RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000087157

Ensembl transcript IDs: ENST00000262764.11, ENST00000585521.2, ENST00000586019.1, ENST00000586325.5, ENST00000586355.1, ENST00000586510.6, ENST00000586880.1, ENST00000587356.1, ENST00000588169.5, ENST00000588281.5, ENST00000589425.5, ENST00000589426.5, ENST00000589689.5, ENST00000591996.1, ENST00000592043.5

Found 561 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGCTCAGGGATGAGGAGCCGAAGCAGCCCACGGAGGTGCGGCGTGTaGAAGAGGGAGACTCGGACCTGCTCTGGGAACCTCCGCAGGAGT +
Preference number: 1 (lower is better)
Translates to: RSGMRSRSSPRRCGV*KRETRTCSGNLRRS
Trigger: ACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCTCCCTCTTTCACACGCCGCACCTCCGTGGGCTGCTTCGGCTCCTCATCCCTGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR TCA 90 bp GGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTaGGGCCAGCAGGATCTGGTACTCAGCCCGAGTGCCCAAGACCAG +
Preference number: 1 (lower is better)
Translates to: GAGHPLGPKEAIHLW*GQQDLVLSPSAQDQ
Trigger: CTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR TCA 90 bp CAGAGGCCTTTGGCGTGGAACGTCCAGCCCCTCCGCCAGTACTCCTaGAGCTGGACCCGCTCCTGCTGTCCCAGGCTGCACACCTCACTG +
Preference number: 1 (lower is better)
Translates to: QRPLAWNVQPLRQYS*SWTRSCCPRLHTSL
Trigger: CAGTGAGGTGTGCAGCCTGGGACAGCAGGAGCGGGTCCAGCTTCAGGAGTACTGGCGGAGGGGCTGGACGTTCCACGCCAAAGGCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 90 bp TGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTaGCCTGAAGCCTTTTGGGGTAGAGCCCAGCTCTGCAGAGGGCGG +
Preference number: 1 (lower is better)
Translates to: CRPSPTKASASSRGS*PEAFWGRAQLCRGR
Trigger: CCGCCCTCTGCAGAGCTGGGCTCTACCCCAAAAGGCTTCAGGCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR CCA 90 bp GCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTaGCCCCAAAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCT +
Preference number: 1 (lower is better)
Translates to: ARCAHRPLGWRRPPP*PQRSHSPLVRPAGS
Trigger: AGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR TCA 90 bp CCTGCAGCTGCAGGGACACATCCCCCACCGCGTCCACCAGCTCCGTaGAGAAGTCGGCAATCTCCGCACAGTCCCGCTCAAGATGACGCT +
Preference number: 1 (lower is better)
Translates to: PAAAGTHPPPRPPAP*RSRQSPHSPAQDDA
Trigger: AGCGTCATCTTGAGCGGGACTGTGCGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACGCGGTGGGGGATGTGTCCCTGCAGCTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR TCA 90 bp CCTGCAGCTGCAGGGACACATCCCCCACCGCGTCCACCAGCTCCGTaGAGAAGTCGGCAATCTCCGCACAGTCCTGCAGGAACACGTAGC +
Preference number: 1 (lower is better)
Translates to: PAAAGTHPPPRPPAP*RSRQSPHSPAGTRS
Trigger: GCTACGTGTTCCTGCAGGACTGTGCGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACGCGGTGGGGGATGTGTCCCTGCAGCTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588169.5
3UTR CCA 90 bp CCCACGGAGGTGCGGCGTGTGAAAGAGGGAGACTCGGACCTGCTCTaGGAACCTCCGCAGGAGTGGGAGCAGCATTGTGCGGGAGTTCTT +
Preference number: 1 (lower is better)
Translates to: PTEVRRVKEGDSDLL*EPPQEWEQHCAGVL
Trigger: AAGAACTCCCGCACAATGCTGCTCCCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCTCCCTCTTTCACACGCCGCACCTCCGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 90 bp GCACACCTCACTGAAGAACTGTCGCTCGATGTGCACATAGGCCGCTaGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCAC +
Preference number: 1 (lower is better)
Translates to: AHLTEELSLDVHIGR*DGAGHPLGPKEAIH
Trigger: GTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGACAGTTCTTCAGTGAGGTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR GCA 90 bp TGCGATCCCCAGCAGCTGCTGCATCTTCCTGGGTCAAAAGAGAGTTaGTGTGGAAGGTCTGGGCATGCAGCATCTGCTGGCGGGTCCTGG +
Preference number: 1 (lower is better)
Translates to: CDPQQLLHLPGSKES*CGRSGHAASAGGSW
Trigger: CCAGGACCCGCCAGCAGATGCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTTGACCCAGGAAGATGCAGCAGCTGCTGGGGATCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 90 bp TCCCCAGCAGCTGCTGCATCTTCCTGGGTCAAAAGAGAGTTGCTGTaGAAGGTCTGGGCATGCAGCATCTGCTGGCGGGTCCTGGCTGAG +
Preference number: 1 (lower is better)
Translates to: SPAAAASSWVKRELL*KVWACSICWRVLAE
Trigger: CTCAGCCAGGACCCGCCAGCAGATGCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTTGACCCAGGAAGATGCAGCAGCTGCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR GCA 90 bp GTAGGCCTGGGTCAGGTTGAAATAGCCAGTGGTGAGGTAGACCTTTaGCCCGCGCTCCGCCTCAGTCAACAGGGTCTCAGTGACAATCTC +
Preference number: 1 (lower is better)
Translates to: VGLGQVEIASGEVDL*PALRLSQQGLSDNL
Trigger: GAGATTGTCACTGAGACCCTGTTGACTGAGGCGGAGCGCGGGGCAAAGGTCTACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR TCA 90 bp GTTCTCCGTCACGATCGCAATCTGGGCCTCCAGGTCCCGGTGAACTaGCCTGTACCCAAAATTAGGAGAGCCAATCAGCGTGAGACAGGG +
Preference number: 1 (lower is better)
Translates to: VLRHDRNLGLQVPVN*PVPKIRRANQRETG
Trigger: CCCTGTCTCACGCTGATTGGCTCTCCTAATTTTGGGTACAGGTCAGTTCACCGGGACCTGGAGGCCCAGATTGCGATCGTGACGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR TCA 90 bp GCCTGGTTCTCCGTCACGATCGCAATCTGGGCCTCCAGGTCCCGGTaGACTGACCTGTACCCAAAATTAGGAGAGCCAATCAGCGTGAGA +
Preference number: 1 (lower is better)
Translates to: AWFSVTIAIWASRSR*TDLYPKLGEPISVR
Trigger: TCTCACGCTGATTGGCTCTCCTAATTTTGGGTACAGGTCAGTTCACCGGGACCTGGAGGCCCAGATTGCGATCGTGACGGAGAACCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR GCA 90 bp GTCCCGCTCAAGATGACGCTGTTGTCGAAGAGGTACACCTTAATGTaGTGGAGGCCGATGGTCTCGTTGAAGCGCTCAGGGATGAGGAGC +
Preference number: 1 (lower is better)
Translates to: VPLKMTLLSKRYTLM*WRPMVSLKRSGMRS
Trigger: GCTCCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAACAGCGTCATCTTGAGCGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR GCA 90 bp GCACCGCTCAAGATGACGCTGTTGTCGAAGAGGTACACCTTAATGTaGTGGAGGCCGATGGTCTCGTTGAAGCGCTCAGGGATGAGGAGC +
Preference number: 1 (lower is better)
Translates to: APLKMTLLSKRYTLM*WRPMVSLKRSGMRS
Trigger: GCTCCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAACAGCGTCATCTTGAGCGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588169.5
3UTR CCA 90 bp CCGCTCAAGATGACGCTGTTGTCGAAGAGGTACACCTTAATGTGCTaGAGGCCGATGGTCTCGTTGAAGCGCTCAGGGATGAGGAGCCGA +
Preference number: 1 (lower is better)
Translates to: PLKMTLLSKRYTLMC*RPMVSLKRSGMRSR
Trigger: TCGGCTCCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAACAGCGTCATCTTGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 90 bp GCTGCTGCATCTTCCTGGGTCAAAAGAGAGTTGCTGTGGAAGGTCTaGGCATGCAGCATCTGCTGGCGGGTCCTGGCTGAGTTGATCACA +
Preference number: 1 (lower is better)
Translates to: AAASSWVKRELLWKV*ACSICWRVLAELIT
Trigger: TGTGATCAACTCAGCCAGGACCCGCCAGCAGATGCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTTGACCCAGGAAGATGCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR GCA 90 bp GCATCTTCCTGGGTCAAAAGAGAGTTGCTGTGGAAGGTCTGGGCATaGAGCATCTGCTGGCGGGTCCTGGCTGAGTTGATCACATCCATG +
Preference number: 1 (lower is better)
Translates to: ASSWVKRELLWKVWA*SICWRVLAELITSM
Trigger: CATGGATGTGATCAACTCAGCCAGGACCCGCCAGCAGATGCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTTGACCCAGGAAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR TCA 90 bp GGTAGACCTTTGCCCCGCGCTCCGCCTCAGTCAACAGGGTCTCAGTaGCAATCTCATCGATTTGAATCTCGAAGGGCTTCATCTGAATCA +
Preference number: 1 (lower is better)
Translates to: GRPLPRAPPQSTGSQ*QSHRFESRRASSES
Trigger: TGATTCAGATGAAGCCCTTCGAGATTCAAATCGATGAGATTGTCACTGAGACCCTGTTGACTGAGGCGGAGCGCGGGGCAAAGGTCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 90 bp AAGTCTAAGAGAATGGAGACCTTGAGATTTGAAGGAAACTTTGCTTaGAGTGACTTTTCTAGAGTACTTTCCAGGCAGTCCACCAGCTCC +
Preference number: 1 (lower is better)
Translates to: KSKRMETLRFEGNFA*SDFSRVLSRQSTSS
Trigger: GGAGCTGGTGGACTGCCTGGAAAGTACTCTAGAAAAGTCACTCCAAGCAAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCTTAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR CCA 90 bp AAGTCTAAGAGAATGGAGACCTTGAGATTTGAAGGAAACTTTGCTTaGAGTGACTTTTCTAGAGTACTTTCCAGGCAGTCCACCTTCATG +
Preference number: 1 (lower is better)
Translates to: KSKRMETLRFEGNFA*SDFSRVLSRQSTFM
Trigger: CATGAAGGTGGACTGCCTGGAAAGTACTCTAGAAAAGTCACTCCAAGCAAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCTTAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588169.5
3UTR-3UTR TCA 90 bp TCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGCCCCCGTCCACCAGCTCCGTaGAGAAGTCGGCAATCTCCG +
Preference number: 2 (lower is better)
Translates to: SLDVHIGRWDGAGHPLGPRPPAP*RSRQSP
Trigger: CGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACG...GGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp CCAGGTACAGCCAGAGGCCTTTGGCGTGGAACGTCCAGCCCCTCCGCCAGTACTCTCCGCCAGTACTCCTaGAGCTGGACCCGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: PGTARGLWRGTSSPSASTLRQYS*SWTRSC
Trigger: GCAGGAGCGGGTCCAGCTTCAGGAGTACTGGCGGAG...AGTACTGGCGGAGGGGCTGGACGTTCCACGCCAAAGGCCTCTGGCTGTACCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp ACTGTCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGCCCCAGGTAGAGGGATaGCATCACGACCCGCCTCTT +
Preference number: 2 (lower is better)
Translates to: TVARCAHRPLGWRRPPPWPQVEG*HHDPPL
Trigger: AAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGG...CCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGACAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR-3UTR GCA 90 bp ATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACACCGTGTCGTCCCCCTaGAGCTGCAGGGACACATCC +
Preference number: 2 (lower is better)
Translates to: IGRWDGAGHPLGPKEAIHTVSSP*SCRDTS
Trigger: GGATGTGTCCCTGCAGCTGCAGGGGGACGACACGGT...GTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp GACAGGGCAGGCTGCTCCCTGCCAGGTACAGCCAGAGGCCTTTGGCGTGGAACGGGTGAGGTAGACCTTTaGCCCGCGCTCCGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: DRAGCSLPGTARGLWRGTGEVDL*PALRLS
Trigger: ACTGAGGCGGAGCGCGGGGCAAAGGTCTACCTCACC...CGTTCCACGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CCA 90 bp ATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACGAGGCCAGCAGGATCTaGTACTCAGCCCGAGTGCCC +
Preference number: 2 (lower is better)
Translates to: IGRWDGAGHPLGPKEAIHEASRI*YSARVP
Trigger: GGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTC...GTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp GGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGCGTCCACCAGCTCCGTaGAGAAGTCGGCAATCTCCG +
Preference number: 2 (lower is better)
Translates to: GMAPATPLAPKKPFTSGERPPAP*RSRQSP
Trigger: CGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACG...CTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp TCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGCCCCAGGTACACCTTAATGTaGTGGAGGCCGATGGTCTCG +
Preference number: 2 (lower is better)
Translates to: SLDVHIGRWDGAGHPLGPRYTLM*WRPMVS
Trigger: CGAGACCATCGGCCTCCAGCACATTAAGGTGTACCT...GGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp GTGAAGCTGCTGCTGCAGGGCCTGGTTCTCCGTCACGATCGCAATCTGGGCCTCAGCTGGACCCGCTCCTaGTGTCCCAGGCTGCACACC +
Preference number: 2 (lower is better)
Translates to: VKLLLQGLVLRHDRNLGLSWTRS*CPRLHT
Trigger: GGTGTGCAGCCTGGGACAGCAGGAGCGGGTCCAGCT...GAGGCCCAGATTGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCAGCTTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CCA 90 bp CTCACTGAAGAACTGTCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCCCAGGTGTCAGGGGCTaGTCTGCGATCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: LTEELSLDVHIGRWDGAGPGVRG*SAIPSS
Trigger: GCTGCTGGGGATCGCAGACCAGCCCCTGACACCTGG...GCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGACAGTTCTTCAGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp GGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGACTGGAGTCATCGCTaGAGCGCGGCTGAAAGAGCT +
Preference number: 2 (lower is better)
Translates to: GMAPATPLAPKKPFTSGEDWSHR*SAAERA
Trigger: AGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTC...CTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp CCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTGGTCGGAGGTGCGGCGTGTaGAAGAGGGAGACTCGGACC +
Preference number: 2 (lower is better)
Translates to: PPWPQRSHSPLVRPAGSGRRCGV*KRETRT
Trigger: GGTCCGAGTCTCCCTCTTTCACACGCCGCACCTCCG...ACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp GACAGGGCAGGCTGCTCCCTGCCAGGTACAGCCAGAGGCCTTTGGCGTGGAACGTCTTATTGGCTGCCTTaGAGTACTCGGCCCGGTCCC +
Preference number: 2 (lower is better)
Translates to: DRAGCSLPGTARGLWRGTSYWLP*STRPGP
Trigger: GGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGA...CGTTCCACGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp CGTGAGACAGGGCAGGCTGCTCCCTGCCAGGTACAGCCAGAGGCCTTTGGCGTGTCTTATTGGCTGCCTTaGAGTACTCGGCCCGGTCCC +
Preference number: 2 (lower is better)
Translates to: RETGQAAPCQVQPEAFGVSYWLP*STRPGP
Trigger: GGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGA...CACGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGTCTCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp TCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGCCCCGGGTCAAAAGAGAGTTaGTGTGGAAGGTCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: SLDVHIGRWDGAGHPLGPGSKES*CGRSGH
Trigger: ATGCCCAGACCTTCCACAGCAACTCTCTTTTGACCC...GGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp GCTGCAGGGCCTGGTTCTCCGTCACGATCGCAATCTGGGCCTCCAGGTCCCGGTGGCTGCACACCTCACTaGAGAACTGTCGCTCGATGT +
Preference number: 2 (lower is better)
Translates to: AAGPGSPSRSQSGPPGPGGCTPH*RTVARC
Trigger: ACATCGAGCGACAGTTCTTCAGTGAGGTGTGCAGCC...ACCGGGACCTGGAGGCCCAGATTGCGATCGTGACGGAGAACCAGGCCCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp CCAGCAGGATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCATGTAGGCCTCAGCCATACTGTCCCTaGAGGGGCTCGCTGGGACAC +
Preference number: 2 (lower is better)
Translates to: PAGSGTQPECPRPGPCRPQPYCP*RGSLGH
Trigger: GTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTG...AGGCCTACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR-3UTR GCA 90 bp GGCCCGGTCCCCTTTGTAAGGATGCACCATCCCATCCACCACCTGCACCGTGTCGTGGGAGCAGCATTGTaGGGGAGTTCTTCCGGCCTC +
Preference number: 2 (lower is better)
Translates to: GPVPFVRMHHPIHHLHRVVGAAL*GSSSGL
Trigger: GAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCAC...GACACGGTGCAGGTGGTGGATGGGATGGTGCATCCTTACAAAGGGGACCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp GATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCATGTAGGCCTGGGTCAGAGGGAGACTCGGACCTaGTCTGGGAACCTCCGCAGG +
Preference number: 2 (lower is better)
Translates to: DLVLSPSAQDQVHVGLGQRETRT*SGNLRR
Trigger: CCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCTCCCT...CTGACCCAGGCCTACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CCA 90 bp CGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCCCTGCAGGGGCTCGCTaGGACACCCAGACTGGAGTC +
Preference number: 2 (lower is better)
Translates to: RDGVVTTCRPSPTKASASPAGAR*DTQTGV
Trigger: GACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGG...GGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR-3UTR CCA 90 bp CTTAATGTGCTGGAGGCCGATGGTCTCGTTGAAGCGCTCAGGGATGAGGAGCCGCCTGCAGGGGCTCGCTaGGACACCCAGACTGGAGTC +
Preference number: 2 (lower is better)
Translates to: LNVLEADGLVEALRDEEPPAGAR*DTQTGV
Trigger: GACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGG...CGGCTCCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCTCCAGCACATTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR-3UTR CCA 90 bp GCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCTGAAGTGGCCTGAAGCCTTTTaGGGTAGAGCCCAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: AGHHLRRPLLPAVAAGLKWPEAF*GRAQLC
Trigger: GCAGAGCTGGGCTCTACCCCAAAAGGCTTCAGGCCA...CTTCAGGCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR-3UTR CCA 90 bp ATCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACGACTCGGACCTGCTCTaGGAACCTCCGCAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: IFTHSFTWRLGCSKVAEDDSDLL*EPPQEW
Trigger: CCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTC...GTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp CTCACTGAAGAACTGTCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCGACTGGAGTCATCGCTaGAGCGCGGCTGAAAGAGCT +
Preference number: 2 (lower is better)
Translates to: LTEELSLDVHIGRWDGAGDWSHR*SAAERA
Trigger: AGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTC...GCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGACAGTTCTTCAGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp CCCCACCGCGTCCACCAGCTCCGTGAAGAAGTCGGCAATCTCCGCACAGTCCTGCTCGTGAGCCCCGCGTaGAGTCTAAGAGAATGGAGA +
Preference number: 2 (lower is better)
Translates to: PHRVHQLREEVGNLRTVLLVSPA*SLREWR
Trigger: TCTCCATTCTCTTAGACTTCACGCGGGGCTCACGAG...CAGGACTGTGCGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACGCGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588169.5
3UTR-3UTR TCA 90 bp AAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTGGTACTCAGCCCGAGTGCGGAGGTGCGGCGTGTaGAAGAGGGAGACTCGGACC +
Preference number: 2 (lower is better)
Translates to: KKPFTSGEASRIWYSARVRRCGV*KRETRT
Trigger: GGTCCGAGTCTCCCTCTTTCACACGCCGCACCTCCG...CACTCGGGCTGAGTACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp GACCCTCTTATTGGCTGCCTTGCAGTACTCGGCCCGGTCCCCTTTGTAAGGATGTCGTCCCCCTGCAGCTaGAGGGACACATCCCCCACC +
Preference number: 2 (lower is better)
Translates to: DPLIGCLAVLGPVPFVRMSSPCS*RDTSPT
Trigger: GGTGGGGGATGTGTCCCTGCAGCTGCAGGGGGACGA...CATCCTTACAAAGGGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp GAAAGAGGGAGACTCGGACCTGCTCTGGGAACCTCCGCAGGAGTGGGAGCAGCACTCGTGAGCCCCGCGTaGAGTCTAAGAGAATGGAGA +
Preference number: 2 (lower is better)
Translates to: ERGRLGPALGTSAGVGAALVSPA*SLREWR
Trigger: TCTCCATTCTCTTAGACTTCACGCGGGGCTCACGAG...TGCTGCTCCCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCTCCCTCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp ATCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACGCCATTCACCTCTGGTaGGGCCAGCAGGATCTGGTA +
Preference number: 2 (lower is better)
Translates to: IFTHSFTWRLGCSKVAEDAIHLW*GQQDLV
Trigger: TACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGC...GTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp CGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCACCTACGAAGGCCTCTaGTTCCAGCCGTGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: RDGVVTTCRPSPTKASASTYEGL*FQPWQL
Trigger: CAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGT...GGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR-3UTR GCA 90 bp CCAGCAGGATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCATGTAGGCCTGACCCTCTTATTGGCTaGCTTGCAGTACTCGGCCCG +
Preference number: 2 (lower is better)
Translates to: PAGSGTQPECPRPGPCRPDPLIG*LAVLGP
Trigger: CGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTC...AGGCCTACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp TCCTTGAGCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGTGAGGTAGACCTTTaGCCCGCGCTCCGCCTCAGT +
Preference number: 2 (lower is better)
Translates to: SLSPAGRGSYNMQAITYEGEVDL*PALRLS
Trigger: ACTGAGGCGGAGCGCGGGGCAAAGGTCTACCTCACC...TTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGCTCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR-3UTR CCA 90 bp TTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTTCCTTGAGCCCAGCGGGGACTCGGACCTGCTCTaGGAACCTCCGCAGGAGTGG +
Preference number: 2 (lower is better)
Translates to: LNGWNPRALAELFLEPSGDSDLL*EPPQEW
Trigger: CCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTC...CCCGCTGGGCTCAAGGAACAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR-3UTR CCA 90 bp CGTGAGACAGGGCAGGCTGCTCCCTGCCAGGTACAGCCAGAGGCCTTTGGCGTGGCTGCTGCATCTTCCTaGGTCAAAAGAGAGTTGCTG +
Preference number: 2 (lower is better)
Translates to: RETGQAAPCQVQPEAFGVAAASS*VKRELL
Trigger: CAGCAACTCTCTTTTGACCCAGGAAGATGCAGCAGC...CACGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGTCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CCA 90 bp TCCTTGAGCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAACGCCGGCCACCCCCTTaGCCCCAAAGAAGCCATTCA +
Preference number: 2 (lower is better)
Translates to: SLSPAGRGSYNMQAITYERRPPP*PQRSHS
Trigger: TGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCG...TTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGCTCAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR CAA 90 bp TTGTCGAAGAGGTACACCTTAATGTGCTGGAGGCCGATGGTCTCGTaGAAGCGCTCAGGGATGAGGAGCCGAAGCAGCCCACGGAGGTGC +
Preference number: 2 (lower is better)
Translates to: LSKRYTLMCWRPMVS*KRSGMRSRSSPRRC
Trigger: GCACCTCCGTGGGCTGCTTCGGCTCCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp CGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCGACTGGAGTCATCGCTaGAGCGCGGCTGAAAGAGCT +
Preference number: 2 (lower is better)
Translates to: RDGVVTTCRPSPTKASASDWSHR*SAAERA
Trigger: AGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTC...GGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR-3UTR TCA 90 bp GCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTTCCTTGAGAGAGGGCGGGGAGTGTaGGGACCCCACCCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: ATDLNGWNPRALAELFLERGRGV*GPHPSC
Trigger: GCAGGAAGGGTGGGGTCCTCACACTCCCCGCCCTCT...CTCAAGGAACAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR-3UTR TCA 90 bp CAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCAGGTCCCGGTGAACTaGCCTGTACCCAAAATTAGG +
Preference number: 2 (lower is better)
Translates to: QHAGHHLRRPLLPAVAAGQVPVN*PVPKIR
Trigger: CCTAATTTTGGGTACAGGTCAGTTCACCGGGACCTG...GCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR-3UTR GCA 90 bp TCCTTGAGCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAACCTACGAAGGCCTCTaGTTCCAGCCGTGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: SLSPAGRGSYNMQAITYETYEGL*FQPWQL
Trigger: CAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGT...TTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGCTCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR-3UTR GCA 90 bp ACATCCATGACCCTCTTATTGGCTGCCTTGCAGTACTCGGCCCGGTCCCCTTTGGTGGGAGCAGCATTGTaGGGGAGTTCTTCCGGCCTC +
Preference number: 2 (lower is better)
Translates to: TSMTLLLAALQYSARSPLVGAAL*GSSSGL
Trigger: GAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCAC...CAAAGGGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTCATGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp CCGCTCAAGATGACGCTGTTGTCGAAGAGGTACACCTTAATGTGCTGGAGGCCGAGGGAGACTCGGACCTaGTCTGGGAACCTCCGCAGG +
Preference number: 2 (lower is better)
Translates to: PLKMTLLSKRYTLMCWRPRETRT*SGNLRR
Trigger: CCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCTCCCT...CGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAACAGCGTCATCTTGAGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CCA 90 bp CAGGTCCATGTAGGCCTGGGTCAGGTTGAAATAGCCAGTGGTGAGGTAGACCTTCCAGGTGTCAGGGGCTaGTCTGCGATCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: QVHVGLGQVEIASGEVDLPGVRG*SAIPSS
Trigger: GCTGCTGGGGATCGCAGACCAGCCCCTGACACCTGG...AAGGTCTACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTACATGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp GATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCATGTAGGCCTGGGTCAGTTGCACCGCTCAAGATaGCGCTGTTGTCGAAGAGGT +
Preference number: 2 (lower is better)
Translates to: DLVLSPSAQDQVHVGLGQLHRSR*RCCRRG
Trigger: ACCTCTTCGACAACAGCGTCATCTTGAGCGGTGCAA...CTGACCCAGGCCTACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588169.5
3UTR-3UTR TCA 90 bp GACCCTCTTATTGGCTGCCTTGCAGTACTCGGCCCGGTCCCCTTTGTAAGGATGGGTCCTGGCGGTTGGTaGAGTAGGAGTCACTCAGGT +
Preference number: 2 (lower is better)
Translates to: DPLIGCLAVLGPVPFVRMGPGGW*SRSHSG
