RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PHACTR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000112137

Ensembl transcript IDs: ENST00000332995.12, ENST00000379329.1, ENST00000379335.8, ENST00000379348.3, ENST00000379350.5, ENST00000406205.7, ENST00000434977.1, ENST00000481706.1, ENST00000482982.2, ENST00000489548.1, ENST00000674595.1, ENST00000674637.1, ENST00000674953.1, ENST00000675203.1, ENST00000676159.1, ENST00000676234.1

Found 884 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTaGTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTG +
Preference number: 1 (lower is better)
Translates to: GQGPFHLPDSLQSGP*WCPWHCRGLGCILV
Trigger: CACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR GCA 90 bp GGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTaGCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAA +
Preference number: 1 (lower is better)
Translates to: GPFHLPDSLQSGPCW*PWHCRGLGCILVSE
Trigger: TTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 90 bp CAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTaGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCA +
Preference number: 1 (lower is better)
Translates to: QGPFHLPDSLQSGPC*CPWHCRGLGCILVS
Trigger: TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 90 bp CAGAGCTTCCTGAAAGGCAGCTCAGCTCAGGCAGAGGGAGCAGGATaGGTGCTCAGTGCCAGCCTTCGTAGCCAAGAGGCAGCCAGACTC +
Preference number: 1 (lower is better)
Translates to: QSFLKGSSAQAEGAG*VLSASLRSQEAARL
Trigger: GAGTCTGGCTGCCTCTTGGCTACGAAGGCTGGCACTGAGCACCCATCCTGCTCCCTCTGCCTGAGCTGAGCTGCCTTTCAGGAAGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 90 bp TTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCCCTTaGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGA +
Preference number: 1 (lower is better)
Translates to: FHLPDSLQSGPCWCP*HCRGLGCILVSEVG
Trigger: TCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 90 bp TGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTaGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAG +
Preference number: 1 (lower is better)
Translates to: CEEEVCWRLHEGSAC*AWLERTRTVPPARQ
Trigger: CTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 90 bp CACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTaGGGCAGCCCTGGTGGCCTCCACCTCCTGCCATCAGCCTGGATC +
Preference number: 1 (lower is better)
Translates to: HRSTTEHTPGFESFI*GSPGGLHLLPSAWI
Trigger: GATCCAGGCTGATGGCAGGAGGTGGAGGCCACCAGGGCTGCCCCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR GCA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTaGTGGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGA +
Preference number: 1 (lower is better)
Translates to: TCEEEVCWRLHEGSA*WAWLERTRTVPPAR
Trigger: TCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR GCA 90 bp TCCAATCTCCCATCTTCAGGGAGGTTCTTGACCGTGAGAGGGAGGTaGGAGCTTCCCACCGTCATCCCCACAGGAGTACCACTGAACACA +
Preference number: 1 (lower is better)
Translates to: SNLPSSGRFLTVRGR*ELPTVIPTGVPLNT
Trigger: TGTGTTCAGTGGTACTCCTGTGGGGATGACGGTGGGAAGCTCGCACCTCCCTCTCACGGTCAAGAACCTCCCTGAAGATGGGAGATTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR CCA 90 bp AGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTaGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCA +
Preference number: 1 (lower is better)
Translates to: RFAGDFMKVVPAGPG*RGQGPFHLPDSLQS
Trigger: TGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTaGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCA +
Preference number: 1 (lower is better)
Translates to: EEVCWRLHEGSACWA*LERTRTVPPARQSS
Trigger: TGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 90 bp AGTGCCAGCCTTCGTAGCCAAGAGGCAGCCAGACTCCCCCAGAAATaGGCCCTTCCCTTTTGTTCATTGTGTGGGTGGTGGCTGAAAGGA +
Preference number: 1 (lower is better)
Translates to: SASLRSQEAARLPQK*ALPFCSLCGWWLKG
Trigger: TCCTTTCAGCCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTTCTGGGGGAGTCTGGCTGCCTCTTGGCTACGAAGGCTGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 90 bp GCCCGGGCCATCTGTGTTCCACTTCCTCGTTTCAGTAACCTAAAGTaGAACCGCATGCCTGCCTTCCTACTATCTTCCCTCTCATGGCAC +
Preference number: 1 (lower is better)
Translates to: ARAICVPLPRFSNLK*NRMPAFLLSSLSWH
Trigger: GTGCCATGAGAGGGAAGATAGTAGGAAGGCAGGCATGCGGTTCCACTTTAGGTTACTGAAACGAGGAAGTGGAACACAGATGGCCCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR GCA 90 bp AGCTTTCTTTGGACTCAGATGACAGACACTTGTGAGGAAGAGGTTTaGTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAG +
Preference number: 1 (lower is better)
Translates to: SFLWTQMTDTCEEEV*WRLHEGSACWAWLE
Trigger: CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGTGTCTGTCATCTGAGTCCAAAGAAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 90 bp TTTCTTTGGACTCAGATGACAGACACTTGTGAGGAAGAGGTTTGCTaGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGG +
Preference number: 1 (lower is better)
Translates to: FLWTQMTDTCEEEVC*RLHEGSACWAWLER
Trigger: CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGTGTCTGTCATCTGAGTCCAAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 90 bp GAATGTCAGGGAATAACAGAAGTGGTCCACTTTGGAAGTCCCGTGTaGATGTGGTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGC +
Preference number: 1 (lower is better)
Translates to: ECQGITEVVHFGSPV*MWYFVQVWPLLTGC
Trigger: GCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCACATCCACACGGGACTTCCAAAGTGGACCACTTCTGTTATTCCCTGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR CCA 90 bp GGACTGTCAGGGAGAATGTCAGGGAATAACAGAAGTGGTCCACTTTaGAAGTCCCGTGTGGATGTGGTATTTTGTTCAGGTTTGGCCTCT +
Preference number: 1 (lower is better)
Translates to: GLSGRMSGNNRSGPL*KSRVDVVFCSGLAS
Trigger: AGAGGCCAAACCTGAACAAAATACCACATCCACACGGGACTTCCAAAGTGGACCACTTCTGTTATTCCCTGACATTCTCCCTGACAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR CCA 90 bp CAGGGAATAACAGAAGTGGTCCACTTTGGAAGTCCCGTGTGGATGTaGTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTG +
Preference number: 1 (lower is better)
Translates to: QGITEVVHFGSPVWM*YFVQVWPLLTGCKL
Trigger: CAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCACATCCACACGGGACTTCCAAAGTGGACCACTTCTGTTATTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR CCA 90 bp TTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTaGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCAT +
Preference number: 1 (lower is better)
Translates to: FLASTSKGPQTKCHV*SQYIWPSVEVQPDH
Trigger: ATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 90 bp GTCCACTTTGGAAGTCCCGTGTGGATGTGGTATTTTGTTCAGGTTTaGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCTTTTCTCCT +
Preference number: 1 (lower is better)
Translates to: VHFGSPVWMWYFVQV*PLLTGCKLATIFSP
Trigger: AGGAGAAAAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCACATCCACACGGGACTTCCAAAGTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR TCA 90 bp GAAGTCCCGTGTGGATGTGGTATTTTGTTCAGGTTTGGCCTCTGCTaGCTGGTTGCAAATTGGCAACAATCTTTTCTCCTTGACCTAAGT +
Preference number: 1 (lower is better)
Translates to: EVPCGCGILFRFGLC*LVANWQQSFLLDLS
Trigger: ACTTAGGTCAAGGAGAAAAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCACATCCACACGGGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR CAA 90 bp GGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTaGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCA +
Preference number: 2 (lower is better)
Translates to: GPCWCPWHCRGLGCI*VSEVGPAARTAEPS
Trigger: TGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR GCA 90 bp GAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGTCAGGGCCCTGCTGGTaGCCTTGGCACTGCCGGGGG +
Preference number: 2 (lower is better)
Translates to: EEEVCWRLHEGSACWAWLSGPCW*PWHCRG
Trigger: CCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGA...CAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CAA 90 bp GTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCCCTaGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: VPPARQSSVRALLVP*ALPGVGMHFGVRSG
Trigger: CCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR GCA 90 bp GCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTTGGTGCCCTTGGCACTaGCGGGGGTTGGGATGCATT +
Preference number: 2 (lower is better)
Translates to: AGEDKDRSTCQTVFSQGPWCPWH*RGLGCI
Trigger: AATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCA...AGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR GCA 90 bp AAATGGGCCCTTCCCTTTTGTTCATTGTGTGGGTGGTGGCTGAAAGGAGGGAAATCAGGGCCCTGCTGGTaGCCTTGGCACTGCCGGGGG +
Preference number: 2 (lower is better)
Translates to: KWALPFCSLCGWWLKGGKSGPCW*PWHCRG
Trigger: CCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGA...TTTCCCTCCTTTCAGCCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CCA 90 bp GGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCGGTTGGGATGCATTTTaGTGTCAGAAGTGGGACCAG +
Preference number: 2 (lower is better)
Translates to: GQGPFHLPDSLQSGPCWCGWDAF*CQKWDQ
Trigger: CTGGTCCCACTTCTGACACCAAAATGCATCCCAACC...GCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CCA 90 bp GTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGACAGGCACTGCCGGGGGTTaGGATGCATTTTGGTGTCAG +
Preference number: 2 (lower is better)
Translates to: VCWRLHEGSACWAWLERTGTAGG*DAFWCQ
Trigger: CTGACACCAAAATGCATCCCAACCCCCGGCAGTGCC...TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CAA 90 bp AGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGGGAGGTTCTaGACCGTGAGAGGGAGGTGCGAGCTTCCCACCGTCATCCCCACA +
Preference number: 2 (lower is better)
Translates to: RCRIQQSNLPSSGRF*TVRGRCELPTVIPT
Trigger: TGTGGGGATGACGGTGGGAAGCTCGCACCTCCCTCTCACGGTCAAGAACCTCCCTGAAGATGGGAGATTGGACTGTTGAATCCTGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR GCA 90 bp TGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATTCAGGGCCCTGCTGGTaGCCTTGGCACTGCCGGGGG +
Preference number: 2 (lower is better)
Translates to: CHVWSQYIWPSVEVQPDHSGPCW*PWHCRG
Trigger: CCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGA...ATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAGACATGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR GCA 90 bp AGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGTGCCGGGGGTTGGGATaGATTTTGGTGTCAGAAGTG +
Preference number: 2 (lower is better)
Translates to: RKRFAGDFMKVVPAGPGWCRGLG*ILVSEV
Trigger: CACTTCTGACACCAAAATGCATCCCAACCCCCGGCA...CCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CCA 90 bp GAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGGGTTGGGATGCATTTTaGTGTCAGAAGTGGGACCAG +
Preference number: 2 (lower is better)
Translates to: EVCWRLHEGSACWAWLERGWDAF*CQKWDQ
Trigger: CTGGTCCCACTTCTGACACCAAAATGCATCCCAACC...CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CCA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCGGCACTGCCGGGGGTTaGGATGCATTTTGGTGTCAG +
Preference number: 2 (lower is better)
Translates to: TCEEEVCWRLHEGSACWAGTAGG*DAFWCQ
Trigger: CTGACACCAAAATGCATCCCAACCCCCGGCAGTGCC...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR GCA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATCATGAAGGTAGTGCCTaGTGGGCCTGGCTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHHEGSA*WAWLER
Trigger: CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATG...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR GCA 90 bp AAATGGGCCCTTCCCTTTTGTTCATTGTGTGGGTGGTGGCTGAAAGGAGGGAAACATGAAGGTAGTGCCTaGTGGGCCTGGCTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: KWALPFCSLCGWWLKGGKHEGSA*WAWLER
Trigger: CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATG...TTTCCCTCCTTTCAGCCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR TCA 90 bp GTCCAATCTCCCATCTTCAGGGAGGTTCTTGACCGTGAGAGGGAGGTGCGAGCTTCCCAAATATCATCATaGTGCTGGACTGTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: VQSPIFREVLDREREVRASQISS*CWTVRE
Trigger: CTCCCTGACAGTCCAGCATCATGATGATATTTGGGA...AGCTCGCACCTCCCTCTCACGGTCAAGAACCTCCCTGAAGATGGGAGATTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR GCA 90 bp AAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGCTTCAGTCAGGGCCCTaGTGGTGCCCTTGGCACTGC +
Preference number: 2 (lower is better)
Translates to: KSQGQLRSVHSFLASTSKLQSGP*WCPWHC
Trigger: GCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAG...CTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CCA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGCTCCTGCCATCAGCCTaGATCCAGCAGCAAGGTGCA +
Preference number: 2 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWLLPSA*IQQQGA
Trigger: TGCACCTTGCTGCTGGATCCAGGCTGATGGCAGGAG...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR CCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCTTTTGGTGTCAGAAGTaGGACCAGCAGCTCGGACCG +
Preference number: 2 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSFWCQK*DQQLGP
Trigger: CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CCA 90 bp GAGCTTCCCACCGTCATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGTATTTTGTTCAGGTTTaGCCTCTGCTGACTGGTTGC +
Preference number: 2 (lower is better)
Translates to: ELPTVIPTGVPLNTHLALYFVQV*PLLTGC
Trigger: GCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATA...CAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATGACGGTGGGAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR TCA 90 bp AAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGGTTTGGCCTCTGCTaGCTGGTTGCAAATTGGCAA +
Preference number: 2 (lower is better)
Translates to: KTKGLPKVQDSTVQSPIFRFGLC*LVANWQ
Trigger: TTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCT...GAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR GCA 90 bp CTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGTGCCGGGGGTTGGGATaGATTTTGGTGTCAGAAGTG +
Preference number: 2 (lower is better)
Translates to: LLLGINFKGPPNQMSCLECRGLG*ILVSEV
Trigger: CACTTCTGACACCAAAATGCATCCCAACCCCCGGCA...CTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR GCA 90 bp ACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCATGCCGGGGGTTGGGATaGATTTTGGTGTCAGAAGTG +
Preference number: 2 (lower is better)
Translates to: TSKGPQTKCHVWSQYIWPCRGLG*ILVSEV
Trigger: CACTTCTGACACCAAAATGCATCCCAACCCCCGGCA...TGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR GCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCAAGGACCGTTCCACCTaGCAGACAGTCTTCAGTCAG +
Preference number: 2 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSKDRST*QTVFSQ
Trigger: CTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTT...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR GCA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATAAGGACCGTTCCACCTaGCAGACAGTCTTCAGTCAG +
Preference number: 2 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHKDRST*QTVFSQ
Trigger: CTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTT...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR TCA 90 bp CAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCGATGACAGACACTTGTaGGGAAGAGGTTTGCTGGAG +
Preference number: 2 (lower is better)
Translates to: QLRSVHSFLASTSKGPQTDDRHL*GRGLLE
Trigger: CTCCAGCAAACCTCTTCCTCACAAGTGTCTGTCATC...GGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR GCA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGATGCCGGGGGTTGGGATaGATTTTGGTGTCAGAAGTG +
Preference number: 2 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGCRGLG*ILVSEV
Trigger: CACTTCTGACACCAAAATGCATCCCAACCCCCGGCA...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CCA 90 bp TCAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTTCAGTAACCTAAAGTaGAACCGCATGCCTGCCTTC +
Preference number: 2 (lower is better)
Translates to: SRPRGCQRCRIQQSNLPSFSNLK*NRMPAF
Trigger: GAAGGCAGGCATGCGGTTCCACTTTAGGTTACTGAA...AGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR CCA 90 bp CTCCATGCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAAAGAAGTGGTCCACTTTaGAAGTCCCGTGTGGATGTG +
Preference number: 2 (lower is better)
Translates to: LHASVFPNIIMMLDCQGERSGPL*KSRVDV
Trigger: CACATCCACACGGGACTTCCAAAGTGGACCACTTCT...TTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR CAA 90 bp GGTCCACTTTGGAAGTCCCGTGTGGATGTGGTATTTTGTTCAGGTTaGGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: GPLWKSRVDVVFCSG*ASADWLQIGNNLFS
Trigger: GGAGAAAAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCACATCCACACGGGACTTCCAAAGTGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR GCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCTGTGAGGAAGAGGTTTaGTGGAGACTTCATGAAGGT +
Preference number: 2 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGCEEEV*WRLHEG
Trigger: ACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACA...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR GCA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTGTGAGGAAGAGGTTTaGTGGAGACTTCATGAAGGT +
Preference number: 2 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHCEEEV*WRLHEG
Trigger: ACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACA...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CCA 90 bp AGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCGAGGAAGAGGTTTGCTaGAGACTTCATGAAGGTAGT +
Preference number: 2 (lower is better)
Translates to: REKPGATEKCSLLLGINFEEEVC*RLHEGS
Trigger: ACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTC...GAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CCA 90 bp CAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCTGGAGCCAGTACATTTaGCCAAGTGTAGAAGTCCAA +
Preference number: 2 (lower is better)
Translates to: QLRSVHSFLASTSKGPQTWSQYI*PSVEVQ
Trigger: TTGGACTTCTACACTTGGCCAAATGTACTGGCTCCA...GGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CCA 90 bp AGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCACCAAATGTCATGTCTaGAGCCAGTACATTTGGCCA +
Preference number: 2 (lower is better)
Translates to: REKPGATEKCSLLLGINFTKCHV*SQYIWP
Trigger: TGGCCAAATGTACTGGCTCCAGACATGACATTTGGT...GAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CCA 90 bp TGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGGGAGGTTCTTGTTGGCCTCTGCTGACTaGTTGCAAATTGGCAACAAT +
Preference number: 2 (lower is better)
Translates to: CQRCRIQQSNLPSSGRFLLASAD*LQIGNN
Trigger: ATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAA...CAAGAACCTCCCTGAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR TCA 90 bp TGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGGGAGGTTCTTGCCCAATCTGTGTCTCTaGGTCTCTAGACTAAATACT +
Preference number: 2 (lower is better)
Translates to: CQRCRIQQSNLPSSGRFLPNLCL*VSRLNT
Trigger: AGTATTTAGTCTAGAGACTCAGAGACACAGATTGGG...CAAGAACCTCCCTGAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR GCA 90 bp GATGCTGGACTGTCAGGGAGAATGTCAGGGAATAACAGAAGTGGTCCACTTTGGGTGAAACTCAGACTTTaGAGAAAGTTGGTTTTAGCC +
Preference number: 2 (lower is better)
Translates to: DAGLSGRMSGNNRSGPLWVKLRL*RKLVLA
Trigger: GGCTAAAACCAACTTTCTGCAAAGTCTGAGTTTCAC...CCAAAGTGGACCACTTCTGTTATTCCCTGACATTCTCCCTGACAGTCCAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR CCA 90 bp ATGATGCTGGACTGTCAGGGAGAATGTCAGGGAATAACAGAAGTGGTCCACTTTAGTCCCGTGTGGATGTaGTATTTTGTTCAGGTTTGG +
Preference number: 2 (lower is better)
Translates to: MMLDCQGECQGITEVVHFSPVWM*YFVQVW
Trigger: CCAAACCTGAACAAAATACCACATCCACACGGGACT...AAAGTGGACCACTTCTGTTATTCCCTGACATTCTCCCTGACAGTCCAGCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR CCA 90 bp TTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATGTCAGGGAATAACATTTGGAAGTCCCGTGTaGATGTGGTATTTTGTTCAG +
Preference number: 2 (lower is better)
Translates to: FPNIIMMLDCQGECQGITFGSPV*MWYFVQ
Trigger: CTGAACAAAATACCACATCCACACGGGACTTCCAAA...TGTTATTCCCTGACATTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR GCA 72 bp CCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTaGTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGC +
Preference number: 3 (lower is better)
Translates to: PFHLPDSLQSGP*WCPWHCRGLGC
Trigger: GCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR GCA 72 bp CCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATaGATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGG +
Preference number: 3 (lower is better)
Translates to: PCWCPWHCRGLG*ILVSEVGPAAR
Trigger: CCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 72 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTaGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAG +
Preference number: 3 (lower is better)
Translates to: QGPAGALGTAGG*DAFWCQKWDQQ
Trigger: CTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR GCA 72 bp CACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTaGCCTTGGCACTGCCGGGGGTTGGGATGCATTTTG +
Preference number: 3 (lower is better)
Translates to: HLPDSLQSGPCW*PWHCRGLGCIL
Trigger: CAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CAA 90 bp GGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCTGGCACTGCCGGGGGTaGGGATGCATTTTGGTGTCA +
Preference number: 3 (lower is better)
Translates to: GQGPFHLPDSLQSGPCWCWHCRG*GCILVS
Trigger: TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCA...GCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR GCA 72 bp CCATCTTCAGGGAGGTTCTTGACCGTGAGAGGGAGGTaGGAGCTTCCCACCGTCATCCCCACAGGAGTACCA +
Preference number: 3 (lower is better)
Translates to: PSSGRFLTVRGR*ELPTVIPTGVP
Trigger: TGGTACTCCTGTGGGGATGACGGTGGGAAGCTCGCACCTCCCTCTCACGGTCAAGAACCTCCCTGAAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR CCA 72 bp ACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTaGGACCAGCAGCTCGGACCGCCGAGCCATCACTTT +
Preference number: 3 (lower is better)
Translates to: TAGGWDAFWCQK*DQQLGPPSHHF
Trigger: AAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 72 bp GGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTaGAGAGGACAAGGACCGTTCCACCTGCCAGACAGT +
Preference number: 3 (lower is better)
Translates to: GDFMKVVPAGPG*RGQGPFHLPDS
Trigger: ACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CAA 90 bp GGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCGGGTTGGGATGCATTTaGGTGTCAGAAGTGGGACCA +
Preference number: 3 (lower is better)
Translates to: GQGPFHLPDSLQSGPCWCGLGCI*VSEVGP
Trigger: TGGTCCCACTTCTGACACCAAAATGCATCCCAACCC...GCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CAA 90 bp TGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCGGGTTGGGATGCATTTaGGTGTCAGAAGTGGGACCA +
Preference number: 3 (lower is better)
Translates to: WRGQGPFHLPDSLQSGPCGLGCI*VSEVGP
Trigger: TGGTCCCACTTCTGACACCAAAATGCATCCCAACCC...GCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 72 bp CTTCGTAGCCAAGAGGCAGCCAGACTCCCCCAGAAATaGGCCCTTCCCTTTTGTTCATTGTGTGGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: LRSQEAARLPQK*ALPFCSLCGWW
Trigger: CCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTTCTGGGGGAGTCTGGCTGCCTCTTGGCTACGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CAA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCACTGCCGGGGGTaGGGATGCATTTTGGTGTCA +
Preference number: 3 (lower is better)
Translates to: TCEEEVCWRLHEGSACWAWHCRG*GCILVS
Trigger: TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCA...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR GCA 72 bp TGGACTCAGATGACAGACACTTGTGAGGAAGAGGTTTaGTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: WTQMTDTCEEEV*WRLHEGSACWA
Trigger: GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGTGTCTGTCATCTGAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 72 bp ACTCAGATGACAGACACTTGTGAGGAAGAGGTTTGCTaGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: TQMTDTCEEEVC*RLHEGSACWAW
Trigger: CCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGTGTCTGTCATCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CAA 90 bp ATCAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTCACAAAAACCCACCTaGGGGTCGTTGGTAGTCTGG +
Preference number: 3 (lower is better)
Translates to: IKTKGLPKVQDSTVQSPISQKPT*GSLVVW
Trigger: CCAGACTACCAACGACCCCAAGGTGGGTTTTTGTGA...GATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR CAA 90 bp AGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCGGGTTGGGATGCATTTaGGTGTCAGAAGTGGGACCA +
Preference number: 3 (lower is better)
Translates to: REKPGATEKCSLLLGINFGLGCI*VSEVGP
Trigger: TGGTCCCACTTCTGACACCAAAATGCATCCCAACCC...GAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CAA 90 bp AAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGACTTTGCAGAAAGTaGGTTTTAGCCCGGGCCATC +
Preference number: 3 (lower is better)
Translates to: KTKGLPKVQDSTVQSPIFRLCRK*VLARAI
Trigger: GATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCT...GAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR CAA 90 bp AAATGGGCCCTTCCCTTTTGTTCATTGTGTGGGTGGTGGCTGAAAGGAGGGAAACCCCTTCAGCTTTCTTaGGACTCAGATGACAGACAC +
Preference number: 3 (lower is better)
Translates to: KWALPFCSLCGWWLKGGKPLQLS*DSDDRH
Trigger: GTGTCTGTCATCTGAGTCCAAAGAAAGCTGAAGGGG...TTTCCCTCCTTTCAGCCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CAA 90 bp TCAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTGTGGATGTGGTATTTaGTTCAGGTTTGGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: SRPRGCQRCRIQQSNLPSCGCGI*FRFGLC
Trigger: GCAGAGGCCAAACCTGAACAAAATACCACATCCACA...AGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR CAA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGGTATTTTGTTCAGGTTaGGCCTCTGCTGACTGGTTG +
Preference number: 3 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWVFCSG*ASADWL
Trigger: CAACCAGTCAGCAGAGGCCAAACCTGAACAAAATAC...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR GCA 72 bp CAAACAATTACATCAAGACCAAGGGGCTGCCAAAGGTaGAGGATTCAACAGTCCAATCTCCCATCTTCAGGG +
Preference number: 3 (lower is better)
Translates to: QTITSRPRGCQR*RIQQSNLPSSG
Trigger: CCCTGAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGATGTAATTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR CCA 72 bp ATCTGTGTTCCACTTCCTCGTTTCAGTAACCTAAAGTaGAACCGCATGCCTGCCTTCCTACTATCTTCCCTC +
Preference number: 3 (lower is better)
Translates to: ICVPLPRFSNLK*NRMPAFLLSSL
Trigger: GAGGGAAGATAGTAGGAAGGCAGGCATGCGGTTCCACTTTAGGTTACTGAAACGAGGAAGTGGAACACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR CCA 72 bp GGAATAACAGAAGTGGTCCACTTTGGAAGTCCCGTGTaGATGTGGTATTTTGTTCAGGTTTGGCCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: GITEVVHFGSPV*MWYFVQVWPLL
Trigger: CAGCAGAGGCCAAACCTGAACAAAATACCACATCCACACGGGACTTCCAAAGTGGACCACTTCTGTTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR-3UTR CAA 90 bp CTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATTAGCTTTGCCCCTTCAGCTTTCTTaGGACTCAGATGACAGACAC +
Preference number: 3 (lower is better)
Translates to: LEPVHLAKCRSPTRSLALPLQLS*DSDDRH
Trigger: GTGTCTGTCATCTGAGTCCAAAGAAAGCTGAAGGGG...CAAAGCTAATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CAA 90 bp AAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTACCAGATCATTAGCTTaGCACAGTACCCCCAAAACA +
Preference number: 3 (lower is better)
Translates to: KGPPNQMSCLEPVHLAKCTRSLA*HSTPKT
Trigger: TGTTTTGGGGGTACTGTGCAAAGCTAATGATCTGGT...ACACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR-3UTR CAA 90 bp AAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCACTGGAGCCAGTACATTaGGCCAAGTGTAGAAGTCCA +
Preference number: 3 (lower is better)
Translates to: KCSLLLGINFKGPPNQMSLEPVH*AKCRSP
Trigger: TGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG...TGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 72 bp TCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTaGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAA +
Preference number: 3 (lower is better)
Translates to: STSKGPQTKCHV*SQYIWPSVEVQ
Trigger: TTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CCA 72 bp GATGTGGTATTTTGTTCAGGTTTGGCCTCTGCTGACTaGTTGCAAATTGGCAACAATCTTTTCTCCTTGACC +
Preference number: 3 (lower is better)
Translates to: DVVFCSGLASAD*LQIGNNLFSLT
Trigger: GGTCAAGGAGAAAAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR TCA 72 bp TGTGGATGTGGTATTTTGTTCAGGTTTGGCCTCTGCTaGCTGGTTGCAAATTGGCAACAATCTTTTCTCCTT +
Preference number: 3 (lower is better)
Translates to: CGCGILFRFGLC*LVANWQQSFLL
Trigger: AAGGAGAAAAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCACATCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR TCA 72 bp ATCCAGCAGCAAGGTGCAGAACCCAATCTGTGTCTCTaGGTCTCTAGACTAAATACTTGCTATATCCTATTT +
Preference number: 3 (lower is better)
Translates to: IQQQGAEPNLCL*VSRLNTCYILF
Trigger: AAATAGGATATAGCAAGTATTTAGTCTAGAGACTCAGAGACACAGATTGGGTTCTGCACCTTGCTGCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
3UTR GCA 72 bp GCAATGCAACCTTATATAATCCTCTTAATCACTCCATaGCTCGGTTTTCCCAAATATCATCATGATGCTGGA +
Preference number: 3 (lower is better)
Translates to: AMQPYIILLITP*LGFPKYHHDAG
Trigger: TCCAGCATCATGATGATATTTGGGAAAACCGAGGCATGGAGTGATTAAGAGGATTATATAAGGTTGCATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp GGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCATCAGGGCCCTGCTGGTaGCCTTGGCACTGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GPCWCPWHCRGLGCILVSSGPCW*PWHCRG
Trigger: CCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGA...TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGCCAGCCTCAGCCTCTaGACCCTCCCCGGCACTTGT +
Preference number: 4 (lower is better)
Translates to: GPCWCPWHCRGLGCILVSASLSL*TLPGTC
Trigger: ACAAGTGCCGGGGAGGGTGCAGAGGCTGAGGCTGGC...TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS-3UTR GCA 90 bp CCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGTCAGGGCCCTGCTGGTaGCCTTGGCACTGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: PGWRGQGPFHLPDSLQSGSGPCW*PWHCRG
Trigger: CCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGA...CCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTTCAGGGCCCTGCTGGTaGCCTTGGCACTGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: AGEDKDRSTCQTVFSQGPSGPCW*PWHCRG
Trigger: CCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGA...AGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTCTCCTGCGGATGGGTaGGGTGTGGGTGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SQGPAGALGTAGGWDAFWSPADG*GVGAWD
Trigger: GTCCCAGGCACCCACACCCCACCCATCCGCAGGAGA...CCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTTCTCCTGCGGATGGGTaGGGTGTGGGTGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCSPADG*GVGAWD
Trigger: GTCCCAGGCACCCACACCCCACCCATCCGCAGGAGA...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGGGAGGGAGCCGGTGGTaGAGGGGAGGTGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: PGWRGQGPFHLPDSLQSGGGSRW*RGGAGR
Trigger: ACGGCCAGCACCTCCCCTCCACCACCGGCTCCCTCC...CCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGGAGGGAGCCGGTGGTaGAGGGGAGGTGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTGGSRW*RGGAGR
Trigger: ACGGCCAGCACCTCCCCTCCACCACCGGCTCCCTCC...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCGCCGAAAGGGTCTTaGCCTCGCCGACCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTAPKGS*PRRPRC
