RLTFEC
Trigger: ACATTCAAAAGTCAAACGGCAAAGCAGCACCCCTAG...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATATTCACCTCCCCAGCATaGTCAGTTCGTATATTAATG +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIFTSPA*SVRILM
Trigger: CATTAATATACGAACTGAGCATGCTGGGGAGGTGAA...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR GCA 90 bp TTCAAGAACAAGCTATTTCTCCTGTTAACTCCTTCACACCATTACAAAAATCACATCACTGCTTCCAAATaGTTGACATTCCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FKNKLFLLLTPSHHYKNHITASK*LTFPPS
Trigger: GGAAGGAGGGAATGTCAAGCATTTGGAAGCAGTGAT...GTGATTTTTGTAATGGTGTGAAGGAGTTAACAGGAGAAATAGCTTGTTCTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR CCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGGTGAAGACATGTTGTTaGGCGTGGATCCTGCTTAAA +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLVKTCC*AWILLK
Trigger: TTTAAGCAGGATCCACGCCCAACAACATGTCTTCAC...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGGTGATCTTGATTCTCTaGGTAACAGCGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLVILIL*VTASTK
Trigger: CTTTGTGCTCGCTGTTACCCAGAGAATCAAGATCAC...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCAATTCATCTCATACATaGTCATATCTGACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFNSSHT*SYLTGL
Trigger: CAACCCTGTCAGATATGACCATGTATGAGATGAATT...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAGTGTTCAGAAAAACTTaGAGTCTTTGGCTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIVFRKT*SLWLSA
Trigger: AGCAGAAAGCCAAAGACTTCAAGTTTTTCTGAACAC...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAGTCCTAACTTTTCATTaGTACCCAGCTGCAAATAAG +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIVLTFH*YPAANK
Trigger: CTTATTTGCAGCTGGGTATCAATGAAAAGTTAGGAC...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATACAATCATTCAGTTTTTaGAGAATTTCGTGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIQSFSF*RISWVG
Trigger: ACCCACCCACGAAATTCTTCAAAAACTGAATGATTG...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGCGATTGACTCAATACTaGAGCCACTCATCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLRLTQY*SHSSFL
Trigger: AAGAAAGGATGAGTGGCTTCAGTATTGAGTCAATCG...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR TCA 90 bp TTCAAGAACAAGCTATTTCTCCTGTTAACTCCTTCACACCATTACAAAAATCACATTACTAAACCTCTCTaGGACTCACGTTGTCTACCT +
Preference number: 4 (lower is better)
Translates to: FKNKLFLLLTPSHHYKNHITKPL*DSRCLP
Trigger: AGGTAGACAACGTGAGTCTCAGAGAGGTTTAGTAAT...GTGATTTTTGTAATGGTGTGAAGGAGTTAACAGGAGAAATAGCTTGTTCTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR GCA 90 bp AAGCTATTTCTCCTGTTAACTCCTTCACACCATTACAAAAATCACTGCTTCCAATGCGATGATATAAAGTaGTTGTCCCCAAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: KLFLLLTPSHHYKNHCFQCDDIK*LSPKKQ
Trigger: CTGTTTCTTTGGGGACAAGCACTTTATATCATCGCA...TTGGAAGCAGTGATTTTTGTAATGGTGTGAAGGAGTTAACAGGAGAAATAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR GCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAATCAGCCAGGAGTTTTaGGATGATATAAAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIISQEF*DDIKCL
Trigger: CAAGCACTTTATATCATCGCAAAACTCCTGGCTGAT...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGATAACTTCTTCTTCATaGCCAAAGGCACCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLITSSS*PKAPRV
Trigger: AACTCTGGGTGCCTTTGGGCATGAAGAAGAAGTTAT...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGCAGGATATCCTTCTGTaGTATGATGAAGTACTGGAG +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLQDILL*YDEVLE
Trigger: CTCCAGTACTTCATCATACCACAGAAGGATATCCTG...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCAAAACTCTTAAATTCTaGAAGCTCTTCTGTGTCACT +
Preference number: 4 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFKTLKF*KLFCVT
Trigger: AGTGACACAGAAGAGCTTCCAGAATTTAAGAGTTTT...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGGATCTGTCTGTACTGTaGCTGGTCAATATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLDLSVL*LVNISQ
Trigger: TTGGGAAATATTGACCAGCCACAGTACAGACAGATC...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGGATCCACATGAACTTTaGCTCCTCCAATTATTCCTT +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLDPHEL*LLQLFL
Trigger: AAGGAATAATTGGAGGAGTCAAAGTTCATGTGGATC...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGGATCCACATGAACTTTaGCTCCTCCAATTATTCCTT +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLDPHEL*LLQLFL
Trigger: AAGGAATAATTGGAGGAGTCAAAGTTCATGTGGATC...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAATCTATCTTCTCAGGTaGAACTCCAGTAAGATTGAT +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIIYLLR*NSSKID
Trigger: ATCAATCTTACTGGAGTTTCACCTGAGAAGATAGAT...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR GCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGAAGTCTTTGGCTTTCTaGTATAAGTGCCACATGAAC +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLKSLAF*YKCHMN
Trigger: GTTCATGTGGCACTTATAGCAGAAAGCCAAAGACTT...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAGCAGATTTTTCCATGTaGTCACACATCCATTCATTT +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIADFSM*SHIHSF
Trigger: AAATGAATGGATGTGTGAGCACATGGAAAAATCTGC...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR GCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCCATACAATTTCTTATaGAAGATCTCGGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLPYNFL*KISALY
Trigger: GTACAGTGCCGAGATCTTGCATAAGAAATTGTATGG...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CCA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAAATTCATCTCATACATaGTCATATCTGACAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LKAFTITVRLAMTCKRSINSSHT*SYLTGL
Trigger: CAACCCTGTCAGATATGACCATGTATGAGATGAATT...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGGCAGCAATGTTGACTTaGCAATTCTGTAATAATGGT +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLAAMLT*QFCNNG
Trigger: ACCATTATTACAGAATTGTCAAGTCAACATTGCTGC...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR TCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGTCATTTGATATCGATTaGCTCAATACTGAAGCCACT +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLSFDID*LNTEAT
Trigger: AGTGGCTTCAGTATTGAGTCAATCGATATCAAATGA...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR TCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTGTTTGTAAAGAGTTaGCAGGTAAAATCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLLFVKS*QVKSVS
Trigger: TGACACAGATTTTACCTGTCAACTCTTTACAAACAG...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564711.2
CDS-3UTR GCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGTCGAATGTAGCTCTGTaGTGCCATTATTATATTTGC +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLSNVAL*CHYYIC
Trigger: GCAAATATAATAATGGCAGCACAGAGCTACATTCGA...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR GCA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGGTTACCTGTTTGCCCTaGACTAAAACATTAGTAATG +
Preference number: 4 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLVTCLP*TKTLVM
Trigger: CATTACTAATGTTTTAGTGCAGGGCAAACAGGTAAC...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000566044.5
CDS-3UTR GCA 90 bp AGAGAAACAATAGCAAAAAGCCAAGTAAGAATGAGTCTGATGTGCTTATTGTACGCTAATAAACAAATATaGAAGGGGCCCATTCACTTA +
Preference number: 4 (lower is better)
Translates to: RETIAKSQVRMSLMCLLYANKQI*KGPIHL
Trigger: TAAGTGAATGGGCCCCTTGCATATTTGTTTATTAGC...GTACAATAAGCACATCAGACTCATTCTTACTTGGCTTTTTGCTATTGTTTCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGGGTATGATGAAGTACTaGAGTCAAAAGATCCTGATA +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLGMMKY*SQKILI
Trigger: TATCAGGATCTTTTGACTCCAGTACTTCATCATACC...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CCA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCACATAATAGTACTTTaGTACAACAGGATATCCTTC +
Preference number: 4 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLHIIVL*YNRISF
Trigger: GAAGGATATCCTGTTGTACCAAAGTACTATTATGTG...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS GCA 90 bp GCGCTTGGTCCGAGCTCTTCGCTCCAAGACCTTCCAGCTCACTTCTaGCGTGAGTCCCGCCGCCCCCGCCATCGCGCTCCGGTCGCCGCC +
Preference number: 5 (lower is better)
Translates to: ALGPSSSLQDLPAHF*RESRRPRHRAPVAA
Trigger: GGCGGCGACCGGAGCGCGATGGCGGGGGCGGCGGGACTCACGGCAGAAGTGAGCTGGAAGGTCTTGGAGCGAAGAGCTCGGACCAAGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000565424.2