Trigger: ACCTGAGTGACTCCTACTTCACCAACCGCCAGGACC...CATCCTTACAAAGGGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588169.5
3UTR-3UTR CCA 90 bp GTGAAGCTGCTGCTGCAGGGCCTGGTTCTCCGTCACGATCGCAATCTGGGCCTCAAAAGAGAGTTGCTGTaGAAGGTCTGGGCATGCAGC +
Preference number: 2 (lower is better)
Translates to: VKLLLQGLVLRHDRNLGLKRELL*KVWACS
Trigger: GCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTT...GAGGCCCAGATTGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCAGCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp TTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTGGTACTCAGGTACTCAGCCCGAGTaGCCAAGACCAGGTCCATGT +
Preference number: 2 (lower is better)
Translates to: LAPKKPFTSGEASRIWYSGTQPE*PRPGPC
Trigger: ACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACC...TGAGTACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CCA 90 bp CCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTGGTTACACCTTAATGTGCTaGAGGCCGATGGTCTCGTTG +
Preference number: 2 (lower is better)
Translates to: PPWPQRSHSPLVRPAGSGYTLMC*RPMVSL
Trigger: CAACGAGACCATCGGCCTCCAGCACATTAAGGTGTA...ACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp GGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGAGAGAATGGAGACCTTaGGATTTGAAGGAAACTTTG +
Preference number: 2 (lower is better)
Translates to: GMAPATPLAPKKPFTSGEREWRP*DLKETL
Trigger: CAAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCT...CTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp CAAGACCAGGTCCATGTAGGCCTGGGTCAGGTTGAAATAGCCAGTGGTGAGGTACTGGCGGGTCCTGGCTaGGTTGATCACATCCATGAC +
Preference number: 2 (lower is better)
Translates to: QDQVHVGLGQVEIASGEVLAGPG*VDHIHD
Trigger: GTCATGGATGTGATCAACTCAGCCAGGACCCGCCAG...TACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTACATGGACCTGGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CCA 90 bp TCTGAAAATGCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGCCTGCAGGGGCTCGCTaGGACACCCAGACTGGAGTC +
Preference number: 2 (lower is better)
Translates to: SENATDLNGWNPRALAELPAGAR*DTQTGV
Trigger: GACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGG...CAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGCATTTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR-3UTR TCA 90 bp CAGGTCCATGTAGGCCTGGGTCAGGTTGAAATAGCCAGTGGTGAGGTAGACCTTCAGTCCCGCTCAAGATaGCGCTGTTGTCGAAGAGGT +
Preference number: 2 (lower is better)
Translates to: QVHVGLGQVEIASGEVDLQSRSR*RCCRRG
Trigger: ACCTCTTCGACAACAGCGTCATCTTGAGCGGGACTG...AAGGTCTACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTACATGGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR-3UTR GCA 90 bp AGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGGGGGTAGTTACAACATaGAGGCCATCACCTACGAAG +
Preference number: 2 (lower is better)
Translates to: SYNMQAITYEGLCFQPWQGVVTT*RPSPTK
Trigger: CTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCC...CTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR-3UTR TCA 90 bp CTGGTGAGGCCAGCAGGATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCAAGAGAATGGAGACCTTaGGATTTGAAGGAAACTTTG +
Preference number: 2 (lower is better)
Translates to: LVRPAGSGTQPECPRPGPREWRP*DLKETL
Trigger: CAAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCT...TGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp GACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTGAGAAAGGGATCCACCTGCCCCACCTGTaGACTCTCGGGAAAATCGTG +
Preference number: 2 (lower is better)
Translates to: DSCHTPEDAALCLTEKGIHLPHL*TLGKIV
Trigger: CACGATTTTCCCGAGAGTTCACAGGTGGGGCAGGTG...GATCCCTTTCTCAGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
3UTR-3UTR GCA 90 bp TTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATGAGGCTCAGCCATACTGTCCCTaGAGGGGCTCGCTGGGACAC +
Preference number: 2 (lower is better)
Translates to: FSWSYDFLPLTLRLTDEAQPYCP*RGSLGH
Trigger: GTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTG...AGCCTCATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR-3UTR GCA 90 bp CAGGTCCATGTAGGCCTGGGTCAGGTTGAAATAGCCAGTGGTGAGGTAGACCTTATCCCCAGCAGCTGCTaGATCTTCCTGGGTCAAAAG +
Preference number: 2 (lower is better)
Translates to: QVHVGLGQVEIASGEVDLIPSSC*IFLGQK
Trigger: CTTTTGACCCAGGAAGATGCAGCAGCTGCTGGGGAT...AAGGTCTACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTACATGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR TCA 90 bp AGCATCCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTCTGGAAGCTCTGGTTaGGTCAGAACAACCACCTGC +
Preference number: 2 (lower is better)
Translates to: SIQLLTLRTAAIPLKMLLSGSSG*VRTTTC
Trigger: GCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGA...GAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
3UTR-3UTR GCA 90 bp AGAGACAGCACCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTCACCATGGTACTCAGCCCGAGTaGCCAAGACCAGGTCCATGT +
Preference number: 2 (lower is better)
Translates to: RDSTCLSSEEVLDQWSHHGTQPE*PRPGPC
Trigger: ACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACC...ATGGTGACTCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGTGCTGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588169.5
3UTR-3UTR CCA 90 bp TCTGAAAATGCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTGGCCTGAAGCCTTTTaGGGTAGAGCCCAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: SENATDLNGWNPRALAELWPEAF*GRAQLC
Trigger: GCAGAGCTGGGCTCTACCCCAAAAGGCTTCAGGCCA...CAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGCATTTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR-3UTR CCA 90 bp GACCCTCTTATTGGCTGCCTTGCAGTACTCGGCCCGGTCCCCTTTGTAAGGATGACAGATTTAAACGGATaGAACCCGAGGGCTTTAGCT +
Preference number: 2 (lower is better)
Translates to: DPLIGCLAVLGPVPFVRMTDLNG*NPRALA
Trigger: AGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGT...CATCCTTACAAAGGGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR-3UTR TCA 90 bp TTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATGAGGCTGACTGGAGTCATCGCTaGAGCGCGGCTGAAAGAGCT +
Preference number: 2 (lower is better)
Translates to: FSWSYDFLPLTLRLTDEADWSHR*SAAERA
Trigger: AGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTC...AGCCTCATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR-3UTR GCA 90 bp GCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAGTCAGAACAACCACCTaGCCCACCTGTGAACTCTCG +
Preference number: 2 (lower is better)
Translates to: ASNFEDSCHTPEDAALCLVRTTT*PTCELS
Trigger: CGAGAGTTCACAGGTGGGGCAGGTGGTTGTTCTGAC...TAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
3UTR CAA 90 bp GCGCTCCGCCTCAGTCAACAGGGTCTCAGTGACAATCTCATCGATTaGAATCTCGAAGGGCTTCATCTGAATCAGCGGATAAATCCAGGT +
Preference number: 2 (lower is better)
Translates to: ALRLSQQGLSDNLID*NLEGLHLNQRINPG
Trigger: ACCTGGATTTATCCGCTGATTCAGATGAAGCCCTTCGAGATTCAAATCGATGAGATTGTCACTGAGACCCTGTTGACTGAGGCGGAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR GCA 90 bp TCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTGTCAGAACAACCACCTaGCCCACCTGTGAACTCTCG +
Preference number: 2 (lower is better)
Translates to: SNFEDSCHTPEDAALCLTVRTTT*PTCELS
Trigger: CGAGAGTTCACAGGTGGGGCAGGTGGTTGTTCTGAC...AGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
3UTR-3UTR GCA 90 bp GTGTATGTACACATAGGGCAGACATTACACATTAAGAATCAGGGAACTTTACTCCAGCCATACTGTCCCTaGAGGGGCTCGCTGGGACAC +
Preference number: 2 (lower is better)
Translates to: VYVHIGQTLHIKNQGTLLQPYCP*RGSLGH
Trigger: GTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTG...GAGTAAAGTTCCCTGATTCTTAATGTGTAATGTCTGCCCTATGTGTACATACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR-3UTR CCA 90 bp AAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTGGTACTCAGCCCGAGTGTCTGTAATTTTTAGCTaGAGTTATGACTTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: KKPFTSGEASRIWYSARVSVIFS*SYDFLP
Trigger: TGGCAGGAAGTCATAACTCCAGCTAAAAATTACAGA...CACTCGGGCTGAGTACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR-3UTR CCA 90 bp GACCCTCTTATTGGCTGCCTTGCAGTACTCGGCCCGGTCCCCTTTGTAAGGATGGAAGGAAACTTTGCTTaGAGTGACTTTTCTAGAGTA +
Preference number: 2 (lower is better)
Translates to: DPLIGCLAVLGPVPFVRMEGNFA*SDFSRV
Trigger: TACTCTAGAAAAGTCACTCCAAGCAAAGTTTCCTTC...CATCCTTACAAAGGGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CCA 90 bp CTTCATCAAGGCCATTCCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTGAAGGAAACTTTGCTTaGAGTGACTTTTCTAGAGTA +
Preference number: 2 (lower is better)
Translates to: LHQGHSCLSSEEVLDQWSEGNFA*SDFSRV
Trigger: TACTCTAGAAAAGTCACTCCAAGCAAAGTTTCCTTC...ACTCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGAATGGCCTTGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR-3UTR CCA 90 bp GCGAGTAGAAATAATAGCAGTCTGGTTAAAGGCAATATTTATATGCACAGATGTTCTGTAATTTTTAGCTaGAGTTATGACTTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: ASRNNSSLVKGNIYMHRCSVIFS*SYDFLP
Trigger: TGGCAGGAAGTCATAACTCCAGCTAAAAATTACAGA...ACATCTGTGCATATAAATATTGCCTTTAACCAGACTGCTATTATTTCTACTCGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262764.11
3UTR GCA 72 bp ACCATCCCATCCACCACCTGCACCGTGTCGTCCCCCTaGAGCTGCAGGGACACATCCCCCACCGCGTCCACC +
Preference number: 3 (lower is better)
Translates to: TIPSTTCTVSSP*SCRDTSPTAST
Trigger: GGTGGACGCGGTGGGGGATGTGTCCCTGCAGCTGCAGGGGGACGACACGGTGCAGGTGGTGGATGGGATGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR TCA 72 bp TTGGCGTGGAACGTCCAGCCCCTCCGCCAGTACTCCTaGAGCTGGACCCGCTCCTGCTGTCCCAGGCTGCAC +
Preference number: 3 (lower is better)
Translates to: LAWNVQPLRQYS*SWTRSCCPRLH
Trigger: GTGCAGCCTGGGACAGCAGGAGCGGGTCCAGCTTCAGGAGTACTGGCGGAGGGGCTGGACGTTCCACGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 72 bp GCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTaGCCCCAAAGAAGCCATTCACCTCTGGTGAGGCCA +
Preference number: 3 (lower is better)
Translates to: AHRPLGWRRPPP*PQRSHSPLVRP
Trigger: TGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 72 bp GGAGACTCGGACCTGCTCTGGGAACCTCCGCAGGAGTaGGAGCAGCATTGTGCGGGAGTTCTTCCGGCCTCG +
Preference number: 3 (lower is better)
Translates to: GDSDLLWEPPQE*EQHCAGVLPAS
Trigger: CGAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CAA 90 bp CCAGAGGCCTTTGGCGTGGAACGTCCAGCCCCTCCGCCAGTACTCCTGAAGCTGGGAGTGGGAGCAGCATaGTGCGGGAGTTCTTCCGGC +
Preference number: 3 (lower is better)
Translates to: PEAFGVERPAPPPVLLKLGVGAA*CGSSSG
Trigger: GCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCC...CAGCTTCAGGAGTACTGGCGGAGGGGCTGGACGTTCCACGCCAAAGGCCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CAA 90 bp GGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGAGGCCGATGGTCTCGTaGAAGCGCTCAGGGATGAGG +
Preference number: 3 (lower is better)
Translates to: GMAPATPLAPKKPFTSGERPMVS*KRSGMR
Trigger: CCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCT...CTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 72 bp AGAACTGTCGCTCGATGTGCACATAGGCCGCTGGGATaGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCAT +
Preference number: 3 (lower is better)
Translates to: RTVARCAHRPLG*RRPPPWPQRSH
Trigger: ATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGACAGTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CAA 90 bp TCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACAGGAGTGGGAGCAGCATaGTGCGGGAGTTCTTCCGGC +
Preference number: 3 (lower is better)
Translates to: SSPTASPGDSAARRWQRTGVGAA*CGSSSG
Trigger: GCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCC...TGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CAA 90 bp CTGGTGAGGCCAGCAGGATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCACTCTTATTGGCTGCCTaGCAGTACTCGGCCCGGTCC +
Preference number: 3 (lower is better)
Translates to: LVRPAGSGTQPECPRPGPLLLAA*QYSARS
Trigger: GGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAG...TGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTCACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR TCA 72 bp CACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTaGGGCCAGCAGGATCTGGTACTCAGCCCGAGTGCC +
Preference number: 3 (lower is better)
Translates to: HPLGPKEAIHLW*GQQDLVLSPSA
Trigger: GGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR TCA 72 bp GGACCCGCTCCTGCTGTCCCAGGCTGCACACCTCACTaGAGAACTGTCGCTCGATGTGCACATAGGCCGCTG +
Preference number: 3 (lower is better)
Translates to: GPAPAVPGCTPH*RTVARCAHRPL
Trigger: CAGCGGCCTATGTGCACATCGAGCGACAGTTCTTCAGTGAGGTGTGCAGCCTGGGACAGCAGGAGCGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR GCA 72 bp ACTGGCAGCACACCTGACCCTCAGCCATACTGTCCCTaGAGGGGCTCGCTGGGACACCCAGACTGGAGTCAT +
Preference number: 3 (lower is better)
Translates to: TGSTPDPQPYCP*RGSLGHPDWSH
Trigger: ATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTGAGGGTCAGGTGTGCTGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
3UTR GCA 72 bp AGAGCCAATCAGCGTGAGACAGGGCAGGCTGCTCCCTaGCAGGTACAGCCAGAGGCCTTTGGCGTGGAACGT +
Preference number: 3 (lower is better)
Translates to: RANQRETGQAAP*QVQPEAFGVER
Trigger: ACGTTCCACGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGTCTCACGCTGATTGGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 72 bp ACTGAAGAACTGTCGCTCGATGTGCACATAGGCCGCTaGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAA +
Preference number: 3 (lower is better)
Translates to: TEELSLDVHIGR*DGAGHPLGPKE
Trigger: TTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGACAGTTCTTCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 72 bp CCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTaGCAGAGGACACCACACCTGACCTCAGGTAGAGCT +
Preference number: 3 (lower is better)
Translates to: PTASPGDSAARR*QRTPHLTSGRA
Trigger: AGCTCTACCTGAGGTCAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
3UTR GCA 72 bp ACCATCTTCACCCACAGCTTCACCTGGCGACTCGGCTaGTCGAAGGTGGCAGAGGACACCACACCTGACCTC +
Preference number: 3 (lower is better)
Translates to: TIFTHSFTWRLG*SKVAEDTTPDL
Trigger: GAGGTCAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGATGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
3UTR TCA 72 bp GGTCTGGGCATGCAGCATCTGCTGGCGGGTCCTGGCTaGGTTGATCACATCCATGACCCTCTTATTGGCTGC +
Preference number: 3 (lower is better)
Translates to: GLGMQHLLAGPG*VDHIHDPLIGC
Trigger: GCAGCCAATAAGAGGGTCATGGATGTGATCAACTCAGCCAGGACCCGCCAGCAGATGCTGCATGCCCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR GCA 72 bp GGTCAGGTTGAAATAGCCAGTGGTGAGGTAGACCTTTaGCCCGCGCTCCGCCTCAGTCAACAGGGTCTCAGT +
Preference number: 3 (lower is better)
Translates to: GQVEIASGEVDL*PALRLSQQGLS
Trigger: ACTGAGACCCTGTTGACTGAGGCGGAGCGCGGGGCAAAGGTCTACCTCACCACTGGCTATTTCAACCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 72 bp GCTGCTGCATCTTCCTGGGTCAAAAGAGAGTTGCTGTaGAAGGTCTGGGCATGCAGCATCTGCTGGCGGGTC +
Preference number: 3 (lower is better)
Translates to: AAASSWVKRELL*KVWACSICWRV
Trigger: GACCCGCCAGCAGATGCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTTGACCCAGGAAGATGCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 72 bp GCTGGTCTGCGATCCCCAGCAGCTGCTGCATCTTCCTaGGTCAAAAGAGAGTTGCTGTGGAAGGTCTGGGCA +
Preference number: 3 (lower is better)
Translates to: AGLRSPAAAASS*VKRELLWKVWA
Trigger: TGCCCAGACCTTCCACAGCAACTCTCTTTTGACCCAGGAAGATGCAGCAGCTGCTGGGGATCGCAGACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 72 bp AAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTaGTACTCAGCCCGAGTGCCCAAGACCAGGTCCATG +
Preference number: 3 (lower is better)
Translates to: KKPFTSGEASRI*YSARVPKTRSM
Trigger: CATGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CAA 90 bp CAAGACCAGGTCCATGTAGGCCTGGGTCAGGTTGAAATAGCCAGTGGTGAGGTACTCTTATTGGCTGCCTaGCAGTACTCGGCCCGGTCC +
Preference number: 3 (lower is better)
Translates to: QDQVHVGLGQVEIASGEVLLLAA*QYSARS
Trigger: GGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAG...TACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTACATGGACCTGGTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR GCA 72 bp TGGGTCAAAAGAGAGTTGCTGTGGAAGGTCTGGGCATaGAGCATCTGCTGGCGGGTCCTGGCTGAGTTGATC +
Preference number: 3 (lower is better)
Translates to: WVKRELLWKVWA*SICWRVLAELI
Trigger: GATCAACTCAGCCAGGACCCGCCAGCAGATGCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTTGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR GCA 72 bp CTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATaGCATCACGACCCGCCTCTTGGCTACTCTTATCTG +
Preference number: 3 (lower is better)
Translates to: LLFQRTCPQVEG*HHDPPLGYSYL
Trigger: CAGATAAGAGTAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586510.6
3UTR CCA 72 bp CATCTGAATCAGCGGATAAATCCAGGTGTCAGGGGCTaGTCTGCGATCCCCAGCAGCTGCTGCATCTTCCTG +
Preference number: 3 (lower is better)
Translates to: HLNQRINPGVRG*SAIPSSCCIFL
Trigger: CAGGAAGATGCAGCAGCTGCTGGGGATCGCAGACCAGCCCCTGACACCTGGATTTATCCGCTGATTCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CAA 90 bp TGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCGATTTGAAGGAAACTTaGCTTGGAGTGACTTTTCTA +
Preference number: 3 (lower is better)
Translates to: CAHRPLGWRRPPPWPQRSDLKET*LGVTFL
Trigger: TAGAAAAGTCACTCCAAGCAAAGTTTCCTTCAAATC...GCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CAA 90 bp ACTGTCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGAAGAGAATGGAGACCTaGAGATTTGAAGGAAACTTT +
Preference number: 3 (lower is better)
Translates to: TVARCAHRPLGWRRPPPWKRMET*RFEGNF
Trigger: AAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCTT...CCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CAA 90 bp CCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTGGTCTCAAGATGACGCTGTaGTCGAAGAGGTACACCTTA +
Preference number: 3 (lower is better)
Translates to: PPWPQRSHSPLVRPAGSGLKMTL*SKRYTL
Trigger: TAAGGTGTACCTCTTCGACAACAGCGTCATCTTGAG...ACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR TCA 72 bp TTGCCCCGCGCTCCGCCTCAGTCAACAGGGTCTCAGTaGCAATCTCATCGATTTGAATCTCGAAGGGCTTCA +
Preference number: 3 (lower is better)
Translates to: LPRAPPQSTGSQ*QSHRFESRRAS
Trigger: TGAAGCCCTTCGAGATTCAAATCGATGAGATTGTCACTGAGACCCTGTTGACTGAGGCGGAGCGCGGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR GCA 72 bp AAGATGACGCTGTTGTCGAAGAGGTACACCTTAATGTaGTGGAGGCCGATGGTCTCGTTGAAGCGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: KMTLLSKRYTLM*WRPMVSLKRSG
Trigger: CCCTGAGCGCTTCAACGAGACCATCGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAACAGCGTCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CCA 72 bp ATGACGCTGTTGTCGAAGAGGTACACCTTAATGTGCTaGAGGCCGATGGTCTCGTTGAAGCGCTCAGGGATG +
Preference number: 3 (lower is better)
Translates to: MTLLSKRYTLMC*RPMVSLKRSGM
Trigger: CATCCCTGAGCGCTTCAACGAGACCATCGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAACAGCGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR-3UTR CAA 90 bp GATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCATGTAGGCCTGGGTCAGAAGAGAATGGAGACCTaGAGATTTGAAGGAAACTTT +
Preference number: 3 (lower is better)
Translates to: DLVLSPSAQDQVHVGLGQKRMET*RFEGNF
Trigger: AAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCTT...CTGACCCAGGCCTACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp GGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGC +
Preference number: 4 (lower is better)
Translates to: GWRRPPPWPQRSHSPLVRGGPGS*RGGRTG
Trigger: GCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCC...CCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp TCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGCCCCTCGTCCCCCTGCAGCTaGAGGGACACATCCCCCACC +
Preference number: 4 (lower is better)
Translates to: SLDVHIGRWDGAGHPLGPSSPCS*RDTSPT
Trigger: GGTGGGGGATGTGTCCCTGCAGCTGCAGGGGGACGA...GGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp CAGACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGC +
Preference number: 4 (lower is better)
Translates to: QTGVIAEARLKELTPAMPGGPGS*RGGRTG
Trigger: GCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCC...AGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262764.11
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CCACCCTTCCTGCCAGCCCCTCCCTCACTTACTGGCAGCACACCTGACCCTCAGGGTGACCTCCTGCGCTaGCGGTCCCGGTTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: PPFLPAPPSLTGSTPDPQGDLLR*RSRFLP
Trigger: CGGCAGGAACCGGGACCGCCAGCGCAGGAGGTCACC...CTGAGGGTCAGGTGTGCTGCCAGTAAGTGAGGGAGGGGCTGGCAGGAAGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR CCA 90 bp GCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGCTGCATAGGCCGCTGGGATaGCGCCGGCCACCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: AILSLQGLAGTPRLESSLHRPLG*RRPPPW
Trigger: CCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATG...CAGCGATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp TCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGCCCCACCCACAGCTTCACCTaGCGACTCGGCTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: SLDVHIGRWDGAGHPLGPTHSFT*RLGCSK
Trigger: CTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGT...GGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
3UTR CAA 72 bp CCTGCTCTGGGAACCTCCGCAGGAGTGGGAGCAGCATaGTGCGGGAGTTCTTCCGGCCTCGTGAGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: PALGTSAGVGAA*CGSSSGLVSPA
Trigger: CGCGGGGCTCACGAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCCTGCGGAGGTTCCCAGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp AGCCCAGCTCTGCAGAGGGCGGGGAGTGTGAGGACCCCACCCTTCCTGCCAGCCCGTCCACCAGCTCCGTaGAGAAGTCGGCAATCTCCG +
Preference number: 4 (lower is better)
Translates to: SPALQRAGSVRTPPFLPARPPAP*RSRQSP
Trigger: CGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACG...GGCTGGCAGGAAGGGTGGGGTCCTCACACTCCCCGCCCTCTGCAGAGCTGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTTGGCTAGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGC +
Preference number: 4 (lower is better)
Translates to: PKDLSPGRGMPSRPASWLGGPGS*RGGRTG
Trigger: GCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCC...TAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586510.6
ENST00000589425.5
CDS-3UTR GCA 90 bp GATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCATGTAGGCCTGGGTCAGGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGC +
Preference number: 4 (lower is better)
Translates to: DLVLSPSAQDQVHVGLGQGGPGS*RGGRTG
Trigger: GCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCC...CTGACCCAGGCCTACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp GCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGCTGGCCATGGTGACCTCCTaGGCTGGCGGTCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: AILSLQGLAGTPRLESSLAMVTS*AGGPGS
Trigger: GGAACCGGGACCGCCAGCGCAGGAGGTCACCATGGC...CAGCGATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR CCA 90 bp CAGACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTGCACATAGGCCGCTaGGATGGCGCCGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: QTGVIAEARLKELTPAMPVHIGR*DGAGHP
Trigger: GGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCAC...AGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262764.11
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp TGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCTGAAGTGCACATAGGCCGCTaGGATGGCGCCGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: CRPSPTKASASSRGSWPEVHIGR*DGAGHP
Trigger: GGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCAC...TTCAGGCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp ACTGTCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGACAGCCAGAGGCCTTTaGCGTGGAACGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TVARCAHRPLGWRRPPPWTARGL*RGTSSP