Trigger: GCAGCGAGGTCGGCGAGGTCAAGACCCTTTCGGCGC...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR GCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGTGGTGGAGGGGAGGTaGTGGCCGTGGCTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTVVEGR*WPWLPY
Trigger: GTACGGCAGCCACGGCCAGCACCTCCCCTCCACCAC...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGTCAGGGCCCTGCTGGTaGCCTTGGCACTGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: EVCWRLHEGSACWAWLERSGPCW*PWHCRG
Trigger: CCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGA...CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTTGGGCCACACCCTGCTaGCCACTCTTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCWATPC*PLFWAV
Trigger: CACAGCCCAGAAGAGTGGCCAGCAGGGTGTGGCCCA...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCTGGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGGAGGGCAGGACAGTGTaGTGGTGCTGGGCCACACCC +
Preference number: 4 (lower is better)
Translates to: AGPGWRGQGPFHLPDSLQEGRTV*WCWATP
Trigger: GGGTGTGGCCCAGCACCACCACACTGTCCTGCCCTC...CTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCCCCTGCTGGTGCCCTTaGCACTGCCGGGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTPCWCP*HCRGLG
Trigger: TCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGG...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CAA 72 bp TGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTaGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCC +
Preference number: 4 (lower is better)
Translates to: WCPWHCRGLGCI*VSEVGPAARTA
Trigger: GGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTGGCTCAGCCGCCTGGTaGGCTTGGTGCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCGSAAW*AWCQSV
Trigger: AACAGATTGGCACCAAGCTCACCAGGCGGCTGAGCC...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCTGCTGGGCCACACCCTaGTGGCCACTCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GQGPFHLPDSLQSGPCWCCWATP*WPLFWA
Trigger: AGCCCAGAAGAGTGGCCAGCAGGGTGTGGCCCAGCA...GCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGGTGCTGGCCGTGGCTaGCGTACTGCAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: AGALGTAGGWDAFWCQKWGAGRG*RTAAGA
Trigger: AGCACCAGCTGCAGTACGGCAGCCACGGCCAGCACC...CCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGGTGCTGGCCGTGGCTaGCGTACTGCAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTGAGRG*RTAAGA
Trigger: AGCACCAGCTGCAGTACGGCAGCCACGGCCAGCACC...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGGTGCTGGCCGTGGCTaGCGTACTGCAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: AGEDKDRSTCQTVFSQGPGAGRG*RTAAGA
Trigger: AGCACCAGCTGCAGTACGGCAGCCACGGCCAGCACC...AGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGGAACAGGGGACCCGCTaGTCAGAGCTTTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SQGPAGALGTAGGWDAFWEQGTR*SELSSL
Trigger: GAGGCTGGAAAGCTCTGAGCAGCGGGTCCCCTGTTC...CCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTTGGTGCCCTTGGCACTaGCGGGGGTTGGGATGCATT +
Preference number: 4 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCWCPWH*RGLGCI
Trigger: AATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCA...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCTGGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGACGGCGTGTCGCTCTTaGAGCGCACTCTCCGGATGG +
Preference number: 4 (lower is better)
Translates to: AGPGWRGQGPFHLPDSLQTACRS*SALSGW
Trigger: CCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGT...CTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR CCA 90 bp GTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCTCTCCTGCGGATGGGTaGGGTGTGGGTGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VPLALPGVGMHFGVRSGTSPADG*GVGAWD
Trigger: GTCCCAGGCACCCACACCCCACCCATCCGCAGGAGA...GGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTCCTGGGCATTGGGACTaGCTCCATTTCGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: VRALLVPLALPGVGMHFGPGHWD*LHFGQG
Trigger: GCCCTGTCCGAAATGGAGCCAGTCCCAATGCCCAGG...ACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGAGGGCAGGACAGTGTaGTGGTGCTGGGCCACACCC +
Preference number: 4 (lower is better)
Translates to: AGEDKDRSTCQTVFSQGPEGRTV*WCWATP
Trigger: GGGTGTGGCCCAGCACCACCACACTGTCCTGCCCTC...AGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCTGGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGCTGCCGTACTGCAGCTaGTGCTGGATCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: AGPGWRGQGPFHLPDSLQLPYCS*CWIWEG
Trigger: GCCCTCCCAGATCCAGCACCAGCTGCAGTACGGCAG...CTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGGGAGGGAGCCGGTGGTaGAGGGGAGGTGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: EEVCWRLHEGSACWAWLEGGSRW*RGGAGR
Trigger: ACGGCCAGCACCTCCCCTCCACCACCGGCTCCCTCC...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGCCCGAGGGGTGCATaGGGAGGGAGCCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: EEVCWRLHEGSACWAWLESPRGA*GGSRWW
Trigger: CCACCACCGGCTCCCTCCCCATGCACCCCTCGGGCT...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTAGCCCGAGGGGTGCATaGGGAGGGAGCCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITSPRGA*GGSRWW
Trigger: CCACCACCGGCTCCCTCCCCATGCACCCCTCGGGCT...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGGTAGTGCCTGCTaGGCCTGGCTGGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: GPCWCPWHCRGLGCILVSEGSAC*AWLERT
Trigger: TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTC...TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GCTGGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGCTTAGCAACGGAAGGTaGCGCCAGCCTCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: AGPGWRGQGPFHLPDSLQLSNGR*RQPQPL
Trigger: CAGAGGCTGAGGCTGGCGTCACCTTCCGTTGCTAAG...CTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS-3UTR GCA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGTGCTGGGCCACACCCTaGTGGCCACTCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AWLERTRTVPPARQSSVRCWATP*WPLFWA
Trigger: AGCCCAGAAGAGTGGCCAGCAGGGTGTGGCCCAGCA...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCGTACTGCAGCTGGTaGTGGATCTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGWRGQGPFHLPDSLQSGPYCSW*WIWEGR
Trigger: CCTGCCCTCCCAGATCCAGCACCAGCTGCAGTACGG...CCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGCCGTACTGCAGCTGGTaGTGGATCTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AWLERTRTVPPARQSSVRPYCSW*WIWEGR
Trigger: CCTGCCCTCCCAGATCCAGCACCAGCTGCAGTACGG...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCCGTGGCTGCCGTACTaGAGCTGGTGCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RTRTVPPARQSSVRALLVPWLPY*SWCWIW
Trigger: CCAGATCCAGCACCAGCTGCAGTACGGCAGCCACGG...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGCTTCAGTCAGGGCCCTaGTGGTGCCCTTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: AWLERTRTVPPARQSSVRLQSGP*WCPWHC
Trigger: GCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAG...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGCTTCAGTCAGGGCCCTaGTGGTGCCCTTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: AGALGTAGGWDAFWCQKWLQSGP*WCPWHC
Trigger: GCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAG...CCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTACCAGACCCCCGACCTaGCTCGGCCGTCCCCAATCT +
Preference number: 4 (lower is better)
Translates to: LLVPLALPGVGMHFGVRSTRPPT*LGRPQS
Trigger: AGATTGGGGACGGCCGAGGCAGGTCGGGGGTCTGGT...ACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGACGGCGTGTCGCTCTTaGAGCGCACTCTCCGGATGG +
Preference number: 4 (lower is better)
Translates to: RTRTVPPARQSSVRALLVTACRS*SALSGW
Trigger: CCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGT...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR CCA 90 bp CTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACTGGGGTGTGGGTGCCTaGGACGAGGGAGTCAGAACG +
Preference number: 4 (lower is better)
Translates to: LPGVGMHFGVRSGTSSSDWGVGA*DEGVRT
Trigger: CGTTCTGACTCCCTCGTCCCAGGCACCCACACCCCA...GTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCTGGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGGCAGAGACAGCTGGCTaGAGCTCAGGGACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: AGPGWRGQGPFHLPDSLQAETAG*SSGTAH
Trigger: ATGGGCAGTCCCTGAGCTCCAGCCAGCTGTCTCTGC...CTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACAGGGAGGTGCTGGCCGTaGCTGCCGTACTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QKWDQQLGPPSHHFCVFTGRCWP*LPYCSW
Trigger: CCAGCTGCAGTACGGCAGCCACGGCCAGCACCTCCC...TGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACGGGAGGTGCTGGCCGTaGCTGCCGTACTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SEVGPAARTAEPSLLRFHGRCWP*LPYCSW
Trigger: CCAGCTGCAGTACGGCAGCCACGGCCAGCACCTCCC...GTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATAAGCCCGAGGGGTGCATaGGGAGGGAGCCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHISPRGA*GGSRWW
Trigger: CCACCACCGGCTCCCTCCCCATGCACCCCTCGGGCT...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGTCTGCAGTTGGCCTCTaGCTCAGCCGCCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PGWRGQGPFHLPDSLQSGSAVGL*LSRLVS
Trigger: GCTCACCAGGCGGCTGAGCCAGAGGCCAACTGCAGA...CCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGGCACTGCCGGGGGTTaGGATGCATTTTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VRALLVPLALPGVGMHFGGTAGG*DAFWCQ
Trigger: CTGACACCAAAATGCATCCCAACCCCCGGCAGTGCC...ACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGGCACTGCCGGGGGTTaGGATGCATTTTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GPCWCPWHCRGLGCILVSGTAGG*DAFWCQ
Trigger: CTGACACCAAAATGCATCCCAACCCCCGGCAGTGCC...TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGCCCTGCTGGTGCCCTTaGCACTGCCGGGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: EEEVCWRLHEGSACWAWLPCWCP*HCRGLG
Trigger: TCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGG...CAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGCCCTGCTGGTGCCCTTaGCACTGCCGGGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: RKRFAGDFMKVVPAGPGWPCWCP*HCRGLG
Trigger: TCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGG...CCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGCCTGCTGGGCCTGGCTaGAGAGGACAAGGACCGTTC +
Preference number: 4 (lower is better)
Translates to: AWLERTRTVPPARQSSVRPAGPG*RGQGPF
Trigger: GAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGCAGG...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCGCTTCGCTGAGCGCGTaGGCTCCGCCATCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: TCEEEVCWRLHEGSACWAASLSA*APPSGP
Trigger: GGGGCCGGATGGCGGAGCCCACGCGCTCAGCGAAGC...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675203.1
3UTR CAA 72 bp TCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTaGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCA +
Preference number: 4 (lower is better)
Translates to: SGPCWCPWHCRG*GCILVSEVGPA
Trigger: TGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCGGCTCAGCCGCCTGGTaGGCTTGGTGCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: VPLALPGVGMHFGVRSGTGSAAW*AWCQSV
Trigger: AACAGATTGGCACCAAGCTCACCAGGCGGCTGAGCC...GGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGTCCACCGTGGGCCTTTaGCTGAGCTTTCGGGTTAGC +
Preference number: 4 (lower is better)
Translates to: AGGWDAFWCQKWDQQLGPSTVGL*LSFRVS
Trigger: GCTAACCCGAAAGCTCAGTCAAAGGCCCACGGTGGA...CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCTTTGTCTGCAGCGGTaGGGCGGGTCCACGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LPGVGMHFGVRSGTSSSDLCLQR*GGSTAY
Trigger: ATAAGCCGTGGACCCGCCTCACCGCTGCAGACAAAG...GTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGGGAGATCCTGGCCTCTaGGAGGTACGGCGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: EVCWRLHEGSACWAWLERGDPGL*EVRRVA
Trigger: AGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCC...CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR GCA 90 bp GTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTCAAACTTACTTCTCCTaGGGATGGGTGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VRALLVPLALPGVGMHFGQTYFS*GWVGCG
Trigger: CCCACACCCCACCCATCCGCAGGAGAAGTAAGTTTG...ACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCACAAACTTACTTCTCCTaGGGATGGGTGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GPCWCPWHCRGLGCILVSQTYFS*GWVGCG
Trigger: CCCACACCCCACCCATCCGCAGGAGAAGTAAGTTTG...TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGAGGACAGTGTGGTGGTaGTGGGCCACACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EVCWRLHEGSACWAWLERRTVWW*WATPCW
Trigger: CCAGCAGGGTGTGGCCCAGCACCACCACACTGTCCT...CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCTAAGGAGTCCTTCCTaGAGACCTTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCLRSPS*RPSWPG
Trigger: CCCTGGCCATGAAGGTCTGCAGGAAGGACTCCTTAG...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCCCTTGGCACTaGCGGGGGTTGGGATGCATT +
Preference number: 4 (lower is better)
Translates to: WRGQGPFHLPDSLQSGPCWCPWH*RGLGCI
Trigger: AATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCA...GCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCCATGAAGGTAGTGCCTaGTGGGCCTGGCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VPLALPGVGMHFGVRSGTHEGSA*WAWLER
Trigger: CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATG...GGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTCATGAAGGTAGTGCCTaGTGGGCCTGGCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AGEDKDRSTCQTVFSQGPHEGSA*WAWLER
Trigger: CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATG...AGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCAGGGAGCAGGATGGGTaGTCAGTGCCAGCCTTCGTA +
Preference number: 4 (lower is better)
Translates to: GQGPFHLPDSLQSGPCWCREQDG*SVPAFV
Trigger: TACGAAGGCTGGCACTGAGCACCCATCCTGCTCCCT...GCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGCTCTTTGCTCCCACATaGATCCGCCTCTCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SQGPAGALGTAGGWDAFWLFAPT*IRLSGS
Trigger: AGACCCAGAGAGGCGGATGCATGTGGGAGCAAAGAG...CCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR GCA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGTCTCGGGGTCTCACGTaGACATCCTCCTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AWLERTRTVPPARQSSVRSRGLT*TSSSGS
Trigger: GCTGCCAGAGGAGGATGTGCACGTGAGACCCCGAGA...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR CCA 90 bp GAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGTGGGGTGTGGGTGCCTaGGACGAGGGAGTCAGAACG +
Preference number: 4 (lower is better)
Translates to: EVCWRLHEGSACWAWLERWGVGA*DEGVRT
Trigger: CGTTCTGACTCCCTCGTCCCAGGCACCCACACCCCA...CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCAGAGACAGCTGGCTaGAGCTCAGGGACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTAETAG*SSGTAH
Trigger: ATGGGCAGTCCCTGAGCTCCAGCCAGCTGTCTCTGC...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGGGCAGGACAGTGTGGTaGTGCTGGGCCACACCCTGC +
Preference number: 4 (lower is better)
Translates to: RKRFAGDFMKVVPAGPGWGRTVW*CWATPC
Trigger: GCAGGGTGTGGCCCAGCACCACCACACTGTCCTGCC...CCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGACAGAGGGCAGGACAGTGTaGTGGTGCTGGGCCACACCC +
Preference number: 4 (lower is better)
Translates to: VCWRLHEGSACWAWLERTEGRTV*WCWATP
Trigger: GGGTGTGGCCCAGCACCACCACACTGTCCTGCCCTC...TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGTACTGCAGCTGGTGCTaGATCTGGGAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: AGGWDAFWCQKWDQQLGPYCSWC*IWEGRT
Trigger: TGTCCTGCCCTCCCAGATCCAGCACCAGCTGCAGTA...CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATAGGGAGGTGCTGGCCGTaGCTGCCGTACTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHIGRCWP*LPYCSW
Trigger: CCAGCTGCAGTACGGCAGCCACGGCCAGCACCTCCC...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCAGTTCCTCTGCAGTTaGCCTCTGGCTCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RTRTVPPARQSSVRALLVQFLCS*PLAQPP
Trigger: AGGCGGCTGAGCCAGAGGCCAACTGCAGAGGAACTG...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTCCTGCTGGGCCTGGCTaGAGAGGACAAGGACCGTTC +
Preference number: 4 (lower is better)
Translates to: WCQKWDQQLGPPSHHFCVPAGPG*RGQGPF
Trigger: GAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGCAGG...AACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCGAAGGTAGTGCCTGCTaGGCCTGGCTGGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: WRGQGPFHLPDSLQSGPCEGSAC*AWLERT
Trigger: TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTC...GCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGGCAGCCTCCAGCCGGTaGGGCACAGACTGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: EVCWRLHEGSACWAWLERAASSR*GTDCLL
Trigger: TAAGAGGCAGTCTGTGCCCCACCGGCTGGAGGCTGC...CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp GGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCAGCTCCCACGTGGGATaGAATGGAGAAGGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GQGPFHLPDSLQSGPCWCSSHVG*NGEGEG
Trigger: ACCCTCCCCTTCTCCATTCCATCCCACGTGGGAGCT...GCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGCCGTGCCAATTCCCTaGCCGCTGACCAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCAVPIP*PLTSSH
Trigger: GTGGGAGCTGGTCAGCGGCCAGGGAATTGGCACGGC...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR TCA 90 bp TGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCCTCCCCGGCACTTGTTaGCCCCTTTCAACAGGACAC +
Preference number: 4 (lower is better)
Translates to: WRGQGPFHLPDSLQSGPCLPGTC*PLSTGH
Trigger: GTGTCCTGTTGAAAGGGGTCAACAAGTGCCGGGGAG...GCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS-3UTR TCA 90 bp GAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGGGCTCAGCCGCCTGGTaGGCTTGGTGCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: EVCWRLHEGSACWAWLERGSAAW*AWCQSV
Trigger: AACAGATTGGCACCAAGCTCACCAGGCGGCTGAGCC...CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGTCCACCGTGGGCCTTTaGCTGAGCTTTCGGGTTAGC +
Preference number: 4 (lower is better)
Translates to: HCRGLGCILVSEVGPAARSTVGL*LSFRVS
Trigger: GCTAACCCGAAAGCTCAGTCAAAGGCCCACGGTGGA...CCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGCTTTGTCTGCAGCGGTaGGGCGGGTCCACGGCTTAT +
Preference number: 4 (lower is better)
Translates to: EVCWRLHEGSACWAWLERLCLQR*GGSTAY
Trigger: ATAAGCCGTGGACCCGCCTCACCGCTGCAGACAAAG...CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACTGCTGGGCCACACCCTaGTGGCCACTCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SEVGPAARTAEPSLLRFHCWATP*WPLFWA
Trigger: AGCCCAGAAGAGTGGCCAGCAGGGTGTGGCCCAGCA...GTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCAGGACAGTGTGGTGGTaGTGGGCCACACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCRTVWW*WATPCW
Trigger: CCAGCAGGGTGTGGCCCAGCACCACCACACTGTCCT...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGACAGTGTGGTGGTaGTGGGCCACACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EEVCWRLHEGSACWAWLERTVWW*WATPCW
Trigger: CCAGCAGGGTGTGGCCCAGCACCACCACACTGTCCT...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTCCGTACTGCAGCTGGTaGTGGATCTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITPYCSW*WIWEGR
Trigger: CCTGCCCTCCCAGATCCAGCACCAGCTGCAGTACGG...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCCCGTGGCTGCCGTACTaGAGCTGGTGCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCPWLPY*SWCWIW
Trigger: CCAGATCCAGCACCAGCTGCAGTACGGCAGCCACGG...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTCGTCTATCATTCTaGAGCCCGAGGGGTGCATGG +
Preference number: 4 (lower is better)
Translates to: AGEDKDRSTCQTVFSQGPARLSF*SPRGAW
Trigger: CCATGCACCCCTCGGGCTGCAGAATGATAGACGAGC...AGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCGAGCTTTCCAGCCTCTaGATGGTCATGGCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: GQGPFHLPDSLQSGPCWCELSSL*MVMASV
Trigger: AACGCTGGCCATGACCATGCAGAGGCTGGAAAGCTC...GCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGTTGGTGCCAATCTGTTaGCTCAGCTCCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: AWLERTRTVPPARQSSVRLVPIC*LSSSRS
Trigger: GGAGCGGCTGGAGCTGAGGCAACAGATTGGCACCAA...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGTTGGTGCCAATCTGTTaGCTCAGCTCCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RTRTVPPARQSSVRALLVLVPIC*LSSSRS
Trigger: GGAGCGGCTGGAGCTGAGGCAACAGATTGGCACCAA...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGACGGCTTATCTGCCCTaGGGTCATAGTCCTGAGCGT +
Preference number: 4 (lower is better)
Translates to: AGGWDAFWCQKWDQQLGPTAYLP*GHSPER
Trigger: ACGCTCAGGACTATGACCGCAGGGCAGATAAGCCGT...CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGGGTCCACGGCTTATCTaGCCTGCGGTCATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RTRTVPPARQSSVRALLVGPRLI*PAVIVL
Trigger: CAGGACTATGACCGCAGGGCAGATAAGCCGTGGACC...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGATGGCAGCTTTGTCTaGAGCGGTGAGGCGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LLVPLALPGVGMHFGVRSDGSFV*SGEAGP
Trigger: TGGACCCGCCTCACCGCTGCAGACAAAGCTGCCATC...ACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTTGCCGGGGGTTGGGATaGATTTTGGTGTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCCRGLG*ILVSEV
Trigger: CACTTCTGACACCAAAATGCATCCCAACCCCCGGCA...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGTGGTGCCCTTGGCACTaGCGGGGGTTGGGATGCATT +
Preference number: 4 (lower is better)
Translates to: EVCWRLHEGSACWAWLERWCPWH*RGLGCI
Trigger: AATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCA...CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTCTTCAGTCAGGGCCCTaGTGGTGCCCTTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITLQSGP*WCPWHC
Trigger: GCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAG...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCTGCTACACACGCCCATaGAGCCTCTCGGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCCYTRP*SLSVPG
Trigger: GCCTGGCACCGAGAGGCTGCATGGGCGTGTGTAGCA...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp CTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTCCTGGGCATTGGGACTaGCTCCATTTCGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: LLVPLALPGVGMHFGVRSPGHWD*LHFGQG
Trigger: GCCCTGTCCGAAATGGAGCCAGTCCCAATGCCCAGG...ACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCGGGATCCCTGGGCATTaGGACTGGCTCCATTTCGGA +
Preference number: 4 (lower is better)
Translates to: VPLALPGVGMHFGVRSGTGIPGH*DWLHFG
Trigger: TCCGAAATGGAGCCAGTCCCAATGCCCAGGGATCCC...GGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACAGTTCCTCTGCAGTTaGCCTCTGGCTCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: TAGGWDAFWCQKWDQQLGQFLCS*PLAQPP
Trigger: AGGCGGCTGAGCCAGAGGCCAACTGCAGAGGAACTG...TCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGGCACTGCCGGGGGTTaGGATGCATTTTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: AWLERTRTVPPARQSSVRGTAGG*DAFWCQ
Trigger: CTGACACCAAAATGCATCCCAACCCCCGGCAGTGCC...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGATCTGGCCCATCCATaGTGTCTGACGGTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: AGALGTAGGWDAFWCQKWDLAHP*CLTVGA
Trigger: TGCTCCAACCGTCAGACATCATGGATGGGCCAGATC...CCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCGATCTGGCCCATCCATaGTGTCTGACGGTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: VPLALPGVGMHFGVRSGTDLAHP*CLTVGA
Trigger: TGCTCCAACCGTCAGACATCATGGATGGGCCAGATC...GGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTCGGGCATACAGATCATaGCTTTCTTTGGAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: VRALLVPLALPGVGMHFGRAYRS*LSLEVA
Trigger: CGCTACCTCCAAAGAAAGTCATGATCTGTATGCCCG...ACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp AGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGGGCTCAGCCGCCTGGTaGGCTTGGTGCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: RKRFAGDFMKVVPAGPGWGSAAW*AWCQSV
Trigger: AACAGATTGGCACCAAGCTCACCAGGCGGCTGAGCC...CCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGACACTTTGTCTGCAGCGGTaGGGCGGGTCCACGGCTTAT +
Preference number: 4 (lower is better)
Translates to: VCWRLHEGSACWAWLERTLCLQR*GGSTAY
Trigger: ATAAGCCGTGGACCCGCCTCACCGCTGCAGACAAAG...TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp AGTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGGATGACAGACACTTGTaGGGAAGAGGTTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SQGPAGALGTAGGWDAFWDDRHL*GRGLLE
Trigger: CTCCAGCAAACCTCTTCCTCACAAGTGTCTGTCATC...CCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTACACTGGCCCATCCATaGTGTCTGACGGTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: AGEDKDRSTCQTVFSQGPTLAHP*CLTVGA
Trigger: TGCTCCAACCGTCAGACATCATGGATGGGCCAGTGT...AGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR TCA 90 bp GCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGTCTCTGGGAGTCTTCTaGCTCAGCAAGCCTGTACAG +
Preference number: 4 (lower is better)
Translates to: AGGWDAFWCQKWDQQLGPSLGVF*LSKPVQ
Trigger: CTGTACAGGCTTGCTGAGTCAGAAGACTCCCAGAGA...CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR GCA 90 bp CACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGCTGGAGCTCAGGGACTaGCCATTTTCTAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: HCRGLGCILVSEVGPAARLELRD*PFSRES
Trigger: GGACTCCCTAGAAAATGGGCAGTCCCTGAGCTCCAG...CCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCGTGGTGGAGGGGAGGTaGTGGCCGTGGCTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: KTKGLPKVQDSTVQSPIFVVEGR*WPWLPY
Trigger: GTACGGCAGCCACGGCCAGCACCTCCCCTCCACCAC...GAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp CAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACAGAACAGGGGACCCGCTaGTCAGAGCTTTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QKWDQQLGPPSHHFCVFTEQGTR*SELSSL
Trigger: GAGGCTGGAAAGCTCTGAGCAGCGGGTCCCCTGTTC...TGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGGAACAGGGGACCCGCTaGTCAGAGCTTTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RKRFAGDFMKVVPAGPGWEQGTR*SELSSL
Trigger: GAGGCTGGAAAGCTCTGAGCAGCGGGTCCCCTGTTC...CCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCAAGGCCCATAGGTCCTaGTTTGGTGACCCCATCACC +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTKAHRS*FGDPIT
Trigger: GGTGATGGGGTCACCAAAGCAGGACCTATGGGCCTT...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGCTAAGGAGTCCTTCCTaGAGACCTTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HCRGLGCILVSEVGPAARLRSPS*RPSWPG
Trigger: CCCTGGCCATGAAGGTCTGCAGGAAGGACTCCTTAG...CCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCGCTCCTCATCCGTCTaGCTGGGAAGGATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: AGGWDAFWCQKWDQQLGPRSSSV*LGRMFF
Trigger: AAAGAACATCCTTCCCAGGCAGACGGATGAGGAGCG...CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp ACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGATTGGTGCCAATCTGTTaGCTCAGCTCCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TAGGWDAFWCQKWDQQLGLVPIC*LSSSRS
Trigger: GGAGCGGCTGGAGCTGAGGCAACAGATTGGCACCAA...TCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCCTGTTCCAGTTCCTCTaGAGTTGGCCTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VPLALPGVGMHFGVRSGTLFQFL*SWPLAQ
Trigger: CTGAGCCAGAGGCCAACTGCAGAGGAACTGGAACAG...GGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCTGTTCCAGTTCCTCTaGAGTTGGCCTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RTRTVPPARQSSVRALLVLFQFL*SWPLAQ
Trigger: CTGAGCCAGAGGCCAACTGCAGAGGAACTGGAACAG...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACACGGCTTATCTGCCCTaGGGTCATAGTCCTGAGCGT +
Preference number: 4 (lower is better)
Translates to: LPGVGMHFGVRSGTSSSDTAYLP*GHSPER
Trigger: ACGCTCAGGACTATGACCGCAGGGCAGATAAGCCGT...GTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCACGGCTTATCTGCCCTaGGGTCATAGTCCTGAGCGT +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTTAYLP*GHSPER
Trigger: ACGCTCAGGACTATGACCGCAGGGCAGATAAGCCGT...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp ACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGAGGTCCACGGCTTATCTaGCCTGCGGTCATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TAGGWDAFWCQKWDQQLGGPRLI*PAVIVL
Trigger: CAGGACTATGACCGCAGGGCAGATAAGCCGTGGACC...TCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGGATGGCAGCTTTGTCTaGAGCGGTGAGGCGGGTCCA +
Preference number: 4 (lower is better)
Translates to: EEVCWRLHEGSACWAWLEDGSFV*SGEAGP
Trigger: TGGACCCGCCTCACCGCTGCAGACAAAGCTGCCATC...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GCTGGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTGCCGGGGGTTGGGATaGATTTTGGTGTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: AGPGWRGQGPFHLPDSLQCRGLG*ILVSEV
Trigger: CACTTCTGACACCAAAATGCATCCCAACCCCCGGCA...CTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATGAAGGTAGTGCCTaGTGGGCCTGGCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QKWDQQLGPPSHHFCVFTHEGSA*WAWLER
Trigger: CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATG...TGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCGGCAGGGCCGGGGGCTaGTTGAGAAGGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGGRAGG*LRRGSC
Trigger: GCAGCTGCCCCTTCTCAAGCAGCCCCCGGCCCTGCC...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR GCA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCTGCCCAAAGCTCTTTaGTCCCACATGCATCCGCCT +
Preference number: 4 (lower is better)
Translates to: RTRTVPPARQSSVRALLVLPKAL*SHMHPP
Trigger: AGGCGGATGCATGTGGGAGCAAAGAGCTTTGGGCAG...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGGGAGGGAGCCGGTGGTaGAGGGGAGGTGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWGGSRW*RGGAGR
Trigger: ACGGCCAGCACCTCCCCTCCACCACCGGCTCCCTCC...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp TGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGGGAGGTTCTTGAGCCCGAGGGGTGCATaGGGAGGGAGCCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CQRCRIQQSNLPSSGRFLSPRGA*GGSRWW
Trigger: CCACCACCGGCTCCCTCCCCATGCACCCCTCGGGCT...CAAGAACCTCCCTGAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTGGTTGGGATGCATTTTaGTGTCAGAAGTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCGWDAF*CQKWDQ
Trigger: CTGGTCCCACTTCTGACACCAAAATGCATCCCAACC...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGGAAGGTAGTGCCTGCTaGGCCTGGCTGGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: EEVCWRLHEGSACWAWLEEGSAC*AWLERT
Trigger: TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTC...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTTCTGCAGTTGGCCTCTaGCTCAGCCGCCTACGGAAA +
Preference number: 4 (lower is better)
Translates to: LLVPLALPGVGMHFGVRSSAVGL*LSRLRK
Trigger: TTTCCGTAGGCGGCTGAGCCAGAGGCCAACTGCAGA...ACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379335.8
CDS-3UTR CCA 90 bp GCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGCCGTCCCCAATCTCTaGGAGTCTTCTGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: AGALGTAGGWDAFWCQKWAVPNL*ESSDSA
Trigger: TGCTGAGTCAGAAGACTCCCAGAGATTGGGGACGGC...CCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp GCTGGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGACCAAAGTCGGGGGATaGATTCAACTCACCGTGGAC +
Preference number: 4 (lower is better)
Translates to: AGPGWRGQGPFHLPDSLQTKVGG*IQLTVD
Trigger: GTCCACGGTGAGTTGAATCCATCCCCCGACTTTGGT...CTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCGTGCACATCCTCCTCTaGCAGCCCCACCCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: TCEEEVCWRLHEGSACWAVHILL*QPHPSG
Trigger: TCCGGAGGGGTGGGGCTGCCAGAGGAGGATGTGCAC...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR TCA 90 bp GCTGGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGCCTTTCCAGGGCTGCTaGCGTGTGTTTGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: AGPGWRGQGPFHLPDSLQPFQGC*RVFELF
