RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHKA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000067177

Ensembl transcript IDs: ENST00000339490.7, ENST00000373539.3, ENST00000373542.9, ENST00000373545.7, ENST00000541944.5

Found 712 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTaGATTTTCTGCTGCAAATACAACTCTGAGTACCAACAATCTTTA +
Preference number: 1 (lower is better)
Translates to: LPLWNWAPGSISGLF*IFCCKYNSEYQQSL
Trigger: TAAAGATTGTTGGTACTCAGAGTTGTATTTGCAGCAGAAAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR GCA 90 bp TTACTGTGTGTTTCCATTTGCTCTGAGAGAAGTGCTGAAAAGGTTTaGTGTCCTCTCTTTGTTTCTACTATCTGTATTCTATCACCCTAC +
Preference number: 1 (lower is better)
Translates to: LLCVSICSERSAEKV*CPLFVSTICILSPY
Trigger: GTAGGGTGATAGAATACAGATAGTAGAAACAAAGAGAGGACAGCAAACCTTTTCAGCACTTCTCTCAGAGCAAATGGAAACACACAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR CCA 90 bp GACCAGGAGCACATGAAAAGAATGCTAAGTAGAGCACCTATAGACTaGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTA +
Preference number: 1 (lower is better)
Translates to: DQEHMKRMLSRAPID*TAVFIFAEYRRFKL
Trigger: TAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACTTAGCATTCTTTTCATGTGCTCCTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACTTTCCCTTCCTCTCTaGAATTGGGCTCCGGGCTCC +
Preference number: 2 (lower is better)
Translates to: LPPICVCQSESTVTSLLSLSLPL*NWAPGS
Trigger: GGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACTTCCTCTCTGGAATTaGGCTCCGGGCTCCATTTCT +
Preference number: 2 (lower is better)
Translates to: LPPICVCQSESTVTSLLSLPLWN*APGSIS
Trigger: AGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAGAGAGGCATTATGTGTaGAGACACAGAGAGGGCAAC +
Preference number: 2 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTERHYV*RHREGN
Trigger: GTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCAAAGTTCTCTCTTCTTaGGAAGGATGGGACAGAAAG +
Preference number: 2 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCKVLSS*EGWDRK
Trigger: CTTTCTGTCCCATCCTTCCCAAGAAGAGAGAACTTT...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTGATTGTCACTGGTTCTaGAAGGTGAGCCTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSDCHWF*KVSLQV
Trigger: TACCTGGAGGCTCACCTTGCAGAACCAGTGACAATC...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTAAAGTTCTCTCTTCTTaGGAAGGATGGGACAGAAAG +
Preference number: 2 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFKVLSS*EGWDRK
Trigger: CTTTCTGTCCCATCCTTCCCAAGAAGAGAGAACTTT...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAGAGTTTAAGAATAGATaGGGGGATAGGGTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTEFKNR*GDRVSG
Trigger: CCCTGACACCCTATCCCCCCATCTATTCTTAAACTC...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAGAGTTTAAGAATAGATaGGGGGATAGGGTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: NCSESLSSPPSPFPILGKEFKNR*GDRVSG
Trigger: CCCTGACACCCTATCCCCCCATCTATTCTTAAACTC...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAAAGGCTACCTACATATaGGATGAAGGAAGAGGACTG +
Preference number: 2 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTKATYI*DEGRGL
Trigger: CAGTCCTCTTCCTTCATCCCATATGTAGGTAGCCTT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAAACATTTTAGTTCCATaGACAATCAACCGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTNILVP*TINRGR
Trigger: CCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAAAAGTTCTCTCTTCTTaGGAAGGATGGGACAGAAAG +
Preference number: 2 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTKVLSS*EGWDRK
Trigger: CTTTCTGTCCCATCCTTCCCAAGAAGAGAGAACTTT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTCTTTCCCTTCCTCTCTaGAATTGGGCTCCGGGCTCC +
Preference number: 2 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTLSLPL*NWAPGS
Trigger: GGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAAAGGCTACCTACATATaGGATGAAGGAAGAGGACTG +
Preference number: 2 (lower is better)
Translates to: NCSESLSSPPSPFPILGKKATYI*DEGRGL
Trigger: CAGTCCTCTTCCTTCATCCCATATGTAGGTAGCCTT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR GCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAAACATTTTAGTTCCATaGACAATCAACCGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: NCSESLSSPPSPFPILGKNILVP*TINRGR
Trigger: CCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAGATTGTCACTGGTTCTaGAAGAATTGTTCAGAGAGT +
Preference number: 2 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTDCHWF*KNCSES
Trigger: ACTCTCTGAACAATTCTTGCAGAACCAGTGACAATC...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAAGTGCTGAAAAGGTTTaGTGTCCTCTCTTTGTTTCT +
Preference number: 2 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTSAEKV*CPLFVS
Trigger: AGAAACAAAGAGAGGACAGCAAACCTTTTCAGCACT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR TCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAAGGGTGTCAGGGAGTTaGGTTGGATGTAGTAGAAAG +
Preference number: 2 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRRVSGS*VGCSRK
Trigger: CTTTCTACTACATCCAACTCAACTCCCTGACACCCT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR TCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGACATGACAGGCCTGGCTaGGTGTTCATTATACTCATA +
Preference number: 2 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRHDRPG*VFIILI
Trigger: TATGAGTATAATGAACACTCAGCCAGGCCTGTCATG...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR TCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTGAACTAAGCCACCTCTaGTTCCCTCTCTGTTCCCTA +
Preference number: 2 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSELSHL*FPLCSL
Trigger: TAGGGAACAGAGAGGGAATCAGAGGTGGCTTAGTTC...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR GCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAGATTGTCACTGGTTCTaGAAGGTGAGCCTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLDCHWF*KVSLQV
Trigger: TACCTGGAGGCTCACCTTGCAGAACCAGTGACAATC...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR TCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAGATATTTCACCAAAGTaGGAGAGGCATTATGTGTGC +
Preference number: 2 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRDISPK*ERHYVC
Trigger: GCACACATAATGCCTCTCTCACTTTGGTGAAATATC...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR TCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTAGGGTGTCAGGGAGTTaGGTTGGATGTAGTAGAAAG +
Preference number: 2 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTRVSGS*VGCSRK
Trigger: CTTTCTACTACATCCAACTCAACTCCCTGACACCCT...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR GCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAAACATTTTAGTTCCATaGACAATCAACCGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRNILVP*TINRGR
Trigger: CCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTGAGTTTAAGAATAGATaGGGGGATAGGGTGTCAGGG +
Preference number: 2 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTEFKNR*GDRVSG
Trigger: CCCTGACACCCTATCCCCCCATCTATTCTTAAACTC...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACATGACAGGCCTGGCTaGGTGTTCATTATACTCATA +
Preference number: 2 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLHDRPG*VFIILI
Trigger: TATGAGTATAATGAACACTCAGCCAGGCCTGTCATG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR GCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCTGCATTTTCTGCTaGAAATACAACTCTGAGTAC +
Preference number: 2 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRFCIFC*KYNSEY
Trigger: GTACTCAGAGTTGTATTTGCAGCAGAAAATGCAGAA...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR CAA 90 bp CCATTTGCTCTGAGAGAAGTGCTGAAAAGGTTTGCTGTCCTCTCTTaGTTTCTACTATCTGTATTCTATCACCCTACTATATGCTTACTT +
Preference number: 2 (lower is better)
Translates to: PFALREVLKRFAVLS*FLLSVFYHPTICLL
Trigger: AAGTAAGCATATAGTAGGGTGATAGAATACAGATAGTAGAAACAAAGAGAGGACAGCAAACCTTTTCAGCACTTCTCTCAGAGCAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR TCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTGATATTTCACCAAAGTaGGAGAGGCATTATGTGTGC +
Preference number: 2 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSDISPK*ERHYVC
Trigger: GCACACATAATGCCTCTCTCACTTTGGTGAAATATC...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR GCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGATTCTGCATTTTCTGCTaGAAATACAACTCTGAGTAC +
Preference number: 2 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRFCIFC*KYNSEY
Trigger: GTACTCAGAGTTGTATTTGCAGCAGAAAATGCAGAA...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTAAAGTTCTCTCTTCTTaGGAAGGATGGGACAGAAAG +
Preference number: 2 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSKVLSS*EGWDRK
Trigger: CTTTCTGTCCCATCCTTCCCAAGAAGAGAGAACTTT...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR GCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTATTCTGCATTTTCTGCTaGAAATACAACTCTGAGTAC +
Preference number: 2 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLFCIFC*KYNSEY
Trigger: GTACTCAGAGTTGTATTTGCAGCAGAAAATGCAGAA...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR GCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTATTTCTGGGTTATTCTaGATTTTCTGCTGCAAATAC +
Preference number: 2 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSISGLF*IFCCKY
Trigger: GTATTTGCAGCAGAAAATGCAGAATAACCCAGAAAT...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACACCTTCCTCTCTGGAATaGGGCTCCGGGCTCCATTTC +
Preference number: 3 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTPSSLE*GSGLHF
Trigger: GAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGG...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACATGTCAGGGAGTTGAGTaGGATGTAGTAGAAAGTAGG +
Preference number: 3 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTCQGVE*DVVESR
Trigger: CCTACTTTCTACTACATCCAACTCAACTCCCTGACA...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CAA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTCCTTCCTCTCTGGAATaGGGCTCCGGGCTCCATTTC +
Preference number: 3 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTPSSLE*GSGLHF
Trigger: GAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGG...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CAA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACCTTCCTCTCTGGAATaGGGCTCCGGGCTCCATTTC +
Preference number: 3 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLPSSLE*GSGLHF
Trigger: GAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAACCTATGTATAAGACATaGTCCAGGCATCGTCTCTTC +
Preference number: 3 (lower is better)
Translates to: NCSESLSSPPSPFPILGKPMYKT*SRHRLF
Trigger: GAAGAGACGATGCCTGGACAATGTCTTATACATAGG...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACATGTCTGTGTTGTGTATaGGCCCATTTTTCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTCLCCV*AHFSKA
Trigger: TGCCTTTGAAAAATGGGCCAATACACAACACAGACA...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR TCA 72 bp GCAAGGCTACCTACATATGGGATGAAGGAAGAGGACTaGAGCTATTCTTCCACCAATCTGTGTGTGTCAATC +
Preference number: 3 (lower is better)
Translates to: ARLPTYGMKEED*SYSSTNLCVSI
Trigger: GATTGACACACACAGATTGGTGGAAGAATAGCTTCAGTCCTCTTCCTTCATCCCATATGTAGGTAGCCTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CAA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCCCTATGTATAAGACATaGTCCAGGCATCGTCTCTTC +
Preference number: 3 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRPMYKT*SRHRLF
Trigger: GAAGAGACGATGCCTGGACAATGTCTTATACATAGG...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAAGACGCTTCAAATTATaGTCTGTGTTGTGTATTGGC +
Preference number: 3 (lower is better)
Translates to: NCSESLSSPPSPFPILGKRRFKL*SVLCIG
Trigger: GCCAATACACAACACAGACAATAATTTGAAGCGTCT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CAA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTATGTCAGGGAGTTGAGTaGGATGTAGTAGAAAGTAGG +
Preference number: 3 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLCQGVE*DVVESR
Trigger: CCTACTTTCTACTACATCCAACTCAACTCCCTGACA...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CAA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTATGTCTGTGTTGTGTATaGGCCCATTTTTCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLCLCCV*AHFSKA
Trigger: TGCCTTTGAAAAATGGGCCAATACACAACACAGACA...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR TCA 72 bp AGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTaGATACAGACGCTTCAAATTATTGTCTGTGTTGTG +
Preference number: 3 (lower is better)
Translates to: STYRLDCCIYLC*IQTLQIIVCVV
Trigger: CACAACACAGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR-3UTR CAA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAAGACGCTTCAAATTATaGTCTGTGTTGTGTATTGGC +
Preference number: 3 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLRRFKL*SVLCIG
Trigger: GCCAATACACAACACAGACAATAATTTGAAGCGTCT...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAGCGCCGCCTCCACCTTaGGGGAGACGCGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTAPPPP*GRRERE
Trigger: CTCCCGCTCGCGTCTCCCGCAAGGTGGAGGCGGCGC...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373542.9
ENST00000373545.7
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACTCCTGCACGTAGGTaGCGGCTGCCTTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEATPARR*RLPWRG
Trigger: ACCTCTCCAAGGCAGCCGCCACCTACGTGCAGGAGT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAGCGCCGCCTCCACCTTaGGGGAGACGCGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKAPPPP*GRRERE
Trigger: CTCCCGCTCGCGTCTCCCGCAAGGTGGAGGCGGCGC...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373542.9
ENST00000373545.7
CDS-3UTR CCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCAAGGTGATGGTGGGCTaGCCTGTCATCCGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCKVMVG*PVIRQR
Trigger: CCGCTGGCGGATGACAGGCCAGCCCACCATCACCTT...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCAGGTCCAGGGTCCATaGAGCTCAAGTGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAQVQGP*SSSVCN
Trigger: GTTGCACACACTTGAGCTTCATGGACCCTGGACCTG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACAGGTCCAGGGTCCATaGAGCTCAAGTGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPQVQGP*SSSVCN
Trigger: GTTGCACACACTTGAGCTTCATGGACCCTGGACCTG...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCGGATCAGGCCCCAGTaGCGAATTTCTCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEARIRPQ*RISPTL
Trigger: CAAAGTGGGAGAAATTCGTCACTGGGGCCTGATCCG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCATCTATCAGCTGAGTaGGCGCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAHLSAE*APHRAE
Trigger: CTCTGCCCTATGAGGCGCTCACTCAGCTGATAGATG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATCATGGCCGAAGGACTaGGATTCATCAGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPSWPKD*DSSGPL
Trigger: CAGAGGGCCTGATGAATCTCAGTCCTTCGGCCATGA...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAGAGGTAGGTCATGGTaGCAAACCTGCCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPRGRSW*QTCHWV
Trigger: CACCCAGTGGCAGGTTTGGCACCATGACCTACCTCT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAAGGTGATGGTGGGCTaGCCTGTCATCCGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPKVMVG*PVIRQR
Trigger: CCGCTGGCGGATGACAGGCCAGCCCACCATCACCTT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGTTTGCACAGCAGCTTaGAACCGATCTAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAVCTAA*NRSSPP
Trigger: GGGAGGGCTAGATCGGTTCCAAGCTGCTGTGCAAAC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR CCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAGTTTGCACAGCAGCTTaGAACCGATCTAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPVCTAA*NRSSPP
Trigger: GGGAGGGCTAGATCGGTTCCAAGCTGCTGTGCAAAC...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR CCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATCATCAGGCCCTCTGTaGCTTCCTCAGCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPSSGPL*LPQLSI
Trigger: GATGCTCAGCTGAGGAAGCCACAGAGGGCCTGATGA...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCTCATCAGGCCCTCTGTaGCTTCCTCAGCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEASSGPL*LPQLSI
Trigger: GATGCTCAGCTGAGGAAGCCACAGAGGGCCTGATGA...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATGGAGAGGTAGGTCATaGTGCCAAACCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPWRGRS*CQTCHW
Trigger: CCAGTGGCAGGTTTGGCACCATGACCTACCTCTCCA...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCCAGTCACTGGATTCTaGTGGCACAGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAPVTGF*WHRMVC
Trigger: ACAGACCATCCTGTGCCATCAGAATCCAGTGACTGG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAGGGAGAGAAGGTCTGTaGAGGCCTCATCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPGREGL*RPHQVL
Trigger: AAGCACTTGATGAGGCCTGCACAGACCTTCTCTCCC...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATCATGGTGCCAAACCTaGCACTGGGTGCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPSWCQT*HWVHCH
Trigger: ATGACAGTGCACCCAGTGGCAGGTTTGGCACCATGA...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATTGCATGGCACAGATaGTGTGGGGCAGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAIAWHR*CGAGTP
Trigger: AGGAGTTCCTGCCCCACAGCATCTGTGCCATGCAAT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTCAGGTCAACGACCGCTaGGCCGCCTCCACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSQVNDR*AASTLR
Trigger: CCGCAAGGTGGAGGCGGCGCAGCGGTCGTTGACCTG...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373542.9
ENST00000373545.7
CDS-3UTR CCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACTTCCTCTCTGGAATTaGGCTCCGGGCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPLPLWN*APGSIS
Trigger: AGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAG...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGGGGATGACCACCATTaGACTGACTCTCAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAGDDHH*TDSQLR
Trigger: TCTCAGCTGAGAGTCAGTCCAATGGTGGTCATCCCC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373539.3
ENST00000373545.7
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGAGCTGGTTGTACTCTaGTGGGGTATACCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAELVVL*WGIPQQ
Trigger: TTGCTGAGGTATACCCCATCAGAGTACAACCAGCTC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAATCAAGCATGCTGTGTaGGATGGGGAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPIKHAV*DGEGDG
Trigger: ACCATCACCTTCCCCATCTCACACAGCATGCTTGAT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAGAAGGCCGGGAAGCCTaGAATAACTTCGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPEGREA*NNFVGR
Trigger: TCTTCCTACGAAGTTATTTCAGGCTTCCCGGCCTTC...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCAAACTCCTTGCCGCTaGGAATGTGATGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAQTPCR*ECDAGD
Trigger: ATCTCCTGCATCACATTCTCAGCGGCAAGGAGTTTG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAGCAGGACTGACATTTaGATCAGTGGGACGAACGCT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEASRTDI*ISGTNA
Trigger: AGCGTTCGTCCCACTGATTCAAATGTCAGTCCTGCT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCTATCTGCCAGCATGGTaGGGACAAGGATGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAYLPAW*GQGWLQ
Trigger: TTGAAGCCATCCTTGTCCTCACCATGCTGGCAGATA...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAGGATAGACTGGCAGTaGTGTACTTCATCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPRIDWQ*CTSSAR
Trigger: CCTGGCTGATGAAGTACAGCACTGCCAGTCTATCCT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCTGGCTATCCTCTACTaGAAAGGCAGGGAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEALAILY*KGREGN
Trigger: GTTTCCTTCCCTGCCTTTGCAGTAGAGGATAGCCAG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCACACGTAGGTGGCGGCTaGCTTGGAGAGGTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPHVGGG*LGEVGH
Trigger: ATGACCTACCTCTCCAAGGCAGCCGCCACCTACGTG...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAACCAAAGCCCTCATTaGATGGCACAGATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPNQSPH*MAQMLW
Trigger: CCACAGCATCTGTGCCATGCAATGAGGGCTTTGGTT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAGATTGTCACTGGTTCTaGAAGGTGAGCCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPDCHWF*KVSLQV
Trigger: TACCTGGAGGCTCACCTTGCAGAACCAGTGACAATC...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGTGAGCTCCACCAACTaGCTATCCTCTACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAVSSTN*LSSTAK
Trigger: CTTTGCAGTAGAGGATAGCCAGTTGGTGGAGCTCAC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCAGCTCTGGCAGAAGTaGGACTCCATTTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAQLWQK*DSIFAL