Trigger: GGGGCTGGACGTTCCACGCCAAAGGCCTCTGGCTGT...CCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGACAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp GGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGCCTGCAGGGGCTCGCTaGGACACCCAGACTGGAGTC +
Preference number: 4 (lower is better)
Translates to: GMAPATPLAPKKPFTSGEPAGAR*DTQTGV
Trigger: GACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGG...CTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR TCA 90 bp GCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGCTGAGCAAGGTGGGGAGGTaGCCTGGGGAACAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AILSLQGLAGTPRLESSLSKVGR*PGEQLG
Trigger: CCCCAGCTGTTCCCCAGGTCACCTCCCCACCTTGCT...CAGCGATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR GCA 90 bp TGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCCCCAGGTAGAGGGATaGCATCACGACCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: CAHRPLGWRRPPPWPQRSPQVEG*HHDPPL
Trigger: AAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGG...GCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR GCA 90 bp CGTGAGACAGGGCAGGCTGCTCCCTGCCAGGTACAGCCAGAGGCCTTTGGCGTGAGGGAGACTCGGACCTaGTCTGGGAACCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RETGQAAPCQVQPEAFGVRETRT*SGNLRR
Trigger: CCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCTCCCT...CACGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGTCTCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp CTCAGGGATGAGGAGCCGAAGCAGCCCACGGAGGTGCGGCGTGTGAAAGAGGGATCGTCCCCCTGCAGCTaGAGGGACACATCCCCCACC +
Preference number: 4 (lower is better)
Translates to: LRDEEPKQPTEVRRVKEGSSPCS*RDTSPT
Trigger: GGTGGGGGATGTGTCCCTGCAGCTGCAGGGGGACGA...TCCCTCTTTCACACGCCGCACCTCCGTGGGCTGCTTCGGCTCCTCATCCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp CGTGAGACAGGGCAGGCTGCTCCCTGCCAGGTACAGCCAGAGGCCTTTGGCGTGACCTGGCGACTCGGCTaGTCGAAGGTGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: RETGQAAPCQVQPEAFGVTWRLG*SKVAED
Trigger: GTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGT...CACGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGTCTCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp GACAGGGCAGGCTGCTCCCTGCCAGGTACAGCCAGAGGCCTTTGGCGTGGAACGCCGGTGCACGCCTTCTaGACACAGGCAGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: DRAGCSLPGTARGLWRGTPVHAF*TQAARW
Trigger: CCACCTTGCTGCCTGTGTCCAGAAGGCGTGCACCGG...CGTTCCACGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR CCA 90 bp CCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACACCACACCCCAGGTGTCAGGGGCTaGTCTGCGATCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PQLHLATRLLEGGRGHHTPGVRG*SAIPSS
Trigger: GCTGCTGGGGATCGCAGACCAGCCCCTGACACCTGG...GGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTTGGCTACATAGGCCGCTGGGATaGCGCCGGCCACCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PKDLSPGRGMPSRPASWLHRPLG*RRPPPW
Trigger: CCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATG...TAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR TCA 90 bp GTGAAGCTGCTGCTGCAGGGCCTGGTTCTCCGTCACGATCGCAATCTGGGCCTCCTCCGCCAGTACTCCTaGAGCTGGACCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VKLLLQGLVLRHDRNLGLLRQYS*SWTRSC
Trigger: GCAGGAGCGGGTCCAGCTTCAGGAGTACTGGCGGAG...GAGGCCCAGATTGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCAGCTTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp ACTGTCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGGACTGGAGTCATCGCTaGAGCGCGGCTGAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TVARCAHRPLGWRRPPPWDWSHR*SAAERA
Trigger: AGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTC...CCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp AGCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCAGAGGGCGGGGAGTGTaGGGACCCCACCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPAGRGSYNMQAITYEGLRGRGV*GPHPSC
Trigger: GCAGGAAGGGTGGGGTCCTCACACTCCCCGCCCTCT...GAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp TGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCATCCACTGGAACCGGTaGACGCCTTCTGGACACAGG +
Preference number: 4 (lower is better)
Translates to: CAHRPLGWRRPPPWPQRSIHWNR*TPSGHR
Trigger: CCTGTGTCCAGAAGGCGTGCACCGGTTCCAGTGGAT...GCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR GCA 90 bp ACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACACCACACCTGACCTCAGGAGGGAGACTCGGACCTaGTCTGGGAACCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TWRLGCSKVAEDTTPDLRRETRT*SGNLRR
Trigger: CCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCTCCCT...CCTGAGGTCAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCTCGTCCCCCTGCAGCTaGAGGGACACATCCCCCACC +
Preference number: 4 (lower is better)
Translates to: QHAGHHLRRPLLPAVAAGSSPCS*RDTSPT
Trigger: GGTGGGGGATGTGTCCCTGCAGCTGCAGGGGGACGA...GCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCTGAAGACCGTGTCGTCCCCCTaGAGCTGCAGGGACACATCC +
Preference number: 4 (lower is better)
Translates to: AGHHLRRPLLPAVAAGLKTVSSP*SCRDTS
Trigger: GGATGTGTCCCTGCAGCTGCAGGGGGACGACACGGT...CTTCAGGCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CTCAGGGATGAGGAGCCGAAGCAGCCCACGGAGGTGCGGCGTGTGAAAGAGGGAACCGTGTCGTCCCCCTaGAGCTGCAGGGACACATCC +
Preference number: 4 (lower is better)
Translates to: LRDEEPKQPTEVRRVKEGTVSSP*SCRDTS
Trigger: GGATGTGTCCCTGCAGCTGCAGGGGGACGACACGGT...TCCCTCTTTCACACGCCGCACCTCCGTGGGCTGCTTCGGCTCCTCATCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp GCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGCTGACCGTGTCGTCCCCCTaGAGCTGCAGGGACACATCC +
Preference number: 4 (lower is better)
Translates to: AILSLQGLAGTPRLESSLTVSSP*SCRDTS
Trigger: GGATGTGTCCCTGCAGCTGCAGGGGGACGACACGGT...CAGCGATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGCTGATCCCATCCACCACCTaGACCGTGTCGTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: AILSLQGLAGTPRLESSLIPSTT*TVSSPC
Trigger: GCAGGGGGACGACACGGTGCAGGTGGTGGATGGGAT...CAGCGATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CCCCACCGCGTCCACCAGCTCCGTGAAGAAGTCGGCAATCTCCGCACAGTCCTGTGGGCATGCAGCATCTaGTGGCGGGTCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PHRVHQLREEVGNLRTVLWACSI*WRVLAE
Trigger: CTCAGCCAGGACCCGCCAGCAGATGCTGCATGCCCA...CAGGACTGTGCGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACGCGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR GCA 90 bp GCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGCTGTGGGCATGCAGCATCTaGTGGCGGGTCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AILSLQGLAGTPRLESSLWACSI*WRVLAE
Trigger: CTCAGCCAGGACCCGCCAGCAGATGCTGCATGCCCA...CAGCGATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp TCCCCCACCGCGTCCACCAGCTCCGTGAAGAAGTCGGCAATCTCCGCACAGTCCTGTCAGGGGCTGGTCTaGGATCCCCAGCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPTASTSSVKKSAISAQSCQGLV*DPQQLL
Trigger: CAGCAGCTGCTGGGGATCGCAGACCAGCCCCTGACA...GGACTGTGCGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACGCGGTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp TCCCCCACCGCGTCCACCAGCTCCGTGAAGAAGTCGGCAATCTCCGCACAGTCCGGTGAGGTAGACCTTTaGCCCGCGCTCCGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SPTASTSSVKKSAISAQSGEVDL*PALRLS
Trigger: ACTGAGGCGGAGCGCGGGGCAAAGGTCTACCTCACC...GGACTGTGCGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACGCGGTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp ACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACACCACAAGCTGGACCCGCTCCTaGTGTCCCAGGCTGCACACC +
Preference number: 4 (lower is better)
Translates to: THSFTWRLGCSKVAEDTTSWTRS*CPRLHT
Trigger: GGTGTGCAGCCTGGGACAGCAGGAGCGGGTCCAGCT...TGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp ATCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACCTGGGGAACAGCTCCTaGGCTGGCGGTCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: IFTHSFTWRLGCSKVAEDLGNSS*AGGPGS
Trigger: GGAACCGGGACCGCCAGCGCAGGAGCTGTTCCCCAG...GTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR CCA 90 bp GAAAGAGGGAGACTCGGACCTGCTCTGGGAACCTCCGCAGGAGTGGGAGCAGCACAGAGGCCTTTGGCGTaGAACGTCCAGCCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: ERGRLGPALGTSAGVGAAQRPLA*NVQPLR
Trigger: GCGGAGGGGCTGGACGTTCCACGCCAAAGGCCTCTG...TGCTGCTCCCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCTCCCTCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp CGGGAGTTCTTCCGGCCTCGTGAGCCCCGCGTGAAGTCTAAGAGAATGGAGACCGAACAGCTCCTGCGCTaGCGGTCCCGGTTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: REFFRPREPRVKSKRMETEQLLR*RSRFLP
Trigger: CGGCAGGAACCGGGACCGCCAGCGCAGGAGCTGTTC...GGTCTCCATTCTCTTAGACTTCACGCGGGGCTCACGAGGCCGGAAGAACTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR TCA 90 bp CAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCGGAGGTGCGGCGTGTaGAAGAGGGAGACTCGGACC +
Preference number: 4 (lower is better)
Translates to: QLLFQRTCPQVEGCHHDPRRCGV*KRETRT
Trigger: GGTCCGAGTCTCCCTCTTTCACACGCCGCACCTCCG...CGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR TCA 90 bp ACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCGGAGGTGCGGCGTGTaGAAGAGGGAGACTCGGACC +
Preference number: 4 (lower is better)
Translates to: TTCRPSPTKASASSRGSWRRCGV*KRETRT
Trigger: GGTCCGAGTCTCCCTCTTTCACACGCCGCACCTCCG...CCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp ACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCTCCGCCAGTACTCCTaGAGCTGGACCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TTCRPSPTKASASSRGSWLRQYS*SWTRSC
Trigger: GCAGGAGCGGGTCCAGCTTCAGGAGTACTGGCGGAG...CCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CAGACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTTGCTCTTGCTCCTGGTaGAGCTGCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QTGVIAEARLKELTPAMPCSCSW*SCCCRA
Trigger: GGCCCTGCAGCAGCAGCTTCACCAGGAGCAAGAGCA...AGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262764.11
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp ATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTCATCAGAGGGCGGGGAGTGTaGGGACCCCACCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IAEARLKELTPAMPVIFIRGRGV*GPHPSC
Trigger: GCAGGAAGGGTGGGGTCCTCACACTCCCCGCCCTCT...GATGAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp AGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACACCACACCTGACGCCTCCAGGTCCCGGTaGACTGACCTTTGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: SFTWRLGCSKVAEDTTPDASRSR*TDLWRG
Trigger: TCCACGCCAAAGGTCAGTTCACCGGGACCTGGAGGC...GTCAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589426.5
CDS-3UTR GCA 90 bp AGCCCAGCTCTGCAGAGGGCGGGGAGTGTGAGGACCCCACCCTTCCTGCCAGCCGAGCTCGAAAAACTCTaGCGGGGAAGAAAGCACCCT +
Preference number: 4 (lower is better)
Translates to: SPALQRAGSVRTPPFLPAELEKL*RGRKHP
Trigger: AGGGTGCTTTCTTCCCCGGCAGAGTTTTTCGAGCTC...GGCTGGCAGGAAGGGTGGGGTCCTCACACTCCCCGCCCTCTGCAGAGCTGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR GCA 90 bp AGCCCAGCTCTGCAGAGGGCGGGGAGTGTGAGGACCCCACCCTTCCTGCCAGCCAGGTACACCTTAATGTaGTGGAGGCCGATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: SPALQRAGSVRTPPFLPARYTLM*WRPMVS
Trigger: CGAGACCATCGGCCTCCAGCACATTAAGGTGTACCT...GGCTGGCAGGAAGGGTGGGGTCCTCACACTCCCCGCCCTCTGCAGAGCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp ACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGTCGTCCCCCTGCAGCTaGAGGGACACATCCCCCACC +
Preference number: 4 (lower is better)
Translates to: TTCRPSPTKASASSRGSWSSPCS*RDTSPT
Trigger: GGTGGGGGATGTGTCCCTGCAGCTGCAGGGGGACGA...CCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp ACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACACCACAATCCCATCCACCACCTaGACCGTGTCGTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: THSFTWRLGCSKVAEDTTIPSTT*TVSSPC
Trigger: GCAGGGGGACGACACGGTGCAGGTGGTGGATGGGAT...TGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp TGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCTGAAATCCCATCCACCACCTaGACCGTGTCGTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: CRPSPTKASASSRGSWPEIPSTT*TVSSPC
Trigger: GCAGGGGGACGACACGGTGCAGGTGGTGGATGGGAT...TTCAGGCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp TGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCTGAATGGGCATGCAGCATCTaGTGGCGGGTCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: CRPSPTKASASSRGSWPEWACSI*WRVLAE
Trigger: CTCAGCCAGGACCCGCCAGCAGATGCTGCATGCCCA...TTCAGGCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp ACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACACCACACCTGACCTCAGGTGGAAGGTCTGGGCATaGAGCATCTGCTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: TWRLGCSKVAEDTTPDLRWKVWA*SICWRV
Trigger: GACCCGCCAGCAGATGCTGCATGCCCAGACCTTCCA...CCTGAGGTCAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp AGCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCAGCTGGACCCGCTCCTaGTGTCCCAGGCTGCACACC +
Preference number: 4 (lower is better)
Translates to: SPAGRGSYNMQAITYEGLSWTRS*CPRLHT
Trigger: GGTGTGCAGCCTGGGACAGCAGGAGCGGGTCCAGCT...GAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GTCCTGCAGGAACACGTAGCGGTCCTGGCGGTTGGTGAAGTAGGAGTCACTCAGGGGCAGGCTGCTCCCTaGCAGGTACAGCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VLQEHVAVLAVGEVGVTQGQAAP*QVQPEA
Trigger: GGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCC...CTGAGTGACTCCTACTTCACCAACCGCCAGGACCGCTACGTGTTCCTGCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR GCA 90 bp CCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTTGGCTATGGGACTCCATCTCCTaGGCTGGCGGTCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: PKDLSPGRGMPSRPASWLWDSIS*AGGPGS
Trigger: GGAACCGGGACCGCCAGCGCAGGAGATGGAGTCCCA...TAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS-3UTR CCA 90 bp GTGAAGCTGCTGCTGCAGGGCCTGGTTCTCCGTCACGATCGCAATCTGGGCCTCGACTCGGACCTGCTCTaGGAACCTCCGCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VKLLLQGLVLRHDRNLGLDSDLL*EPPQEW
Trigger: CCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTC...GAGGCCCAGATTGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCAGCTTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp GCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTCCAGGTGTCAGGGGCTaGTCTGCGATCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AQRDGVVTTCRPSPTKASPGVRG*SAIPSS
Trigger: GCTGCTGGGGATCGCAGACCAGCCCCTGACACCTGG...AGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCCCAGGTGTCAGGGGCTaGTCTGCGATCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PAPVPKDLSPGRGMPSRPPGVRG*SAIPSS
Trigger: GCTGCTGGGGATCGCAGACCAGCCCCTGACACCTGG...GGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR CCA 90 bp CTCAGCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCCGCCGGCCACCCCCTTaGCCCCAAAGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: LSHTVPAGARWDTQTGVIRRPPP*PQRSHS
Trigger: TGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCG...GATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp AGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCATAGGCCGCTGGGATaGCGCCGGCCACCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SYNMQAITYEGLCFQPWQHRPLG*RRPPPW
Trigger: CCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATG...CTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp TTCCTGCCAGCCCCTCCCTCACTTACTGGCAGCACACCTGACCCTCAGCCATACCAGAGGCCTTTGGCGTaGAACGTCCAGCCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: FLPAPPSLTGSTPDPQPYQRPLA*NVQPLR
Trigger: GCGGAGGGGCTGGACGTTCCACGCCAAAGGCCTCTG...GTATGGCTGAGGGTCAGGTGTGCTGCCAGTAAGTGAGGGAGGGGCTGGCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589425.5
CDS-3UTR CCA 90 bp GCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCTGAAGTCGGCTGCTCGAAGGTaGCAGAGGACACCACACCTG +
Preference number: 4 (lower is better)
Translates to: AGHHLRRPLLPAVAAGLKSAARR*QRTPHL
Trigger: CAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGA...CTTCAGGCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGCTGTCGGCTGCTCGAAGGTaGCAGAGGACACCACACCTG +
Preference number: 4 (lower is better)
Translates to: AILSLQGLAGTPRLESSLSAARR*QRTPHL
Trigger: CAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGA...CAGCGATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CCACCCTTCCTGCCAGCCCCTCCCTCACTTACTGGCAGCACACCTGACCCTCAGACCCACAGCTTCACCTaGCGACTCGGCTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PPFLPAPPSLTGSTPDPQTHSFT*RLGCSK
Trigger: CTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGT...CTGAGGGTCAGGTGTGCTGCCAGTAAGTGAGGGAGGGGCTGGCAGGAAGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CGTGAGACAGGGCAGGCTGCTCCCTGCCAGGTACAGCCAGAGGCCTTTGGCGTGTGGCCTGAAGCCTTTTaGGGTAGAGCCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RETGQAAPCQVQPEAFGVWPEAF*GRAQLC
Trigger: GCAGAGCTGGGCTCTACCCCAAAAGGCTTCAGGCCA...CACGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGTCTCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR CCA 90 bp GTCCACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACCTCCATCTCCTGCGCTaGCGGTCCCGGTTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: VHQLLFQRTCPQVEGCHHLHLLR*RSRFLP
Trigger: CGGCAGGAACCGGGACCGCCAGCGCAGGAGATGGAG...GTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS-3UTR TCA 90 bp ATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTCATCCGGAGGTGCGGCGTGTaGAAGAGGGAGACTCGGACC +
Preference number: 4 (lower is better)
Translates to: IAEARLKELTPAMPVIFIRRCGV*KRETRT
Trigger: GGTCCGAGTCTCCCTCTTTCACACGCCGCACCTCCG...GATGAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262764.11
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCGTCCACCAGCTCCGTaGAGAAGTCGGCAATCTCCG +
Preference number: 4 (lower is better)
Translates to: QHAGHHLRRPLLPAVAAGRPPAP*RSRQSP
Trigger: CGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACG...GCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CCAGAGGCCTTTGGCGTGGAACGTCCAGCCCCTCCGCCAGTACTCCTGAAGCTGGCCATTCACCTCTGGTaGGGCCAGCAGGATCTGGTA +
Preference number: 4 (lower is better)
Translates to: PEAFGVERPAPPPVLLKLAIHLW*GQQDLV
Trigger: TACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGC...CAGCTTCAGGAGTACTGGCGGAGGGGCTGGACGTTCCACGCCAAAGGCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp TGTGCACATAGGCCGCTGGGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCGAGCTCGAAAAACTCTaGCGGGGAAGAAAGCACCCT +
Preference number: 4 (lower is better)
Translates to: CAHRPLGWRRPPPWPQRSELEKL*RGRKHP
Trigger: AGGGTGCTTTCTTCCCCGGCAGAGTTTTTCGAGCTC...GCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR GCA 90 bp GTGAAGCTGCTGCTGCAGGGCCTGGTTCTCCGTCACGATCGCAATCTGGGCCTCGTGGGAGCAGCATTGTaGGGGAGTTCTTCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: VKLLLQGLVLRHDRNLGLVGAAL*GSSSGL
Trigger: GAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCAC...GAGGCCCAGATTGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCAGCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp GCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCTGAAGTCTTATTGGCTGCCTTaGAGTACTCGGCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: AGHHLRRPLLPAVAAGLKSYWLP*STRPGP
Trigger: GGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGA...CTTCAGGCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CCCCACCGCGTCCACCAGCTCCGTGAAGAAGTCGGCAATCTCCGCACAGTCCTGTCTTATTGGCTGCCTTaGAGTACTCGGCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: PHRVHQLREEVGNLRTVLSYWLP*STRPGP
Trigger: GGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGA...CAGGACTGTGCGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACGCGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR GCA 90 bp GCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGCTGGACCCTCTTATTGGCTaGCTTGCAGTACTCGGCCCG +
Preference number: 4 (lower is better)
Translates to: AILSLQGLAGTPRLESSLDPLIG*LAVLGP
Trigger: CGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTC...CAGCGATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp TCTGGGAACCTCCGCAGGAGTGGGAGCAGCATTGTGCGGGAGTTCTTCCGGCCTTGGAAGGTCTGGGCATaGAGCATCTGCTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: SGNLRRSGSSIVREFFRPWKVWA*SICWRV
Trigger: GACCCGCCAGCAGATGCTGCATGCCCAGACCTTCCA...AGGCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCCTGCGGAGGTTCCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp GCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTGGAAGGTCTGGGCATaGAGCATCTGCTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: APVPKDLSPGRGMPSRPAWKVWA*SICWRV
Trigger: GACCCGCCAGCAGATGCTGCATGCCCAGACCTTCCA...GGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR GCA 90 bp TTCCTGCCAGCCCCTCCCTCACTTACTGGCAGCACACCTGACCCTCAGCCATACTGTCAGGGGCTGGTCTaGGATCCCCAGCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FLPAPPSLTGSTPDPQPYCQGLV*DPQQLL
Trigger: CAGCAGCTGCTGGGGATCGCAGACCAGCCCCTGACA...GTATGGCTGAGGGTCAGGTGTGCTGCCAGTAAGTGAGGGAGGGGCTGGCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp AGTCCACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCAGGGCAGGCTGCTCCCTaGCAGGTACAGCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SPPAPVPKDLSPGRGMPSGQAAP*QVQPEA
Trigger: GGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCC...TGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR GCA 90 bp GCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTACCTGGCGACTCGGCTaGTCGAAGGTGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: AQRDGVVTTCRPSPTKASTWRLG*SKVAED
Trigger: GTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGT...AGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTCAGCCATACTGTCCCTaGAGGGGCTCGCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: AQRDGVVTTCRPSPTKASQPYCP*RGSLGH
Trigger: GTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTG...AGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CTCAGCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCACCTACGAAGGCCTCTaGTTCCAGCCGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LSHTVPAGARWDTQTGVITYEGL*FQPWQL
Trigger: CAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGT...GATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTTGGCTACCGGTGCACGCCTTCTaGACACAGGCAGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PKDLSPGRGMPSRPASWLPVHAF*TQAARW
Trigger: CCACCTTGCTGCCTGTGTCCAGAAGGCGTGCACCGG...TAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS-3UTR CCA 90 bp CCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTGGTGAGGCCAGCAGGATCTaGTACTCAGCCCGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PPWPQRSHSPLVRPAGSGEASRI*YSARVP
Trigger: GGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTC...ACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp TTCCTGCCAGCCCCTCCCTCACTTACTGGCAGCACACCTGACCCTCAGCCATACACAGCCAGAGGCCTTTaGCGTGGAACGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: FLPAPPSLTGSTPDPQPYTARGL*RGTSSP
Trigger: GGGGCTGGACGTTCCACGCCAAAGGCCTCTGGCTGT...GTATGGCTGAGGGTCAGGTGTGCTGCCAGTAAGTGAGGGAGGGGCTGGCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589425.5
CDS-3UTR TCA 90 bp AGTCCACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCAAGCAAGGTGGGGAGGTaGCCTGGGGAACAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPPAPVPKDLSPGRGMPSSKVGR*PGEQLG
Trigger: CCCCAGCTGTTCCCCAGGTCACCTCCCCACCTTGCT...TGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS-3UTR TCA 90 bp GCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGCTGCTGGAACCAGGTTTCTaGTCCACTGGAACCGGTGCA +
Preference number: 4 (lower is better)
Translates to: AILSLQGLAGTPRLESSLLEPGF*STGTGA