Trigger: GAAAAGTTCAAACACACGTCAGCAGCCCTGGAAAGG...CTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGTGGCCAGCGTTTTGTTaGGCTCGTCTATCATTCTGC +
Preference number: 4 (lower is better)
Translates to: AGGWDAFWCQKWDQQLGPWPAFC*ARLSFC
Trigger: GCAGAATGATAGACGAGCTCAACAAAACGCTGGCCA...CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCGGGCCGGGGGCTGCTTaGGAAGGGGCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSGPGAA*EGAAAS
Trigger: TGAAGCAGCTGCCCCTTCTCAAGCAGCCCCCGGCCC...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR GCA 90 bp AAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCGGTGCTGGCCGTGGCTaGCGTACTGCAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: KTKGLPKVQDSTVQSPIFGAGRG*RTAAGA
Trigger: AGCACCAGCTGCAGTACGGCAGCCACGGCCAGCACC...GAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCGTGGTGGAGGGGAGGTaGTGGCCGTGGCTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGVVEGR*WPWLPY
Trigger: GTACGGCAGCCACGGCCAGCACCTCCCCTCCACCAC...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGCGCTCCTCATCCGTCTaGCTGGGAAGGATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: HCRGLGCILVSEVGPAARRSSSV*LGRMFF
Trigger: AAAGAACATCCTTCCCAGGCAGACGGATGAGGAGCG...CCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACAGGTCCACGGCTTATCTaGCCTGCGGTCATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: QKWDQQLGPPSHHFCVFTGPRLI*PAVIVL
Trigger: CAGGACTATGACCGCAGGGCAGATAAGCCGTGGACC...TGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATAGATGGCAGCTTTGTCTaGAGCGGTGAGGCGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHIDGSFV*SGEAGP
Trigger: TGGACCCGCCTCACCGCTGCAGACAAAGCTGCCATC...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGTGCCGGGGGTTGGGATaGATTTTGGTGTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: RTRTVPPARQSSVRALLVCRGLG*ILVSEV
Trigger: CACTTCTGACACCAAAATGCATCCCAACCCCCGGCA...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGAAGGACCGTTCCACCTaGCAGACAGTCTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PGWRGQGPFHLPDSLQSGKDRST*QTVFSQ
Trigger: CTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTT...CCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTAGGGAGCAGGATGGGTaGTCAGTGCCAGCCTTCGTA +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITREQDG*SVPAFV
Trigger: TACGAAGGCTGGCACTGAGCACCCATCCTGCTCCCT...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGGGAGCAGGATGGGTaGTCAGTGCCAGCCTTCGTA +
Preference number: 4 (lower is better)
Translates to: RKRFAGDFMKVVPAGPGWREQDG*SVPAFV
Trigger: TACGAAGGCTGGCACTGAGCACCCATCCTGCTCCCT...CCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGCGGTGGGGCACAGACTaGCTCTTACCTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: RKRFAGDFMKVVPAGPGWRWGTD*LLPSQS
Trigger: GCTCTGTGAAGGTAAGAGGCAGTCTGTGCCCCACCG...CCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR GCA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCCTCCTGGGTGTGACCTaGGGGTACTCAGACGTCTCT +
Preference number: 4 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCLLGVT*GYSDVS
Trigger: AGAGACGTCTGAGTACCCGCAGGTCACACCCAGGAG...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTGGGATCCCTGGGCATTaGGACTGGCTCCATTTCGGA +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITGIPGH*DWLHFG
Trigger: TCCGAAATGGAGCCAGTCCCAATGCCCAGGGATCCC...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GGAGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTGAGGGCAGGACAGTGTaGTGGTGCTGGGCCACACCC +
Preference number: 4 (lower is better)
Translates to: GGKSQGQLRSVHSFLASTEGRTV*WCWATP
Trigger: GGGTGTGGCCCAGCACCACCACACTGTCCTGCCCTC...AGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACTACTGCAGCTGGTGCTaGATCTGGGAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: SEVGPAARTAEPSLLRFHYCSWC*IWEGRT
Trigger: TGTCCTGCCCTCCCAGATCCAGCACCAGCTGCAGTA...GTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTACTGCAGCTGGTGCTaGATCTGGGAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITYCSWC*IWEGRT
Trigger: TGTCCTGCCCTCCCAGATCCAGCACCAGCTGCAGTA...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGTCCTGCAGACCTTCATaGCCAGGGAGCTGGTGTATA +
Preference number: 4 (lower is better)
Translates to: RTRTVPPARQSSVRALLVSCRPS*PGSWCI
Trigger: TATACACCAGCTCCCTGGCCATGAAGGTCTGCAGGA...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTCCTGCAGACCTTCATaGCCAGGGAGCTGGTGTATA +
Preference number: 4 (lower is better)
Translates to: WRGQGPFHLPDSLQSGPCSCRPS*PGSWCI
Trigger: TATACACCAGCTCCCTGGCCATGAAGGTCTGCAGGA...GCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATACAGTTCCTCTGCAGTTaGCCTCTGGCTCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHIQFLCS*PLAQPP
Trigger: AGGCGGCTGAGCCAGAGGCCAACTGCAGAGGAACTG...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTTTTTGGTGTCAGAAGTaGGACCAGCAGCTCGGACCG +
Preference number: 4 (lower is better)
Translates to: LLVPLALPGVGMHFGVRSFWCQK*DQQLGP
Trigger: CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA...ACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCCCTGCTGGTGCCCTTaGCACTGCCGGGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGPCWCP*HCRGLG
Trigger: TCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGG...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGGTGTTCACTCCTTCTTaGCATCAACTTCAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: SQGPAGALGTAGGWDAFWVFTPS*HQLQRA
Trigger: GGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACAC...CCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGCTTTTGTTCATTGTGTaGGTGGTGGCTGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: SQGPAGALGTAGGWDAFWLLFIV*VVAERR
Trigger: CCTCCTTTCAGCCACCACCCACACAATGAACAAAAG...CCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACTTGGCTGAAGGATCTTaGGACAGGAGGACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LPGVGMHFGVRSGTSSSDLAEGS*DRRTPD
Trigger: GTCTGGAGTCCTCCTGTCCCAAGATCCTTCAGCCAA...GTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR CCA 90 bp GCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGAGGTGGCCACCCATCTaGCATGAAGGGTCCATTTTA +
Preference number: 4 (lower is better)
Translates to: AGGWDAFWCQKWDQQLGPRWPPI*HEGSIL
Trigger: TAAAATGGACCCTTCATGCCAGATGGGTGGCCACCT...CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR TCA 90 bp GGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCTCCATTTCCAAGGCTTaGAAATCCTTCCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GQGPFHLPDSLQSGPCWCSISKA*KSFPGW
Trigger: CCAACCTGGGAAGGATTTTCAAGCCTTGGAAATGGA...GCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCCCTTTCCAGGGCTGCTaGCGTGTGTTTGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTPFQGC*RVFELF
Trigger: GAAAAGTTCAAACACACGTCAGCAGCCCTGGAAAGG...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTGGAGCACCTCATATaGGCAGGGATCCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITLEHLI*AGIPGH
Trigger: ATGCCCAGGGATCCCTGCTCATATGAGGTGCTCCAA...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTCCCATCCATGATGTCTaGCGGTTGGAGCACCTCATA +
Preference number: 4 (lower is better)
Translates to: WCQKWDQQLGPPSHHFCVPIHDV*RLEHLI
Trigger: TATGAGGTGCTCCAACCGTCAGACATCATGGATGGG...AACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTCCCATCCATGATGTCTaGCGGTTGGAGCACCTCATA +
Preference number: 4 (lower is better)
Translates to: LLVPLALPGVGMHFGVRSPIHDV*RLEHLI
Trigger: TATGAGGTGCTCCAACCGTCAGACATCATGGATGGG...ACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGTGGCCAGCGTTTTGTTaGGCTCGTCTATCATTCTGC +
Preference number: 4 (lower is better)
Translates to: PGWRGQGPFHLPDSLQSGWPAFC*ARLSFC
Trigger: GCAGAATGATAGACGAGCTCAACAAAACGCTGGCCA...CCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGATGACAGACACTTGTaGGGAAGAGGTTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AWLERTRTVPPARQSSVRDDRHL*GRGLLE
Trigger: CTCCAGCAAACCTCTTCCTCACAAGTGTCTGTCATC...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACCAAACTTACTTCTCCTaGGGATGGGTGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SEVGPAARTAEPSLLRFHQTYFS*GWVGCG
Trigger: CCCACACCCCACCCATCCGCAGGAGAAGTAAGTTTG...GTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGACACTGGAGCTCAGGGACTaGCCATTTTCTAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: VCWRLHEGSACWAWLERTLELRD*PFSRES
Trigger: GGACTCCCTAGAAAATGGGCAGTCCCTGAGCTCCAG...TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TCAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTCCGTACTGCAGCTGGTaGTGGATCTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SRPRGCQRCRIQQSNLPSPYCSW*WIWEGR
Trigger: CCTGCCCTCCCAGATCCAGCACCAGCTGCAGTACGG...AGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGTGGTGGAGGGGAGGTaGTGGCCGTGGCTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGVVEGR*WPWLPY
Trigger: GTACGGCAGCCACGGCCAGCACCTCCCCTCCACCAC...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGAGCTTTCCAGCCTCTaGATGGTCATGGCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCELSSL*MVMASV
Trigger: AACGCTGGCCATGACCATGCAGAGGCTGGAAAGCTC...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACCTAAGGAGTCCTTCCTaGAGACCTTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SEVGPAARTAEPSLLRFHLRSPS*RPSWPG
Trigger: CCCTGGCCATGAAGGTCTGCAGGAAGGACTCCTTAG...GTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCCTGTTCCAGTTCCTCTaGAGTTGGCCTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCLFQFL*SWPLAQ
Trigger: CTGAGCCAGAGGCCAACTGCAGAGGAACTGGAACAG...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTCTGTTCCAGTTCCTCTaGAGTTGGCCTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITLFQFL*SWPLAQ
Trigger: CTGAGCCAGAGGCCAACTGCAGAGGAACTGGAACAG...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACAACGGCTTATCTGCCCTaGGGTCATAGTCCTGAGCGT +
Preference number: 4 (lower is better)
Translates to: QKWDQQLGPPSHHFCVFTTAYLP*GHSPER
Trigger: ACGCTCAGGACTATGACCGCAGGGCAGATAAGCCGT...TGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTAAGGACCGTTCCACCTaGCAGACAGTCTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLVPLALPGVGMHFGVRSKDRST*QTVFSQ
Trigger: CTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTT...ACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTTGTGAGGAAGAGGTTTaGTGGAGACTTCATGAAGGT +
Preference number: 4 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCCEEEV*WRLHEG
Trigger: ACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACA...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTGAGGAAGAGGTTTaGTGGAGACTTCATGAAGGT +
Preference number: 4 (lower is better)
Translates to: SQGPAGALGTAGGWDAFWCEEEV*WRLHEG
Trigger: ACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACA...CCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTCGTTTCAGTCTCCTGCGGATGGGTaGGGTGTGGGTGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: LQKVGFSPGHLCSTSSFQSPADG*GVGAWD
Trigger: GTCCCAGGCACCCACACCCCACCCATCCGCAGGAGA...CTGAAACGAGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTCTCCTGCGGATGGGTaGGGTGTGGGTGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHSPADG*GVGAWD
Trigger: GTCCCAGGCACCCACACCCCACCCATCCGCAGGAGA...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATAGGGATCCCTGGGCATTaGGACTGGCTCCATTTCGGA +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHIGIPGH*DWLHFG
Trigger: TCCGAAATGGAGCCAGTCCCAATGCCCAGGGATCCC...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCGGCAGGACAGTGTGGTaGTGCTGGGCCACACCCTGC +
Preference number: 4 (lower is better)
Translates to: QLRSVHSFLASTSKGPQTGRTVW*CWATPC
Trigger: GCAGGGTGTGGCCCAGCACCACCACACTGTCCTGCC...GGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCGGCAGGACAGTGTGGTaGTGCTGGGCCACACCCTGC +
Preference number: 4 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSGRTVW*CWATPC
Trigger: GCAGGGTGTGGCCCAGCACCACCACACTGTCCTGCC...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATATACTGCAGCTGGTGCTaGATCTGGGAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHIYCSWC*IWEGRT
Trigger: TGTCCTGCCCTCCCAGATCCAGCACCAGCTGCAGTA...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCCTGCCGTACTGCAGCTaGTGCTGGATCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KTKGLPKVQDSTVQSPIFLPYCS*CWIWEG
Trigger: GCCCTCCCAGATCCAGCACCAGCTGCAGTACGGCAG...GAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp GCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATGTCAGGGGAGGTGCTGGCCGTaGCTGCCGTACTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ASVFPNIIMMLDCQGECQGRCWP*LPYCSW
Trigger: CCAGCTGCAGTACGGCAGCCACGGCCAGCACCTCCC...CTGACATTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp GTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGACAAGCTGTGGTAAGAAGTaGAACAGGGGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VCWRLHEGSACWAWLERTSCGKK*NRGPAA
Trigger: AGCAGCGGGTCCCCTGTTCCACTTCTTACCACAGCT...TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACTCATGGCCAGGGAGCTaGTGTATAATGAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: LPGVGMHFGVRSGTSSSDSWPGS*CIMSCR
Trigger: ACGACAGCTCATTATACACCAGCTCCCTGGCCATGA...GTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTTGGTGTCAGAAGTaGGACCAGCAGCTCGGACCG +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITFWCQK*DQQLGP
Trigger: CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCGGTTGGGATGCATTTTaGTGTCAGAAGTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: VPLALPGVGMHFGVRSGTGWDAF*CQKWDQ
Trigger: CTGGTCCCACTTCTGACACCAAAATGCATCCCAACC...GGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGGAGCCAGTACATTTaGCCAAGTGTAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SQGPAGALGTAGGWDAFWWSQYI*PSVEVQ
Trigger: TTGGACTTCTACACTTGGCCAAATGTACTGGCTCCA...CCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCATGGAGCCAGTACATTTaGCCAAGTGTAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: GPCWCPWHCRGLGCILVSWSQYI*PSVEVQ
Trigger: TTGGACTTCTACACTTGGCCAAATGTACTGGCTCCA...TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTTGGAGCCAGTACATTTaGCCAAGTGTAGAAGTCCAA +
Preference number: 4 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCWSQYI*PSVEVQ
Trigger: TTGGACTTCTACACTTGGCCAAATGTACTGGCTCCA...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGTGTTCATTGTGTGGGTaGTGGCTGAAAGGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: AGGWDAFWCQKWDQQLGPCSLCG*WLKGGK
Trigger: TTTCCCTCCTTTCAGCCACCACCCACACAATGAACA...CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTGGACTCCAGACTCACTaGCAGAGGGACTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITGLQTH*QRDSLQ
Trigger: CTGAAGAGAGTCCCTCTGCCAGTGAGTCTGGAGTCC...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR CCA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCCAGACGTCTCTAAAGTaGCAGCCTCCAGCCGGTGGG +
Preference number: 4 (lower is better)
Translates to: TCEEEVCWRLHEGSACWAQTSLK*QPPAGG
Trigger: CCCACCGGCTGGAGGCTGCCACTTTAGAGACGTCTG...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCAAACCGCCTCCACGATaGTCTCTCCAGCCTCACTCA +
Preference number: 4 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCKPPPR*SLQPHS
Trigger: TGAGTGAGGCTGGAGAGACCATCGTGGAGGCGGTTT...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp GTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTACAGCTGTTTCAGCCTaGAGAGGATTCAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: VRALLVPLALPGVGMHFGTAVSA*RGFRGN
Trigger: ATTTCCTCTGAATCCTCTCCAGGCTGAAACAGCTGT...ACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676234.1
3UTR CAA 72 bp GGCAGCCAGACTCCCCCAGAAATGGGCCCTTCCCTTTaGTTCATTGTGTGGGTGGTGGCTGAAAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GSQTPPEMGPSL*FIVWVVAERRE
Trigger: TTCCCTCCTTTCAGCCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTTCTGGGGGAGTCTGGCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CAA 72 bp ATCCCCACAGGAGTACCACTGAACACACACCTGGCTTaGAAAGTTTCATCTGGGGCAGCCCTGGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: IPTGVPLNTHLA*KVSSGAALVAS
Trigger: GGAGGCCACCAGGGCTGCCCCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp CCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGGCCCGCAAGCACAAATaGACAGCTTCTAATTTTCCC +
Preference number: 4 (lower is better)
Translates to: PGWRGQGPFHLPDSLQSGARKHK*TASNFP
Trigger: GGGAAAATTAGAAGCTGTTCATTTGTGCTTGCGGGC...CCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS-3UTR TCA 90 bp GCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGACATCCAAGAGTCTGTaGGCAGACTCTACATCCAGA +
Preference number: 4 (lower is better)
Translates to: AGALGTAGGWDAFWCQKWTSKSL*ADSTSR
Trigger: TCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGT...CCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR TCA 90 bp GTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCTCCATTTCCAAGGCTTaGAAATCCTTCCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VPLALPGVGMHFGVRSGTSISKA*KSFPGW
Trigger: CCAACCTGGGAAGGATTTTCAAGCCTTGGAAATGGA...GGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCACTGCTGACGTGTGTTTaGACTTTTCGCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPCWCPWHCRGLGCILVSLLTCV*TFRFSS
Trigger: AGAAGAAAAGCGAAAAGTTCAAACACACGTCAGCAG...TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp AGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGCCCATCCATGATGTCTaGCGGTTGGAGCACCTCATA +
Preference number: 4 (lower is better)
Translates to: RKRFAGDFMKVVPAGPGWPIHDV*RLEHLI
Trigger: TATGAGGTGCTCCAACCGTCAGACATCATGGATGGG...CCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp ATCAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCGGCTCAGCCGCCTGGTaGGCTTGGTGCCAATCTGTT +
Preference number: 4 (lower is better)
Translates to: IKTKGLPKVQDSTVQSPIGSAAW*AWCQSV
Trigger: AACAGATTGGCACCAAGCTCACCAGGCGGCTGAGCC...GATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATAGCCCTTGCAGATACATaGGACAGTCAGTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHIALADT*DSQWLE
Trigger: CTCCAGCCACTGACTGTCTCATGTATCTGCAAGGGC...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379335.8
CDS-3UTR TCA 90 bp AAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTCAATTCCCTGGCCGCTaGCCAGCTCCCACGTGGGAT +
Preference number: 4 (lower is better)
Translates to: KGPPNQMSCLEPVHLAKCQFPGR*PAPTWD
Trigger: ATCCCACGTGGGAGCTGGTCAGCGGCCAGGGAATTG...ACACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR TCA 90 bp CAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGCTCCTGGGTCCTACCTaGGAAGCTCCACTCCCACCT +
Preference number: 4 (lower is better)
Translates to: QRAPKPNVMSGASTFGQVLLGPT*EAPLPP
Trigger: AGGTGGGAGTGGAGCTTCTCAGGTAGGACCCAGGAG...CACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR TCA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGATCTCCTTGCCTAGTTaGCAGTGGATCACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: AWLERTRTVPPARQSSVRISLPS*QWITKD
Trigger: GTCCTTTGTGATCCACTGTCAACTAGGCAAGGAGAT...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR GCA 90 bp TTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTCGTTTCAGGGAGATCCTGGCCTCTaGGAGGTACGGCGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LQKVGFSPGHLCSTSSFQGDPGL*EVRRVA
Trigger: AGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCC...CTGAAACGAGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp CAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCTGCTGGGCCACACCCTaGTGGCCACTCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QLRSVHSFLASTSKGPQTCWATP*WPLFWA
Trigger: AGCCCAGAAGAGTGGCCAGCAGGGTGTGGCCCAGCA...GGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGGGAGGTTCTTGAGGACAGTGTGGTGGTaGTGGGCCACACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CQRCRIQQSNLPSSGRFLRTVWW*WATPCW
Trigger: CCAGCAGGGTGTGGCCCAGCACCACCACACTGTCCT...CAAGAACCTCCCTGAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCAGGACAGTGTGGTGGTaGTGGGCCACACCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGRTVWW*WATPCW
Trigger: CCAGCAGGGTGTGGCCCAGCACCACCACACTGTCCT...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATCCGTGGCTGCCGTACTaGAGCTGGTGCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHPWLPY*SWCWIW
Trigger: CCAGATCCAGCACCAGCTGCAGTACGGCAGCCACGG...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp ACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCACCGTGGCTGCCGTACTaGAGCTGGTGCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: TSKGPQTKCHVWSQYIWPPWLPY*SWCWIW
Trigger: CCAGATCCAGCACCAGCTGCAGTACGGCAGCCACGG...TGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGACACGCTCCTCATCCGTCTaGCTGGGAAGGATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: VCWRLHEGSACWAWLERTRSSSV*LGRMFF
Trigger: AAAGAACATCCTTCCCAGGCAGACGGATGAGGAGCG...TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACCGCTCCTCATCCGTCTaGCTGGGAAGGATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: SEVGPAARTAEPSLLRFHRSSSV*LGRMFF
Trigger: AAAGAACATCCTTCCCAGGCAGACGGATGAGGAGCG...GTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATAACGGCTTATCTGCCCTaGGGTCATAGTCCTGAGCGT +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHITAYLP*GHSPER
Trigger: ACGCTCAGGACTATGACCGCAGGGCAGATAAGCCGT...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACATGCCGGGGGTTGGGATaGATTTTGGTGTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: QKWDQQLGPPSHHFCVFTCRGLG*ILVSEV
Trigger: CACTTCTGACACCAAAATGCATCCCAACCCCCGGCA...TGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AAATGGGCCCTTCCCTTTTGTTCATTGTGTGGGTGGTGGCTGAAAGGAGGGAAACTTCAGTCAGGGCCCTaGTGGTGCCCTTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: KWALPFCSLCGWWLKGGKLQSGP*WCPWHC
Trigger: GCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAG...TTTCCCTCCTTTCAGCCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCTTCAGTCAGGGCCCTaGTGGTGCCCTTGGCACTGC +
Preference number: 4 (lower is better)
Translates to: LLLGINFKGPPNQMSCLELQSGP*WCPWHC
Trigger: GCAGTGCCAAGGGCACCAGCAGGGCCCTGACTGAAG...CTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAAGGACCGTTCCACCTaGCAGACAGTCTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: RKRFAGDFMKVVPAGPGWKDRST*QTVFSQ
Trigger: CTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTT...CCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AAATGGGCCCTTCCCTTTTGTTCATTGTGTGGGTGGTGGCTGAAAGGAGGGAAATGGGGTGTGGGTGCCTaGGACGAGGGAGTCAGAACG +
Preference number: 4 (lower is better)
Translates to: KWALPFCSLCGWWLKGGKWGVGA*DEGVRT
Trigger: CGTTCTGACTCCCTCGTCCCAGGCACCCACACCCCA...TTTCCCTCCTTTCAGCCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTGGGGTGTGGGTGCCTaGGACGAGGGAGTCAGAACG +
Preference number: 4 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHWGVGA*DEGVRT
Trigger: CGTTCTGACTCCCTCGTCCCAGGCACCCACACCCCA...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTGGGCCACACCCTGCTaGCCACTCTTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHWATPC*PLFWAV
Trigger: CACAGCCCAGAAGAGTGGCCAGCAGGGTGTGGCCCA...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATGTCAGGGCAGGACAGTGTGGTaGTGCTGGGCCACACCCTGC +
Preference number: 4 (lower is better)
Translates to: ASVFPNIIMMLDCQGECQGRTVW*CWATPC
Trigger: GCAGGGTGTGGCCCAGCACCACCACACTGTCCTGCC...CTGACATTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp AGTGAAACTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCGAGGGCAGGACAGTGTaGTGGTGCTGGGCCACACCC +
Preference number: 4 (lower is better)
Translates to: SETQTLQKVGFSPGHLCSEGRTV*WCWATP
Trigger: GGGTGTGGCCCAGCACCACCACACTGTCCTGCCCTC...GGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAGTTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp CTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAACTGCCGTACTGCAGCTaGTGCTGGATCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LQRAPKPNVMSGASTFGQLPYCS*CWIWEG
Trigger: GCCCTCCCAGATCCAGCACCAGCTGCAGTACGGCAG...TTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCACTTGTCTTATTTCTaGAAGGCCCATAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGWRGQGPFHLPDSLQSGHLSYF*KAHRSC
Trigger: GCAGGACCTATGGGCCTTCCAGAAATAAGACAAGTG...CCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCTCATCCGTCTGCCTaGGAAGGATGTTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PGWRGQGPFHLPDSLQSGPHPSA*EGCSFL
Trigger: AAGAAAAGAACATCCTTCCCAGGCAGACGGATGAGG...CCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCCTCATCCGTCTGCCTaGGAAGGATGTTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RTRTVPPARQSSVRALLVPHPSA*EGCSFL
Trigger: AAGAAAAGAACATCCTTCCCAGGCAGACGGATGAGG...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGTCTGCAGTTGGCCTCTaGCTCAGCCGCCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWSAVGL*LSRLVS
Trigger: GCTCACCAGGCGGCTGAGCCAGAGGCCAACTGCAGA...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTCTGCAGTTGGCCTCTaGCTCAGCCGCCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHSAVGL*LSRLVS
Trigger: GCTCACCAGGCGGCTGAGCCAGAGGCCAACTGCAGA...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCTCTGCAGTTGGCCTCTaGCTCAGCCGCCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: QLRSVHSFLASTSKGPQTSAVGL*LSRLVS
Trigger: GCTCACCAGGCGGCTGAGCCAGAGGCCAACTGCAGA...GGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ATCAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCCAGTTCCTCTGCAGTTaGCCTCTGGCTCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: IKTKGLPKVQDSTVQSPIQFLCS*PLAQPP
Trigger: AGGCGGCTGAGCCAGAGGCCAACTGCAGAGGAACTG...GATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATATTTTGGTGTCAGAAGTaGGACCAGCAGCTCGGACCG +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHIFWCQK*DQQLGP
Trigger: CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCCTGCTGGGCCTGGCTaGAGAGGACAAGGACCGTTC +
Preference number: 4 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGPAGPG*RGQGPF
Trigger: GAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGCAGG...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCCCTGCTGGGCCTGGCTaGAGAGGACAAGGACCGTTC +
Preference number: 4 (lower is better)
Translates to: REKPGATEKCSLLLGINFPAGPG*RGQGPF
Trigger: GAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGCAGG...GAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCTGGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGCCCTTCAGCTTTCTTTaGACTCAGATGACAGACACT +
Preference number: 4 (lower is better)
Translates to: AGPGWRGQGPFHLPDSLQPFSFL*TQMTDT
Trigger: AGTGTCTGTCATCTGAGTCCAAAGAAAGCTGAAGGG...CTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGTGTTCACTCCTTCTTaGCATCAACTTCAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTVFTPS*HQLQRA
Trigger: GGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACAC...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGCTTTTGTTCATTGTGTaGGTGGTGGCTGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: AWLERTRTVPPARQSSVRLLFIV*VVAERR
Trigger: CCTCCTTTCAGCCACCACCCACACAATGAACAAAAG...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
3UTR CAA 72 bp ATTCAACAGTCCAATCTCCCATCTTCAGGGAGGTTCTaGACCGTGAGAGGGAGGTGCGAGCTTCCCACCGTC +
Preference number: 4 (lower is better)
Translates to: IQQSNLPSSGRF*TVRGRCELPTV
Trigger: GACGGTGGGAAGCTCGCACCTCCCTCTCACGGTCAAGAACCTCCCTGAAGATGGGAGATTGGACTGTTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTGGCCAGCGTTTTGTTaGGCTCGTCTATCATTCTGC +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITWPAFC*ARLSFC
Trigger: GCAGAATGATAGACGAGCTCAACAAAACGCTGGCCA...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCTGGCCAGCGTTTTGTTaGGCTCGTCTATCATTCTGC +
Preference number: 4 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCWPAFC*ARLSFC
Trigger: GCAGAATGATAGACGAGCTCAACAAAACGCTGGCCA...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTCGTTTCAGCTTTGTCTGCAGCGGTaGGGCGGGTCCACGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LQKVGFSPGHLCSTSSFQLCLQR*GGSTAY
Trigger: ATAAGCCGTGGACCCGCCTCACCGCTGCAGACAAAG...CTGAAACGAGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGTTCTTTGGACTCAGATaGCAGACACTTGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: AWLERTRTVPPARQSSVRFFGLR*QTLVRK
Trigger: CTTCCTCACAAGTGTCTGTCATCTGAGTCCAAAGAA...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGAATGTCAGGGAATAACAGAAGTGGTCCACTTTGGAAGTCCCGTGTGGATGTGCCGTGGCTGCCGTACTaGAGCTGGTGCTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RMSGNNRSGPLWKSRVDVPWLPY*SWCWIW
Trigger: CCAGATCCAGCACCAGCTGCAGTACGGCAGCCACGG...CACATCCACACGGGACTTCCAAAGTGGACCACTTCTGTTATTCCCTGACATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp AAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTGAACAGGGGACCCGCTaGTCAGAGCTTTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KGPPNQMSCLEPVHLAKCEQGTR*SELSSL
Trigger: GAGGCTGGAAAGCTCTGAGCAGCGGGTCCCCTGTTC...ACACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp ATCAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCGGTCCACGGCTTATCTaGCCTGCGGTCATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: IKTKGLPKVQDSTVQSPIGPRLI*PAVIVL
Trigger: CAGGACTATGACCGCAGGGCAGATAAGCCGTGGACC...GATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp CAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGGGTCCACGGCTTATCTaGCCTGCGGTCATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: QRAPKPNVMSGASTFGQVGPRLI*PAVIVL
Trigger: CAGGACTATGACCGCAGGGCAGATAAGCCGTGGACC...CACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCGATGGCAGCTTTGTCTaGAGCGGTGAGGCGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSDGSFV*SGEAGP
Trigger: TGGACCCGCCTCACCGCTGCAGACAAAGCTGCCATC...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGGGAGGTTCTTGACCGTGATGGCAGCTTTGTCTaGAGCGGTGAGGCGGGTCCA +
Preference number: 4 (lower is better)
Translates to: KVQDSTVQSPIFREVLDRDGSFV*SGEAGP
Trigger: TGGACCCGCCTCACCGCTGCAGACAAAGCTGCCATC...ACGGTCAAGAACCTCCCTGAAGATGGGAGATTGGACTGTTGAATCCTGCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp AAATGGGCCCTTCCCTTTTGTTCATTGTGTGGGTGGTGGCTGAAAGGAGGGAAATGGTGCCCTTGGCACTaGCGGGGGTTGGGATGCATT +
Preference number: 4 (lower is better)
Translates to: KWALPFCSLCGWWLKGGKWCPWH*RGLGCI
Trigger: AATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCA...TTTCCCTCCTTTCAGCCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGACCGTGAGAGGGAGGTaGGAGCTTCCCACCGTCATC +
Preference number: 4 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWTVRGR*ELPTVI
Trigger: GATGACGGTGGGAAGCTCGCACCTCCCTCTCACGGT...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp CTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACAAATCCTTCCCAGGTTaGCAAACTTACTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LPGVGMHFGVRSGTSSSDKSFPG*QTYFSC
Trigger: GCAGGAGAAGTAAGTTTGCCAACCTGGGAAGGATTT...GTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAGCAGAGACAGCTGGCTaGAGCTCAGGGACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: TSKGPQTKCHVWSQYIWPAETAG*SSGTAH
Trigger: ATGGGCAGTCCCTGAGCTCCAGCCAGCTGTCTCTGC...TGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTGCAGAGACAGCTGGCTaGAGCTCAGGGACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LRLCRKLVLARAICVPLPAETAG*SSGTAH