Trigger: AAGGGCAAAAATGGAGTCCCACTTCTGCCAGAGCTG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAAAGGTGATGGTGGGCTaGCCTGTCATCCGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTKVMVG*PVIRQR
Trigger: CCGCTGGCGGATGACAGGCCAGCCCACCATCACCTT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCGGGGCTAGTTTAGGATaGGGAGCAGTGTGCGCCAAA +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCGASLG*GAVCAK
Trigger: TTTGGCGCACACTGCTCCCCATCCTAAACTAGCCCC...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCTCATCAGGCCCTCTGTaGCTTCCTCAGCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCSSGPL*LPQLSI
Trigger: GATGCTCAGCTGAGGAAGCCACAGAGGGCCTGATGA...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAATGGCACAGATGCTGTaGGGCAGGAACTCCTGCACG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPMAQML*GRNSCT
Trigger: CGTGCAGGAGTTCCTGCCCCACAGCATCTGTGCCAT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTCTTTCCCTTCCTCTCTaGAATTGGGCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFLSLPL*NWAPGS
Trigger: GGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTCGGATCAGGCCCCAGTaGCGAATTTCTCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFRIRPQ*RISPTL
Trigger: CAAAGTGGGAGAAATTCGTCACTGGGGCCTGATCCG...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCACGGATCAGGCCCCAGTaGCGAATTTCTCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPRIRPQ*RISPTL
Trigger: CAAAGTGGGAGAAATTCGTCACTGGGGCCTGATCCG...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCACATCTATCAGCTGAGTaGGCGCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPHLSAE*APHRAE
Trigger: CTCTGCCCTATGAGGCGCTCACTCAGCTGATAGATG...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACATCTTCATCAAGCATaGTGTGTGAGATGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPHLHQA*CVRWGR
Trigger: CCTTCCCCATCTCACACAGCATGCTTGATGAAGATG...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCGGGAGAGAAGGTCTGTaGAGGCCTCATCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCGREGL*RPHQVL
Trigger: AAGCACTTGATGAGGCCTGCACAGACCTTCTCTCCC...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACTCATAGGGCAGAGGTaGAGAGATAGTCTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPLIGQR*RDSLFS
Trigger: CGAGAAAAGACTATCTCTGCACCTCTGCCCTATGAG...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAGATGCGGGATCCTTTaGCAACATGGTATCATCTGC +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPRCGIL*QHGIIC
Trigger: GCAGATGATACCATGTTGGCAAAGGATCCCGCATCT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAGTACAGATGCCAGATaGGGGATCCTTTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPSTDAR*GILCQH
Trigger: ATGTTGGCAAAGGATCCCGCATCTGGCATCTGTACT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAACCTGCCACTGGGTaGACTGTCATACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAKPATG*TVIQKS
Trigger: ACTCTTCTGTATGACAGTGCACCCAGTGGCAGGTTT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAAACCTGCCACTGGGTaGACTGTCATACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPKPATG*TVIQKS
Trigger: ACTCTTCTGTATGACAGTGCACCCAGTGGCAGGTTT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAGAGGTAGGTCATGGTaGCAAACCTGCCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPRGRSW*QTCHWV
Trigger: CACCCAGTGGCAGGTTTGGCACCATGACCTACCTCT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAGCAAGCCAGTCACTaGATTCTGATGGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAKQASH*ILMAQD
Trigger: ATCCTGTGCCATCAGAATCCAGTGACTGGCTTGCTT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAAGCAAGCCAGTCACTaGATTCTGATGGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPKQASH*ILMAQD
Trigger: ATCCTGTGCCATCAGAATCCAGTGACTGGCTTGCTT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAACACTGTACAGCTCTaGCAGAAGTGGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEANTVQL*QKWDSI
Trigger: AATGGAGTCCCACTTCTGCCAGAGCTGTACAGTGTT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAACACTGTACAGCTCTaGCAGAAGTGGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPNTVQL*QKWDSI
Trigger: AATGGAGTCCCACTTCTGCCAGAGCTGTACAGTGTT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGGGGCTAGTTTAGGATaGGGAGCAGTGTGCGCCAAA +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPGASLG*GAVCAK
Trigger: TTTGGCGCACACTGCTCCCCATCCTAAACTAGCCCC...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR CCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTGGGGCTAGTTTAGGATaGGGAGCAGTGTGCGCCAAA +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFGASLG*GAVCAK
Trigger: TTTGGCGCACACTGCTCCCCATCCTAAACTAGCCCC...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGCAGTTCCTTGGCCTTaGTCACCAAGGACATTAAGT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAAVPWP*SPRTLS
Trigger: ACTTAATGTCCTTGGTGACCAAGGCCAAGGAACTGC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAAGGACCCACTACTTaGAGTCATAGAGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAKGPTT*SHRGSR
Trigger: CCTGGAACCTCTATGACTCCAAGTAGTGGGTCCTTT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAAAGGACCCACTACTTaGAGTCATAGAGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPKGPTT*SHRGSR
Trigger: CCTGGAACCTCTATGACTCCAAGTAGTGGGTCCTTT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCCAGCTGACGGTACTCTaGCTGAGGTACACGATTCAG +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCQLTVL*LRYTIQ
Trigger: CTGAATCGTGTACCTCAGCCAGAGTACCGTCAGCTG...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCATGGAGAGGTAGGTCATaGTGCCAAACCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPWRGRS*CQTCHW
Trigger: CCAGTGGCAGGTTTGGCACCATGACCTACCTCTCCA...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATGTAGGGTCGTCCACTaGGTTTCATTCTATTGTTGC +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPCRVVH*VSFYCC
Trigger: GCAACAATAGAATGAAACTCAGTGGACGACCCTACA...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCTGTAGGGTCGTCCACTaGGTTTCATTCTATTGTTGC +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEACRVVH*VSFYCC
Trigger: GCAACAATAGAATGAAACTCAGTGGACGACCCTACA...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCATGACAGGCCTGGCTaGGTGTTCATTATACTCATA +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAHDRPG*VFIILI
Trigger: TATGAGTATAATGAACACTCAGCCAGGCCTGTCATG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCCAAAATACCCATCTTaGATTTTTCGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAPKYPS*IFRSAA
Trigger: GGCAGCACTCCGAAAAATGCAAGATGGGTATTTTGG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATCGTTCTGTTTTGGTTaGTCCAACAGCACCAATCTC +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPSFCFG*SNSTNL
Trigger: GAGATTGGTGCTGTTGGAGCAACCAAAACAGAACGA...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACACGTAGGTGGCGGCTaGCTTGGAGAGGTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSHVGGG*LGEVGH
Trigger: ATGACCTACCTCTCCAAGGCAGCCGCCACCTACGTG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAATTGCATGGCACAGATaGTGTGGGGCAGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPIAWHR*CGAGTP
Trigger: AGGAGTTCCTGCCCCACAGCATCTGTGCCATGCAAT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCGATTGTCACTGGTTCTaGAAGGTGAGCCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCDCHWF*KVSLQV
Trigger: TACCTGGAGGCTCACCTTGCAGAACCAGTGACAATC...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGGTATACCTCAGCAATaGTCTCCACGTAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAGIPQQ*SPRKFP
Trigger: AGGGAATTTACGTGGAGACCATTGCTGAGGTATACC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCAGTTCGTTCTGTTTTaGTTGCTCCAACAGCACCAA +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAQFVLF*LLQQHQ
Trigger: TTGGTGCTGTTGGAGCAACCAAAACAGAACGAACTG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCACAGCTGACGGTACTCTaGCTGAGGTACACGATTCAG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPQLTVL*LRYTIQ
Trigger: CTGAATCGTGTACCTCAGCCAGAGTACCGTCAGCTG...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTCAGCTGACGGTACTCTaGCTGAGGTACACGATTCAG +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFQLTVL*LRYTIQ
Trigger: CTGAATCGTGTACCTCAGCCAGAGTACCGTCAGCTG...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAATGGCACAGATGCTGTaGGGCAGGAACTCCTGCACG +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSMAQML*GRNSCT
Trigger: CGTGCAGGAGTTCCTGCCCCACAGCATCTGTGCCAT...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAAGGCTACCTACATATaGGATGAAGGAAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPKATYI*DEGRGL
Trigger: CAGTCCTCTTCCTTCATCCCATATGTAGGTAGCCTT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCACAGGACATGGATAACTaGTTGAGGCCCACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPQDMDN*LRPTFH
Trigger: GTGAAAGGTGGGCCTCAATCAGTTATCCATGTCCTG...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAGCCTCTTTATATTCTTaGACCTGTTCTGCATTGCCA +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPASLYS*TCSALP
Trigger: TGGCAATGCAGAACAGGTTCAAGAATATAAAGAGGC...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAGCTGGTTGTACTCTaGTGGGGTATACCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPELVVL*WGIPQQ
Trigger: TTGCTGAGGTATACCCCATCAGAGTACAACCAGCTC...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATGGAATAAATGTGGCTaGGAATACGAGCTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPWNKCG*EYELVV
Trigger: TACAACCAGCTCGTATTCTCAGCCACATTTATTCCA...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAATCAAGCATGCTGTGTaGGATGGGGAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPIKHAV*DGEGDG
Trigger: ACCATCACCTTCCCCATCTCACACAGCATGCTTGAT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTATCAAGCATGCTGTGTaGGATGGGGAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFIKHAV*DGEGDG
Trigger: ACCATCACCTTCCCCATCTCACACAGCATGCTTGAT...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACAGGTCCAGGGTCCATaGAGCTCAAGTGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSQVQGP*SSSVCN
Trigger: GTTGCACACACTTGAGCTTCATGGACCCTGGACCTG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGCGAGCATGACTGGTTaGATCATAATCATTCATCCA +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAASMTG*IIIIHP
Trigger: TGGATGAATGATTATGATTCAACCAGTCATGCTCGC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGGCCGGGAAGCCTaGAATAACTTCGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPEGREA*NNFVGR
Trigger: TCTTCCTACGAAGTTATTTCAGGCTTCCCGGCCTTC...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACACGGATCAGGCCCCAGTaGCGAATTTCTCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTRIRPQ*RISPTL
Trigger: CAAAGTGGGAGAAATTCGTCACTGGGGCCTGATCCG...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCATATCTGCCAGCATGGTaGGGACAAGGATGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPYLPAW*GQGWLQ
Trigger: TTGAAGCCATCCTTGTCCTCACCATGCTGGCAGATA...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAATGCTTCCGATGCTATaGATTTCAATATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPMLPML*ISISAS
Trigger: GCTGGCAGATATTGAAATTCATAGCATCGGAAGCAT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAGGGTTTTCTGTTCTTaGAGGAACAAGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPRVFCS*RNKSLA
Trigger: TGCCAATGACTTGTTCCTTCAAGAACAGAAAACCCT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGATATTTCACCAAAGTaGGAGAGGCATTATGTGTGC +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEADISPK*ERHYVC
Trigger: GCACACATAATGCCTCTCTCACTTTGGTGAAATATC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATGCCCACAGATACCATaGTATACAGGGATATGTACA +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPCPQIP*YTGICT
Trigger: TGTACATATCCCTGTATATCATGGTATCTGTGGGCA...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATGAAGGAAGAGGACTaGAGCTATTCTTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAMKEED*SYSSTN
Trigger: ATTGGTGGAAGAATAGCTTCAGTCCTCTTCCTTCAT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTAGGATAGACTGGCAGTaGTGTACTTCATCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFRIDWQ*CTSSAR
Trigger: CCTGGCTGATGAAGTACAGCACTGCCAGTCTATCCT...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCCTCATAGGGCAGAGGTaGAGAGATAGTCTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCLIGQR*RDSLFS
Trigger: CGAGAAAAGACTATCTCTGCACCTCTGCCCTATGAG...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCATGGAACTCTATTCAGTaGCCCATCCAGCCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPWNSIQ*PIQPSS
Trigger: CGAAGAAGGCTGGATGGGGCACTGAATAGAGTTCCA...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCACAGAAGAGTACAGATaGCAGATGCGGGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCTEEYR*QMRDPL
Trigger: CAAAGGATCCCGCATCTGGCATCTGTACTCTTCTGT...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCAAACCTGCCACTGGGTaGACTGTCATACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCKPATG*TVIQKS
Trigger: ACTCTTCTGTATGACAGTGCACCCAGTGGCAGGTTT...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTCACGTAGGTGGCGGCTaGCTTGGAGAGGTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSHVGGG*LGEVGH
Trigger: ATGACCTACCTCTCCAAGGCAGCCGCCACCTACGTG...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAGTAAACTCAGAGAAATaGAGCCCTTCGAGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPVNSEK*SPSSKF
Trigger: GAACTTACTCGAAGGGCTGCATTTCTCTGAGTTTAC...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACTGATAAAATCCAACTaGAACTCTATTCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPLIKSN*NSIQCP
Trigger: GGGGCACTGAATAGAGTTCCAGTTGGATTTTATCAG...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGATCCTTTGCCAACATaGTATCATCTGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPDPLPT*YHLRQG
Trigger: CCCTTGGCGCAGATGATACCATGTTGGCAAAGGATC...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCATGCCAAACCTGCCACTaGGTGCACTGTCATACAGAA +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPCQTCH*VHCHTE
Trigger: TTCTGTATGACAGTGCACCCAGTGGCAGGTTTGGCA...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCATGGAGAGGTAGGTCATaGTGCCAAACCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSWRGRS*CQTCHW
Trigger: CCAGTGGCAGGTTTGGCACCATGACCTACCTCTCCA...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCTTTCCCTTCCTCTCTaGAATTGGGCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLLSLPL*NWAPGS
Trigger: GGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCGAGTTTAAGAATAGATaGGGGGATAGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCEFKNR*GDRVSG
Trigger: CCCTGACACCCTATCCCCCCATCTATTCTTAAACTC...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACACCAGTCACTGGATTCTaGTGGCACAGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTPVTGF*WHRMVC
Trigger: ACAGACCATCCTGTGCCATCAGAATCCAGTGACTGG...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAATGTCATAGAGTTTTaGAGTTCCAAGCACTCCCAT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPNVIEF*SSKHSH
Trigger: ATGGGAGTGCTTGGAACTTCAAAACTCTATGACATT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGTAGGAAGATACATGTaGACATTCTGTACATGCAGT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAVGRYM*TFCTCS
Trigger: ACTGCATGTACAGAATGTTCACATGTATCTTCCTAC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR TCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCATCTATCAGCTGAGTaGGCGCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLHLSAE*APHRAE
Trigger: CTCTGCCCTATGAGGCGCTCACTCAGCTGATAGATG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCATGGCCGAAGGACTaGGATTCATCAGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLSWPKD*DSSGPL
Trigger: CAGAGGGCCTGATGAATCTCAGTCCTTCGGCCATGA...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACACTTTTTAACTGCATaGTCCCAGTTCGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPHFLTA*SQFVLF
Trigger: AAACAGAACGAACTGGGATCATGCAGTTAAAAAGTG...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATCTTTAGATGACTGCTaGTCATATGCACTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPSLDDC*SYALGK
Trigger: CTTTCCTAGTGCATATGATCAGCAGTCATCTAAAGA...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCTCTTTAGATGACTGCTaGTCATATGCACTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEASLDDC*SYALGK
Trigger: CTTTCCTAGTGCATATGATCAGCAGTCATCTAAAGA...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAACGACTATCTTTAGATaGCTGCTGATCATATGCACT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPTTIFR*LLIICT
Trigger: AGTGCATATGATCAGCAGTCATCTAAAGATAGTCGT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCCATGACAGGCCTGGCTaGGTGTTCATTATACTCATA +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCHDRPG*VFIILI
Trigger: TATGAGTATAATGAACACTCAGCCAGGCCTGTCATG...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAGGGTGTCAGGGAGTTaGGTTGGATGTAGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPRVSGS*VGCSRK
Trigger: CTTTCTACTACATCCAACTCAACTCCCTGACACCCT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCATTCTTGAACCTGTTCTaGATTGCCACTGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPFLNLF*IATEDP
Trigger: GGGGTCTTCAGTGGCAATGCAGAACAGGTTCAAGAA...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAACCTGTTTGAACCCTTaGCCCACCAAAATACCCATC +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPTCLNP*PTKIPI
Trigger: GATGGGTATTTTGGTGGGGCAAGGGTTCAAACAGGT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAGGGAGAGAAGGTCTGTaGAGGCCTCATCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTGREGL*RPHQVL
Trigger: AAGCACTTGATGAGGCCTGCACAGACCTTCTCTCCC...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCGTGGGCCAGTTCTGTTaGCATAACTTGTATGATCAG +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCVGQFC*HNLYDQ
Trigger: CTGATCATACAAGTTATGGCAACAGAACTGGCCCAC...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCTCGTTCTGTTTTGGTTaGTCCAACAGCACCAATCTC +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCSFCFG*SNSTNL
Trigger: GAGATTGGTGCTGTTGGAGCAACCAAAACAGAACGA...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAATGAATTTCAATATCTaGCAGCATGGTGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPMNFNI*QHGEDK
Trigger: CTTGTCCTCACCATGCTGGCAGATATTGAAATTCAT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAGTACAGATGCCAGATaGGGGATCCTTTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPSTDAR*GILCQH
Trigger: ATGTTGGCAAAGGATCCCGCATCTGGCATCTGTACT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTACAGAAGAGTACAGATaGCAGATGCGGGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFTEEYR*QMRDPL
Trigger: CAAAGGATCCCGCATCTGGCATCTGTACTCTTCTGT...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCATCATGGTGCCAAACCTaGCACTGGGTGCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSSWCQT*HWVHCH
Trigger: ATGACAGTGCACCCAGTGGCAGGTTTGGCACCATGA...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGAGAGGTAGGTCATGGTaGCAAACCTGCCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLRGRSW*QTCHWV
Trigger: CACCCAGTGGCAGGTTTGGCACCATGACCTACCTCT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTAGAGGTAGGTCATGGTaGCAAACCTGCCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSRGRSW*QTCHWV
Trigger: CACCCAGTGGCAGGTTTGGCACCATGACCTACCTCT...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAGATTGTCACTGGTTCTaGAAGAATTGTTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPDCHWF*KNCSES
Trigger: ACTCTCTGAACAATTCTTGCAGAACCAGTGACAATC...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACAGGTCAACGACCGCTaGGCCGCCTCCACCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLQVNDR*AASTLR
Trigger: CCGCAAGGTGGAGGCGGCGCAGCGGTCGTTGACCTG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373542.9
ENST00000373545.7
CDS-3UTR CCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAGTATGTCCAGAACAATaGCCATTCACACTCAATGTT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPVCPEQ*PFTLNV
Trigger: AACATTGAGTGTGAATGGCCATTGTTCTGGACATAC...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGTATGTCCAGAACAATaGCCATTCACACTCAATGTT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAVCPEQ*PFTLNV
Trigger: AACATTGAGTGTGAATGGCCATTGTTCTGGACATAC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTAACACTGTACAGCTCTaGCAGAAGTGGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFNTVQL*QKWDSI
Trigger: AATGGAGTCCCACTTCTGCCAGAGCTGTACAGTGTT...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAACACTGTACAGCTCTaGCAGAAGTGGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPNTVQL*QKWDSI
Trigger: AATGGAGTCCCACTTCTGCCAGAGCTGTACAGTGTT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCTGTTTCAGCTAGAATaGAGACTTGAACCACAACAT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEALFQLE*RLEPQH