Trigger: TGCACCGGTTCCAGTGGATCAGAAACCTGGTTCCAG...CAGCGATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR TCA 90 bp GGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGTTGCACCGCTCAAGATaGCGCTGTTGTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GWRRPPPWPQRSHSPLVRLHRSR*RCCRRG
Trigger: ACCTCTTCGACAACAGCGTCATCTTGAGCGGTGCAA...CCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR TCA 90 bp CTCACTGAAGAACTGTCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCCTGGCGGGTCCTGGCTaGGTTGATCACATCCATGAC +
Preference number: 4 (lower is better)
Translates to: LTEELSLDVHIGRWDGAGLAGPG*VDHIHD
Trigger: GTCATGGATGTGATCAACTCAGCCAGGACCCGCCAG...GCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGACAGTTCTTCAGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp TTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTTCCTTGAGCCCAGCGGGCTCCGCCAGTACTCCTaGAGCTGGACCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LNGWNPRALAELFLEPSGLRQYS*SWTRSC
Trigger: GCAGGAGCGGGTCCAGCTTCAGGAGTACTGGCGGAG...CCCGCTGGGCTCAAGGAACAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp GACCCTCTTATTGGCTGCCTTGCAGTACTCGGCCCGGTCCCCTTTGTAAGGATGCTCCGCCAGTACTCCTaGAGCTGGACCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DPLIGCLAVLGPVPFVRMLRQYS*SWTRSC
Trigger: GCAGGAGCGGGTCCAGCTTCAGGAGTACTGGCGGAG...CATCCTTACAAAGGGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp CGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCTGCTCTTGCTCCTGGTaGAGCTGCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RDGVVTTCRPSPTKASASCSCSW*SCCCRA
Trigger: GGCCCTGCAGCAGCAGCTTCACCAGGAGCAAGAGCA...GGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CCACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGATGCTCTTGCTCCTGGTaGAGCTGCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPAPVPKDLSPGRGMPSRCSCSW*SCCCRA
Trigger: GGCCCTGCAGCAGCAGCTTCACCAGGAGCAAGAGCA...TCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR TCA 90 bp CTGGTGAGGCCAGCAGGATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCAGACTGGAGTCATCGCTaGAGCGCGGCTGAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LVRPAGSGTQPECPRPGPDWSHR*SAAERA
Trigger: AGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTC...TGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTCACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp CAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCGACTGGAGTCATCGCTaGAGCGCGGCTGAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: QHAGHHLRRPLLPAVAAGDWSHR*SAAERA
Trigger: AGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTC...GCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CTTTGTAAGGATGCACCATCCCATCCACCACCTGCACCGTGTCGTCCCCCTGCAAGCAAGGTGGGGAGGTaGCCTGGGGAACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LCKDAPSHPPPAPCRPPASKVGR*PGEQLL
Trigger: CAGGAGCTGTTCCCCAGGTCACCTCCCCACCTTGCT...TGCAGGGGGACGACACGGTGCAGGTGGTGGATGGGATGGTGCATCCTTACAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR TCA 90 bp CCACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGAGGCAGGAGAATCGCTTaGACCCGGGAGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PPAPVPKDLSPGRGMPSRGRRIA*TREAEL
Trigger: AAGCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCC...TCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS-3UTR GCA 90 bp CTCAGCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCATCCACTGGAACCGGTaGACGCCTTCTGGACACAGG +
Preference number: 4 (lower is better)
Translates to: LSHTVPAGARWDTQTGVIIHWNR*TPSGHR
Trigger: CCTGTGTCCAGAAGGCGTGCACCGGTTCCAGTGGAT...GATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR GCA 90 bp CCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTTGGCTACCCCAGGTAGAGGGATaGCATCACGACCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: PKDLSPGRGMPSRPASWLPQVEG*HHDPPL
Trigger: AAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGG...TAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586510.6
ENST00000589425.5
CDS-3UTR GCA 90 bp GAAAGAGGGAGACTCGGACCTGCTCTGGGAACCTCCGCAGGAGTGGGAGCAGCAGACCCTCTTATTGGCTaGCTTGCAGTACTCGGCCCG +
Preference number: 4 (lower is better)
Translates to: ERGRLGPALGTSAGVGAADPLIG*LAVLGP
Trigger: CGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTC...TGCTGCTCCCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCTCCCTCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp ATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTCATCTGGGCATGCAGCATCTaGTGGCGGGTCCTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: IAEARLKELTPAMPVIFIWACSI*WRVLAE
Trigger: CTCAGCCAGGACCCGCCAGCAGATGCTGCATGCCCA...GATGAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262764.11
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGATCCCCAGCAGCTGCTaGATCTTCCTGGGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: GWRRPPPWPQRSHSPLVRIPSSC*IFLGQK
Trigger: CTTTTGACCCAGGAAGATGCAGCAGCTGCTGGGGAT...CCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp GTCCACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGGTGAGGTAGACCTTTaGCCCGCGCTCCGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: VHQLLFQRTCPQVEGCHHGEVDL*PALRLS
Trigger: ACTGAGGCGGAGCGCGGGGCAAAGGTCTACCTCACC...GTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR GCA 90 bp CAAAGAGCCCTCTGGAAGCTCTGGTTGAGTCAGAACAACCACCTGCCCCACCTGAGCTGGACCCGCTCCTaGTGTCCCAGGCTGCACACC +
Preference number: 4 (lower is better)
Translates to: QRALWKLWLSQNNHLPHLSWTRS*CPRLHT
Trigger: GGTGTGCAGCCTGGGACAGCAGGAGCGGGTCCAGCT...CAGGTGGGGCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGCTCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR GCA 90 bp TTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTAGCTGGACCCGCTCCTaGTGTCCCAGGCTGCACACC +
Preference number: 4 (lower is better)
Translates to: LQHAGHHLRRPLLPAVAASWTRS*CPRLHT
Trigger: GGTGTGCAGCCTGGGACAGCAGGAGCGGGTCCAGCT...AGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCCAGCCATACTGTCCCTaGAGGGGCTCGCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: RDGVVTTCRPSPTKASASQPYCP*RGSLGH
Trigger: GTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTG...GGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp AAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTTGGCTACTCACCTACGAAGGCCTCTaGTTCCAGCCGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KDLSPGRGMPSRPASWLLTYEGL*FQPWQL
Trigger: CAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGT...GAGTAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR CCA 90 bp GCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCCGGTGCACGCCTTCTaGACACAGGCAGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGRGSYNMQAITYEGLCFPVHAF*TQAARW
Trigger: CCACCTTGCTGCCTGTGTCCAGAAGGCGTGCACCGG...GAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR CCA 90 bp CGTGAGACAGGGCAGGCTGCTCCCTGCCAGGTACAGCCAGAGGCCTTTGGCGTGAGGTTTCTGATCCACTaGAACCGGTGCACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RETGQAAPCQVQPEAFGVRFLIH*NRCTPS
Trigger: AGAAGGCGTGCACCGGTTCCAGTGGATCAGAAACCT...CACGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGTCTCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR CCA 90 bp CCACCCTTCCTGCCAGCCCCTCCCTCACTTACTGGCAGCACACCTGACCCTCAGTCACGACCCGCCTCTTaGCTACTCTTATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PPFLPAPPSLTGSTPDPQSRPAS*LLLSAP
Trigger: AGGGGCAGATAAGAGTAGCCAAGAGGCGGGTCGTGA...CTGAGGGTCAGGTGTGCTGCCAGTAAGTGAGGGAGGGGCTGGCAGGAAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589425.5
CDS-3UTR CCA 90 bp TCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACAGAACCTCCGCAGGAGTaGGAGCAGCATTGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: SSPTASPGDSAARRWQRTEPPQE*EQHCAG
Trigger: TCCCGCACAATGCTGCTCCCACTCCTGCGGAGGTTC...TGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACGACTCGGACCTGCTCTaGGAACCTCCGCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: HQLLFQRTCPQVEGCHHDDSDLL*EPPQEW
Trigger: CCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTC...GTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR CCA 90 bp GCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCGACTCGGACCTGCTCTaGGAACCTCCGCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: AGRGSYNMQAITYEGLCFDSDLL*EPPQEW
Trigger: CCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTC...GAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CTTAATGTGCTGGAGGCCGATGGTCTCGTTGAAGCGCTCAGGGATGAGGAGCCGCGCCGGCCACCCCCTTaGCCCCAAAGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: LNVLEADGLVEALRDEEPRRPPP*PQRSHS
Trigger: TGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCG...CGGCTCCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCTCCAGCACATTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp CAGGTCCATGTAGGCCTGGGTCAGGTTGAAATAGCCAGTGGTGAGGTAGACCTTCATAGGCCGCTGGGATaGCGCCGGCCACCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: QVHVGLGQVEIASGEVDLHRPLG*RRPPPW
Trigger: CCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATG...AAGGTCTACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTACATGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp GGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCAGAGGCCTTTGGCGTaGAACGTCCAGCCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: GRGSYNMQAITYEGLCFQQRPLA*NVQPLR
Trigger: GCGGAGGGGCTGGACGTTCCACGCCAAAGGCCTCTG...CTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589425.5
CDS-3UTR CCA 90 bp TTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTTGGCACCCACAGCTTCACCTaGCGACTCGGCTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: FQRTCPQVEGCHHDPPLGTHSFT*RLGCSK
Trigger: CTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGT...GCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR CCA 90 bp AGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCCTGCAGGGGCTCGCTaGGACACCCAGACTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SYNMQAITYEGLCFQPWQPAGAR*DTQTGV
Trigger: GACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGG...CTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp GCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCCTCGTGAGCCCCGCGTaGAGTCTAAGAGAATGGAGA +
Preference number: 4 (lower is better)
Translates to: APVPKDLSPGRGMPSRPALVSPA*SLREWR
Trigger: TCTCCATTCTCTTAGACTTCACGCGGGGCTCACGAG...GGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR TCA 90 bp TTCCTGCCAGCCCCTCCCTCACTTACTGGCAGCACACCTGACCCTCAGCCATACCTGGCGGGTCCTGGCTaGGTTGATCACATCCATGAC +
Preference number: 4 (lower is better)
Translates to: FLPAPPSLTGSTPDPQPYLAGPG*VDHIHD
Trigger: GTCATGGATGTGATCAACTCAGCCAGGACCCGCCAG...GTATGGCTGAGGGTCAGGTGTGCTGCCAGTAAGTGAGGGAGGGGCTGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCTGGCGGGTCCTGGCTaGGTTGATCACATCCATGAC +
Preference number: 4 (lower is better)
Translates to: QLLFQRTCPQVEGCHHDPLAGPG*VDHIHD
Trigger: GTCATGGATGTGATCAACTCAGCCAGGACCCGCCAG...CGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR TCA 90 bp ATCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACCTGGCGGGTCCTGGCTaGGTTGATCACATCCATGAC +
Preference number: 4 (lower is better)
Translates to: IFTHSFTWRLGCSKVAEDLAGPG*VDHIHD
Trigger: GTCATGGATGTGATCAACTCAGCCAGGACCCGCCAG...GTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CAGACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGGCTGCACACCTCACTaGAGAACTGTCGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: QTGVIAEARLKELTPAMPGCTPH*RTVARC
Trigger: ACATCGAGCGACAGTTCTTCAGTGAGGTGTGCAGCC...AGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262764.11
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp GTGAAGCTGCTGCTGCAGGGCCTGGTTCTCCGTCACGATCGCAATCTGGGCCTCGGCTGCACACCTCACTaGAGAACTGTCGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: VKLLLQGLVLRHDRNLGLGCTPH*RTVARC
Trigger: ACATCGAGCGACAGTTCTTCAGTGAGGTGTGCAGCC...GAGGCCCAGATTGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCAGCTTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp TTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTTCCTTGAGCCCAGCGGGGAGAGCCAATCAGCGTaGGACAGGGCAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LNGWNPRALAELFLEPSGESQSA*DRAGCS
Trigger: GGAGCAGCCTGCCCTGTCTCACGCTGATTGGCTCTC...CCCGCTGGGCTCAAGGAACAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589425.5
CDS-3UTR TCA 90 bp AGCCCAGCTCTGCAGAGGGCGGGGAGTGTGAGGACCCCACCCTTCCTGCCAGCCCTCAGAAGAAGTTCTTaGTCAGTGGAGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: SPALQRAGSVRTPPFLPALRRSS*SVESPS
Trigger: AGATGGTGACTCCACTGATCAAGAACTTCTTCTGAG...GGCTGGCAGGAAGGGTGGGGTCCTCACACTCCCCGCCCTCTGCAGAGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp AGCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCGACTGGAGTCATCGCTaGAGCGCGGCTGAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SPAGRGSYNMQAITYEGLDWSHR*SAAERA
Trigger: AGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTC...GAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp AGCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCATCCACTGGAACCGGTaGACGCCTTCTGGACACAGG +
Preference number: 4 (lower is better)
Translates to: SPAGRGSYNMQAITYEGLIHWNR*TPSGHR
Trigger: CCTGTGTCCAGAAGGCGTGCACCGGTTCCAGTGGAT...GAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR GCA 90 bp CAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGATCCACTGGAACCGGTaGACGCCTTCTGGACACAGG +
Preference number: 4 (lower is better)
Translates to: QLLFQRTCPQVEGCHHDPIHWNR*TPSGHR
Trigger: CCTGTGTCCAGAAGGCGTGCACCGGTTCCAGTGGAT...CGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS-3UTR GCA 90 bp CTTAATGTGCTGGAGGCCGATGGTCTCGTTGAAGCGCTCAGGGATGAGGAGCCGGTGGGAGCAGCATTGTaGGGGAGTTCTTCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LNVLEADGLVEALRDEEPVGAAL*GSSSGL
Trigger: GAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCAC...CGGCTCCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCTCCAGCACATTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp AGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGAGGGAGACTCGGACCTaGTCTGGGAACCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: SYNMQAITYEGLCFQPWQRETRT*SGNLRR
Trigger: CCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCTCCCT...CTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGGGAGACTCGGACCTaGTCTGGGAACCTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VVTTCRPSPTKASASSRGRETRT*SGNLRR
Trigger: CCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCTCCCT...GCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CGGGAGTTCTTCCGGCCTCGTGAGCCCCGCGTGAAGTCTAAGAGAATGGAGACCTCTTATTGGCTGCCTTaGAGTACTCGGCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: REFFRPREPRVKSKRMETSYWLP*STRPGP
Trigger: GGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGA...GGTCTCCATTCTCTTAGACTTCACGCGGGGCTCACGAGGCCGGAAGAACTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp AGCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCGACCCTCTTATTGGCTaGCTTGCAGTACTCGGCCCG +
Preference number: 4 (lower is better)
Translates to: SPAGRGSYNMQAITYEGLDPLIG*LAVLGP
Trigger: CGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTC...GAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACACCACACCATCCCCAGCAGCTGCTaGATCTTCCTGGGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: PQLHLATRLLEGGRGHHTIPSSC*IFLGQK
Trigger: CTTTTGACCCAGGAAGATGCAGCAGCTGCTGGGGAT...GGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCTGTCAGGGGCTGGTCTaGGATCCCCAGCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VVTTCRPSPTKASASSRGCQGLV*DPQQLL
Trigger: CAGCAGCTGCTGGGGATCGCAGACCAGCCCCTGACA...GCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp AGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGGGTGAGGTAGACCTTTaGCCCGCGCTCCGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SYNMQAITYEGLCFQPWQGEVDL*PALRLS
Trigger: ACTGAGGCGGAGCGCGGGGCAAAGGTCTACCTCACC...CTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CATCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGAGGTACTCAGCCCGAGTaGCCAAGACCAGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: HLHPQLHLATRLLEGGRGGTQPE*PRPGPC
Trigger: ACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACC...TCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp TTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTGGTACTCAAGCTGGACCCGCTCCTaGTGTCCCAGGCTGCACACC +
Preference number: 4 (lower is better)
Translates to: LAPKKPFTSGEASRIWYSSWTRS*CPRLHT
Trigger: GGTGTGCAGCCTGGGACAGCAGGAGCGGGTCCAGCT...TGAGTACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp AGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGACCTGGCGACTCGGCTaGTCGAAGGTGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SYNMQAITYEGLCFQPWQTWRLG*SKVAED
Trigger: GTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGT...CTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GTGAAGCTGCTGCTGCAGGGCCTGGTTCTCCGTCACGATCGCAATCTGGGCCTCTCACGACCCGCCTCTTaGCTACTCTTATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: VKLLLQGLVLRHDRNLGLSRPAS*LLLSAP
Trigger: AGGGGCAGATAAGAGTAGCCAAGAGGCGGGTCGTGA...GAGGCCCAGATTGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCAGCTTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR CCA 90 bp GCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCGAACCTCCGCAGGAGTaGGAGCAGCATTGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: AGRGSYNMQAITYEGLCFEPPQE*EQHCAG
Trigger: TCCCGCACAATGCTGCTCCCACTCCTGCGGAGGTTC...GAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GGCCCGGTCCCCTTTGTAAGGATGCACCATCCCATCCACCACCTGCACCGTGTCTTGCTGTGGAAGGTCTaGGCATGCAGCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GPVPFVRMHHPIHHLHRVLLWKV*ACSICW
Trigger: CCAGCAGATGCTGCATGCCCAGACCTTCCACAGCAA...GACACGGTGCAGGTGGTGGATGGGATGGTGCATCCTTACAAAGGGGACCGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp GGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGAAAAGAGAGTTGCTGTaGAAGGTCTGGGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: GWRRPPPWPQRSHSPLVRKRELL*KVWACS
Trigger: GCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTT...CCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp TCCTTGAGCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGAGGCCAGCAGGATCTaGTACTCAGCCCGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SLSPAGRGSYNMQAITYEEASRI*YSARVP
Trigger: GGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTC...TTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGCTCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCGCCGGCCACCCCCTTaGCCCCAAAGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: GRGSYNMQAITYEGLCFQRRPPP*PQRSHS
Trigger: TGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCG...CTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GACCCTCTTATTGGCTGCCTTGCAGTACTCGGCCCGGTCCCCTTTGTAAGGATGACAGCCAGAGGCCTTTaGCGTGGAACGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: DPLIGCLAVLGPVPFVRMTARGL*RGTSSP
Trigger: GGGGCTGGACGTTCCACGCCAAAGGCCTCTGGCTGT...CATCCTTACAAAGGGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp AGCCCAGCTCTGCAGAGGGCGGGGAGTGTGAGGACCCCACCCTTCCTGCCAGCCACAGATTTAAACGGATaGAACCCGAGGGCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: SPALQRAGSVRTPPFLPATDLNG*NPRALA
Trigger: AGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGT...GGCTGGCAGGAAGGGTGGGGTCCTCACACTCCCCGCCCTCTGCAGAGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTTGGCTACCTGGAACCAGGTTTCTaGTCCACTGGAACCGGTGCA +
Preference number: 4 (lower is better)
Translates to: QRTCPQVEGCHHDPPLGYLEPGF*STGTGA
Trigger: TGCACCGGTTCCAGTGGATCAGAAACCTGGTTCCAG...GTAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS-3UTR TCA 90 bp CCACCCTTCCTGCCAGCCCCTCCCTCACTTACTGGCAGCACACCTGACCCTCAGTTATCTGCCCCTTCATaGGCTCGAAAAACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: PPFLPAPPSLTGSTPDPQLSAPS*ARKTLP
Trigger: CGGCAGAGTTTTTCGAGCTCATGAAGGGGCAGATAA...CTGAGGGTCAGGTGTGCTGCCAGTAAGTGAGGGAGGGGCTGGCAGGAAGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262764.11
CDS-3UTR TCA 90 bp ATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTCATCGGTCCTGGCGGTTGGTaGAGTAGGAGTCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: IAEARLKELTPAMPVIFIGPGGW*SRSHSG
Trigger: ACCTGAGTGACTCCTACTTCACCAACCGCCAGGACC...GATGAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000588169.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCGCCATTCACCTCTGGTaGGGCCAGCAGGATCTGGTA +
Preference number: 4 (lower is better)
Translates to: RDGVVTTCRPSPTKASASAIHLW*GQQDLV
Trigger: TACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGC...GGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp TGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCTGAAGAGCTCGAAAAACTCTaGCGGGGAAGAAAGCACCCT +
Preference number: 4 (lower is better)
Translates to: CRPSPTKASASSRGSWPEELEKL*RGRKHP
Trigger: AGGGTGCTTTCTTCCCCGGCAGAGTTTTTCGAGCTC...TTCAGGCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR GCA 90 bp GTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCCCCCAGGTAGAGGGATaGCATCACGACCCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VVTTCRPSPTKASASSRGPQVEG*HHDPPL
Trigger: AAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGG...GCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589425.5
CDS-3UTR GCA 90 bp TTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGTGGGAGCAGCATTGTaGGGGAGTTCTTCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LQHAGHHLRRPLLPAVAAVGAAL*GSSSGL
Trigger: GAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCAC...AGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCAGGTACACCTTAATGTaGTGGAGGCCGATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: QHAGHHLRRPLLPAVAAGRYTLM*WRPMVS
Trigger: CGAGACCATCGGCCTCCAGCACATTAAGGTGTACCT...GCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CTGGTGAGGCCAGCAGGATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCAAGGTACACCTTAATGTaGTGGAGGCCGATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: LVRPAGSGTQPECPRPGPRYTLM*WRPMVS
Trigger: CGAGACCATCGGCCTCCAGCACATTAAGGTGTACCT...TGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp CGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCTCTTATTGGCTGCCTTaGAGTACTCGGCCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: RDGVVTTCRPSPTKASASSYWLP*STRPGP
Trigger: GGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGA...GGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCGGTACTCAGCCCGAGTaGCCAAGACCAGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: RDGVVTTCRPSPTKASASGTQPE*PRPGPC
Trigger: ACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACC...GGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCGGTACTCAGCCCGAGTaGCCAAGACCAGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: AGRGSYNMQAITYEGLCFGTQPE*PRPGPC
Trigger: ACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACC...GAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GATCAAAGAGCCCTCTGGAAGCTCTGGTTGAGTCAGAACAACCACCTGCCCCACACCTGGCGACTCGGCTaGTCGAAGGTGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: DQRALWKLWLSQNNHLPHTWRLG*SKVAED
Trigger: GTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGT...GTGGGGCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGCTCTTTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR GCA 90 bp CATGTAGGCCTGGGTCAGGTTGAAATAGCCAGTGGTGAGGTAGACCTTTGCCCCACCTGGCGACTCGGCTaGTCGAAGGTGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: HVGLGQVEIASGEVDLCPTWRLG*SKVAED