Trigger: ATGGGCAGTCCCTGAGCTCCAGCCAGCTGTCTCTGC...AGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCCTGGGCATTGGGACTaGCTCCATTTCGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSPGHWD*LHFGQG
Trigger: GCCCTGTCCGAAATGGAGCCAGTCCCAATGCCCAGG...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGCCTGGGCATTGGGACTaGCTCCATTTCGGACAGGGC +
Preference number: 4 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWPGHWD*LHFGQG
Trigger: GCCCTGTCCGAAATGGAGCCAGTCCCAATGCCCAGG...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp ACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGAATGATGTCTGACGGTTaGAGCACCTCATATGAGCAG +
Preference number: 4 (lower is better)
Translates to: TAGGWDAFWCQKWDQQLGMMSDG*STSYEQ
Trigger: CTGCTCATATGAGGTGCTCCAACCGTCAGACATCAT...TCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TTCAGCTTTCTTTGGACTCAGATGACAGACACTTGTGAGGAAGAGGTTTGCTGGGGCAGGACAGTGTGGTaGTGCTGGGCCACACCCTGC +
Preference number: 4 (lower is better)
Translates to: FSFLWTQMTDTCEEEVCWGRTVW*CWATPC
Trigger: GCAGGGTGTGGCCCAGCACCACCACACTGTCCTGCC...CCAGCAAACCTCTTCCTCACAAGTGTCTGTCATCTGAGTCCAAAGAAAGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGCACTTGTCTTATTTCTaGAAGGCCCATAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: EVCWRLHEGSACWAWLERHLSYF*KAHRSC
Trigger: GCAGGACCTATGGGCCTTCCAGAAATAAGACAAGTG...CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGTCATGGCCAGGGAGCTaGTGTATAATGAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: EEEVCWRLHEGSACWAWLSWPGS*CIMSCR
Trigger: ACGACAGCTCATTATACACCAGCTCCCTGGCCATGA...CAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTCATGGCCAGGGAGCTaGTGTATAATGAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITSWPGS*CIMSCR
Trigger: ACGACAGCTCATTATACACCAGCTCCCTGGCCATGA...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGATCTGCAGTTGGCCTCTaGCTCAGCCGCCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGSAVGL*LSRLVS
Trigger: GCTCACCAGGCGGCTGAGCCAGAGGCCAACTGCAGA...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCCAGTTCCTCTGCAGTTaGCCTCTGGCTCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: QLRSVHSFLASTSKGPQTQFLCS*PLAQPP
Trigger: AGGCGGCTGAGCCAGAGGCCAACTGCAGAGGAACTG...GGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGACCTGCTGGGCCTGGCTaGAGAGGACAAGGACCGTTC +
Preference number: 4 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGPAGPG*RGQGPF
Trigger: GAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGCAGG...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCGAAGGTAGTGCCTGCTaGGCCTGGCTGGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: QLRSVHSFLASTSKGPQTEGSAC*AWLERT
Trigger: TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTC...GGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGAGGAAGAGGTTTGCTaGAGACTTCATGAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: AGALGTAGGWDAFWCQKWEEEVC*RLHEGS
Trigger: ACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTC...CCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGGAGGAAGAGGTTTGCTaGAGACTTCATGAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PGWRGQGPFHLPDSLQSGEEEVC*RLHEGS
Trigger: ACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTC...CCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGACCAAATGTCATGTCTaGAGCCAGTACATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RTRTVPPARQSSVRALLVTKCHV*SQYIWP
Trigger: TGGCCAAATGTACTGGCTCCAGACATGACATTTGGT...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCACCAAATGTCATGTCTaGAGCCAGTACATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: WRGQGPFHLPDSLQSGPCTKCHV*SQYIWP
Trigger: TGGCCAAATGTACTGGCTCCAGACATGACATTTGGT...GCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGAGTGTTCACTCCTTCTTaGCATCAACTTCAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TAGGWDAFWCQKWDQQLGVFTPS*HQLQRA
Trigger: GGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACAC...TCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACAGACTCCCCCAGAAATaGGCCCTTCCCTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SEVGPAARTAEPSLLRFHRLPQK*ALPFCS
Trigger: TGAACAAAAGGGAAGGGCCCATTTCTGGGGGAGTCT...GTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTGTAGCAGGACTGGTTTaGCTGAAGGATCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITVAGLV*LKDLGT
Trigger: TGTCCCAAGATCCTTCAGCCAAACCAGTCCTGCTAC...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR CCA 90 bp AAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCCTCCTGCCATCAGCCTaGATCCAGCAGCAAGGTGCA +
Preference number: 4 (lower is better)
Translates to: KTKGLPKVQDSTVQSPIFLLPSA*IQQQGA
Trigger: TGCACCTTGCTGCTGGATCCAGGCTGATGGCAGGAG...GAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp CTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACGAAGAATCTTTGAGCTaGCTCAACATCCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LPGVGMHFGVRSGTSSSDEESLS*LNIQES
Trigger: AGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTC...GTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR TCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGAAGAATCTTTGAGCTaGCTCAACATCCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTEESLS*LNIQES
Trigger: AGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTC...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR TCA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGTCCATTTCCAAGGCTTaGAAATCCTTCCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EEVCWRLHEGSACWAWLESISKA*KSFPGW
Trigger: CCAACCTGGGAAGGATTTTCAAGCCTTGGAAATGGA...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCTGCTGACGTGTGTTTaGACTTTTCGCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RTRTVPPARQSSVRALLVLLTCV*TFRFSS
Trigger: AGAAGAAAAGCGAAAAGTTCAAACACACGTCAGCAG...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCCTGCTGACGTGTGTTTaGACTTTTCGCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTLLTCV*TFRFSS
Trigger: AGAAGAAAAGCGAAAAGTTCAAACACACGTCAGCAG...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GGAGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTGATCTGGCCCATCCATaGTGTCTGACGGTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GGKSQGQLRSVHSFLASTDLAHP*CLTVGA
Trigger: TGCTCCAACCGTCAGACATCATGGATGGGCCAGATC...AGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGAGAGTCTTCGTAGTCTaGCTCATGAGGCACATTTTC +
Preference number: 4 (lower is better)
Translates to: EVCWRLHEGSACWAWLERRVFVV*LMRHIF
Trigger: GAAAATGTGCCTCATGAGTCAGACTACGAAGACTCT...CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCTCCACCGTGGGCCTTTaGCTGAGCTTTCGGGTTAGC +
Preference number: 4 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGSTVGL*LSFRVS
Trigger: GCTAACCCGAAAGCTCAGTCAAAGGCCCACGGTGGA...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTTCCACCGTGGGCCTTTaGCTGAGCTTTCGGGTTAGC +
Preference number: 4 (lower is better)
Translates to: LRLCRKLVLARAICVPLPSTVGL*LSFRVS
Trigger: GCTAACCCGAAAGCTCAGTCAAAGGCCCACGGTGGA...AGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp ACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCATCCACCGTGGGCCTTTaGCTGAGCTTTCGGGTTAGC +
Preference number: 4 (lower is better)
Translates to: TSKGPQTKCHVWSQYIWPSTVGL*LSFRVS
Trigger: GCTAACCCGAAAGCTCAGTCAAAGGCCCACGGTGGA...TGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp ACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGATTCTTTGGACTCAGATaGCAGACACTTGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TAGGWDAFWCQKWDQQLGFFGLR*QTLVRK
Trigger: CTTCCTCACAAGTGTCTGTCATCTGAGTCCAAAGAA...TCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCATTTGAACTGAGCATATaGCATCTTTCCCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: GPCWCPWHCRGLGCILVSFELSI*HLSPSK
Trigger: TTTAGAAGGGGAAAGATGTCATATGCTCAGTTCAAA...TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TTCAGCTTTCTTTGGACTCAGATGACAGACACTTGTGAGGAAGAGGTTTGCTGGAACCCCTCCTGGGTGTaGCCTGCGGGTACTCAGACG +
Preference number: 4 (lower is better)
Translates to: FSFLWTQMTDTCEEEVCWNPSWV*PAGTQT
Trigger: CGTCTGAGTACCCGCAGGTCACACCCAGGAGGGGTT...CCAGCAAACCTCTTCCTCACAAGTGTCTGTCATCTGAGTCCAAAGAAAGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR TCA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCGCCACCCATCTGGCATaGAGGGTCCATTTTATCCCT +
Preference number: 4 (lower is better)
Translates to: TCEEEVCWRLHEGSACWAATHLA*RVHFIP
Trigger: AGGGATAAAATGGACCCTTCATGCCAGATGGGTGGC...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR GCA 90 bp ATGATGCTGGACTGTCAGGGAGAATGTCAGGGAATAACAGAAGTGGTCCACTTTTGCTGGGCCACACCCTaGTGGCCACTCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: MMLDCQGECQGITEVVHFCWATP*WPLFWA
Trigger: AGCCCAGAAGAGTGGCCAGCAGGGTGTGGCCCAGCA...AAAGTGGACCACTTCTGTTATTCCCTGACATTCTCCCTGACAGTCCAGCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp AAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCACCGTACTGCAGCTGGTaGTGGATCTGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KCSLLLGINFKGPPNQMSPYCSW*WIWEGR
Trigger: CCTGCCCTCCCAGATCCAGCACCAGCTGCAGTACGG...TGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGGCTCGTCTATCATTCTaGAGCCCGAGGGGTGCATGG +
Preference number: 4 (lower is better)
Translates to: LLLGINFKGPPNQMSCLEARLSF*SPRGAW
Trigger: CCATGCACCCCTCGGGCTGCAGAATGATAGACGAGC...CTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AAATGGGCCCTTCCCTTTTGTTCATTGTGTGGGTGGTGGCTGAAAGGAGGGAAAGCTCGTCTATCATTCTaGAGCCCGAGGGGTGCATGG +
Preference number: 4 (lower is better)
Translates to: KWALPFCSLCGWWLKGGKARLSF*SPRGAW
Trigger: CCATGCACCCCTCGGGCTGCAGAATGATAGACGAGC...TTTCCCTCCTTTCAGCCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGCTCGTCTATCATTCTaGAGCCCGAGGGGTGCATGG +
Preference number: 4 (lower is better)
Translates to: LQRAPKPNVMSGASTFGQARLSF*SPRGAW
Trigger: CCATGCACCCCTCGGGCTGCAGAATGATAGACGAGC...TTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TCAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTGAGCTTTCCAGCCTCTaGATGGTCATGGCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: SRPRGCQRCRIQQSNLPSELSSL*MVMASV
Trigger: AACGCTGGCCATGACCATGCAGAGGCTGGAAAGCTC...AGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp CAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGAAGGCCCATAGGTCCTaGTTTGGTGACCCCATCACC +
Preference number: 4 (lower is better)
Translates to: QRAPKPNVMSGASTFGQVKAHRS*FGDPIT
Trigger: GGTGATGGGGTCACCAAAGCAGGACCTATGGGCCTT...CACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTTGTGAGGAAGAGGTTTaGTGGAGACTTCATGAAGGT +
Preference number: 4 (lower is better)
Translates to: LLVPLALPGVGMHFGVRSCEEEV*WRLHEG
Trigger: ACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACA...ACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCAGGGAGCAGGATGGGTaGTCAGTGCCAGCCTTCGTA +
Preference number: 4 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSREQDG*SVPAFV
Trigger: TACGAAGGCTGGCACTGAGCACCCATCCTGCTCCCT...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTTGAGAAGGGGCAGCTaGTTCACTGGGGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TCEEEVCWRLHEGSACWALRRGS*FTGVSS
Trigger: TGAAGAGACCCCAGTGAAGCAGCTGCCCCTTCTCAA...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR GCA 90 bp TGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTGTCTCCAAGGAGTCCTaGGTTTTACTTGACATTGGA +
Preference number: 4 (lower is better)
Translates to: WCQKWDQQLGPPSHHFCVVSKES*VLLDIG
Trigger: TCCAATGTCAAGTAAAACGCAGGACTCCTTGGAGAC...AACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAATGCCGCCATTAATGTaGGAGGCAGGAGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: TSKGPQTKCHVWSQYIWPMPPLM*EAGAGS
Trigger: CGACCCTGCTCCTGCCTCCCACATTAATGGCGGCAT...TGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR CCA 90 bp AAATGGGCCCTTCCCTTTTGTTCATTGTGTGGGTGGTGGCTGAAAGGAGGGAAAATGCCGCCATTAATGTaGGAGGCAGGAGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: KWALPFCSLCGWWLKGGKMPPLM*EAGAGS
Trigger: CGACCCTGCTCCTGCCTCCCACATTAATGGCGGCAT...TTTCCCTCCTTTCAGCCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR CCA 90 bp AAACTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTACGGCGTGTCGCTCTTaGAGCGCACTCTCCGGATGG +
Preference number: 4 (lower is better)
Translates to: KLRLCRKLVLARAICVPLTACRS*SALSGW
Trigger: CCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGT...AAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp CTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATTAGCTTTGTGGGCCACACCCTGCTaGCCACTCTTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LEPVHLAKCRSPTRSLALWATPC*PLFWAV
Trigger: CACAGCCCAGAAGAGTGGCCAGCAGGGTGTGGCCCA...CAAAGCTAATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATCTGCCGTACTGCAGCTaGTGCTGGATCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: CHVWSQYIWPSVEVQPDHLPYCS*CWIWEG
Trigger: GCCCTCCCAGATCCAGCACCAGCTGCAGTACGGCAG...ATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAGACATGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GGAGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTAGCTGTGGTAAGAAGTaGAACAGGGGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GGKSQGQLRSVHSFLASTSCGKK*NRGPAA
Trigger: AGCAGCGGGTCCCCTGTTCCACTTCTTACCACAGCT...AGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCCCTCATCCGTCTGCCTaGGAAGGATGTTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCPHPSA*EGCSFL
Trigger: AAGAAAAGAACATCCTTCCCAGGCAGACGGATGAGG...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCGGCACTGCCGGGGGTTaGGATGCATTTTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: QLRSVHSFLASTSKGPQTGTAGG*DAFWCQ
Trigger: CTGACACCAAAATGCATCCCAACCCCCGGCAGTGCC...GGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGAAGGTAGTGCCTGCTaGGCCTGGCTGGAGAGGACA +
Preference number: 4 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGEGSAC*AWLERT
Trigger: TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTC...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTCCCTTCAGCTTTCTTTaGACTCAGATGACAGACACT +
Preference number: 4 (lower is better)
Translates to: WCQKWDQQLGPPSHHFCVPFSFL*TQMTDT
Trigger: AGTGTCTGTCATCTGAGTCCAAAGAAAGCTGAAGGG...AACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACAGTGTTCACTCCTTCTTaGCATCAACTTCAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: QKWDQQLGPPSHHFCVFTVFTPS*HQLQRA
Trigger: GGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACAC...TGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGCTTTTGTTCATTGTGTaGGTGGTGGCTGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: EEVCWRLHEGSACWAWLELLFIV*VVAERR
Trigger: CCTCCTTTCAGCCACCACCCACACAATGAACAAAAG...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATAGAGACAGTCAGTGGCTaGAGTTCTTGTTCCATCCTG +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHIETVSG*SSCSIL
Trigger: CAGGATGGAACAAGAACTCCAGCCACTGACTGTCTC...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379335.8
CDS-3UTR CCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCGTTGTTGTTGTTGTTaGGGGCGGGCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGRCCCC*GRAPSG
Trigger: CCCTGAAGGAGCCCGCCCCCAACAACAACAACAACG...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR CCA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGCCAGGATCTGTTAAGTaGTTGGCAATCCTGGTAGTG +
Preference number: 4 (lower is better)
Translates to: EEVCWRLHEGSACWAWLEPGSVK*LAILVV
Trigger: CACTACCAGGATTGCCAACCACTTAACAGATCCTGG...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR TCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCTTGGAGCACCTCATATaGGCAGGGATCCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSLEHLI*AGIPGH
Trigger: ATGCCCAGGGATCCCTGCTCATATGAGGTGCTCCAA...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTGATCTGGCCCATCCATaGTGTCTGACGGTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LRLCRKLVLARAICVPLPDLAHP*CLTVGA
Trigger: TGCTCCAACCGTCAGACATCATGGATGGGCCAGATC...AGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp AAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCACTTTGTCTGCAGCGGTaGGGCGGGTCCACGGCTTAT +
Preference number: 4 (lower is better)
Translates to: KCSLLLGINFKGPPNQMSLCLQR*GGSTAY
Trigger: ATAAGCCGTGGACCCGCCTCACCGCTGCAGACAAAG...TGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCTGGACACAGTTGGGTTaGTTATTTGAACTGAGCATA +
Preference number: 4 (lower is better)
Translates to: CRGLGCILVSEVGPAARTWTQLG*LFELSI
Trigger: TATGCTCAGTTCAAATAATCAACCCAACTGTGTCCA...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674637.1
CDS-3UTR TCA 90 bp AGTTCAGAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGCCTCCCCGGCTTCGCTaGGCGCGTGGGCTCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SSEDLHRNGEVNKYQHLWPPRLR*ARGLRH
Trigger: ATGGCGGAGCCCACGCGCTCAGCGAAGCCGGGGAGG...CCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTCTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR GCA 90 bp AAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGGGAGGTTCTTGACCGTCTGGAGCTCAGGGACTaGCCATTTTCTAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: KVQDSTVQSPIFREVLDRLELRD*PFSRES
Trigger: GGACTCCCTAGAAAATGGGCAGTCCCTGAGCTCCAG...ACGGTCAAGAACCTCCCTGAAGATGGGAGATTGGACTGTTGAATCCTGCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCTGGAGCTCAGGGACTaGCCATTTTCTAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSLELRD*PFSRES
Trigger: GGACTCCCTAGAAAATGGGCAGTCCCTGAGCTCCAG...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATGAGCTTTCCAGCCTCTaGATGGTCATGGCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHELSSL*MVMASV
Trigger: AACGCTGGCCATGACCATGCAGAGGCTGGAAAGCTC...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AAATGGGCCCTTCCCTTTTGTTCATTGTGTGGGTGGTGGCTGAAAGGAGGGAAAAAGGCCCATAGGTCCTaGTTTGGTGACCCCATCACC +
Preference number: 4 (lower is better)
Translates to: KWALPFCSLCGWWLKGGKKAHRS*FGDPIT
Trigger: GGTGATGGGGTCACCAAAGCAGGACCTATGGGCCTT...TTTCCCTCCTTTCAGCCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCAAGGCCCATAGGTCCTaGTTTGGTGACCCCATCACC +
Preference number: 4 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGKAHRS*FGDPIT
Trigger: GGTGATGGGGTCACCAAAGCAGGACCTATGGGCCTT...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCTAAGGAGTCCTTCCTaGAGACCTTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSLRSPS*RPSWPG
Trigger: CCCTGGCCATGAAGGTCTGCAGGAAGGACTCCTTAG...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCCGCTCCTCATCCGTCTaGCTGGGAAGGATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: KTKGLPKVQDSTVQSPIFRSSSV*LGRMFF
Trigger: AAAGAACATCCTTCCCAGGCAGACGGATGAGGAGCG...GAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp AGAATGTCAGGGAATAACAGAAGTGGTCCACTTTGGAAGTCCCGTGTGGATGTGTTGGTGCCAATCTGTTaGCTCAGCTCCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RMSGNNRSGPLWKSRVDVLVPIC*LSSSRS
Trigger: GGAGCGGCTGGAGCTGAGGCAACAGATTGGCACCAA...CACATCCACACGGGACTTCCAAAGTGGACCACTTCTGTTATTCCCTGACATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp CTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTACGGCTTATCTGCCCTaGGGTCATAGTCCTGAGCGT +
Preference number: 4 (lower is better)
Translates to: LRLCRKLVLARAICVPLPTAYLP*GHSPER
Trigger: ACGCTCAGGACTATGACCGCAGGGCAGATAAGCCGT...AGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp TTCAGCTTTCTTTGGACTCAGATGACAGACACTTGTGAGGAAGAGGTTTGCTGGCATGAAGGTAGTGCCTaGTGGGCCTGGCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FSFLWTQMTDTCEEEVCWHEGSA*WAWLER
Trigger: CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATG...CCAGCAAACCTCTTCCTCACAAGTGTCTGTCATCTGAGTCCAAAGAAAGCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCTGTGAGGAAGAGGTTTaGTGGAGACTTCATGAAGGT +
Preference number: 4 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCCEEEV*WRLHEG
Trigger: ACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACA...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTAATTTCCTCGGCCCTTaGAGATACATGAGACAGTCA +
Preference number: 4 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITNFLGP*RYMRQS
Trigger: TGACTGTCTCATGTATCTGCAAGGGCCGAGGAAATT...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379335.8
CDS-3UTR GCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATATTGGAGGCAACCGGTTaGAGAAACAGGGAACATTTC +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHILEATG*RNREHF
Trigger: GAAATGTTCCCTGTTTCTGCAACCGGTTGCCTCCAA...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR GCA 90 bp GGAGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTCCTCAGCTTAAAGGCTaGCCAAAGCTCTTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GGKSQGQLRSVHSFLASTPQLKG*PKLFAP
Trigger: GGGAGCAAAGAGCTTTGGGCAGCCTTTAAGCTGAGG...AGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAAATCCTTCCCAGGTTaGCAAACTTACTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EEVCWRLHEGSACWAWLEKSFPG*QTYFSC
Trigger: GCAGGAGAAGTAAGTTTGCCAACCTGGGAAGGATTT...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATGTCAGTACTGCAGCTGGTGCTaGATCTGGGAGGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: ASVFPNIIMMLDCQGECQYCSWC*IWEGRT
Trigger: TGTCCTGCCCTCCCAGATCCAGCACCAGCTGCAGTA...CTGACATTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp AAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTAGCTGTGGTAAGAAGTaGAACAGGGGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: KGPPNQMSCLEPVHLAKCSCGKK*NRGPAA
Trigger: AGCAGCGGGTCCCCTGTTCCACTTCTTACCACAGCT...ACACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ATCAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTCCTGCAGACCTTCATaGCCAGGGAGCTGGTGTATA +
Preference number: 4 (lower is better)
Translates to: IKTKGLPKVQDSTVQSPISCRPS*PGSWCI
Trigger: TATACACCAGCTCCCTGGCCATGAAGGTCTGCAGGA...GATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCTTTTGGTGTCAGAAGTaGGACCAGCAGCTCGGACCG +
Preference number: 4 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGFWCQK*DQQLGP
Trigger: CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGGAGGAAGAGGTTTGCTaGAGACTTCATGAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: EEVCWRLHEGSACWAWLEEEEVC*RLHEGS
Trigger: ACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTC...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATATGTTCATTGTGTGGGTaGTGGCTGAAAGGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHICSLCG*WLKGGK
Trigger: TTTCCCTCCTTTCAGCCACCACCCACACAATGAACA...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GTCCAATCTCCCATCTTCAGGGAGGTTCTTGACCGTGAGAGGGAGGTGCGAGCTCTCATGTCCCACAAGTaGGAGAGCTTTATTTGGAGA +
Preference number: 4 (lower is better)
Translates to: VQSPIFREVLDREREVRALMSHK*ESFIWR
Trigger: TCTCCAAATAAAGCTCTCCCACTTGTGGGACATGAG...AGCTCGCACCTCCCTCTCACGGTCAAGAACCTCCCTGAAGATGGGAGATTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp AAATGGGCCCTTCCCTTTTGTTCATTGTGTGGGTGGTGGCTGAAAGGAGGGAAATCACCGTGGACTAGGTaGCCACCCATCTGGCATGAA +
Preference number: 4 (lower is better)
Translates to: KWALPFCSLCGWWLKGGKSPWTR*PPIWHE
Trigger: TTCATGCCAGATGGGTGGCCACCTAGTCCACGGTGA...TTTCCCTCCTTTCAGCCACCACCCACACAATGAACAAAAGGGAAGGGCCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCGGATTCAACTCACCGTaGACTAGGTGGCCACCCATC +
Preference number: 4 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGGFNSP*TRWPPI
Trigger: GATGGGTGGCCACCTAGTCCACGGTGAGTTGAATCC...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATATCTGGGTCTGTTTCCTaGCTTTCCAATAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHISGSVS*LSNSCA
Trigger: AGCACAGCTATTGGAAAGCCAGGAAACAGACCCAGA...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR TCA 90 bp GTGAAACTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCATTGGAGCACCTCATATaGGCAGGGATCCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VKLRLCRKLVLARAICVPLEHLI*AGIPGH
Trigger: ATGCCCAGGGATCCCTGCTCATATGAGGTGCTCCAA...TGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp CTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCCATCCATGATGTCTaGCGGTTGGAGCACCTCATA +
Preference number: 4 (lower is better)
Translates to: LLLGINFKGPPNQMSCLEPIHDV*RLEHLI
Trigger: TATGAGGTGCTCCAACCGTCAGACATCATGGATGGG...CTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATATTCTTTGGACTCAGATaGCAGACACTTGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHIFFGLR*QTLVRK
Trigger: CTTCCTCACAAGTGTCTGTCATCTGAGTCCAAAGAA...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTTTGAACTGAGCATATaGCATCTTTCCCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: WRGQGPFHLPDSLQSGPCFELSI*HLSPSK
Trigger: TTTAGAAGGGGAAAGATGTCATATGCTCAGTTCAAA...GCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGAATGTCAGGGAATAACAGAAGTGGTCCACTTTGGAAGTCCCGTGTGGATGTGCAAACTTACTTCTCCTaGGGATGGGTGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RMSGNNRSGPLWKSRVDVQTYFS*GWVGCG
Trigger: CCCACACCCCACCCATCCGCAGGAGAAGTAAGTTTG...CACATCCACACGGGACTTCCAAAGTGGACCACTTCTGTTATTCCCTGACATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp AGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTCGTTTCAGTAACCTAAGGAGTCCTTCCTaGAGACCTTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RKLVLARAICVPLPRFSNLRSPS*RPSWPG
Trigger: CCCTGGCCATGAAGGTCTGCAGGAAGGACTCCTTAG...GTTACTGAAACGAGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp GTGAAACTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTGTTCCAGTTCCTCTaGAGTTGGCCTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VKLRLCRKLVLARAICVPLFQFL*SWPLAQ
Trigger: CTGAGCCAGAGGCCAACTGCAGAGGAACTGGAACAG...TGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAGTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp AAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGTCCACGGCTTATCTaGCCTGCGGTCATAGTCCTG +
Preference number: 4 (lower is better)
Translates to: KSQGQLRSVHSFLASTSKGPRLI*PAVIVL
Trigger: CAGGACTATGACCGCAGGGCAGATAAGCCGTGGACC...CTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTAAGGACCGTTCCACCTaGCAGACAGTCTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: KGPPNQMSCLEPVHLAKCKDRST*QTVFSQ
Trigger: CTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTT...ACACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ATGATGCTGGACTGTCAGGGAGAATGTCAGGGAATAACAGAAGTGGTCCACTTTATGCCGCCATTAATGTaGGAGGCAGGAGCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: MMLDCQGECQGITEVVHFMPPLM*EAGAGS
Trigger: CGACCCTGCTCCTGCCTCCCACATTAATGGCGGCAT...AAAGTGGACCACTTCTGTTATTCCCTGACATTCTCCCTGACAGTCCAGCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp TTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATGTCAGGGAATAACATGGGGTGTGGGTGCCTaGGACGAGGGAGTCAGAACG +
Preference number: 4 (lower is better)
Translates to: FPNIIMMLDCQGECQGITWGVGA*DEGVRT
Trigger: CGTTCTGACTCCCTCGTCCCAGGCACCCACACCCCA...TGTTATTCCCTGACATTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp TTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATGTCAGGGAATAACATGGGCCACACCCTGCTaGCCACTCTTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FPNIIMMLDCQGECQGITWATPC*PLFWAV
Trigger: CACAGCCCAGAAGAGTGGCCAGCAGGGTGTGGCCCA...TGTTATTCCCTGACATTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp CAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTTCATGGCCAGGGAGCTaGTGTATAATGAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: QDQGAAKGAGFNSPISHLSWPGS*CIMSCR
Trigger: ACGACAGCTCATTATACACCAGCTCCCTGGCCATGA...AAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp ACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCATCCTGCAGACCTTCATaGCCAGGGAGCTGGTGTATA +
Preference number: 4 (lower is better)
Translates to: TSKGPQTKCHVWSQYIWPSCRPS*PGSWCI
Trigger: TATACACCAGCTCCCTGGCCATGAAGGTCTGCAGGA...TGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCCTTTTGTTCATTGTGTaGGTGGTGGCTGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: TCEEEVCWRLHEGSACWALLFIV*VVAERR
Trigger: CCTCCTTTCAGCCACCACCCACACAATGAACAAAAG...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGAGAGCCCAGAACAGTTaGCAGGCACACCAACCCCTC +
Preference number: 4 (lower is better)
Translates to: KSQGQLRSVHSFLASTSKRAQNS*QAHQPL
Trigger: GAGGGGTTGGTGTGCCTGCCAACTGTTCTGGGCTCT...CTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR TCA 90 bp ACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCACCTTTCCAGGGCTGCTaGCGTGTGTTTGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: TSKGPQTKCHVWSQYIWPPFQGC*RVFELF
Trigger: GAAAAGTTCAAACACACGTCAGCAGCCCTGGAAAGG...TGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATTAGCTTTGTTGGAGCACCTCATATaGGCAGGGATCCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LEPVHLAKCRSPTRSLALLEHLI*AGIPGH
Trigger: ATGCCCAGGGATCCCTGCTCATATGAGGTGCTCCAA...CAAAGCTAATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp AAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGGGAGGTTCTTGACCGTTGGCCAGCGTTTTGTTaGGCTCGTCTATCATTCTGC +
Preference number: 4 (lower is better)
Translates to: KVQDSTVQSPIFREVLDRWPAFC*ARLSFC
Trigger: GCAGAATGATAGACGAGCTCAACAAAACGCTGGCCA...ACGGTCAAGAACCTCCCTGAAGATGGGAGATTGGACTGTTGAATCCTGCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp CTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGGATGACAGACACTTGTaGGGAAGAGGTTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLLGINFKGPPNQMSCLEDDRHL*GRGLLE
Trigger: CTCCAGCAAACCTCTTCCTCACAAGTGTCTGTCATC...CTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp AGTGAAACTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCAACACCGGCACTTGTTaGCCCCTTTCAACAGGACAC +
Preference number: 4 (lower is better)
Translates to: SETQTLQKVGFSPGHLCSNTGTC*PLSTGH
Trigger: GTGTCCTGTTGAAAGGGGTCAACAAGTGCCGGTGTT...GGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAGTTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGAGGTTTGGCCTCTGCTaGCTGGTTGCAAATTGGCAA +
Preference number: 4 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWRFGLC*LVANWQ
Trigger: TTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCT...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp GATGCTGGACTGTCAGGGAGAATGTCAGGGAATAACAGAAGTGGTCCACTTTGGACACACACCTGGCTTTaGAAGTTTCATCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: DAGLSGRMSGNNRSGPLWTHTWL*KFHLGQ
Trigger: CTGCCCCAGATGAAACTTTCAAAGCCAGGTGTGTGT...CCAAAGTGGACCACTTCTGTTATTCCCTGACATTCTCCCTGACAGTCCAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTCAAGTGTCGGGCTCTaGAAATACACATGCTACACA +
Preference number: 4 (lower is better)
Translates to: TCEEEVCWRLHEGSACWASSVGL*KYTCYT
Trigger: TGTGTAGCATGTGTATTTTCAGAGCCCGACACTTGA...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR GCA 90 bp TTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTCGTTTCAGTACAAAACAAAGCAGTaGGACGCTTCTGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LQKVGFSPGHLCSTSSFQYKTKQ*DASEPA
Trigger: TGCGGGCTCAGAAGCGTCGCACTGCTTTGTTTTGTA...CTGAAACGAGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp CTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATTAGCTTTGCAAACTTACTTCTCCTaGGGATGGGTGGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LEPVHLAKCRSPTRSLALQTYFS*GWVGCG
Trigger: CCCACACCCCACCCATCCGCAGGAGAAGTAAGTTTG...CAAAGCTAATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp CTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATTAGCTTTGGAGCTTTCCAGCCTCTaGATGGTCATGGCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: LEPVHLAKCRSPTRSLALELSSL*MVMASV