ENST00000566037.6
ENST00000566044.5
ENST00000566721.1
CDS TCA 90 bp TGGTCCGAGCTCTTCGCTCCAAGACCTTCCAGCTCACTTCTGCCGTaGGTCCCGCCGCCCCCGCCATCGCGCTCCGGTCGCCGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: WSELFAPRPSSSLLP*VPPPPPSRSGRRLG
Trigger: GCCAAGGCGGCGACCGGAGCGCGATGGCGGGGGCGGCGGGACTCACGGCAGAAGTGAGCTGGAAGGTCTTGGAGCGAAGAGCTCGGACCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000566037.6
ENST00000566044.5
CDS-3UTR CAA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCACTGAGCCTGAGCGCTaGGTCCGAGCTCTTCGCTCC +
Preference number: 5 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPTEPER*VRALRS
Trigger: GGAGCGAAGAGCTCGGACCAAGCGCTCAGGCTCAGT...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS CCA 90 bp GCAAGAGCCAAAGCCCAGGCCCCAGCAGCGCAGTATAGGCTGTCCTaGATCTTGGCCTTCTGGTCACCACCGCATGTTTTAGTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: ARAKAQAPAAQYRLS*ILAFWSPPHVLVGK
Trigger: CTTTCCCACTAAAACATGCGGTGGTGACCAGAAGGCCAAGATCCAGGACAGCCTATACTGCGCTGCTGGGGCCTGGGCTTTGGCTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000563376.5
ENST00000566037.6
ENST00000566044.5
ENST00000567402.5
ENST00000570047.2
CDS-3UTR CAA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCAGGCTGTCCTGGATCTaGGCCTTCTGGTCACCACCG +
Preference number: 5 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPRLSWI*AFWSPP
Trigger: CGGTGGTGACCAGAAGGCCAAGATCCAGGACAGCCT...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS TCA 90 bp CTACAGGGGACTCAACCATGGCTGAAAGGGCCCCCTCCTCCAAGGTaGACTTCTCTTGTGAGAGCACACGGCCTTTGCAAACCCGATTCG +
Preference number: 5 (lower is better)
Translates to: LQGTQPWLKGPPPPR*TSLVRAHGLCKPDS
Trigger: CGAATCGGGTTTGCAAAGGCCGTGTGCTCTCACAAGAGAAGTTCACCTTGGAGGAGGGGGCCCTTTCAGCCATGGTTGAGTCCCCTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CAA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCACTGAGCCTGAGCGCTaGGTCCGAGCTCTTCGCTCC +
Preference number: 5 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTTEPER*VRALRS
Trigger: GGAGCGAAGAGCTCGGACCAAGCGCTCAGGCTCAGT...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAGCAACAATGATCCCATaGGGCGTGCGCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVATMIP*GVRSRI
Trigger: GATTCTGGAGCGCACGCCCAATGGGATCATTGTTGC...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTACAGAGTGAAGACATGTaGTTGGGCGTGGATCCTGCT +
Preference number: 5 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVQSEDM*LGVDPA
Trigger: AGCAGGATCCACGCCCAACAACATGTCTTCACTCTG...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCACCCAGCAGGATGGCTaGGCTAGCCAGACAACTGCA +
Preference number: 5 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTTQQDG*ASQTTA
Trigger: TGCAGTTGTCTGGCTAGCCAAGCCATCCTGCTGGGT...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGACCCAGCAGGATGGCTaGGCTAGCCAGACAACTGCA +
Preference number: 5 (lower is better)
Translates to: PAKDVAFTSPACSVRILMTQQDG*ASQTTA
Trigger: TGCAGTTGTCTGGCTAGCCAAGCCATCCTGCTGGGT...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGAGGCTGTCCTGGATCTaGGCCTTCTGGTCACCACCG +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMRLSWI*AFWSPP
Trigger: CGGTGGTGACCAGAAGGCCAAGATCCAGGACAGCCT...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTCTCTGGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAAGGCTGTCCTGGATCTaGGCCTTCTGGTCACCACCG +
Preference number: 5 (lower is better)
Translates to: ILWVTASTKFACCDCEHRRLSWI*AFWSPP
Trigger: CGGTGGTGACCAGAAGGCCAAGATCCAGGACAGCCT...TCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CAA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCTTCTAGAGCTGCTTTaGCTAAACCAACCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPLLELL*LNQPSS
Trigger: CGAGCTCGGTTGGTTTAGCAAAAGCAGCTCTAGAAG...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTACACGAACAGCCCTGGTaGCCAAAAAGGTTGAATCCA +
Preference number: 5 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVHEQPW*PKRLNP
Trigger: TGGATTCAACCTTTTTGGCAACCAGGGCTGTTCGTG...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCGAATGCGATAAATCTTaGATGTCCCGAGGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPECDKS*MSRGSQ
Trigger: TTGGCTGCCTCGGGACATCAAAGATTTATCGCATTC...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCTTTACTTAAAAGACTaGCTGCACGGCGTACAACCG +
Preference number: 5 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPLYLKD*LHGVQP
Trigger: CGGTTGTACGCCGTGCAGCAAGTCTTTTAAGTAAAG...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000566044.5
CDS-3UTR CAA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTACTTTACTTAAAAGACTaGCTGCACGGCGTACAACCG +
Preference number: 5 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVLYLKD*LHGVQP
Trigger: CGGTTGTACGCCGTGCAGCAAGTCTTTTAAGTAAAG...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000566044.5
CDS-3UTR CAA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAAGACACGGGTCATCATaGTTTGGCTTGACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVRHGSS*FGLTSP
Trigger: AGGAGAAGTCAAGCCAAACAATGATGACCCGTGTCT...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR CAA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCAGACACGGGTCATCATaGTTTGGCTTGACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPRHGSS*FGLTSP
Trigger: AGGAGAAGTCAAGCCAAACAATGATGACCCGTGTCT...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR CAA 90 bp GTGGAAGAGTGCTGTGGGCGTAGGTCTGAAGGGATTTTAGGGTGTTTGCCACAGGAGAGCACACGGCCTTaGCAAACCCGATTCGTATTT +
Preference number: 5 (lower is better)
Translates to: VEECCGRRSEGILGCLPQESTRP*QTRFVF
Trigger: AAATACGAATCGGGTTTGCAAAGGCCGTGTGCTCTC...CTGTGGCAAACACCCTAAAATCCCTTCAGACCTACGCCCACAGCACTCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS TCA 90 bp CTACCCACAGTGCTGTGGCTTTCCTTAGTGGTGCTCAGCAGAAGGTaGAGAAAGCTTGCTGGACAGATCCAAAGCAAGAAAGCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LPTVLWLSLVVLSRR*RKLAGQIQSKKACW
Trigger: CCAGCAAGCTTTCTTGCTTTGGATCTGTCCAGCAAGCTTTCTTCACCTTCTGCTGAGCACCACTAAGGAAAGCCACAGCACTGTGGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567402.5
CDS-3UTR CAA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATCTTCTAGAGCTGCTTTaGCTAAACCAACCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINLLELL*LNQPSS
Trigger: CGAGCTCGGTTGGTTTAGCAAAAGCAGCTCTAGAAG...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCGTGCTGCTTTGCCGTTaGACTTTTGAATGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPVLLCR*TFECLG
Trigger: TCCCAAACATTCAAAAGTCAAACGGCAAAGCAGCAC...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATTTCCATTCACTAATGTaGACATCCGGCTGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINFHSLM*TSGCCP
Trigger: GGGACAGCAGCCGGATGTCAACATTAGTGAATGGAA...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGTTCCATTCACTAATGTaGACATCCGGCTGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: PAKDVAFTSPACSVRILMFHSLM*TSGCCP
Trigger: GGGACAGCAGCCGGATGTCAACATTAGTGAATGGAA...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGACCCAGCAGGATGGCTaGGCTAGCCAGACAACTGCA +
Preference number: 5 (lower is better)
Translates to: AFTITVRLAMTCKRSITPTQQDG*ASQTTA
Trigger: TGCAGTTGTCTGGCTAGCCAAGCCATCCTGCTGGGT...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATATGGATGACCAGTTCTaGCTGAATGACCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINMDDQF*LNDRFP
Trigger: AGGGAAGCGGTCATTCAGCAAGAACTGGTCATCCAT...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCATTCCCAAGCCTTTATTACTGTGGTGGAAGAGTGCTGTGGGCATGGATGACCAGTTCTaGCTGAATGACCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: GRNSIPKPLLLWWKSAVGMDDQF*LNDRFP
Trigger: AGGGAAGCGGTCATTCAGCAAGAACTGGTCATCCAT...GCCCACAGCACTCTTCCACCACAGTAATAAAGGCTTGGGAATGCTGTTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CAA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCGATTCATCACCGCCTTaGTCAAATAGCTGCATGTTC +
Preference number: 5 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPDSSPP*SNSCMF
Trigger: GAACATGCAGCTATTTGACAAAGGCGGTGATGAATC...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR CAA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGAGGGTTTTCACCATGTaGGCTGGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: TITVRLAMTCKRSITPPRRVFTM*AGLVLN