Trigger: GTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGT...GGGGCAAAGGTCTACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp TTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTTCCTTGAGCCCAGCGGGACCTACGAAGGCCTCTaGTTCCAGCCGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LNGWNPRALAELFLEPSGTYEGL*FQPWQL
Trigger: CAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGT...CCCGCTGGGCTCAAGGAACAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CAGACTGGAGTCATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTAGGTTTCTGATCCACTaGAACCGGTGCACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: QTGVIAEARLKELTPAMPRFLIH*NRCTPS
Trigger: AGAAGGCGTGCACCGGTTCCAGTGGATCAGAAACCT...AGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGATGACTCCAGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000588169.5
ENST00000589426.5
CDS-3UTR CCA 90 bp TTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTTGGCTCACGACCCGCCTCTTaGCTACTCTTATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: FQRTCPQVEGCHHDPPLGSRPAS*LLLSAP
Trigger: AGGGGCAGATAAGAGTAGCCAAGAGGCGGGTCGTGA...GCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586510.6
ENST00000589425.5
CDS-3UTR CCA 90 bp GCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTTTGCTGTGGAAGGTCTaGGCATGCAGCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AQRDGVVTTCRPSPTKASLLWKV*ACSICW
Trigger: CCAGCAGATGCTGCATGCCCAGACCTTCCACAGCAA...AGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCTGAAGAAAAGAGAGTTGCTGTaGAAGGTCTGGGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: AGHHLRRPLLPAVAAGLKKRELL*KVWACS
Trigger: GCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTT...CTTCAGGCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GATCAAAGAGCCCTCTGGAAGCTCTGGTTGAGTCAGAACAACCACCTGCCCCACGAGGCCAGCAGGATCTaGTACTCAGCCCGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: DQRALWKLWLSQNNHLPHEASRI*YSARVP
Trigger: GGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTC...GTGGGGCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGCTCTTTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586019.1
CDS-3UTR CCA 90 bp GATCAAAGAGCCCTCTGGAAGCTCTGGTTGAGTCAGAACAACCACCTGCCCCACCGCCGGCCACCCCCTTaGCCCCAAAGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: DQRALWKLWLSQNNHLPHRRPPP*PQRSHS
Trigger: TGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCG...GTGGGGCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGCTCTTTGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586019.1
CDS-3UTR CCA 90 bp ATCCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTGCACATAGGCCGCTaGGATGGCGCCGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: IQLLTLRTAAIPLKMLLCVHIGR*DGAGHP
Trigger: GGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCAC...ACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586019.1
CDS-3UTR CCA 90 bp TTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTTCCTTGAGCCCAGCGGGTGCTGCTGCAGGGCCTaGTTCTCCGTCACGATCGCA +
Preference number: 4 (lower is better)
Translates to: LNGWNPRALAELFLEPSGCCCRA*FSVTIA
Trigger: TGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCA...CCCGCTGGGCTCAAGGAACAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CAAAGAGCCCTCTGGAAGCTCTGGTTGAGTCAGAACAACCACCTGCCCCACCTGTCGGCTGCTCGAAGGTaGCAGAGGACACCACACCTG +
Preference number: 4 (lower is better)
Translates to: QRALWKLWLSQNNHLPHLSAARR*QRTPHL
Trigger: CAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGA...CAGGTGGGGCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGCTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR CCA 90 bp TCCTTGAGCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAATCGGCTGCTCGAAGGTaGCAGAGGACACCACACCTG +
Preference number: 4 (lower is better)
Translates to: SLSPAGRGSYNMQAITYESAARR*QRTPHL
Trigger: CAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGA...TTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGCTCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp ATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTCATCGGCTGCACACCTCACTaGAGAACTGTCGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: IAEARLKELTPAMPVIFIGCTPH*RTVARC
Trigger: ACATCGAGCGACAGTTCTTCAGTGAGGTGTGCAGCC...GATGAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262764.11
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CTTTGTAAGGATGCACCATCCCATCCACCACCTGCACCGTGTCGTCCCCCTGCACAGTCCCGCTCAAGATaGCGCTGTTGTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LCKDAPSHPPPAPCRPPAQSRSR*RCCRRG
Trigger: ACCTCTTCGACAACAGCGTCATCTTGAGCGGGACTG...TGCAGGGGGACGACACGGTGCAGGTGGTGGATGGGATGGTGCATCCTTACAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR GCA 90 bp AGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACACCACACCTGACGGGTCAAAAGAGAGTTaGTGTGGAAGGTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SFTWRLGCSKVAEDTTPDGSKES*CGRSGH
Trigger: ATGCCCAGACCTTCCACAGCAACTCTCTTTTGACCC...GTCAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp TTCCTGCCAGCCCCTCCCTCACTTACTGGCAGCACACCTGACCCTCAGCCATACATCCCCAGCAGCTGCTaGATCTTCCTGGGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: FLPAPPSLTGSTPDPQPYIPSSC*IFLGQK
Trigger: CTTTTGACCCAGGAAGATGCAGCAGCTGCTGGGGAT...GTATGGCTGAGGGTCAGGTGTGCTGCCAGTAAGTGAGGGAGGGGCTGGCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCATGTAGGCCTGGGTCAGATCCCCAGCAGCTGCTaGATCTTCCTGGGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: DLVLSPSAQDQVHVGLGQIPSSC*IFLGQK
Trigger: CTTTTGACCCAGGAAGATGCAGCAGCTGCTGGGGAT...CTGACCCAGGCCTACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp TCCTTGAGCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGTACTCAGCCCGAGTaGCCAAGACCAGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: SLSPAGRGSYNMQAITYEGTQPE*PRPGPC
Trigger: ACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACC...TTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGCTCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CATGTAGGCCTGGGTCAGGTTGAAATAGCCAGTGGTGAGGTAGACCTTTGCCCCGAACCTCCGCAGGAGTaGGAGCAGCATTGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: HVGLGQVEIASGEVDLCPEPPQE*EQHCAG
Trigger: TCCCGCACAATGCTGCTCCCACTCCTGCGGAGGTTC...GGGGCAAAGGTCTACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp CAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCAAAAGAGAGTTGCTGTaGAAGGTCTGGGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: QHAGHHLRRPLLPAVAAGKRELL*KVWACS
Trigger: GCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTT...GCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCGCTGCTGCATCTTCCTaGGTCAAAAGAGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QHAGHHLRRPLLPAVAAGAAASS*VKRELL
Trigger: CAGCAACTCTCTTTTGACCCAGGAAGATGCAGCAGC...GCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp TCTGAAAATGCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGGTGCACATAGGCCGCTaGGATGGCGCCGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: SENATDLNGWNPRALAELVHIGR*DGAGHP
Trigger: GGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCAC...CAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGCATTTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CCGCTCAAGATGACGCTGTTGTCGAAGAGGTACACCTTAATGTGCTGGAGGCCGTGCTGCTGCAGGGCCTaGTTCTCCGTCACGATCGCA +
Preference number: 4 (lower is better)
Translates to: PLKMTLLSKRYTLMCWRPCCCRA*FSVTIA
Trigger: TGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCA...CGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAACAGCGTCATCTTGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp GTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCTGGCCTGAAGCCTTTTaGGGTAGAGCCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VVTTCRPSPTKASASSRGWPEAF*GRAQLC
Trigger: GCAGAGCTGGGCTCTACCCCAAAAGGCTTCAGGCCA...GCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGACAGATTTAAACGGATaGAACCCGAGGGCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: GWRRPPPWPQRSHSPLVRTDLNG*NPRALA
Trigger: AGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGT...CCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR CCA 90 bp TTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATGAGGCTCTGCCCCTCCTGCGCTaGCGGTCCCGGTTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: FSWSYDFLPLTLRLTDEALPLLR*RSRFLP
Trigger: CGGCAGGAACCGGGACCGCCAGCGCAGGAGGGGCAG...AGCCTCATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
3UTR CAA 72 bp AGGTACACCTTAATGTGCTGGAGGCCGATGGTCTCGTaGAAGCGCTCAGGGATGAGGAGCCGAAGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RYTLMCWRPMVS*KRSGMRSRSSP
Trigger: TGGGCTGCTTCGGCTCCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCTCCAGCACATTAAGGTGTACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp AGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTTGGCTACTCTTTATCTGCCCCTTCATaGGCTCGAAAAACTCTGCCG +
Preference number: 4 (lower is better)
Translates to: RTCPQVEGCHHDPPLGYSLSAPS*ARKTLP
Trigger: CGGCAGAGTTTTTCGAGCTCATGAAGGGGCAGATAA...AGAGTAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS-3UTR TCA 90 bp GATCAAAGAGCCCTCTGGAAGCTCTGGTTGAGTCAGAACAACCACCTGCCCCACGCCATTCACCTCTGGTaGGGCCAGCAGGATCTGGTA +
Preference number: 4 (lower is better)
Translates to: DQRALWKLWLSQNNHLPHAIHLW*GQQDLV
Trigger: TACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGC...GTGGGGCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGCTCTTTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586019.1
CDS-3UTR TCA 90 bp CCGCTCAAGATGACGCTGTTGTCGAAGAGGTACACCTTAATGTGCTGGAGGCCGGCCATTCACCTCTGGTaGGGCCAGCAGGATCTGGTA +
Preference number: 4 (lower is better)
Translates to: PLKMTLLSKRYTLMCWRPAIHLW*GQQDLV
Trigger: TACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGC...CGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAACAGCGTCATCTTGAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp GTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCGGCTGCACACCTCACTaGAGAACTGTCGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: VVTTCRPSPTKASASSRGGCTPH*RTVARC
Trigger: ACATCGAGCGACAGTTCTTCAGTGAGGTGTGCAGCC...GCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp GCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGGTCCCGGTGAACTaGCCTGTACCCAAAATTAGG +
Preference number: 4 (lower is better)
Translates to: AGRGSYNMQAITYEGLCFQVPVN*PVPKIR
Trigger: CCTAATTTTGGGTACAGGTCAGTTCACCGGGACCTG...GAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589425.5
CDS-3UTR TCA 90 bp CCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTGCCTCCAGGTCCCGGTaGACTGACCTTTGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: PASNFEDSCHTPEDAALCASRSR*TDLWRG
Trigger: TCCACGCCAAAGGTCAGTTCACCGGGACCTGGAGGC...ACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586355.1
CDS-3UTR GCA 90 bp CCACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGAGAGCTCGAAAAACTCTaGCGGGGAAGAAAGCACCCT +
Preference number: 4 (lower is better)
Translates to: PPAPVPKDLSPGRGMPSRELEKL*RGRKHP
Trigger: AGGGTGCTTTCTTCCCCGGCAGAGTTTTTCGAGCTC...TCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS-3UTR GCA 90 bp CATCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGAGGGTCAAAAGAGAGTTaGTGTGGAAGGTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: HLHPQLHLATRLLEGGRGGSKES*CGRSGH
Trigger: ATGCCCAGACCTTCCACAGCAACTCTCTTTTGACCC...TCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CGGGAGTTCTTCCGGCCTCGTGAGCCCCGCGTGAAGTCTAAGAGAATGGAGACCGGGTCAAAAGAGAGTTaGTGTGGAAGGTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: REFFRPREPRVKSKRMETGSKES*CGRSGH
Trigger: ATGCCCAGACCTTCCACAGCAACTCTCTTTTGACCC...GGTCTCCATTCTCTTAGACTTCACGCGGGGCTCACGAGGCCGGAAGAACTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp GCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTTCCTTGAGTGTCAGGGGCTGGTCTaGGATCCCCAGCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ATDLNGWNPRALAELFLECQGLV*DPQQLL
Trigger: CAGCAGCTGCTGGGGATCGCAGACCAGCCCCTGACA...CTCAAGGAACAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTTCCTTGAGCAGCCATACTGTCCCTaGAGGGGCTCGCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: ATDLNGWNPRALAELFLEQPYCP*RGSLGH
Trigger: GTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTG...CTCAAGGAACAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp CCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTGGGGTAGTTACAACATaGAGGCCATCACCTACGAAG +
Preference number: 4 (lower is better)
Translates to: PVPKDLSPGRGMPSRPASGVVTT*RPSPTK
Trigger: CTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCC...AGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR GCA 90 bp TTCCTGCCAGCCCCTCCCTCACTTACTGGCAGCACACCTGACCCTCAGCCATACGGGGTAGTTACAACATaGAGGCCATCACCTACGAAG +
Preference number: 4 (lower is better)
Translates to: FLPAPPSLTGSTPDPQPYGVVTT*RPSPTK
Trigger: CTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCC...GTATGGCTGAGGGTCAGGTGTGCTGCCAGTAAGTGAGGGAGGGGCTGGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp TTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATGAGGCTGGTGACCTCCTGCGCTaGCGGTCCCGGTTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: FSWSYDFLPLTLRLTDEAGDLLR*RSRFLP
Trigger: CGGCAGGAACCGGGACCGCCAGCGCAGGAGGTCACC...AGCCTCATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR CCA 90 bp GTCCACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACAGGTTTCTGATCCACTaGAACCGGTGCACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VHQLLFQRTCPQVEGCHHRFLIH*NRCTPS
Trigger: AGAAGGCGTGCACCGGTTCCAGTGGATCAGAAACCT...GTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS-3UTR CCA 90 bp AGCCCAGCTCTGCAGAGGGCGGGGAGTGTGAGGACCCCACCCTTCCTGCCAGCCGAAGGAAACTTTGCTTaGAGTGACTTTTCTAGAGTA +
Preference number: 4 (lower is better)
Translates to: SPALQRAGSVRTPPFLPAEGNFA*SDFSRV
Trigger: TACTCTAGAAAAGTCACTCCAAGCAAAGTTTCCTTC...GGCTGGCAGGAAGGGTGGGGTCCTCACACTCCCCGCCCTCTGCAGAGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CGCGTCCACCAGCTCCGTGAAGAAGTCGGCAATCTCCGCACAGTCCTGCAGGAATACACCTTAATGTGCTaGAGGCCGATGGTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: RVHQLREEVGNLRTVLQEYTLMC*RPMVSL
Trigger: CAACGAGACCATCGGCCTCCAGCACATTAAGGTGTA...TTCCTGCAGGACTGTGCGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACGCG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR CCA 90 bp ACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGTACACCTTAATGTGCTaGAGGCCGATGGTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: TTCRPSPTKASASSRGSWYTLMC*RPMVSL
Trigger: CAACGAGACCATCGGCCTCCAGCACATTAAGGTGTA...CCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CATCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGAAAAAGAGAGTTGCTGTaGAAGGTCTGGGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: HLHPQLHLATRLLEGGRGKRELL*KVWACS
Trigger: GCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTT...TCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp ATCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACGCTGCTGCATCTTCCTaGGTCAAAAGAGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: IFTHSFTWRLGCSKVAEDAAASS*VKRELL
Trigger: CAGCAACTCTCTTTTGACCCAGGAAGATGCAGCAGC...GTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp TCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACAGCTGCTGCATCTTCCTaGGTCAAAAGAGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSPTASPGDSAARRWQRTAAASS*VKRELL
Trigger: CAGCAACTCTCTTTTGACCCAGGAAGATGCAGCAGC...TGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp TCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTCATAGGCCGCTGGGATaGCGCCGGCCACCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SNFEDSCHTPEDAALCLTHRPLG*RRPPPW
Trigger: CCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATG...AGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586019.1
CDS-3UTR CCA 90 bp GGAGTCACTCAGGTTTGCACCGCTCAAGATGACGCTGTTGTCGAAGAGGTACACTCGGCTGCTCGAAGGTaGCAGAGGACACCACACCTG +
Preference number: 4 (lower is better)
Translates to: GVTQVCTAQDDAVVEEVHSAARR*QRTPHL
Trigger: CAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGA...GTGTACCTCTTCGACAACAGCGTCATCTTGAGCGGTGCAAACCTGAGTGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR TCA 90 bp TTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTGGTACTCACTCGTGAGCCCCGCGTaGAGTCTAAGAGAATGGAGA +
Preference number: 4 (lower is better)
Translates to: LAPKKPFTSGEASRIWYSLVSPA*SLREWR
Trigger: TCTCCATTCTCTTAGACTTCACGCGGGGCTCACGAG...TGAGTACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp AGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGTTGCACCGCTCAAGATaGCGCTGTTGTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: SYNMQAITYEGLCFQPWQLHRSR*RCCRRG
Trigger: ACCTCTTCGACAACAGCGTCATCTTGAGCGGTGCAA...CTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR TCA 90 bp GAGTCAGAACAACCACCTGCCCCACCTGTGAACTCTCGGGAAAATCGTGCTGAGGGCTGCACACCTCACTaGAGAACTGTCGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: ESEQPPAPPVNSRENRAEGCTPH*RTVARC
Trigger: ACATCGAGCGACAGTTCTTCAGTGAGGTGTGCAGCC...CTCAGCACGATTTTCCCGAGAGTTCACAGGTGGGGCAGGTGGTTGTTCTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR TCA 90 bp GCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTACTCCGCCAGTACTCCTaGAGCTGGACCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ASNFEDSCHTPEDAALCLLRQYS*SWTRSC
Trigger: GCAGGAGCGGGTCCAGCTTCAGGAGTACTGGCGGAG...TAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR TCA 90 bp CAAAGAGCCCTCTGGAAGCTCTGGTTGAGTCAGAACAACCACCTGCCCCACCTGTCTGGAAGCTCTGGTTaGGTCAGAACAACCACCTGC +
Preference number: 4 (lower is better)
Translates to: QRALWKLWLSQNNHLPHLSGSSG*VRTTTC
Trigger: GCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGA...CAGGTGGGGCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGCTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR GCA 90 bp CTTCATCAAGGCCATTCCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTGCCATGGTGACCTCCTaGGCTGGCGGTCCCGGTTCC +
Preference number: 4 (lower is better)
Translates to: LHQGHSCLSSEEVLDQWSAMVTS*AGGPGS
Trigger: GGAACCGGGACCGCCAGCGCAGGAGGTCACCATGGC...ACTCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGAATGGCCTTGATGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589426.5
CDS-3UTR GCA 90 bp CAGGTCCATGTAGGCCTGGGTCAGGTTGAAATAGCCAGTGGTGAGGTAGACCTTGACCCTCTTATTGGCTaGCTTGCAGTACTCGGCCCG +
Preference number: 4 (lower is better)
Translates to: QVHVGLGQVEIASGEVDLDPLIG*LAVLGP
Trigger: CGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTC...AAGGTCTACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTACATGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR GCA 90 bp GGAGTGGGTACCAGATGGAAAGTGAACAGACTGCCTAATTTAGCATCCAGCTTCAGCTGGACCCGCTCCTaGTGTCCCAGGCTGCACACC +
Preference number: 4 (lower is better)
Translates to: GVGTRWKVNRLPNLASSFSWTRS*CPRLHT
Trigger: GGTGTGCAGCCTGGGACAGCAGGAGCGGGTCCAGCT...GAAGCTGGATGCTAAATTAGGCAGTCTGTTCACTTTCCATCTGGTACCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586355.1
CDS-3UTR GCA 90 bp TTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATGAGGCTGGGCAGGCTGCTCCCTaGCAGGTACAGCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: FSWSYDFLPLTLRLTDEAGQAAP*QVQPEA
Trigger: GGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCC...AGCCTCATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589425.5
CDS-3UTR GCA 90 bp GAGTCAGAACAACCACCTGCCCCACCTGTGAACTCTCGGGAAAATCGTGCTGAGGTCAGAACAACCACCTaGCCCACCTGTGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: ESEQPPAPPVNSRENRAEVRTTT*PTCELS
Trigger: CGAGAGTTCACAGGTGGGGCAGGTGGTTGTTCTGAC...CTCAGCACGATTTTCCCGAGAGTTCACAGGTGGGGCAGGTGGTTGTTCTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR CCA 90 bp GGCTCTGAAAATGCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGGACTCGGACCTGCTCTaGGAACCTCCGCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GSENATDLNGWNPRALAEDSDLL*EPPQEW
Trigger: CCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTC...CTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGCATTTTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp AGCATCCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTCGGCTGCTCGAAGGTaGCAGAGGACACCACACCTG +
Preference number: 4 (lower is better)
Translates to: SIQLLTLRTAAIPLKMLLSAARR*QRTPHL
Trigger: CAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGA...GAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR CCA 90 bp CCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTACCCACAGCTTCACCTaGCGACTCGGCTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PASNFEDSCHTPEDAALCTHSFT*RLGCSK
Trigger: CTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGT...ACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR CCA 90 bp AGCATCCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCACCCACAGCTTCACCTaGCGACTCGGCTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: SIQLLTLRTAAIPLKMLLTHSFT*RLGCSK
Trigger: CTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGT...GAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR TCA 90 bp GCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGCTGAGAGAATGGAGACCTTaGGATTTGAAGGAAACTTTG +
Preference number: 4 (lower is better)
Translates to: AILSLQGLAGTPRLESSLREWRP*DLKETL
Trigger: CAAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCT...CAGCGATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp GCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTTCCTTGAGGGTCCTGGCGGTTGGTaGAGTAGGAGTCACTCAGGT +
Preference number: 4 (lower is better)
Translates to: ATDLNGWNPRALAELFLEGPGGW*SRSHSG
Trigger: ACCTGAGTGACTCCTACTTCACCAACCGCCAGGACC...CTCAAGGAACAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR TCA 90 bp CAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCACAATCTCATCGATTTaGATCTCGAAGGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: QHAGHHLRRPLLPAVAAGTISSI*ISKGFI
Trigger: GATGAAGCCCTTCGAGATTCAAATCGATGAGATTGT...GCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CTGGTGAGGCCAGCAGGATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCAACAATCTCATCGATTTaGATCTCGAAGGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: LVRPAGSGTQPECPRPGPTISSI*ISKGFI
Trigger: GATGAAGCCCTTCGAGATTCAAATCGATGAGATTGT...TGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp CTCAGCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCTCAACAGGGTCTCAGTaGCAATCTCATCGATTTGAA +
Preference number: 4 (lower is better)
Translates to: LSHTVPAGARWDTQTGVISTGSQ*QSHRFE
Trigger: TTCAAATCGATGAGATTGTCACTGAGACCCTGTTGA...GATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp TCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTCTCCGCCAGTACTCCTaGAGCTGGACCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SNFEDSCHTPEDAALCLTLRQYS*SWTRSC
Trigger: GCAGGAGCGGGTCCAGCTTCAGGAGTACTGGCGGAG...AGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR TCA 90 bp AGAGACAGCACCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTCACCATGAGAGCCAATCAGCGTaGGACAGGGCAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RDSTCLSSEEVLDQWSHHESQSA*DRAGCS
Trigger: GGAGCAGCCTGCCCTGTCTCACGCTGATTGGCTCTC...ATGGTGACTCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGTGCTGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR TCA 90 bp AAGGCCATTCCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTCACCATCTGCTCTTGCTCCTGGTaGAGCTGCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KAIPVCPQKKFLISGVTICSCSW*SCCCRA