Trigger: AACGCTGGCCATGACCATGCAGAGGCTGGAAAGCTC...CAAAGCTAATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCTTGAACAGGGGACCCGCTaGTCAGAGCTTTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VFCSGLASADWLQIGNNLEQGTR*SELSSL
Trigger: GAGGCTGGAAAGCTCTGAGCAGCGGGTCCCCTGTTC...AAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp TGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATCTGTTCCAGTTCCTCTaGAGTTGGCCTCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: CHVWSQYIWPSVEVQPDHLFQFL*SWPLAQ
Trigger: CTGAGCCAGAGGCCAACTGCAGAGGAACTGGAACAG...ATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAGACATGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGTGAGGAAGAGGTTTaGTGGAGACTTCATGAAGGT +
Preference number: 4 (lower is better)
Translates to: TCEEEVCWRLHEGSACWACEEEV*WRLHEG
Trigger: ACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACA...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GAGCTTCCCACCGTCATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGGTGAAACTCAGACTTTaGAGAAAGTTGGTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: ELPTVIPTGVPLNTHLALVKLRL*RKLVLA
Trigger: GGCTAAAACCAACTTTCTGCAAAGTCTGAGTTTCAC...CAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATGACGGTGGGAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGAGGGGCTGCCAAAGGTaGAGGATTCAACAGTCCAAT +
Preference number: 4 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWRGCQR*RIQQSN
Trigger: ATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCT...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTAGGAGGGAGCCGGTGGTaGAGGGGAGGTGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLGGSRW*RGGAGR
Trigger: ACGGCCAGCACCTCCCCTCCACCACCGGCTCCCTCC...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTAAGCCCGAGGGGTGCATaGGGAGGGAGCCGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLSPRGA*GGSRWW
Trigger: CCACCACCGGCTCCCTCCCCATGCACCCCTCGGGCT...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCTTTCCAGCCTCTGCATaGTCATGGCCAGCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSFPASA*SWPAFC
Trigger: ACAAAACGCTGGCCATGACCATGCAGAGGCTGGAAA...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGGGAGGTTCTTGACCGTTTTCCAGCCTCTGCATaGTCATGGCCAGCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KVQDSTVQSPIFREVLDRFPASA*SWPAFC
Trigger: ACAAAACGCTGGCCATGACCATGCAGAGGCTGGAAA...ACGGTCAAGAACCTCCCTGAAGATGGGAGATTGGACTGTTGAATCCTGCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp AGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCTTTCCAGCCTCTGCATaGTCATGGCCAGCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: REKPGATEKCSLLLGINFFPASA*SWPAFC
Trigger: ACAAAACGCTGGCCATGACCATGCAGAGGCTGGAAA...GAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAATTTCCAGCCTCTGCATaGTCATGGCCAGCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LQRAPKPNVMSGASTFGQFPASA*SWPAFC
Trigger: ACAAAACGCTGGCCATGACCATGCAGAGGCTGGAAA...TTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATTAGCTTTGAGCTGTGGTAAGAAGTaGAACAGGGGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LEPVHLAKCRSPTRSLALSCGKK*NRGPAA
Trigger: AGCAGCGGGTCCCCTGTTCCACTTCTTACCACAGCT...CAAAGCTAATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGTCATGGCCAGGGAGCTaGTGTATAATGAGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: LLLGINFKGPPNQMSCLESWPGS*CIMSCR
Trigger: ACGACAGCTCATTATACACCAGCTCCCTGGCCATGA...CTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGATCCTGCAGACCTTCATaGCCAGGGAGCTGGTGTATA +
Preference number: 4 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGSCRPS*PGSWCI
Trigger: TATACACCAGCTCCCTGGCCATGAAGGTCTGCAGGA...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGCCTCATCCGTCTGCCTaGGAAGGATGTTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QRAPKPNVMSGASTFGQVPHPSA*EGCSFL
Trigger: AAGAAAAGAACATCCTTCCCAGGCAGACGGATGAGG...CACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCGGTTGGGATGCATTTTaGTGTCAGAAGTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGGWDAF*CQKWDQ
Trigger: CTGGTCCCACTTCTGACACCAAAATGCATCCCAACC...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCGAGGAAGAGGTTTGCTaGAGACTTCATGAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: TCEEEVCWRLHEGSACWAEEEVC*RLHEGS
Trigger: ACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTC...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAGACTCCCCCAGAAATaGGCCCTTCCCTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: REKPGATEKCSLLLGINFRLPQK*ALPFCS
Trigger: TGAACAAAAGGGAAGGGCCCATTTCTGGGGGAGTCT...GAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GTGAAACTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCATTTGAAAGTTTCATCTaGGGCAGCCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VKLRLCRKLVLARAICVPFESFI*GSPGGL
Trigger: GAGGCCACCAGGGCTGCCCCAGATGAAACTTTCAAA...TGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAGTTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp CAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCACATCCAAGAGTCTGTaGGCAGACTCTACATCCAGA +
Preference number: 4 (lower is better)
Translates to: QLQRAPKPNVMSGASTFGTSKSL*ADSTSR
Trigger: TCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGT...GCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR TCA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGACATCCAAGAGTCTGTaGGCAGACTCTACATCCAGA +
Preference number: 4 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWTSKSL*ADSTSR
Trigger: TCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGT...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCCTGCTGACGTGTGTTTaGACTTTTCGCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TCEEEVCWRLHEGSACWALLTCV*TFRFSS
Trigger: AGAAGAAAAGCGAAAAGTTCAAACACACGTCAGCAG...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CTCCATGCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAACCTTTCCAGGGCTGCTaGCGTGTGTTTGAACTTTTC +
Preference number: 4 (lower is better)
Translates to: LHASVFPNIIMMLDCQGEPFQGC*RVFELF
Trigger: GAAAAGTTCAAACACACGTCAGCAGCCCTGGAAAGG...TTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp AGTGAAACTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCCGGGCATACAGATCATaGCTTTCTTTGGAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: SETQTLQKVGFSPGHLCSRAYRS*LSLEVA
Trigger: CGCTACCTCCAAAGAAAGTCATGATCTGTATGCCCG...GGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAGTTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGACGGGCATACAGATCATaGCTTTCTTTGGAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGRAYRS*LSLEVA
Trigger: CGCTACCTCCAAAGAAAGTCATGATCTGTATGCCCG...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp AAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGAGTCTTCGTAGTCTaGCTCATGAGGCACATTTTC +
Preference number: 4 (lower is better)
Translates to: KTKGLPKVQDSTVQSPIFRVFVV*LMRHIF
Trigger: GAAAATGTGCCTCATGAGTCAGACTACGAAGACTCT...GAAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp GTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGACAGTTGATTATTTGAACTaGGCATATGACATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VCWRLHEGSACWAWLERTVDYLN*AYDIFP
Trigger: GGGAAAGATGTCATATGCTCAGTTCAAATAATCAAC...TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp AGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGGTTGATTATTTGAACTaGGCATATGACATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RKRFAGDFMKVVPAGPGWVDYLN*AYDIFP
Trigger: GGGAAAGATGTCATATGCTCAGTTCAAATAATCAAC...CCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTTCCCAAATATCATCATaGTGCTGGACTGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LRLCRKLVLARAICVPLPSQISS*CWTVRE
Trigger: CTCCCTGACAGTCCAGCATCATGATGATATTTGGGA...AGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp CAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTGCTGCAAATGTGTTTaGTCTCCTTGCCTAGTTGAC +
Preference number: 4 (lower is better)
Translates to: QRAPKPNVMSGASTFGQVCCKCV*SPCLVD
Trigger: GTCAACTAGGCAAGGAGATCAAACACATTTGCAGCA...CACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR GCA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGATACAAAACAAAGCAGTaGGACGCTTCTGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGYKTKQ*DASEPA
Trigger: TGCGGGCTCAGAAGCGTCGCACTGCTTTGTTTTGTA...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS-3UTR GCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTAGTGGTGGAGGGGAGGTaGTGGCCGTGGCTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLVVEGR*WPWLPY
Trigger: GTACGGCAGCCACGGCCAGCACCTCCCCTCCACCAC...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATGTCAGGGAATAACAGCTCGTCTATCATTCTaGAGCCCGAGGGGTGCATGG +
Preference number: 4 (lower is better)
Translates to: FPNIIMMLDCQGECQGITARLSF*SPRGAW
Trigger: CCATGCACCCCTCGGGCTGCAGAATGATAGACGAGC...TGTTATTCCCTGACATTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp AAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGTGCCGGGGGTTGGGATaGATTTTGGTGTCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: KSQGQLRSVHSFLASTSKCRGLG*ILVSEV
Trigger: CACTTCTGACACCAAAATGCATCCCAACCCCCGGCA...CTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCTTGGGATCCCTGGGCATTaGGACTGGCTCCATTTCGGA +
Preference number: 4 (lower is better)
Translates to: VFCSGLASADWLQIGNNLGIPGH*DWLHFG
Trigger: TCCGAAATGGAGCCAGTCCCAATGCCCAGGGATCCC...AAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp CTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAATGATGTCTGACGGTTaGAGCACCTCATATGAGCAG +
Preference number: 4 (lower is better)
Translates to: LQRAPKPNVMSGASTFGQMMSDG*STSYEQ
Trigger: CTGCTCATATGAGGTGCTCCAACCGTCAGACATCAT...TTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCATGATGTCTGACGGTTaGAGCACCTCATATGAGCAG +
Preference number: 4 (lower is better)
Translates to: REKPGATEKCSLLLGINFMMSDG*STSYEQ
Trigger: CTGCTCATATGAGGTGCTCCAACCGTCAGACATCAT...GAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGATTTCCAGCCTCTGCATaGTCATGGCCAGCGTTTTGT +
Preference number: 4 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGFPASA*SWPAFC
Trigger: ACAAAACGCTGGCCATGACCATGCAGAGGCTGGAAA...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCACACTTGTCTTATTTCTaGAAGGCCCATAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TSKGPQTKCHVWSQYIWPHLSYF*KAHRSC
Trigger: GCAGGACCTATGGGCCTTCCAGAAATAAGACAAGTG...TGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATCACTTGTCTTATTTCTaGAAGGCCCATAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHHLSYF*KAHRSC
Trigger: GCAGGACCTATGGGCCTTCCAGAAATAAGACAAGTG...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCTTCAATCACAACAGTTaGCACTTGTCTTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCFNHNS*HLSYFW
Trigger: CCAGAAATAAGACAAGTGCCAACTGTTGTGATTGAA...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GTCCAATCTCCCATCTTCAGGGAGGTTCTTGACCGTGAGAGGGAGGTGCGAGCTTTCAATCACAACAGTTaGCACTTGTCTTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: VQSPIFREVLDREREVRAFNHNS*HLSYFW
Trigger: CCAGAAATAAGACAAGTGCCAACTGTTGTGATTGAA...AGCTCGCACCTCCCTCTCACGGTCAAGAACCTCCCTGAAGATGGGAGATTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp CAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACATTCAATCACAACAGTTaGCACTTGTCTTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: QKWDQQLGPPSHHFCVFTFNHNS*HLSYFW
Trigger: CCAGAAATAAGACAAGTGCCAACTGTTGTGATTGAA...TGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGTTCAATCACAACAGTTaGCACTTGTCTTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: EEVCWRLHEGSACWAWLEFNHNS*HLSYFW
Trigger: CCAGAAATAAGACAAGTGCCAACTGTTGTGATTGAA...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTACCCTGCTGGTGCCCTTaGCACTGCCGGGGGTTGGGA +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLPCWCP*HCRGLG
Trigger: TCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGG...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GGAGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTACCAAATGTCATGTCTaGAGCCAGTACATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGKSQGQLRSVHSFLASTTKCHV*SQYIWP
Trigger: TGGCCAAATGTACTGGCTCCAGACATGACATTTGGT...AGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAAGACTCCCCCAGAAATaGGCCCTTCCCTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGRLPQK*ALPFCS
Trigger: TGAACAAAAGGGAAGGGCCCATTTCTGGGGGAGTCT...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TCAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTATTTTGTTCAGGTTTaGCCTCTGCTGACTGGTTGC +
Preference number: 4 (lower is better)
Translates to: SRPRGCQRCRIQQSNLPSYFVQV*PLLTGC
Trigger: GCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATA...AGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp TGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATATGCATCCGCCTCTCTaGGTCTGTTTCCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: CHVWSQYIWPSVEVQPDHMHPPL*VCFLAF
Trigger: GAAAGCCAGGAAACAGACCCAGAGAGGCGGATGCAT...ATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAGACATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR TCA 90 bp AGTGAAACTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCTCCATTTCCAAGGCTTaGAAATCCTTCCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SETQTLQKVGFSPGHLCSSISKA*KSFPGW
Trigger: CCAACCTGGGAAGGATTTTCAAGCCTTGGAAATGGA...GGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAGTTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp AAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGCGGGCATACAGATCATaGCTTTCTTTGGAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: KSQGQLRSVHSFLASTSKRAYRS*LSLEVA
Trigger: CGCTACCTCCAAAGAAAGTCATGATCTGTATGCCCG...CTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATAGAGTCTTCGTAGTCTaGCTCATGAGGCACATTTTC +
Preference number: 4 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHRVFVV*LMRHIF
Trigger: GAAAATGTGCCTCATGAGTCAGACTACGAAGACTCT...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAGAGTCTTCGTAGTCTaGCTCATGAGGCACATTTTC +
Preference number: 4 (lower is better)
Translates to: QLRSVHSFLASTSKGPQTRVFVV*LMRHIF
Trigger: GAAAATGTGCCTCATGAGTCAGACTACGAAGACTCT...GGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATTAGCTTTGGATGACAGACACTTGTaGGGAAGAGGTTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LEPVHLAKCRSPTRSLALDDRHL*GRGLLE
Trigger: CTCCAGCAAACCTCTTCCTCACAAGTGTCTGTCATC...CAAAGCTAATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCTTCTTTGGACTCAGATaGCAGACACTTGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSFFGLR*QTLVRK
Trigger: CTTCCTCACAAGTGTCTGTCATCTGAGTCCAAAGAA...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATAGTTGATTATTTGAACTaGGCATATGACATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SGTSSSDRRAITFAFSHIVDYLN*AYDIFP
Trigger: GGGAAAGATGTCATATGCTCAGTTCAAATAATCAAC...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATGTCCTGCGTTTTACTTaGCATTGGAGGCAACCGGTT +
Preference number: 4 (lower is better)
Translates to: CHVWSQYIWPSVEVQPDHVLRFT*HWRQPV
Trigger: AACCGGTTGCCTCCAATGTCAAGTAAAACGCAGGAC...ATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAGACATGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR GCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTAGGTGCTGGCCGTGGCTaGCGTACTGCAGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLGAGRG*RTAAGA
Trigger: AGCACCAGCTGCAGTACGGCAGCCACGGCCAGCACC...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp TTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATGTCAGGGAATAACAAAGGCCCATAGGTCCTaGTTTGGTGACCCCATCACC +
Preference number: 4 (lower is better)
Translates to: FPNIIMMLDCQGECQGITKAHRS*FGDPIT
Trigger: GGTGATGGGGTCACCAAAGCAGGACCTATGGGCCTT...TGTTATTCCCTGACATTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp ATGATGCTGGACTGTCAGGGAGAATGTCAGGGAATAACAGAAGTGGTCCACTTTTCAAGACCAAGGGGCTaGCAAAGGTGCAGGATTCAA +
Preference number: 4 (lower is better)
Translates to: MMLDCQGECQGITEVVHFSRPRG*QRCRIQ
Trigger: TTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGA...AAAGTGGACCACTTCTGTTATTCCCTGACATTCTCCCTGACAGTCCAGCATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTACATGCAGCCTCTCGGTaGCAGGCAGCCCCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLHAASR*QAAPSP
Trigger: AGGCGAAGGGGCTGCCTGGCACCGAGAGGCTGCATG...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CCA 90 bp CTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGAAATCCTTCCCAGGTTaGCAAACTTACTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLLGINFKGPPNQMSCLEKSFPG*QTYFSC
Trigger: GCAGGAGAAGTAAGTTTGCCAACCTGGGAAGGATTT...CTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGAATGTCAGGGAATAACAGAAGTGGTCCACTTTGGAAGTCCCGTGTGGATGTGATGATGTCTGACGGTTaGAGCACCTCATATGAGCAG +
Preference number: 4 (lower is better)
Translates to: RMSGNNRSGPLWKSRVDVMMSDG*STSYEQ
Trigger: CTGCTCATATGAGGTGCTCCAACCGTCAGACATCAT...CACATCCACACGGGACTTCCAAAGTGGACCACTTCTGTTATTCCCTGACATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp GTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCTTAGCTGTGGTAAGAAGTaGAACAGGGGACCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VFCSGLASADWLQIGNNLSCGKK*NRGPAA
Trigger: AGCAGCGGGTCCCCTGTTCCACTTCTTACCACAGCT...AAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp CTCCATGCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAACCTCATCCGTCTGCCTaGGAAGGATGTTCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LHASVFPNIIMMLDCQGEPHPSA*EGCSFL
Trigger: AAGAAAAGAACATCCTTCCCAGGCAGACGGATGAGG...TTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp AAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGTTGGGATGCATTTTaGTGTCAGAAGTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: KSQGQLRSVHSFLASTSKGWDAF*CQKWDQ
Trigger: CTGGTCCCACTTCTGACACCAAAATGCATCCCAACC...CTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp ACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAGAGGAAGAGGTTTGCTaGAGACTTCATGAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: TSKGPQTKCHVWSQYIWPEEEVC*RLHEGS
Trigger: ACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTC...TGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTCCCTTCAGCTTTCTTTaGACTCAGATGACAGACACT +
Preference number: 4 (lower is better)
Translates to: KGPPNQMSCLEPVHLAKCPFSFL*TQMTDT
Trigger: AGTGTCTGTCATCTGAGTCCAAAGAAAGCTGAAGGG...ACACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCAAGACTCCCCCAGAAATaGGCCCTTCCCTTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: KCSLLLGINFKGPPNQMSRLPQK*ALPFCS
Trigger: TGAACAAAAGGGAAGGGCCCATTTCTGGGGGAGTCT...TGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CTCCATGCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATTCAGTAACCTAAAGTaGAACCGCATGCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LHASVFPNIIMMLDCQGEFSNLK*NRMPAF
Trigger: GAAGGCAGGCATGCGGTTCCACTTTAGGTTACTGAA...TTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGCATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp TTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTCGTTTCAGAGTCCCGTGTGGATGTaGTATTTTGTTCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LQKVGFSPGHLCSTSSFQSPVWM*YFVQVW
Trigger: CCAAACCTGAACAAAATACCACATCCACACGGGACT...CTGAAACGAGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGCCAAACACAGAGTTTTaGGAGAAAACACTGGAACAC +
Preference number: 4 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWPNTEF*EKTLEH
Trigger: GTGTTCCAGTGTTTTCTCTCAAAACTCTGTGTTTGG...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp GTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCTTCCCATCCATGATGTCTaGCGGTTGGAGCACCTCATA +
Preference number: 4 (lower is better)
Translates to: VFCSGLASADWLQIGNNLPIHDV*RLEHLI
Trigger: TATGAGGTGCTCCAACCGTCAGACATCATGGATGGG...AAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp GATGCTGGACTGTCAGGGAGAATGTCAGGGAATAACAGAAGTGGTCCACTTTGGCCCAATCTGTGTCTCTaGGTCTCTAGACTAAATACT +
Preference number: 4 (lower is better)
Translates to: DAGLSGRMSGNNRSGPLWPNLCL*VSRLNT
Trigger: AGTATTTAGTCTAGAGACTCAGAGACACAGATTGGG...CCAAAGTGGACCACTTCTGTTATTCCCTGACATTCTCCCTGACAGTCCAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR GCA 90 bp CTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTCCTCTGCTGACTGGTTaGAAATTGGCAACAATCTTT +
Preference number: 4 (lower is better)
Translates to: LRLCRKLVLARAICVPLPPLLTG*KLATIF
Trigger: AAAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGG...AGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAAAATCCTTCCCAGGTTaGCAAACTTACTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGKSFPG*QTYFSC
Trigger: GCAGGAGAAGTAAGTTTGCCAACCTGGGAAGGATTT...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTATGGGCCACACCCTGCTaGCCACTCTTCTGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLWATPC*PLFWAV
Trigger: CACAGCCCAGAAGAGTGGCCAGCAGGGTGTGGCCCA...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTACTGCCGTACTGCAGCTaGTGCTGGATCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLLPYCS*CWIWEG
Trigger: GCCCTCCCAGATCCAGCACCAGCTGCAGTACGGCAG...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTTCATTGTGTGGGTaGTGGCTGAAAGGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: KCSLLLGINFKGPPNQMSCSLCG*WLKGGK
Trigger: TTTCCCTCCTTTCAGCCACCACCCACACAATGAACA...TGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CTCCATGCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATTGGCCTCTGCTGACTaGTTGCAAATTGGCAACAAT +
Preference number: 4 (lower is better)
Translates to: LHASVFPNIIMMLDCQGELASAD*LQIGNN
Trigger: ATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAA...TTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp CTCCATGCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAAGAAGAATCTTTGAGCTaGCTCAACATCCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LHASVFPNIIMMLDCQGEEESLS*LNIQES
Trigger: AGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTC...TTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGCATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp AGAATGTCAGGGAATAACAGAAGTGGTCCACTTTGGAAGTCCCGTGTGGATGTGCTGCTGACGTGTGTTTaGACTTTTCGCTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RMSGNNRSGPLWKSRVDVLLTCV*TFRFSS
Trigger: AGAAGAAAAGCGAAAAGTTCAAACACACGTCAGCAG...CACATCCACACGGGACTTCCAAAGTGGACCACTTCTGTTATTCCCTGACATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp AAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGAGAGTCTTCGTAGTCTaGCTCATGAGGCACATTTTC +
Preference number: 4 (lower is better)
Translates to: KSQGQLRSVHSFLASTSKRVFVV*LMRHIF
Trigger: GAAAATGTGCCTCATGAGTCAGACTACGAAGACTCT...CTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTACTTTGTCTGCAGCGGTaGGGCGGGTCCACGGCTTAT +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLLCLQR*GGSTAY
Trigger: ATAAGCCGTGGACCCGCCTCACCGCTGCAGACAAAG...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTTTGAACTGAGCATATaGCATCTTTCCCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: QRAPKPNVMSGASTFGQVFELSI*HLSPSK
Trigger: TTTAGAAGGGGAAAGATGTCATATGCTCAGTTCAAA...CACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp AGTTCAGAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTGGTGCCAATCTGTTaGCTCAGCTCCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: SSEDLHRNGEVNKYQHLWLVPIC*LSSSRS
Trigger: GGAGCGGCTGGAGCTGAGGCAACAGATTGGCACCAA...CCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTCTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTATGGTGCCCTTGGCACTaGCGGGGGTTGGGATGCATT +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLWCPWH*RGLGCI
Trigger: AATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCA...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTAGCAGAGACAGCTGGCTaGAGCTCAGGGACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLAETAG*SSGTAH
Trigger: ATGGGCAGTCCCTGAGCTCCAGCCAGCTGTCTCTGC...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TGGTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCCACTTGTCTTATTTCTaGAAGGCCCATAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: WYFVQVWPLLTGCKLATIHLSYF*KAHRSC
Trigger: GCAGGACCTATGGGCCTTCCAGAAATAAGACAAGTG...GATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTACAGTTCCTCTGCAGTTaGCCTCTGGCTCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLQFLCS*PLAQPP
Trigger: AGGCGGCTGAGCCAGAGGCCAACTGCAGAGGAACTG...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGTTCAGAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGGGCACTGCCGGGGGTTaGGATGCATTTTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: SSEDLHRNGEVNKYQHLWGTAGG*DAFWCQ
Trigger: CTGACACCAAAATGCATCCCAACCCCCGGCAGTGCC...CCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTCTGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp CTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATTAGCTTTGCCCTTCAGCTTTCTTTaGACTCAGATGACAGACACT +
Preference number: 4 (lower is better)
Translates to: LEPVHLAKCRSPTRSLALPFSFL*TQMTDT
Trigger: AGTGTCTGTCATCTGAGTCCAAAGAAAGCTGAAGGG...CAAAGCTAATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCAACCAAATGTCATGTCTaGAGCCAGTACATTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KCSLLLGINFKGPPNQMSTKCHV*SQYIWP
Trigger: TGGCCAAATGTACTGGCTCCAGACATGACATTTGGT...TGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp AGAATGTCAGGGAATAACAGAAGTGGTCCACTTTGGAAGTCCCGTGTGGATGTGTTTGGAAGTCCCGTGTaGATGTGGTATTTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RMSGNNRSGPLWKSRVDVFGSPV*MWYFVQ
Trigger: CTGAACAAAATACCACATCCACACGGGACTTCCAAA...CACATCCACACGGGACTTCCAAAGTGGACCACTTCTGTTATTCCCTGACATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CCA 90 bp GTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCTTAGAAGTGGTCCACTTTaGAAGTCCCGTGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: VFCSGLASADWLQIGNNLRSGPL*KSRVDV
Trigger: CACATCCACACGGGACTTCCAAAGTGGACCACTTCT...AAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp AAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGCCAAACACAGAGTTTTaGGAGAAAACACTGGAACAC +
Preference number: 4 (lower is better)
Translates to: KSQGQLRSVHSFLASTSKPNTEF*EKTLEH
Trigger: GTGTTCCAGTGTTTTCTCTCAAAACTCTGTGTTTGG...CTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR TCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTATCCACCGTGGGCCTTTaGCTGAGCTTTCGGGTTAGC +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLSTVGL*LSFRVS
Trigger: GCTAACCCGAAAGCTCAGTCAAAGGCCCACGGTGGA...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCGTTGGGTTGATTATTTaGACTGAGCATATGACATCT +
Preference number: 4 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSVGLII*TEHMTS
Trigger: AGATGTCATATGCTCAGTTCAAATAATCAACCCAAC...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCGTTGGGTTGATTATTTaGACTGAGCATATGACATCT +
Preference number: 4 (lower is better)
Translates to: QLRSVHSFLASTSKGPQTVGLII*TEHMTS
Trigger: AGATGTCATATGCTCAGTTCAAATAATCAACCCAAC...GGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp CTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGGTTGGGTTGATTATTTaGACTGAGCATATGACATCT +
Preference number: 4 (lower is better)
Translates to: LLLGINFKGPPNQMSCLEVGLII*TEHMTS
Trigger: AGATGTCATATGCTCAGTTCAAATAATCAACCCAAC...CTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTAAGCGCACTCTCCGGATaGGCCGCCGGTCTATATCAT +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLSALSG*AAGLYH
Trigger: ATGATATAGACCGGCGGCCCATCCGGAGAGTGCGCT...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR CCA 90 bp AAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTTTCAATCACAACAGTTaGCACTTGTCTTATTTCTGG +
Preference number: 4 (lower is better)
Translates to: KGPPNQMSCLEPVHLAKCFNHNS*HLSYFW
Trigger: CCAGAAATAAGACAAGTGCCAACTGTTGTGATTGAA...ACACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCTTAAATCCTTCCCAGGTTaGCAAACTTACTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VFCSGLASADWLQIGNNLKSFPG*QTYFSC
Trigger: GCAGGAGAAGTAAGTTTGCCAACCTGGGAAGGATTT...AAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR TCA 90 bp AGTTCAGAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGCGGGCATACAGATCATaGCTTTCTTTGGAGGTAGCG +
Preference number: 4 (lower is better)
Translates to: SSEDLHRNGEVNKYQHLWRAYRS*LSLEVA
Trigger: CGCTACCTCCAAAGAAAGTCATGATCTGTATGCCCG...CCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTCTGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp AAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATTTGAACTGAGCATATaGCATCTTTCCCCTTCTAAA +
Preference number: 4 (lower is better)
Translates to: KCSLLLGINFKGPPNQMSFELSI*HLSPSK
Trigger: TTTAGAAGGGGAAAGATGTCATATGCTCAGTTCAAA...TGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp AAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGTTGATTATTTGAACTaGGCATATGACATCTTTCCC +
Preference number: 4 (lower is better)
Translates to: KSQGQLRSVHSFLASTSKVDYLN*AYDIFP
Trigger: GGGAAAGATGTCATATGCTCAGTTCAAATAATCAAC...CTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR GCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTAAAGGACCGTTCCACCTaGCAGACAGTCTTCAGTCAG +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLKDRST*QTVFSQ
Trigger: CTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTT...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp TTCAGCTTTCTTTGGACTCAGATGACAGACACTTGTGAGGAAGAGGTTTGCTGGCTTTATCAGATAAAATaGCCAGAGCACGTTACCTTA +
Preference number: 4 (lower is better)
Translates to: FSFLWTQMTDTCEEEVCWLYQIK*PEHVTL
Trigger: TAAGGTAACGTGCTCTGGCCATTTTATCTGATAAAG...CCAGCAAACCTCTTCCTCACAAGTGTCTGTCATCTGAGTCCAAAGAAAGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS-3UTR CCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTAGGTTGGGATGCATTTTaGTGTCAGAAGTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLGWDAF*CQKWDQ
Trigger: CTGGTCCCACTTCTGACACCAAAATGCATCCCAACC...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR TCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTATCCATTTCCAAGGCTTaGAAATCCTTCCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLSISKA*KSFPGW
Trigger: CCAACCTGGGAAGGATTTTCAAGCCTTGGAAATGGA...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTATGTTCATTGTGTGGGTaGTGGCTGAAAGGAGGGAAA +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLCSLCG*WLKGGK
Trigger: TTTCCCTCCTTTCAGCCACCACCCACACAATGAACA...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CCA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTAAAAAAGCTTTCTTTTTaGGTTTCTCGGCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLKKLSF*VSRRSR
Trigger: GCGCGAGCGCCGAGAAACCCAAAAAGAAAGCTTTTT...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS TCA 90 bp GCGGCTGAGGCCTGGCTGCAGGTCTCCCTACACGCTCCCCAGCGGTaGGCCCAGCGAGACCCAGCAGACGGTCCTGCCTCCCACTCTCCA +
Preference number: 5 (lower is better)
Translates to: AAEAWLQVSLHAPQR*AQRDPADGPASHSP
Trigger: TGGAGAGTGGGAGGCAGGACCGTCTGCTGGGTCTCGCTGGGCTCACCGCTGGGGAGCGTGTAGGGAGACCTGCAGCCAGGCCTCAGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS TCA 90 bp CCGAAGCCGGAGGAGGGGGTAGGCAGGGCGCTCCTGGGTCCTACCTaGGAAGCTCCACTCCCACCTCTCTCGGGGTCTCACGTGCACATC +