Trigger: ATGTTGTGGTTCAAGTCTCCATTCTAGCTGAAACAG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGCTGAGAATACGAGCTaGTTGTACTCTGATGGGGTA +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPAENTS*LYSDGV
Trigger: TACCCCATCAGAGTACAACCAGCTCGTATTCTCAGC...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTGTCAAATGTTTCTGGTaGGAGAGAAGGTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFVKCFW*ERRSVQ
Trigger: CTGCACAGACCTTCTCTCCCACCAGAAACATTTGAC...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAATCATCAGGCCCTCTGTaGCTTCCTCAGCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKSSGPL*LPQLSI
Trigger: GATGCTCAGCTGAGGAAGCCACAGAGGGCCTGATGA...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTTCATCAGGCCCTCTGTaGCTTCCTCAGCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSSSGPL*LPQLSI
Trigger: GATGCTCAGCTGAGGAAGCCACAGAGGGCCTGATGA...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAAAGGACCCACTACTTaGAGTCATAGAGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPKGPTT*SHRGSR
Trigger: CCTGGAACCTCTATGACTCCAAGTAGTGGGTCCTTT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGAATTTAATCTCACCTaGAGTCATCTCTCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAEFNLT*SHLSSG
Trigger: ACCACTAGAGAGATGACTCCAGGTGAGATTAAATTC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCACTCCTGCACGTAGGTaGCGGCTGCCTTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRTPARR*RLPWRG
Trigger: ACCTCTCCAAGGCAGCCGCCACCTACGTGCAGGAGT...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAAAAGCCCTCATTGCATaGCACAGATGCTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSKALIA*HRCCGA
Trigger: TGCCCCACAGCATCTGTGCCATGCAATGAGGGCTTT...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAACCAGTCACTGGATTCTaGTGGCACAGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKPVTGF*WHRMVC
Trigger: ACAGACCATCCTGTGCCATCAGAATCCAGTGACTGG...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCTGGAATAAATGTGGCTaGGAATACGAGCTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCWNKCG*EYELVV
Trigger: TACAACCAGCTCGTATTCTCAGCCACATTTATTCCA...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCATGTAGGGTCGTCCACTaGGTTTCATTCTATTGTTGC +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPCRVVH*VSFYCC
Trigger: GCAACAATAGAATGAAACTCAGTGGACGACCCTACA...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAATCAAGCATGCTGTGTaGGATGGGGAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSIKHAV*DGEGDG
Trigger: ACCATCACCTTCCCCATCTCACACAGCATGCTTGAT...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAATCAAGCATGCTGTGTaGGATGGGGAAGGTGATGGT +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTIKHAV*DGEGDG
Trigger: ACCATCACCTTCCCCATCTCACACAGCATGCTTGAT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCATGCTGCCAGGATACTTaGATTCAAGCTTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPCCQDT*IQACSI
Trigger: GATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCA...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAGAAGGCCGGGAAGCCTaGAATAACTTCGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSEGREA*NNFVGR
Trigger: TCTTCCTACGAAGTTATTTCAGGCTTCCCGGCCTTC...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAGAAGGCCGGGAAGCCTaGAATAACTTCGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTEGREA*NNFVGR
Trigger: TCTTCCTACGAAGTTATTTCAGGCTTCCCGGCCTTC...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACACAAACTCCTTGCCGCTaGGAATGTGATGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTQTPCR*ECDAGD
Trigger: ATCTCCTGCATCACATTCTCAGCGGCAAGGAGTTTG...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAAGCAGGACTGACATTTaGATCAGTGGGACGAACGCT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSSRTDI*ISGTNA
Trigger: AGCGTTCGTCCCACTGATTCAAATGTCAGTCCTGCT...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCAGGGTTTTCTGTTCTTaGAGGAACAAGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCRVFCS*RNKSLA
Trigger: TGCCAATGACTTGTTCCTTCAAGAACAGAAAACCCT...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTCATGACAGGCCTGGCTaGGTGTTCATTATACTCATA +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFHDRPG*VFIILI
Trigger: TATGAGTATAATGAACACTCAGCCAGGCCTGTCATG...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACACTGGCTATCCTCTACTaGAAAGGCAGGGAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTLAILY*KGREGN
Trigger: GTTTCCTTCCCTGCCTTTGCAGTAGAGGATAGCCAG...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTGGGAGAGAAGGTCTGTaGAGGCCTCATCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSGREGL*RPHQVL
Trigger: AAGCACTTGATGAGGCCTGCACAGACCTTCTCTCCC...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGGGAGAGAAGGTCTGTaGAGGCCTCATCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLGREGL*RPHQVL
Trigger: AAGCACTTGATGAGGCCTGCACAGACCTTCTCTCCC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGTGGGCCAGTTCTGTTaGCATAACTTGTATGATCAG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPVGQFC*HNLYDQ
Trigger: CTGATCATACAAGTTATGGCAACAGAACTGGCCCAC...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATCTCACTTTTTAACTaGATGATCCCAGTTCGTTCT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAISLFN*MIPVRS
Trigger: AGAACGAACTGGGATCATGCAGTTAAAAAGTGAGAT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCATGGAACTCTATTCAGTaGCCCATCCAGCCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSWNSIQ*PIQPSS
Trigger: CGAAGAAGGCTGGATGGGGCACTGAATAGAGTTCCA...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCATGGTGCCAAACCTaGCACTGGGTGCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLSWCQT*HWVHCH
Trigger: ATGACAGTGCACCCAGTGGCAGGTTTGGCACCATGA...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGATTGCATGGCACAGATaGTGTGGGGCAGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLIAWHR*CGAGTP
Trigger: AGGAGTTCCTGCCCCACAGCATCTGTGCCATGCAAT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAAACCAAAGCCCTCATTaGATGGCACAGATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTNQSPH*MAQMLW
Trigger: CCACAGCATCTGTGCCATGCAATGAGGGCTTTGGTT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAGATTGTCACTGGTTCTaGAAGGTGAGCCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSDCHWF*KVSLQV
Trigger: TACCTGGAGGCTCACCTTGCAGAACCAGTGACAATC...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAGAGAGGCATTATGTGTaGAGACACAGAGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSERHYV*RHREGN
Trigger: GTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAGTGAGCTCCACCAACTaGCTATCCTCTACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSVSSTN*LSSTAK
Trigger: CTTTGCAGTAGAGGATAGCCAGTTGGTGGAGCTCAC...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACAGCTCTGGCAGAAGTaGGACTCCATTTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSQLWQK*DSIFAL
Trigger: AAGGGCAAAAATGGAGTCCCACTTCTGCCAGAGCTG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGAGCATCGAAGGGAGTaGGCCAGTTCTGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLEHRRE*ASSVAI
Trigger: TATGGCAACAGAACTGGCCCACTCCCTTCGATGCTC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAACAGCACCAATCTCGTaGATAGAAATAGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPTAPIS*IEIAGL
Trigger: CAGTCCTGCTATTTCTATCCACGAGATTGGTGCTGT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTACAGCACCAATCTCGTaGATAGAAATAGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFTAPIS*IEIAGL
Trigger: CAGTCCTGCTATTTCTATCCACGAGATTGGTGCTGT...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAACTCCTGCACGTAGGTaGCGGCTGCCTTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRTPARR*RLPWRG
Trigger: ACCTCTCCAAGGCAGCCGCCACCTACGTGCAGGAGT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCATGGCACAGATGCTGTaGGGCAGGAACTCCTGCACG +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRMAQML*GRNSCT
Trigger: CGTGCAGGAGTTCCTGCCCCACAGCATCTGTGCCAT...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTAAAGCCCTCATTGCATaGCACAGATGCTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSKALIA*HRCCGA
Trigger: TGCCCCACAGCATCTGTGCCATGCAATGAGGGCTTT...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGAAAGCCCTCATTGCATaGCACAGATGCTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLKALIA*HRCCGA
Trigger: TGCCCCACAGCATCTGTGCCATGCAATGAGGGCTTT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCCTTTCCCTTCCTCTCTaGAATTGGGCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRLSLPL*NWAPGS
Trigger: GGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTAAGGCTACCTACATATaGGATGAAGGAAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFKATYI*DEGRGL
Trigger: CAGTCCTCTTCCTTCATCCCATATGTAGGTAGCCTT...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAAGGCTACCTACATATaGGATGAAGGAAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPKATYI*DEGRGL
Trigger: CAGTCCTCTTCCTTCATCCCATATGTAGGTAGCCTT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCATGGATCTTTTGCCTGTaGCACTACAGATATACTCCC +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPWIFCL*HYRYTP
Trigger: GGGAGTATATCTGTAGTGCCACAGGCAAAAGATCCA...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTTGGATCTTTTGCCTGTaGCACTACAGATATACTCCC +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFWIFCL*HYRYTP
Trigger: GGGAGTATATCTGTAGTGCCACAGGCAAAAGATCCA...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAACATGGATAACTGATTaGGGCCCACCTTTCACACCA +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSTWITD*GPPFTP
Trigger: TGGTGTGAAAGGTGGGCCTCAATCAGTTATCCATGT...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTCAGGACATGGATAACTaGTTGAGGCCCACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSQDMDN*LRPTFH
Trigger: GTGAAAGGTGGGCCTCAATCAGTTATCCATGTCCTG...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAACAGGACATGGATAACTaGTTGAGGCCCACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKQDMDN*LRPTFH
Trigger: GTGAAAGGTGGGCCTCAATCAGTTATCCATGTCCTG...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCAGGACATGGATAACTaGTTGAGGCCCACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLQDMDN*LRPTFH
Trigger: GTGAAAGGTGGGCCTCAATCAGTTATCCATGTCCTG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTGCCTCTTTATATTCTTaGACCTGTTCTGCATTGCCA +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFASLYS*TCSALP
Trigger: TGGCAATGCAGAACAGGTTCAAGAATATAAAGAGGC...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGAGCTGGTTGTACTCTaGTGGGGTATACCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLELVVL*WGIPQQ
Trigger: TTGCTGAGGTATACCCCATCAGAGTACAACCAGCTC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAGAGCTGGTTGTACTCTaGTGGGGTATACCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKELVVL*WGIPQQ
Trigger: TTGCTGAGGTATACCCCATCAGAGTACAACCAGCTC...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCATGGAATAAATGTGGCTaGGAATACGAGCTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPWNKCG*EYELVV
Trigger: TACAACCAGCTCGTATTCTCAGCCACATTTATTCCA...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCCAGGTCCAGGGTCCATaGAGCTCAAGTGTGTGCAAC +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRQVQGP*SSSVCN
Trigger: GTTGCACACACTTGAGCTTCATGGACCCTGGACCTG...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTGCGAGCATGACTGGTTaGATCATAATCATTCATCCA +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFASMTG*IIIIHP
Trigger: TGGATGAATGATTATGATTCAACCAGTCATGCTCGC...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR TCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTCATGGCCGAAGGACTaGGATTCATCAGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRSWPKD*DSSGPL
Trigger: CAGAGGGCCTGATGAATCTCAGTCCTTCGGCCATGA...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCAAACTCCTTGCCGCTaGGAATGTGATGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLQTPCR*ECDAGD
Trigger: ATCTCCTGCATCACATTCTCAGCGGCAAGGAGTTTG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAAGCAGGACTGACATTTaGATCAGTGGGACGAACGCT +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKSRTDI*ISGTNA
Trigger: AGCGTTCGTCCCACTGATTCAAATGTCAGTCCTGCT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCTCTTTAGATGACTGCTaGTCATATGCACTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCSLDDC*SYALGK
Trigger: CTTTCCTAGTGCATATGATCAGCAGTCATCTAAAGA...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCACGACTATCTTTAGATaGCTGCTGATCATATGCACT +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCTTIFR*LLIICT
Trigger: AGTGCATATGATCAGCAGTCATCTAAAGATAGTCGT...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAATGCTTCCGATGCTATaGATTTCAATATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPMLPML*ISISAS
Trigger: GCTGGCAGATATTGAAATTCATAGCATCGGAAGCAT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGAACTAAGCCACCTCTaGTTCCCTCTCTGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLELSHL*FPLCSL
Trigger: TAGGGAACAGAGAGGGAATCAGAGGTGGCTTAGTTC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGAGGATAGACTGGCAGTaGTGTACTTCATCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLRIDWQ*CTSSAR
Trigger: CCTGGCTGATGAAGTACAGCACTGCCAGTCTATCCT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAACCTGTTTGAACCCTTaGCCCACCAAAATACCCATC +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTTCLNP*PTKIPI
Trigger: GATGGGTATTTTGGTGGGGCAAGGGTTCAAACAGGT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAAAGTCGCAGGTTGTTTaGACAGCAGCTTGGAACCGA +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKKSQVV*TAAWNR
Trigger: TCGGTTCCAAGCTGCTGTGCAAACAACCTGCGACTT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGAAGTCGCAGGTTGTTTaGACAGCAGCTTGGAACCGA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLKSQVV*TAAWNR
Trigger: TCGGTTCCAAGCTGCTGTGCAAACAACCTGCGACTT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR GCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACTCATAGGGCAGAGGTaGAGAGATAGTCTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSLIGQR*RDSLFS
Trigger: CGAGAAAAGACTATCTCTGCACCTCTGCCCTATGAG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTGGAACTCTATTCAGTaGCCCATCCAGCCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLWNSIQ*PIQPSS
Trigger: CGAAGAAGGCTGGATGGGGCACTGAATAGAGTTCCA...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATGAATTTCAATATCTaGCAGCATGGTGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCMNFNI*QHGEDK
Trigger: CTTGTCCTCACCATGCTGGCAGATATTGAAATTCAT...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAAGTACAGATGCCAGATaGGGGATCCTTTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSSTDAR*GILCQH
Trigger: ATGTTGGCAAAGGATCCCGCATCTGGCATCTGTACT...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAACATTTTAGTTCCATaGACAATCAACCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPNILVP*TINRGR
Trigger: CCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGATTGTCACTGGTTCTaGAAGGTGAGCCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLDCHWF*KVSLQV
Trigger: TACCTGGAGGCTCACCTTGCAGAACCAGTGACAATC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTGAGAGGCATTATGTGTaGAGACACAGAGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSERHYV*RHREGN
Trigger: GTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGAGAGGCATTATGTGTaGAGACACAGAGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLERHYV*RHREGN
Trigger: GTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATTTCTGGGTTATTCTaGATTTTCTGCTGCAAATAC +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAISGLF*IFCCKY
Trigger: GTATTTGCAGCAGAAAATGCAGAATAACCCAGAAAT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCAGTGCTGAAAAGGTTTaGTGTCCTCTCTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCSAEKV*CPLFVS
Trigger: AGAAACAAAGAGAGGACAGCAAACCTTTTCAGCACT...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAAGGAGTGGATCTTTTaGCTGTGGCACTACAGATAT +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPKEWIF*LWHYRY
Trigger: ATATCTGTAGTGCCACAGGCAAAAGATCCACTCCTT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCTACGAAATTCCACCTaGTTTATCTCACTTTTTAAC +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEALRNST*FISLFN
Trigger: GTTAAAAAGTGAGATAAAGCAGGTGGAATTTCGTAG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGTGAGCTCCACCAACTaGCTATCCTCTACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLVSSTN*LSSTAK
Trigger: CTTTGCAGTAGAGGATAGCCAGTTGGTGGAGCTCAC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCGTATGTCCAGAACAATaGCCATTCACACTCAATGTT +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCVCPEQ*PFTLNV
Trigger: AACATTGAGTGTGAATGGCCATTGTTCTGGACATAC...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCAGCTCTGGCAGAAGTaGGACTCCATTTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLQLWQK*DSIFAL
Trigger: AAGGGCAAAAATGGAGTCCCACTTCTGCCAGAGCTG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACTGGTCTATAAACTGTaGAGTGAAAGTAAAGATAGT +
Preference number: 4 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPLVYKL*SESKDS
Trigger: ACTATCTTTACTTTCACTCCACAGTTTATAGACCAG...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTAAGGTGATGGTGGGCTaGCCTGTCATCCGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSKVMVG*PVIRQR
Trigger: CCGCTGGCGGATGACAGGCCAGCCCACCATCACCTT...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGTACATGCAGTTCCTTaGCCTTGGTCACCAAGGACA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLVHAVP*PWSPRT
Trigger: TGTCCTTGGTGACCAAGGCCAAGGAACTGCATGTAC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR CCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTGTACATGCAGTTCCTTaGCCTTGGTCACCAAGGACA +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSVHAVP*PWSPRT
Trigger: TGTCCTTGGTGACCAAGGCCAAGGAACTGCATGTAC...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CCA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGGGTTCGCATATACATaGCTAGATATACCATTATTT +
Preference number: 4 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAGFAYT*LDIPLF
Trigger: AAATAATGGTATATCTAGCCATGTATATGCGAACCC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGATCCTTTGCCAACATaGTATCATCTGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLDPLPT*YHLRQG
Trigger: CCCTTGGCGCAGATGATACCATGTTGGCAAAGGATC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTGATCCTTTGCCAACATaGTATCATCTGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSDPLPT*YHLRQG
Trigger: CCCTTGGCGCAGATGATACCATGTTGGCAAAGGATC...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTTGCCAAACCTGCCACTaGGTGCACTGTCATACAGAA +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSCQTCH*VHCHTE
Trigger: TTCTGTATGACAGTGCACCCAGTGGCAGGTTTGGCA...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAATGCCAAACCTGCCACTaGGTGCACTGTCATACAGAA +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKCQTCH*VHCHTE
Trigger: TTCTGTATGACAGTGCACCCAGTGGCAGGTTTGGCA...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAAAGTTCTCTCTTCTTaGGAAGGATGGGACAGAAAG +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPKVLSS*EGWDRK
Trigger: CTTTCTGTCCCATCCTTCCCAAGAAGAGAGAACTTT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAACATGGATAACTGATTaGGGCCCACCTTTCACACCA +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKTWITD*GPPFTP
Trigger: TGGTGTGAAAGGTGGGCCTCAATCAGTTATCCATGT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGACATGGATAACTGATTaGGGCCCACCTTTCACACCA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLTWITD*GPPFTP
Trigger: TGGTGTGAAAGGTGGGCCTCAATCAGTTATCCATGT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACATGTAGGGTCGTCCACTaGGTTTCATTCTATTGTTGC +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTCRVVH*VSFYCC
Trigger: GCAACAATAGAATGAAACTCAGTGGACGACCCTACA...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTGTAGGAAGATACATGTaGACATTCTGTACATGCAGT +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFVGRYM*TFCTCS
Trigger: ACTGCATGTACAGAATGTTCACATGTATCTTCCTAC...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR TCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGACATCTATCAGCTGAGTaGGCGCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRHLSAE*APHRAE
Trigger: CTCTGCCCTATGAGGCGCTCACTCAGCTGATAGATG...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCACACTTTTTAACTGCATaGTCCCAGTTCGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPHFLTA*SQFVLF
Trigger: AAACAGAACGAACTGGGATCATGCAGTTAAAAAGTG...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAACGACTATCTTTAGATaGCTGCTGATCATATGCACT +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPTTIFR*LLIICT
Trigger: AGTGCATATGATCAGCAGTCATCTAAAGATAGTCGT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTAGGGTGTCAGGGAGTTaGGTTGGATGTAGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSRVSGS*VGCSRK
