Pregenerated sensors for PHF5A (Homo sapiens)

Ensembl gene IDs: ENSG00000100410

Ensembl transcript IDs: ENST00000459687.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	ACTCAAAGCCCTCTTTGTGGCACTTTTGCTGGTTCCACAGAAAACTaGGAGTGGGAAGGGTGGGTTGTTGGGACGGTGTGTTCCACTCAC	+
Preference number: 5 (lower is better) Translates to: TQSPLCGTFAGSTEN*EWEGWVVGTVCSTH Trigger: GTGAGTGGAACACACCGTCCCAACAACCCACCCTTCCCACTCCCAGTTTTCTGTGGAACCAGCAAAAGTGCCACAAAGAGGGCTTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459687.5
CDS CCA 90 bp	ACTTCCAGGCACATCTACTCAAAGCCCTCTTTGTGGCACTTTTGCTaGTTCCACAGAAAACTGGGAGTGGGAAGGGTGGGTTGTTGGGAC	+
Preference number: 5 (lower is better) Translates to: TSRHIYSKPSLWHFC*FHRKLGVGRVGCWD Trigger: GTCCCAACAACCCACCCTTCCCACTCCCAGTTTTCTGTGGAACCAGCAAAAGTGCCACAAAGAGGGCTTTGAGTAGATGTGCCTGGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459687.5
CDS GCA 90 bp	ATCACTTCCAGGCACATCTACTCAAAGCCCTCTTTGTGGCACTTTTaGTGGTTCCACAGAAAACTGGGAGTGGGAAGGGTGGGTTGTTGG	+
Preference number: 5 (lower is better) Translates to: ITSRHIYSKPSLWHF*WFHRKLGVGRVGCW Trigger: CCAACAACCCACCCTTCCCACTCCCAGTTTTCTGTGGAACCAGCAAAAGTGCCACAAAGAGGGCTTTGAGTAGATGTGCCTGGAAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459687.5
CDS CCA 72 bp	CCTCTTTGTGGCACTTTTGCTGGTTCCACAGAAAACTaGGAGTGGGAAGGGTGGGTTGTTGGGACGGTGTGT	+
Preference number: 6 (lower is better) Translates to: PLCGTFAGSTEN*EWEGWVVGTVC Trigger: ACACACCGTCCCAACAACCCACCCTTCCCACTCCCAGTTTTCTGTGGAACCAGCAAAAGTGCCACAAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459687.5
CDS CAA 90 bp	CATCACTTCCAGGCACATCTACTCAAAGCCCTCTTTGTGGCACTTTaGCTGGTTCCACAGAAAACTGGGAGTGGGAAGGGTGGGTTGTTG	+
Preference number: 6 (lower is better) Translates to: HHFQAHLLKALFVAL*LVPQKTGSGKGGLL Trigger: CAACAACCCACCCTTCCCACTCCCAGTTTTCTGTGGAACCAGCAAAAGTGCCACAAAGAGGGCTTTGAGTAGATGTGCCTGGAAGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000459687.5
CDS CAA 90 bp	CACACACTTGCCATCACTTCCAGGCACATCTACTCAAAGCCCTCTTaGTGGCACTTTTGCTGGTTCCACAGAAAACTGGGAGTGGGAAGG	+
Preference number: 6 (lower is better) Translates to: HTLAITSRHIYSKPS*WHFCWFHRKLGVGR Trigger: CCTTCCCACTCCCAGTTTTCTGTGGAACCAGCAAAAGTGCCACAAAGAGGGCTTTGAGTAGATGTGCCTGGAAGTGATGGCAAGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459687.5
CDS GCA 72 bp	AGGCACATCTACTCAAAGCCCTCTTTGTGGCACTTTTaGTGGTTCCACAGAAAACTGGGAGTGGGAAGGGTG	+
Preference number: 6 (lower is better) Translates to: RHIYSKPSLWHF*WFHRKLGVGRV Trigger: CACCCTTCCCACTCCCAGTTTTCTGTGGAACCAGCAAAAGTGCCACAAAGAGGGCTTTGAGTAGATGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459687.5
CDS CAA 72 bp	CAGGCACATCTACTCAAAGCCCTCTTTGTGGCACTTTaGCTGGTTCCACAGAAAACTGGGAGTGGGAAGGGT	+
Preference number: 6 (lower is better) Translates to: QAHLLKALFVAL*LVPQKTGSGKG Trigger: ACCCTTCCCACTCCCAGTTTTCTGTGGAACCAGCAAAAGTGCCACAAAGAGGGCTTTGAGTAGATGTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000459687.5
CDS CCA 72 bp	TTCCACAGAAAACTGGGAGTGGGAAGGGTGGGTTGTTaGGACGGTGTGTTCCACTCACATTTTTCACACAGT	+
Preference number: 6 (lower is better) Translates to: FHRKLGVGRVGC*DGVFHSHFSHS Trigger: ACTGTGTGAAAAATGTGAGTGGAACACACCGTCCCAACAACCCACCCTTCCCACTCCCAGTTTTCTGTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000459687.5