Trigger: GTTCAAGACCAGCCCAGCCAACATGGTGAAAACCCT...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCAAAACACTCGGGAGTTaGAAGCTCAATCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFKTLGS*KLNLVN
Trigger: GTTCACAAGATTGAGCTTCAAACTCCCGAGTGTTTT...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGGCCATTTCAAATTGTaGGCTCTAATCATAAGCGTC +
Preference number: 5 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFGHFKL*ALIISV
Trigger: GACGCTTATGATTAGAGCCAACAATTTGAAATGGCC...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGCAGAGTGAAGACATGTaGTTGGGCGTGGATCCTGCT +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMQSEDM*LGVDPA
Trigger: AGCAGGATCCACGCCCAACAACATGTCTTCACTCTG...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCTTCTAGAGCTGCTTTTGCTAAACCAACCGAGCCTGCTGATTCTCAACTCAACCAGAGTGAAGACATGTaGTTGGGCGTGGATCCTGCT +
Preference number: 5 (lower is better)
Translates to: ASRAAFAKPTEPADSQLNQSEDM*LGVDPA
Trigger: AGCAGGATCCACGCCCAACAACATGTCTTCACTCTG...GTTGAGTTGAGAATCAGCAGGCTCGGTTGGTTTAGCAAAAGCAGCTCTAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CAA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGCTTCTAGAGCTGCTTTaGCTAAACCAACCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: TITVRLAMTCKRSITPPRLLELL*LNQPSS
Trigger: CGAGCTCGGTTGGTTTAGCAAAAGCAGCTCTAGAAG...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGAATGCGATAAATCTTaGATGTCCCGAGGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINECDKS*MSRGSQ
Trigger: TTGGCTGCCTCGGGACATCAAAGATTTATCGCATTC...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCCGGCTACCTCTTATATaGTCTTCCCGGATGAGAACA +
Preference number: 5 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTRLPLI*SSRMRT
Trigger: TGTTCTCATCCGGGAAGACAATATAAGAGGTAGCCG...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGCGGCTACCTCTTATATaGTCTTCCCGGATGAGAACA +
Preference number: 5 (lower is better)
Translates to: PAKDVAFTSPACSVRILMRLPLI*SSRMRT
Trigger: TGTTCTCATCCGGGAAGACAATATAAGAGGTAGCCG...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGTCCTTTGTGATGAAGTaGGGGCCTTCTCTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: PAKDVAFTSPACSVRILMSFVMK*GPSLLS
Trigger: GCTCAAAAGAGAAGGCCCCAACTTCATCACAAAGGA...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCATTCCCAAGCCTTTATTACTGTGGTGGAAGAGTGCTGTGGGCTCCTTTGTGATGAAGTaGGGGCCTTCTCTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: GRNSIPKPLLLWWKSAVGSFVMK*GPSLLS
Trigger: GCTCAAAAGAGAAGGCCCCAACTTCATCACAAAGGA...GCCCACAGCACTCTTCCACCACAGTAATAAAGGCTTGGGAATGCTGTTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CAA 90 bp AGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCAATAACTCAGGGTTATaGGAGATGATCCAGCCAATA +
Preference number: 5 (lower is better)
Translates to: RSITPPRMWHSPPQHAQFNNSGL*EMIQPI
Trigger: TATTGGCTGGATCATCTCCAATAACCCTGAGTTATT...GAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGGCAACAATGATCCCATaGGGCGTGCGCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: AFTITVRLAMTCKRSITPATMIP*GVRSRI
Trigger: GATTCTGGAGCGCACGCCCAATGGGATCATTGTTGC...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGTCATATCTGACAGGGTaGGTTGCTGAGGCAAATGCT +
Preference number: 5 (lower is better)
Translates to: PAKDVAFTSPACSVRILMSYLTG*VAEANA
Trigger: AGCATTTGCCTCAGCAACCAACCCTGTCAGATATGA...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS TCA 90 bp ACTTGGTTGAGCAGAAAGGCCAAGCTGTGGATTAATGATGAGGGCTaGCATGCATGTACTGACACCTTGGGAGGTTGGGAAAGACACCTA +
Preference number: 5 (lower is better)
Translates to: TWLSRKAKLWINDEG*HACTDTLGGWERHL
Trigger: TAGGTGTCTTTCCCAACCTCCCAAGGTGTCAGTACATGCATGTCAGCCCTCATCATTAATCCACAGCTTGGCCTTTCTGCTCAACCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565424.2
CDS GCA 90 bp AGAGATCATCCCAATGGGATTCTGAGATGGAGTTTCCATATGAGATaGTTTGGGATCATTCCACTGGGCCTACAGGGGACTCAACCATGG +
Preference number: 5 (lower is better)
Translates to: RDHPNGILRWSFHMR*FGIIPLGLQGTQPW
Trigger: CCATGGTTGAGTCCCCTGTAGGCCCAGTGGAATGATCCCAAAGCATCTCATATGGAAACTCCATCTCAGAATCCCATTGGGATGATCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS GCA 90 bp GCTGTGGCTTTCCTTAGTGGTGCTCAGCAGAAGGTGAAGAAAGCTTaGTGGACAGATCCAAAGCAAGAAAGCTTGCTGGACAGATCCAAA +
Preference number: 5 (lower is better)
Translates to: AVAFLSGAQQKVKKA*WTDPKQESLLDRSK
Trigger: TTTGGATCTGTCCAGCAAGCTTTCTTGCTTTGGATCTGTCCAGCAAGCTTTCTTCACCTTCTGCTGAGCACCACTAAGGAAAGCCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567402.5
CDS CCA 90 bp TCATCCCAATGGGATTCTGAGATGGAGTTTCCATATGAGATGCTTTaGGATCATTCCACTGGGCCTACAGGGGACTCAACCATGGCTGAA +
Preference number: 5 (lower is better)
Translates to: SSQWDSEMEFPYEML*DHSTGPTGDSTMAE
Trigger: TTCAGCCATGGTTGAGTCCCCTGTAGGCCCAGTGGAATGATCCCAAAGCATCTCATATGGAAACTCCATCTCAGAATCCCATTGGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CAA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCAGAGTGAAGACATGTaGTTGGGCGTGGATCCTGCT +
Preference number: 5 (lower is better)
Translates to: AFTITVRLAMTCKRSITPQSEDM*LGVDPA
Trigger: AGCAGGATCCACGCCCAACAACATGTCTTCACTCTG...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCTGCCATTATTATATTaGCTTCCTCTTTCCCAGACA +
Preference number: 5 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPLPLLY*LPLSQT
Trigger: TGTCTGGGAAAGAGGAAGCAAATATAATAATGGCAG...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCTTCTAGAGCTGCTTTTGCTAAACCAACCGAGCCTGCTGATTCTCAACTCAACCACGAACAGCCCTGGTaGCCAAAAAGGTTGAATCCA +
Preference number: 5 (lower is better)
Translates to: ASRAAFAKPTEPADSQLNHEQPW*PKRLNP
Trigger: TGGATTCAACCTTTTTGGCAACCAGGGCTGTTCGTG...GTTGAGTTGAGAATCAGCAGGCTCGGTTGGTTTAGCAAAAGCAGCTCTAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTTCCATTCACTAATGTaGACATCCGGCTGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMFHSLM*TSGCCP
Trigger: GGGACAGCAGCCGGATGTCAACATTAGTGAATGGAA...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATATTTCGTGGGTGGGTTaGTCCTTCCATTCACTAATG +
Preference number: 5 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINISWVG*SFHSLM
Trigger: CATTAGTGAATGGAAGGACAAACCCACCCACGAAAT...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GGCAGAAACAGCATTCCCAAGCCTTTATTACTGTGGTGGAAGAGTGCTGTGGGCATTTCGTGGGTGGGTTaGTCCTTCCATTCACTAATG +
Preference number: 5 (lower is better)
Translates to: GRNSIPKPLLLWWKSAVGISWVG*SFHSLM
Trigger: CATTAGTGAATGGAAGGACAAACCCACCCACGAAAT...GCCCACAGCACTCTTCCACCACAGTAATAAAGGCTTGGGAATGCTGTTTCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CAA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGAACCGACCAAAGTTTTaGGCTGCCAGCTCTTCTATA +
Preference number: 5 (lower is better)
Translates to: PAKDVAFTSPACSVRILMNRPKF*AASSSI
Trigger: TATAGAAGAGCTGGCAGCCAAAAACTTTGGTCGGTT...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000566044.5
CDS-3UTR CAA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAAATAACTCAGGGTTATaGGAGATGATCCAGCCAATA +
Preference number: 5 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVNNSGL*EMIQPI
Trigger: TATTGGCTGGATCATCTCCAATAACCCTGAGTTATT...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCACATCTTCCATTCTGTaGAGGCTGCAGAATATCCAG +
Preference number: 5 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTTSSIL*RLQNIQ
Trigger: CTGGATATTCTGCAGCCTCAACAGAATGGAAGATGT...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGAGGGTTTTCACCATGTaGGCTGGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: AFTITVRLAMTCKRSITPRVFTM*AGLVLN
Trigger: GTTCAAGACCAGCCCAGCCAACATGGTGAAAACCCT...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGGAAAAACAACTCTCTTaGGGGCAAGGGCTCAAACTC +
Preference number: 5 (lower is better)
Translates to: TITVRLAMTCKRSITPPREKQLS*GQGLKL
Trigger: GAGTTTGAGCCCTTGCCCCAAAGAGAGTTGTTTTTC...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS CCA 90 bp GTGGCTTTCCTTAGTGGTGCTCAGCAGAAGGTGAAGAAAGCTTGCTaGACAGATCCAAAGCAAGAAAGCTTGCTGGACAGATCCAAAGTT +
Preference number: 5 (lower is better)
Translates to: VAFLSGAQQKVKKAC*TDPKQESLLDRSKV
Trigger: AACTTTGGATCTGTCCAGCAAGCTTTCTTGCTTTGGATCTGTCCAGCAAGCTTTCTTCACCTTCTGCTGAGCACCACTAAGGAAAGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567402.5
CDS-3UTR CAA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATGGTTGCCAAAAAGGTaGAATCCATTAATTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVWLPKR*NPLIAS
Trigger: AGAAGCAATTAATGGATTCAACCTTTTTGGCAACCA...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCACGAACAGCCCTGGTaGCCAAAAAGGTTGAATCCA +