Preference number: 5 (lower is better)
Translates to: PKPEEGVGRALLGPT*EAPLPPLSGSHVHI
Trigger: GATGTGCACGTGAGACCCCGAGAGAGGTGGGAGTGGAGCTTCTCAGGTAGGACCCAGGAGCGCCCTGCCTACCCCCTCCTCCGGCTTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS CCA 90 bp TGCCAGGCAGCCCCTTCGCCTTCCTTCCCGGCCGTGCCAATTCCCTaGCCGCTGACCAGCTCCCACGTGGGATGGAATGGAGAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: CQAAPSPSFPAVPIP*PLTSSHVGWNGEGE
Trigger: CTCCCCTTCTCCATTCCATCCCACGTGGGAGCTGGTCAGCGGCCAGGGAATTGGCACGGCCGGGAAGGAAGGCGAAGGGGCTGCCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS TCA 90 bp CAGCCCCTTCGCCTTCCTTCCCGGCCGTGCCAATTCCCTGGCCGCTaGCCAGCTCCCACGTGGGATGGAATGGAGAAGGGGAGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: QPLRLPSRPCQFPGR*PAPTWDGMEKGRVS
Trigger: TGACACCCTCCCCTTCTCCATTCCATCCCACGTGGGAGCTGGTCAGCGGCCAGGGAATTGGCACGGCCGGGAAGGAAGGCGAAGGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS CCA 90 bp CTGCCGTACTGCAGCTGGTGCTGGATCTGGGAGGGCAGGACAGTGTaGTGGTGCTGGGCCACACCCTGCTGGCCACTCTTCTGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LPYCSWCWIWEGRTV*WCWATPCWPLFWAV
Trigger: CACAGCCCAGAAGAGTGGCCAGCAGGGTGTGGCCCAGCACCACCACACTGTCCTGCCCTCCCAGATCCAGCACCAGCTGCAGTACGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS GCA 90 bp ACACGCTCCCCAGCGGTGAGCCCAGCGAGACCCAGCAGACGGTCCTaGCTCCCACTCTCCAGCACTCCCCTCTGCTTACTTTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: TRSPAVSPARPSRRS*LPLSSTPLCLLCLQ
Trigger: CTGCAGACAAAGTAAGCAGAGGGGAGTGCTGGAGAGTGGGAGGCAGGACCGTCTGCTGGGTCTCGCTGGGCTCACCGCTGGGGAGCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS CCA 90 bp TGGGCCGCCGGTCTATATCATCCTCCGAGGATGCCGCCATTAATGTaGGAGGCAGGAGCAGGGTCGCCCGGCGAGCTGAGAGGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: WAAGLYHPPRMPPLM*EAGAGSPGELRGRR
Trigger: CCTTCTCCCTCTCAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406205.7
CDS GCA 90 bp CTCCACTTCCTCAGCTGCCCCCAGGTTAAAGGAGATCCTGGCCTCTaGGAGGTACGGCGTGTCGCTCTTGGAGCGCACTCTCCGGATGGG +
Preference number: 5 (lower is better)
Translates to: LHFLSCPQVKGDPGL*EVRRVALGAHSPDG
Trigger: CCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGCTGAGGAAGTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000406205.7
ENST00000674595.1
ENST00000674637.1
ENST00000676159.1
CDS GCA 90 bp GTTGGCCTCTGGCTCAGCCGCCTGGTGAGCTTGGTGCCAATCTGTTaGCTCAGCTCCAGCCGCTCCTCATCCGTCTGCCTGGGAAGGATG +
Preference number: 5 (lower is better)
Translates to: VGLWLSRLVSLVPIC*LSSSRSSSVCLGRM
Trigger: CATCCTTCCCAGGCAGACGGATGAGGAGCGGCTGGAGCTGAGGCAACAGATTGGCACCAAGCTCACCAGGCGGCTGAGCCAGAGGCCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS GCA 90 bp CAGAGGGTTCATTATGTGCTCAGAGGTGCACAGGGCCTCACTGGCTaGTGGACAGAACAGGGGCTGCTCCCAGGACCAGGCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: QRVHYVLRGAQGLTG*WTEQGLLPGPGRVG
Trigger: CCCCACCCTGCCTGGTCCTGGGAGCAGCCCCTGTTCTGTCCAGCAGCCAGTGAGGCCCTGTGCACCTCTGAGCACATAATGAACCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 90 bp TGGGCCGCCGGTCTATATCATCCTCCGAGGATGCCGCCATTAATGTaGGAGGCAGGAGCAGGGTCGCCCGGCGAGCTTGAGCTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: WAAGLYHPPRMPPLM*EAGAGSPGELELLD
Trigger: GTCAAGGAGCTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332995.12
ENST00000379348.3
ENST00000379350.5
ENST00000674595.1
ENST00000674637.1
ENST00000676159.1
CDS CCA 90 bp CCGGCCGTGCCAATTCCCTGGCCGCTGACCAGCTCCCACGTGGGATaGAATGGAGAAGGGGAGGGTGTCAACCAAAGTCGGGGGATGGAT +
Preference number: 5 (lower is better)
Translates to: PAVPIPWPLTSSHVG*NGEGEGVNQSRGMD
Trigger: ATCCATCCCCCGACTTTGGTTGACACCCTCCCCTTCTCCATTCCATCCCACGTGGGAGCTGGTCAGCGGCCAGGGAATTGGCACGGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTCACCCTCCCCGGCACTaGTTGACCCCTTTCAACAGG +
Preference number: 5 (lower is better)
Translates to: VRALLVPLALPGVGMHFGHPPRH*LTPFNR
Trigger: CCTGTTGAAAGGGGTCAACAAGTGCCGGGGAGGGTG...ACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS GCA 90 bp GGTCCTGCCTCCCACTCTCCAGCACTCCCCTCTGCTTACTTTGTCTaGAGCGGTGAGGCGGGTCCACGGCTTATCTGCCCTGCGGTCATA +
Preference number: 5 (lower is better)
Translates to: GPASHSPALPSAYFV*SGEAGPRLICPAVI
Trigger: TATGACCGCAGGGCAGATAAGCCGTGGACCCGCCTCACCGCTGCAGACAAAGTAAGCAGAGGGGAGTGCTGGAGAGTGGGAGGCAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS GCA 90 bp GGCTCTGAAAATACACATGCTACACACGCCCATGCAGCCTCTCGGTaGCAGGCAGCCCCTTCGCCTTCCTTCCCGGCCGTGCCAATTCCC +
Preference number: 5 (lower is better)
Translates to: GSENTHATHAHAASR*QAAPSPSFPAVPIP
Trigger: GGGAATTGGCACGGCCGGGAAGGAAGGCGAAGGGGCTGCCTGGCACCGAGAGGCTGCATGGGCGTGTGTAGCATGTGTATTTTCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS CCA 90 bp CCTCTGCGAGGTACGGCGTGTCGCTCTTGGAGCGCACTCTCCGGATaGGCCGCCGGTCTATATCATCCTCCGAGGATGCCGCCATTAATG +
Preference number: 5 (lower is better)
Translates to: PLRGTACRSWSALSG*AAGLYHPPRMPPLM
Trigger: CATTAATGGCGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332995.12
ENST00000379348.3
ENST00000379350.5
ENST00000406205.7
ENST00000674595.1
ENST00000674637.1
ENST00000676159.1
CDS CCA 90 bp GTTGGCAAACTTACTTCTCCTGCGGATGGGTGGGGTGTGGGTGCCTaGGACGAGGGAGTCAGAACGCATCGCCGCCAGCCTCTCCACTTC +
Preference number: 5 (lower is better)
Translates to: VGKLTSPADGWGVGA*DEGVRTHRRQPLHF
Trigger: GAAGTGGAGAGGCTGGCGGCGATGCGTTCTGACTCCCTCGTCCCAGGCACCCACACCCCACCCATCCGCAGGAGAAGTAAGTTTGCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000406205.7
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CCA 90 bp GCCTCCACGATGGTCTCTCCAGCCTCACTCAGAGCCCAGAACAGTTaGCAGGCACACCAACCCCTCCTGGGTGTGACCTGCGGGTACTCA +
Preference number: 5 (lower is better)
Translates to: ASTMVSPASLRAQNS*QAHQPLLGVTCGYS
Trigger: TGAGTACCCGCAGGTCACACCCAGGAGGGGTTGGTGTGCCTGCCAACTGTTCTGGGCTCTGAGTGAGGCTGGAGAGACCATCGTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482982.2
ENST00000676234.1
CDS-3UTR CAA 90 bp CCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGTACGGCGTGTCGCTCTaGGAGCGCACTCTCCGGATG +
Preference number: 5 (lower is better)
Translates to: PGWRGQGPFHLPDSLQSGYGVSL*ERTLRM
Trigger: CATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTA...CCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR CAA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTTGGCACTGCCGGGGGTaGGGATGCATTTTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCWHCRG*GCILVS
Trigger: TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCA...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACGGCGCCGAAAGGGTCTaGACCTCGCCGACCTCGCTG +
Preference number: 5 (lower is better)
Translates to: SEVGPAARTAEPSLLRFHGAERV*TSPTSL
Trigger: CAGCGAGGTCGGCGAGGTCAAGACCCTTTCGGCGCC...GTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS TCA 90 bp TCAGAGCCCAGAACAGTTGGCAGGCACACCAACCCCTCCTGGGTGTaGCCTGCGGGTACTCAGACGTCTCTAAAGTGGCAGCCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SEPRTVGRHTNPSWV*PAGTQTSLKWQPPA
Trigger: GGCTGGAGGCTGCCACTTTAGAGACGTCTGAGTACCCGCAGGTCACACCCAGGAGGGGTTGGTGTGCCTGCCAACTGTTCTGGGCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482982.2
ENST00000676234.1
CDS GCA 90 bp AAAAAGGGAAACGCCTGCCCCCAGGTTAAAGGAGATCCTGGCCTCTaGGAGGTACGGCGTGTCGCTCTTGGAGCGCACTCTCCGGATGGG +
Preference number: 5 (lower is better)
Translates to: KKGNACPQVKGDPGL*EVRRVALGAHSPDG
Trigger: CCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGCGTTTCCCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS-3UTR CAA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCCCCATAGGTCCTGCTTaGGTGACCCCATCACCCGAG +
Preference number: 5 (lower is better)
Translates to: CRGLGCILVSEVGPAARTPIGPA*VTPSPE
Trigger: CTCGGGTGATGGGGTCACCAAAGCAGGACCTATGGG...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCCCCATAGGTCCTGCTTaGGTGACCCCATCACCCGAG +
Preference number: 5 (lower is better)
Translates to: WRGQGPFHLPDSLQSGPCPIGPA*VTPSPE
Trigger: CTCGGGTGATGGGGTCACCAAAGCAGGACCTATGGG...GCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCGCTTGGAGGGCCTGTaGCTGAGTTTGATGGCTAAG +
Preference number: 5 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCRLEGL*LSLMAK
Trigger: CTTAGCCATCAAACTCAGCAACAGGCCCTCCAAGCG...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCACGCTTGGAGGGCCTGTaGCTGAGTTTGATGGCTAAG +
Preference number: 5 (lower is better)
Translates to: GPCWCPWHCRGLGCILVSRLEGL*LSLMAK
Trigger: CTTAGCCATCAAACTCAGCAACAGGCCCTCCAAGCG...TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GCTGGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCTTCCAGCTCTCGCTaGGAGGGCCTGTTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: AGPGWRGQGPFHLPDSLQSSSSR*EGLLLS
Trigger: ACTCAGCAACAGGCCCTCCAAGCGAGAGCTGGAAGA...CTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCTTGGTGCCAATCTGTaGCCTCAGCTCCAGCCGCTC +
Preference number: 5 (lower is better)
Translates to: RTRTVPPARQSSVRALLVLGANL*PQLQPL
Trigger: GAGCGGCTGGAGCTGAGGCAACAGATTGGCACCAAG...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCCTTGGTGCCAATCTGTaGCCTCAGCTCCAGCCGCTC +
Preference number: 5 (lower is better)
Translates to: WRGQGPFHLPDSLQSGPCLGANL*PQLQPL
Trigger: GAGCGGCTGGAGCTGAGGCAACAGATTGGCACCAAG...GCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTTTCGGATGGCAGCTTaGTCTGCAGCGGTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: WRGQGPFHLPDSLQSGPCFRMAA*SAAVRR
Trigger: CCGCCTCACCGCTGCAGACAAAGCTGCCATCCGAAA...GCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGTTTCGGATGGCAGCTTaGTCTGCAGCGGTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: AWLERTRTVPPARQSSVRFRMAA*SAAVRR
Trigger: CCGCCTCACCGCTGCAGACAAAGCTGCCATCCGAAA...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCCAGAGCCCAGAACAGTaGGCAGGCACACCAACCCCT +
Preference number: 5 (lower is better)
Translates to: WRGQGPFHLPDSLQSGPCQSPEQ*AGTPTP
Trigger: AGGGGTTGGTGTGCCTGCCAACTGTTCTGGGCTCTG...GCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS CCA 90 bp TTCACAGGGGCGCCAGGATCTGGCCCATCCATGATGTCTGACGGTTaGAGCACCTCATATGAGCAGGGATCCCTGGGCATTGGGACTGGC +
Preference number: 5 (lower is better)
Translates to: FTGAPGSGPSMMSDG*STSYEQGSLGIGTG
Trigger: GCCAGTCCCAATGCCCAGGGATCCCTGCTCATATGAGGTGCTCCAACCGTCAGACATCATGGATGGGCCAGATCCTGGCGCCCCTGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000676159.1
ENST00000676234.1
CDS CCA 90 bp GGATCCAAACCAGACCCCCGACCTGCCTCGGCCGTCCCCAATCTCTaGGAGTCTTCTGACTCAGCAAGCCTGTACAGCTGTTTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GSKPDPRPASAVPNL*ESSDSASLYSCFSL
Trigger: CAGGCTGAAACAGCTGTACAGGCTTGCTGAGTCAGAAGACTCCCAGAGATTGGGGACGGCCGAGGCAGGTCGGGGGTCTGGTTTGGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS CCA 90 bp CGTGCCAATTCCCTGGCCGCTGACCAGCTCCCACGTGGGATGGAATaGAGAAGGGGAGGGTGTCAACCAAAGTCGGGGGATGGATTCAAC +
Preference number: 5 (lower is better)
Translates to: RANSLAADQLPRGME*RRGGCQPKSGDGFN
Trigger: GTTGAATCCATCCCCCGACTTTGGTTGACACCCTCCCCTTCTCCATTCCATCCCACGTGGGAGCTGGTCAGCGGCCAGGGAATTGGCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CAA 90 bp GCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGTGGCACTGCCGGGGGTaGGGATGCATTTTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: AGALGTAGGWDAFWCQKWWHCRG*GCILVS
Trigger: TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCA...CCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGGACACGTTGTTGTTGTaGTTGGGGGCGGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HCRGLGCILVSEVGPAARDTLLL*LGAGSF
Trigger: GAAGGAGCCCGCCCCCAACAACAACAACAACGTGTC...CCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR CAA 90 bp GCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTAAGGACACGTTGTTGTaGTTGTTGGGGGCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: AGEDKDRSTCQTVFSQGPKDTLL*LLGAGS
Trigger: GGAGCCCGCCCCCAACAACAACAACAACGTGTCCTT...AGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS-3UTR CAA 90 bp GAGCTTCCCACCGTCATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGCCCATAGGTCCTGCTTaGGTGACCCCATCACCCGAG +
Preference number: 5 (lower is better)
Translates to: ELPTVIPTGVPLNTHLALPIGPA*VTPSPE
Trigger: CTCGGGTGATGGGGTCACCAAAGCAGGACCTATGGG...CAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATGACGGTGGGAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGCCCATAGGTCCTGCTTaGGTGACCCCATCACCCGAG +
Preference number: 5 (lower is better)
Translates to: EEVCWRLHEGSACWAWLEPIGPA*VTPSPE
Trigger: CTCGGGTGATGGGGTCACCAAAGCAGGACCTATGGG...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCCCCATAGGTCCTGCTTaGGTGACCCCATCACCCGAG +
Preference number: 5 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCPIGPA*VTPSPE
Trigger: CTCGGGTGATGGGGTCACCAAAGCAGGACCTATGGG...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCGGCCTGTTGCTGAGTTaGATGGCTAAGGAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GQGPFHLPDSLQSGPCWCGLLLS*MAKESF
Trigger: GAAGGACTCCTTAGCCATCAAACTCAGCAACAGGCC...GCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACCTTGGTGCCAATCTGTaGCCTCAGCTCCAGCCGCTC +
Preference number: 5 (lower is better)
Translates to: SEVGPAARTAEPSLLRFHLGANL*PQLQPL
Trigger: GAGCGGCTGGAGCTGAGGCAACAGATTGGCACCAAG...GTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGTTTCGGATGGCAGCTTaGTCTGCAGCGGTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: EEVCWRLHEGSACWAWLEFRMAA*SAAVRR
Trigger: CCGCCTCACCGCTGCAGACAAAGCTGCCATCCGAAA...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCACCCCTTCAGCTTTCTTaGGACTCAGATGACAGACAC +
Preference number: 5 (lower is better)
Translates to: GPCWCPWHCRGLGCILVSPLQLS*DSDDRH
Trigger: GTGTCTGTCATCTGAGTCCAAAGAAAGCTGAAGGGG...TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCTGGAGCCAGTACATTaGGCCAAGTGTAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCLEPVH*AKCRSP
Trigger: TGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGCTGCCCAAAGCTCTTaGCTCCCACATGCATCCGCC +
Preference number: 5 (lower is better)
Translates to: EEEVCWRLHEGSACWAWLAAQSS*LPHASA
Trigger: GGCGGATGCATGTGGGAGCAAAGAGCTTTGGGCAGC...CAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CAA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCACAAAGGACACGTTGTaGTTGTTGTTGGGGGCGGGC +
Preference number: 5 (lower is better)
Translates to: CRGLGCILVSEVGPAARTTKDTL*LLLGAG
Trigger: GCCCGCCCCCAACAACAACAACAACGTGTCCTTTGT...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS TCA 90 bp TTTGTGTGGGGCCGGCTCTCCTCCTCATTACTAGCCTCAGACTTCTaGTCCTACAGGTCCCTTCAGAGCCGTGAAGGCGGGCATCCTGTG +
Preference number: 5 (lower is better)
Translates to: FVWGRLSSSLLASDF*SYRSLQSREGGHPV
Trigger: CACAGGATGCCCGCCTTCACGGCTCTGAAGGGACCTGTAGGATCAGAAGTCTGAGGCTAGTAATGAGGAGGAGAGCCGGCCCCACACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 90 bp GAGGGACTCTCTTCAGACACTGGCCCATCCATGATGTCTGACGGTTaGAGCACCTCATATGAGCAGGGATCCCTGGGCATTGGGACTGGC +
Preference number: 5 (lower is better)
Translates to: EGLSSDTGPSMMSDG*STSYEQGSLGIGTG
Trigger: GCCAGTCCCAATGCCCAGGGATCCCTGCTCATATGAGGTGCTCCAACCGTCAGACATCATGGATGGGCCAGTGTCTGAAGAGAGTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406205.7
ENST00000434977.1
ENST00000675203.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTAGGGAGTCCTCTTCATaGGATATAGAGAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: VRALLVPLALPGVGMHFGRESSS*DIESSP
Trigger: TGGGGAACTCTCTATATCCAATGAAGAGGACTCCCT...ACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTCACAACAGTTGGCACTaGTCTTATTTCTGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: VRALLVPLALPGVGMHFGHNSWH*SYFWKA
Trigger: GGCCTTCCAGAAATAAGACAAGTGCCAACTGTTGTG...ACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCACAACAGTTGGCACTaGTCTTATTTCTGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCHNSWH*SYFWKA
Trigger: GGCCTTCCAGAAATAAGACAAGTGCCAACTGTTGTG...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGGCCTGTTGCTGAGTTaGATGGCTAAGGAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: CRGLGCILVSEVGPAARTGLLLS*MAKESF
Trigger: GAAGGACTCCTTAGCCATCAAACTCAGCAACAGGCC...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCTCTTCCAGCTCTCGCTaGGAGGGCCTGTTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCSSSSR*EGLLLS
Trigger: ACTCAGCAACAGGCCCTCCAAGCGAGAGCTGGAAGA...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AGTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGCTCCTCCTGTTCCTCTaGTTCATTCCGAGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: SQGPAGALGTAGGWDAFWLLLFL*FIPRFQ
Trigger: TTGAAACCTCGGAATGAACAAGAGGAACAGGAGGAG...CCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTCTCCTCCTGTTCCTCTaGTTCATTCCGAGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: VRALLVPLALPGVGMHFGLLLFL*FIPRFQ
Trigger: TTGAAACCTCGGAATGAACAAGAGGAACAGGAGGAG...ACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGGGTTGGGATGCATTTaGGTGTCAGAAGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: AGALGTAGGWDAFWCQKWGLGCI*VSEVGP
Trigger: TGGTCCCACTTCTGACACCAAAATGCATCCCAACCC...CCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACGGGTTGGGATGCATTTaGGTGTCAGAAGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: LPGVGMHFGVRSGTSSSDGLGCI*VSEVGP
Trigger: TGGTCCCACTTCTGACACCAAAATGCATCCCAACCC...GTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTGGCACTGCCGGGGGTaGGGATGCATTTTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITWHCRG*GCILVS
Trigger: TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCA...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGATGGGCCCTTCCCTTTaGTTCATTGTGTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: RTRTVPPARQSSVRALLVMGPSL*FIVWVV
Trigger: CACCACCCACACAATGAACAAAAGGGAAGGGCCCAT...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp ACTTGTGAGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCGGTCGCCCGGCGAGCTaGAGCTCCTTGACTGTAGAA +
Preference number: 5 (lower is better)
Translates to: TCEEEVCWRLHEGSACWAGRPAS*SSLTVE
Trigger: TTCTACAGTCAAGGAGCTCAAGCTCGCCGGGCGACC...GGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCTCACAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR CAA 90 bp CAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTGCTGCTGACGTGTGTTaGAACTTTTCGCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: QGPAGALGTAGGWDAFWCAADVC*NFSLFF
Trigger: GAAGAAAAGCGAAAAGTTCAAACACACGTCAGCAGC...ACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGCCTGTTGCTGAGTTaGATGGCTAAGGAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: LLVPLALPGVGMHFGVRSGLLLS*MAKESF
Trigger: GAAGGACTCCTTAGCCATCAAACTCAGCAACAGGCC...ACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGACACGCTTGGAGGGCCTGTaGCTGAGTTTGATGGCTAAG +
Preference number: 5 (lower is better)
Translates to: VCWRLHEGSACWAWLERTRLEGL*LSLMAK
Trigger: CTTAGCCATCAAACTCAGCAACAGGCCCTCCAAGCG...TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGTGCTTTTGAATTCATaGAGCTCCTTTCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: GPCWCPWHCRGLGCILVSVLLNS*SSFRMA
Trigger: TGCCATCCGAAAGGAGCTCAATGAATTCAAAAGCAC...TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCCCCTTCAGCTTTCTTaGGACTCAGATGACAGACAC +
Preference number: 5 (lower is better)
Translates to: RTRTVPPARQSSVRALLVPLQLS*DSDDRH
Trigger: GTGTCTGTCATCTGAGTCCAAAGAAAGCTGAAGGGG...CACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCCCCCTTCAGCTTTCTTaGGACTCAGATGACAGACAC +
Preference number: 5 (lower is better)
Translates to: VPLALPGVGMHFGVRSGTPLQLS*DSDDRH
Trigger: GTGTCTGTCATCTGAGTCCAAAGAAAGCTGAAGGGG...GGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGCTGGAGCCAGTACATTaGGCCAAGTGTAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: AGALGTAGGWDAFWCQKWLEPVH*AKCRSP
Trigger: TGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG...CCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGCTGGAGCCAGTACATTaGGCCAAGTGTAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: AWLERTRTVPPARQSSVRLEPVH*AKCRSP
Trigger: TGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG...CCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTATGGGCCCTTCCCTTTaGTTCATTGTGTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LLVPLALPGVGMHFGVRSMGPSL*FIVWVV
Trigger: CACCACCCACACAATGAACAAAAGGGAAGGGCCCAT...ACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACGCGTTTTACTTGACATaGGAGGCAACCGGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: LPGVGMHFGVRSGTSSSDAFYLT*EATGCR
Trigger: TCTGCAACCGGTTGCCTCCAATGTCAAGTAAAACGC...GTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS TCA 90 bp TTATCAGATAAAATGGCCAGAGCACGTTACCTTAGCAACGGAAGGTaGCGCCAGCCTCAGCCTCTGCACCCTCCCCGGCACTTGTTGACC +
Preference number: 5 (lower is better)
Translates to: LSDKMARARYLSNGR*RQPQPLHPPRHLLT
Trigger: GGTCAACAAGTGCCGGGGAGGGTGCAGAGGCTGAGGCTGGCGTCACCTTCCGTTGCTAAGGTAACGTGCTCTGGCCATTTTATCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS GCA 90 bp TACGATGTCGTCATTACAGCTGCCACCGTCAGAGGGTTCATTATGTaGTCAGAGGTGCACAGGGCCTCACTGGCTGCTGGACAGAACAGG +
Preference number: 5 (lower is better)
Translates to: YDVVITAATVRGFIM*SEVHRASLAAGQNR
Trigger: CCTGTTCTGTCCAGCAGCCAGTGAGGCCCTGTGCACCTCTGAGCACATAATGAACCCTCTGACGGTGGCAGCTGTAATGACGACATCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS GCA 90 bp CTAGGAAGACAGGCCAGGAAAGGCCTACGATGTCGTCATTACAGCTaGCACCGTCAGAGGGTTCATTATGTGCTCAGAGGTGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: LGRQARKGLRCRHYS*HRQRVHYVLRGAQG
Trigger: GCCCTGTGCACCTCTGAGCACATAATGAACCCTCTGACGGTGGCAGCTGTAATGACGACATCGTAGGCCTTTCCTGGCCTGTCTTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 90 bp ATGTGGGCTGATGTAGTGTATGTAGGGGCTGTCTTCAGGAGGCCGTaGTTTTCCAGGGAACACAGTTCGAGCCCAAGAGGACGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: MWADVVYVGAVFRRP*FSREHSSSPRGRPR
Trigger: TCTTGGGCGTCCTCTTGGGCTCGAACTGTGTTCCCTGGAAAACCACGGCCTCCTGAAGACAGCCCCTACATACACTACATCAGCCCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS-3UTR CAA 90 bp TTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTCGTTTCAGTACGGCGTGTCGCTCTaGGAGCGCACTCTCCGGATG +
Preference number: 5 (lower is better)
Translates to: LQKVGFSPGHLCSTSSFQYGVSL*ERTLRM
Trigger: CATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTA...CTGAAACGAGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp CAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCTACGGCGTGTCGCTCTaGGAGCGCACTCTCCGGATG +
Preference number: 5 (lower is better)
Translates to: QLRSVHSFLASTSKGPQTYGVSL*ERTLRM
Trigger: CATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTA...GGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000674637.1
CDS-3UTR CAA 90 bp CTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACAGGGAGTCCTCTTCATaGGATATAGAGAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LPGVGMHFGVRSGTSSSDRESSS*DIESSP
Trigger: TGGGGAACTCTCTATATCCAATGAAGAGGACTCCCT...GTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCAGGGAGTCCTCTTCATaGGATATAGAGAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: CRGLGCILVSEVGPAARTRESSS*DIESSP
Trigger: TGGGGAACTCTCTATATCCAATGAAGAGGACTCCCT...GGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACATGGCCAGCGTTTTGTaGAGCTCGTCTATCATTCTG +
Preference number: 5 (lower is better)
Translates to: LPGVGMHFGVRSGTSSSDMASVL*SSSIIL
Trigger: CAGAATGATAGACGAGCTCAACAAAACGCTGGCCAT...GTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACACATACGCTTGGAGGGCCTGTaGCTGAGTTTGATGGCTAAG +
Preference number: 5 (lower is better)
Translates to: SGTSSSDRRAITFAFSHIRLEGL*LSLMAK
Trigger: CTTAGCCATCAAACTCAGCAACAGGCCCTCCAAGCG...TATGTGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GGAGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTTTCGGATGGCAGCTTaGTCTGCAGCGGTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GGKSQGQLRSVHSFLASTFRMAA*SAAVRR
Trigger: CCGCCTCACCGCTGCAGACAAAGCTGCCATCCGAAA...AGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGGTGCTTTTGAATTCATaGAGCTCCTTTCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: AGGWDAFWCQKWDQQLGPVLLNS*SSFRMA
Trigger: TGCCATCCGAAAGGAGCTCAATGAATTCAAAAGCAC...CGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTGGGTTGGGATGCATTTaGGTGTCAGAAGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITGLGCI*VSEVGP
Trigger: TGGTCCCACTTCTGACACCAAAATGCATCCCAACCC...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTCCCCTTCAGCTTTCTTaGGACTCAGATGACAGACAC +
Preference number: 5 (lower is better)
Translates to: LLVPLALPGVGMHFGVRSPLQLS*DSDDRH
Trigger: GTGTCTGTCATCTGAGTCCAAAGAAAGCTGAAGGGG...ACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCACCAGATCATTAGCTTaGCACAGTACCCCCAAAACA +
Preference number: 5 (lower is better)
Translates to: GQGPFHLPDSLQSGPCWCTRSLA*HSTPKT
Trigger: TGTTTTGGGGGTACTGTGCAAAGCTAATGATCTGGT...GCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACAGTGTTCACTCCTTCTaGGCATCAACTTCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: LPGVGMHFGVRSGTSSSDSVHSF*ASTSKG
Trigger: GCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACT...GTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGAGTGTTCACTCCTTCTaGGCATCAACTTCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: HCRGLGCILVSEVGPAARSVHSF*ASTSKG
Trigger: GCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACT...CCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACATGGGCCCTTCCCTTTaGTTCATTGTGTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SEVGPAARTAEPSLLRFHMGPSL*FIVWVV
Trigger: CACCACCCACACAATGAACAAAAGGGAAGGGCCCAT...GTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTATGGGCCCTTCCCTTTaGTTCATTGTGTGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITMGPSL*FIVWVV
Trigger: CACCACCCACACAATGAACAAAAGGGAAGGGCCCAT...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACAAGTAGCAGGACTGGTTaGGCTGAAGGATCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: QKWDQQLGPPSHHFCVFTSSRTG*AEGSWD
Trigger: GTCCCAAGATCCTTCAGCCAAACCAGTCCTGCTACT...TGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS TCA 90 bp ATTACTAGCCTCAGACTTCTGATCCTACAGGTCCCTTCAGAGCCGTaGAGGCGGGCATCCTGTGACACAGCTGACACAGCATGGAGCCTT +
Preference number: 5 (lower is better)
Translates to: ITSLRLLILQVPSEP*RRASCDTADTAWSL
Trigger: AAGGCTCCATGCTGTGTCAGCTGTGTCACAGGATGCCCGCCTTCACGGCTCTGAAGGGACCTGTAGGATCAGAAGTCTGAGGCTAGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 90 bp GGAACACAGTTCGAGCCCAAGAGGACGCCCAAGAGTTGGCACTGCTaGTCCCATTCTTGCTTCATCCATATCCCCAAAAAGGGAAACGCC +
Preference number: 5 (lower is better)
Translates to: GTQFEPKRTPKSWHC*SHSCFIHIPKKGNA
Trigger: GGCGTTTCCCTTTTTGGGGATATGGATGAAGCAAGAATGGGACCAGCAGTGCCAACTCTTGGGCGTCCTCTTGGGCTCGAACTGTGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS CCA 90 bp TCTCTGGGCACAGCCTCCCAGGCTGCTGCTCCTCCTCCTGTAAAATaGGCACAGTATTATGTGCCTTGTGTTTTCTCCGATTCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: SLGTASQAAAPPPVK*AQYYVPCVFSDSAA
Trigger: GGCTGCTGAATCGGAGAAAACACAAGGCACATAATACTGTGCCCATTTTACAGGAGGAGGAGCAGCAGCCTGGGAGGCTGTGCCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS-3UTR CAA 90 bp CACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGGCTGCTGACGTGTGTTaGAACTTTTCGCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: HCRGLGCILVSEVGPAARAADVC*NFSLFF
Trigger: GAAGAAAAGCGAAAAGTTCAAACACACGTCAGCAGC...CCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp ACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGAAGGGAGTCCTCTTCATaGGATATAGAGAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: TAGGWDAFWCQKWDQQLGRESSS*DIESSP
Trigger: TGGGGAACTCTCTATATCCAATGAAGAGGACTCCCT...TCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTGTCATGGCCAGCGTTTaGTTGAGCTCGTCTATCATT +
Preference number: 5 (lower is better)
Translates to: WCQKWDQQLGPPSHHFCVVMASV*LSSSII
Trigger: AATGATAGACGAGCTCAACAAAACGCTGGCCATGAC...AACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGCTTCCTCCTCTTCTCTaGTATACAGGCAAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: HCRGLGCILVSEVGPAARLPPLL*YTGKKS
Trigger: ACTCTTCTTGCCTGTATACAAGAGAAGAGGAGGAAG...CCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTTCGGATGGCAGCTTaGTCTGCAGCGGTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHFRMAA*SAAVRR
Trigger: CCGCCTCACCGCTGCAGACAAAGCTGCCATCCGAAA...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCGTGCTTTTGAATTCATaGAGCTCCTTTCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: VPLALPGVGMHFGVRSGTVLLNS*SSFRMA
Trigger: TGCCATCCGAAAGGAGCTCAATGAATTCAAAAGCAC...GGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AGTCAGGGCCCTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGAAGGTCGGTGAAACCTaGTTAAGTGTCTACTCAATT +
Preference number: 5 (lower is better)
Translates to: SQGPAGALGTAGGWDAFWKVGET*LSVYSI
Trigger: AATTGAGTAGACACTTAACAAGGTTTCACCGACCTT...CCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAGGGCCCTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGACCAGATCATTAGCTTaGCACAGTACCCCCAAAACA +
Preference number: 5 (lower is better)
Translates to: PGWRGQGPFHLPDSLQSGTRSLA*HSTPKT
Trigger: TGTTTTGGGGGTACTGTGCAAAGCTAATGATCTGGT...CCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CTGCTGGTGCCCTTGGCACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTAGTGTTCACTCCTTCTaGGCATCAACTTCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: LLVPLALPGVGMHFGVRSSVHSF*ASTSKG
Trigger: GCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACT...ACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTGCCAAGGGCACCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACAAGTCCTGCGTTTTACTaGACATTGGAGGCAACCGGT +
Preference number: 5 (lower is better)
Translates to: QKWDQQLGPPSHHFCVFTSPAFY*TLEATG
Trigger: ACCGGTTGCCTCCAATGTCAAGTAAAACGCAGGACT...TGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS-3UTR CAA 90 bp CAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTTCTTCAGGGAGGTTCTaGACCGTGAGAGGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: QDQGAAKGAGFNSPISHLSSGRF*TVRGRC
Trigger: GCACCTCCCTCTCACGGTCAAGAACCTCCCTGAAGA...AAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS TCA 90 bp GTGGTCTGGATGTTGGGTCACCAGGGACAGCTAGAGGGCACACGGTaGAAATTTACAGAAGCACAGAATACTAGGGCCATGAGGGGACCT +
Preference number: 5 (lower is better)
Translates to: VVWMLGHQGQLEGTR*KFTEAQNTRAMRGP
Trigger: AGGTCCCCTCATGGCCCTAGTATTCTGTGCTTCTGTAAATTTTCACCGTGTGCCCTCTAGCTGTCCCTGGTGACCCAACATCCAGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS GCA 90 bp ATTTCGGACAGGGCAGGCAGAGACAGCTGGCTGGAGCTCAGGGACTaGCCATTTTCTAGGGAGTCCTCTTCATTGGATATAGAGAGTTCC +
Preference number: 5 (lower is better)
Translates to: ISDRAGRDSWLELRD*PFSRESSSLDIESS
Trigger: GGAACTCTCTATATCCAATGAAGAGGACTCCCTAGAAAATGGGCAGTCCCTGAGCTCCAGCCAGCTGTCTCTGCCTGCCCTGTCCGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000406205.7
ENST00000434977.1
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS GCA 90 bp CACAACAGTTGGCACTTGTCTTATTTCTGGAAGGCCCATAGGTCCTaGTTTGGTGACCCCATCACCCGAGTGCAACCCAGAGCTGTGGTA +
Preference number: 5 (lower is better)
Translates to: HNSWHLSYFWKAHRS*FGDPITRVQPRAVV
Trigger: TACCACAGCTCTGGGTTGCACTCGGGTGATGGGGTCACCAAAGCAGGACCTATGGGCCTTCCAGAAATAAGACAAGTGCCAACTGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS GCA 90 bp CAGGGAACACAGTTCGAGCCCAAGAGGACGCCCAAGAGTTGGCACTaGTGGTCCCATTCTTGCTTCATCCATATCCCCAAAAAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: QGTQFEPKRTPKSWH*WSHSCFIHIPKKGN