Trigger: CTTTCTACTACATCCAACTCAACTCCCTGACACCCT...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCATCTTCATCAAGCATaGTGTGTGAGATGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLHLHQA*CVRWGR
Trigger: CCTTCCCCATCTCACACAGCATGCTTGATGAAGATG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACATCGTTCTGTTTTGGTTaGTCCAACAGCACCAATCTC +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTSFCFG*SNSTNL
Trigger: GAGATTGGTGCTGTTGGAGCAACCAAAACAGAACGA...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGAGATGCGGGATCCTTTaGCAACATGGTATCATCTGC +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLRCGIL*QHGIIC
Trigger: GCAGATGATACCATGTTGGCAAAGGATCCCGCATCT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGACAGAAGAGTACAGATaGCAGATGCGGGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLTEEYR*QMRDPL
Trigger: CAAAGGATCCCGCATCTGGCATCTGTACTCTTCTGT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAACAGAAGAGTACAGATaGCAGATGCGGGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKTEEYR*QMRDPL
Trigger: CAAAGGATCCCGCATCTGGCATCTGTACTCTTCTGT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAAAACCTGCCACTGGGTaGACTGTCATACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKKPATG*TVIQKS
Trigger: ACTCTTCTGTATGACAGTGCACCCAGTGGCAGGTTT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGAAACCTGCCACTGGGTaGACTGTCATACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLKPATG*TVIQKS
Trigger: ACTCTTCTGTATGACAGTGCACCCAGTGGCAGGTTT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAAGAGGTAGGTCATGGTaGCAAACCTGCCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRRGRSW*QTCHWV
Trigger: CACCCAGTGGCAGGTTTGGCACCATGACCTACCTCT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCATTGCATGGCACAGATaGTGTGGGGCAGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRIAWHR*CGAGTP
Trigger: AGGAGTTCCTGCCCCACAGCATCTGTGCCATGCAAT...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCTTCTGCATTTTCTGCTaGAAATACAACTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCFCIFC*KYNSEY
Trigger: GTACTCAGAGTTGTATTTGCAGCAGAAAATGCAGAA...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTGATTGTCACTGGTTCTaGAAGAATTGTTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFDCHWF*KNCSES
Trigger: ACTCTCTGAACAATTCTTGCAGAACCAGTGACAATC...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAAAGCAAGCCAGTCACTaGATTCTGATGGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKKQASH*ILMAQD
Trigger: ATCCTGTGCCATCAGAATCCAGTGACTGGCTTGCTT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTAAGCAAGCCAGTCACTaGATTCTGATGGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSKQASH*ILMAQD
Trigger: ATCCTGTGCCATCAGAATCCAGTGACTGGCTTGCTT...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAATTTAGGATAGACTaGCAGTGCTGTACTTCATCA +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPEFRID*QCCTSS
Trigger: TGATGAAGTACAGCACTGCCAGTCTATCCTAAATTC...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTGAATTTAGGATAGACTaGCAGTGCTGTACTTCATCA +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFEFRID*QCCTSS
Trigger: TGATGAAGTACAGCACTGCCAGTCTATCCTAAATTC...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTCTGTTTCAGCTAGAATaGAGACTTGAACCACAACAT +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFLFQLE*RLEPQH
Trigger: ATGTTGTGGTTCAAGTCTCCATTCTAGCTGAAACAG...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAGGTATACCTCAGCAATaGTCTCCACGTAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTGIPQQ*SPRKFP
Trigger: AGGGAATTTACGTGGAGACCATTGCTGAGGTATACC...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGCTGAGAATACGAGCTaGTTGTACTCTGATGGGGTA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLAENTS*LYSDGV
Trigger: TACCCCATCAGAGTACAACCAGCTCGTATTCTCAGC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAGCTGAGAATACGAGCTaGTTGTACTCTGATGGGGTA +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKAENTS*LYSDGV
Trigger: TACCCCATCAGAGTACAACCAGCTCGTATTCTCAGC...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCACACAGCGAGCATGACTaGTTGAATCATAATCATTCA +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPHSEHD*LNHNHS
Trigger: TGAATGATTATGATTCAACCAGTCATGCTCGCTGTG...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR CCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTGCAGTTCCTTGGCCTTaGTCACCAAGGACATTAAGT +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSAVPWP*SPRTLS
Trigger: ACTTAATGTCCTTGGTGACCAAGGCCAAGGAACTGC...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGTCAAATGTTTCTGGTaGGAGAGAAGGTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLVKCFW*ERRSVQ
Trigger: CTGCACAGACCTTCTCTCCCACCAGAAACATTTGAC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACACTTTTCTCGAGGTTCTaGAGGAAGTCCTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTLFSRF*RKSYCQ
Trigger: TTGACAGTAGGACTTCCTCCAGAACCTCGAGAAAAG...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACAGTTCGTTCTGTTTTaGTTGCTCCAACAGCACCAA +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSQFVLF*LLQQHQ
Trigger: TTGGTGCTGTTGGAGCAACCAAAACAGAACGAACTG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAAAAGGACCCACTACTTaGAGTCATAGAGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKKGPTT*SHRGSR
Trigger: CCTGGAACCTCTATGACTCCAAGTAGTGGGTCCTTT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAATTTAATCTCACCTaGAGTCATCTCTCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPEFNLT*SHLSSG
Trigger: ACCACTAGAGAGATGACTCCAGGTGAGATTAAATTC...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGATGGAGAGGTAGGTCATaGTGCCAAACCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRWRGRS*CQTCHW
Trigger: CCAGTGGCAGGTTTGGCACCATGACCTACCTCTCCA...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTACTCCTGCACGTAGGTaGCGGCTGCCTTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTTPARR*RLPWRG
Trigger: ACCTCTCCAAGGCAGCCGCCACCTACGTGCAGGAGT...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCATGGATCTTTTGCCTGTaGCACTACAGATATACTCCC +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSWIFCL*HYRYTP
Trigger: GGGAGTATATCTGTAGTGCCACAGGCAAAAGATCCA...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAGCCTCTTTATATTCTTaGACCTGTTCTGCATTGCCA +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTASLYS*TCSALP
Trigger: TGGCAATGCAGAACAGGTTCAAGAATATAAAGAGGC...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAATGTAGGGTCGTCCACTaGGTTTCATTCTATTGTTGC +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKCRVVH*VSFYCC
Trigger: GCAACAATAGAATGAAACTCAGTGGACGACCCTACA...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTGCTGCCAGGATACTTaGATTCAAGCTTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLCCQDT*IQACSI
Trigger: GATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCA...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTTGCTGCCAGGATACTTaGATTCAAGCTTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSCCQDT*IQACSI
Trigger: GATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCA...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGACAATTTACCTGTTTaGACCCTTGCCCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLDNLPV*TLAPPK
Trigger: TTTTGGTGGGGCAAGGGTTCAAACAGGTAAATTGTC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTGACAATTTACCTGTTTaGACCCTTGCCCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSDNLPV*TLAPPK
Trigger: TTTTGGTGGGGCAAGGGTTCAAACAGGTAAATTGTC...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAGCGAGCATGACTGGTTaGATCATAATCATTCATCCA +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSASMTG*IIIIHP
Trigger: TGGATGAATGATTATGATTCAACCAGTCATGCTCGC...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR TCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTATCTGCCAGCATGGTaGGGACAAGGATGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRYLPAW*GQGWLQ
Trigger: TTGAAGCCATCCTTGTCCTCACCATGCTGGCAGATA...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAATGCTTCCGATGCTATaGATTTCAATATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTMLPML*ISISAS
Trigger: GCTGGCAGATATTGAAATTCATAGCATCGGAAGCAT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCGAACTAAGCCACCTCTaGTTCCCTCTCTGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRELSHL*FPLCSL
Trigger: TAGGGAACAGAGAGGGAATCAGAGGTGGCTTAGTTC...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCATGCCCACAGATACCATaGTATACAGGGATATGTACA +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSCPQIP*YTGICT
Trigger: TGTACATATCCCTGTATATCATGGTATCTGTGGGCA...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACATACAGATATACTCCCTaGGATTGGGGTACACTTACA +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTYRYTP*DWGTLT
Trigger: TGTAAGTGTACCCCAATCTCAGGGAGTATATCTGTA...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCAGGATAGACTGGCAGTaGTGTACTTCATCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRRIDWQ*CTSSAR
Trigger: CCTGGCTGATGAAGTACAGCACTGCCAGTCTATCCT...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCCAAAATACCCATCTTaGATTTTTCGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLPKYPS*IFRSAA
Trigger: GGCAGCACTCCGAAAAATGCAAGATGGGTATTTTGG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAACCAAAATACCCATCTTaGATTTTTCGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKPKYPS*IFRSAA
Trigger: GGCAGCACTCCGAAAAATGCAAGATGGGTATTTTGG...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTAATCATTCATCCAGTTaGCAGATTCCAGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFNHSSS*QIPGNH
Trigger: ATGATTACCTGGAATCTGGCAACTGGATGAATGATT...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAATCATTCATCCAGTTaGCAGATTCCAGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPNHSSS*QIPGNH
Trigger: ATGATTACCTGGAATCTGGCAACTGGATGAATGATT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAGTGGGCCAGTTCTGTTaGCATAACTTGTATGATCAG +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKVGQFC*HNLYDQ
Trigger: CTGATCATACAAGTTATGGCAACAGAACTGGCCCAC...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTGTGGGCCAGTTCTGTTaGCATAACTTGTATGATCAG +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSVGQFC*HNLYDQ
Trigger: CTGATCATACAAGTTATGGCAACAGAACTGGCCCAC...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCGTTCTGTTTTGGTTaGTCCAACAGCACCAATCTC +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLSFCFG*SNSTNL
Trigger: GAGATTGGTGCTGTTGGAGCAACCAAAACAGAACGA...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTCTGGGTTATTCTaGATTTTCTGCTGCAAATAC +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCISGLF*IFCCKY
Trigger: GTATTTGCAGCAGAAAATGCAGAATAACCCAGAAAT...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACTGTGTGTTTCCATTTaGTCTGAGAGAAGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSLCVSI*SERSAE
Trigger: TTCAGCACTTCTCTCAGAGCAAATGGAAACACACAG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAAAGGAGTGGATCTTTTaGCTGTGGCACTACAGATAT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSKEWIF*LWHYRY
Trigger: ATATCTGTAGTGCCACAGGCAAAAGATCCACTCCTT...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAGTAAACTCAGAGAAATaGAGCCCTTCGAGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTVNSEK*SPSSKF
Trigger: GAACTTACTCGAAGGGCTGCATTTCTCTGAGTTTAC...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGGTATACCTCAGCAATaGTCTCCACGTAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLGIPQQ*SPRKFP
Trigger: AGGGAATTTACGTGGAGACCATTGCTGAGGTATACC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCCTGGTCTATAAACTGTaGAGTGAAAGTAAAGATAGT +
Preference number: 4 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCLVYKL*SESKDS
Trigger: ACTATCTTTACTTTCACTCCACAGTTTATAGACCAG...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTCTTTTCTCGAGGTTCTaGAGGAAGTCCTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSLFSRF*RKSYCQ
Trigger: TTGACAGTAGGACTTCCTCCAGAACCTCGAGAAAAG...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCTTTTCTCGAGGTTCTaGAGGAAGTCCTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLLFSRF*RKSYCQ
Trigger: TTGACAGTAGGACTTCCTCCAGAACCTCGAGAAAAG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCATATCCCCTTCACTaGCTTCATCTATCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLSYPLH*LHLSAE
Trigger: CTCAGCTGATAGATGAAGCCAGTGAAGGGGATATGA...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAATCATATCCCCTTCACTaGCTTCATCTATCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKSYPLH*LHLSAE
Trigger: CTCAGCTGATAGATGAAGCCAGTGAAGGGGATATGA...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAGAGCATCGAAGGGAGTaGGCCAGTTCTGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVREHRRE*ASSVAI
Trigger: TATGGCAACAGAACTGGCCCACTCCCTTCGATGCTC...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGACAGCACCAATCTCGTaGATAGAAATAGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLTAPIS*IEIAGL
Trigger: CAGTCCTGCTATTTCTATCCACGAGATTGGTGCTGT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACTGATAAAATCCAACTaGAACTCTATTCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSLIKSN*NSIQCP
Trigger: GGGGCACTGAATAGAGTTCCAGTTGGATTTTATCAG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAATGGCACAGATGCTGTaGGGCAGGAACTCCTGCACG +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLMAQML*GRNSCT
Trigger: CGTGCAGGAGTTCCTGCCCCACAGCATCTGTGCCAT...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTATGGCACAGATGCTGTaGGGCAGGAACTCCTGCACG +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTMAQML*GRNSCT
Trigger: CGTGCAGGAGTTCCTGCCCCACAGCATCTGTGCCAT...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAAAAGCCCTCATTGCATaGCACAGATGCTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRKALIA*HRCCGA
Trigger: TGCCCCACAGCATCTGTGCCATGCAATGAGGGCTTT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTCTTTCCCTTCCTCTCTaGAATTGGGCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSLSLPL*NWAPGS
Trigger: GGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGACAGGACATGGATAACTaGTTGAGGCCCACCTTTCAC +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRQDMDN*LRPTFH
Trigger: GTGAAAGGTGGGCCTCAATCAGTTATCCATGTCCTG...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAGCCTCTTTATATTCTTaGACCTGTTCTGCATTGCCA +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKASLYS*TCSALP
Trigger: TGGCAATGCAGAACAGGTTCAAGAATATAAAGAGGC...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACGGATCAGGCCCCAGTaGCGAATTTCTCCCACTTTG +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLRIRPQ*RISPTL
Trigger: CAAAGTGGGAGAAATTCGTCACTGGGGCCTGATCCG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACATCTATCAGCTGAGTaGGCGCCTCATAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLHLSAE*APHRAE
Trigger: CTCTGCCCTATGAGGCGCTCACTCAGCTGATAGATG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTATCATGGCCGAAGGACTaGGATTCATCAGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLSWPKD*DSSGPL
Trigger: CAGAGGGCCTGATGAATCTCAGTCCTTCGGCCATGA...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAAGCAGGACTGACATTTaGATCAGTGGGACGAACGCT +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRSRTDI*ISGTNA
Trigger: AGCGTTCGTCCCACTGATTCAAATGTCAGTCCTGCT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACACACTTTTTAACTGCATaGTCCCAGTTCGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTHFLTA*SQFVLF
Trigger: AAACAGAACGAACTGGGATCATGCAGTTAAAAAGTG...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAACATAGAGGTTCCAGGTaGCTGCTTTATCTCACTTTT +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKHRGSR*LLYLTF
Trigger: AAAAGTGAGATAAAGCAGTCACCTGGAACCTCTATG...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAACGACTATCTTTAGATaGCTGCTGATCATATGCACT +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTTTIFR*LLIICT
Trigger: AGTGCATATGATCAGCAGTCATCTAAAGATAGTCGT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAACGACTATCTTTAGATaGCTGCTGATCATATGCACT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSTTIFR*LLIICT
Trigger: AGTGCATATGATCAGCAGTCATCTAAAGATAGTCGT...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAATGCTTCCGATGCTATaGATTTCAATATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKMLPML*ISISAS
Trigger: GCTGGCAGATATTGAAATTCATAGCATCGGAAGCAT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTAGGGTTTTCTGTTCTTaGAGGAACAAGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSRVFCS*RNKSLA
Trigger: TGCCAATGACTTGTTCCTTCAAGAACAGAAAACCCT...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTGATATTTCACCAAAGTaGGAGAGGCATTATGTGTGC +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSDISPK*ERHYVC
Trigger: GCACACATAATGCCTCTCTCACTTTGGTGAAATATC...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAGAACTAAGCCACCTCTaGTTCCCTCTCTGTTCCCTA +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRELSHL*FPLCSL
Trigger: TAGGGAACAGAGAGGGAATCAGAGGTGGCTTAGTTC...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGATGAAGGAAGAGGACTaGAGCTATTCTTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLMKEED*SYSSTN
Trigger: ATTGGTGGAAGAATAGCTTCAGTCCTCTTCCTTCAT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTACAGATATACTCCCTaGGATTGGGGTACACTTACA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLYRYTP*DWGTLT
Trigger: TGTAAGTGTACCCCAATCTCAGGGAGTATATCTGTA...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGACTGGCTATCCTCTACTaGAAAGGCAGGGAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRLAILY*KGREGN
Trigger: GTTTCCTTCCCTGCCTTTGCAGTAGAGGATAGCCAG...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCTTGAACCTGTTCTaGATTGCCACTGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRFLNLF*IATEDP
Trigger: GGGGTCTTCAGTGGCAATGCAGAACAGGTTCAAGAA...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCAGATGCGGGATCCTTTaGCAACATGGTATCATCTGC +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRRCGIL*QHGIIC
Trigger: GCAGATGATACCATGTTGGCAAAGGATCCCGCATCT...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAAACCAAAGCCCTCATTaGATGGCACAGATGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRNQSPH*MAQMLW
Trigger: CCACAGCATCTGTGCCATGCAATGAGGGCTTTGGTT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGAACATTTTAGTTCCATaGACAATCAACCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLNILVP*TINRGR
Trigger: CCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTAACATTTTAGTTCCATaGACAATCAACCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSNILVP*TINRGR
Trigger: CCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTT...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAAGTGCTGAAAAGGTTTaGTGTCCTCTCTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSSAEKV*CPLFVS
Trigger: AGAAACAAAGAGAGGACAGCAAACCTTTTCAGCACT...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAACTGTGTGTTTCCATTTaGTCTGAGAGAAGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKLCVSI*SERSAE
Trigger: TTCAGCACTTCTCTCAGAGCAAATGGAAACACACAG...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTCTGTGTGTTTCCATTTaGTCTGAGAGAAGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSLCVSI*SERSAE
Trigger: TTCAGCACTTCTCTCAGAGCAAATGGAAACACACAG...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAGAATTTAGGATAGACTaGCAGTGCTGTACTTCATCA +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSEFRID*QCCTSS
Trigger: TGATGAAGTACAGCACTGCCAGTCTATCCTAAATTC...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACTGTTTCAGCTAGAATaGAGACTTGAACCACAACAT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSLFQLE*RLEPQH
Trigger: ATGTTGTGGTTCAAGTCTCCATTCTAGCTGAAACAG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCGCTGAGAATACGAGCTaGTTGTACTCTGATGGGGTA +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRAENTS*LYSDGV
Trigger: TACCCCATCAGAGTACAACCAGCTCGTATTCTCAGC...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCACTGGTCTATAAACTGTaGAGTGAAAGTAAAGATAGT +
Preference number: 4 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPLVYKL*SESKDS
Trigger: ACTATCTTTACTTTCACTCCACAGTTTATAGACCAG...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTCTGATAAAATCCAACTaGAACTCTATTCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSLIKSN*NSIQCP
Trigger: GGGGCACTGAATAGAGTTCCAGTTGGATTTTATCAG...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAACTGATAAAATCCAACTaGAACTCTATTCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKLIKSN*NSIQCP
Trigger: GGGGCACTGAATAGAGTTCCAGTTGGATTTTATCAG...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGATGCCAAACCTGCCACTaGGTGCACTGTCATACAGAA +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRCQTCH*VHCHTE