Preference number: 5 (lower is better)
Translates to: AFTITVRLAMTCKRSITPHEQPW*PKRLNP
Trigger: TGGATTCAACCTTTTTGGCAACCAGGGCTGTTCGTG...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ACTGACCACGAACAGCCCTGGTTGCCAAAAAGGTTGAATCCATTAATTGCTTCTCAGCGAGCACAAAGTTaGCCTGTTGCGATTGTGAGC +
Preference number: 5 (lower is better)
Translates to: TDHEQPWLPKRLNPLIASQRAQS*PVAIVS
Trigger: GCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTG...AGAAGCAATTAATGGATTCAACCTTTTTGGCAACCAGGGCTGTTCGTGGTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CAA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCGCACATAATAGTACTTaGGTACAACAGGATATCCTT +
Preference number: 5 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPAHNST*VQQDIL
Trigger: AAGGATATCCTGTTGTACCAAAGTACTATTATGTGC...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTAGCTAGGAAATCGTTTTaGACTACCAGGGTTATTTTT +
Preference number: 5 (lower is better)
Translates to: SITPPRMWHSPPQHAQFVARKSF*TTRVIF
Trigger: AAAAATAACCCTGGTAGTCAAAAACGATTTCCTAGC...TACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTCCCAATGGGTTCTACTTGTaGAGGAGTTTGAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: AMTCKRSITPPRMWHSPPNGFYL*RSLSLN
Trigger: ATTCAAACTCAAACTCCTCAACAAGTAGAACCCATT...GGGAGGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATCTGAATGGGTTCTACTaGTTGAGGAGTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINLNGFY*LRSLSL
Trigger: CAAACTCAAACTCCTCAACAAGTAGAACCCATTCAG...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATTTCGTGGGTGGGTTaGTCCTTCCATTCACTAATG +
Preference number: 5 (lower is better)
Translates to: TITVRLAMTCKRSITPPRISWVG*SFHSLM
Trigger: CATTAGTGAATGGAAGGACAAACCCACCCACGAAAT...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGGCAATCATTCAGTTTTaGAAGAATTTCGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PAKDVAFTSPACSVRILMAIIQF*KNFVGG
Trigger: CCCACCCACGAAATTCTTCAAAAACTGAATGATTGC...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGCAATCATTCAGTTTTaGAAGAATTTCGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINAIIQF*KNFVGG
Trigger: CCCACCCACGAAATTCTTCAAAAACTGAATGATTGC...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTCCTTTGTGATGAAGTaGGGGCCTTCTCTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMSFVMK*GPSLLS
Trigger: GCTCAAAAGAGAAGGCCCCAACTTCATCACAAAGGA...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTACTGTGGTGGAAGAGTGCTGTGGGCGTAGGTCTGAAGGGATTTTAGGGTGTAACCGACCAAAGTTTTaGGCTGCCAGCTCTTCTATA +
Preference number: 5 (lower is better)
Translates to: ITVVEECCGRRSEGILGCNRPKF*AASSSI
Trigger: TATAGAAGAGCTGGCAGCCAAAAACTTTGGTCGGTT...ACACCCTAAAATCCCTTCAGACCTACGCCCACAGCACTCTTCCACCACAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CAA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGATGGATGACCAGTTCTaGCTGAATGACCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: AFTITVRLAMTCKRSITPMDDQF*LNDRFP
Trigger: AGGGAAGCGGTCATTCAGCAAGAACTGGTCATCCAT...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTCATATCTGACAGGGTaGGTTGCTGAGGCAAATGCT +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMSYLTG*VAEANA
Trigger: AGCATTTGCCTCAGCAACCAACCCTGTCAGATATGA...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGGATTCATCACCGCCTTaGTCAAATAGCTGCATGTTC +
Preference number: 5 (lower is better)
Translates to: TITVRLAMTCKRSITPPRDSSPP*SNSCMF
Trigger: GAACATGCAGCTATTTGACAAAGGCGGTGATGAATC...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGAGACACGGGTCATCATaGTTTGGCTTGACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMRHGSS*FGLTSP
Trigger: AGGAGAAGTCAAGCCAAACAATGATGACCCGTGTCT...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR CAA 90 bp CCTTCCCCACTAGCTAATCAGACACGGGTCATCATTGTTTGGCTTGACTTCTCCACCATTACCGTTAGATaGGCTATGACATGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: PSPLANQTRVIIVWLDFSTITVR*AMTCKR
Trigger: CCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT...GGAGAAGTCAAGCCAAACAATGATGACCCGTGTCTGATTAGCTAGTGGGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564711.2
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGGAAAAACAACTCTCTTaGGGGCAAGGGCTCAAACTC +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMEKQLS*GQGLKL
Trigger: GAGTTTGAGCCCTTGCCCCAAAGAGAGTTGTTTTTC...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp AAGGCACCGGTGCAACTGTGTTCCTATGATGTGATATTCAGCCAGGCTGTTCAATATTGGTTCTGTCACTaGACAACTGTGGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: KAPVQLCSYDVIFSQAVQYWFCH*TTVGPW
Trigger: CCAAGGTCCCACAGTTGTCAAGTGACAGAACCAATA...TTGAACAGCCTGGCTGAATATCACATCATAGGAACACAGTTGCACCGGTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR CAA 90 bp TTTGCTAAACCAACCGAGCCTGCTGATTCTCAACTCAACAGAGGCTGGAGGAGGCTGCCATTATTATATTaGCTTCCTCTTTCCCAGACA +
Preference number: 5 (lower is better)
Translates to: FAKPTEPADSQLNRGWRRLPLLY*LPLSQT
Trigger: TGTCTGGGAAAGAGGAAGCAAATATAATAATGGCAG...CCTCCTCCAGCCTCTGTTGAGTTGAGAATCAGCAGGCTCGGTTGGTTTAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CAA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATTGTACTTGCTTAGGATaGCCTCTAAAAACTCCATCA +
Preference number: 5 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINCTCLG*PLKTPS
Trigger: TGATGGAGTTTTTAGAGGCAATCCTAAGCAAGTACA...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGTGTGTTCAGAAAAACTaGAAGTCTTTGGCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: PAKDVAFTSPACSVRILMCVQKN*KSLAFC
Trigger: GCAGAAAGCCAAAGACTTCAAGTTTTTCTGAACACA...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATTGTGTTCAGAAAAACTaGAAGTCTTTGGCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: PRQGCGIHLPSMLSSYINCVQKN*KSLAFC
Trigger: GCAGAAAGCCAAAGACTTCAAGTTTTTCTGAACACA...ATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTGTGTTCAGAAAAACTaGAAGTCTTTGGCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTCVQKN*KSLAFC
Trigger: GCAGAAAGCCAAAGACTTCAAGTTTTTCTGAACACA...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp AGAGGTGACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGTTCCATTCACTAATGTaGACATCCGGCTGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: RGDIMLDGKRSSQWDSEMFHSLM*TSGCCP
Trigger: GGGACAGCAGCCGGATGTCAACATTAGTGAATGGAA...CATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTCACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CAA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCAATAACTCAGGGTTATaGGAGATGATCCAGCCAATA +
Preference number: 5 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTNNSGL*EMIQPI
Trigger: TATTGGCTGGATCATCTCCAATAACCCTGAGTTATT...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGTCATATCTGACAGGGTaGGTTGCTGAGGCAAATGCT +
Preference number: 5 (lower is better)
Translates to: AFTITVRLAMTCKRSITPSYLTG*VAEANA
Trigger: AGCATTTGCCTCAGCAACCAACCCTGTCAGATATGA...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGAAAACACTCGGGAGTTaGAAGCTCAATCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: TITVRLAMTCKRSITPPRKTLGS*KLNLVN
Trigger: GTTCACAAGATTGAGCTTCAAACTCCCGAGTGTTTT...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp ACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGGCAGGCCATTTCAAATaGTTGGCTCTAATCATAAGC +
Preference number: 5 (lower is better)
Translates to: TITVRLAMTCKRSITPPRAGHFK*LALIIS
Trigger: GCTTATGATTAGAGCCAACAATTTGAAATGGCCTGC...CCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566044.5
CDS-3UTR CAA 90 bp GACCACGAACAGCCCTGGTTGCCAAAAAGGTTGAATCCATTAATTGCTTCTAGACTTCTAGAGCTGCTTTaGCTAAACCAACCGAGCCTG +
Preference number: 5 (lower is better)
Translates to: DHEQPWLPKRLNPLIASRLLELL*LNQPSL
Trigger: CAGGCTCGGTTGGTTTAGCAAAAGCAGCTCTAGAAG...TCTAGAAGCAATTAATGGATTCAACCTTTTTGGCAACCAGGGCTGTTCGTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS CCA 90 bp TTCCCAACGTGTCTTCAACAAGGAGAGAGAAATTCATCTCATACATaGTCATATCTGACAGGGTTGGTTGCTGAGGCAAATGCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: FPTCLQQGERNSSHT*SYLTGLVAEANASQ
Trigger: CTGGGAAGCATTTGCCTCAGCAACCAACCCTGTCAGATATGACCATGTATGAGATGAATTTCTCTCTCCTTGTTGAAGACACGTTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
ENST00000566319.2
CDS-3UTR CAA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCTGGTTGCCAAAAAGGTaGAATCCATTAATTGCTTCT +