Trigger: GTTTCCCTTTTTGGGGATATGGATGAAGCAAGAATGGGACCAGCAGTGCCAACTCTTGGGCGTCCTCTTGGGCTCGAACTGTGTTCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS GCA 90 bp CCACTTCCTCAGCTTAAAGGCTGCCCAAAGCTCTTTGCTCCCACATaGATCCGCCTCTCTGGGTCTGTTTCCTGGCTTTCCAATAGCTGT +
Preference number: 5 (lower is better)
Translates to: PLPQLKGCPKLFAPT*IRLSGSVSWLSNSC
Trigger: ACAGCTATTGGAAAGCCAGGAAACAGACCCAGAGAGGCGGATGCATGTGGGAGCAAAGAGCTTTGGGCAGCCTTTAAGCTGAGGAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS CCA 90 bp GCGGTAAAAACCCAAGCTCAAAGGACCTGTAGTCTCCCAGGGATCTaGACAAGCCACAGCGGGGATCTGATATCTTTGAGAGAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: AVKTQAQRTCSLPGI*TSHSGDLISLREPR
Trigger: TCTGGGCTCTCTCAAAGATATCAGATCCCCGCTGTGGCTTGTCCAGATCCCTGGGAGACTACAGGTCCTTTGAGCTTGGGTTTTTACCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 90 bp CTAAAGTGGAACCGCATGCCTGCCTTCCTACTATCTTCCCTCTCATaGCACCCTCCAACCCACTCATGTCCCACAAGTGGGAGAGCTTTA +
Preference number: 5 (lower is better)
Translates to: LKWNRMPAFLLSSLS*HPPTHSCPTSGRAL
Trigger: TAAAGCTCTCCCACTTGTGGGACATGAGTGGGTTGGAGGGTGCCATGAGAGGGAAGATAGTAGGAAGGCAGGCATGCGGTTCCACTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp ACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCACCTCCCCGGCACTTGTaGACCCCTTTCAACAGGACA +
Preference number: 5 (lower is better)
Translates to: TSKGPQTKCHVWSQYIWPPPRHL*TPFNRT
Trigger: TGTCCTGTTGAAAGGGGTCAACAAGTGCCGGGGAGG...TGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS-3UTR CAA 90 bp TGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTGCTGCTGACGTGTGTTaGAACTTTTCGCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: WCQKWDQQLGPPSHHFCVAADVC*NFSLFF
Trigger: GAAGAAAAGCGAAAAGTTCAAACACACGTCAGCAGC...AACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTCATGGCCAGCGTTTaGTTGAGCTCGTCTATCATT +
Preference number: 5 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCVMASV*LSSSII
Trigger: AATGATAGACGAGCTCAACAAAACGCTGGCCATGAC...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTCACAACAGTTGGCACTaGTCTTATTTCTGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITHNSWH*SYFWKA
Trigger: GGCCTTCCAGAAATAAGACAAGTGCCAACTGTTGTG...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGCTTCCTCCTCTTCTCTaGTATACAGGCAAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: EVCWRLHEGSACWAWLERLPPLL*YTGKKS
Trigger: ACTCTTCTTGCCTGTATACAAGAGAAGAGGAGGAAG...CCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TCAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTCGCTTGGAGGGCCTGTaGCTGAGTTTGATGGCTAAG +
Preference number: 5 (lower is better)
Translates to: SRPRGCQRCRIQQSNLPSRLEGL*LSLMAK
Trigger: CTTAGCCATCAAACTCAGCAACAGGCCCTCCAAGCG...AGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp CTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGTCTTCCAGCTCTCGCTaGGAGGGCCTGTTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: LLLGINFKGPPNQMSCLESSSSR*EGLLLS
Trigger: ACTCAGCAACAGGCCCTCCAAGCGAGAGCTGGAAGA...CTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAATCTTCCAGCTCTCGCTaGGAGGGCCTGTTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: LQRAPKPNVMSGASTFGQSSSSR*EGLLLS
Trigger: ACTCAGCAACAGGCCCTCCAAGCGAGAGCTGGAAGA...TTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGCTCCTCCTGTTCCTCTaGTTCATTCCGAGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: EEVCWRLHEGSACWAWLELLLFL*FIPRFQ
Trigger: TTGAAACCTCGGAATGAACAAGAGGAACAGGAGGAG...CTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGTCAGGGCCCTGCTGGTGCAAGGTCGGTGAAACCTaGTTAAGTGTCTACTCAATT +
Preference number: 5 (lower is better)
Translates to: GQGPFHLPDSLQSGPCWCKVGET*LSVYSI
Trigger: AATTGAGTAGACACTTAACAAGGTTTCACCGACCTT...GCACCAGCAGGGCCCTGACTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GCTGGGCCTGGCTGGAGAGGACAAGGACCGTTCCACCTGCCAGACAGTCTTCAGAAGGTCGGTGAAACCTaGTTAAGTGTCTACTCAATT +
Preference number: 5 (lower is better)
Translates to: AGPGWRGQGPFHLPDSLQKVGET*LSVYSI
Trigger: AATTGAGTAGACACTTAACAAGGTTTCACCGACCTT...CTGAAGACTGTCTGGCAGGTGGAACGGTCCTTGTCCTCTCCAGCCAGGCCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS GCA 90 bp TTGTTCATTCCGAGGTTTCAAAATGTTCCTCTGTTCCAGTTCCTCTaGAGTTGGCCTCTGGCTCAGCCGCCTGGTGAGCTTGGTGCCAAT +
Preference number: 5 (lower is better)
Translates to: LFIPRFQNVPLFQFL*SWPLAQPPGELGAN
Trigger: ATTGGCACCAAGCTCACCAGGCGGCTGAGCCAGAGGCCAACTGCAGAGGAACTGGAACAGAGGAACATTTTGAAACCTCGGAATGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332995.12
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS GCA 90 bp AATGGTGAAAGGCAGTTTTCCTCGAATGAGAGCATCAGACAGGCATaGCCGGGACCAGCTGTGGGAATCCTGAGAGACAGACATGAAGCA +
Preference number: 5 (lower is better)
Translates to: NGERQFSSNESIRQA*PGPAVGILRDRHEA
Trigger: TGCTTCATGTCTGTCTCTCAGGATTCCCACAGCTGGTCCCGGGCATGCCTGTCTGATGCTCTCATTCGAGGAAAACTGCCTTTCACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS GCA 90 bp TTGTTCATTCCGAGGTTTCAAAATGTTCCTCTGTTCCAGTTCCTCTaGAGTTGGCCTCTGGCTCAGCCGCCTGTCTCCTGCCTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: LFIPRFQNVPLFQFL*SWPLAQPPVSCLFC
Trigger: ACAGAAGAGGCAGGAGACAGGCGGCTGAGCCAGAGGCCAACTGCAGAGGAACTGGAACAGAGGAACATTTTGAAACCTCGGAATGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489548.1
CDS-3UTR CAA 90 bp CACTGCCGGGGGTTGGGATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGAGAGTGTCTTTGATCTaGCTAAATATTCCCGGTGAA +
Preference number: 5 (lower is better)
Translates to: HCRGLGCILVSEVGPAARRVSLI*LNIPGE
Trigger: TTCACCGGGAATATTTAGCAAGATCAAAGACACTCT...CCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCATCCCAACCCCCGGCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS-3UTR CAA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCCCAGCCAGAGTGTCTTaGATCTTGCTAAATATTCCC +
Preference number: 5 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCPARVS*ILLNIP
Trigger: GGGAATATTTAGCAAGATCAAAGACACTCTGGCTGG...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS-3UTR CAA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCCTTCCTCCTCTTCTCTaGTATACAGGCAAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCLPPLL*YTGKKS
Trigger: ACTCTTCTTGCCTGTATACAAGAGAAGAGGAGGAAG...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGAGAGGACACTTCCTCCTCTTCTCTaGTATACAGGCAAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: VCWRLHEGSACWAWLERTLPPLL*YTGKKS
Trigger: ACTCTTCTTGCCTGTATACAAGAGAAGAGGAGGAAG...TGTCCTCTCCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATGTCAGTCTTCCAGCTCTCGCTaGGAGGGCCTGTTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: ASVFPNIIMMLDCQGECQSSSSR*EGLLLS
Trigger: ACTCAGCAACAGGCCCTCCAAGCGAGAGCTGGAAGA...CTGACATTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp TGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATCTTGGTGCCAATCTGTaGCCTCAGCTCCAGCCGCTC +
Preference number: 5 (lower is better)
Translates to: CHVWSQYIWPSVEVQPDHLGANL*PQLQPL
Trigger: GAGCGGCTGGAGCTGAGGCAACAGATTGGCACCAAG...ATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAGACATGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTGCTTTTGAATTCATaGAGCTCCTTTCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCVLLNS*SSFRMA
Trigger: TGCCATCCGAAAGGAGCTCAATGAATTCAAAAGCAC...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AGGAAGAGGTTTGCTGGAGACTTCATGAAGGTAGTGCCTGCTGGGCCTGGCTGGACCAGATCATTAGCTTaGCACAGTACCCCCAAAACA +
Preference number: 5 (lower is better)
Translates to: RKRFAGDFMKVVPAGPGWTRSLA*HSTPKT
Trigger: TGTTTTGGGGGTACTGTGCAAAGCTAATGATCTGGT...CCAGCCAGGCCCAGCAGGCACTACCTTCATGAAGTCTCCAGCAAACCTCTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS TCA 90 bp CAGACCCAGTTAGAACATAAAGAGGTCTGTGGCCCCGGGGACATGTaGGAGAATGTGTCTGTCTGCAGAGAACAATGGCTGCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QTQLEHKEVCGPGDM*ENVSVCREQWLLFF
Trigger: GAAGAAGAGCAGCCATTGTTCTCTGCAGACAGACACATTCTCTCACATGTCCCCGGGGCCACAGACCTCTTTATGTTCTAACTGGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489548.1
CDS-3UTR CAA 90 bp CTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGGGCCTGTTGCTGAGTTaGATGGCTAAGGAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: LLLGINFKGPPNQMSCLEGLLLS*MAKESF
Trigger: GAAGGACTCCTTAGCCATCAAACTCAGCAACAGGCC...CTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TGGTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCCTTGGTGCCAATCTGTaGCCTCAGCTCCAGCCGCTC +
Preference number: 5 (lower is better)
Translates to: WYFVQVWPLLTGCKLATILGANL*PQLQPL
Trigger: GAGCGGCTGGAGCTGAGGCAACAGATTGGCACCAAG...GATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp TGGTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCTTTCGGATGGCAGCTTaGTCTGCAGCGGTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: WYFVQVWPLLTGCKLATIFRMAA*SAAVRR
Trigger: CCGCCTCACCGCTGCAGACAAAGCTGCCATCCGAAA...GATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp CAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGCTGGAGCCAGTACATTaGGCCAAGTGTAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: QRAPKPNVMSGASTFGQVLEPVH*AKCRSP
Trigger: TGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG...CACTTGGCCAAATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCGTTTTCACAATCCAGGAAAAGTTTTaGGACCATATCATAGCCTCC +
Preference number: 5 (lower is better)
Translates to: QKWDQQLGPPSHHFCVFTIQEKF*DHIIAS
Trigger: GGAGGCTATGATATGGTCCAAAAACTTTTCCTGGAT...TGTGAAAACGCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379335.8
CDS-3UTR CAA 90 bp CTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTGAACACCGGCACTTGTaGACCCCTTTCAACAGGACA +
Preference number: 5 (lower is better)
Translates to: LRLCRKLVLARAICVPLPEHRHL*TPFNRT
Trigger: TGTCCTGTTGAAAGGGGTCAACAAGTGCCGGTGTTC...AGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp GCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATGTCAGCTGGAACACCGGCACTaGTTGACCCCTTTCAACAGG +
Preference number: 5 (lower is better)
Translates to: ASVFPNIIMMLDCQGECQLEHRH*LTPFNR
Trigger: CCTGTTGAAAGGGGTCAACAAGTGCCGGTGTTCCAG...CTGACATTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp AGTGAAACTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCCCCACCTTGGGGTCGTaGGTAGTCTGGTGCTTATCA +
Preference number: 5 (lower is better)
Translates to: SETQTLQKVGFSPGHLCSPTLGS*VVWCLS
Trigger: TGATAAGCACCAGACTACCAACGACCCCAAGGTGGG...GGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAGTTTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp CTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATTAGCTTTGACGTTGTTGTTGTTGTaGGGGGCGGGCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LEPVHLAKCRSPTRSLALTLLLL*GAGSFR
Trigger: CCTGAAGGAGCCCGCCCCCAACAACAACAACAACGT...CAAAGCTAATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS TCA 90 bp CGCCCGGCGAGCTTGAGCTCCTTGACTGTAGAAGAATCTTTGAGCTaGCTCAACATCCAAGAGTCTGTGAGCAGACTCTACATCCAGAAA +
Preference number: 5 (lower is better)
Translates to: RPASLSSLTVEESLS*LNIQESVSRLYIQK
Trigger: TTTCTGGATGTAGAGTCTGCTCACAGACTCTTGGATGTTGAGTCAGCTCAAAGATTCTTCTACAGTCAAGGAGCTCAAGCTCGCCGGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332995.12
ENST00000379348.3
ENST00000379350.5
ENST00000674595.1
ENST00000674637.1
ENST00000676159.1
CDS TCA 90 bp ATGAGAGCATCAGACAGGCATGCCCGGGACCAGCTGTGGGAATCCTaGGAGACAGACATGAAGCACTTCACTTGGAAATGCTTTCTTAGT +
Preference number: 5 (lower is better)
Translates to: MRASDRHARDQLWES*ETDMKHFTWKCFLS
Trigger: ACTAAGAAAGCATTTCCAAGTGAAGTGCTTCATGTCTGTCTCTCAGGATTCCCACAGCTGGTCCCGGGCATGCCTGTCTGATGCTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS-3UTR CAA 90 bp CAAGACCAAGGGGCTGCCAAAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCACAACAGTTGGCACTaGTCTTATTTCTGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: QDQGAAKGAGFNSPISHLHNSWH*SYFWKA
Trigger: GGCCTTCCAGAAATAAGACAAGTGCCAACTGTTGTG...AAGATGGGAGATTGGACTGTTGAATCCTGCACCTTTGGCAGCCCCTTGGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp TTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTTTTGCAAGGTCGGTGAAACCTaGTTAAGTGTCTACTCAATT +
Preference number: 5 (lower is better)
Translates to: FWCQKWDQQLGPPSHHFCKVGET*LSVYSI
Trigger: AATTGAGTAGACACTTAACAAGGTTTCACCGACCTT...GCAAAAGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp ATGCATTTTGGTGTCAGAAGTGGGACCAGCAGCTCGGACCGCCGAGCCATCACTAAGGTCGGTGAAACCTaGTTAAGTGTCTACTCAATT +
Preference number: 5 (lower is better)
Translates to: MHFGVRSGTSSSDRRAITKVGET*LSVYSI
Trigger: AATTGAGTAGACACTTAACAAGGTTTCACCGACCTT...AGTGATGGCTCGGCGGTCCGAGCTGCTGGTCCCACTTCTGACACCAAAATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CTCCATGCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAACAGAAGTGGTCCACTTaGGAAGTCCCGTGTGGATGT +
Preference number: 5 (lower is better)
Translates to: LHASVFPNIIMMLDCQGEQKWST*EVPCGC
Trigger: ACATCCACACGGGACTTCCAAAGTGGACCACTTCTG...TTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGCATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp CTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGGGATCTGTTAAGTGGTaGGCAATCCTGGTAGTGGGT +
Preference number: 5 (lower is better)
Translates to: LLLGINFKGPPNQMSCLEGSVKW*AILVVG
Trigger: ACCCACTACCAGGATTGCCAACCACTTAACAGATCC...CTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS GCA 90 bp AATGTGTCTGTCTGCAGAGAACAATGGCTGCTCTTCTTCTGGTCCTaGTCCTCTTATTTCGGAGGCTTAGAAGACATGAGTGGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: NVSVCREQWLLFFWS*SSYFGGLEDMSGKG
Trigger: GCCTTTGCCACTCATGTCTTCTAAGCCTCCGAAATAAGAGGAGCAGGACCAGAAGAAGAGCAGCCATTGTTCTCTGCAGACAGACACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489548.1
CDS CCA 90 bp GGAGCCTTCATCTCCTATGTGCGTTTCTTAGGTCACTCTGAGGGGTaGGGCCACAAGCTACCACCTACAGAATTGATACCTTTAGTTCAA +
Preference number: 5 (lower is better)
Translates to: GAFISYVRFLGHSEG*GHKLPPTELIPLVQ
Trigger: TTGAACTAAAGGTATCAATTCTGTAGGTGGTAGCTTGTGGCCCCACCCCTCAGAGTGACCTAAGAAACGCACATAGGAGATGAAGGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS-3UTR CAA 90 bp CAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCATGGCCAGCGTTTTGTaGAGCTCGTCTATCATTCTG +
Preference number: 5 (lower is better)
Translates to: QLRSVHSFLASTSKGPQTMASVL*SSSIIL
Trigger: CAGAATGATAGACGAGCTCAACAAAACGCTGGCCAT...GGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp TCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCATGGCCAGCGTTTTGTaGAGCTCGTCTATCATTCTG +
Preference number: 5 (lower is better)
Translates to: SFLASTSKGPQTKCHVWSMASVL*SSSIIL
Trigger: CAGAATGATAGACGAGCTCAACAAAACGCTGGCCAT...GCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AGGGAAAAGCCAGGGGCAACTGAGAAGTGTTCACTCCTTCTTGGCATCAACTTCGTCATGGCCAGCGTTTaGTTGAGCTCGTCTATCATT +
Preference number: 5 (lower is better)
Translates to: REKPGATEKCSLLLGINFVMASV*LSSSII
Trigger: AATGATAGACGAGCTCAACAAAACGCTGGCCATGAC...GAAGTTGATGCCAAGAAGGAGTGAACACTTCTCAGTTGCCCCTGGCTTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAGCCAGTACATCACAACAGTTGGCACTaGTCTTATTTCTGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: GINFKGPPNQMSCLEPVHHNSWH*SYFWKA
Trigger: GGCCTTCCAGAAATAAGACAAGTGCCAACTGTTGTG...ATGTACTGGCTCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AAGTGTTCACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCAGGGTTGGGATGCATTTaGGTGTCAGAAGTGGGACCA +
Preference number: 5 (lower is better)
Translates to: KCSLLLGINFKGPPNQMSGLGCI*VSEVGP
Trigger: TGGTCCCACTTCTGACACCAAAATGCATCCCAACCC...TGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGGCCTCTGCTGACTGGTaGCAAATTGGCAACAATCTT +
Preference number: 5 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWASADW*QIGNNL
Trigger: AAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGC...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp AAGGTGCAGGATTCAACAGTCCAATCTCCCATCTTCAGGGAGGTTCTTGACCGTGTATTTTGTTCAGGTTaGGCCTCTGCTGACTGGTTG +
Preference number: 5 (lower is better)
Translates to: KVQDSTVQSPIFREVLDRVFCSG*ASADWL
Trigger: CAACCAGTCAGCAGAGGCCAAACCTGAACAAAATAC...ACGGTCAAGAACCTCCCTGAAGATGGGAGATTGGACTGTTGAATCCTGCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS GCA 90 bp GTTGACCCCTTTCAACAGGACACGGTAGAGTACAAAACAAAGCAGTaGGACGCTTCTGAGCCCGCAAGCACAAATGAACAGCTTCTAATT +
Preference number: 5 (lower is better)
Translates to: VDPFQQDTVEYKTKQ*DASEPASTNEQLLI
Trigger: AATTAGAAGCTGTTCATTTGTGCTTGCGGGCTCAGAAGCGTCGCACTGCTTTGTTTTGTACTCTACCGTGTCCTGTTGAAAGGGGTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332995.12
ENST00000676159.1
CDS CCA 90 bp ATTGTCATCACATTCAATCACAACAGTTGGCACTTGTCTTATTTCTaGAAGGCCCATAGGTCCTGCTTTGGTGACCCCATCACCCGAGTG +
Preference number: 5 (lower is better)
Translates to: IVITFNHNSWHLSYF*KAHRSCFGDPITRV
Trigger: CACTCGGGTGATGGGGTCACCAAAGCAGGACCTATGGGCCTTCCAGAAATAAGACAAGTGCCAACTGTTGTGATTGAATGTGATGACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CCA 90 bp CTTCTGGTCCTGCTCCTCTTATTTCGGAGGCTTAGAAGACATGAGTaGCAAAGGCACAGAAATGATACTTCTGTGGCCAGGCGTGAAATT +
Preference number: 5 (lower is better)
Translates to: LLVLLLLFRRLRRHE*QRHRNDTSVARREI
Trigger: AATTTCACGCCTGGCCACAGAAGTATCATTTCTGTGCCTTTGCCACTCATGTCTTCTAAGCCTCCGAAATAAGAGGAGCAGGACCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489548.1
CDS-3UTR CAA 90 bp AGAATGTCAGGGAATAACAGAAGTGGTCCACTTTGGAAGTCCCGTGTGGATGTGATGGCCAGCGTTTTGTaGAGCTCGTCTATCATTCTG +
Preference number: 5 (lower is better)
Translates to: RMSGNNRSGPLWKSRVDVMASVL*SSSIIL
Trigger: CAGAATGATAGACGAGCTCAACAAAACGCTGGCCAT...CACATCCACACGGGACTTCCAAAGTGGACCACTTCTGTTATTCCCTGACATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp AGTGAAACTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCGTCATGGCCAGCGTTTaGTTGAGCTCGTCTATCATT +
Preference number: 5 (lower is better)
Translates to: SETQTLQKVGFSPGHLCSVMASV*LSSSII
Trigger: AATGATAGACGAGCTCAACAAAACGCTGGCCATGAC...GGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAGTTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGACTCCTCCTGTTCCTCTaGTTCATTCCGAGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGLLLFL*FIPRFQ
Trigger: TTGAAACCTCGGAATGAACAAGAGGAACAGGAGGAG...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTCCTCGTTTCAGTAACCTCCTCCTGTTCCTCTaGTTCATTCCGAGGTTTCAA +
Preference number: 5 (lower is better)
Translates to: RKLVLARAICVPLPRFSNLLLFL*FIPRFQ
Trigger: TTGAAACCTCGGAATGAACAAGAGGAACAGGAGGAG...GTTACTGAAACGAGGAAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp ACTCCTTCTTGGCATCAACTTCAAAGGGCCCCCAAACCAAATGTCATGTCTGGAAGTGTTCACTCCTTCTaGGCATCAACTTCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: TPSWHQLQRAPKPNVMSGSVHSF*ASTSKG
Trigger: GCCCTTTGAAGTTGATGCCAAGAAGGAGTGAACACT...TCCAGACATGACATTTGGTTTGGGGGCCCTTTGAAGTTGATGCCAAGAAGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AAACTCAGACTTTGCAGAAAGTTGGTTTTAGCCCGGGCCATCTGTGTTCCACTTAGACTTTGCAGAAAGTaGGTTTTAGCCCGGGCCATC +
Preference number: 5 (lower is better)
Translates to: KLRLCRKLVLARAICVPLRLCRK*VLARAI
Trigger: GATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCT...AAGTGGAACACAGATGGCCCGGGCTAAAACCAACTTTCTGCAAAGTCTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS GCA 90 bp CTGCGTTGTTTCAAATTGCTACTGAGCAGGCTGACCTTGTCATTTTaGCTTCTTTACATCACATGGGGTTTCAGGTCTCCAGGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: LRCFKLLLSRLTLSF*LLYITWGFRSPGRD
Trigger: ATCTCTGCCTGGAGACCTGAAACCCCATGTGATGTAAAGAAGGCAAAATGACAAGGTCAGCCTGCTCAGTAGCAATTTGAAACAACGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481706.1
CDS CCA 90 bp ATGAATAATGCATACAGTCCACTGGACTTCCTTTATCAGATAAAATaGCCAGAGCACGTTACCTTAGCAACGGAAGGTGACGCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: MNNAYSPLDFLYQIK*PEHVTLATEGDASL
Trigger: GAGGCTGGCGTCACCTTCCGTTGCTAAGGTAACGTGCTCTGGCCATTTTATCTGATAAAGGAAGTCCAGTGGACTGTATGCATTATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS CCA 90 bp TTTCTCTCCAACAATGGGAAGTTTATAATGGCTCAGGTACCAGATTaGGGCCGAAAGGAAGACATCCTACAAGCCAAATGCTTCCCTGAC +
Preference number: 5 (lower is better)
Translates to: FLSNNGKFIMAQVPD*GRKEDILQAKCFPD
Trigger: GTCAGGGAAGCATTTGGCTTGTAGGATGTCTTCCTTTCGGCCCCAATCTGGTACCTGAGCCATTATAAACTTCCCATTGTTGGAGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 90 bp ACTCATTCTTTGTTGAGCCTCCCAGACACTGAAGGAGGCTCATTGTaGTATAGTCCTTGTGTCTGGTGCCGTTTCAAAATGTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: THSLLSLPDTEGGSL*YSPCVWCRFKMFLC
Trigger: ACAGAGGAACATTTTGAAACGGCACCAGACACAAGGACTATACCACAATGAGCCTCCTTCAGTGTCTGGGAGGCTCAACAAAGAATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674953.1
CDS-3UTR CAA 90 bp CCATGCCTCGGTTTTCCCAAATATCATCATGATGCTGGACTGTCAGGGAGAATGGCTGCTGACGTGTGTTaGAACTTTTCGCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: PCLGFPKYHHDAGLSGRMAADVC*NFSLFF
Trigger: GAAGAAAAGCGAAAAGTTCAAACACACGTCAGCAGC...CATTCTCCCTGACAGTCCAGCATCATGATGATATTTGGGAAAACCGAGGCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp GTGTGGATGTGGTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGAGGGAGTCCTCTTCATaGGATATAGAGAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: VWMWYFVQVWPLLTGCKLRESSS*DIESSP
Trigger: TGGGGAACTCTCTATATCCAATGAAGAGGACTCCCT...CAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCACATCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp GTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCTTGGCCTGTTGCTGAGTTaGATGGCTAAGGAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: VFCSGLASADWLQIGNNLGLLLS*MAKESF
Trigger: GAAGGACTCCTTAGCCATCAAACTCAGCAACAGGCC...AAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGCTGACTGGTTGCAAATaGGCAACAATCTTTTCTCCT +
Preference number: 5 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWLTGCK*ATIFSP
Trigger: AGGAGAAAAGATTGTTGCCAATTTGCAACCAGTCAG...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp GTGTGGATGTGGTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGAACACACACCTGGCTTaGAAAGTTTCATCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: VWMWYFVQVWPLLTGCKLNTHLA*KVSSGA
Trigger: TGCCCCAGATGAAACTTTCAAAGCCAGGTGTGTGTT...CAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCACATCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp TGTCATGTCTGGAGCCAGTACATTTGGCCAAGTGTAGAAGTCCAACCAGATCATGCTGCTGACGTGTGTTaGAACTTTTCGCTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: CHVWSQYIWPSVEVQPDHAADVC*NFSLFF
Trigger: GAAGAAAAGCGAAAAGTTCAAACACACGTCAGCAGC...ATGATCTGGTTGGACTTCTACACTTGGCCAAATGTACTGGCTCCAGACATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GTGTGGATGTGGTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGCTTCCTCCTCTTCTCTaGTATACAGGCAAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: VWMWYFVQVWPLLTGCKLLPPLL*YTGKKS
Trigger: ACTCTTCTTGCCTGTATACAAGAGAAGAGGAGGAAG...CAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCACATCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp TTCAGCTTTCTTTGGACTCAGATGACAGACACTTGTGAGGAAGAGGTTTGCTGGGTGCTTTTGAATTCATaGAGCTCCTTTCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: FSFLWTQMTDTCEEEVCWVLLNS*SSFRMA
Trigger: TGCCATCCGAAAGGAGCTCAATGAATTCAAAAGCAC...CCAGCAAACCTCTTCCTCACAAGTGTCTGTCATCTGAGTCCAAAGAAAGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GTGTGGATGTGGTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGGTGCTTTTGAATTCATaGAGCTCCTTTCGGATGGCA +
Preference number: 5 (lower is better)
Translates to: VWMWYFVQVWPLLTGCKLVLLNS*SSFRMA
Trigger: TGCCATCCGAAAGGAGCTCAATGAATTCAAAAGCAC...CAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATACCACATCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp AGTTCAGAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTGGCACTGCCGGGGGTaGGGATGCATTTTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SSEDLHRNGEVNKYQHLWWHCRG*GCILVS
Trigger: TGACACCAAAATGCATCCCAACCCCCGGCAGTGCCA...CCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTCTGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000332995.12
ENST00000379335.8
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp CATCCCCACAGGAGTACCACTGAACACACACCTGGCTTTGAAAGTTTCATCTGGGTGGGAGAGCTTTATTaGGAGATAAATATTGCAACT +
Preference number: 5 (lower is better)
Translates to: HPHRSTTEHTPGFESFIWVGELY*EINIAT
Trigger: AGTTGCAATATTTATCTCCAAATAAAGCTCTCCCAC...CCAGATGAAACTTTCAAAGCCAGGTGTGTGTTCAGTGGTACTCCTGTGGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS-3UTR CAA 90 bp GTATTTTGTTCAGGTTTGGCCTCTGCTGACTGGTTGCAAATTGGCAACAATCTTTGTGGATGTGGTATTTaGTTCAGGTTTGGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: VFCSGLASADWLQIGNNLCGCGI*FRFGLC
Trigger: GCAGAGGCCAAACCTGAACAAAATACCACATCCACA...AAGATTGTTGCCAATTTGCAACCAGTCAGCAGAGGCCAAACCTGAACAAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1
CDS TCA 90 bp GGAGAGAAATTAGAAGTGTGTTGTGGGGTAGGGGGAACAGGGTCATaGATTAAGCCAGAAATATTTGTTCACTATCTTGAGGCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: GEKLEVCCGVGGTGS*IKPEIFVHYLEASV
Trigger: AACACTGGCCTCAAGATAGTGAACAAATATTTCTGGCTTAATTCATGACCCTGTTCCCCCTACCCCACAACACACTTCTAATTTCTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS GCA 90 bp GATGAGGGATTTTTATCAACAGCAGCCAGCTGCAATGCAAAGTCATaGTTTCTAGTCTCAGTTCAAATGGACATTTCCCTTATTTTAGCC +
Preference number: 5 (lower is better)
Translates to: DEGFLSTAASCNAKS*FLVSVQMDISLILA
Trigger: GGCTAAAATAAGGGAAATGTCCATTTGAACTGAGACTAGAAAGCATGACTTTGCATTGCAGCTGGCTGCTGTTGATAAAAATCCCTCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 90 bp ATGAGGCACATTTTCTTTATTGTCATCACATTCAATCACAACAGTTaGCACTTGTCTTATTTCTGGAAGGCCCATAGGTCCTGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: MRHIFFIVITFNHNS*HLSYFWKAHRSCFG
Trigger: ACCAAAGCAGGACCTATGGGCCTTCCAGAAATAAGACAAGTGCCAACTGTTGTGATTGAATGTGATGACAATAAAGAAAATGTGCCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AGTTCAGAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGGTCATGGCCAGCGTTTaGTTGAGCTCGTCTATCATT +
Preference number: 5 (lower is better)
Translates to: SSEDLHRNGEVNKYQHLWVMASV*LSSSII
Trigger: AATGATAGACGAGCTCAACAAAACGCTGGCCATGAC...CCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTCTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AGTTCAGAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGATTGGAGGCAACCGGTaGCAGAAACAGGGAACATTT +
Preference number: 5 (lower is better)
Translates to: SSEDLHRNGEVNKYQHLWIGGNR*QKQGTF
Trigger: AAATGTTCCCTGTTTCTGCAACCGGTTGCCTCCAAT...CCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTCTGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS TCA 90 bp TTCCTCCTCTTCTCTTGTATACAGGCAAGAAGAGTCTTCGTAGTCTaGCTCATGAGGCACATTTTCTTTATTGTCATCACATTCAATCAC +
Preference number: 5 (lower is better)
Translates to: FLLFSCIQARRVFVV*LMRHIFFIVITFNH
Trigger: GTGATTGAATGTGATGACAATAAAGAAAATGTGCCTCATGAGTCAGACTACGAAGACTCTTCTTGCCTGTATACAAGAGAAGAGGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS-3UTR CAA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTAATGGCCAGCGTTTTGTaGAGCTCGTCTATCATTCTG +
Preference number: 5 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLMASVL*SSSIIL
Trigger: CAGAATGATAGACGAGCTCAACAAAACGCTGGCCAT...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS GCA 90 bp TTTAACATTCAAAGGGATGAGGGATTTTTATCAACAGCAGCCAGCTaGAATGCAAAGTCATGCTTTCTAGTCTCAGTTCAAATGGACATT +
Preference number: 5 (lower is better)
Translates to: FNIQRDEGFLSTAAS*NAKSCFLVSVQMDI
Trigger: AATGTCCATTTGAACTGAGACTAGAAAGCATGACTTTGCATTGCAGCTGGCTGCTGTTGATAAAAATCCCTCATCCCTTTGAATGTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS-3UTR CAA 90 bp GAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGTTCTTAACCAGATCATTAGCTTaGCACAGTACCCCCAAAACA +
Preference number: 5 (lower is better)
Translates to: EDLHRNGEVNKYQHLWFLTRSLA*HSTPKT
Trigger: TGTTTTGGGGGTACTGTGCAAAGCTAATGATCTGGT...TAAGAACCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332995.12
ENST00000674637.1
ENST00000675203.1
ENST00000676234.1
CDS-3UTR CAA 90 bp AGTTCAGAAGATTTACATCGTAATGGGGAAGTGAATAAATACCAGCACTTATGGCTGTGCTTTCTTAAATaGAGCAACAGTCTCCTCAAG +
Preference number: 5 (lower is better)
Translates to: SSEDLHRNGEVNKYQHLWLCFLK*SNSLLK
Trigger: CTTGAGGAGACTGTTGCTCAATTTAAGAAAGCACAG...CCATAAGTGCTGGTATTTATTCACTTCCCCATTACGATGTAAATCTTCTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS TCA 72 bp GCGCGGCGAACGGAGCGCAAACCTCCCCGGCTTCGCTaGGCGCGTGGGCTCCGCCATCCGGCCCCCGGGCGC +
Preference number: 6 (lower is better)
Translates to: ARRTERKPPRLR*ARGLRHPAPGR
Trigger: GCGCCCGGGGGCCGGATGGCGGAGCCCACGCGCTCAGCGAAGCCGGGGAGGTTTGCGCTCCGTTCGCCGCGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS TCA 72 bp GCCTGGCTGCAGGTCTCCCTACACGCTCCCCAGCGGTaGGCCCAGCGAGACCCAGCAGACGGTCCTGCCTCC +
Preference number: 6 (lower is better)
Translates to: AWLQVSLHAPQR*AQRDPADGPAS
Trigger: GGAGGCAGGACCGTCTGCTGGGTCTCGCTGGGCTCACCGCTGGGGAGCGTGTAGGGAGACCTGCAGCCAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS GCA 72 bp GGGAGCCGGTGGTGGAGGGGAGGTGCTGGCCGTGGCTaGCGTACTGCAGCTGGTGCTGGATCTGGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: GSRWWRGGAGRG*RTAAGAGSGRA
Trigger: TGCCCTCCCAGATCCAGCACCAGCTGCAGTACGGCAGCCACGGCCAGCACCTCCCCTCCACCACCGGCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS GCA 72 bp GGGAGGTGCTGGCCGTGGCTGCCGTACTGCAGCTGGTaGTGGATCTGGGAGGGCAGGACAGTGTGGTGGTGC +
Preference number: 6 (lower is better)
Translates to: GRCWPWLPYCSW*WIWEGRTVWWC
Trigger: GCACCACCACACTGTCCTGCCCTCCCAGATCCAGCACCAGCTGCAGTACGGCAGCCACGGCCAGCACCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CCA 72 bp GAGGGGAGGTGCTGGCCGTGGCTGCCGTACTGCAGCTaGTGCTGGATCTGGGAGGGCAGGACAGTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: EGRCWPWLPYCS*CWIWEGRTVWW
Trigger: CCACCACACTGTCCTGCCCTCCCAGATCCAGCACCAGCTGCAGTACGGCAGCCACGGCCAGCACCTCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS TCA 72 bp CGCCTTCCTTCCCGGCCGTGCCAATTCCCTGGCCGCTaGCCAGCTCCCACGTGGGATGGAATGGAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: RLPSRPCQFPGR*PAPTWDGMEKG
Trigger: CCCCTTCTCCATTCCATCCCACGTGGGAGCTGGTCAGCGGCCAGGGAATTGGCACGGCCGGGAAGGAAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS TCA 72 bp GAGGAGGGGGTAGGCAGGGCGCTCCTGGGTCCTACCTaGGAAGCTCCACTCCCACCTCTCTCGGGGTCTCAC +
Preference number: 6 (lower is better)
Translates to: EEGVGRALLGPT*EAPLPPLSGSH
Trigger: GTGAGACCCCGAGAGAGGTGGGAGTGGAGCTTCTCAGGTAGGACCCAGGAGCGCCCTGCCTACCCCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS CCA 72 bp AGGTGCTGGCCGTGGCTGCCGTACTGCAGCTGGTGCTaGATCTGGGAGGGCAGGACAGTGTGGTGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: RCWPWLPYCSWC*IWEGRTVWWCW
Trigger: CCAGCACCACCACACTGTCCTGCCCTCCCAGATCCAGCACCAGCTGCAGTACGGCAGCCACGGCCAGCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CCA 72 bp GCCCCTTCGCCTTCCTTCCCGGCCGTGCCAATTCCCTaGCCGCTGACCAGCTCCCACGTGGGATGGAATGGA +
Preference number: 6 (lower is better)
Translates to: APSPSFPAVPIP*PLTSSHVGWNG
Trigger: TCCATTCCATCCCACGTGGGAGCTGGTCAGCGGCCAGGGAATTGGCACGGCCGGGAAGGAAGGCGAAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS GCA 72 bp AACACTCCATTATGGGGACTGCGGCTGAGGCCTGGCTaGAGGTCTCCCTACACGCTCCCCAGCGGTGAGCCC +
Preference number: 6 (lower is better)
Translates to: NTPLWGLRLRPG*RSPYTLPSGEP
Trigger: GGGCTCACCGCTGGGGAGCGTGTAGGGAGACCTGCAGCCAGGCCTCAGCCGCAGTCCCCATAATGGAGTGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS CCA 72 bp GGTACGGCGTGTCGCTCTTGGAGCGCACTCTCCGGATaGGCCGCCGGTCTATATCATCCTCCGAGGATGCCG +