Trigger: TTCTGTATGACAGTGCACCCAGTGGCAGGTTTGGCA...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTTGGAGAGGTAGGTCATaGTGCCAAACCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSWRGRS*CQTCHW
Trigger: CCAGTGGCAGGTTTGGCACCATGACCTACCTCTCCA...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTCCAGTCACTGGATTCTaGTGGCACAGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTPVTGF*WHRMVC
Trigger: ACAGACCATCCTGTGCCATCAGAATCCAGTGACTGG...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTCCAGTCACTGGATTCTaGTGGCACAGGATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSPVTGF*WHRMVC
Trigger: ACAGACCATCCTGTGCCATCAGAATCCAGTGACTGG...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGAATGTCATAGAGTTTTaGAGTTCCAAGCACTCCCAT +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLNVIEF*SSKHSH
Trigger: ATGGGAGTGCTTGGAACTTCAAAACTCTATGACATT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTAATGTCATAGAGTTTTaGAGTTCCAAGCACTCCCAT +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSNVIEF*SSKHSH
Trigger: ATGGGAGTGCTTGGAACTTCAAAACTCTATGACATT...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCGACAATTTACCTGTTTaGACCCTTGCCCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRDNLPV*TLAPPK
Trigger: TTTTGGTGGGGCAAGGGTTCAAACAGGTAAATTGTC...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAACACTTTTTAACTGCATaGTCCCAGTTCGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKHFLTA*SQFVLF
Trigger: AAACAGAACGAACTGGGATCATGCAGTTAAAAAGTG...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAGAGGTTCCAGGTGACTaGCTCTCAGCTGAGATTGAC +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLEVPGD*LSAEID
Trigger: GTCAATCTCAGCTGAGAGTCAGTCACCTGGAACCTC...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373542.9
CDS-3UTR GCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGATTCTTGAACCTGTTCTaGATTGCCACTGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRFLNLF*IATEDP
Trigger: GGGGTCTTCAGTGGCAATGCAGAACAGGTTCAAGAA...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGACATCTTCATCAAGCATaGTGTGTGAGATGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRHLHQA*CVRWGR
Trigger: CCTTCCCCATCTCACACAGCATGCTTGATGAAGATG...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAACCTGTTTGAACCCTTaGCCCACCAAAATACCCATC +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRTCLNP*PTKIPI
Trigger: GATGGGTATTTTGGTGGGGCAAGGGTTCAAACAGGT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAAATCATTCATCCAGTTaGCAGATTCCAGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTNHSSS*QIPGNH
Trigger: ATGATTACCTGGAATCTGGCAACTGGATGAATGATT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAAATCATTCATCCAGTTaGCAGATTCCAGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSNHSSS*QIPGNH
Trigger: ATGATTACCTGGAATCTGGCAACTGGATGAATGATT...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGACTCATAGGGCAGAGGTaGAGAGATAGTCTTTTCTCG +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRLIGQR*RDSLFS
Trigger: CGAGAAAAGACTATCTCTGCACCTCTGCCCTATGAG...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCGTGGGCCAGTTCTGTTaGCATAACTTGTATGATCAG +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRVGQFC*HNLYDQ
Trigger: CTGATCATACAAGTTATGGCAACAGAACTGGCCCAC...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAATCTCACTTTTTAACTaGATGATCCCAGTTCGTTCT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSISLFN*MIPVRS
Trigger: AGAACGAACTGGGATCATGCAGTTAAAAAGTGAGAT...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAATCTCACTTTTTAACTaGATGATCCCAGTTCGTTCT +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTISLFN*MIPVRS
Trigger: AGAACGAACTGGGATCATGCAGTTAAAAAGTGAGAT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAGAGGTTCCAGGTGACTaGTTTATCTCACTTTTTAAC +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKEVPGD*FISLFN
Trigger: GTTAAAAAGTGAGATAAAGCAGTCACCTGGAACCTC...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAATGAATTTCAATATCTaGCAGCATGGTGAGGACAAG +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKMNFNI*QHGEDK
Trigger: CTTGTCCTCACCATGCTGGCAGATATTGAAATTCAT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAAGATGCGGGATCCTTTaGCAACATGGTATCATCTGC +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRRCGIL*QHGIIC
Trigger: GCAGATGATACCATGTTGGCAAAGGATCCCGCATCT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAACAGAAGAGTACAGATaGCAGATGCGGGATCCTTTG +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRTEEYR*QMRDPL
Trigger: CAAAGGATCCCGCATCTGGCATCTGTACTCTTCTGT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTTCATGGTGCCAAACCTaGCACTGGGTGCACTGTCAT +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTSWCQT*HWVHCH
Trigger: ATGACAGTGCACCCAGTGGCAGGTTTGGCACCATGA...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTATTGCATGGCACAGATaGTGTGGGGCAGGAACTCCT +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSIAWHR*CGAGTP
Trigger: AGGAGTTCCTGCCCCACAGCATCTGTGCCATGCAAT...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTGATTGTCACTGGTTCTaGAAGAATTGTTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSDCHWF*KNCSES
Trigger: ACTCTCTGAACAATTCTTGCAGAACCAGTGACAATC...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTAGTGCTGAAAAGGTTTaGTGTCCTCTCTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSSAEKV*CPLFVS
Trigger: AGAAACAAAGAGAGGACAGCAAACCTTTTCAGCACT...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAAAGCAAGCCAGTCACTaGATTCTGATGGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRKQASH*ILMAQD
Trigger: ATCCTGTGCCATCAGAATCCAGTGACTGGCTTGCTT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGAATTTAGGATAGACTaGCAGTGCTGTACTTCATCA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLEFRID*QCCTSS
Trigger: TGATGAAGTACAGCACTGCCAGTCTATCCTAAATTC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGTATGTCCAGAACAATaGCCATTCACACTCAATGTT +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLVCPEQ*PFTLNV
Trigger: AACATTGAGTGTGAATGGCCATTGTTCTGGACATAC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAAACACTGTACAGCTCTaGCAGAAGTGGGACTCCATT +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRNTVQL*QKWDSI
Trigger: AATGGAGTCCCACTTCTGCCAGAGCTGTACAGTGTT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTCTGTTTCAGCTAGAATaGAGACTTGAACCACAACAT +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSLFQLE*RLEPQH
Trigger: ATGTTGTGGTTCAAGTCTCCATTCTAGCTGAAACAG...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCGGTATACCTCAGCAATaGTCTCCACGTAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRGIPQQ*SPRKFP
Trigger: AGGGAATTTACGTGGAGACCATTGCTGAGGTATACC...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCACAGCGAGCATGACTaGTTGAATCATAATCATTCA +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLHSEHD*LNHNHS
Trigger: TGAATGATTATGATTCAACCAGTCATGCTCGCTGTG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR CCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCCTTTTCTCGAGGTTCTaGAGGAAGTCCTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRLFSRF*RKSYCQ
Trigger: TTGACAGTAGGACTTCCTCCAGAACCTCGAGAAAAG...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTCATATCCCCTTCACTaGCTTCATCTATCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRSYPLH*LHLSAE
Trigger: CTCAGCTGATAGATGAAGCCAGTGAAGGGGATATGA...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAGAGCATCGAAGGGAGTaGGCCAGTTCTGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLEHRRE*ASSVAI
Trigger: TATGGCAACAGAACTGGCCCACTCCCTTCGATGCTC...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCCAGTTCGTTCTGTTTTaGTTGCTCCAACAGCACCAA +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRQFVLF*LLQQHQ
Trigger: TTGGTGCTGTTGGAGCAACCAAAACAGAACGAACTG...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTCAGCTGACGGTACTCTaGCTGAGGTACACGATTCAG +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSQLTVL*LRYTIQ
Trigger: CTGAATCGTGTACCTCAGCCAGAGTACCGTCAGCTG...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACAGCTGACGGTACTCTaGCTGAGGTACACGATTCAG +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLQLTVL*LRYTIQ
Trigger: CTGAATCGTGTACCTCAGCCAGAGTACCGTCAGCTG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACTTCCTCTCTGGAATTaGGCTCCGGGCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLLPLWN*APGSIS
Trigger: AGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTCTTCCTCTCTGGAATTaGGCTCCGGGCTCCATTTCT +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTLPLWN*APGSIS
Trigger: AGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAG...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAGAGTTTAAGAATAGATaGGGGGATAGGGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVREFKNR*GDRVSG
Trigger: CCCTGACACCCTATCCCCCCATCTATTCTTAAACTC...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTGAGCTGGTTGTACTCTaGTGGGGTATACCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSELVVL*WGIPQQ
Trigger: TTGCTGAGGTATACCCCATCAGAGTACAACCAGCTC...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACAAACTCCTTGCCGCTaGGAATGTGATGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLQTPCR*ECDAGD
Trigger: ATCTCCTGCATCACATTCTCAGCGGCAAGGAGTTTG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTCAAACTCCTTGCCGCTaGGAATGTGATGCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTQTPCR*ECDAGD
Trigger: ATCTCCTGCATCACATTCTCAGCGGCAAGGAGTTTG...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAAGCAGGACTGACATTTaGATCAGTGGGACGAACGCT +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLSRTDI*ISGTNA
Trigger: AGCGTTCGTCCCACTGATTCAAATGTCAGTCCTGCT...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTTATCTGCCAGCATGGTaGGGACAAGGATGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTYLPAW*GQGWLQ
Trigger: TTGAAGCCATCCTTGTCCTCACCATGCTGGCAGATA...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCGATATTTCACCAAAGTaGGAGAGGCATTATGTGTGC +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRDISPK*ERHYVC
Trigger: GCACACATAATGCCTCTCTCACTTTGGTGAAATATC...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAAGGATAGACTGGCAGTaGTGTACTTCATCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLRIDWQ*CTSSAR
Trigger: CCTGGCTGATGAAGTACAGCACTGCCAGTCTATCCT...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTCTGGCTATCCTCTACTaGAAAGGCAGGGAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTLAILY*KGREGN
Trigger: GTTTCCTTCCCTGCCTTTGCAGTAGAGGATAGCCAG...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGAATCATTCATCCAGTTaGCAGATTCCAGGTAATCAT +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLNHSSS*QIPGNH
Trigger: ATGATTACCTGGAATCTGGCAACTGGATGAATGATT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTTGGAACTCTATTCAGTaGCCCATCCAGCCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSWNSIQ*PIQPSS
Trigger: CGAAGAAGGCTGGATGGGGCACTGAATAGAGTTCCA...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTGAGAGGCATTATGTGTaGAGACACAGAGAGGGCAAC +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTERHYV*RHREGN
Trigger: GTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTTTCTGCATTTTCTGCTaGAAATACAACTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSFCIFC*KYNSEY
Trigger: GTACTCAGAGTTGTATTTGCAGCAGAAAATGCAGAA...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAGTGAGCTCCACCAACTaGCTATCCTCTACTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLVSSTN*LSSTAK
Trigger: CTTTGCAGTAGAGGATAGCCAGTTGGTGGAGCTCAC...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTCAGCTCTGGCAGAAGTaGGACTCCATTTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSQLWQK*DSIFAL
Trigger: AAGGGCAAAAATGGAGTCCCACTTCTGCCAGAGCTG...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACACTGGTCTATAAACTGTaGAGTGAAAGTAAAGATAGT +
Preference number: 4 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTLVYKL*SESKDS
Trigger: ACTATCTTTACTTTCACTCCACAGTTTATAGACCAG...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAGTACATGCAGTTCCTTaGCCTTGGTCACCAAGGACA +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLVHAVP*PWSPRT
Trigger: TGTCCTTGGTGACCAAGGCCAAGGAACTGCATGTAC...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CCA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAGGGTTCGCATATACATaGCTAGATATACCATTATTT +
Preference number: 4 (lower is better)
Translates to: LPPICVCQSESTVTSLLSGFAYT*LDIPLF
Trigger: AAATAATGGTATATCTAGCCATGTATATGCGAACCC...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTGATCCTTTGCCAACATaGTATCATCTGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTDPLPT*YHLRQG
Trigger: CCCTTGGCGCAGATGATACCATGTTGGCAAAGGATC...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGATGGATCTTTTGCCTGTaGCACTACAGATATACTCCC +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRWIFCL*HYRYTP
Trigger: GGGAGTATATCTGTAGTGCCACAGGCAAAAGATCCA...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTACATGGATAACTGATTaGGGCCCACCTTTCACACCA +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSTWITD*GPPFTP
Trigger: TGGTGTGAAAGGTGGGCCTCAATCAGTTATCCATGT...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAGCCTCTTTATATTCTTaGACCTGTTCTGCATTGCCA +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRASLYS*TCSALP
Trigger: TGGCAATGCAGAACAGGTTCAAGAATATAAAGAGGC...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGACATAGAGGTTCCAGGTaGCTGCTTTATCTCACTTTT +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRHRGSR*LLYLTF
Trigger: AAAAGTGAGATAAAGCAGTCACCTGGAACCTCTATG...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAAGGGTTTTCTGTTCTTaGAGGAACAAGTCATTGGCA +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRRVFCS*RNKSLA
Trigger: TGCCAATGACTTGTTCCTTCAAGAACAGAAAACCCT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAAGGGTGTCAGGGAGTTaGGTTGGATGTAGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLRVSGS*VGCSRK
Trigger: CTTTCTACTACATCCAACTCAACTCCCTGACACCCT...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTTTCTTGAACCTGTTCTaGATTGCCACTGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTFLNLF*IATEDP
Trigger: GGGGTCTTCAGTGGCAATGCAGAACAGGTTCAAGAA...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTACCTGTTTGAACCCTTaGCCCACCAAAATACCCATC +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTTCLNP*PTKIPI
Trigger: GATGGGTATTTTGGTGGGGCAAGGGTTCAAACAGGT...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAAGATGCGGGATCCTTTaGCAACATGGTATCATCTGC +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLRCGIL*QHGIIC
Trigger: GCAGATGATACCATGTTGGCAAAGGATCCCGCATCT...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAAGTACAGATGCCAGATaGGGGATCCTTTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLSTDAR*GILCQH
Trigger: ATGTTGGCAAAGGATCCCGCATCTGGCATCTGTACT...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGATTTCTGGGTTATTCTaGATTTTCTGCTGCAAATAC +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLISGLF*IFCCKY
Trigger: GTATTTGCAGCAGAAAATGCAGAATAACCCAGAAAT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTATTTCTGGGTTATTCTaGATTTTCTGCTGCAAATAC +
Preference number: 4 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSISGLF*IFCCKY
Trigger: GTATTTGCAGCAGAAAATGCAGAATAACCCAGAAAT...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCTACGAAATTCCACCTaGTTTATCTCACTTTTTAAC +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLLRNST*FISLFN
Trigger: GTTAAAAAGTGAGATAAAGCAGGTGGAATTTCGTAG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
CDS-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTGCTGAGAATACGAGCTaGTTGTACTCTGATGGGGTA +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSAENTS*LYSDGV
Trigger: TACCCCATCAGAGTACAACCAGCTCGTATTCTCAGC...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTGCAGTTCCTTGGCCTTaGTCACCAAGGACATTAAGT +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTAVPWP*SPRTLS
Trigger: ACTTAATGTCCTTGGTGACCAAGGCCAAGGAACTGC...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CCA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAGGGTTCGCATATACATaGCTAGATATACCATTATTT +
Preference number: 4 (lower is better)
Translates to: NCSESLSSPPSPFPILGKGFAYT*LDIPLF
Trigger: AAATAATGGTATATCTAGCCATGTATATGCGAACCC...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGGGTTCGCATATACATaGCTAGATATACCATTATTT +
Preference number: 4 (lower is better)
Translates to: LGNNILVPCTINRGRDQLGFAYT*LDIPLF
Trigger: AAATAATGGTATATCTAGCCATGTATATGCGAACCC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTAAAGGACCCACTACTTaGAGTCATAGAGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSKGPTT*SHRGSR
Trigger: CCTGGAACCTCTATGACTCCAAGTAGTGGGTCCTTT...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGACTGATAAAATCCAACTaGAACTCTATTCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRLIKSN*NSIQCP
Trigger: GGGGCACTGAATAGAGTTCCAGTTGGATTTTATCAG...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCGAATTTAATCTCACCTaGAGTCATCTCTCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRREFNLT*SHLSSG
Trigger: ACCACTAGAGAGATGACTCCAGGTGAGATTAAATTC...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTATGCTGCCAGGATACTTaGATTCAAGCTTGTTCCATC +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLCCQDT*IQACSI
Trigger: GATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCA...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAGACAATTTACCTGTTTaGACCCTTGCCCCACCAAAA +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLDNLPV*TLAPPK
Trigger: TTTTGGTGGGGCAAGGGTTCAAACAGGTAAATTGTC...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGATCTTTAGATGACTGCTaGTCATATGCACTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRSLDDC*SYALGK
Trigger: CTTTCCTAGTGCATATGATCAGCAGTCATCTAAAGA...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACCAAAATACCCATCTTaGATTTTTCGGAGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLPKYPS*IFRSAA
Trigger: GGCAGCACTCCGAAAAATGCAAGATGGGTATTTTGG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTTCGTTCTGTTTTGGTTaGTCCAACAGCACCAATCTC +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSSFCFG*SNSTNL
Trigger: GAGATTGGTGCTGTTGGAGCAACCAAAACAGAACGA...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCATCTCACTTTTTAACTaGATGATCCCAGTTCGTTCT +
Preference number: 4 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRISLFN*MIPVRS
Trigger: AGAACGAACTGGGATCATGCAGTTAAAAAGTGAGAT...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTGGTATACCTCAGCAATaGTCTCCACGTAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSGIPQQ*SPRKFP
Trigger: AGGGAATTTACGTGGAGACCATTGCTGAGGTATACC...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGACACAGCGAGCATGACTaGTTGAATCATAATCATTCA +
Preference number: 4 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRHSEHD*LNHNHS
Trigger: TGAATGATTATGATTCAACCAGTCATGCTCGCTGTG...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTCTTTTCTCGAGGTTCTaGAGGAAGTCCTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSLFSRF*RKSYCQ
Trigger: TTGACAGTAGGACTTCCTCCAGAACCTCGAGAAAAG...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTTCATATCCCCTTCACTaGCTTCATCTATCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTSYPLH*LHLSAE
Trigger: CTCAGCTGATAGATGAAGCCAGTGAAGGGGATATGA...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTACAGCACCAATCTCGTaGATAGAAATAGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSTAPIS*IEIAGL
Trigger: CAGTCCTGCTATTTCTATCCACGAGATTGGTGCTGT...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTCAGTTCGTTCTGTTTTaGTTGCTCCAACAGCACCAA +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSQFVLF*LLQQHQ
Trigger: TTGGTGCTGTTGGAGCAACCAAAACAGAACGAACTG...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTTGGAATAAATGTGGCTaGGAATACGAGCTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTWNKCG*EYELVV
Trigger: TACAACCAGCTCGTATTCTCAGCCACATTTATTCCA...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTTGGAATAAATGTGGCTaGGAATACGAGCTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSWNKCG*EYELVV
Trigger: TACAACCAGCTCGTATTCTCAGCCACATTTATTCCA...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAGATATTTCACCAAAGTaGGAGAGGCATTATGTGTGC +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLDISPK*ERHYVC
Trigger: GCACACATAATGCCTCTCTCACTTTGGTGAAATATC...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTTGCCCACAGATACCATaGTATACAGGGATATGTACA +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTCPQIP*YTGICT
Trigger: TGTACATATCCCTGTATATCATGGTATCTGTGGGCA...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTATGAAGGAAGAGGACTaGAGCTATTCTTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTMKEED*SYSSTN