Preference number: 5 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTWLPKR*NPLIAS
Trigger: AGAAGCAATTAATGGATTCAACCTTTTTGGCAACCA...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGGCTAGGAAATCGTTTTaGACTACCAGGGTTATTTTT +
Preference number: 5 (lower is better)
Translates to: PAKDVAFTSPACSVRILMARKSF*TTRVIF
Trigger: AAAAATAACCCTGGTAGTCAAAAACGATTTCCTAGC...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CCCGCCAAGGATGTGGCATTCACCTCCCCAGCATGCTCAGTTCGTATATTAATGTTGAGGAGTTTGAGTTaGAATACCATATGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: PAKDVAFTSPACSVRILMLRSLS*NTICVQ
Trigger: CTGAACACATATGGTATTCAAACTCAAACTCCTCAA...CATTAATATACGAACTGAGCATGCTGGGGAGGTGAATGCCACATCCTTGGCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGAACCGACCAAAGTTTTaGGCTGCCAGCTCTTCTATA +
Preference number: 5 (lower is better)
Translates to: AFTITVRLAMTCKRSITPNRPKF*AASSSI
Trigger: TATAGAAGAGCTGGCAGCCAAAAACTTTGGTCGGTT...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000566044.5
CDS-3UTR CAA 90 bp AGAGGTGACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGCTTTACTTAAAAGACTaGCTGCACGGCGTACAACCG +
Preference number: 5 (lower is better)
Translates to: RGDIMLDGKRSSQWDSEMLYLKD*LHGVQP
Trigger: CGGTTGTACGCCGTGCAGCAAGTCTTTTAAGTAAAG...CATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTCACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CAA 90 bp ATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGCATTCACCGAAACTCCAGTAAGATaGATCAGAAAAACAACTCTC +
Preference number: 5 (lower is better)
Translates to: IGYDMQEVHNPAKDVAFTETPVR*IRKTTL
Trigger: GAGAGTTGTTTTTCTGATCAATCTTACTGGAGTTTC...GGTGAATGCCACATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp TGGGATTCTGAGATGGAGTTTCCATATGAGATGCTTTGGGATCATTCCACTGGGGACAGTTATCTGAAGTaGTCTGATATCCCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: WDSEMEFPYEMLWDHSTGDSYLK*SDIPRA
Trigger: TGCCCTAGGGATATCAGACAACTTCAGATAACTGTC...CCCAGTGGAATGATCCCAAAGCATCTCATATGGAAACTCCATCTCAGAATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CAA 90 bp CTCTGGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGATTGTGAGCATCGAGATAGCAATTTGTTGCTTTaGTCTACCAAGTGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: LWVTASTKFACCDCEHRDSNLLL*STKCRK
Trigger: TTTCCTGCACTTGGTAGACAAAAGCAACAAATTGCT...ATCTCGATGCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS GCA 90 bp TTTATCAAGTGTCTGGCTAAAAAGAACTTCATCATCCAGGGCAAATaGAGGATAACTGATGCAGGGGAGCAGGGCAGCATCTGTATTATG +
Preference number: 5 (lower is better)
Translates to: FIKCLAKKNFIIQGK*RITDAGEQGSICIM
Trigger: CATAATACAGATGCTGCCCTGCTCCCCTGCATCAGTTATCCTGCATTTGCCCTGGATGATGAAGTTCTTTTTAGCCAGACACTTGATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
ENST00000567402.5
CDS GCA 90 bp TGCTGGACAGATCCAAAGTTGGAAGTGTGCGAGGTGGTAGTTAGTTaGAGGTGGTCCAATTCAAATGTAAGTGCTGTAAATATTGGCACA +
Preference number: 5 (lower is better)
Translates to: CWTDPKLEVCEVVVS*RWSNSNVSAVNIGT
Trigger: TGTGCCAATATTTACAGCACTTACATTTGAATTGGACCACCTGCAACTAACTACCACCTCGCACACTTCCAACTTTGGATCTGTCCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567402.5
CDS CCA 90 bp AGCTGTGGATTAATGATGAGGGCTGACATGCATGTACTGACACCTTaGGAGGTTGGGAAAGACACCTACTTCTTTCTTGCATCTGTTTAT +
Preference number: 5 (lower is better)
Translates to: SCGLMMRADMHVLTP*EVGKDTYFFLASVY
Trigger: ATAAACAGATGCAAGAAAGAAGTAGGTGTCTTTCCCAACCTCCCAAGGTGTCAGTACATGCATGTCAGCCCTCATCATTAATCCACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565424.2
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGCTGCCATTATTATATTaGCTTCCTCTTTCCCAGACA +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMLPLLY*LPLSQT
Trigger: TGTCTGGGAAAGAGGAAGCAAATATAATAATGGCAG...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp CTGCTTTTGCTAAACCAACCGAGCCTGCTGATTCTCAACTCAACAGAGGCTGGATGGTTGCCAAAAAGGTaGAATCCATTAATTGCTTCT +
Preference number: 5 (lower is better)
Translates to: LLLLNQPSLLILNSTEAGWLPKR*NPLIAS
Trigger: AGAAGCAATTAATGGATTCAACCTTTTTGGCAACCA...TCCAGCCTCTGTTGAGTTGAGAATCAGCAGGCTCGGTTGGTTTAGCAAAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570047.2
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTTGACTTTTGAATGTTaGGGAGGTTCTAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMLTFEC*GGSSSS
Trigger: TGAGGAACTAGAACCTCCCAAACATTCAAAAGTCAA...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp AGAGAAACAATAGCAAAAAGCCAAGTAAGAATGAGTCTGATGTGCTTATTGTACACCCAGCAGGATGGCTaGGCTAGCCAGACAACTGCA +
Preference number: 5 (lower is better)
Translates to: RETIAKSQVRMSLMCLLYTQQDG*ASQTTA
Trigger: TGCAGTTGTCTGGCTAGCCAAGCCATCCTGCTGGGT...GTACAATAAGCACATCAGACTCATTCTTACTTGGCTTTTTGCTATTGTTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS GCA 90 bp GCTGAAAACCTGCATTCCGCCTTTCACCTTTCCTGTTTAAGTGCATaGCTTTTGTTCAAGATTATATCCAGCCAACCAGGAATACAGGAA +
Preference number: 5 (lower is better)
Translates to: AENLHSAFHLSCLSA*LLFKIISSQPGIQE
Trigger: TTCCTGTATTCCTGGTTGGCTGGATATAATCTTGAACAAAAGGCATGCACTTAAACAGGAAAGGTGAAAGGCGGAATGCAGGTTTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567200.1
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTGGTTGCCAAAAAGGTaGAATCCATTAATTGCTTCT +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMWLPKR*NPLIAS
Trigger: AGAAGCAATTAATGGATTCAACCTTTTTGGCAACCA...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATACAGCGAGCACAAAGTTaGCCTGTTGCGATTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIQRAQS*PVAIVS
Trigger: GCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTG...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGTGTACTTGCTTAGGATaGCCTCTAAAAACTCCATCA +
Preference number: 5 (lower is better)
Translates to: AFTITVRLAMTCKRSITPCTCLG*PLKTPS
Trigger: TGATGGAGTTTTTAGAGGCAATCCTAAGCAAGTACA...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGGCACATAATAGTACTTaGGTACAACAGGATATCCTT +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMAHNST*VQQDIL
Trigger: AAGGATATCCTGTTGTACCAAAGTACTATTATGTGC...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGGCTAGGAAATCGTTTTaGACTACCAGGGTTATTTTT +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMARKSF*TTRVIF
Trigger: AAAAATAACCCTGGTAGTCAAAAACGATTTCCTAGC...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp ATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGCCAAGGATGTTGAGGAGTTTGAGTTaGAATACCATATGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: ITVRLAMTCKRSITPPRMLRSLS*NTICVQ
Trigger: CTGAACACATATGGTATTCAAACTCAAACTCCTCAA...CATCCTTGGCGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCGAATGCGATAAATCTTaGATGTCCCGAGGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFECDKS*MSRGSQ
Trigger: TTGGCTGCCTCGGGACATCAAAGATTTATCGCATTC...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp AGAGGTGACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGGCAATCATTCAGTTTTaGAAGAATTTCGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: RGDIMLDGKRSSQWDSEMAIIQF*KNFVGG
Trigger: CCCACCCACGAAATTCTTCAAAAACTGAATGATTGC...CATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTCACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS-3UTR CAA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGGCAACAATGATCCCATaGGGCGTGCGCTCCAGAATC +
Preference number: 5 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLATMIP*GVRSRI
Trigger: GATTCTGGAGCGCACGCCCAATGGGATCATTGTTGC...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TCCTATGATGTGATATTCAGCCAGGCTGTTCAAGAACAAGCTATTTCTCCTGTTGACAACTGTGGGACCTaGGAGAGATTACTAAACCTC +
Preference number: 5 (lower is better)
Translates to: SYDVIFSQAVQEQAISPVDNCGT*ERLLNL
Trigger: GAGGTTTAGTAATCTCTCCAAGGTCCCACAGTTGTC...AACAGGAGAAATAGCTTGTTCTTGAACAGCCTGGCTGAATATCACATCATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR CAA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATATTTAAAACTGAGCGCTaGGTCCGAGCTCTTCGCTCC +
Preference number: 5 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIFKTER*VRALRS
Trigger: GGAGCGAAGAGCTCGGACCAAGCGCTCAGTTTTAAA...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566044.5
CDS CCA 90 bp GCTGCAAATAAGCTTTCACAAGCTCCTGCTGAGGCCATATCTGAATaGGTTCTACTTGTTGAGGAGTTTGAGTTTGAATACCATATGTGT +
Preference number: 5 (lower is better)
Translates to: AANKLSQAPAEAISE*VLLVEEFEFEYHMC