Trigger: GGCCCTGCAGCAGCAGCTTCACCAGGAGCAAGAGCA...GATGGTGACTCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGAATGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp AAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTTGGCTACTCTTGGCTACTCTTATCTaGCCCTTCATGAGCTCGAAA +
Preference number: 4 (lower is better)
Translates to: KDLSPGRGMPSRPASWLLLATLI*PFMSSK
Trigger: TTTCGAGCTCATGAAGGGGCAGATAAGAGTAGCCAA...GAGTAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS-3UTR GCA 90 bp GGCTCTGAAAATGCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGTGGAAGGTCTGGGCATaGAGCATCTGCTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GSENATDLNGWNPRALAEWKVWA*SICWRV
Trigger: GACCCGCCAGCAGATGCTGCATGCCCAGACCTTCCA...CTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGCATTTTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp TTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTTCCTTGAGCCCAGCGGGGGGTCAAAAGAGAGTTaGTGTGGAAGGTCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LNGWNPRALAELFLEPSGGSKES*CGRSGH
Trigger: ATGCCCAGACCTTCCACAGCAACTCTCTTTTGACCC...CCCGCTGGGCTCAAGGAACAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACCTGGCGACTCGGCTaGTCGAAGGTGGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: ASNFEDSCHTPEDAALCLTWRLG*SKVAED
Trigger: GTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGT...TAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR GCA 90 bp TTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGGGTAGTTACAACATaGAGGCCATCACCTACGAAG +
Preference number: 4 (lower is better)
Translates to: LQHAGHHLRRPLLPAVAAGVVTT*RPSPTK
Trigger: CTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCC...AGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp TTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTTCCTTGAGCCCAGCGGGGCTGCTGCATCTTCCTaGGTCAAAAGAGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LNGWNPRALAELFLEPSGAAASS*VKRELL
Trigger: CAGCAACTCTCTTTTGACCCAGGAAGATGCAGCAGC...CCCGCTGGGCTCAAGGAACAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp CTTCATCAAGGCCATTCCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTCCAGGTGTCAGGGGCTaGTCTGCGATCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LHQGHSCLSSEEVLDQWSPGVRG*SAIPSS
Trigger: GCTGCTGGGGATCGCAGACCAGCCCCTGACACCTGG...ACTCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGAATGGCCTTGATGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GGCTCTGAAAATGCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGTGCTGCTGCAGGGCCTaGTTCTCCGTCACGATCGCA +
Preference number: 4 (lower is better)
Translates to: GSENATDLNGWNPRALAECCCRA*FSVTIA
Trigger: TGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCA...CTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGCATTTTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTGAGAAAGGGATCTGCTGCTGCAGGGCCTaGTTCTCCGTCACGATCGCA +
Preference number: 4 (lower is better)
Translates to: DSCHTPEDAALCLTEKGICCCRA*FSVTIA
Trigger: TGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCA...GATCCCTTTCTCAGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586355.1
CDS-3UTR CCA 90 bp CCTGAAGATGCTGCTCTGTGTTTAACTGAGAAAGGGATCAAAGAGCCCTCTGGACTTGCTCCTTTGGCGTaGAACGTCCAGCCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: PEDAALCLTEKGIKEPSGLAPLA*NVQPLR
Trigger: GCGGAGGGGCTGGACGTTCCACGCCAAAGGAGCAAG...TCCAGAGGGCTCTTTGATCCCTTTCTCAGTTAAACACAGAGCAGCATCTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586019.1
CDS-3UTR CCA 90 bp GACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTGAGAAAGGGATCCTGCTCTTGCTCCTTTaGCGTGGAACGTCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: DSCHTPEDAALCLTEKGILLLLL*RGTSSP
Trigger: GGGGCTGGACGTTCCACGCCAAAGGAGCAAGAGCAG...GATCCCTTTCTCAGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586019.1
3UTR CAA 72 bp GAGTCACTCAGGTTTGCACCGCTCAAGATGACGCTGTaGTCGAAGAGGTACACCTTAATGTGCTGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: ESLRFAPLKMTL*SKRYTLMCWRP
Trigger: CGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAACAGCGTCATCTTGAGCGGTGCAAACCTGAGTGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR TCA 90 bp CCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTGGTACAATCTCATCGATTTaGATCTCGAAGGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: PPWPQRSHSPLVRPAGSGTISSI*ISKGFI
Trigger: GATGAAGCCCTTCGAGATTCAAATCGATGAGATTGT...ACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp CATCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGATCAACAGGGTCTCAGTaGCAATCTCATCGATTTGAA +
Preference number: 4 (lower is better)
Translates to: HLHPQLHLATRLLEGGRGSTGSQ*QSHRFE
Trigger: TTCAAATCGATGAGATTGTCACTGAGACCCTGTTGA...TCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp GGAGTCACTCAGGTTTGCACCGCTCAAGATGACGCTGTTGTCGAAGAGGTACACCAGGTCCCGGTGAACTaGCCTGTACCCAAAATTAGG +
Preference number: 4 (lower is better)
Translates to: GVTQVCTAQDDAVVEEVHQVPVN*PVPKIR
Trigger: CCTAATTTTGGGTACAGGTCAGTTCACCGGGACCTG...GTGTACCTCTTCGACAACAGCGTCATCTTGAGCGGTGCAAACCTGAGTGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR TCA 90 bp TGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTGAGAAAGGGATCAAAGAGTGCTCTTGCTCCTGGTaGAGCTGCTGCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CHTPEDAALCLTEKGIKECSCSW*SCCCRA
Trigger: GGCCCTGCAGCAGCAGCTTCACCAGGAGCAAGAGCA...CTCTTTGATCCCTTTCTCAGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586355.1
CDS-3UTR TCA 90 bp CTTTGTAAGGATGCACCATCCCATCCACCACCTGCACCGTGTCGTCCCCCTGCACTCAGAAGAAGTTCTTaGTCAGTGGAGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: LCKDAPSHPPPAPCRPPALRRSS*SVESPS
Trigger: AGATGGTGACTCCACTGATCAAGAACTTCTTCTGAG...TGCAGGGGGACGACACGGTGCAGGTGGTGGATGGGATGGTGCATCCTTACAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp CATGTAGGCCTGGGTCAGGTTGAAATAGCCAGTGGTGAGGTAGACCTTTGCCCCTCAAGGCCATTCCTGTaGACTCTCGGGAAAATCGTG +
Preference number: 4 (lower is better)
Translates to: HVGLGQVEIASGEVDLCPSRPFL*TLGKIV
Trigger: CACGATTTTCCCGAGAGTTCACAGGAATGGCCTTGA...GGGGCAAAGGTCTACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR GCA 90 bp GTGTATGTACACATAGGGCAGACATTACACATTAAGAATCAGGGAACTTTACTCGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGC +
Preference number: 4 (lower is better)
Translates to: VYVHIGQTLHIKNQGTLLGGPGS*RGGRTG
Trigger: GCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCC...GAGTAAAGTTCCCTGATTCTTAATGTGTAATGTCTGCCCTATGTGTACATACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp AGCATCCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCGTCAGAACAACCACCTaGCCCACCTGTGAACTCTCG +
Preference number: 4 (lower is better)
Translates to: SIQLLTLRTAAIPLKMLLVRTTT*PTCELS
Trigger: CGAGAGTTCACAGGTGGGGCAGGTGGTTGTTCTGAC...GAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR CCA 90 bp TTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATGAGGCTGAGGCCAGCAGGATCTaGTACTCAGCCCGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: FSWSYDFLPLTLRLTDEAEASRI*YSARVP
Trigger: GGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTC...AGCCTCATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp AATCTCATCGATTTGAATCTCGAAGGGCTTCATCTGAATCAGCGGATAAATCCAGTGCACATAGGCCGCTaGGATGGCGCCGGCCACCCC +
Preference number: 4 (lower is better)
Translates to: NLIDLNLEGLHLNQRINPVHIGR*DGAGHP
Trigger: GGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCAC...TGGATTTATCCGCTGATTCAGATGAAGCCCTTCGAGATTCAAATCGATGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp GACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTGAGAAAGGGATCCCAGCACAGGCGCCTTaGGACTTAGTGGAGTGGGTA +
Preference number: 4 (lower is better)
Translates to: DSCHTPEDAALCLTEKGIPAQAP*DLVEWV
Trigger: TACCCACTCCACTAAGTCCCAAGGCGCCTGTGCTGG...GATCCCTTTCTCAGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586355.1
CDS-3UTR TCA 90 bp CCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTGGTAGAGAATGGAGACCTTaGGATTTGAAGGAAACTTTG +
Preference number: 4 (lower is better)
Translates to: PPWPQRSHSPLVRPAGSGREWRP*DLKETL
Trigger: CAAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCT...ACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp TTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATGAGGCTCGTCCACCAGCTCCGTaGAGAAGTCGGCAATCTCCG +
Preference number: 4 (lower is better)
Translates to: FSWSYDFLPLTLRLTDEARPPAP*RSRQSP
Trigger: CGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACG...AGCCTCATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTCAGCTGCCATACCCCTaGAGATGCTGCTCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: PASNFEDSCHTPEDAALCQLPYP*RCCSVF
Trigger: AAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTG...ACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR GCA 90 bp GTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCTTGGCTACTCTTATCTaGCCCTTCATGAGCTCGAAA +
Preference number: 4 (lower is better)
Translates to: VVTTCRPSPTKASASSRGLATLI*PFMSSK
Trigger: TTTCGAGCTCATGAAGGGGCAGATAAGAGTAGCCAA...GCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262764.11
CDS-3UTR TCA 90 bp CTTCATCAAGGCCATTCCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTGCCATTCACCTCTGGTaGGGCCAGCAGGATCTGGTA +
Preference number: 4 (lower is better)
Translates to: LHQGHSCLSSEEVLDQWSAIHLW*GQQDLV
Trigger: TACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGC...ACTCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGAATGGCCTTGATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp GCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAGGCTGCACACCTCACTaGAGAACTGTCGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: ASNFEDSCHTPEDAALCLGCTPH*RTVARC
Trigger: ACATCGAGCGACAGTTCTTCAGTGAGGTGTGCAGCC...TAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR TCA 90 bp GATCAAAGAGCCCTCTGGAAGCTCTGGTTGAGTCAGAACAACCACCTGCCCCACCTCAGAAGAAGTTCTTaGTCAGTGGAGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: DQRALWKLWLSQNNHLPHLRRSS*SVESPS
Trigger: AGATGGTGACTCCACTGATCAAGAACTTCTTCTGAG...GTGGGGCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGCTCTTTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR TCA 90 bp GTGTATGTACACATAGGGCAGACATTACACATTAAGAATCAGGGAACTTTACTCAGAGGGCGGGGAGTGTaGGGACCCCACCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VYVHIGQTLHIKNQGTLLRGRGV*GPHPSC
Trigger: GCAGGAAGGGTGGGGTCCTCACACTCCCCGCCCTCT...GAGTAAAGTTCCCTGATTCTTAATGTGTAATGTCTGCCCTATGTGTACATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTCGGGAAAATCGTGCTaGGAGGTGATGCTAGAGACA +
Preference number: 4 (lower is better)
Translates to: PASNFEDSCHTPEDAALCSGKSC*EVMLET
Trigger: TGTCTCTAGCATCACCTCTCAGCACGATTTTCCCGA...ACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR TCA 90 bp AGCATCCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTCGGGAAAATCGTGCTaGGAGGTGATGCTAGAGACA +
Preference number: 4 (lower is better)
Translates to: SIQLLTLRTAAIPLKMLLSGKSC*EVMLET
Trigger: TGTCTCTAGCATCACCTCTCAGCACGATTTTCCCGA...GAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR TCA 90 bp TCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTCACCTGCCCCACCTGTaGACTCTCGGGAAAATCGTG +
Preference number: 4 (lower is better)
Translates to: SNFEDSCHTPEDAALCLTHLPHL*TLGKIV
Trigger: CACGATTTTCCCGAGAGTTCACAGGTGGGGCAGGTG...AGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR TCA 90 bp GACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTGAGAAAGGGATCTCTGGAAGCTCTGGTTaGGTCAGAACAACCACCTGC +
Preference number: 4 (lower is better)
Translates to: DSCHTPEDAALCLTEKGISGSSG*VRTTTC
Trigger: GCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGA...GATCCCTTTCTCAGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR TCA 90 bp GACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTGAGAAAGGGATCCAGCTGCCATACCCCTaGAGATGCTGCTCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: DSCHTPEDAALCLTEKGIQLPYP*RCCSVF
Trigger: AAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTG...GATCCCTTTCTCAGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR GCA 90 bp ATCTTCATCAAGGCCATTCCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTGGGAGCAGCATTGTaGGGGAGTTCTTCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: IFIKAIPVCPQKKFLISGVGAAL*GSSSGL
Trigger: GAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCAC...TCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGAATGGCCTTGATGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp GGCTCTGAAAATGCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGAGGTACACCTTAATGTaGTGGAGGCCGATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: GSENATDLNGWNPRALAERYTLM*WRPMVS
Trigger: CGAGACCATCGGCCTCCAGCACATTAAGGTGTACCT...CTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGCATTTTCAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR GCA 90 bp TGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTGAGAAAGGGATCAAAGAGGGTACTCAGCCCGAGTaGCCAAGACCAGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: CHTPEDAALCLTEKGIKEGTQPE*PRPGPC
Trigger: ACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACC...CTCTTTGATCCCTTTCTCAGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586019.1
CDS-3UTR CCA 90 bp CGGGAGTTCTTCCGGCCTCGTGAGCCCCGCGTGAAGTCTAAGAGAATGGAGACCGAAGGAAACTTTGCTTaGAGTGACTTTTCTAGAGTA +
Preference number: 4 (lower is better)
Translates to: REFFRPREPRVKSKRMETEGNFA*SDFSRV
Trigger: TACTCTAGAAAAGTCACTCCAAGCAAAGTTTCCTTC...GGTCTCCATTCTCTTAGACTTCACGCGGGGCTCACGAGGCCGGAAGAACTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp GCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGTTCCTTGAGTACACCTTAATGTGCTaGAGGCCGATGGTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: ATDLNGWNPRALAELFLEYTLMC*RPMVSL
Trigger: CAACGAGACCATCGGCCTCCAGCACATTAAGGTGTA...CTCAAGGAACAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp ACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGTCTGTAATTTTTAGCTaGAGTTATGACTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: TTCRPSPTKASASSRGSWSVIFS*SYDFLP
Trigger: TGGCAGGAAGTCATAACTCCAGCTAAAAATTACAGA...CCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTTCTGTAATTTTTAGCTaGAGTTATGACTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: AQRDGVVTTCRPSPTKASSVIFS*SYDFLP
Trigger: TGGCAGGAAGTCATAACTCCAGCTAAAAATTACAGA...AGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTGAGAAAGGGATCGCCCTCTGGAAGCTCTaGTTGAGTCAGAACAACCAC +
Preference number: 4 (lower is better)
Translates to: DSCHTPEDAALCLTEKGIALWKL*LSQNNH
Trigger: GTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGC...GATCCCTTTCTCAGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR TCA 90 bp TTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTAGAGAATGGAGACCTTaGGATTTGAAGGAAACTTTG +
Preference number: 4 (lower is better)
Translates to: LQHAGHHLRRPLLPAVAAREWRP*DLKETL
Trigger: CAAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCT...AGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp TTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATGAGGCTCTCGTGAGCCCCGCGTaGAGTCTAAGAGAATGGAGA +
Preference number: 4 (lower is better)
Translates to: FSWSYDFLPLTLRLTDEALVSPA*SLREWR
Trigger: TCTCCATTCTCTTAGACTTCACGCGGGGCTCACGAG...AGCCTCATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CTTCATCAAGGCCATTCCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTCTCGTGAGCCCCGCGTaGAGTCTAAGAGAATGGAGA +
Preference number: 4 (lower is better)
Translates to: LHQGHSCLSSEEVLDQWSLVSPA*SLREWR
Trigger: TCTCCATTCTCTTAGACTTCACGCGGGGCTCACGAG...ACTCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGAATGGCCTTGATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp CATGTAGGCCTGGGTCAGGTTGAAATAGCCAGTGGTGAGGTAGACCTTTGCCCCTCAACAGGGTCTCAGTaGCAATCTCATCGATTTGAA +
Preference number: 4 (lower is better)
Translates to: HVGLGQVEIASGEVDLCPSTGSQ*QSHRFE
Trigger: TTCAAATCGATGAGATTGTCACTGAGACCCTGTTGA...GGGGCAAAGGTCTACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR TCA 90 bp TCTGAAAATGCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGCAGGTCCCGGTGAACTaGCCTGTACCCAAAATTAGG +
Preference number: 4 (lower is better)
Translates to: SENATDLNGWNPRALAELQVPVN*PVPKIR
Trigger: CCTAATTTTGGGTACAGGTCAGTTCACCGGGACCTG...CAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGCATTTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589425.5
CDS-3UTR TCA 90 bp GGAGTCACTCAGGTTTGCACCGCTCAAGATGACGCTGTTGTCGAAGAGGTACACCTCAGAAGAAGTTCTTaGTCAGTGGAGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: GVTQVCTAQDDAVVEEVHLRRSS*SVESPS
Trigger: AGATGGTGACTCCACTGATCAAGAACTTCTTCTGAG...GTGTACCTCTTCGACAACAGCGTCATCTTGAGCGGTGCAAACCTGAGTGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR GCA 90 bp GTAATTTTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATACCGTGTCGTCCCCCTaGAGCTGCAGGGACACATCC +
Preference number: 4 (lower is better)
Translates to: VIFSWSYDFLPLTLRLTDTVSSP*SCRDTS
Trigger: GGATGTGTCCCTGCAGCTGCAGGGGGACGACACGGT...ATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAAAATTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp AATCTCATCGATTTGAATCTCGAAGGGCTTCATCTGAATCAGCGGATAAATCCAGAGGCCAGCAGGATCTaGTACTCAGCCCGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: NLIDLNLEGLHLNQRINPEASRI*YSARVP
Trigger: GGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTC...TGGATTTATCCGCTGATTCAGATGAAGCCCTTCGAGATTCAAATCGATGAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp GGAGTGGGTACCAGATGGAAAGTGAACAGACTGCCTAATTTAGCATCCAGCTTCGCCCTCTGGAAGCTCTaGTTGAGTCAGAACAACCAC +
Preference number: 4 (lower is better)
Translates to: GVGTRWKVNRLPNLASSFALWKL*LSQNNH
Trigger: GTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGC...GAAGCTGGATGCTAAATTAGGCAGTCTGTTCACTTTCCATCTGGTACCCACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586355.1
CDS-3UTR TCA 90 bp CCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTCTCAGAAGAAGTTCTTaGTCAGTGGAGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: PASNFEDSCHTPEDAALCLRRSS*SVESPS
Trigger: AGATGGTGACTCCACTGATCAAGAACTTCTTCTGAG...ACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR TCA 90 bp GTGATGCTAGAGACAGCACCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGATCGGGAAAATCGTGCTaGGAGGTGATGCTAGAGACA +
Preference number: 4 (lower is better)
Translates to: VMLETAPVCPQKKFLISGSGKSC*EVMLET
Trigger: TGTCTCTAGCATCACCTCTCAGCACGATTTTCCCGA...TCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGTGCTGTCTCTAGCATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR TCA 90 bp CCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTGCTCTGTGTTTAACTaGGAAAGGGATCAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PASNFEDSCHTPEDAALCCSVFN*ERDQRA
Trigger: GGCTCTTTGATCCCTTTCTCAGTTAAACACAGAGCA...ACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR GCA 90 bp GACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTGAGAAAGGGATCAACTTTGAGGACAGCTaGCATACCCCTGAAGATGCT +
Preference number: 4 (lower is better)
Translates to: DSCHTPEDAALCLTEKGINFEDS*HTPEDA
Trigger: AGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTT...GATCCCTTTCTCAGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR CCA 90 bp TACTCTGTAATTTTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGGAACCTCCGCAGGAGTaGGAGCAGCATTGTGCGGGA +
Preference number: 4 (lower is better)
Translates to: YSVIFSWSYDFLPLTLRLEPPQE*EQHCAG
Trigger: TCCCGCACAATGCTGCTCCCACTCCTGCGGAGGTTC...CAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAAAATTACAGAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp AGTGACTTTTCTAGAGTACTTTCCAGGCAGTCCACCTTCATGAGCTCGAAAAACTTGCTGTGGAAGGTCTaGGCATGCAGCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SDFSRVLSRQSTFMSSKNLLWKV*ACSICW
Trigger: CCAGCAGATGCTGCATGCCCAGACCTTCCACAGCAA...GTTTTTCGAGCTCATGAAGGTGGACTGCCTGGAAAGTACTCTAGAAAAGTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR CCA 90 bp GTAATTTTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATTGCTGCTGCAGGGCCTaGTTCTCCGTCACGATCGCA +
Preference number: 4 (lower is better)
Translates to: VIFSWSYDFLPLTLRLTDCCCRA*FSVTIA
Trigger: TGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCA...ATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAAAATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GTAATTTTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATACCCACAGCTTCACCTaGCGACTCGGCTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: VIFSWSYDFLPLTLRLTDTHSFT*RLGCSK
Trigger: CTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGT...ATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAAAATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CCA 90 bp GCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAGGAGTGGGTACCAGATaGAAAGTGAACAGACTGCCT +
Preference number: 4 (lower is better)
Translates to: ASNFEDSCHTPEDAALCLGVGTR*KVNRLP
Trigger: AGGCAGTCTGTTCACTTTCCATCTGGTACCCACTCC...TAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586355.1
CDS-3UTR TCA 90 bp AATAGGGCGAGTAGAAATAATAGCAGTCTGGTTAAAGGCAATATTTATATGCACAGCAAGGTGGGGAGGTaGCCTGGGGAACAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NRASRNNSSLVKGNIYMHSKVGR*PGEQLG
Trigger: CCCCAGCTGTTCCCCAGGTCACCTCCCCACCTTGCT...GTGCATATAAATATTGCCTTTAACCAGACTGCTATTATTTCTACTCGCCCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262764.11
CDS-3UTR TCA 90 bp ATCCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTTGCTCTGTGTTTAACTaGGAAAGGGATCAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: IQLLTLRTAAIPLKMLLCCSVFN*ERDQRA
Trigger: GGCTCTTTGATCCCTTTCTCAGTTAAACACAGAGCA...ACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR CCA 90 bp TTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGCCAGCAGGATCTGGTACTCAGAAGGAAACTTTGCTTaGAGTGACTTTTCTAGAGTA +
Preference number: 4 (lower is better)
Translates to: LAPKKPFTSGEASRIWYSEGNFA*SDFSRV
Trigger: TACTCTAGAAAAGTCACTCCAAGCAAAGTTTCCTTC...TGAGTACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp CTTCATCAAGGCCATTCCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTTACACCTTAATGTGCTaGAGGCCGATGGTCTCGTTG +
Preference number: 4 (lower is better)
Translates to: LHQGHSCLSSEEVLDQWSYTLMC*RPMVSL
Trigger: CAACGAGACCATCGGCCTCCAGCACATTAAGGTGTA...ACTCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGAATGGCCTTGATGAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp AATAGGGCGAGTAGAAATAATAGCAGTCTGGTTAAAGGCAATATTTATATGCACGAGAGCCAATCAGCGTaGGACAGGGCAGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NRASRNNSSLVKGNIYMHESQSA*DRAGCS
Trigger: GGAGCAGCCTGCCCTGTCTCACGCTGATTGGCTCTC...GTGCATATAAATATTGCCTTTAACCAGACTGCTATTATTTCTACTCGCCCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262764.11
CDS-3UTR TCA 90 bp TACTCTGTAATTTTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGTTGCACCGCTCAAGATaGCGCTGTTGTCGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: YSVIFSWSYDFLPLTLRLLHRSR*RCCRRG
Trigger: ACCTCTTCGACAACAGCGTCATCTTGAGCGGTGCAA...CAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAAAATTACAGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR CCA 90 bp GTAATTTTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATAGGTTTCTGATCCACTaGAACCGGTGCACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VIFSWSYDFLPLTLRLTDRFLIH*NRCTPS
Trigger: AGAAGGCGTGCACCGGTTCCAGTGGATCAGAAACCT...ATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAAAATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589426.5
CDS-3UTR CCA 90 bp CTTCATCAAGGCCATTCCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTACAGATTTAAACGGATaGAACCCGAGGGCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: LHQGHSCLSSEEVLDQWSTDLNG*NPRALA