Preference number: 6 (lower is better)
Translates to: GTACRSWSALSG*AAGLYHPPRMP
Trigger: CGGCATCCTCGGAGGATGATATAGACCGGCGGCCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332995.12
ENST00000379348.3
ENST00000379350.5
ENST00000406205.7
ENST00000674595.1
ENST00000674637.1
ENST00000676159.1
CDS CCA 72 bp CTTACTTCTCCTGCGGATGGGTGGGGTGTGGGTGCCTaGGACGAGGGAGTCAGAACGCATCGCCGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: LTSPADGWGVGA*DEGVRTHRRQP
Trigger: AGGCTGGCGGCGATGCGTTCTGACTCCCTCGTCCCAGGCACCCACACCCCACCCATCCGCAGGAGAAGTAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000406205.7
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CAA 72 bp GAGATCCTGGCCTCTGCGAGGTACGGCGTGTCGCTCTaGGAGCGCACTCTCCGGATGGGCCGCCGGTCTATA +
Preference number: 6 (lower is better)
Translates to: EILASARYGVSL*ERTLRMGRRSI
Trigger: TATAGACCGGCGGCCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332995.12
ENST00000379348.3
ENST00000379350.5
ENST00000406205.7
ENST00000674595.1
ENST00000674637.1
ENST00000676159.1
CDS CAA 90 bp CAGACGGTCCTGCCTCCCACTCTCCAGCACTCCCCTCTGCTTACTTaGTCTGCAGCGGTGAGGCGGGTCCACGGCTTATCTGCCCTGCGG +
Preference number: 6 (lower is better)
Translates to: QTVLPPTLQHSPLLT*SAAVRRVHGLSALR
Trigger: CCGCAGGGCAGATAAGCCGTGGACCCGCCTCACCGCTGCAGACAAAGTAAGCAGAGGGGAGTGCTGGAGAGTGGGAGGCAGGACCGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS GCA 72 bp TGGCTCAGCCGCCTGGTGAGCTTGGTGCCAATCTGTTaGCTCAGCTCCAGCCGCTCCTCATCCGTCTGCCTG +
Preference number: 6 (lower is better)
Translates to: WLSRLVSLVPIC*LSSSRSSSVCL
Trigger: CAGGCAGACGGATGAGGAGCGGCTGGAGCTGAGGCAACAGATTGGCACCAAGCTCACCAGGCGGCTGAGCCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS GCA 72 bp AATACACATGCTACACACGCCCATGCAGCCTCTCGGTaGCAGGCAGCCCCTTCGCCTTCCTTCCCGGCCGTG +
Preference number: 6 (lower is better)
Translates to: NTHATHAHAASR*QAAPSPSFPAV
Trigger: CACGGCCGGGAAGGAAGGCGAAGGGGCTGCCTGGCACCGAGAGGCTGCATGGGCGTGTGTAGCATGTGTATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS CCA 72 bp AGATCCTGGCCTCTGCGAGGTACGGCGTGTCGCTCTTaGAGCGCACTCTCCGGATGGGCCGCCGGTCTATAT +
Preference number: 6 (lower is better)
Translates to: RSWPLRGTACRS*SALSGWAAGLY
Trigger: ATATAGACCGGCGGCCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332995.12
ENST00000379348.3
ENST00000379350.5
ENST00000406205.7
ENST00000674595.1
ENST00000674637.1
ENST00000676159.1
CDS CAA 90 bp CGCCTCCACGATGGTCTCTCCAGCCTCACTCAGAGCCCAGAACAGTaGGCAGGCACACCAACCCCTCCTGGGTGTGACCTGCGGGTACTC +
Preference number: 6 (lower is better)
Translates to: RLHDGLSSLTQSPEQ*AGTPTPPGCDLRVL
Trigger: GAGTACCCGCAGGTCACACCCAGGAGGGGTTGGTGTGCCTGCCAACTGTTCTGGGCTCTGAGTGAGGCTGGAGAGACCATCGTGGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482982.2
ENST00000676234.1
CDS GCA 72 bp CTCAGCTGCCCCCAGGTTAAAGGAGATCCTGGCCTCTaGGAGGTACGGCGTGTCGCTCTTGGAGCGCACTCT +
Preference number: 6 (lower is better)
Translates to: LSCPQVKGDPGL*EVRRVALGAHS
Trigger: AGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000406205.7
ENST00000674595.1
ENST00000674637.1
ENST00000676159.1
CDS GCA 72 bp AACGCCTGCCCCCAGGTTAAAGGAGATCCTGGCCTCTaGGAGGTACGGCGTGTCGCTCTTGGAGCGCACTCT +
Preference number: 6 (lower is better)
Translates to: NACPQVKGDPGL*EVRRVALGAHS
Trigger: AGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCTGGGGGCAGGCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS CCA 72 bp CCAGACCCCCGACCTGCCTCGGCCGTCCCCAATCTCTaGGAGTCTTCTGACTCAGCAAGCCTGTACAGCTGT +
Preference number: 6 (lower is better)
Translates to: PDPRPASAVPNL*ESSDSASLYSC
Trigger: ACAGCTGTACAGGCTTGCTGAGTCAGAAGACTCCCAGAGATTGGGGACGGCCGAGGCAGGTCGGGGGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS CAA 90 bp AGGTTAAAGGAGATCCTGGCCTCTGCGAGGTACGGCGTGTCGCTCTaGGAGCGCACTCTCCGGATGGGCCGCCGGTCTATATCATCCTCC +
Preference number: 6 (lower is better)
Translates to: RLKEILASARYGVSL*ERTLRMGRRSISSS
Trigger: GGAGGATGATATAGACCGGCGGCCCATCCGGAGAGTGCGCTCCAAGAGCGACACGCCGTACCTCGCAGAGGCCAGGATCTCCTTTAACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332995.12
ENST00000379348.3
ENST00000379350.5
ENST00000406205.7
ENST00000674595.1
ENST00000674637.1
ENST00000676159.1
CDS TCA 72 bp TCCAGCACTCCCCTCTGCTTACTTTGTCTGCAGCGGTaGGGCGGGTCCACGGCTTATCTGCCCTGCGGTCAT +
Preference number: 6 (lower is better)
Translates to: SSTPLCLLCLQR*GGSTAYLPCGH
Trigger: ATGACCGCAGGGCAGATAAGCCGTGGACCCGCCTCACCGCTGCAGACAAAGTAAGCAGAGGGGAGTGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS GCA 72 bp TCCCACTCTCCAGCACTCCCCTCTGCTTACTTTGTCTaGAGCGGTGAGGCGGGTCCACGGCTTATCTGCCCT +
Preference number: 6 (lower is better)
Translates to: SHSPALPSAYFV*SGEAGPRLICP
Trigger: AGGGCAGATAAGCCGTGGACCCGCCTCACCGCTGCAGACAAAGTAAGCAGAGGGGAGTGCTGGAGAGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS CCA 72 bp GGTCTATATCATCCTCCGAGGATGCCGCCATTAATGTaGGAGGCAGGAGCAGGGTCGCCCGGCGAGCTTGAG +
Preference number: 6 (lower is better)
Translates to: GLYHPPRMPPLM*EAGAGSPGELE
Trigger: CTCAAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332995.12
ENST00000379348.3
ENST00000379350.5
ENST00000674595.1
ENST00000674637.1
ENST00000676159.1
CDS CCA 72 bp TCCTTCCCAGGTTGGCAAACTTACTTCTCCTGCGGATaGGTGGGGTGTGGGTGCCTGGGACGAGGGAGTCAG +
Preference number: 6 (lower is better)
Translates to: SFPGWQTYFSCG*VGCGCLGRGSQ
Trigger: CTGACTCCCTCGTCCCAGGCACCCACACCCCACCCATCCGCAGGAGAAGTAAGTTTGCCAACCTGGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000406205.7
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CCA 72 bp GGTCTATATCATCCTCCGAGGATGCCGCCATTAATGTaGGAGGCAGGAGCAGGGTCGCCCGGCGAGCTGAGA +
Preference number: 6 (lower is better)
Translates to: GLYHPPRMPPLM*EAGAGSPGELR
Trigger: TCTCAGCTCGCCGGGCGACCCTGCTCCTGCCTCCCACATTAATGGCGGCATCCTCGGAGGATGATATAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406205.7
CDS CCA 72 bp CCAATTCCCTGGCCGCTGACCAGCTCCCACGTGGGATaGAATGGAGAAGGGGAGGGTGTCAACCAAAGTCGG +
Preference number: 6 (lower is better)
Translates to: PIPWPLTSSHVG*NGEGEGVNQSR
Trigger: CCGACTTTGGTTGACACCCTCCCCTTCTCCATTCCATCCCACGTGGGAGCTGGTCAGCGGCCAGGGAATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS CAA 90 bp TGTCTGACGGTTGGAGCACCTCATATGAGCAGGGATCCCTGGGCATaGGGACTGGCTCCATTTCGGACAGGGCAGGCAGAGACAGCTGGC +
Preference number: 6 (lower is better)
Translates to: CLTVGAPHMSRDPWA*GLAPFRTGQAETAG
Trigger: GCCAGCTGTCTCTGCCTGCCCTGTCCGAAATGGAGCCAGTCCCAATGCCCAGGGATCCCTGCTCATATGAGGTGCTCCAACCGTCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000406205.7
ENST00000434977.1
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS TCA 72 bp GGCCGGCTCTCCTCCTCATTACTAGCCTCAGACTTCTaGTCCTACAGGTCCCTTCAGAGCCGTGAAGGCGGG +
Preference number: 6 (lower is better)
Translates to: GRLSSSLLASDF*SYRSLQSREGG
Trigger: CCCGCCTTCACGGCTCTGAAGGGACCTGTAGGATCAGAAGTCTGAGGCTAGTAATGAGGAGGAGAGCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 72 bp CTGACGGTTGGAGCACCTCATATGAGCAGGGATCCCTaGGCATTGGGACTGGCTCCATTTCGGACAGGGCAG +
Preference number: 6 (lower is better)
Translates to: LTVGAPHMSRDP*ALGLAPFRTGQ
Trigger: CTGCCCTGTCCGAAATGGAGCCAGTCCCAATGCCCAGGGATCCCTGCTCATATGAGGTGCTCCAACCGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000406205.7
ENST00000434977.1
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CCA 72 bp CATCACCCGAGTGCAACCCAGAGCTGTGGTAAGAAGTaGAACAGGGGACCCGCTGCTCAGAGCTTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: HHPSATQSCGKK*NRGPAAQSFPA
Trigger: GGCTGGAAAGCTCTGAGCAGCGGGTCCCCTGTTCCACTTCTTACCACAGCTCTGGGTTGCACTCGGGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CCA 72 bp TACTCAGACGTCTCTAAAGTGGCAGCCTCCAGCCGGTaGGGCACAGACTGCCTCTTACCTTCACAGAGCCCC +
Preference number: 6 (lower is better)
Translates to: YSDVSKVAASSR*GTDCLLPSQSP
Trigger: GGGGCTCTGTGAAGGTAAGAGGCAGTCTGTGCCCCACCGGCTGGAGGCTGCCACTTTAGAGACGTCTGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482982.2
ENST00000676234.1
CDS CAA 72 bp GTTTCAGTGGAAATTCCCGGCAAACTCACACTGCGGTaGCATGTGATTTACTGGGCACGGGGCGGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: VSVEIPGKLTLR*HVIYWARGGAG
Trigger: CCCCGCCCCGCCCCGTGCCCAGTAAATCACATGCAACCGCAGTGTGAGTTTGCCGGGAATTTCCACTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CAA 90 bp CGCTGCTCAGAGCTTTCCAGCCTCTGCATGGTCATGGCCAGCGTTTaGTTGAGCTCGTCTATCATTCTGCAGCCCGAGGGGTGCATGGGG +
Preference number: 6 (lower is better)
Translates to: RCSELSSLCMVMASV*LSSSIILQPEGCMG
Trigger: CCCCATGCACCCCTCGGGCTGCAGAATGATAGACGAGCTCAACAAAACGCTGGCCATGACCATGCAGAGGCTGGAAAGCTCTGAGCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS TCA 72 bp AGAACAGTTGGCAGGCACACCAACCCCTCCTGGGTGTaGCCTGCGGGTACTCAGACGTCTCTAAAGTGGCAG +
Preference number: 6 (lower is better)
Translates to: RTVGRHTNPSWV*PAGTQTSLKWQ
Trigger: CTGCCACTTTAGAGACGTCTGAGTACCCGCAGGTCACACCCAGGAGGGGTTGGTGTGCCTGCCAACTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482982.2
ENST00000676234.1
CDS GCA 72 bp GCGGAACCCAGCACCCACCTTCAGCAGACTACGAAATaGCGACCAAGTCACAAGGCCACAGTGAGCACGGTA +
Preference number: 6 (lower is better)
Translates to: AEPSTHLQQTTK*RPSHKATVSTV
Trigger: TACCGTGCTCACTGTGGCCTTGTGACTTGGTCGGCATTTCGTAGTCTGCTGAAGGTGGGTGCTGGGTTCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 72 bp GCGCCAGGATCTGGCCCATCCATGATGTCTGACGGTTaGAGCACCTCATATGAGCAGGGATCCCTGGGCATT +
Preference number: 6 (lower is better)
Translates to: APGSGPSMMSDG*STSYEQGSLGI
Trigger: AATGCCCAGGGATCCCTGCTCATATGAGGTGCTCCAACCGTCAGACATCATGGATGGGCCAGATCCTGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000676159.1
ENST00000676234.1
CDS TCA 72 bp CTCAGACTTCTGATCCTACAGGTCCCTTCAGAGCCGTaGAGGCGGGCATCCTGTGACACAGCTGACACAGCA +
Preference number: 6 (lower is better)
Translates to: LRLLILQVPSEP*RRASCDTADTA
Trigger: TGCTGTGTCAGCTGTGTCACAGGATGCCCGCCTTCACGGCTCTGAAGGGACCTGTAGGATCAGAAGTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS GCA 72 bp GTCATTACAGCTGCCACCGTCAGAGGGTTCATTATGTaGTCAGAGGTGCACAGGGCCTCACTGGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: VITAATVRGFIM*SEVHRASLAAG
Trigger: TCCAGCAGCCAGTGAGGCCCTGTGCACCTCTGAGCACATAATGAACCCTCTGACGGTGGCAGCTGTAATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 72 bp CTGAAGGATCTTGGGACAGGAGGACTCCAGACTCACTaGCAGAGGGACTCTCTTCAGACACTGGCCCATCCA +
Preference number: 6 (lower is better)
Translates to: LKDLGTGGLQTH*QRDSLQTLAHP
Trigger: TGGATGGGCCAGTGTCTGAAGAGAGTCCCTCTGCCAGTGAGTCTGGAGTCCTCCTGTCCCAAGATCCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434977.1
ENST00000675203.1
CDS CCA 72 bp TGTCAACCAAAGTCGGGGGATGGATTCAACTCACCGTaGACTAGGTGGCCACCCATCTGGCATGAAGGGTCC +
Preference number: 6 (lower is better)
Translates to: CQPKSGDGFNSP*TRWPPIWHEGS
Trigger: GGACCCTTCATGCCAGATGGGTGGCCACCTAGTCCACGGTGAGTTGAATCCATCCCCCGACTTTGGTTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS CAA 72 bp CTTTCCAGCCTCTGCATGGTCATGGCCAGCGTTTTGTaGAGCTCGTCTATCATTCTGCAGCCCGAGGGGTGC +
Preference number: 6 (lower is better)
Translates to: LSSLCMVMASVL*SSSIILQPEGC
Trigger: GCACCCCTCGGGCTGCAGAATGATAGACGAGCTCAACAAAACGCTGGCCATGACCATGCAGAGGCTGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CAA 72 bp GAGCTTTCCAGCCTCTGCATGGTCATGGCCAGCGTTTaGTTGAGCTCGTCTATCATTCTGCAGCCCGAGGGG +
Preference number: 6 (lower is better)
Translates to: ELSSLCMVMASV*LSSSIILQPEG
Trigger: CCCCTCGGGCTGCAGAATGATAGACGAGCTCAACAAAACGCTGGCCATGACCATGCAGAGGCTGGAAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS TCA 72 bp TTTCCAGCCTCTGCATGGTCATGGCCAGCGTTTTGTTaGGCTCGTCTATCATTCTGCAGCCCGAGGGGTGCA +
Preference number: 6 (lower is better)
Translates to: FPASAWSWPAFC*ARLSFCSPRGA
Trigger: TGCACCCCTCGGGCTGCAGAATGATAGACGAGCTCAACAAAACGCTGGCCATGACCATGCAGAGGCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS TCA 72 bp CCCAGCTGGCGTCTCCAAGGAGTCCTGCGTTTTACTTaGCATTGGAGGCAACCGGTTGCAGAAACAGGGAAC +
Preference number: 6 (lower is better)
Translates to: PSWRLQGVLRFT*HWRQPVAETGN
Trigger: GTTCCCTGTTTCTGCAACCGGTTGCCTCCAATGTCAAGTAAAACGCAGGACTCCTTGGAGACGCCAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482982.2
ENST00000676234.1
CDS GCA 72 bp AGGCAGTTTTCCTCGAATGAGAGCATCAGACAGGCATaGCCGGGACCAGCTGTGGGAATCCTGAGAGACAGA +
Preference number: 6 (lower is better)
Translates to: RQFSSNESIRQA*PGPAVGILRDR
Trigger: TCTGTCTCTCAGGATTCCCACAGCTGGTCCCGGGCATGCCTGTCTGATGCTCTCATTCGAGGAAAACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 72 bp AGGAGTCCTTCCTGCAGACCTTCATGGCCAGGGAGCTaGTGTATAATGAGCTGTCGTCGTCTTCGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: RSPSCRPSWPGS*CIMSCRRLRPP
Trigger: AGGAGGACGAAGACGACGACAGCTCATTATACACCAGCTCCCTGGCCATGAAGGTCTGCAGGAAGGACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CAA 72 bp GCCCAGCTGGCGTCTCCAAGGAGTCCTGCGTTTTACTaGACATTGGAGGCAACCGGTTGCAGAAACAGGGAA +
Preference number: 6 (lower is better)
Translates to: AQLASPRSPAFY*TLEATGCRNRE
Trigger: TTCCCTGTTTCTGCAACCGGTTGCCTCCAATGTCAAGTAAAACGCAGGACTCCTTGGAGACGCCAGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482982.2
ENST00000676234.1
CDS TCA 72 bp TCAGACAGGCATGCCCGGGACCAGCTGTGGGAATCCTaGGAGACAGACATGAAGCACTTCACTTGGAAATGC +
Preference number: 6 (lower is better)
Translates to: SDRHARDQLWES*ETDMKHFTWKC
Trigger: GCATTTCCAAGTGAAGTGCTTCATGTCTGTCTCTCAGGATTCCCACAGCTGGTCCCGGGCATGCCTGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS TCA 72 bp GGAAGGCTAATCCTGAAAATAACTTCTACTGAGAGTTaGGGAAGTGGCGGCTGGCGTGGGGACGGGAGGCAA +
Preference number: 6 (lower is better)
Translates to: GRLILKITSTES*GSGGWRGDGRQ
Trigger: TTGCCTCCCGTCCCCACGCCAGCCGCCACTTCCTCAACTCTCAGTAGAAGTTATTTTCAGGATTAGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS GCA 72 bp TGGCACTTGTCTTATTTCTGGAAGGCCCATAGGTCCTaGTTTGGTGACCCCATCACCCGAGTGCAACCCAGA +
Preference number: 6 (lower is better)
Translates to: WHLSYFWKAHRS*FGDPITRVQPR
Trigger: TCTGGGTTGCACTCGGGTGATGGGGTCACCAAAGCAGGACCTATGGGCCTTCCAGAAATAAGACAAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS GCA 72 bp CAGGCCAGGAAAGGCCTACGATGTCGTCATTACAGCTaGCACCGTCAGAGGGTTCATTATGTGCTCAGAGGT +
Preference number: 6 (lower is better)
Translates to: QARKGLRCRHYS*HRQRVHYVLRG
Trigger: ACCTCTGAGCACATAATGAACCCTCTGACGGTGGCAGCTGTAATGACGACATCGTAGGCCTTTCCTGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS GCA 72 bp CAGTTCGAGCCCAAGAGGACGCCCAAGAGTTGGCACTaGTGGTCCCATTCTTGCTTCATCCATATCCCCAAA +
Preference number: 6 (lower is better)
Translates to: QFEPKRTPKSWH*WSHSCFIHIPK
Trigger: TTTGGGGATATGGATGAAGCAAGAATGGGACCAGCAGTGCCAACTCTTGGGCGTCCTCTTGGGCTCGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS CCA 72 bp TCTCAGGTGGGAAAACGGATGGAAGAAAAGGTGGTCTaGATGTTGGGTCACCAGGGACAGCTAGAGGGCACA +
Preference number: 6 (lower is better)
Translates to: SQVGKRMEEKVV*MLGHQGQLEGT
Trigger: TGTGCCCTCTAGCTGTCCCTGGTGACCCAACATCCAGACCACCTTTTCTTCCATCCGTTTTCCCACCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 72 bp GGAACACAGTTCGAGCCCAAGAGGACGCCCAAGAGTTaGCACTGCTGGTCCCATTCTTGCTTCATCCATATC +
Preference number: 6 (lower is better)
Translates to: GTQFEPKRTPKS*HCWSHSCFIHI
Trigger: GATATGGATGAAGCAAGAATGGGACCAGCAGTGCCAACTCTTGGGCGTCCTCTTGGGCTCGAACTGTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS CCA 72 bp GATGTAGTGTATGTAGGGGCTGTCTTCAGGAGGCCGTaGTTTTCCAGGGAACACAGTTCGAGCCCAAGAGGA +
Preference number: 6 (lower is better)
Translates to: DVVYVGAVFRRP*FSREHSSSPRG
Trigger: TCCTCTTGGGCTCGAACTGTGTTCCCTGGAAAACCACGGCCTCCTGAAGACAGCCCCTACATACACTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS CCA 72 bp GAGAATTGTCCACCTGTACTGGGGCCTGAGCAGATGTaGGCTGATGTAGTGTATGTAGGGGCTGTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: ENCPPVLGPEQM*ADVVYVGAVFR
Trigger: CCTGAAGACAGCCCCTACATACACTACATCAGCCCACATCTGCTCAGGCCCCAGTACAGGTGGACAATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS CCA 72 bp TCTTCAGACACTGGCCCATCCATGATGTCTGACGGTTaGAGCACCTCATATGAGCAGGGATCCCTGGGCATT +
Preference number: 6 (lower is better)
Translates to: SSDTGPSMMSDG*STSYEQGSLGI
Trigger: AATGCCCAGGGATCCCTGCTCATATGAGGTGCTCCAACCGTCAGACATCATGGATGGGCCAGTGTCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000406205.7
ENST00000434977.1
ENST00000675203.1
CDS CCA 72 bp AAGTCGGGGGATGGATTCAACTCACCGTGGACTAGGTaGCCACCCATCTGGCATGAAGGGTCCATTTTATCC +
Preference number: 6 (lower is better)
Translates to: KSGDGFNSPWTR*PPIWHEGSILS
Trigger: GGATAAAATGGACCCTTCATGCCAGATGGGTGGCCACCTAGTCCACGGTGAGTTGAATCCATCCCCCGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS CAA 72 bp ACTTGTCTTATTTCTGGAAGGCCCATAGGTCCTGCTTaGGTGACCCCATCACCCGAGTGCAACCCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: TCLISGRPIGPA*VTPSPECNPEL
Trigger: CAGCTCTGGGTTGCACTCGGGTGATGGGGTCACCAAAGCAGGACCTATGGGCCTTCCAGAAATAAGACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CAA 72 bp TCTTCCAGCTCTCGCTTGGAGGGCCTGTTGCTGAGTTaGATGGCTAAGGAGTCCTTCCTGCAGACCTTCATG +
Preference number: 6 (lower is better)
Translates to: SSSSRLEGLLLS*MAKESFLQTFM
Trigger: CATGAAGGTCTGCAGGAAGGACTCCTTAGCCATCAAACTCAGCAACAGGCCCTCCAAGCGAGAGCTGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CAA 72 bp GAGGACGCCCAAGAGTTGGCACTGCTGGTCCCATTCTaGCTTCATCCATATCCCCAAAAAGGGAAACGCCTG +
Preference number: 6 (lower is better)
Translates to: EDAQELALLVPF*LHPYPQKGKRL
Trigger: CAGGCGTTTCCCTTTTTGGGGATATGGATGAAGCAAGAATGGGACCAGCAGTGCCAACTCTTGGGCGTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS CAA 72 bp CTCCACTTCCTCAGCTTAAAGGCTGCCCAAAGCTCTTaGCTCCCACATGCATCCGCCTCTCTGGGTCTGTTT +
Preference number: 6 (lower is better)
Translates to: LHFLSLKAAQSS*LPHASASLGLF
Trigger: AAACAGACCCAGAGAGGCGGATGCATGTGGGAGCAAAGAGCTTTGGGCAGCCTTTAAGCTGAGGAAGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676234.1
CDS CAA 90 bp ATGTTCTTTTCTTCCAGCTCTCGCTTGGAGGGCCTGTTGCTGAGTTaGATGGCTAAGGAGTCCTTCCTGCAGACCTTCATGGCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: MFFSSSSRLEGLLLS*MAKESFLQTFMARE
Trigger: CTCCCTGGCCATGAAGGTCTGCAGGAAGGACTCCTTAGCCATCAAACTCAGCAACAGGCCCTCCAAGCGAGAGCTGGAAGAAAAGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CAA 90 bp TCATCCGTCTGCCTGGGAAGGATGTTCTTTTCTTCCAGCTCTCGCTaGGAGGGCCTGTTGCTGAGTTTGATGGCTAAGGAGTCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: SSVCLGRMFFSSSSR*EGLLLSLMAKESFL
Trigger: CAGGAAGGACTCCTTAGCCATCAAACTCAGCAACAGGCCCTCCAAGCGAGAGCTGGAAGAAAAGAACATCCTTCCCAGGCAGACGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS GCA 72 bp CCTATACGGAAGGGCTGTGATGAGCCTGGAGCCTCTTaGCTTCACCTGTCTACACCTATCCAGTGCTATTCT +
Preference number: 6 (lower is better)
Translates to: PIRKGCDEPGAS*LHLSTPIQCYS
Trigger: AGAATAGCACTGGATAGGTGTAGACAGGTGAAGGCAAGAGGCTCCAGGCTCATCACAGCCCTTCCGTATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS CCA 72 bp TTCGAGCCCAAGAGGACGCCCAAGAGTTGGCACTGCTaGTCCCATTCTTGCTTCATCCATATCCCCAAAAAG +
Preference number: 6 (lower is better)
Translates to: FEPKRTPKSWHC*SHSCFIHIPKK
Trigger: CTTTTTGGGGATATGGATGAAGCAAGAATGGGACCAGCAGTGCCAACTCTTGGGCGTCCTCTTGGGCTCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS CCA 72 bp CAAGAAGGTTCTTCCCTAGAGCCTGCAAAAGGACCGTaGCCCCACCAACACCTTGATTTGGGACTTCAAGAC +
Preference number: 6 (lower is better)
Translates to: QEGSSLEPAKGP*PHQHLDLGLQD
Trigger: GTCTTGAAGTCCCAAATCAAGGTGTTGGTGGGGCCACGGTCCTTTTGCAGGCTCTAGGGAAGAACCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS CAA 90 bp GGTTTTCCAGGGAACACAGTTCGAGCCCAAGAGGACGCCCAAGAGTaGGCACTGCTGGTCCCATTCTTGCTTCATCCATATCCCCAAAAA +
Preference number: 6 (lower is better)
Translates to: GFPGNTVRAQEDAQE*ALLVPFLLHPYPQK
Trigger: TTTTTGGGGATATGGATGAAGCAAGAATGGGACCAGCAGTGCCAACTCTTGGGCGTCCTCTTGGGCTCGAACTGTGTTCCCTGGAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS GCA 72 bp CTATTCTCTTTCTCTGGGCACAGCCTCCCAGGCTGCTaGTCCTCCTCCTGTAAAATGGGCACAGTATTATGT +
Preference number: 6 (lower is better)
Translates to: LFSFSGHSLPGC*SSSCKMGTVLC
Trigger: ACATAATACTGTGCCCATTTTACAGGAGGAGGAGCAGCAGCCTGGGAGGCTGTGCCCAGAGAAAGAGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS CAA 72 bp CTGGCGTCTCCAAGGAGTCCTGCGTTTTACTTGACATaGGAGGCAACCGGTTGCAGAAACAGGGAACATTTC +
Preference number: 6 (lower is better)
Translates to: LASPRSPAFYLT*EATGCRNREHF
Trigger: GAAATGTTCCCTGTTTCTGCAACCGGTTGCCTCCAATGTCAAGTAAAACGCAGGACTCCTTGGAGACGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482982.2
ENST00000676234.1
CDS CAA 90 bp GGCTGCTGCTCCTCCTCCTGTAAAATGGGCACAGTATTATGTGCCTaGTGTTTTCTCCGATTCAGCAGCCTTTCCGCAGATTATCTGTGG +
Preference number: 6 (lower is better)
Translates to: GCCSSSCKMGTVLCA*CFLRFSSLSADYLW
Trigger: CCACAGATAATCTGCGGAAAGGCTGCTGAATCGGAGAAAACACAAGGCACATAATACTGTGCCCATTTTACAGGAGGAGGAGCAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS CAA 90 bp TCCTTAGAAGCCCAGCTGGCGTCTCCAAGGAGTCCTGCGTTTTACTaGACATTGGAGGCAACCGGTTGCAGAAACAGGGAACATTTCAAA +
Preference number: 6 (lower is better)
Translates to: SLEAQLASPRSPAFY*TLEATGCRNREHFK
Trigger: TTTGAAATGTTCCCTGTTTCTGCAACCGGTTGCCTCCAATGTCAAGTAAAACGCAGGACTCCTTGGAGACGCCAGCTGGGCTTCTAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482982.2
ENST00000676234.1
CDS TCA 72 bp GGTGAAAATTTACAGAAGCACAGAATACTAGGGCCATaGGGGGACCTAGTGACCACCTCGTCTACCACTCCT +
Preference number: 6 (lower is better)
Translates to: GENLQKHRILGP*GDLVTTSSTTP
Trigger: AGGAGTGGTAGACGAGGTGGTCACTAGGTCCCCTCATGGCCCTAGTATTCTGTGCTTCTGTAAATTTTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS TCA 72 bp ATGTTGGGTCACCAGGGACAGCTAGAGGGCACACGGTaGAAATTTACAGAAGCACAGAATACTAGGGCCATG +
Preference number: 6 (lower is better)
Translates to: MLGHQGQLEGTR*KFTEAQNTRAM
Trigger: CATGGCCCTAGTATTCTGTGCTTCTGTAAATTTTCACCGTGTGCCCTCTAGCTGTCCCTGGTGACCCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 72 bp ATCTCCTATGTGCGTTTCTTAGGTCACTCTGAGGGGTaGGGCCACAAGCTACCACCTACAGAATTGATACCT +
Preference number: 6 (lower is better)
Translates to: ISYVRFLGHSEG*GHKLPPTELIP
Trigger: AGGTATCAATTCTGTAGGTGGTAGCTTGTGGCCCCACCCCTCAGAGTGACCTAAGAAACGCACATAGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CCA 72 bp GTGTCTGTCTGCAGAGAACAATGGCTGCTCTTCTTCTaGTCCTGCTCCTCTTATTTCGGAGGCTTAGAAGAC +
Preference number: 6 (lower is better)
Translates to: VSVCREQWLLFF*SCSSYFGGLED
Trigger: GTCTTCTAAGCCTCCGAAATAAGAGGAGCAGGACCAGAAGAAGAGCAGCCATTGTTCTCTGCAGACAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489548.1
CDS CAA 72 bp GCAGACAGCAAGAACCAGAAGGAGGGAACTCCCATTTaGCGATGTCTCAGGTGGGAAAACGGATGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: ADSKNQKEGTPI*RCLRWENGWKK
Trigger: TTTCTTCCATCCGTTTTCCCACCTGAGACATCGCAAAATGGGAGTTCCCTCCTTCTGGTTCTTGCTGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CAA 90 bp TCCCTAGAGCCTGCAAAAGGACCGTGGCCCCACCAACACCTTGATTaGGGACTTCAAGACTCCAGAACCATCAGAGAGCAAATTGATATT +
Preference number: 6 (lower is better)
Translates to: SLEPAKGPWPHQHLD*GLQDSRTIREQIDI
Trigger: AATATCAATTTGCTCTCTGATGGTTCTGGAGTCTTGAAGTCCCAAATCAAGGTGTTGGTGGGGCCACGGTCCTTTTGCAGGCTCTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS CAA 90 bp GAAGCCCAGCTGGCGTCTCCAAGGAGTCCTGCGTTTTACTTGACATaGGAGGCAACCGGTTGCAGAAACAGGGAACATTTCAAAATGAAA +
Preference number: 6 (lower is better)
Translates to: EAQLASPRSPAFYLT*EATGCRNREHFKMK
Trigger: TTTCATTTTGAAATGTTCCCTGTTTCTGCAACCGGTTGCCTCCAATGTCAAGTAAAACGCAGGACTCCTTGGAGACGCCAGCTGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482982.2
ENST00000676234.1
CDS TCA 72 bp CTTGGGTCATTAATTTCCTCGGCCCTTGCAGATACATaGGACAGTCAGTGGCTGGAGTTCTTGTTCCATCCT +
Preference number: 6 (lower is better)
Translates to: LGSLISSALADT*DSQWLEFLFHP
Trigger: AGGATGGAACAAGAACTCCAGCCACTGACTGTCTCATGTATCTGCAAGGGCCGAGGAAATTAATGACCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379335.8
CDS GCA 72 bp TTTCAACAGGACACGGTAGAGTACAAAACAAAGCAGTaGGACGCTTCTGAGCCCGCAAGCACAAATGAACAG +
Preference number: 6 (lower is better)
Translates to: FQQDTVEYKTKQ*DASEPASTNEQ
Trigger: CTGTTCATTTGTGCTTGCGGGCTCAGAAGCGTCGCACTGCTTTGTTTTGTACTCTACCGTGTCCTGTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332995.12
ENST00000674595.1
ENST00000676159.1
CDS CCA 72 bp CTGCTCCTCTTATTTCGGAGGCTTAGAAGACATGAGTaGCAAAGGCACAGAAATGATACTTCTGTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: LLLLFRRLRRHE*QRHRNDTSVAR
Trigger: CCTGGCCACAGAAGTATCATTTCTGTGCCTTTGCCACTCATGTCTTCTAAGCCTCCGAAATAAGAGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489548.1
CDS CAA 72 bp TCTTTGTTGAGCCTCCCAGACACTGAAGGAGGCTCATaGTGGTATAGTCCTTGTGTCTGGTGCCGTTTCAAA +
Preference number: 6 (lower is better)
Translates to: SLLSLPDTEGGS*WYSPCVWCRFK
Trigger: TTTGAAACGGCACCAGACACAAGGACTATACCACAATGAGCCTCCTTCAGTGTCTGGGAGGCTCAACAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674953.1
CDS CAA 72 bp TTTCTTTGGATAAGACTGGGGCTCACTCATTCTTTGTaGAGCCTCCCAGACACTGAAGGAGGCTCATTGTGG +
Preference number: 6 (lower is better)
Translates to: FLWIRLGLTHSL*SLPDTEGGSLW
Trigger: CCACAATGAGCCTCCTTCAGTGTCTGGGAGGCTCAACAAAGAATGAGTGAGCCCCAGTCTTATCCAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674953.1
CDS CAA 90 bp CCTGCGTTGTTTCAAATTGCTACTGAGCAGGCTGACCTTGTCATTTaGCCTTCTTTACATCACATGGGGTTTCAGGTCTCCAGGCAGAGA +
Preference number: 6 (lower is better)
Translates to: PALFQIATEQADLVI*PSLHHMGFQVSRQR
Trigger: TCTCTGCCTGGAGACCTGAAACCCCATGTGATGTAAAGAAGGCAAAATGACAAGGTCAGCCTGCTCAGTAGCAATTTGAAACAACGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481706.1
CDS CAA 90 bp CTCACTCATTCTTTGTTGAGCCTCCCAGACACTGAAGGAGGCTCATaGTGGTATAGTCCTTGTGTCTGGTGCCGTTTCAAAATGTTCCTC +
Preference number: 6 (lower is better)
Translates to: LTHSLLSLPDTEGGS*WYSPCVWCRFKMFL
Trigger: GAGGAACATTTTGAAACGGCACCAGACACAAGGACTATACCACAATGAGCCTCCTTCAGTGTCTGGGAGGCTCAACAAAGAATGAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674953.1
CDS CCA 72 bp GCATACAGTCCACTGGACTTCCTTTATCAGATAAAATaGCCAGAGCACGTTACCTTAGCAACGGAAGGTGAC +
Preference number: 6 (lower is better)
Translates to: AYSPLDFLYQIK*PEHVTLATEGD
Trigger: GTCACCTTCCGTTGCTAAGGTAACGTGCTCTGGCCATTTTATCTGATAAAGGAAGTCCAGTGGACTGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS CCA 72 bp ACATTCAATCACAACAGTTGGCACTTGTCTTATTTCTaGAAGGCCCATAGGTCCTGCTTTGGTGACCCCATC +
Preference number: 6 (lower is better)
Translates to: TFNHNSWHLSYF*KAHRSCFGDPI
Trigger: GATGGGGTCACCAAAGCAGGACCTATGGGCCTTCCAGAAATAAGACAAGTGCCAACTGTTGTGATTGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CAA 72 bp TCCTCCTCCTGTAAAATGGGCACAGTATTATGTGCCTaGTGTTTTCTCCGATTCAGCAGCCTTTCCGCAGAT +
Preference number: 6 (lower is better)
Translates to: SSSCKMGTVLCA*CFLRFSSLSAD
Trigger: ATCTGCGGAAAGGCTGCTGAATCGGAGAAAACACAAGGCACATAATACTGTGCCCATTTTACAGGAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379329.1
CDS CCA 72 bp AACAATGGGAAGTTTATAATGGCTCAGGTACCAGATTaGGGCCGAAAGGAAGACATCCTACAAGCCAAATGC +
Preference number: 6 (lower is better)
Translates to: NNGKFIMAQVPD*GRKEDILQAKC
Trigger: GCATTTGGCTTGTAGGATGTCTTCCTTTCGGCCCCAATCTGGTACCTGAGCCATTATAAACTTCCCATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CAA 72 bp CAACAATGGGAAGTTTATAATGGCTCAGGTACCAGATaGGGGCCGAAAGGAAGACATCCTACAAGCCAAATG +
Preference number: 6 (lower is better)
Translates to: QQWEVYNGSGTR*GPKGRHPTSQM
Trigger: CATTTGGCTTGTAGGATGTCTTCCTTTCGGCCCCAATCTGGTACCTGAGCCATTATAAACTTCCCATTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CAA 72 bp TTCTCCTTATGGGGATTGCTTTCCAAACTACCTGCGTaGTTTCAAATTGCTACTGAGCAGGCTGACCTTGTC +
Preference number: 6 (lower is better)
Translates to: FSLWGLLSKLPA*FQIATEQADLV
Trigger: GACAAGGTCAGCCTGCTCAGTAGCAATTTGAAACAACGCAGGTAGTTTGGAAAGCAATCCCCATAAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481706.1
CDS TCA 72 bp ACCTTTAGTTCAAAGCCATTGACCAACCCAGGTTCATaGATTTTCAGGCAGAAGGTACCAAGACAACCCCAT +
Preference number: 6 (lower is better)
Translates to: TFSSKPLTNPGS*IFRQKVPRQPH
Trigger: ATGGGGTTGTCTTGGTACCTTCTGCCTGAAAATTCATGAACCTGGGTTGGTCAATGGCTTTGAACTAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS TCA 72 bp CAGTTGCTGCAAATGTGTTTGATCTCCTTGCCTAGTTaGCAGTGGATCACAAAGGACACGTTGTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: QLLQMCLISLPS*QWITKDTLLLL
Trigger: CAACAACAACAACGTGTCCTTTGTGATCCACTGTCAACTAGGCAAGGAGATCAAACACATTTGCAGCAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675203.1
CDS CAA 72 bp AGCGGTAAAACAAGAGCCGTTCCAGCCAGAGTGTCTTaGATCTTGCTAAATATTCCCGGTGAAAGTAAACGA +
Preference number: 6 (lower is better)
Translates to: SGKTRAVPARVS*ILLNIPGESKR
Trigger: TCGTTTACTTTCACCGGGAATATTTAGCAAGATCAAAGACACTCTGGCTGGAACGGCTCTTGTTTTACCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332995.12
CDS CAA 90 bp CACATTTTCTTTATTGTCATCACATTCAATCACAACAGTTGGCACTaGTCTTATTTCTGGAAGGCCCATAGGTCCTGCTTTGGTGACCCC +
Preference number: 6 (lower is better)
Translates to: HIFFIVITFNHNSWH*SYFWKAHRSCFGDP
Trigger: GGGGTCACCAAAGCAGGACCTATGGGCCTTCCAGAAATAAGACAAGTGCCAACTGTTGTGATTGAATGTGATGACAATAAAGAAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS GCA 72 bp CAAAGGGATGAGGGATTTTTATCAACAGCAGCCAGCTaGAATGCAAAGTCATGCTTTCTAGTCTCAGTTCAA +
Preference number: 6 (lower is better)
Translates to: QRDEGFLSTAAS*NAKSCFLVSVQ
Trigger: TTGAACTGAGACTAGAAAGCATGACTTTGCATTGCAGCTGGCTGCTGTTGATAAAAATCCCTCATCCCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS TCA 72 bp TTAGAAGTGTGTTGTGGGGTAGGGGGAACAGGGTCATaGATTAAGCCAGAAATATTTGTTCACTATCTTGAG +
Preference number: 6 (lower is better)
Translates to: LEVCCGVGGTGS*IKPEIFVHYLE
Trigger: CTCAAGATAGTGAACAAATATTTCTGGCTTAATTCATGACCCTGTTCCCCCTACCCCACAACACACTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS GCA 72 bp TTTTTATCAACAGCAGCCAGCTGCAATGCAAAGTCATaGTTTCTAGTCTCAGTTCAAATGGACATTTCCCTT +
Preference number: 6 (lower is better)
Translates to: FLSTAASCNAKS*FLVSVQMDISL
Trigger: AAGGGAAATGTCCATTTGAACTGAGACTAGAAAGCATGACTTTGCATTGCAGCTGGCTGCTGTTGATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379350.5
CDS CAA 72 bp TTTATTGTCATCACATTCAATCACAACAGTTGGCACTaGTCTTATTTCTGGAAGGCCCATAGGTCCTGCTTT +
Preference number: 6 (lower is better)
Translates to: FIVITFNHNSWH*SYFWKAHRSCF
Trigger: AAAGCAGGACCTATGGGCCTTCCAGAAATAAGACAAGTGCCAACTGTTGTGATTGAATGTGATGACAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS CCA 72 bp ATTTTCTTTATTGTCATCACATTCAATCACAACAGTTaGCACTTGTCTTATTTCTGGAAGGCCCATAGGTCC +
Preference number: 6 (lower is better)
Translates to: IFFIVITFNHNS*HLSYFWKAHRS
Trigger: GGACCTATGGGCCTTCCAGAAATAAGACAAGTGCCAACTGTTGTGATTGAATGTGATGACAATAAAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000332995.12
ENST00000379350.5
ENST00000482982.2
ENST00000674595.1
ENST00000674637.1
ENST00000674953.1
ENST00000675203.1
ENST00000676159.1
ENST00000676234.1
CDS TCA 72 bp GGGACTTCAAGACTCCAGAACCATCAGAGAGCAAATTaGTATTGTTTTATGTCATGTAGTTTGTGGTACTTT +
Preference number: 6 (lower is better)
Translates to: GTSRLQNHQRAN*YCFMSCSLWYF
Trigger: AAAGTACCACAAACTACATGACATAAAACAATATCAATTTGCTCTCTGATGGTTCTGGAGTCTTGAAGTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379348.3
CDS TCA 72 bp CTTAATACTAACCTTGTTAAGTGTCTACTCAATTCATaGACTTCCATCTCAGTGCTTTTGAATTCATTGAGC +
Preference number: 6 (lower is better)
Translates to: LNTNLVKCLLNS*TSISVLLNSLS
Trigger: GCTCAATGAATTCAAAAGCACTGAGATGGAAGTTCATGAATTGAGTAGACACTTAACAAGGTTAGTATTAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674595.1