Trigger: ACACATATGGTATTCAAACTCAAACTCCTCAACAAGTAGAACCCATTCAGATATGGCCTCAGCAGGAGCTTGTGAAAGCTTATTTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATACACGAACAGCCCTGGTaGCCAAAAAGGTTGAATCCA +
Preference number: 5 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIHEQPW*PKRLNP
Trigger: TGGATTCAACCTTTTTGGCAACCAGGGCTGTTCGTG...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGCAGCGAGCACAAAGTTaGCCTGTTGCGATTGTGAGC +
Preference number: 5 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLQRAQS*PVAIVS
Trigger: GCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTG...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCAGCGAGCACAAAGTTaGCCTGTTGCGATTGTGAGC +
Preference number: 5 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLQRAQS*PVAIVS
Trigger: GCTCACAATCGCAACAGGCAAACTTTGTGCTCGCTG...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGGCACATAATAGTACTTaGGTACAACAGGATATCCTT +
Preference number: 5 (lower is better)
Translates to: AFTITVRLAMTCKRSITPAHNST*VQQDIL
Trigger: AAGGATATCCTGTTGTACCAAAGTACTATTATGTGC...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAACCCCGAAAAACTTGAAGTCTTaGGCTTTCTGCTATAAGTGC +
Preference number: 5 (lower is better)
Translates to: AFTITVRLAMTCKRSITPKNLKS*AFCYKC
Trigger: GCACTTATAGCAGAAAGCCAAAGACTTCAAGTTTTT...CGGGGTTATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCGTGCTGCTTTGCCGTTaGACTTTTGAATGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFVLLCR*TFECLG
Trigger: TCCCAAACATTCAAAAGTCAAACGGCAAAGCAGCAC...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCATTTCGTGGGTGGGTTaGTCCTTCCATTCACTAATG +
Preference number: 5 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFISWVG*SFHSLM
Trigger: CATTAGTGAATGGAAGGACAAACCCACCCACGAAAT...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAATGGATGACCAGTTCTaGCTGAATGACCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIMDDQF*LNDRFP
Trigger: AGGGAAGCGGTCATTCAGCAAGAACTGGTCATCCAT...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS CCA 90 bp ACAGATCCAAAGTTGGAAGTGTGCGAGGTGGTAGTTAGTTGCAGGTaGTCCAATTCAAATGTAAGTGCTGTAAATATTGGCACAGAAAAT +
Preference number: 5 (lower is better)
Translates to: TDPKLEVCEVVVSCR*SNSNVSAVNIGTEN
Trigger: ATTTTCTGTGCCAATATTTACAGCACTTACATTTGAATTGGACCACCTGCAACTAACTACCACCTCGCACACTTCCAACTTTGGATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567402.5
CDS-3UTR CAA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCCTGAATGGGTTCTACTaGTTGAGGAGTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFLNGFY*LRSLSL
Trigger: CAAACTCAAACTCCTCAACAAGTAGAACCCATTCAG...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATACGGCTACCTCTTATATaGTCTTCCCGGATGAGAACA +
Preference number: 5 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIRLPLI*SSRMRT
Trigger: TGTTCTCATCCGGGAAGACAATATAAGAGGTAGCCG...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATATCCTTTGTGATGAAGTaGGGGCCTTCTCTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: LKAFTITVRLAMTCKRSISFVMK*GPSLLS
Trigger: GCTCAAAAGAGAAGGCCCCAACTTCATCACAAAGGA...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GACATCATGTTAGATGGCAAGAGATCATCCCAATGGGATTCTGAGATGGAGTTTAATAACTCAGGGTTATaGGAGATGATCCAGCCAATA +
Preference number: 5 (lower is better)
Translates to: DIMLDGKRSSQWDSEMEFNNSGL*EMIQPI
Trigger: TATTGGCTGGATCATCTCCAATAACCCTGAGTTATT...AAACTCCATCTCAGAATCCCATTGGGATGATCTCTTGCCATCTAACATGATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS GCA 90 bp AAAAACCTCAGAAATCAGCAAATTACCTCGAATGTAGCTCTGTGCTaGCATTATTATATTTGCTTCCTCTTTCCCAGACACCAAAGTCAG +
Preference number: 5 (lower is better)
Translates to: KNLRNQQITSNVALC*HYYICFLFPRHQSQ
Trigger: CTGACTTTGGTGTCTGGGAAAGAGGAAGCAAATATAATAATGGCAGCACAGAGCTACATTCGAGGTAATTTGCTGATTTCTGAGGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565424.2
CDS-3UTR CAA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCCTGATATTCCTGTACTaGCTTAGGATTGCCTCTAAA +
Preference number: 5 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFLIFLY*LRIASK
Trigger: TTTAGAGGCAATCCTAAGCAAGTACAGGAATATCAG...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp TTTAATTTTTCAGATCACTTTCACAGAACTCTCAGCATCCTAAGGCACCGGTGCGCTAGGAAATCGTTTTaGACTACCAGGGTTATTTTT +
Preference number: 5 (lower is better)
Translates to: FNFSDHFHRTLSILRHRCARKSF*TTRVIF
Trigger: AAAAATAACCCTGGTAGTCAAAAACGATTTCCTAGC...GCACCGGTGCCTTAGGATGCTGAGAGTTCTGTGAAAGTGATCTGAAAAATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS-3UTR CAA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCTTGACTTTTGAATGTTaGGGAGGTTCTAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFLTFEC*GGSSSS
Trigger: TGAGGAACTAGAACCTCCCAAACATTCAAAAGTCAA...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATAGATTCATCACCGCCTTaGTCAAATAGCTGCATGTTC +
Preference number: 5 (lower is better)
Translates to: LKAFTITVRLAMTCKRSIDSSPP*SNSCMF
Trigger: GAACATGCAGCTATTTGACAAAGGCGGTGATGAATC...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000564711.2
ENST00000566044.5
CDS-3UTR CAA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCGCCAACCAAAGTTTTaGGCTGCCAGCTCTTCTATA +
Preference number: 5 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLRQPKF*AASSSI
Trigger: TATAGAAGAGCTGGCAGCCAAAAACTTTGGTTGGCG...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323584.10
CDS-3UTR CAA 90 bp TTTAATTTTTCAGATCACTTTCACAGAACTCTCAGCATCCTAAGGCACCGGTGCACTGATGGGGCATCTTaGTGTTTAATTTTTCAGATC +
Preference number: 5 (lower is better)
Translates to: FNFSDHFHRTLSILRHRCTDGAS*CLIFQI
Trigger: GATCTGAAAAATTAAACACAAAGATGCCCCATCAGT...GCACCGGTGCCTTAGGATGCTGAGAGTTCTGTGAAAGTGATCTGAAAAATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS TCA 90 bp CTCTGGGAACAGACTACCTCTGTAGAACAAATTGGTTATTTTTCGTaGAGCAACTACAATCACTGGGATTCATTCAACTTAAGTGACAAG +
Preference number: 5 (lower is better)
Translates to: LWEQTTSVEQIGYFS*SNYNHWDSFNLSDK
Trigger: CTTGTCACTTAAGTTGAATGAATCCCAGTGATTGTAGTTGCTTCACGAAAAATAACCAATTTGTTCTACAGAGGTAGTCTGTTCCCAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568171.1
CDS CCA 90 bp CTACTATGTAACAATGCTCAGAACTCTGTGGGGAGGACTCTATACTaGAGTCAGGTTAGTCAAGTGTTTAACAAAGCTCCATTTATATAT +
Preference number: 5 (lower is better)
Translates to: LLCNNAQNSVGRTLY*SQVSQVFNKAPFIY
Trigger: ATATATAAATGGAGCTTTGTTAAACACTTGACTAACCTGACTCCAGTATAGAGTCCTCCCCACAGAGTTCTGAGCATTGTTACATAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564873.1
CDS-3UTR CAA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCAATGGGTTCTACTTGTaGAGGAGTTTGAGTTTGAAT +
Preference number: 5 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFNGFYL*RSLSLN
Trigger: ATTCAAACTCAAACTCCTCAACAAGTAGAACCCATT...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS-3UTR CAA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATACTGAATGGGTTCTACTaGTTGAGGAGTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: LKAFTITVRLAMTCKRSILNGFY*LRSLSL
Trigger: CAAACTCAAACTCCTCAACAAGTAGAACCCATTCAG...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGGTGCTGCTTTGCCGTTaGACTTTTGAATGTTTGGGA +
Preference number: 5 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLVLLCR*TFECLG
Trigger: TCCCAAACATTCAAAAGTCAAACGGCAAAGCAGCAC...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp GTTATGAGAAATGTGACTGACAGCAGATTTTTCCATGTGCTCACACATCCATTCGAAACTCCAGTAAGATaGATCAGAAAAACAACTCTC +
Preference number: 5 (lower is better)
Translates to: VMRNVTDSRFFHVLTHPFETPVR*IRKTTL
Trigger: GAGAGTTGTTTTTCTGATCAATCTTACTGGAGTTTC...GAATGGATGTGTGAGCACATGGAAAAATCTGCTGTCAGTCACATTTCTCATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000299167.12
ENST00000323584.10
CDS TCA 90 bp TTGATTAGGGAGGGAGGGTGTATAGGAGGGATTAAGAGGGTATTCTaGTTTTGCATTAACAAGTTCATTACTAAATCTGTCACTAGTACA +
Preference number: 5 (lower is better)
Translates to: LIREGGCIGGIKRVF*FCINKFITKSVTST
Trigger: TGTACTAGTGACAGATTTAGTAATGAACTTGTTAATGCAAAATCAGAATACCCTCTTAATCCCTCCTATACACCCTCCCTCCCTAATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566319.2
CDS-3UTR CAA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATACTGATATTCCTGTACTaGCTTAGGATTGCCTCTAAA +
Preference number: 5 (lower is better)
Translates to: LKAFTITVRLAMTCKRSILIFLY*LRIASK
Trigger: TTTAGAGGCAATCCTAAGCAAGTACAGGAATATCAG...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATATTGACTTTTGAATGTTaGGGAGGTTCTAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LKAFTITVRLAMTCKRSILTFEC*GGSSSS