Trigger: ATTGGTGGAAGAATAGCTTCAGTCCTCTTCCTTCAT...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTATACAGATATACTCCCTaGGATTGGGGTACACTTACA +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLYRYTP*DWGTLT
Trigger: TGTAAGTGTACCCCAATCTCAGGGAGTATATCTGTA...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTAACATTTTAGTTCCATaGACAATCAACCGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSNILVP*TINRGR
Trigger: CCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTT...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTCTGTGTGTTTCCATTTaGTCTGAGAGAAGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSLCVSI*SERSAE
Trigger: TTCAGCACTTCTCTCAGAGCAAATGGAAACACACAG...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTAAGGAGTGGATCTTTTaGCTGTGGCACTACAGATAT +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTKEWIF*LWHYRY
Trigger: ATATCTGTAGTGCCACAGGCAAAAGATCCACTCCTT...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTGTAAACTCAGAGAAATaGAGCCCTTCGAGTAAGTTC +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTVNSEK*SPSSKF
Trigger: GAACTTACTCGAAGGGCTGCATTTCTCTGAGTTTAC...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTAAAGTTCTCTCTTCTTaGGAAGGATGGGACAGAAAG +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTKVLSS*EGWDRK
Trigger: CTTTCTGTCCCATCCTTCCCAAGAAGAGAGAACTTT...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAAAAGTTCTCTCTTCTTaGGAAGGATGGGACAGAAAG +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLKVLSS*EGWDRK
Trigger: CTTTCTGTCCCATCCTTCCCAAGAAGAGAGAACTTT...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
3UTR CAA 72 bp CTGAGAGAAGTGCTGAAAAGGTTTGCTGTCCTCTCTTaGTTTCTACTATCTGTATTCTATCACCCTACTATA +
Preference number: 4 (lower is better)
Translates to: LREVLKRFAVLS*FLLSVFYHPTI
Trigger: TATAGTAGGGTGATAGAATACAGATAGTAGAAACAAAGAGAGGACAGCAAACCTTTTCAGCACTTCTCTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTAATGTCATAGAGTTTTaGAGTTCCAAGCACTCCCAT +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSNVIEF*SSKHSH
Trigger: ATGGGAGTGCTTGGAACTTCAAAACTCTATGACATT...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAGTAGGAAGATACATGTaGACATTCTGTACATGCAGT +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLVGRYM*TFCTCS
Trigger: ACTGCATGTACAGAATGTTCACATGTATCTTCCTAC...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR TCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACACTTTTTAACTGCATaGTCCCAGTTCGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLHFLTA*SQFVLF
Trigger: AAACAGAACGAACTGGGATCATGCAGTTAAAAAGTG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTGAGGTTCCAGGTGACTaGTTTATCTCACTTTTTAAC +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSEVPGD*FISLFN
Trigger: GTTAAAAAGTGAGATAAAGCAGTCACCTGGAACCTC...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTGATTGTCACTGGTTCTaGAAGAATTGTTCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSDCHWF*KNCSES
Trigger: ACTCTCTGAACAATTCTTGCAGAACCAGTGACAATC...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAGAATTTAGGATAGACTaGCAGTGCTGTACTTCATCA +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLEFRID*QCCTSS
Trigger: TGATGAAGTACAGCACTGCCAGTCTATCCTAAATTC...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTGTATGTCCAGAACAATaGCCATTCACACTCAATGTT +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTVCPEQ*PFTLNV
Trigger: AACATTGAGTGTGAATGGCCATTGTTCTGGACATAC...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACTGTTTCAGCTAGAATaGAGACTTGAACCACAACAT +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLLFQLE*RLEPQH
Trigger: ATGTTGTGGTTCAAGTCTCCATTCTAGCTGAAACAG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTGAATTTAATCTCACCTaGAGTCATCTCTCTAGTGGT +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSEFNLT*SHLSSG
Trigger: ACCACTAGAGAGATGACTCCAGGTGAGATTAAATTC...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTTTCTGCATTTTCTGCTaGAAATACAACTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTFCIFC*KYNSEY
Trigger: GTACTCAGAGTTGTATTTGCAGCAGAAAATGCAGAA...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTTTCTGCATTTTCTGCTaGAAATACAACTCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSFCIFC*KYNSEY
Trigger: GTACTCAGAGTTGTATTTGCAGCAGAAAATGCAGAA...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR GCA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTCTACGAAATTCCACCTaGTTTATCTCACTTTTTAAC +
Preference number: 4 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTLRNST*FISLFN
Trigger: GTTAAAAAGTGAGATAAAGCAGGTGGAATTTCGTAG...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373542.9
ENST00000373545.7
CDS-3UTR CCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACTGGTCTATAAACTGTaGAGTGAAAGTAAAGATAGT +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLLVYKL*SESKDS
Trigger: ACTATCTTTACTTTCACTCCACAGTTTATAGACCAG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CCA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAGGGTTCGCATATACATaGCTAGATATACCATTATTT +
Preference number: 4 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLGFAYT*LDIPLF
Trigger: AAATAATGGTATATCTAGCCATGTATATGCGAACCC...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 90 bp GGCACAGATGCTGTGGGGCAGGAACTCCTGCACGTAGGTGGCGGCTaGCTTGGAGAGGTAGGTCATGGTGCCAAACCTGCCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: GTDAVGQELLHVGGG*LGEVGHGAKPATGC
Trigger: GCACCCAGTGGCAGGTTTGGCACCATGACCTACCTCTCCAAGGCAGCCGCCACCTACGTGCAGGAGTTCCTGCCCCACAGCATCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 90 bp GGCTCCCAGAAGCCAGGAACCAAAGCCCTCATTGCATGGCACAGATaGTGTGGGGCAGGAACTCCTGCACGTAGGTGGCGGCTGCCTTGG +
Preference number: 5 (lower is better)
Translates to: GSQKPGTKALIAWHR*CGAGTPARRWRLPW
Trigger: CCAAGGCAGCCGCCACCTACGTGCAGGAGTTCCTGCCCCACAGCATCTGTGCCATGCAATGAGGGCTTTGGTTCCTGGCTTCTGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCATGCGCCGCCTCCACCTaGCGGGAGACGCGAGCGGGA +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPCAAST*RETRAG
Trigger: TCCCGCTCGCGTCTCCCGCAAGGTGGAGGCGGCGCA...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373542.9
ENST00000373545.7
CDS CCA 90 bp ATTGCATGGCACAGATGCTGTGGGGCAGGAACTCCTGCACGTAGGTaGCGGCTGCCTTGGAGAGGTAGGTCATGGTGCCAAACCTGCCAC +
Preference number: 5 (lower is better)
Translates to: IAWHRCCGAGTPARR*RLPWRGRSWCQTCH
Trigger: GTGGCAGGTTTGGCACCATGACCTACCTCTCCAAGGCAGCCGCCACCTACGTGCAGGAGTTCCTGCCCCACAGCATCTGTGCCATGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 90 bp CTGTCAAAAGGCTCCCAGAAGCCAGGAACCAAAGCCCTCATTGCATaGCACAGATGCTGTGGGGCAGGAACTCCTGCACGTAGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: LSKGSQKPGTKALIA*HRCCGAGTPARRWR
Trigger: CCGCCACCTACGTGCAGGAGTTCCTGCCCCACAGCATCTGTGCCATGCAATGAGGGCTTTGGTTCCTGGCTTCTGGGAGCCTTTTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 90 bp GGAACTCCTGCACGTAGGTGGCGGCTGCCTTGGAGAGGTAGGTCATaGTGCCAAACCTGCCACTGGGTGCACTGTCATACAGAAGAGTAC +
Preference number: 5 (lower is better)
Translates to: GTPARRWRLPWRGRS*CQTCHWVHCHTEEY
Trigger: GTACTCTTCTGTATGACAGTGCACCCAGTGGCAGGTTTGGCACCATGACCTACCTCTCCAAGGCAGCCGCCACCTACGTGCAGGAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACCTTCCTCTCTGGAATaGGGCTCCGGGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPPSSLE*GSGLHF
Trigger: GAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGG...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTTGCGCCGCCTCCACCTaGCGGGAGACGCGAGCGGGA +
Preference number: 5 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSCAAST*RETRAG
Trigger: TCCCGCTCGCGTCTCCCGCAAGGTGGAGGCGGCGCA...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373542.9
ENST00000373545.7
CDS GCA 90 bp CGTAGGTGGCGGCTGCCTTGGAGAGGTAGGTCATGGTGCCAAACCTaGCACTGGGTGCACTGTCATACAGAAGAGTACAGATGCCAGATG +
Preference number: 5 (lower is better)
Translates to: RRWRLPWRGRSWCQT*HWVHCHTEEYRCQM
Trigger: CATCTGGCATCTGTACTCTTCTGTATGACAGTGCACCCAGTGGCAGGTTTGGCACCATGACCTACCTCTCCAAGGCAGCCGCCACCTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 90 bp TGGCGGCTGCCTTGGAGAGGTAGGTCATGGTGCCAAACCTGCCACTaGGTGCACTGTCATACAGAAGAGTACAGATGCCAGATGCGGGAT +
Preference number: 5 (lower is better)
Translates to: WRLPWRGRSWCQTCH*VHCHTEEYRCQMRD
Trigger: ATCCCGCATCTGGCATCTGTACTCTTCTGTATGACAGTGCACCCAGTGGCAGGTTTGGCACCATGACCTACCTCTCCAAGGCAGCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACTTCCAGGGCTGCCTTaGCCATTCCAACTGAACTGG +
Preference number: 5 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPLPGLP*PFQLNW
Trigger: CCAGTTCAGTTGGAATGGCAAAGGCAGCCCTGGAAG...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCAGCCTTCTTCGGCGTaGCCATTGACCTTGACGACT +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAQPSSA*PLTLTT
Trigger: AGTCGTCAAGGTCAATGGCAACGCCGAAGAAGGCTG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCTGTACATGCAGTTCCTaGGCCTTGGTCACCAAGGAC +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEACTCSS*ALVTKD
Trigger: GTCCTTGGTGACCAAGGCCAAGGAACTGCATGTACA...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGAACCAAAGCCCTCATaGCATGGCACAGATGCTGTG +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAEPKPS*HGTDAV
Trigger: CACAGCATCTGTGCCATGCAATGAGGGCTTTGGTTC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCCCTTCCTCTCTGGAATaGGGCTCCGGGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCPSSLE*GSGLHF
Trigger: GAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGG...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAGTGGGACTCCATTTTaGCCCTTGATGAGGACTGCT +
Preference number: 5 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPSGTPF*PLMRTA
Trigger: AGCAGTCCTCATCAAGGGCAAAAATGGAGTCCCACT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAGTGGGACTCCATTTTaGCCCTTGATGAGGACTGCT +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEASGTPF*PLMRTA
Trigger: AGCAGTCCTCATCAAGGGCAAAAATGGAGTCCCACT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACCAGTTCGTTCTGTTTaGGTTGCTCCAACAGCACCA +
Preference number: 5 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPPVRSV*VAPTAP
Trigger: TGGTGCTGTTGGAGCAACCAAAACAGAACGAACTGG...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCAGATGCGGGATCCTTaGCCAACATGGTATCATCTG +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAQMRDP*PTWYHL
Trigger: CAGATGATACCATGTTGGCAAAGGATCCCGCATCTG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACAGATGCGGGATCCTTaGCCAACATGGTATCATCTG +
Preference number: 5 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPQMRDP*PTWYHL
Trigger: CAGATGATACCATGTTGGCAAAGGATCCCGCATCTG...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTCCTTCCTCTCTGGAATaGGGCTCCGGGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFPSSLE*GSGLHF
Trigger: GAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGG...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCACTTCCAGGGCTGCCTTaGCCATTCCAACTGAACTGG +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPLPGLP*PFQLNW
Trigger: CCAGTTCAGTTGGAATGGCAAAGGCAGCCCTGGAAG...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTCTTCCAGGGCTGCCTTaGCCATTCCAACTGAACTGG +
Preference number: 5 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFLPGLP*PFQLNW
Trigger: CCAGTTCAGTTGGAATGGCAAAGGCAGCCCTGGAAG...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCTCTTCGGCGTTGCCATaGACCTTGACGACTATCTTT +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEASSALP*TLTTIF
Trigger: AAAGATAGTCGTCAAGGTCAATGGCAACGCCGAAGA...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCGAACCAAAGCCCTCATaGCATGGCACAGATGCTGTG +
Preference number: 5 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCEPKPS*HGTDAV
Trigger: CACAGCATCTGTGCCATGCAATGAGGGCTTTGGTTC...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 90 bp AGTTCCTTGGCCTTGGTCACCAAGGACATTAAGTCGCAGGTTGTTTaGACAGCAGCTTGGAACCGATCTAGCCCTCCCTTCTGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: SSLALVTKDIKSQVV*TAAWNRSSPPFCEV
Trigger: TACCTCACAGAAGGGAGGGCTAGATCGGTTCCAAGCTGCTGTGCAAACAACCTGCGACTTAATGTCCTTGGTGACCAAGGCCAAGGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS GCA 90 bp CCTGCCACTGGGTGCACTGTCATACAGAAGAGTACAGATGCCAGATaGGGGATCCTTTGCCAACATGGTATCATCTGCGCCAAGGGTTTT +
Preference number: 5 (lower is better)
Translates to: PATGCTVIQKSTDAR*GILCQHGIICAKGF
Trigger: AAAACCCTTGGCGCAGATGATACCATGTTGGCAAAGGATCCCGCATCTGGCATCTGTACTCTTCTGTATGACAGTGCACCCAGTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 90 bp TGCCAAACCTGCCACTGGGTGCACTGTCATACAGAAGAGTACAGATaGCAGATGCGGGATCCTTTGCCAACATGGTATCATCTGCGCCAA +
Preference number: 5 (lower is better)
Translates to: CQTCHWVHCHTEEYR*QMRDPLPTWYHLRQ
Trigger: TTGGCGCAGATGATACCATGTTGGCAAAGGATCCCGCATCTGGCATCTGTACTCTTCTGTATGACAGTGCACCCAGTGGCAGGTTTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 90 bp TTCATCGACCCTGTCAGGAGGAACACTGTACAGCTCTGGCAGAAGTaGGACTCCATTTTTGCCCTTGATGAGGACTGCTTCAAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: FIDPVRRNTVQLWQK*DSIFALDEDCFKSL
Trigger: GAGGCTCTTGAAGCAGTCCTCATCAAGGGCAAAAATGGAGTCCCACTTCTGCCAGAGCTGTACAGTGTTCCTCCTGACAGGGTCGATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAACTCCATTTTTGCCCTaGATGAGGACTGCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPTPFLP*MRTASR
Trigger: TCTTGAAGCAGTCCTCATCAAGGGCAAAAATGGAGT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCAGTGGGACTCCATTTTaGCCCTTGATGAGGACTGCT +
Preference number: 5 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCSGTPF*PLMRTA
Trigger: AGCAGTCCTCATCAAGGGCAAAAATGGAGTCCCACT...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACCAAAATACCCATCTaGCATTTTTCGGAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEATKIPI*HFSECC
Trigger: GCAGCACTCCGAAAAATGCAAGATGGGTATTTTGGT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCTTCGTTCTGTTTTGGTaGCTCCAACAGCACCAATCT +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAFVLFW*LQQHQS
Trigger: AGATTGGTGCTGTTGGAGCAACCAAAACAGAACGAA...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCCAGATGCGGGATCCTTaGCCAACATGGTATCATCTG +
Preference number: 5 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCQMRDP*PTWYHL
Trigger: CAGATGATACCATGTTGGCAAAGGATCCCGCATCTG...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAATATACTCCCTGAGATaGGGGTACACTTACAACCAG +
Preference number: 5 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPIYSLR*GYTYNQ
Trigger: CTGGTTGTAAGTGTACCCCAATCTCAGGGAGTATAT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 90 bp TTGGTCACCAAGGACATTAAGTCGCAGGTTGTTTGCACAGCAGCTTaGAACCGATCTAGCCCTCCCTTCTGTGAGGTAGGGGCTAGTTTA +
Preference number: 5 (lower is better)
Translates to: LVTKDIKSQVVCTAA*NRSSPPFCEVGASL
Trigger: TAAACTAGCCCCTACCTCACAGAAGGGAGGGCTAGATCGGTTCCAAGCTGCTGTGCAAACAACCTGCGACTTAATGTCCTTGGTGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS CCA 90 bp CGCCTCATAGGGCAGAGGTGCAGAGATAGTCTTTTCTCGAGGTTCTaGAGGAAGTCCTACTGTCAAATGTTTCTGGTGGGAGAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: RLIGQRCRDSLFSRF*RKSYCQMFLVGEKV
Trigger: GACCTTCTCTCCCACCAGAAACATTTGACAGTAGGACTTCCTCCAGAACCTCGAGAAAAGACTATCTCTGCACCTCTGCCCTATGAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTCAACCTCTTTTGATGTaGAAGCACGGGGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFQPLLM*KHGAVV
Trigger: CACTACTGCCCCGTGCTTCAACATCAAAAGAGGTTG...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAAGCCTCTTTATATTCTaGAACCTGTTCTGCATTGCC +
Preference number: 5 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPSLFIF*NLFCIA
Trigger: GGCAATGCAGAACAGGTTCAAGAATATAAAGAGGCT...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCGAGAATACGAGCTGGTaGTACTCTGATGGGGTATAC +
Preference number: 5 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCENTSW*YSDGVY
Trigger: GTATACCCCATCAGAGTACAACCAGCTCGTATTCTC...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCACTGAGTTTCATTCTATaGTTGCATCCTAGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPLSFIL*LHPRLE
Trigger: TTCCAGCCTAGGATGCAACAATAGAATGAAACTCAG...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCCTGAGTTTCATTCTATaGTTGCATCCTAGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEALSFIL*LHPRLE
Trigger: TTCCAGCCTAGGATGCAACAATAGAATGAAACTCAG...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGAATGTCATAGAGTTTaGAAGTTCCAAGCACTCCCA +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAECHRV*KFQALP
Trigger: TGGGAGTGCTTGGAACTTCAAAACTCTATGACATTC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAGCGAGCATGACTGGTaGAATCATAATCATTCATCC +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEASEHDW*NHNHSS
Trigger: GGATGAATGATTATGATTCAACCAGTCATGCTCGCT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCACCAGTTCGTTCTGTTTaGGTTGCTCCAACAGCACCA +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPPVRSV*VAPTAP
Trigger: TGGTGCTGTTGGAGCAACCAAAACAGAACGAACTGG...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCTCTTCGGCGTTGCCATaGACCTTGACGACTATCTTT +
Preference number: 5 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCSSALP*TLTTIF
Trigger: AAAGATAGTCGTCAAGGTCAATGGCAACGCCGAAGA...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACAGCCTTCTTCGGCGTaGCCATTGACCTTGACGACT +
Preference number: 5 (lower is better)
Translates to: LPPICVCQSESTVTSLLSQPSSA*PLTLTT
Trigger: AGTCGTCAAGGTCAATGGCAACGCCGAAGAAGGCTG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 90 bp CTGATATTCTTCATCGACCCTGTCAGGAGGAACACTGTACAGCTCTaGCAGAAGTGGGACTCCATTTTTGCCCTTGATGAGGACTGCTTC +
Preference number: 5 (lower is better)
Translates to: LIFFIDPVRRNTVQL*QKWDSIFALDEDCF
Trigger: GAAGCAGTCCTCATCAAGGGCAAAAATGGAGTCCCACTTCTGCCAGAGCTGTACAGTGTTCCTCCTGACAGGGTCGATGAAGAATATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTCTTCCAGGGCTGCCTTaGCCATTCCAACTGAACTGG +
Preference number: 5 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSLPGLP*PFQLNW
Trigger: CCAGTTCAGTTGGAATGGCAAAGGCAGCCCTGGAAG...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCACTCCATTTTTGCCCTaGATGAGGACTGCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCTPFLP*MRTASR
Trigger: TCTTGAAGCAGTCCTCATCAAGGGCAAAAATGGAGT...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAGCCAGGTAGAACTGTaGCTGGTCTATAAACTGTGG +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPSQVEL*LVYKLW
Trigger: CCACAGTTTATAGACCAGCAACAGTTCTACCTGGCT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAACATTAAGTCGCAGGTaGTTTGCACAGCAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPTLSRR*FAQQLG
Trigger: TCCAAGCTGCTGTGCAAACAACCTGCGACTTAATGT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR CAA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCCTTGTTCCTGTAAGCTaGAGGTCTCCTTCAACTGTA +
Preference number: 5 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCLVPVS*RSPSTV
Trigger: TACAGTTGAAGGAGACCTCAAGCTTACAGGAACAAG...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCACGAATTTCTCCCACTTaGCCATACAGCTCGGTAAGA +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPRISPT*PYSSVR
Trigger: TCTTACCGAGCTGTATGGCAAAGTGGGAGAAATTCG...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATTCTGTTGCCATAACTaGTATGATCAGACCAATTCG +
Preference number: 5 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPFCCHN*YDQTNS
Trigger: CGAATTGGTCTGATCATACAAGTTATGGCAACAGAA...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCTTCTGTTGCCATAACTaGTATGATCAGACCAATTCG +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAFCCHN*YDQTNS
Trigger: CGAATTGGTCTGATCATACAAGTTATGGCAACAGAA...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCATCTTCGGCGTTGCCATaGACCTTGACGACTATCTTT +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPSSALP*TLTTIF
Trigger: AAAGATAGTCGTCAAGGTCAATGGCAACGCCGAAGA...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAACAGCCTTCTTCGGCGTaGCCATTGACCTTGACGACT +
Preference number: 5 (lower is better)
Translates to: NCSESLSSPPSPFPILGKQPSSA*PLTLTT
Trigger: AGTCGTCAAGGTCAATGGCAACGCCGAAGAAGGCTG...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTCAGCCTTCTTCGGCGTaGCCATTGACCTTGACGACT +
Preference number: 5 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSQPSSA*PLTLTT
Trigger: AGTCGTCAAGGTCAATGGCAACGCCGAAGAAGGCTG...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCAGACGCTTCAAATTATaGTCTGTGTTGTGTATTGGC +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEARRFKL*SVLCIG
Trigger: GCCAATACACAACACAGACAATAATTTGAAGCGTCT...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAACTCCATTTTTGCCCTaGATGAGGACTGCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPTPFLP*MRTASR