Trigger: AGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGT...ACTCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGAATGGCCTTGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589425.5
ENST00000589426.5
3UTR CAA 72 bp CTCAGTCAACAGGGTCTCAGTGACAATCTCATCGATTaGAATCTCGAAGGGCTTCATCTGAATCAGCGGATA +
Preference number: 4 (lower is better)
Translates to: LSQQGLSDNLID*NLEGLHLNQRI
Trigger: TATCCGCTGATTCAGATGAAGCCCTTCGAGATTCAAATCGATGAGATTGTCACTGAGACCCTGTTGACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CCA 90 bp AATAGGGCGAGTAGAAATAATAGCAGTCTGGTTAAAGGCAATATTTATATGCACTGGCCTGAAGCCTTTTaGGGTAGAGCCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: NRASRNNSSLVKGNIYMHWPEAF*GRAQLC
Trigger: GCAGAGCTGGGCTCTACCCCAAAAGGCTTCAGGCCA...GTGCATATAAATATTGCCTTTAACCAGACTGCTATTATTTCTACTCGCCCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262764.11
CDS-3UTR CCA 90 bp AATAGGGCGAGTAGAAATAATAGCAGTCTGGTTAAAGGCAATATTTATATGCACTTGCTGTGGAAGGTCTaGGCATGCAGCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NRASRNNSSLVKGNIYMHLLWKV*ACSICW
Trigger: CCAGCAGATGCTGCATGCCCAGACCTTCCACAGCAA...GTGCATATAAATATTGCCTTTAACCAGACTGCTATTATTTCTACTCGCCCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262764.11
CDS-3UTR CCA 90 bp AAGGCCATTCCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTCACCATCTCTGTAATTTTTAGCTaGAGTTATGACTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KAIPVCPQKKFLISGVTISVIFS*SYDFLP
Trigger: TGGCAGGAAGTCATAACTCCAGCTAAAAATTACAGA...GATGGTGACTCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGAATGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp GTAATTTTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATACAATCTCATCGATTTaGATCTCGAAGGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: VIFSWSYDFLPLTLRLTDTISSI*ISKGFI
Trigger: GATGAAGCCCTTCGAGATTCAAATCGATGAGATTGT...ATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAAAATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp GTAATTTTTAGCTGGAGTTATGACTTCCTGCCACTGACATTAAGGCTGACAGATAGAGAATGGAGACCTTaGGATTTGAAGGAAACTTTG +
Preference number: 4 (lower is better)
Translates to: VIFSWSYDFLPLTLRLTDREWRP*DLKETL
Trigger: CAAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCT...ATCTGTCAGCCTTAATGTCAGTGGCAGGAAGTCATAACTCCAGCTAAAAATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp GTGTATGTACACATAGGGCAGACATTACACATTAAGAATCAGGGAACTTTACTCTCAACAGGGTCTCAGTaGCAATCTCATCGATTTGAA +
Preference number: 4 (lower is better)
Translates to: VYVHIGQTLHIKNQGTLLSTGSQ*QSHRFE
Trigger: TTCAAATCGATGAGATTGTCACTGAGACCCTGTTGA...GAGTAAAGTTCCCTGATTCTTAATGTGTAATGTCTGCCCTATGTGTACATACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR TCA 90 bp GCGAGTAGAAATAATAGCAGTCTGGTTAAAGGCAATATTTATATGCACAGATGTCTCAGAAGAAGTTCTTaGTCAGTGGAGTCACCATCT +
Preference number: 4 (lower is better)
Translates to: ASRNNSSLVKGNIYMHRCLRRSS*SVESPS
Trigger: AGATGGTGACTCCACTGATCAAGAACTTCTTCTGAG...ACATCTGTGCATATAAATATTGCCTTTAACCAGACTGCTATTATTTCTACTCGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262764.11
CDS GCA 90 bp GGAGGTGACCTGGGGAACAGCTCCTGCGCTGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGCGTCCCAGGAGCGCGGCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: GGDLGNSSCAGGPGS*RGGRTGVPGARPAL
Trigger: CAGGGCTGGCCGCGCTCCTGGGACGCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCCAGCGCAGGAGCTGTTCCCCAGGTCACCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587356.1
ENST00000588169.5
CDS GCA 90 bp GCGACAGAGTGGGACTCCATCTCCTGCGCTGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGCGTCCCAGGAGCGCGGCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: ATEWDSISCAGGPGS*RGGRTGVPGARPAL
Trigger: CAGGGCTGGCCGCGCTCCTGGGACGCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCCAGCGCAGGAGATGGAGTCCCACTCTGTCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS GCA 90 bp CCAATAACAGCCATGGTGACCTCCTGCGCTGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGCGTCCCAGGAGCGCGGCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: PITAMVTSCAGGPGS*RGGRTGVPGARPAL
Trigger: CAGGGCTGGCCGCGCTCCTGGGACGCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCCAGCGCAGGAGGTCACCATGGCTGTTATTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262764.11
ENST00000585521.2
ENST00000589426.5
ENST00000589689.5
ENST00000592043.5
CDS GCA 90 bp TTGGCTACTCTTATCTGCCCCTCCTGCGCTGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGCGTCCCAGGAGCGCGGCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LATLICPSCAGGPGS*RGGRTGVPGARPAL
Trigger: CAGGGCTGGCCGCGCTCCTGGGACGCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCCAGCGCAGGAGGGGCAGATAAGAGTAGCCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS GCA 90 bp CTGAGTGACAGAACAAGACTCTCCTGCGCTGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGCGTCCCAGGAGCGCGGCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LSDRTRLSCAGGPGS*RGGRTGVPGARPAL
Trigger: CAGGGCTGGCCGCGCTCCTGGGACGCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCCAGCGCAGGAGAGTCTTGTTCTGTCACTCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586325.5
CDS CCA 90 bp CAGCACAGGGATGTCAGCGAGGCGTCCAGGCAGCAGCCCACGGTCTaGCTCTACCGACGCCCCACCCTGTGCACTACAGCCGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QHRDVSEASRQQPTV*LYRRPTLCTTAGQG
Trigger: GCCCTGGCCGGCTGTAGTGCACAGGGTGGGGCGTCGGTAGAGCCAGACCGTGGGCTGCTGCCTGGACGCCTCGCTGACATCCCTGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS GCA 90 bp TCCAGGCAGCAGCCCACGGTCTGGCTCTACCGACGCCCCACCCTGTaGACTACAGCCGGCCAGGGCAGCAAGCCAGAGCCACTCTCACGA +
Preference number: 5 (lower is better)
Translates to: SRQQPTVWLYRRPTL*TTAGQGSKPEPLSR
Trigger: TCGTGAGAGTGGCTCTGGCTTGCTGCCCTGGCCGGCTGTAGTGCACAGGGTGGGGCGTCGGTAGAGCCAGACCGTGGGCTGCTGCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS TCA 90 bp CTGCCCGGACCTCTAGGCGTCAAGACAGTCCAGGGGTACCTCAGGTaGCTGTGGGACCCCACTGGTGCCTCTGGTGAAGCGGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: LPGPLGVKTVQGYLR*LWDPTGASGEAAGP
Trigger: GGGGCCTGCCGCTTCACCAGAGGCACCAGTGGGGTCCCACAGTCACCTGAGGTACCCCTGGACTGTCTTGACGCCTAGAGGTCCGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS CCA 90 bp GATCCACTGGAACCGGTGCACGCCTTCTGGACACAGGCAGCAAGGTaGGGAGGTGACCTGGGGAACAGCTCCTGCGCTGGCGGTCCCGGT +
Preference number: 5 (lower is better)
Translates to: DPLEPVHAFWTQAAR*GGDLGNSSCAGGPG
Trigger: ACCGGGACCGCCAGCGCAGGAGCTGTTCCCCAGGTCACCTCCCCACCTTGCTGCCTGTGTCCAGAAGGCGTGCACCGGTTCCAGTGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587356.1
ENST00000588169.5
CDS TCA 90 bp ACTACCCACAACATCCAGAACCAGAGAGCAGGGGCCTCGGGAGCCTaGCCCCACCCGGAGTGCAGTCCAGGCCCTGAGGGATCCAGGACA +
Preference number: 5 (lower is better)
Translates to: TTHNIQNQRAGASGA*PHPECSPGPEGSRT
Trigger: TGTCCTGGATCCCTCAGGGCCTGGACTGCACTCCGGGTGGGGTCAGGCTCCCGAGGCCCCTGCTCTCTGGTTCTGGATGTTGTGGGTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS TCA 90 bp CTTGCTCCTTTGGCGTGGAACGTCCAGCCCCTCCGCCAGTACTCCTaGAGCTGGACCCGCTCCTGCTGTCCCAGGCTGCACACCTCACTG +
Preference number: 5 (lower is better)
Translates to: LAPLAWNVQPLRQYS*SWTRSCCPRLHTSL
Trigger: CAGTGAGGTGTGCAGCCTGGGACAGCAGGAGCGGGTCCAGCTTCAGGAGTACTGGCGGAGGGGCTGGACGTTCCACGCCAAAGGAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586019.1
CDS-3UTR CAA 90 bp ACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACACCACACCTGACCTCAGGGGAGTGGGAGCAGCATaGTGCGGGAGTTCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: TWRLGCSKVAEDTTPDLRGVGAA*CGSSSG
Trigger: GCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCC...CCTGAGGTCAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp GGATGGCGCCGGCCACCCCCTTGGCCCCAAAGAAGCCATTCACCTCTGGTGAGGAGGCCGATGGTCTCGTaGAAGCGCTCAGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: GWRRPPPWPQRSHSPLVRRPMVS*KRSGMR
Trigger: CCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCT...CCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CAA 90 bp CCACCCTTCCTGCCAGCCCCTCCCTCACTTACTGGCAGCACACCTGACCCTCAGTACAGCCAGAGGCCTTaGGCGTGGAACGTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PPFLPAPPSLTGSTPDPQYSQRP*AWNVQP
Trigger: GGGCTGGACGTTCCACGCCAAAGGCCTCTGGCTGTA...CTGAGGGTCAGGTGTGCTGCCAGTAAGTGAGGGAGGGGCTGGCAGGAAGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589425.5
CDS TCA 90 bp AGAGCACTAAGGTGCCAGGCACTAAGGGAGCCCACGCTGCACACATaGGATGCCGGCACTAGCGCATGTGCCGGCCACATGGGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: RALRCQALREPTLHT*DAGTSACAGHMGPG
Trigger: GCCAGGACCCATGTGGCCGGCACATGCGCTAGTGCCGGCATCTCATGTGTGCAGCGTGGGCTCCCTTAGTGCCTGGCACCTTAGTGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS TCA 90 bp CACGGAGCAGTCAGCCCAGGGCAGAAGTGCGTTTTGTGGCTGCACTaGGACTCCAGGTCATGCTGGCTGGCCCAGTCTCACCCACTCCCC +
Preference number: 5 (lower is better)
Translates to: HGAVSPGQKCVLWLH*DSRSCWLAQSHPLP
Trigger: GGGGAGTGGGTGAGACTGGGCCAGCCAGCATGACCTGGAGTCTCAGTGCAGCCACAAAACGCACTTCTGCCCTGGGCTGACTGCTCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586880.1
CDS GCA 90 bp CCTGCCACGGAGCAGTCAGCCCAGGGCAGAAGTGCGTTTTGTGGCTaGACTGAGACTCCAGGTCATGCTGGCTGGCCCAGTCTCACCCAC +
Preference number: 5 (lower is better)
Translates to: PATEQSAQGRSAFCG*TETPGHAGWPSLTH
Trigger: GTGGGTGAGACTGGGCCAGCCAGCATGACCTGGAGTCTCAGTGCAGCCACAAAACGCACTTCTGCCCTGGGCTGACTGCTCCGTGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586880.1
CDS-3UTR CAA 90 bp CCCCACCGCGTCCACCAGCTCCGTGAAGAAGTCGGCAATCTCCGCACAGTCCTGAGGCCGATGGTCTCGTaGAAGCGCTCAGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: PHRVHQLREEVGNLRTVLRPMVS*KRSGMR
Trigger: CCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCT...CAGGACTGTGCGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACGCGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR CAA 90 bp CTCACTGAAGAACTGTCGCTCGATGTGCACATAGGCCGCTGGGATGGCGCCGGCTACAGCCAGAGGCCTTaGGCGTGGAACGTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: LTEELSLDVHIGRWDGAGYSQRP*AWNVQP
Trigger: GGGCTGGACGTTCCACGCCAAAGGCCTCTGGCTGTA...GCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGACAGTTCTTCAGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS GCA 90 bp CTCGGACCTGCTCTGGGAACCTCCGCAGGAGTGGGAGCAGCATTGTaGGGGAGTTCTTCCGGCCTGAACACGGACAGAGAAAACGGCACC +
Preference number: 5 (lower is better)
Translates to: LGPALGTSAGVGAAL*GSSSGLNTDRENGT
Trigger: GGTGCCGTTTTCTCTGTCCGTGTTCAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588281.5
CDS CCA 90 bp CGGTGCACGCCTTCTGGACACAGGCAGCAAGGTGGGGAGGTGACCTaGGGAACAGCTGGGGACAGCAAGGGAGCCAATAACAGCCATGGT +
Preference number: 5 (lower is better)
Translates to: RCTPSGHRQQGGEVT*GTAGDSKGANNSHG
Trigger: ACCATGGCTGTTATTGGCTCCCTTGCTGTCCCCAGCTGTTCCCCAGGTCACCTCCCCACCTTGCTGCCTGTGTCCAGAAGGCGTGCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262764.11
ENST00000585521.2
ENST00000586510.6
ENST00000589426.5
ENST00000589689.5
ENST00000592043.5
CDS CCA 90 bp CTGTGGGACCCCACTGGTGCCTCTGGTGAAGCGGCAGGCCCCTCCTaGGTGGGCAGAGCAGGTCCTGTTACTCAACTTCCAGAGTCTAGA +
Preference number: 5 (lower is better)
Translates to: LWDPTGASGEAAGPS*VGRAGPVTQLPESR
Trigger: TCTAGACTCTGGAAGTTGAGTAACAGGACCTGCTCTGCCCACCCAGGAGGGGCCTGCCGCTTCACCAGAGGCACCAGTGGGGTCCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586880.1
ENST00000591996.1
CDS CCA 90 bp CGCTGCTCTCTGTTGCTCCGGCTGCTTTGCAGAGTTAGGGAGGCTTaGTGTGGGGAGCTCCTCAGGGAGAACCTGCCTAGGACAGCCTCG +
Preference number: 5 (lower is better)
Translates to: RCSLLLRLLCRVREA*CGELLRENLPRTAS
Trigger: CGAGGCTGTCCTAGGCAGGTTCTCCCTGAGGAGCTCCCCACACCAAGCCTCCCTAACTCTGCAAAGCAGCCGGAGCAACAGAGAGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS-3UTR CAA 90 bp GCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCGCTGATCACGACCCGCCTCTaGGCTACTCTTATCTGCCCC +
Preference number: 5 (lower is better)
Translates to: AILSLQGLAGTPRLESSLITTRL*ATLICP
Trigger: GGGGCAGATAAGAGTAGCCAAGAGGCGGGTCGTGAT...CAGCGATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262764.11
ENST00000589425.5
CDS-3UTR CAA 90 bp CCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACACCACACCATCACGACCCGCCTCTaGGCTACTCTTATCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PQLHLATRLLEGGRGHHTITTRL*ATLICP
Trigger: GGGGCAGATAAGAGTAGCCAAGAGGCGGGTCGTGAT...GGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR CAA 90 bp CAGCAGGATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCATGTAGGCCTGGGAGTGGGAGCAGCATaGTGCGGGAGTTCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: QQDLVLSPSAQDQVHVGLGVGAA*CGSSSG
Trigger: GCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCC...CAGGCCTACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CAA 90 bp TGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCTGAAAGGCCGATGGTCTCGTaGAAGCGCTCAGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: CRPSPTKASASSRGSWPERPMVS*KRSGMR
Trigger: CCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCT...TTCAGGCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS GCA 90 bp CACTGTGGCCAGGCCGCCGCTCCACCTATCCCCAGCCACTCAAACTaGAGGTCTGCCTGGTGCGGAAGCTGCAACTGTCCTTGTCTAAGA +
Preference number: 5 (lower is better)
Translates to: HCGQAAAPPIPSHSN*RSAWCGSCNCPCLR
Trigger: TCTTAGACAAGGACAGTTGCAGCTTCCGCACCAGGCAGACCTGCAGTTTGAGTGGCTGGGGATAGGTGGAGCGGCGGCCTGGCCACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS CCA 90 bp GCCGCCGCTCCACCTATCCCCAGCCACTCAAACTGCAGGTCTGCCTaGTGCGGAAGCTGCAACTGTCCTTGTCTAAGACCAGGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: AAAPPIPSHSNCRSA*CGSCNCPCLRPGEP
Trigger: AGGCTCACCTGGTCTTAGACAAGGACAGTTGCAGCTTCCGCACCAGGCAGACCTGCAGTTTGAGTGGCTGGGGATAGGTGGAGCGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS-3UTR CAA 90 bp TTCCTGCCAGCCCCTCCCTCACTTACTGGCAGCACACCTGACCCTCAGCCATACCTCTTATTGGCTGCCTaGCAGTACTCGGCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: FLPAPPSLTGSTPDPQPYLLLAA*QYSARS
Trigger: GGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAG...GTATGGCTGAGGGTCAGGTGTGCTGCCAGTAAGTGAGGGAGGGGCTGGCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp CCAGCAGGATCTGGTACTCAGCCCGAGTGCCCAAGACCAGGTCCATGTAGGCCTCTCTTATTGGCTGCCTaGCAGTACTCGGCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: PAGSGTQPECPRPGPCRPLLLAA*QYSARS
Trigger: GGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAG...AGGCCTACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CAA 90 bp GTCCACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACTACAGCCAGAGGCCTTaGGCGTGGAACGTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: VHQLLFQRTCPQVEGCHHYSQRP*AWNVQP
Trigger: GGGCTGGACGTTCCACGCCAAAGGCCTCTGGCTGTA...GTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS TCA 90 bp CCTCCGCAGGAGTGGGAGCAGCATTGTGCGGGAGTTCTTCCGGCCTaGACACGGACAGAGAAAACGGCACCTGACTCACAACAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PPQEWEQHCAGVLPA*TRTEKTAPDSQQEG
Trigger: GCCTTCCTGTTGTGAGTCAGGTGCCGTTTTCTCTGTCCGTGTTCAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCCTGCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588281.5
CDS TCA 90 bp ACAGCAGAGCTTGTGAGAGAGCAGCTCCGACGTGATGAAAAGCGCTaGAAAGCCCAGGCTTTCCCTGCCACGGAGCAGTCAGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: TAELVREQLRRDEKR*KAQAFPATEQSAQG
Trigger: GCCCTGGGCTGACTGCTCCGTGGCAGGGAAAGCCTGGGCTTTTCAGCGCTTTTCATCACGTCGGAGCTGCTCTCTCACAAGCTCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586880.1
CDS GCA 90 bp GTCCACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATaGCATCACGACCCGCCTCTTGGCTACTCTTATCTGCCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: VHQLLFQRTCPQVEG*HHDPPLGYSYLPLL
Trigger: CAGGAGGGGCAGATAAGAGTAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS GCA 90 bp GCAGAGTTAGGGAGGCTTGGTGTGGGGAGCTCCTCAGGGAGAACCTaGCTAGGACAGCCTCGAAGGTCATCAGCAGAGACAGAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: AELGRLGVGSSSGRT*LGQPRRSSAETEGA
Trigger: TGCTCCCTCTGTCTCTGCTGATGACCTTCGAGGCTGTCCTAGGCAGGTTCTCCCTGAGGAGCTCCCCACACCAAGCCTCCCTAACTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS CCA 90 bp TTCTGGAACCAGGTTTCTGATCCACTGGAACCGGTGCACGCCTTCTaGACACAGGCAGCAAGGTGGGGAGGTGACCTGGGGAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: FWNQVSDPLEPVHAF*TQAARWGGDLGNSW
Trigger: CCAGCTGTTCCCCAGGTCACCTCCCCACCTTGCTGCCTGTGTCCAGAAGGCGTGCACCGGTTCCAGTGGATCAGAAACCTGGTTCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262764.11
ENST00000585521.2
ENST00000586510.6
ENST00000589426.5
ENST00000589689.5
ENST00000592043.5
CDS CCA 90 bp TTCTGGAACCAGGTTTCTGATCCACTGGAACCGGTGCACGCCTTCTaGACACAGGCAGCAAGGTGGGGAGGTGACCTGGGGAACAGCTCC +
Preference number: 5 (lower is better)
Translates to: FWNQVSDPLEPVHAF*TQAARWGGDLGNSS
Trigger: GGAGCTGTTCCCCAGGTCACCTCCCCACCTTGCTGCCTGTGTCCAGAAGGCGTGCACCGGTTCCAGTGGATCAGAAACCTGGTTCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587356.1
ENST00000588169.5
CDS-3UTR CAA 90 bp GTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCGGAGTGGGAGCAGCATaGTGCGGGAGTTCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: VVTTCRPSPTKASASSRGGVGAA*CGSSSG
Trigger: GCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCC...GCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS GCA 90 bp CTCTCACGAGCAAACGTGCTCCCCTCCTCCCACGTCTACATCTCCTaGACCAGTGTGCTCAGCTTGGAGGGGCTCAATCTGCCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LSRANVLPSSHVYIS*TSVLSLEGLNLPFC
Trigger: GCAGAAAGGCAGATTGAGCCCCTCCAAGCTGAGCACACTGGTGCAGGAGATGTAGACGTGGGAGGAGGGGAGCACGTTTGCTCGTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS GCA 90 bp GCCGCTCCACCTATCCCCAGCCACTCAAACTGCAGGTCTGCCTGGTaGGGAAGCTGCAACTGTCCTTGTCTAAGACCAGGTGAGCCTATG +
Preference number: 5 (lower is better)
Translates to: AAPPIPSHSNCRSAW*GSCNCPCLRPGEPM
Trigger: CATAGGCTCACCTGGTCTTAGACAAGGACAGTTGCAGCTTCCGCACCAGGCAGACCTGCAGTTTGAGTGGCTGGGGATAGGTGGAGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS GCA 90 bp ACAGCCTCGAAGGTCATCAGCAGAGACAGAGGGAGCAGTGTGCGCTaGGGGAACGGCACTGCAGATAGATTGCTTAAGCCTGGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: TASKVISRDRGSSVR*GNGTADRLLKPGCG
Trigger: GCCACAGCCAGGCTTAAGCAATCTATCTGCAGTGCCGTTCCCGCAGCGCACACTGCTCCCTCTGTCTCTGCTGATGACCTTCGAGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS-3UTR CAA 90 bp CCAGGTAGAGGGATGCCATCACGACCCGCCTCTTGGCTACTCTTATCTGCCCCTATCACGACCCGCCTCTaGGCTACTCTTATCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PGRGMPSRPASWLLLSAPITTRL*ATLICP
Trigger: GGGGCAGATAAGAGTAGCCAAGAGGCGGGTCGTGAT...AGGGGCAGATAAGAGTAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS-3UTR CAA 90 bp GTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGGCCGATGGTCTCGTaGAAGCGCTCAGGGATGAGG +
Preference number: 5 (lower is better)
Translates to: VVTTCRPSPTKASASSRGRPMVS*KRSGMR
Trigger: CCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCT...GCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp CTCAGCCATACTGTCCCTGCAGGGGCTCGCTGGGACACCCAGACTGGAGTCATCTCCATGACCCTCTTATaGGCTGCCTTGCAGTACTCG +
Preference number: 5 (lower is better)
Translates to: LSHTVPAGARWDTQTGVISMTLL*AALQYS
Trigger: CGAGTACTGCAAGGCAGCCAATAAGAGGGTCATGGA...GATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp GGCCCGGTCCCCTTTGTAAGGATGCACCATCCCATCCACCACCTGCACCGTGTCTCCATGACCCTCTTATaGGCTGCCTTGCAGTACTCG +
Preference number: 5 (lower is better)
Translates to: GPVPFVRMHHPIHHLHRVSMTLL*AALQYS
Trigger: CGAGTACTGCAAGGCAGCCAATAAGAGGGTCATGGA...GACACGGTGCAGGTGGTGGATGGGATGGTGCATCCTTACAAAGGGGACCGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS GCA 90 bp GAGACTCCAAATTCTGGAACCAGGTTTCTGATCCACTGGAACCGGTaGACGCCTTCTGGACACAGGCAGCAAGGTGGGGAGGTGACCTGG +
Preference number: 5 (lower is better)
Translates to: ETPNSGTRFLIHWNR*TPSGHRQQGGEVTW
Trigger: CCAGGTCACCTCCCCACCTTGCTGCCTGTGTCCAGAAGGCGTGCACCGGTTCCAGTGGATCAGAAACCTGGTTCCAGAATTTGGAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262764.11
ENST00000585521.2
ENST00000586325.5
ENST00000586510.6
ENST00000587356.1
ENST00000588169.5
ENST00000589426.5
ENST00000589689.5
ENST00000592043.5
CDS GCA 90 bp GTCCACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATaGCATCACGACCCGCCTCTTGGCTACTCTTATCTGCCCCTTCAT +
Preference number: 5 (lower is better)
Translates to: VHQLLFQRTCPQVEG*HHDPPLGYSYLPLH
Trigger: ATGAAGGGGCAGATAAGAGTAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262764.11
ENST00000585521.2
ENST00000586510.6
ENST00000587356.1
ENST00000592043.5
CDS GCA 90 bp AGCCTATGCAACCTTTCAGACCCCATGAAGGGTGACAGTGACTCCTaGCAGCCCTCGGGAGGGAAAGGCGAGAAGCTGCTTCTAGAGAGG +
Preference number: 5 (lower is better)
Translates to: SLCNLSDPMKGDSDS*QPSGGKGEKLLLER
Trigger: CCTCTCTAGAAGCAGCTTCTCGCCTTTCCCTCCCGAGGGCTGGCAGGAGTCACTGTCACCCTTCATGGGGTCTGAAAGGTTGCATAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS-3UTR CAA 90 bp CTCAGGGATGAGGAGCCGAAGCAGCCCACGGAGGTGCGGCGTGTGAAAGAGGGACTCAAGATGACGCTGTaGTCGAAGAGGTACACCTTA +
Preference number: 5 (lower is better)
Translates to: LRDEEPKQPTEVRRVKEGLKMTL*SKRYTL
Trigger: TAAGGTGTACCTCTTCGACAACAGCGTCATCTTGAG...TCCCTCTTTCACACGCCGCACCTCCGTGGGCTGCTTCGGCTCCTCATCCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CAA 90 bp CAAAGAGCCCTCTGGAAGCTCTGGTTGAGTCAGAACAACCACCTGCCCCACCTGCAGGTAGAGCTGCTCTaGCTCCTTTGGCGTGGAACG +
Preference number: 5 (lower is better)
Translates to: QRALWKLWLSQNNHLPHLQVELL*LLWRGT
Trigger: CGTTCCACGCCAAAGGAGCAAGAGCAGCTCTACCTG...CAGGTGGGGCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGCTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586019.1
CDS CCA 90 bp TTCTGGAACCAGGTTTCTGATCCACTGGAACCGGTGCACGCCTTCTaGACACAGGCAGCAAGGTGGGGAGGTGACCTGGGGAACAGAAAA +
Preference number: 5 (lower is better)
Translates to: FWNQVSDPLEPVHAF*TQAARWGGDLGNRK
Trigger: TTTTCTGTTCCCCAGGTCACCTCCCCACCTTGCTGCCTGTGTCCAGAAGGCGTGCACCGGTTCCAGTGGATCAGAAACCTGGTTCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586325.5
CDS-3UTR CAA 90 bp GTCCTGCAGGAACACGTAGCGGTCCTGGCGGTTGGTGAAGTAGGAGTCACTCAGTCCATGACCCTCTTATaGGCTGCCTTGCAGTACTCG +
Preference number: 5 (lower is better)
Translates to: VLQEHVAVLAVGEVGVTQSMTLL*AALQYS
Trigger: CGAGTACTGCAAGGCAGCCAATAAGAGGGTCATGGA...CTGAGTGACTCCTACTTCACCAACCGCCAGGACCGCTACGTGTTCCTGCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR CAA 90 bp CAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCCTCAGAAGAAGTTCTaGATCAGTGGAGTCACCATC +
Preference number: 5 (lower is better)
Translates to: QHAGHHLRRPLLPAVAAGPQKKF*ISGVTI
Trigger: GATGGTGACTCCACTGATCAAGAACTTCTTCTGAGG...GCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS TCA 90 bp CCACAGGACACCGTAATAACTAGTTGGAAGGCAAACAGTGTTAACTaGTGTGATGTGCTGCTGTCCAGGGCACTGTGGCCAGGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PQDTVITSWKANSVN*CDVLLSRALWPGRR
Trigger: GCGGCGGCCTGGCCACAGTGCCCTGGACAGCAGCACATCACATCAGTTAACACTGTTTGCCTTCCAACTAGTTATTACGGTGTCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS GCA 90 bp GCAGGGACTAAATCTAATCTCACTCCCCGAAAGGACAGGCTGCCATaGCCTGTAGCCCAGGAAGCTTCTCTCTGTGCAAGGGTCAAGCAC +
Preference number: 5 (lower is better)
Translates to: AGTKSNLTPRKDRLP*PVAQEASLCARVKH
Trigger: GTGCTTGACCCTTGCACAGAGAGAAGCTTCCTGGGCTACAGGGCATGGCAGCCTGTCCTTTCGGGGAGTGAGATTAGATTTAGTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS GCA 90 bp CCTATCCCCAGCCACTCAAACTGCAGGTCTGCCTGGTGCGGAAGCTaGAACTGTCCTTGTCTAAGACCAGGTGAGCCTATGCAACCTTTC +
Preference number: 5 (lower is better)
Translates to: PIPSHSNCRSAWCGS*NCPCLRPGEPMQPF
Trigger: GAAAGGTTGCATAGGCTCACCTGGTCTTAGACAAGGACAGTTGCAGCTTCCGCACCAGGCAGACCTGCAGTTTGAGTGGCTGGGGATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS-3UTR CAA 90 bp TTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTTCCATGACCCTCTTATaGGCTGCCTTGCAGTACTCG +