Trigger: TGAGGAACTAGAACCTCCCAAACATTCAAAAGTCAA...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGGCAATCATTCAGTTTTaGAAGAATTTCGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLAIIQF*KNFVGG
Trigger: CCCACCCACGAAATTCTTCAAAAACTGAATGATTGC...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS TCA 90 bp CTTAATTTCAGCTGGCTTGTAGTAGCATCTGTTGGGATCTTCCAATaGTGTTCTATACCCATCTCTCAAGAAACGTTTAAATCCATATTT +
Preference number: 5 (lower is better)
Translates to: LNFSWLVVASVGIFQ*CSIPISQETFKSIF
Trigger: AAATATGGATTTAAACGTTTCTTGAGAGATGGGTATAGAACATCATTGGAAGATCCCAACAGATGCTACTACAAGCCAGCTGAAATTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
ENST00000567402.5
CDS TCA 90 bp GCTATTGTTGCTTATTCAAACGCAGTAAACCACAGCTCAAGATGTTaGTCACACACCTTACTGGTAACAATGAATGTTAAGTTTTATGTG +
Preference number: 5 (lower is better)
Translates to: AIVAYSNAVNHSSRC*SHTLLVTMNVKFYV
Trigger: CACATAAAACTTAACATTCATTGTTACCAGTAAGGTGTGTGATCAACATCTTGAGCTGTGGTTTACTGCGTTTGAATAAGCAACAATAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565424.2
CDS-3UTR CAA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGTGTACTTGCTTAGGATaGCCTCTAAAAACTCCATCA +
Preference number: 5 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLCTCLG*PLKTPS
Trigger: TGATGGAGTTTTTAGAGGCAATCCTAAGCAAGTACA...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TTAAAAGCATTTACCATTACCGTTAGATTGGCTATGACATGCAAGAGGTCCATATCTGTTTGTAAAGAGTaGACAGGTAAAATCTGTGTC +
Preference number: 5 (lower is better)
Translates to: LKAFTITVRLAMTCKRSISVCKE*TGKICV
Trigger: GACACAGATTTTACCTGTCAACTCTTTACAAACAGA...TATGGACCTCTTGCATGTCATAGCCAATCTAACGGTAATGGTAAATGCTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564711.2
CDS-3UTR CAA 90 bp TCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGCTTGAAAAACTTGAAGTCTTaGGCTTTCTGCTATAAGTGC +
Preference number: 5 (lower is better)
Translates to: SVRITIIVGIIMRTFSCLKNLKS*AFCYKC
Trigger: GCACTTATAGCAGAAAGCCAAAGACTTCAAGTTTTT...CAAGCAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS-3UTR CAA 90 bp TCACTCAGTGAGGATTACTATTATAGTTGGCATAATCATGAGAACTTTTTCCTGTTGAGGAGTTTGAGTTaGAATACCATATGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: SLSEDYYYSWHNHENFFLLRSLS*NTICVQ
Trigger: CTGAACACATATGGTATTCAAACTCAAACTCCTCAA...CAGGAAAAAGTTCTCATGATTATGCCAACTATAATAGTAATCCTCACTGAGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS GCA 72 bp CCGAGCTCTTCGCTCCAAGACCTTCCAGCTCACTTCTaGCGTGAGTCCCGCCGCCCCCGCCATCGCGCTCCG +
Preference number: 6 (lower is better)
Translates to: PSSSLQDLPAHF*RESRRPRHRAP
Trigger: CGGAGCGCGATGGCGGGGGCGGCGGGACTCACGGCAGAAGTGAGCTGGAAGGTCTTGGAGCGAAGAGCTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000565424.2
ENST00000566037.6
ENST00000566044.5
ENST00000566721.1
ENST00000567402.5
CDS CAA 90 bp GCCAAAGCCCAGGCCCCAGCAGCGCAGTATAGGCTGTCCTGGATCTaGGCCTTCTGGTCACCACCGCATGTTTTAGTGGGAAAGAGACCG +
Preference number: 6 (lower is better)
Translates to: AKAQAPAAQYRLSWI*AFWSPPHVLVGKRP
Trigger: CGGTCTCTTTCCCACTAAAACATGCGGTGGTGACCAGAAGGCCAAGATCCAGGACAGCCTATACTGCGCTGCTGGGGCCTGGGCTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000563376.5
ENST00000566037.6
ENST00000566044.5
ENST00000567402.5
ENST00000570047.2
CDS CAA 72 bp CAGGCCCCAGCAGCGCAGTATAGGCTGTCCTGGATCTaGGCCTTCTGGTCACCACCGCATGTTTTAGTGGGA +
Preference number: 6 (lower is better)
Translates to: QAPAAQYRLSWI*AFWSPPHVLVG
Trigger: TCCCACTAAAACATGCGGTGGTGACCAGAAGGCCAAGATCCAGGACAGCCTATACTGCGCTGCTGGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000563376.5
ENST00000566037.6
ENST00000566044.5
ENST00000567402.5
ENST00000570047.2
CDS TCA 72 bp TCATTCCACTGGGCCTACAGGGGACTCAACCATGGCTaGAAGGGCCCCCTCCTCCAAGGTGAACTTCTCTTG +
Preference number: 6 (lower is better)
Translates to: SFHWAYRGLNHG*KGPLLQGELLL
Trigger: CAAGAGAAGTTCACCTTGGAGGAGGGGGCCCTTTCAGCCATGGTTGAGTCCCCTGTAGGCCCAGTGGAATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS CCA 72 bp AAAGCCCAGGCCCCAGCAGCGCAGTATAGGCTGTCCTaGATCTTGGCCTTCTGGTCACCACCGCATGTTTTA +
Preference number: 6 (lower is better)
Translates to: KAQAPAAQYRLS*ILAFWSPPHVL
Trigger: TAAAACATGCGGTGGTGACCAGAAGGCCAAGATCCAGGACAGCCTATACTGCGCTGCTGGGGCCTGGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000563376.5
ENST00000566037.6
ENST00000566044.5
ENST00000567402.5
ENST00000570047.2
CDS TCA 72 bp GGGTTGGTTGCTGAGGCAAATGCTTCCCAGCAACAATaGTCCCATTGGGCGTGCGCTCCAGAATCTGCCACA +
Preference number: 6 (lower is better)
Translates to: GLVAEANASQQQ*SHWACAPESAT
Trigger: TGTGGCAGATTCTGGAGCGCACGCCCAATGGGATCATTGTTGCTGGGAAGCATTTGCCTCAGCAACCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
ENST00000566319.2
CDS TCA 72 bp TACAAGTCCAAGGCTGGCTTGTCTCCGCCACGGATCTaGAGTTCATACTCCATGGCATGGATGATCCACCCG +
Preference number: 6 (lower is better)
Translates to: YKSKAGLSPPRI*SSYSMAWMIHP
Trigger: CGGGTGGATCATCCATGCCATGGAGTATGAACTTCAGATCCGTGGCGGAGACAAGCCAGCCTTGGACTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
ENST00000566319.2
CDS TCA 72 bp TCCAGCAGAAGCTGTTTAACTTCACTAGGTGACAGCTaGTACAAGTCCAAGGCTGGCTTGTCTCCGCCACGG +
Preference number: 6 (lower is better)
Translates to: SSRSCLTSLGDS*YKSKAGLSPPR
Trigger: CCGTGGCGGAGACAAGCCAGCCTTGGACTTGTATCAGCTGTCACCTAGTGAAGTTAAACAGCTTCTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
ENST00000566319.2
CDS GCA 72 bp CAGCCCCGTAGCGCACCGCCAACCAAAGTTTTTGGCTaGCAGCTCTTCTATAGACTCTCTCAATGTGATCAG +
Preference number: 6 (lower is better)
Translates to: QPRSAPPTKVFG*QLFYRLSQCDQ
Trigger: CTGATCACATTGAGAGAGTCTATAGAAGAGCTGGCAGCCAAAAACTTTGGTTGGCGGTGCGCTACGGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323584.10
CDS TCA 72 bp AGCAGAAAGGCCAAGCTGTGGATTAATGATGAGGGCTaGCATGCATGTACTGACACCTTGGGAGGTTGGGAA +
Preference number: 6 (lower is better)
Translates to: SRKAKLWINDEG*HACTDTLGGWE
Trigger: TTCCCAACCTCCCAAGGTGTCAGTACATGCATGTCAGCCCTCATCATTAATCCACAGCTTGGCCTTTCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565424.2
CDS GCA 72 bp TGTCTGGCTAAAAAGAACTTCATCATCCAGGGCAAATaGAGGATAACTGATGCAGGGGAGCAGGGCAGCATC +
Preference number: 6 (lower is better)
Translates to: CLAKKNFIIQGK*RITDAGEQGSI
Trigger: GATGCTGCCCTGCTCCCCTGCATCAGTTATCCTGCATTTGCCCTGGATGATGAAGTTCTTTTTAGCCAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
ENST00000567402.5
CDS GCA 72 bp CCCAATGGGATTCTGAGATGGAGTTTCCATATGAGATaGTTTGGGATCATTCCACTGGGCCTACAGGGGACT +
Preference number: 6 (lower is better)
Translates to: PNGILRWSFHMR*FGIIPLGLQGT
Trigger: AGTCCCCTGTAGGCCCAGTGGAATGATCCCAAAGCATCTCATATGGAAACTCCATCTCAGAATCCCATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS CCA 72 bp GAATGCGATAAATCTTTGATGTCCCGAGGCAGCCAATaGGCCTGTCTGGCCTTCCAGAGAGTCCTAACTTTT +
Preference number: 6 (lower is better)
Translates to: ECDKSLMSRGSQ*ACLAFQRVLTF
Trigger: AAAAGTTAGGACTCTCTGGAAGGCCAGACAGGCCCATTGGCTGCCTCGGGACATCAAAGATTTATCGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS CCA 72 bp TGGGATTCTGAGATGGAGTTTCCATATGAGATGCTTTaGGATCATTCCACTGGGCCTACAGGGGACTCAACC +
Preference number: 6 (lower is better)
Translates to: WDSEMEFPYEML*DHSTGPTGDST
Trigger: GGTTGAGTCCCCTGTAGGCCCAGTGGAATGATCCCAAAGCATCTCATATGGAAACTCCATCTCAGAATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566275.2
CDS CAA 72 bp ATTTCGTGGGTGGGTTTGTCCTTCCATTCACTAATGTaGACATCCGGCTGCTGTCCCAGTTCAGGAGCACTA +
Preference number: 6 (lower is better)
Translates to: ISWVGLSFHSLM*TSGCCPSSGAL
Trigger: TAGTGCTCCTGAACTGGGACAGCAGCCGGATGTCAACATTAGTGAATGGAAGGACAAACCCACCCACGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
ENST00000566275.2
ENST00000568171.1
CDS CAA 90 bp GCTGGACAGATCCAAAGCAAGAAAGCTTGCTGGACAGATCCAAAGTaGGAAGTGTGCGAGGTGGTAGTTAGTTGCAGGTGGTCCAATTCA +
Preference number: 6 (lower is better)
Translates to: AGQIQSKKACWTDPK*EVCEVVVSCRWSNS
Trigger: TGAATTGGACCACCTGCAACTAACTACCACCTCGCACACTTCCAACTTTGGATCTGTCCAGCAAGCTTTCTTGCTTTGGATCTGTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567402.5
CDS TCA 72 bp GTGCTGTGGCTTTCCTTAGTGGTGCTCAGCAGAAGGTaGAGAAAGCTTGCTGGACAGATCCAAAGCAAGAAA +
Preference number: 6 (lower is better)
Translates to: VLWLSLVVLSRR*RKLAGQIQSKK
Trigger: TTTCTTGCTTTGGATCTGTCCAGCAAGCTTTCTTCACCTTCTGCTGAGCACCACTAAGGAAAGCCACAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567402.5