Trigger: TCTTGAAGCAGTCCTCATCAAGGGCAAAAATGGAGT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATCCTTCAAAATGGTCTaGATTTCTTCTGTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPSFKMV*ISSVSA
Trigger: AGCTGAAACAGAAGAAATCAAGACCATTTTGAAGGA...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCCTGAGTTTCATTCTATaGTTGCATCCTAGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCLSFIL*LHPRLE
Trigger: TTCCAGCCTAGGATGCAACAATAGAATGAAACTCAG...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCGAATGTCATAGAGTTTaGAAGTTCCAAGCACTCCCA +
Preference number: 5 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCECHRV*KFQALP
Trigger: TGGGAGTGCTTGGAACTTCAAAACTCTATGACATTC...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCATACTTGAATTCAAGCTaGTTCCATCTTCATCAAGCA +
Preference number: 5 (lower is better)
Translates to: PCTINRGRDQLSKGSQKPYLNSS*FHLHQA
Trigger: TGCTTGATGAAGATGGAACAAGCTTGAATTCAAGTA...TGGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGTGCTGCCAGGATACTaGAATTCAAGCTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPVLPGY*NSSLFH
Trigger: ATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCAC...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTGTGCTGCCAGGATACTaGAATTCAAGCTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFVLPGY*NSSLFH
Trigger: ATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCAC...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGAAGCCGTGTGCAACAAGATGTaGTCAAAAACTCTGACAATT +
Preference number: 5 (lower is better)
Translates to: SMHNQPRQGPAVKRLPEAVCNKM*SKTLTI
Trigger: AATTGTCAGAGTTTTTGACAACATCTTGTTGCACAC...GGCTTCTGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAATGTACATGCAGTTCCTaGGCCTTGGTCACCAAGGAC +
Preference number: 5 (lower is better)
Translates to: NCSESLSSPPSPFPILGKCTCSS*ALVTKD
Trigger: GTCCTTGGTGACCAAGGCCAAGGAACTGCATGTACA...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CAA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTCTTGTTCCTGTAAGCTaGAGGTCTCCTTCAACTGTA +
Preference number: 5 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFLVPVS*RSPSTV
Trigger: TACAGTTGAAGGAGACCTCAAGCTTACAGGAACAAG...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACCAGTTCGTTCTGTTTaGGTTGCTCCAACAGCACCA +
Preference number: 5 (lower is better)
Translates to: LPPICVCQSESTVTSLLSPVRSV*VAPTAP
Trigger: TGGTGCTGTTGGAGCAACCAAAACAGAACGAACTGG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACACCAGTTCGTTCTGTTTaGGTTGCTCCAACAGCACCA +
Preference number: 5 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTPVRSV*VAPTAP
Trigger: TGGTGCTGTTGGAGCAACCAAAACAGAACGAACTGG...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACAGATGCGGGATCCTTaGCCAACATGGTATCATCTG +
Preference number: 5 (lower is better)
Translates to: LPPICVCQSESTVTSLLSQMRDP*PTWYHL
Trigger: CAGATGATACCATGTTGGCAAAGGATCCCGCATCTG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTGAACCAAAGCCCTCATaGCATGGCACAGATGCTGTG +
Preference number: 5 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSEPKPS*HGTDAV
Trigger: CACAGCATCTGTGCCATGCAATGAGGGCTTTGGTTC...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGACTCTCAGCTGAGATaGACAGTCTACGAAATTCCA +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPDSQLR*TVYEIP
Trigger: TGGAATTTCGTAGACTGTCAATCTCAGCTGAGAGTC...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
CDS TCA 90 bp CAGCCTTCTTCGGCGTTGCCATTGACCTTGACGACTATCTTTAGATaGCTGCTGATCATATGCACTAGGAAAGGACCCACTACTTGGAGT +
Preference number: 5 (lower is better)
Translates to: QPSSALPLTLTTIFR*LLIICTRKGPTTWS
Trigger: ACTCCAAGTAGTGGGTCCTTTCCTAGTGCATATGATCAGCAGTCATCTAAAGATAGTCGTCAAGGTCAATGGCAACGCCGAAGAAGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 90 bp CAGCTCTGGCAGAAGTGGGACTCCATTTTTGCCCTTGATGAGGACTaGTTCAAGAGCCTCTTTATATTCTTGAACCTGTTCTGCATTGCC +
Preference number: 5 (lower is better)
Translates to: QLWQKWDSIFALDED*FKSLFIFLNLFCIA
Trigger: GGCAATGCAGAACAGGTTCAAGAATATAAAGAGGCTCTTGAAGCAGTCCTCATCAAGGGCAAAAATGGAGTCCCACTTCTGCCAGAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCAACCTCTTTTGATGTaGAAGCACGGGGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLQPLLM*KHGAVV
Trigger: CACTACTGCCCCGTGCTTCAACATCAAAAGAGGTTG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAAGCCTCTTTATATTCTaGAACCTGTTCTGCATTGCC +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPSLFIF*NLFCIA
Trigger: GGCAATGCAGAACAGGTTCAAGAATATAAAGAGGCT...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTAGTGGGACTCCATTTTaGCCCTTGATGAGGACTGCT +
Preference number: 5 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSSGTPF*PLMRTA
Trigger: AGCAGTCCTCATCAAGGGCAAAAATGGAGTCCCACT...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTGAATGTCATAGAGTTTaGAAGTTCCAAGCACTCCCA +
Preference number: 5 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFECHRV*KFQALP
Trigger: TGGGAGTGCTTGGAACTTCAAAACTCTATGACATTC...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAAGCCAGGTAGAACTGTaGCTGGTCTATAAACTGTGG +
Preference number: 5 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTSQVEL*LVYKLW
Trigger: CCACAGTTTATAGACCAGCAACAGTTCTACCTGGCT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACATACCTGTTTGAACCCTaGCCCCACCAAAATACCCAT +
Preference number: 5 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTYLFEP*PHQNTH
Trigger: ATGGGTATTTTGGTGGGGCAAGGGTTCAAACAGGTA...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTAGCGAGCATGACTGGTaGAATCATAATCATTCATCC +
Preference number: 5 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFSEHDW*NHNHSS
Trigger: GGATGAATGATTATGATTCAACCAGTCATGCTCGCT...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAACATTAAGTCGCAGGTaGTTTGCACAGCAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTTLSRR*FAQQLG
Trigger: TCCAAGCTGCTGTGCAAACAACCTGCGACTTAATGT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTGCAGTTCCTTGGCCTaGGTCACCAAGGACATTAAG +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLCSSLA*VTKDIK
Trigger: CTTAATGTCCTTGGTGACCAAGGCCAAGGAACTGCA...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAATGCAGTTCCTTGGCCTaGGTCACCAAGGACATTAAG +
Preference number: 5 (lower is better)
Translates to: NCSESLSSPPSPFPILGKCSSLA*VTKDIK
Trigger: CTTAATGTCCTTGGTGACCAAGGCCAAGGAACTGCA...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CAA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCATCTTCGGCGTTGCCATaGACCTTGACGACTATCTTT +
Preference number: 5 (lower is better)
Translates to: LPPICVCQSESTVTSLLSSSALP*TLTTIF
Trigger: AAAGATAGTCGTCAAGGTCAATGGCAACGCCGAAGA...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS TCA 90 bp ACTTTCTTCCTTAAGATCCCAGAAATGTATCGGATCAGGCCCCAGTaGCGAATTTCTCCCACTTTGCCATACAGCTCGGTAAGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: TFFLKIPEMYRIRPQ*RISPTLPYSSVRSS
Trigger: AGAGCTTCTTACCGAGCTGTATGGCAAAGTGGGAGAAATTCGTCACTGGGGCCTGATCCGATACATTTCTGGGATCTTAAGGAAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 90 bp ATCCCAGTTCGTTCTGTTTTGGTTGCTCCAACAGCACCAATCTCGTaGATAGAAATAGCAGGACTGACATTTGAATCAGTGGGACGAACG +
Preference number: 5 (lower is better)
Translates to: IPVRSVLVAPTAPIS*IEIAGLTFESVGRT
Trigger: CGTTCGTCCCACTGATTCAAATGTCAGTCCTGCTATTTCTATCCACGAGATTGGTGCTGTTGGAGCAACCAAAACAGAACGAACTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 90 bp CATACAGAAGAGTACAGATGCCAGATGCGGGATCCTTTGCCAACATaGTATCATCTGCGCCAAGGGTTTTCTGTTCTTGAAGGAACAAGT +
Preference number: 5 (lower is better)
Translates to: HTEEYRCQMRDPLPT*YHLRQGFSVLEGTS
Trigger: ACTTGTTCCTTCAAGAACAGAAAACCCTTGGCGCAGATGATACCATGTTGGCAAAGGATCCCGCATCTGGCATCTGTACTCTTCTGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAACTCCATTTTTGCCCTaGATGAGGACTGCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTTPFLP*MRTASR
Trigger: TCTTGAAGCAGTCCTCATCAAGGGCAAAAATGGAGT...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGAGAATACGAGCTGGTaGTACTCTGATGGGGTATAC +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLENTSW*YSDGVY
Trigger: GTATACCCCATCAGAGTACAACCAGCTCGTATTCTC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTAGCCAGGTAGAACTGTaGCTGGTCTATAAACTGTGG +
Preference number: 5 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSSQVEL*LVYKLW
Trigger: CCACAGTTTATAGACCAGCAACAGTTCTACCTGGCT...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGAGCCAGGTAGAACTGTaGCTGGTCTATAAACTGTGG +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLSQVEL*LVYKLW
Trigger: CCACAGTTTATAGACCAGCAACAGTTCTACCTGGCT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTACCTGTTTGAACCCTaGCCCCACCAAAATACCCAT +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLYLFEP*PHQNTH
Trigger: ATGGGTATTTTGGTGGGGCAAGGGTTCAAACAGGTA...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTTCCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCGTGTGCAACAAGATGTaGTCAAAAACTCTGACAATT +
Preference number: 5 (lower is better)
Translates to: LSLPLWNWAPGSISGLFCVCNKM*SKTLTI
Trigger: AATTGTCAGAGTTTTTGACAACATCTTGTTGCACAC...GCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAACATTAAGTCGCAGGTaGTTTGCACAGCAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: NCSESLSSPPSPFPILGKTLSRR*FAQQLG
Trigger: TCCAAGCTGCTGTGCAAACAACCTGCGACTTAATGT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACACTTGTTCCTGTAAGCTaGAGGTCTCCTTCAACTGTA +
Preference number: 5 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTLVPVS*RSPSTV
Trigger: TACAGTTGAAGGAGACCTCAAGCTTACAGGAACAAG...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTCGAATTTCTCCCACTTaGCCATACAGCTCGGTAAGA +
Preference number: 5 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSRISPT*PYSSVR
Trigger: TCTTACCGAGCTGTATGGCAAAGTGGGAGAAATTCG...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCGAATTTCTCCCACTTaGCCATACAGCTCGGTAAGA +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLRISPT*PYSSVR
Trigger: TCTTACCGAGCTGTATGGCAAAGTGGGAGAAATTCG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CCCTTCCTCTCTGGAATTGGGCTCCGGGCTCCATTTCTGGGTTATTCTGCATTTTTCTGTTGCCATAACTaGTATGATCAGACCAATTCG +
Preference number: 5 (lower is better)
Translates to: PFLSGIGLRAPFLGYSAFFCCHN*YDQTNS
Trigger: CGAATTGGTCTGATCATACAAGTTATGGCAACAGAA...AAATGCAGAATAACCCAGAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCATTCGTTCTGTTTTGGTaGCTCCAACAGCACCAATCT +
Preference number: 5 (lower is better)
Translates to: LPPICVCQSESTVTSLLSFVLFW*LQQHQS
Trigger: AGATTGGTGCTGTTGGAGCAACCAAAACAGAACGAA...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCTTCGGCGTTGCCATaGACCTTGACGACTATCTTT +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLSSALP*TLTTIF
Trigger: AAAGATAGTCGTCAAGGTCAATGGCAACGCCGAAGA...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGACAGCCTTCTTCGGCGTaGCCATTGACCTTGACGACT +
Preference number: 5 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRQPSSA*PLTLTT
Trigger: AGTCGTCAAGGTCAATGGCAACGCCGAAGAAGGCTG...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCACCTATGTATAAGACATaGTCCAGGCATCGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LPPICVCQSESTVTSLLSPMYKT*SRHRLF
Trigger: GAAGAGACGATGCCTGGACAATGTCTTATACATAGG...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACACCTATGTATAAGACATaGTCCAGGCATCGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTPMYKT*SRHRLF
Trigger: GAAGAGACGATGCCTGGACAATGTCTTATACATAGG...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACACTGGTTCTGCAAGAATaGTTCAGAGAGTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTLVLQE*FRESLI
Trigger: GATGAGAGACTCTCTGAACAATTCTTGCAGAACCAG...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCCAACCTCTTTTGATGTaGAAGCACGGGGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRQPLLM*KHGAVV
Trigger: CACTACTGCCCCGTGCTTCAACATCAAAAGAGGTTG...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCATCCTTCAAAATGGTCTaGATTTCTTCTGTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPSFKMV*ISSVSA
Trigger: AGCTGAAACAGAAGAAATCAAGACCATTTTGAAGGA...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAGAATGTCATAGAGTTTaGAAGTTCCAAGCACTCCCA +
Preference number: 5 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTECHRV*KFQALP
Trigger: TGGGAGTGCTTGGAACTTCAAAACTCTATGACATTC...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAGTGCTGCCAGGATACTaGAATTCAAGCTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: NCSESLSSPPSPFPILGKVLPGY*NSSLFH
Trigger: ATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCAC...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGTGCTGCCAGGATACTaGAATTCAAGCTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLVLPGY*NSSLFH
Trigger: ATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCAC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGACCAAAATACCCATCTaGCATTTTTCGGAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLTKIPI*HFSECC
Trigger: GCAGCACTCCGAAAAATGCAAGATGGGTATTTTGGT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTCAAAAGGCTCCCAGTGTGCAACAAGATGTaGTCAAAAACTCTGACAATT +
Preference number: 5 (lower is better)
Translates to: FSSMHNQPRQGPAVKRLPVCNKM*SKTLTI
Trigger: AATTGTCAGAGTTTTTGACAACATCTTGTTGCACAC...TGGGAGCCTTTTGACAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCAAGCGAGCATGACTGGTaGAATCATAATCATTCATCC +
Preference number: 5 (lower is better)
Translates to: LPPICVCQSESTVTSLLSSEHDW*NHNHSS
Trigger: GGATGAATGATTATGATTCAACCAGTCATGCTCGCT...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGCTTGTTCCTGTAAGCTaGAGGTCTCCTTCAACTGTA +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLLVPVS*RSPSTV
Trigger: TACAGTTGAAGGAGACCTCAAGCTTACAGGAACAAG...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAACTTGTTCCTGTAAGCTaGAGGTCTCCTTCAACTGTA +
Preference number: 5 (lower is better)
Translates to: NCSESLSSPPSPFPILGKLVPVS*RSPSTV
Trigger: TACAGTTGAAGGAGACCTCAAGCTTACAGGAACAAG...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAATTCGTTCTGTTTTGGTaGCTCCAACAGCACCAATCT +
Preference number: 5 (lower is better)
Translates to: NCSESLSSPPSPFPILGKFVLFW*LQQHQS
Trigger: AGATTGGTGCTGTTGGAGCAACCAAAACAGAACGAA...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTCCTTCCTCTCTGGAATaGGGCTCCGGGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSPSSLE*GSGLHF
Trigger: GAAATGGAGCCCGGAGCCCAATTCCAGAGAGGAAGG...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTCCTATGTATAAGACATaGTCCAGGCATCGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSPMYKT*SRHRLF
Trigger: GAAGAGACGATGCCTGGACAATGTCTTATACATAGG...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTGTCAGGGAGTTGAGTaGGATGTAGTAGAAAGTAGG +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLCQGVE*DVVESR
Trigger: CCTACTTTCTACTACATCCAACTCAACTCCCTGACA...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAATGTCAGGGAGTTGAGTaGGATGTAGTAGAAAGTAGG +
Preference number: 5 (lower is better)
Translates to: NCSESLSSPPSPFPILGKCQGVE*DVVESR
Trigger: CCTACTTTCTACTACATCCAACTCAACTCCCTGACA...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAATATACTCCCTGAGATaGGGGTACACTTACAACCAG +
Preference number: 5 (lower is better)
Translates to: NCSESLSSPPSPFPILGKIYSLR*GYTYNQ
Trigger: CTGGTTGTAAGTGTACCCCAATCTCAGGGAGTATAT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGATATACTCCCTGAGATaGGGGTACACTTACAACCAG +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLIYSLR*GYTYNQ
Trigger: CTGGTTGTAAGTGTACCCCAATCTCAGGGAGTATAT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGGACTCTCAGCTGAGATaGACAGTCTACGAAATTCCA +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLDSQLR*TVYEIP
Trigger: TGGAATTTCGTAGACTGTCAATCTCAGCTGAGAGTC...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
CDS TCA 90 bp CATCATAATCTTCACTGTACAGCTTACCCTCAGGTCCAGGGTCCATaGAGCTCAAGTGTGTGCAACAAGATGTTGTCAAAAACTCTGACA +
Preference number: 5 (lower is better)
Translates to: HHNLHCTAYPQVQGP*SSSVCNKMLSKTLT
Trigger: TGTCAGAGTTTTTGACAACATCTTGTTGCACACACTTGAGCTTCATGGACCCTGGACCTGAGGGTAAGCTGTACAGTGAAGATTATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACTTCCAGGGCTGCCTTaGCCATTCCAACTGAACTGG +
Preference number: 5 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLLPGLP*PFQLNW
Trigger: CCAGTTCAGTTGGAATGGCAAAGGCAGCCCTGGAAG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGAGCCTCTTTATATTCTaGAACCTGTTCTGCATTGCC +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLSLFIF*NLFCIA
Trigger: GGCAATGCAGAACAGGTTCAAGAATATAAAGAGGCT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAAAGCCTCTTTATATTCTaGAACCTGTTCTGCATTGCC +
Preference number: 5 (lower is better)
Translates to: NCSESLSSPPSPFPILGKSLFIF*NLFCIA
Trigger: GGCAATGCAGAACAGGTTCAAGAATATAAAGAGGCT...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCGAGAATACGAGCTGGTaGTACTCTGATGGGGTATAC +
Preference number: 5 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRENTSW*YSDGVY
Trigger: GTATACCCCATCAGAGTACAACCAGCTCGTATTCTC...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGATGCAGTTCCTTGGCCTaGGTCACCAAGGACATTAAG +
Preference number: 5 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRCSSLA*VTKDIK
Trigger: CTTAATGTCCTTGGTGACCAAGGCCAAGGAACTGCA...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000373542.9
CDS-3UTR CAA 90 bp AATTGTTCAGAGAGTCTCTCATCCCCACCCTCACCATTCCCAATATTGGGGAAATGTCTGTGTTGTGTATaGGCCCATTTTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: NCSESLSSPPSPFPILGKCLCCV*AHFSKA
Trigger: TGCCTTTGAAAAATGGGCCAATACACAACACAGACA...TTTCCCCAATATTGGGAATGGTGAGGGTGGGGATGAGAGACTCTCTGAACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTTGTCTGTGTTGTGTATaGGCCCATTTTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSCLCCV*AHFSKA
Trigger: TGCCTTTGAAAAATGGGCCAATACACAACACAGACA...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCATACTTGAATTCAAGCTaGTTCCATCTTCATCAAGCA +
Preference number: 5 (lower is better)
Translates to: LPPICVCQSESTVTSLLSYLNSS*FHLHQA
Trigger: TGCTTGATGAAGATGGAACAAGCTTGAATTCAAGTA...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCACCAAAATACCCATCTaGCATTTTTCGGAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRTKIPI*HFSECC
Trigger: GCAGCACTCCGAAAAATGCAAGATGGGTATTTTGGT...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AAGTTCAGGCAAATGAGTGTGGGAAGGAGTGGATCTTTTGCCTGTGGCACTACAGTGTGCAACAAGATGTaGTCAAAAACTCTGACAATT +
Preference number: 5 (lower is better)
Translates to: KFRQMSVGRSGSFACGTTVCNKM*SKTLTI
Trigger: AATTGTCAGAGTTTTTGACAACATCTTGTTGCACAC...TGTAGTGCCACAGGCAAAAGATCCACTCCTTCCCACACTCATTTGCCTGAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCGTTCTGTTTTGGTaGCTCCAACAGCACCAATCT +
Preference number: 5 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRFVLFW*LQQHQS
Trigger: AGATTGGTGCTGTTGGAGCAACCAAAACAGAACGAA...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTGAACCAAAGCCCTCATaGCATGGCACAGATGCTGTG +
Preference number: 5 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSEPKPS*HGTDAV
Trigger: CACAGCATCTGTGCCATGCAATGAGGGCTTTGGTTC...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGAGACGCTTCAAATTATaGTCTGTGTTGTGTATTGGC +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLRRFKL*SVLCIG
Trigger: GCCAATACACAACACAGACAATAATTTGAAGCGTCT...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTCTGCTGTATTTATCTTaGCTGAATACAGACGCTTCA +
Preference number: 5 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSLLYLS*LNTDAS
Trigger: TGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAG...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTGTCAGGGAGTTGAGTaGGATGTAGTAGAAAGTAGG +
Preference number: 5 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRCQGVE*DVVESR
Trigger: CCTACTTTCTACTACATCCAACTCAACTCCCTGACA...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTCCACCAATCTGTGTGTGTCAATCTGAGTCCACAGTCACATCCCTTCTCTCATTTGCTGTCCTCTCTTaGTTTCTACTATCTGTATTC +
Preference number: 5 (lower is better)
Translates to: LPPICVCQSESTVTSLLSFAVLS*FLLSVF
Trigger: GAATACAGATAGTAGAAACAAAGAGAGGACAGCAAA...TGAGAGAAGGGATGTGACTGTGGACTCAGATTGACACACACAGATTGGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS TCA 90 bp ACAGTCTACGAAATTCCACCTGCTTTATCTCACTTTTTAACTGCATaGTCCCAGTTCGTTCTGTTTTGGTTGCTCCAACAGCACCAATCT +
Preference number: 5 (lower is better)
Translates to: TVYEIPPALSHFLTA*SQFVLFWLLQQHQS
Trigger: AGATTGGTGCTGTTGGAGCAACCAAAACAGAACGAACTGGGATCATGCAGTTAAAAAGTGAGATAAAGCAGGTGGAATTTCGTAGACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
CDS CCA 90 bp ATCAGACCAATTCGAAGTCGAAACATTTCAGCAAAGAGGCCAGGCTaGGTTCGCATATACATGGCTAGATATACCATTATTTCCTGTGTA +
Preference number: 5 (lower is better)
Translates to: IRPIRSRNISAKRPG*VRIYMARYTIISCV