Preference number: 5 (lower is better)
Translates to: LQHAGHHLRRPLLPAVAASMTLL*AALQYS
Trigger: CGAGTACTGCAAGGCAGCCAATAAGAGGGTCATGGA...AGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp CCAGGTACAGCCAGAGGCCTTTGGCGTGGAACGTCCAGCCCCTCCGCCAGTACTGACAATCTCATCGATTaGAATCTCGAAGGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: PGTARGLWRGTSSPSASTDNLID*NLEGLH
Trigger: ATGAAGCCCTTCGAGATTCAAATCGATGAGATTGTC...AGTACTGGCGGAGGGGCTGGACGTTCCACGCCAAAGGCCTCTGGCTGTACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CAA 90 bp ATCCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTCCCAGCACAGGCGCCTaGGGACTTAGTGGAGTGGGT +
Preference number: 5 (lower is better)
Translates to: IQLLTLRTAAIPLKMLLCPSTGA*GLSGVG
Trigger: ACCCACTCCACTAAGTCCCAAGGCGCCTGTGCTGGG...ACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586355.1
CDS CCA 90 bp CGGGGAAGAAAGCACCCTAACGTGAGAACTGGAGACTCCAAATTCTaGAACCAGGTTTCTGATCCACTGGAACCGGTGCACGCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RGRKHPNVRTGDSKF*NQVSDPLEPVHAFW
Trigger: CCAGAAGGCGTGCACCGGTTCCAGTGGATCAGAAACCTGGTTCCAGAATTTGGAGTCTCCAGTTCTCACGTTAGGGTGCTTTCTTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262764.11
ENST00000585521.2
ENST00000586325.5
ENST00000586510.6
ENST00000587356.1
ENST00000588169.5
ENST00000589426.5
ENST00000589689.5
ENST00000592043.5
CDS-3UTR CAA 90 bp ATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTCATCCTCAAGATGACGCTGTaGTCGAAGAGGTACACCTTA +
Preference number: 5 (lower is better)
Translates to: IAEARLKELTPAMPVIFILKMTL*SKRYTL
Trigger: TAAGGTGTACCTCTTCGACAACAGCGTCATCTTGAG...GATGAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262764.11
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp CTTAATGTGCTGGAGGCCGATGGTCTCGTTGAAGCGCTCAGGGATGAGGAGCCGCTCAAGATGACGCTGTaGTCGAAGAGGTACACCTTA +
Preference number: 5 (lower is better)
Translates to: LNVLEADGLVEALRDEEPLKMTL*SKRYTL
Trigger: TAAGGTGTACCTCTTCGACAACAGCGTCATCTTGAG...CGGCTCCTCATCCCTGAGCGCTTCAACGAGACCATCGGCCTCCAGCACATTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588169.5
ENST00000589425.5
CDS-3UTR CAA 90 bp AGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACACCACACCTGACGACAATCTCATCGATTaGAATCTCGAAGGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: SFTWRLGCSKVAEDTTPDDNLID*NLEGLH
Trigger: ATGAAGCCCTTCGAGATTCAAATCGATGAGATTGTC...GTCAGGTGTGGTGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp CACCAGCTCCTGTTCCAAAGGACCTGTCCCCAGGTAGAGGGATGCCATCACGACCCTCAGAAGAAGTTCTaGATCAGTGGAGTCACCATC +
Preference number: 5 (lower is better)
Translates to: HQLLFQRTCPQVEGCHHDPQKKF*ISGVTI
Trigger: GATGGTGACTCCACTGATCAAGAACTTCTTCTGAGG...GTCGTGATGGCATCCCTCTACCTGGGGACAGGTCCTTTGGAACAGGAGCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS-3UTR CAA 90 bp ATCGCTGAAGCGCGGCTGAAAGAGCTGACCCCGGCCATGCCTGTCATCTTCATCCCTCAGAAGAAGTTCTaGATCAGTGGAGTCACCATC +
Preference number: 5 (lower is better)
Translates to: IAEARLKELTPAMPVIFIPQKKF*ISGVTI
Trigger: GATGGTGACTCCACTGATCAAGAACTTCTTCTGAGG...GATGAAGATGACAGGCATGGCCGGGGTCAGCTCTTTCAGCCGCGCTTCAGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262764.11
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS GCA 90 bp CTCTGTTTACCGAGAGCCTCTCTCCAAACAGAAACCCAGTGCCCCTaGACATTCCTTTGGCTCCTCCAGTCTAATTGTCCCACAGGACAC +
Preference number: 5 (lower is better)
Translates to: LCLPRASLQTETQCP*TFLWLLQSNCPTGH
Trigger: GTGTCCTGTGGGACAATTAGACTGGAGGAGCCAAAGGAATGTGCAGGGGCACTGGGTTTCTGTTTGGAGAGAGGCTCTCGGTAAACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS-3UTR CAA 90 bp GCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGCCTGAAGGATTTGAAGGAAACTTaGCTTGGAGTGACTTTTCTA +
Preference number: 5 (lower is better)
Translates to: AGHHLRRPLLPAVAAGLKDLKET*LGVTFL
Trigger: TAGAAAAGTCACTCCAAGCAAAGTTTCCTTCAAATC...CTTCAGGCCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp CCCCACCGCGTCCACCAGCTCCGTGAAGAAGTCGGCAATCTCCGCACAGTCCTGAAGAGAATGGAGACCTaGAGATTTGAAGGAAACTTT +
Preference number: 5 (lower is better)
Translates to: PHRVHQLREEVGNLRTVLKRMET*RFEGNF
Trigger: AAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCTT...CAGGACTGTGCGGAGATTGCCGACTTCTTCACGGAGCTGGTGGACGCGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS-3UTR CAA 90 bp ACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCAGCTGGGACAATCTCATCGATTaGAATCTCGAAGGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: TTCRPSPTKASASSRGSWDNLID*NLEGLH
Trigger: ATGAAGCCCTTCGAGATTCAAATCGATGAGATTGTC...CCAGCTGCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp CAAAGAGCCCTCTGGAAGCTCTGGTTGAGTCAGAACAACCACCTGCCCCACCTGCCTCAGAAGAAGTTCTaGATCAGTGGAGTCACCATC +
Preference number: 5 (lower is better)
Translates to: QRALWKLWLSQNNHLPHLPQKKF*ISGVTI
Trigger: GATGGTGACTCCACTGATCAAGAACTTCTTCTGAGG...CAGGTGGGGCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGCTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR CAA 90 bp GATCAAAGAGCCCTCTGGAAGCTCTGGTTGAGTCAGAACAACCACCTGCCCCACATCCAGCTTCTAACTTaGAGGACAGCTGCCATACCC +
Preference number: 5 (lower is better)
Translates to: DQRALWKLWLSQNNHLPHIQLLT*RTAAIP
Trigger: GGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGGAT...GTGGGGCAGGTGGTTGTTCTGACTCAACCAGAGCTTCCAGAGGGCTCTTTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS GCA 90 bp TGCGAACTCTGTTTACCGAGAGCCTCTCTCCAAACAGAAACCCAGTaGCCCTGCACATTCCTTTGGCTCCTCCAGTCTAATTGTCCCACA +
Preference number: 5 (lower is better)
Translates to: CELCLPRASLQTETQ*PCTFLWLLQSNCPT
Trigger: TGTGGGACAATTAGACTGGAGGAGCCAAAGGAATGTGCAGGGGCACTGGGTTTCTGTTTGGAGAGAGGCTCTCGGTAAACAGAGTTCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS-3UTR CAA 90 bp CTTCATCAAGGCCATTCCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGAGTCTCTTATTGGCTGCCTaGCAGTACTCGGCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: LHQGHSCLSSEEVLDQWSLLLAA*QYSARS
Trigger: GGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAG...ACTCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGAATGGCCTTGATGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589425.5
ENST00000589426.5
CDS TCA 90 bp CTGTGCAAGGGTCAAGCACCTGAAGATGATAAAGAGATCAGGCAGTaGGGTCACAAAAGCAGCTCCTGGAGACACTGGGGGATATGGAGA +
Preference number: 5 (lower is better)
Translates to: LCKGQAPEDDKEIRQ*GHKSSSWRHWGIWR
Trigger: TCTCCATATCCCCCAGTGTCTCCAGGAGCTGCTTTTGTGACCTCACTGCCTGATCTCTTTATCATCTTCAGGTGCTTGACCCTTGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS-3UTR CAA 90 bp TCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACAGATTTGAAGGAAACTTaGCTTGGAGTGACTTTTCTA +
Preference number: 5 (lower is better)
Translates to: SSPTASPGDSAARRWQRTDLKET*LGVTFL
Trigger: TAGAAAAGTCACTCCAAGCAAAGTTTCCTTCAAATC...TGTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp GCCCAGCGGGACGGGGTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTAAGAGAATGGAGACCTaGAGATTTGAAGGAAACTTT +
Preference number: 5 (lower is better)
Translates to: AQRDGVVTTCRPSPTKASKRMET*RFEGNF
Trigger: AAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCTT...AGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTACCCCGTCCCGCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp ATCTTCACCCACAGCTTCACCTGGCGACTCGGCTGCTCGAAGGTGGCAGAGGACAAGAGAATGGAGACCTaGAGATTTGAAGGAAACTTT +
Preference number: 5 (lower is better)
Translates to: IFTHSFTWRLGCSKVAEDKRMET*RFEGNF
Trigger: AAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCTT...GTCCTCTGCCACCTTCGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp ATCTTCATCAAGGCCATTCCTGTCTGTCCTCAGAAGAAGTTCTTGATCAGTGGACTCTTATTGGCTGCCTaGCAGTACTCGGCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: IFIKAIPVCPQKKFLISGLLLAA*QYSARS
Trigger: GGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAG...TCCACTGATCAAGAACTTCTTCTGAGGACAGACAGGAATGGCCTTGATGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp GTAGTTACAACATGCAGGCCATCACCTACGAAGGCCTCTGCTTCCAGCCGTGGCGACAATCTCATCGATTaGAATCTCGAAGGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: VVTTCRPSPTKASASSRGDNLID*NLEGLH
Trigger: ATGAAGCCCTTCGAGATTCAAATCGATGAGATTGTC...GCCACGGCTGGAAGCAGAGGCCTTCGTAGGTGATGGCCTGCATGTTGTAACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS-3UTR CAA 90 bp GGAGTCACTCAGGTTTGCACCGCTCAAGATGACGCTGTTGTCGAAGAGGTACACCCTCAGAAGAAGTTCTaGATCAGTGGAGTCACCATC +
Preference number: 5 (lower is better)
Translates to: GVTQVCTAQDDAVVEEVHPQKKF*ISGVTI
Trigger: GATGGTGACTCCACTGATCAAGAACTTCTTCTGAGG...GTGTACCTCTTCGACAACAGCGTCATCTTGAGCGGTGCAAACCTGAGTGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588169.5
CDS CCA 90 bp GAAACAAGCCAAGAGTGGCTGCCTGGGGGAAGGGAGGGCAGGAAATaGCCGCAGTATTGTTTTACTCTCTACATTTGCACACACTATTCA +
Preference number: 5 (lower is better)
Translates to: ETSQEWLPGGREGRK*PQYCFTLYICTHYS
Trigger: TGAATAGTGTGTGCAAATGTAGAGAGTAAAACAATACTGCGGCCATTTCCTGCCCTCCCTTCCCCCAGGCAGCCACTCTTGGCTTGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS-3UTR CAA 90 bp CCAGCTTCTAACTTTGAGGACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTCCTCAGAAGAAGTTCTaGATCAGTGGAGTCACCATC +
Preference number: 5 (lower is better)
Translates to: PASNFEDSCHTPEDAALCPQKKF*ISGVTI
Trigger: GATGGTGACTCCACTGATCAAGAACTTCTTCTGAGG...ACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR CAA 90 bp GACAGCTGCCATACCCCTGAAGATGCTGCTCTGTGTTTAACTGAGAAAGGGATCATCCAGCTTCTAACTTaGAGGACAGCTGCCATACCC +
Preference number: 5 (lower is better)
Translates to: DSCHTPEDAALCLTEKGIIQLLT*RTAAIP
Trigger: GGGTATGGCAGCTGTCCTCAAAGTTAGAAGCTGGAT...GATCCCTTTCTCAGTTAAACACAGAGCAGCATCTTCAGGGGTATGGCAGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586019.1
ENST00000586355.1
CDS-3UTR CAA 90 bp GTGTATGTACACATAGGGCAGACATTACACATTAAGAATCAGGGAACTTTACTCGGAGTGGGAGCAGCATaGTGCGGGAGTTCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: VYVHIGQTLHIKNQGTLLGVGAA*CGSSSG
Trigger: GCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCC...GAGTAAAGTTCCCTGATTCTTAATGTGTAATGTCTGCCCTATGTGTACATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS GCA 90 bp TGTGGCATAATGATATTTACTCTGGTCCCACAGAATCTGGAGGAATaGGAACTCTGTTTACCGAGAGCCTCTCTCCAAACAGAAACCCAG +
Preference number: 5 (lower is better)
Translates to: CGIMIFTLVPQNLEE*ELCLPRASLQTETQ
Trigger: CTGGGTTTCTGTTTGGAGAGAGGCTCTCGGTAAACAGAGTTCGCATTCCTCCAGATTCTGTGGGACCAGAGTAAATATCATTATGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS-3UTR CAA 90 bp TCTGAAAATGCCACAGATTTAAACGGATGGAACCCGAGGGCTTTAGCTGAGCTGAAGAGAATGGAGACCTaGAGATTTGAAGGAAACTTT +
Preference number: 5 (lower is better)
Translates to: SENATDLNGWNPRALAELKRMET*RFEGNF
Trigger: AAAGTTTCCTTCAAATCTCAAGGTCTCCATTCTCTT...CAGCTCAGCTAAAGCCCTCGGGTTCCATCCGTTTAAATCTGTGGCATTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262764.11
ENST00000589425.5
ENST00000589426.5
CDS GCA 72 bp GCCATGGTGACCTCCTGCGCTGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGCGTCCCAGGAGCGCGG +
Preference number: 6 (lower is better)
Translates to: AMVTSCAGGPGS*RGGRTGVPGAR
Trigger: CCGCGCTCCTGGGACGCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCCAGCGCAGGAGGTCACCATGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262764.11
ENST00000585521.2
ENST00000589426.5
ENST00000589689.5
ENST00000592043.5
CDS GCA 72 bp CTGGGGAACAGCTCCTGCGCTGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGCGTCCCAGGAGCGCGG +
Preference number: 6 (lower is better)
Translates to: LGNSSCAGGPGS*RGGRTGVPGAR
Trigger: CCGCGCTCCTGGGACGCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCCAGCGCAGGAGCTGTTCCCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587356.1
ENST00000588169.5
CDS GCA 72 bp CTTATCTGCCCCTCCTGCGCTGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGCGTCCCAGGAGCGCGG +
Preference number: 6 (lower is better)
Translates to: LICPSCAGGPGS*RGGRTGVPGAR
Trigger: CCGCGCTCCTGGGACGCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCCAGCGCAGGAGGGGCAGATAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS GCA 72 bp TGGGACTCCATCTCCTGCGCTGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGCGTCCCAGGAGCGCGG +
Preference number: 6 (lower is better)
Translates to: WDSISCAGGPGS*RGGRTGVPGAR
Trigger: CCGCGCTCCTGGGACGCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCCAGCGCAGGAGATGGAGTCCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586510.6
CDS GCA 72 bp AGAACAAGACTCTCCTGCGCTGGCGGTCCCGGTTCCTaGCGAGGCGGTCGGACAGGCGTCCCAGGAGCGCGG +
Preference number: 6 (lower is better)
Translates to: RTRLSCAGGPGS*RGGRTGVPGAR
Trigger: CCGCGCTCCTGGGACGCCTGTCCGACCGCCTCGGCAGGAACCGGGACCGCCAGCGCAGGAGAGTCTTGTTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586325.5
CDS GCA 72 bp CAGCCCACGGTCTGGCTCTACCGACGCCCCACCCTGTaGACTACAGCCGGCCAGGGCAGCAAGCCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: QPTVWLYRRPTL*TTAGQGSKPEP
Trigger: TGGCTCTGGCTTGCTGCCCTGGCCGGCTGTAGTGCACAGGGTGGGGCGTCGGTAGAGCCAGACCGTGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS CCA 72 bp GATGTCAGCGAGGCGTCCAGGCAGCAGCCCACGGTCTaGCTCTACCGACGCCCCACCCTGTGCACTACAGCC +
Preference number: 6 (lower is better)
Translates to: DVSEASRQQPTV*LYRRPTLCTTA
Trigger: GGCTGTAGTGCACAGGGTGGGGCGTCGGTAGAGCCAGACCGTGGGCTGCTGCCTGGACGCCTCGCTGACATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS GCA 72 bp CCCGCCGCCCGCTGCTCTCTGTTGCTCCGGCTGCTTTaGAGAGTTAGGGAGGCTTGGTGTGGGGAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: PAARCSLLLRLL*RVREAWCGELL
Trigger: GAGGAGCTCCCCACACCAAGCCTCCCTAACTCTGCAAAGCAGCCGGAGCAACAGAGAGCAGCGGGCGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS TCA 72 bp AGGTGCCAGGCACTAAGGGAGCCCACGCTGCACACATaGGATGCCGGCACTAGCGCATGTGCCGGCCACATG +
Preference number: 6 (lower is better)
Translates to: RCQALREPTLHT*DAGTSACAGHM
Trigger: CATGTGGCCGGCACATGCGCTAGTGCCGGCATCTCATGTGTGCAGCGTGGGCTCCCTTAGTGCCTGGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS CCA 72 bp TCCCCAGGTAGAGGGATGCCATCACGACCCGCCTCTTaGCTACTCTTATCTGCCCCTCCTGCGCTGGCGGTC +
Preference number: 6 (lower is better)
Translates to: SPGRGMPSRPAS*LLLSAPPALAV
Trigger: GACCGCCAGCGCAGGAGGGGCAGATAAGAGTAGCCAAGAGGCGGGTCGTGATGGCATCCCTCTACCTGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589425.5
CDS CCA 72 bp CCCACTGGTGCCTCTGGTGAAGCGGCAGGCCCCTCCTaGGTGGGCAGAGCAGGTCCTGTTACTCAACTTCCA +
Preference number: 6 (lower is better)
Translates to: PTGASGEAAGPS*VGRAGPVTQLP
Trigger: TGGAAGTTGAGTAACAGGACCTGCTCTGCCCACCCAGGAGGGGCCTGCCGCTTCACCAGAGGCACCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586880.1
ENST00000591996.1
CDS CAA 90 bp GCCGGCACTAGCGCATGTGCCGGCCACATGGGTCCTGGCTCATCTTaGACTCCTCACCGTCCCTTCCCCACAAGCCACCATCCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: AGTSACAGHMGPGSS*TPHRPFPTSHHPKA
Trigger: GGCCTTTGGATGGTGGCTTGTGGGGAAGGGACGGTGAGGAGTCAAAGATGAGCCAGGACCCATGTGGCCGGCACATGCGCTAGTGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS TCA 72 bp GGACCCGCTCCTGCTGTCCCAGGCTGCACACCTCACTaGAGAACTGTCGCTCGATGTGCACATAGGCCGCTC +
Preference number: 6 (lower is better)
Translates to: GPAPAVPGCTPH*RTVARCAHRPL
Trigger: GAGCGGCCTATGTGCACATCGAGCGACAGTTCTTCAGTGAGGTGTGCAGCCTGGGACAGCAGGAGCGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585521.2
CDS GCA 72 bp TCTGGCAGCACACCTGACCCTCAGCCATACTGTCCCTaGAGGGGCTCGCTGGGACACCCAGACTGGAGTCAT +
Preference number: 6 (lower is better)
Translates to: SGSTPDPQPYCP*RGSLGHPDWSH
Trigger: ATGACTCCAGTCTGGGTGTCCCAGCGAGCCCCTGCAGGGACAGTATGGCTGAGGGTCAGGTGTGCTGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586880.1
CDS CCA 72 bp CAGGTTTCTGATCCACTGGAACCGGTGCACGCCTTCTaGACACAGGCAGCAAGGTGGGGAGGTGACCTGGGG +
Preference number: 6 (lower is better)
Translates to: QVSDPLEPVHAF*TQAARWGGDLG
Trigger: CCCCAGGTCACCTCCCCACCTTGCTGCCTGTGTCCAGAAGGCGTGCACCGGTTCCAGTGGATCAGAAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262764.11
ENST00000585521.2
ENST00000586325.5
ENST00000586510.6
ENST00000587356.1
ENST00000588169.5
ENST00000589426.5
ENST00000589689.5
ENST00000592043.5
CDS CAA 72 bp CCTGCTCTGGGAACCTCCGCAGGAGTGGGAGCAGCATaGTGCGGGAGTTCTTCCGGCCTGAACACGGACAGA +
Preference number: 6 (lower is better)
Translates to: PALGTSAGVGAA*CGSSSGLNTDR
Trigger: TCTGTCCGTGTTCAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCCTGCGGAGGTTCCCAGAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588281.5
CDS CAA 90 bp AGACTCGGACCTGCTCTGGGAACCTCCGCAGGAGTGGGAGCAGCATaGTGCGGGAGTTCTTCCGGCCTGAACACGGACAGAGAAAACGGC +
Preference number: 6 (lower is better)
Translates to: RLGPALGTSAGVGAA*CGSSSGLNTDRENG
Trigger: GCCGTTTTCTCTGTCCGTGTTCAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCCTGCGGAGGTTCCCAGAGCAGGTCCGAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588281.5
CDS TCA 72 bp GTCAGCCCAGGGCAGAAGTGCGTTTTGTGGCTGCACTaGGACTCCAGGTCATGCTGGCTGGCCCAGTCTCAC +
Preference number: 6 (lower is better)
Translates to: VSPGQKCVLWLH*DSRSCWLAQSH
Trigger: GTGAGACTGGGCCAGCCAGCATGACCTGGAGTCTCAGTGCAGCCACAAAACGCACTTCTGCCCTGGGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586880.1
CDS GCA 72 bp GCTCTGGGAACCTCCGCAGGAGTGGGAGCAGCATTGTaGGGGAGTTCTTCCGGCCTGAACACGGACAGAGAA +
Preference number: 6 (lower is better)
Translates to: ALGTSAGVGAAL*GSSSGLNTDRE
Trigger: TTCTCTGTCCGTGTTCAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCACTCCTGCGGAGGTTCCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588281.5
CDS GCA 72 bp AGGGCAGCAAGCCAGAGCCACTCTCACGAGCAAACGTaGTCCCCTCCTCCCACGTCTACATCTCCTGCACCA +
Preference number: 6 (lower is better)
Translates to: RAASQSHSHEQT*SPPPTSTSPAP
Trigger: TGGTGCAGGAGATGTAGACGTGGGAGGAGGGGAGCACGTTTGCTCGTGAGAGTGGCTCTGGCTTGCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS GCA 72 bp GGGAGGCTTGGTGTGGGGAGCTCCTCAGGGAGAACCTaGCTAGGACAGCCTCGAAGGTCATCAGCAGAGACA +
Preference number: 6 (lower is better)
Translates to: GRLGVGSSSGRT*LGQPRRSSAET
Trigger: TGTCTCTGCTGATGACCTTCGAGGCTGTCCTAGGCAGGTTCTCCCTGAGGAGCTCCCCACACCAAGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS GCA 72 bp GAGCAGTCAGCCCAGGGCAGAAGTGCGTTTTGTGGCTaGACTGAGACTCCAGGTCATGCTGGCTGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: EQSAQGRSAFCG*TETPGHAGWPS
Trigger: ACTGGGCCAGCCAGCATGACCTGGAGTCTCAGTGCAGCCACAAAACGCACTTCTGCCCTGGGCTGACTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586880.1
CDS CAA 72 bp AGCGCATGTGCCGGCCACATGGGTCCTGGCTCATCTTaGACTCCTCACCGTCCCTTCCCCACAAGCCACCAT +
Preference number: 6 (lower is better)
Translates to: SACAGHMGPGSS*TPHRPFPTSHH
Trigger: ATGGTGGCTTGTGGGGAAGGGACGGTGAGGAGTCAAAGATGAGCCAGGACCCATGTGGCCGGCACATGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS GCA 72 bp TCCCCTCCTCCCACGTCTACATCTCCTGCACCAGTGTaGTCAGCTTGGAGGGGCTCAATCTGCCTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: SPPPTSTSPAPV*SAWRGSICLSA
Trigger: GGCAGAAAGGCAGATTGAGCCCCTCCAAGCTGAGCACACTGGTGCAGGAGATGTAGACGTGGGAGGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS CCA 72 bp CCCACGTCTACATCTCCTGCACCAGTGTGCTCAGCTTaGAGGGGCTCAATCTGCCTTTCTGCCCCCTCATCC +
Preference number: 6 (lower is better)
Translates to: PTSTSPAPVCSA*RGSICLSAPSS
Trigger: GGATGAGGGGGCAGAAAGGCAGATTGAGCCCCTCCAAGCTGAGCACACTGGTGCAGGAGATGTAGACGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS CAA 90 bp AGAAGGGGACTACAGGCTGCCACTGCCGACCCCAGCACAGGCGCCTaGGGACTTAGTGGAGTGGGTACCAGATGGAAAGTGAACAGACTG +
Preference number: 6 (lower is better)
Translates to: RRGLQAATADPSTGA*GLSGVGTRWKVNRL
Trigger: CAGTCTGTTCACTTTCCATCTGGTACCCACTCCACTAAGTCCCAAGGCGCCTGTGCTGGGGTCGGCAGTGGCAGCCTGTAGTCCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS TCA 72 bp GAGTGGGAGCAGCATTGTGCGGGAGTTCTTCCGGCCTaGACACGGACAGAGAAAACGGCACCTGACTCACAA +
Preference number: 6 (lower is better)
Translates to: EWEQHCAGVLPA*TRTEKTAPDSQ
Trigger: TTGTGAGTCAGGTGCCGTTTTCTCTGTCCGTGTTCAGGCCGGAAGAACTCCCGCACAATGCTGCTCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588281.5
CDS GCA 72 bp AATTCTGGAACCAGGTTTCTGATCCACTGGAACCGGTaGACGCCTTCTGGACACAGGCAGCAAGGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: NSGTRFLIHWNR*TPSGHRQQGGE
Trigger: CTCCCCACCTTGCTGCCTGTGTCCAGAAGGCGTGCACCGGTTCCAGTGGATCAGAAACCTGGTTCCAGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262764.11
ENST00000585521.2
ENST00000586325.5
ENST00000586510.6
ENST00000587356.1
ENST00000588169.5
ENST00000589426.5
ENST00000589689.5
ENST00000592043.5
CDS CCA 72 bp GTGCACATCAGAAGAAACAAGCCAAGAGTGGCTGCCTaGGGGAAGGGAGGGCAGGAAATGGCCGCAGTATTG +
Preference number: 6 (lower is better)
Translates to: VHIRRNKPRVAA*GKGGQEMAAVL
Trigger: CAATACTGCGGCCATTTCCTGCCCTCCCTTCCCCCAGGCAGCCACTCTTGGCTTGTTTCTTCTGATGTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS CCA 72 bp CCACCTATCCCCAGCCACTCAAACTGCAGGTCTGCCTaGTGCGGAAGCTGCAACTGTCCTTGTCTAAGACCA +
Preference number: 6 (lower is better)
Translates to: PPIPSHSNCRSA*CGSCNCPCLRP
Trigger: TGGTCTTAGACAAGGACAGTTGCAGCTTCCGCACCAGGCAGACCTGCAGTTTGAGTGGCTGGGGATAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS CAA 72 bp CAGGAACACGTAGCGGTCCCGCTCAAGATGACGCTGTaGTCGAAGAGGTACACCTTAATGTGCTGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: QEHVAVPLKMTL*SKRYTLMCWRP
Trigger: CGGCCTCCAGCACATTAAGGTGTACCTCTTCGACAACAGCGTCATCTTGAGCGGGACCGCTACGTGTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587356.1
CDS GCA 72 bp CCGAGAGCCTCTCTCCAAACAGAAACCCAGTGCCCCTaGACATTCCTTTGGCTCCTCCAGTCTAATTGTCCC +
Preference number: 6 (lower is better)
Translates to: PRASLQTETQCP*TFLWLLQSNCP
Trigger: GGGACAATTAGACTGGAGGAGCCAAAGGAATGTGCAGGGGCACTGGGTTTCTGTTTGGAGAGAGGCTCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS CAA 90 bp GACAGAGGGAGCAGTGTGCGCTGCGGGAACGGCACTGCAGATAGATaGCTTAAGCCTGGCTGTGGCATAATGATATTTACTCTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: DRGSSVRCGNGTADR*LKPGCGIMIFTLVP
Trigger: TGGGACCAGAGTAAATATCATTATGCCACAGCCAGGCTTAAGCAATCTATCTGCAGTGCCGTTCCCGCAGCGCACACTGCTCCCTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS GCA 72 bp GCTGCCATGCCCTGTAGCCCAGGAAGCTTCTCTCTGTaGAAGGGTCAAGCACCTGAAGATGATAAAGAGATC +
Preference number: 6 (lower is better)
Translates to: AAMPCSPGSFSL*KGQAPEDDKEI
Trigger: GATCTCTTTATCATCTTCAGGTGCTTGACCCTTGCACAGAGAGAAGCTTCCTGGGCTACAGGGCATGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS GCA 72 bp TTCCAGGCAGTCCACCTTCATGAGCTCGAAAAACTCTaGCGGGGAAGAAAGCACCCTAACGTGAGAACTGGA +
Preference number: 6 (lower is better)
Translates to: FQAVHLHELEKL*RGRKHPNVRTG
Trigger: TCCAGTTCTCACGTTAGGGTGCTTTCTTCCCCGGCAGAGTTTTTCGAGCTCATGAAGGTGGACTGCCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000588169.5
ENST00000589426.5
ENST00000589689.5
CDS CAA 72 bp AGCAGTGTGCGCTGCGGGAACGGCACTGCAGATAGATaGCTTAAGCCTGGCTGTGGCATAATGATATTTACT +
Preference number: 6 (lower is better)
Translates to: SSVRCGNGTADR*LKPGCGIMIFT
Trigger: AGTAAATATCATTATGCCACAGCCAGGCTTAAGCAATCTATCTGCAGTGCCGTTCCCGCAGCGCACACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS TCA 72 bp ACCGTAATAACTAGTTGGAAGGCAAACAGTGTTAACTaGTGTGATGTGCTGCTGTCCAGGGCACTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: TVITSWKANSVN*CDVLLSRALWP
Trigger: TGGCCACAGTGCCCTGGACAGCAGCACATCACATCAGTTAACACTGTTTGCCTTCCAACTAGTTATTACGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591996.1
CDS GCA 72 bp ATGATATTTACTCTGGTCCCACAGAATCTGGAGGAATaGGAACTCTGTTTACCGAGAGCCTCTCTCCAAACA +
Preference number: 6 (lower is better)
Translates to: MIFTLVPQNLEE*ELCLPRASLQT
Trigger: TGTTTGGAGAGAGGCTCTCGGTAAACAGAGTTCGCATTCCTCCAGATTCTGTGGGACCAGAGTAAATATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591996.1