CDS GCA 72 bp TTGCTGCACGGCGTACAACCGACCAAAGTTTTTGGCTaGCAGCTCTTCTATAGACTCTCTCAATGTGATCAG +
Preference number: 6 (lower is better)
Translates to: LLHGVQPTKVFG*QLFYRLSQCDQ
Trigger: CTGATCACATTGAGAGAGTCTATAGAAGAGCTGGCAGCCAAAAACTTTGGTCGGTTGTACGCCGTGCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000566044.5
ENST00000566275.2
CDS CAA 72 bp ATCCAAAGCAAGAAAGCTTGCTGGACAGATCCAAAGTaGGAAGTGTGCGAGGTGGTAGTTAGTTGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: IQSKKACWTDPK*EVCEVVVSCRW
Trigger: CCACCTGCAACTAACTACCACCTCGCACACTTCCAACTTTGGATCTGTCCAGCAAGCTTTCTTGCTTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567402.5
CDS CCA 72 bp GCAGGGCAGCATCTGTATTATGTGATCTTGATTCTCTaGGTAACAGCGAGCACAAAGTTTGCCTGTTGCGAT +
Preference number: 6 (lower is better)
Translates to: AGQHLYYVILIL*VTASTKFACCD
Trigger: ATCGCAACAGGCAAACTTTGTGCTCGCTGTTACCCAGAGAATCAAGATCACATAATACAGATGCTGCCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
ENST00000567402.5
CDS CAA 90 bp GTTAACGCCTTCATATTGGTTCTGTCACTTGACAACTGTGGGACCTaGGAGAGATTACTAAACCTCTCTGAGACTCACGTTGTCTACCTG +
Preference number: 6 (lower is better)
Translates to: VNAFILVLSLDNCGT*ERLLNLSETHVVYL
Trigger: CAGGTAGACAACGTGAGTCTCAGAGAGGTTTAGTAATCTCTCCAAGGTCCCACAGTTGTCAAGTGACAGAACCAATATGAAGGCGTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS TCA 72 bp AAGGAGAGAGAAATTCATCTCATACATGGTCATATCTaGCAGGGTTGGTTGCTGAGGCAAATGCTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: KEREIHLIHGHI*QGWLLRQMLPS
Trigger: GCTGGGAAGCATTTGCCTCAGCAACCAACCCTGTCAGATATGACCATGTATGAGATGAATTTCTCTCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
ENST00000566319.2
CDS TCA 72 bp CAACTGTGGGACCTTGGAGAGATTACTAAACCTCTCTaGGACTCACGTTGTCTACCTGATTGGAAAACCTCA +
Preference number: 6 (lower is better)
Translates to: QLWDLGEITKPL*DSRCLPDWKTS
Trigger: TGAGGTTTTCCAATCAGGTAGACAACGTGAGTCTCAGAGAGGTTTAGTAATCTCTCCAAGGTCCCACAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS CAA 72 bp TCACATCATCATTTGGAGGAAACACTGCCCAGGACATaGAACCTAACAGCTGAAATTTCCCAGACTGCAGGA +
Preference number: 6 (lower is better)
Translates to: SHHHLEETLPRT*NLTAEISQTAG
Trigger: TCCTGCAGTCTGGGAAATTTCAGCTGTTAGGTTCAATGTCCTGGGCAGTGTTTCCTCCAAATGATGATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566319.2
CDS TCA 72 bp AGCAACTCATCTCCTGTATGCACATTGAAAACAGAGTaGAGACATGTTGTTGGGCGTGGATCCTGCTTAAAC +
Preference number: 6 (lower is better)
Translates to: SNSSPVCTLKTE*RHVVGRGSCLN
Trigger: GTTTAAGCAGGATCCACGCCCAACAACATGTCTTCACTCTGTTTTCAATGTGCATACAGGAGATGAGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566037.6
ENST00000566044.5
ENST00000567402.5
ENST00000570047.2
CDS TCA 72 bp CCTCATAGGAAAGCAACTCATCTCCTGTATGCACATTaGAAACAGAGTGAAGACATGTTGTTGGGCGTGGAT +
Preference number: 6 (lower is better)
Translates to: PHRKATHLLYAH*KQSEDMLLGVD
Trigger: ATCCACGCCCAACAACATGTCTTCACTCTGTTTTCAATGTGCATACAGGAGATGAGTTGCTTTCCTATGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566037.6
ENST00000566044.5
ENST00000567402.5
ENST00000570047.2
CDS CCA 72 bp AACAATGCTCAGAACTCTGTGGGGAGGACTCTATACTaGAGTCAGGTTAGTCAAGTGTTTAACAAAGCTCCA +
Preference number: 6 (lower is better)
Translates to: NNAQNSVGRTLY*SQVSQVFNKAP
Trigger: TGGAGCTTTGTTAAACACTTGACTAACCTGACTCCAGTATAGAGTCCTCCCCACAGAGTTCTGAGCATTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564873.1
CDS GCA 72 bp GATCCAAAGTTGGAAGTGTGCGAGGTGGTAGTTAGTTaGAGGTGGTCCAATTCAAATGTAAGTGCTGTAAAT +
Preference number: 6 (lower is better)
Translates to: DPKLEVCEVVVS*RWSNSNVSAVN
Trigger: ATTTACAGCACTTACATTTGAATTGGACCACCTGCAACTAACTACCACCTCGCACACTTCCAACTTTGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567402.5
CDS CCA 72 bp AAGCTTTCACAAGCTCCTGCTGAGGCCATATCTGAATaGGTTCTACTTGTTGAGGAGTTTGAGTTTGAATAC +
Preference number: 6 (lower is better)
Translates to: KLSQAPAEAISE*VLLVEEFEFEY
Trigger: GTATTCAAACTCAAACTCCTCAACAAGTAGAACCCATTCAGATATGGCCTCAGCAGGAGCTTGTGAAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
CDS CCA 72 bp AAGTTGGAAGTGTGCGAGGTGGTAGTTAGTTGCAGGTaGTCCAATTCAAATGTAAGTGCTGTAAATATTGGC +
Preference number: 6 (lower is better)
Translates to: KLEVCEVVVSCR*SNSNVSAVNIG
Trigger: GCCAATATTTACAGCACTTACATTTGAATTGGACCACCTGCAACTAACTACCACCTCGCACACTTCCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567402.5
CDS CAA 72 bp TTCATATTGGTTCTGTCACTTGACAACTGTGGGACCTaGGAGAGATTACTAAACCTCTCTGAGACTCACGTT +
Preference number: 6 (lower is better)
Translates to: FILVLSLDNCGT*ERLLNLSETHV
Trigger: AACGTGAGTCTCAGAGAGGTTTAGTAATCTCTCCAAGGTCCCACAGTTGTCAAGTGACAGAACCAATATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568439.1
CDS CAA 90 bp TATTTAACCTTCAGAGTGCAAATAAGCCCACACATTTCAAGCAGCTaGGGTTTTCAAATTCTGTGCATGTTACCTGTTTCCCATGTACCA +
Preference number: 6 (lower is better)
Translates to: YLTFRVQISPHISSS*GFQILCMLPVSHVP
Trigger: TGGTACATGGGAAACAGGTAACATGCACAGAATTTGAAAACCCAAGCTGCTTGAAATGTGTGGGCTTATTTGCACTCTGAAGGTTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566319.2
CDS CAA 90 bp TGGGTAGTCTTTAAAATATACACAGTGGAATCCTCACATCATCATTaGGAGGAAACACTGCCCAGGACATTGAACCTAACAGCTGAAATT +
Preference number: 6 (lower is better)
Translates to: WVVFKIYTVESSHHH*EETLPRTLNLTAEI
Trigger: AATTTCAGCTGTTAGGTTCAATGTCCTGGGCAGTGTTTCCTCCAAATGATGATGTGAGGATTCCACTGTGTATATTTTAAAGACTACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566319.2
CDS TCA 72 bp AGAGACCTCATCAGTGTTGTAGATAATCTGGAGTCCTaGGGAAATCATTTCCACAAGGTAAAGGAGATAAAG +
Preference number: 6 (lower is better)
Translates to: RDLISVVDNLES*GNHFHKVKEIK
Trigger: CTTTATCTCCTTTACCTTGTGGAAATGATTTCCTCAGGACTCCAGATTATCTACAACACTGATGAGGTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566037.6
ENST00000566044.5
ENST00000567402.5
ENST00000570047.2
CDS TCA 72 bp AGCTGGCTTGTAGTAGCATCTGTTGGGATCTTCCAATaGTGTTCTATACCCATCTCTCAAGAAACGTTTAAA +
Preference number: 6 (lower is better)
Translates to: SWLVVASVGIFQ*CSIPISQETFK
Trigger: TTTAAACGTTTCTTGAGAGATGGGTATAGAACATCATTGGAAGATCCCAACAGATGCTACTACAAGCCAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
ENST00000567402.5
CDS CCA 72 bp CAATCTCTGGGAACAGACTACCTCTGTAGAACAAATTaGTTATTTTTCGTGAAGCAACTACAATCACTGGGA +
Preference number: 6 (lower is better)
Translates to: QSLGTDYLCRTN*LFFVKQLQSLG
Trigger: TCCCAGTGATTGTAGTTGCTTCACGAAAAATAACCAATTTGTTCTACAGAGGTAGTCTGTTCCCAGAGATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568171.1
CDS CCA 72 bp TACAACAGGATATCCTTCTGTGGTATGATGAAGTACTaGAGTCAAAAGATCCTGATATTCCTGTACTTGCTT +
Preference number: 6 (lower is better)
Translates to: YNRISFCGMMKY*SQKILIFLYLL
Trigger: AAGCAAGTACAGGAATATCAGGATCTTTTGACTCCAGTACTTCATCATACCACAGAAGGATATCCTGTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5
ENST00000566436.1
CDS CAA 72 bp TTTAAAATATACACAGTGGAATCCTCACATCATCATTaGGAGGAAACACTGCCCAGGACATTGAACCTAACA +
Preference number: 6 (lower is better)
Translates to: FKIYTVESSHHH*EETLPRTLNLT
Trigger: TGTTAGGTTCAATGTCCTGGGCAGTGTTTCCTCCAAATGATGATGTGAGGATTCCACTGTGTATATTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566319.2
CDS TCA 72 bp CAGACTACCTCTGTAGAACAAATTGGTTATTTTTCGTaGAGCAACTACAATCACTGGGATTCATTCAACTTA +
Preference number: 6 (lower is better)
Translates to: QTTSVEQIGYFS*SNYNHWDSFNL
Trigger: TAAGTTGAATGAATCCCAGTGATTGTAGTTGCTTCACGAAAAATAACCAATTTGTTCTACAGAGGTAGTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568171.1
CDS TCA 72 bp AGTGACAAGACAATAGCCTTCTACTATTTTTGCTTATaGTTAGATAAATCACTGGTCTCTTTTCATGGCCTT +
Preference number: 6 (lower is better)
Translates to: SDKTIAFYYFCL*LDKSLVSFHGL
Trigger: AAGGCCATGAAAAGAGACCAGTGATTTATCTAATCATAAGCAAAAATAGTAGAAGGCTATTGTCTTGTCACT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568171.1
CDS TCA 72 bp AAGCAACTACAATCACTGGGATTCATTCAACTTAAGTaGCAAGACAATAGCCTTCTACTATTTTTGCTTATG +
Preference number: 6 (lower is better)
Translates to: KQLQSLGFIQLK*QDNSLLLFLLM
Trigger: CATAAGCAAAAATAGTAGAAGGCTATTGTCTTGTCACTTAAGTTGAATGAATCCCAGTGATTGTAGTTGCTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568171.1
CDS CAA 72 bp TATCTGAATGGGTTCTACTTGTTGAGGAGTTTGAGTTaGAATACCATATGTGTTCAGAAAAACTTGAAGTCT +
Preference number: 6 (lower is better)
Translates to: YLNGFYLLRSLS*NTICVQKNLKS
Trigger: AGACTTCAAGTTTTTCTGAACACATATGGTATTCAAACTCAAACTCCTCAACAAGTAGAACCCATTCAGATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000299167.12
ENST00000323584.10
ENST00000566044.5