Trigger: TACACAGGAAATAATGGTATATCTAGCCATGTATATGCGAACCCAGCCTGGCCTCTTTGCTGAAATGTTTCGACTTCGAATTGGTCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTCAACCTCTTTTGATGTaGAAGCACGGGGCAGTAGTG +
Preference number: 5 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSQPLLM*KHGAVV
Trigger: CACTACTGCCCCGTGCTTCAACATCAAAAGAGGTTG...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAACTCCATTTTTGCCCTaGATGAGGACTGCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRTPFLP*MRTASR
Trigger: TCTTGAAGCAGTCCTCATCAAGGGCAAAAATGGAGT...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GAGAGGCATTATGTGTGCAGACACAGAGAGGGCAACAGTAGAGACAATGATTCTTCCTTCAAAATGGTCTaGATTTCTTCTGTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: ERHYVCRHREGNSRDNDSSFKMV*ISSVSA
Trigger: AGCTGAAACAGAAGAAATCAAGACCATTTTGAAGGA...AGAATCATTGTCTCTACTGTTGCCCTCTCTGTGTCTGCACACATAATGCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp TTAGGCAATAACATTTTAGTTCCATGCACAATCAACCGAGGCAGGGACCAGCTGTACTTGAATTCAAGCTaGTTCCATCTTCATCAAGCA +
Preference number: 5 (lower is better)
Translates to: LGNNILVPCTINRGRDQLYLNSS*FHLHQA
Trigger: TGCTTGATGAAGATGGAACAAGCTTGAATTCAAGTA...CAGCTGGTCCCTGCCTCGGTTGATTGTGCATGGAACTAAAATGTTATTGCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGAGTGCTGCCAGGATACTaGAATTCAAGCTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRVLPGY*NSSLFH
Trigger: ATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCAC...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTCAGATGCGGGATCCTTaGCCAACATGGTATCATCTG +
Preference number: 5 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTQMRDP*PTWYHL
Trigger: CAGATGATACCATGTTGGCAAAGGATCCCGCATCTG...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTGTCTGTGTTGTGTATaGGCCCATTTTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRCLCCV*AHFSKA
Trigger: TGCCTTTGAAAAATGGGCCAATACACAACACAGACA...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGACTGGTTCTGCAAGAATaGTTCAGAGAGTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRLVLQE*FRESLI
Trigger: GATGAGAGACTCTCTGAACAATTCTTGCAGAACCAG...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS TCA 90 bp CAGCAATGGTCTCCACGTAAATTCCCTTGTCCTTCAAAATGGTCTTaGTTTCTTCTGTTTCAGCTAGAATGGAGACTTGAACCACAACAT +
Preference number: 5 (lower is better)
Translates to: QQWSPRKFPCPSKWS*FLLFQLEWRLEPQH
Trigger: ATGTTGTGGTTCAAGTCTCCATTCTAGCTGAAACAGAAGAAATCAAGACCATTTTGAAGGACAAGGGAATTTACGTGGAGACCATTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 90 bp CACCACAGCGAGCATGACTGGTTGAATCATAATCATTCATCCAGTTaGCAGATTCCAGGTAATCATAGTTGTCATCATAATCTTCACTGT +
Preference number: 5 (lower is better)
Translates to: HHSEHDWLNHNHSSS*QIPGNHSCHHNLHC
Trigger: ACAGTGAAGATTATGATGACAACTATGATTACCTGGAATCTGGCAACTGGATGAATGATTATGATTCAACCAGTCATGCTCGCTGTGGTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS-3UTR CAA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGACTGAGTTTCATTCTATaGTTGCATCCTAGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRLSFIL*LHPRLE
Trigger: TTCCAGCCTAGGATGCAACAATAGAATGAAACTCAG...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTAGCCAGGTAGAACTGTaGCTGGTCTATAAACTGTGG +
Preference number: 5 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTSQVEL*LVYKLW
Trigger: CCACAGTTTATAGACCAGCAACAGTTCTACCTGGCT...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTATACCTGTTTGAACCCTaGCCCCACCAAAATACCCAT +
Preference number: 5 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLYLFEP*PHQNTH
Trigger: ATGGGTATTTTGGTGGGGCAAGGGTTCAAACAGGTA...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTTACCTGTTTGAACCCTaGCCCCACCAAAATACCCAT +
Preference number: 5 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSYLFEP*PHQNTH
Trigger: ATGGGTATTTTGGTGGGGCAAGGGTTCAAACAGGTA...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACGAATTTCTCCCACTTaGCCATACAGCTCGGTAAGA +
Preference number: 5 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLRISPT*PYSSVR
Trigger: TCTTACCGAGCTGTATGGCAAAGTGGGAGAAATTCG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCCTGCTGTATTTATCTTaGCTGAATACAGACGCTTCA +
Preference number: 5 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRLLYLS*LNTDAS
Trigger: TGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAG...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp AGTAGAGCACCTATAGACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTCCTTCAAAATGGTCTaGATTTCTTCTGTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: SRAPIDWTAVFIFAEYRRSFKMV*ISSVSA
Trigger: AGCTGAAACAGAAGAAATCAAGACCATTTTGAAGGA...GCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTCTATAGGTGCTCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTAACCAAAATACCCATCTaGCATTTTTCGGAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLTKIPI*HFSECC
Trigger: GCAGCACTCCGAAAAATGCAAGATGGGTATTTTGGT...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTCTGGTTCTGCAAGAATaGTTCAGAGAGTCTCTCATC +
Preference number: 5 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTLVLQE*FRESLI
Trigger: GATGAGAGACTCTCTGAACAATTCTTGCAGAACCAG...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTCTGAGTTTCATTCTATaGTTGCATCCTAGGCTGGAA +
Preference number: 5 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTLSFIL*LHPRLE
Trigger: TTCCAGCCTAGGATGCAACAATAGAATGAAACTCAG...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGATACTTGAATTCAAGCTaGTTCCATCTTCATCAAGCA +
Preference number: 5 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRYLNSS*FHLHQA
Trigger: TGCTTGATGAAGATGGAACAAGCTTGAATTCAAGTA...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GCAAAAAGGGAAGTTAACAGAGTCTCTGCACAATTCAGAAGAAGGAGAGTTAGATTTGCTGTCCTCTCTTaGTTTCTACTATCTGTATTC +
Preference number: 5 (lower is better)
Translates to: AKREVNRVSAQFRRRRVRFAVLS*FLLSVF
Trigger: GAATACAGATAGTAGAAACAAAGAGAGGACAGCAAA...TCTAACTCTCCTTCTTCTGAATTGTGCAGAGACTCTGTTAACTTCCCTTTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTTTCTGTTGCCATAACTaGTATGATCAGACCAATTCG +
Preference number: 5 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTFCCHN*YDQTNS
Trigger: CGAATTGGTCTGATCATACAAGTTATGGCAACAGAA...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp GACTGGACTGCTGTATTTATCTTTGCTGAATACAGACGCTTCAAATTATTGTCTAGACGCTTCAAATTATaGTCTGTGTTGTGTATTGGC +
Preference number: 5 (lower is better)
Translates to: DWTAVFIFAEYRRFKLLSRRFKL*SVLCIG
Trigger: GCCAATACACAACACAGACAATAATTTGAAGCGTCT...AGACAATAATTTGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAGTCCAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTAGACGCTTCAAATTATaGTCTGTGTTGTGTATTGGC +
Preference number: 5 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTRRFKL*SVLCIG
Trigger: GCCAATACACAACACAGACAATAATTTGAAGCGTCT...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTACTGCTGTATTTATCTTaGCTGAATACAGACGCTTCA +
Preference number: 5 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLLLYLS*LNTDAS
Trigger: TGAAGCGTCTGTATTCAGCAAAGATAAATACAGCAG...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 90 bp ACATGTGAACATCATGACTGGTTGAATCATAATCATTCATCCAGTTaGCAGATTCCAGGTAATCATAGTTGTCATCATAATCTTCACTGT +
Preference number: 5 (lower is better)
Translates to: TCEHHDWLNHNHSSS*QIPGNHSCHHNLHC
Trigger: ACAGTGAAGATTATGATGACAACTATGATTACCTGGAATCTGGCAACTGGATGAATGATTATGATTCAACCAGTCATGATGTTCACATGT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTATCCTTCAAAATGGTCTaGATTTCTTCTGTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLSFKMV*ISSVSA
Trigger: AGCTGAAACAGAAGAAATCAAGACCATTTTGAAGGA...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp ATAAGAAACAGACATATGCCCACAGATACCATGATATACAGGGATATGTACACTTACTTGAATTCAAGCTaGTTCCATCTTCATCAAGCA +
Preference number: 5 (lower is better)
Translates to: IRNRHMPTDTMIYRDMYTYLNSS*FHLHQA
Trigger: TGCTTGATGAAGATGGAACAAGCTTGAATTCAAGTA...AGTGTACATATCCCTGTATATCATGGTATCTGTGGGCATATGTCTGTTTCTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS-3UTR CAA 90 bp CTTATACACACACACACACACACACACACATACACACACAAATATGTGTCTTTATTTGCTGTCCTCTCTTaGTTTCTACTATCTGTATTC +
Preference number: 5 (lower is better)
Translates to: LIHTHTHTHTYTHKYVSLFAVLS*FLLSVF
Trigger: GAATACAGATAGTAGAAACAAAGAGAGGACAGCAAA...TAAAGACACATATTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339490.7
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 72 bp GCTGTGGGGCAGGAACTCCTGCACGTAGGTGGCGGCTaGCTTGGAGAGGTAGGTCATGGTGCCAAACCTGCC +
Preference number: 6 (lower is better)
Translates to: AVGQELLHVGGG*LGEVGHGAKPA
Trigger: GGCAGGTTTGGCACCATGACCTACCTCTCCAAGGCAGCCGCCACCTACGTGCAGGAGTTCCTGCCCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 72 bp AAGCCAGGAACCAAAGCCCTCATTGCATGGCACAGATaGTGTGGGGCAGGAACTCCTGCACGTAGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: KPGTKALIAWHR*CGAGTPARRWR
Trigger: CCGCCACCTACGTGCAGGAGTTCCTGCCCCACAGCATCTGTGCCATGCAATGAGGGCTTTGGTTCCTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 72 bp CGGCTGCCTTGGAGAGGTAGGTCATGGTGCCAAACCTaGCACTGGGTGCACTGTCATACAGAAGAGTACAGA +
Preference number: 6 (lower is better)
Translates to: RLPWRGRSWCQT*HWVHCHTEEYR
Trigger: TCTGTACTCTTCTGTATGACAGTGCACCCAGTGGCAGGTTTGGCACCATGACCTACCTCTCCAAGGCAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 72 bp GCCTTGGTCACCAAGGACATTAAGTCGCAGGTTGTTTaGACAGCAGCTTGGAACCGATCTAGCCCTCCCTTC +
Preference number: 6 (lower is better)
Translates to: ALVTKDIKSQVV*TAAWNRSSPPF
Trigger: GAAGGGAGGGCTAGATCGGTTCCAAGCTGCTGTGCAAACAACCTGCGACTTAATGTCCTTGGTGACCAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS GCA 72 bp GGAGAGGTAGGTCATGGTGCCAAACCTGCCACTGGGTaGACTGTCATACAGAAGAGTACAGATGCCAGATGC +
Preference number: 6 (lower is better)
Translates to: GEVGHGAKPATG*TVIQKSTDARC
Trigger: GCATCTGGCATCTGTACTCTTCTGTATGACAGTGCACCCAGTGGCAGGTTTGGCACCATGACCTACCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 72 bp CCTTGGAGAGGTAGGTCATGGTGCCAAACCTGCCACTaGGTGCACTGTCATACAGAAGAGTACAGATGCCAG +
Preference number: 6 (lower is better)
Translates to: PWRGRSWCQTCH*VHCHTEEYRCQ
Trigger: CTGGCATCTGTACTCTTCTGTATGACAGTGCACCCAGTGGCAGGTTTGGCACCATGACCTACCTCTCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CAA 72 bp CCTTGGCCTTGGTCACCAAGGACATTAAGTCGCAGGTaGTTTGCACAGCAGCTTGGAACCGATCTAGCCCTC +
Preference number: 6 (lower is better)
Translates to: PWPWSPRTLSRR*FAQQLGTDLAL
Trigger: GAGGGCTAGATCGGTTCCAAGCTGCTGTGCAAACAACCTGCGACTTAATGTCCTTGGTGACCAAGGCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS CAA 90 bp CATGCAGTTCCTTGGCCTTGGTCACCAAGGACATTAAGTCGCAGGTaGTTTGCACAGCAGCTTGGAACCGATCTAGCCCTCCCTTCTGTG +
Preference number: 6 (lower is better)
Translates to: HAVPWPWSPRTLSRR*FAQQLGTDLALPSV
Trigger: CACAGAAGGGAGGGCTAGATCGGTTCCAAGCTGCTGTGCAAACAACCTGCGACTTAATGTCCTTGGTGACCAAGGCCAAGGAACTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS GCA 72 bp GGGTGCACTGTCATACAGAAGAGTACAGATGCCAGATaGGGGATCCTTTGCCAACATGGTATCATCTGCGCC +
Preference number: 6 (lower is better)
Translates to: GCTVIQKSTDAR*GILCQHGIICA
Trigger: GGCGCAGATGATACCATGTTGGCAAAGGATCCCGCATCTGGCATCTGTACTCTTCTGTATGACAGTGCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 72 bp CCTGTCAGGAGGAACACTGTACAGCTCTGGCAGAAGTaGGACTCCATTTTTGCCCTTGATGAGGACTGCTTC +
Preference number: 6 (lower is better)
Translates to: PVRRNTVQLWQK*DSIFALDEDCF
Trigger: GAAGCAGTCCTCATCAAGGGCAAAAATGGAGTCCCACTTCTGCCAGAGCTGTACAGTGTTCCTCCTGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 72 bp AAGGACATTAAGTCGCAGGTTGTTTGCACAGCAGCTTaGAACCGATCTAGCCCTCCCTTCTGTGAGGTAGGG +
Preference number: 6 (lower is better)
Translates to: KDIKSQVVCTAA*NRSSPPFCEVG
Trigger: CCCTACCTCACAGAAGGGAGGGCTAGATCGGTTCCAAGCTGCTGTGCAAACAACCTGCGACTTAATGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS CCA 72 bp CCCTCTGTGGCTTCCTCAGCTGAGCATCGAAGGGAGTaGGCCAGTTCTGTTGCCATAACTTGTATGATCAGA +
Preference number: 6 (lower is better)
Translates to: PSVASSAEHRRE*ASSVAITCMIR
Trigger: TCTGATCATACAAGTTATGGCAACAGAACTGGCCCACTCCCTTCGATGCTCAGCTGAGGAAGCCACAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 72 bp TTCATCGACCCTGTCAGGAGGAACACTGTACAGCTCTaGCAGAAGTGGGACTCCATTTTTGCCCTTGATGAG +
Preference number: 6 (lower is better)
Translates to: FIDPVRRNTVQL*QKWDSIFALDE
Trigger: CTCATCAAGGGCAAAAATGGAGTCCCACTTCTGCCAGAGCTGTACAGTGTTCCTCCTGACAGGGTCGATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS TCA 72 bp GCAGTGCTGTACTTCATCAGCCAGGACATGGATAACTaGTTGAGGCCCACCTTTCACACCAAACAGATCCAG +
Preference number: 6 (lower is better)
Translates to: AVLYFISQDMDN*LRPTFHTKQIQ
Trigger: CTGGATCTGTTTGGTGTGAAAGGTGGGCCTCAATCAGTTATCCATGTCCTGGCTGATGAAGTACAGCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 72 bp TGCCACTGGGTGCACTGTCATACAGAAGAGTACAGATaGCAGATGCGGGATCCTTTGCCAACATGGTATCAT +
Preference number: 6 (lower is better)
Translates to: CHWVHCHTEEYR*QMRDPLPTWYH
Trigger: ATGATACCATGTTGGCAAAGGATCCCGCATCTGGCATCTGTACTCTTCTGTATGACAGTGCACCCAGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 72 bp GGGCAGAGGTGCAGAGATAGTCTTTTCTCGAGGTTCTaGAGGAAGTCCTACTGTCAAATGTTTCTGGTGGGA +
Preference number: 6 (lower is better)
Translates to: GQRCRDSLFSRF*RKSYCQMFLVG
Trigger: TCCCACCAGAAACATTTGACAGTAGGACTTCCTCCAGAACCTCGAGAAAAGACTATCTCTGCACCTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS TCA 72 bp CTTAAGATCCCAGAAATGTATCGGATCAGGCCCCAGTaGCGAATTTCTCCCACTTTGCCATACAGCTCGGTA +
Preference number: 6 (lower is better)
Translates to: LKIPEMYRIRPQ*RISPTLPYSSV
Trigger: TACCGAGCTGTATGGCAAAGTGGGAGAAATTCGTCACTGGGGCCTGATCCGATACATTTCTGGGATCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS TCA 72 bp TTCCGATGCTATGAATTTCAATATCTGCCAGCATGGTaGGGACAAGGATGGCTTCAACCAGCAGCTGACGGT +
Preference number: 6 (lower is better)
Translates to: FRCYEFQYLPAW*GQGWLQPAADG
Trigger: ACCGTCAGCTGCTGGTTGAAGCCATCCTTGTCCTCACCATGCTGGCAGATATTGAAATTCATAGCATCGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 72 bp ATACAGAAGAGTACAGATGCCAGATGCGGGATCCTTTaGCAACATGGTATCATCTGCGCCAAGGGTTTTCTG +
Preference number: 6 (lower is better)
Translates to: IQKSTDARCGIL*QHGIICAKGFL
Trigger: CAGAAAACCCTTGGCGCAGATGATACCATGTTGGCAAAGGATCCCGCATCTGGCATCTGTACTCTTCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CAA 72 bp CATACAGAAGAGTACAGATGCCAGATGCGGGATCCTTaGCCAACATGGTATCATCTGCGCCAAGGGTTTTCT +
Preference number: 6 (lower is better)
Translates to: HTEEYRCQMRDP*PTWYHLRQGFS
Trigger: AGAAAACCCTTGGCGCAGATGATACCATGTTGGCAAAGGATCCCGCATCTGGCATCTGTACTCTTCTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS TCA 72 bp TGCTGTACTTCATCAGCCAGGACATGGATAACTGATTaGGGCCCACCTTTCACACCAAACAGATCCAGTTCA +
Preference number: 6 (lower is better)
Translates to: CCTSSARTWITD*GPPFTPNRSSS
Trigger: TGAACTGGATCTGTTTGGTGTGAAAGGTGGGCCTCAATCAGTTATCCATGTCCTGGCTGATGAAGTACAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS TCA 72 bp TCGGCGTTGCCATTGACCTTGACGACTATCTTTAGATaGCTGCTGATCATATGCACTAGGAAAGGACCCACT +
Preference number: 6 (lower is better)
Translates to: SALPLTLTTIFR*LLIICTRKGPT
Trigger: AGTGGGTCCTTTCCTAGTGCATATGATCAGCAGTCATCTAAAGATAGTCGTCAAGGTCAATGGCAACGCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 72 bp AGCAATGATGCTTCCGATGCTATGAATTTCAATATCTaGCAGCATGGTGAGGACAAGGATGGCTTCAACCAG +
Preference number: 6 (lower is better)
Translates to: SNDASDAMNFNI*QHGEDKDGFNQ
Trigger: CTGGTTGAAGCCATCCTTGTCCTCACCATGCTGGCAGATATTGAAATTCATAGCATCGGAAGCATCATTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 72 bp GAAGATACATGTGAACATTCTGTACATGCAGTTCCTTaGCCTTGGTCACCAAGGACATTAAGTCGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: EDTCEHSVHAVP*PWSPRTLSRRL
Trigger: CAACCTGCGACTTAATGTCCTTGGTGACCAAGGCCAAGGAACTGCATGTACAGAATGTTCACATGTATCTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS CAA 72 bp TACAGCTCTGGCAGAAGTGGGACTCCATTTTTGCCCTaGATGAGGACTGCTTCAAGAGCCTCTTTATATTCT +
Preference number: 6 (lower is better)
Translates to: YSSGRSGTPFLP*MRTASRASLYS
Trigger: AGAATATAAAGAGGCTCTTGAAGCAGTCCTCATCAAGGGCAAAAATGGAGTCCCACTTCTGCCAGAGCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CAA 72 bp GCATCGAAGGGAGTGGGCCAGTTCTGTTGCCATAACTaGTATGATCAGACCAATTCGAAGTCGAAACATTTC +
Preference number: 6 (lower is better)
Translates to: ASKGVGQFCCHN*YDQTNSKSKHF
Trigger: GAAATGTTTCGACTTCGAATTGGTCTGATCATACAAGTTATGGCAACAGAACTGGCCCACTCCCTTCGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS TCA 72 bp CCCATCTTGCATTTTTCGGAGTGCTGCCAGGATACTTaGATTCAAGCTTGTTCCATCTTCATCAAGCATGCT +
Preference number: 6 (lower is better)
Translates to: PILHFSECCQDT*IQACSIFIKHA
Trigger: AGCATGCTTGATGAAGATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCACTCCGAAAAATGCAAGATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 72 bp CAGAAGTGGGACTCCATTTTTGCCCTTGATGAGGACTaGTTCAAGAGCCTCTTTATATTCTTGAACCTGTTC +
Preference number: 6 (lower is better)
Translates to: QKWDSIFALDED*FKSLFIFLNLF
Trigger: GAACAGGTTCAAGAATATAAAGAGGCTCTTGAAGCAGTCCTCATCAAGGGCAAAAATGGAGTCCCACTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CCA 72 bp CGTTCTGTTTTGGTTGCTCCAACAGCACCAATCTCGTaGATAGAAATAGCAGGACTGACATTTGAATCAGTG +
Preference number: 6 (lower is better)
Translates to: RSVLVAPTAPIS*IEIAGLTFESV
Trigger: CACTGATTCAAATGTCAGTCCTGCTATTTCTATCCACGAGATTGGTGCTGTTGGAGCAACCAAAACAGAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CAA 72 bp TTTTTCGGAGTGCTGCCAGGATACTTGAATTCAAGCTaGTTCCATCTTCATCAAGCATGCTGTGTGAGATGG +
Preference number: 6 (lower is better)
Translates to: FFGVLPGYLNSS*FHLHQACCVRW
Trigger: CCATCTCACACAGCATGCTTGATGAAGATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCACTCCGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CAA 72 bp ACCCATCTTGCATTTTTCGGAGTGCTGCCAGGATACTaGAATTCAAGCTTGTTCCATCTTCATCAAGCATGC +
Preference number: 6 (lower is better)
Translates to: THLAFFGVLPGY*NSSLFHLHQAC
Trigger: GCATGCTTGATGAAGATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCACTCCGAAAAATGCAAGATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CAA 90 bp CACCAAAATACCCATCTTGCATTTTTCGGAGTGCTGCCAGGATACTaGAATTCAAGCTTGTTCCATCTTCATCAAGCATGCTGTGTGAGA +
Preference number: 6 (lower is better)
Translates to: HQNTHLAFFGVLPGY*NSSLFHLHQACCVR
Trigger: TCTCACACAGCATGCTTGATGAAGATGGAACAAGCTTGAATTCAAGTATCCTGGCAGCACTCCGAAAAATGCAAGATGGGTATTTTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS TCA 72 bp TTCCAGGTGACTGCTTTATCTCACTTTTTAACTGCATaGTCCCAGTTCGTTCTGTTTTGGTTGCTCCAACAG +
Preference number: 6 (lower is better)
Translates to: FQVTALSHFLTA*SQFVLFWLLQQ
Trigger: CTGTTGGAGCAACCAAAACAGAACGAACTGGGATCATGCAGTTAAAAAGTGAGATAAAGCAGTCACCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339490.7
ENST00000541944.5
CDS CAA 72 bp TCACTTTTTAACTGCATGATCCCAGTTCGTTCTGTTTaGGTTGCTCCAACAGCACCAATCTCGTGGATAGAA +
Preference number: 6 (lower is better)
Translates to: SLFNCMIPVRSV*VAPTAPISWIE
Trigger: TTCTATCCACGAGATTGGTGCTGTTGGAGCAACCAAAACAGAACGAACTGGGATCATGCAGTTAAAAAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS CAA 90 bp TGCTTTATCTCACTTTTTAACTGCATGATCCCAGTTCGTTCTGTTTaGGTTGCTCCAACAGCACCAATCTCGTGGATAGAAATAGCAGGA +
Preference number: 6 (lower is better)
Translates to: CFISLFNCMIPVRSV*VAPTAPISWIEIAG
Trigger: TCCTGCTATTTCTATCCACGAGATTGGTGCTGTTGGAGCAACCAAAACAGAACGAACTGGGATCATGCAGTTAAAAAGTGAGATAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS TCA 72 bp GAAATTCCACCTGCTTTATCTCACTTTTTAACTGCATaGTCCCAGTTCGTTCTGTTTTGGTTGCTCCAACAG +
Preference number: 6 (lower is better)
Translates to: EIPPALSHFLTA*SQFVLFWLLQQ
Trigger: CTGTTGGAGCAACCAAAACAGAACGAACTGGGATCATGCAGTTAAAAAGTGAGATAAAGCAGGTGGAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
CDS CCA 72 bp ATTCGAAGTCGAAACATTTCAGCAAAGAGGCCAGGCTaGGTTCGCATATACATGGCTAGATATACCATTATT +
Preference number: 6 (lower is better)
Translates to: IRSRNISAKRPG*VRIYMARYTII
Trigger: AATAATGGTATATCTAGCCATGTATATGCGAACCCAGCCTGGCCTCTTTGCTGAAATGTTTCGACTTCGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
ENST00000373545.7
ENST00000541944.5
CDS GCA 72 bp GAGCATGACTGGTTGAATCATAATCATTCATCCAGTTaGCAGATTCCAGGTAATCATAGTTGTCATCATAAT +
Preference number: 6 (lower is better)
Translates to: EHDWLNHNHSSS*QIPGNHSCHHN
Trigger: ATTATGATGACAACTATGATTACCTGGAATCTGGCAACTGGATGAATGATTATGATTCAACCAGTCATGCTC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339490.7
ENST00000373539.3
ENST00000373542.9
CDS GCA 72 bp CATCATGACTGGTTGAATCATAATCATTCATCCAGTTaGCAGATTCCAGGTAATCATAGTTGTCATCATAAT +
Preference number: 6 (lower is better)
Translates to: HHDWLNHNHSSS*QIPGNHSCHHN
Trigger: ATTATGATGACAACTATGATTACCTGGAATCTGGCAACTGGATGAATGATTATGATTCAACCAGTCATGATG
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373545.7
ENST00000541944.5