RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PGM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000079739

Ensembl transcript IDs: ENST00000371083.4, ENST00000371084.8, ENST00000473117.2, ENST00000483707.1, ENST00000540265.5, ENST00000650546.1

Found 437 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTaGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAA +
Preference number: 1 (lower is better)
Translates to: ARRSSFPHSSQGHLV*QCLVNALLVNWLVK
Trigger: TTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR TCA 90 bp ATGCTTGGTGAATACATTTTGTTTCTGTCATGCTCTTCAATCAGATaGCTTGGATGGGTCCGGGGGTGGAGGGACGTACCACATCAGGCC +
Preference number: 1 (lower is better)
Translates to: MLGEYILFLSCSSIR*LGWVRGWRDVPHQA
Trigger: GGCCTGATGTGGTACGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAAACAAAATGTATTCACCAAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR GCA 90 bp AGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTaGCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCA +
Preference number: 1 (lower is better)
Translates to: RSSFPHSSQGHLVWQ*LVNALLVNWLVKKS
Trigger: TGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR CCA 90 bp GGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTaGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGTGAATACATT +
Preference number: 1 (lower is better)
Translates to: GHLVWQCLVNALLVN*LVKKSNPKMLGEYI
Trigger: AATGTATTCACCAAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CCA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTGGATGGGTCCGGGGGTaGAGGGACGTACCACATCAG +
Preference number: 2 (lower is better)
Translates to: PSQLPRASCLAVPCKCTAGWVRG*RDVPHQ
Trigger: CTGATGTGGTACGTCCCTCCACCCCCGGACCCATCC...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR TCA 90 bp GAGATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGCTCTTCAATCAGATaGCTTGGATGGGTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: EIDLSPQVLFPSQLPRASCSSIR*LGWVRG
Trigger: CCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCA...AGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CCA 90 bp GCTAAGGAGACAAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATGGATGGGTCCGGGGGTaGAGGGACGTACCACATCAG +
Preference number: 2 (lower is better)
Translates to: AKETNTHAAAMQEGMKRNGWVRG*RDVPHQ
Trigger: CTGATGTGGTACGTCCCTCCACCCCCGGACCCATCC...ATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTTGTCTCCTTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR CAA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTaGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAA +
Preference number: 2 (lower is better)
Translates to: SPQVLFPSQLPRASC*AVPCKCTARQLVSE
Trigger: TTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CCA 90 bp GTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAGGATGGGTCCGGGGGTaGAGGGACGTACCACATCAG +
Preference number: 2 (lower is better)
Translates to: VWQCLVNALLVNWLVKKSGWVRG*RDVPHQ
Trigger: CTGATGTGGTACGTCCCTCCACCCCCGGACCCATCC...TGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR TCA 90 bp AAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATTGAGATTGATCTGCTCTTCAATCAGATaGCTTGGATGGGTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: KYPRSSNAGGHEKELRLICSSIR*LGWVRG
Trigger: CCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCA...GATCAATCTCAATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR GCA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGGCAGTGCCTTGTAAATaGACTGCTCGTCAACTGGTT +
Preference number: 2 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALAVPCK*TARQLV
Trigger: AACCAGTTGACGAGCAGTGCATTTACAAGGCACTGC...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR TCA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAATGCTCTTCAATCAGATaGCTTGGATGGGTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKCSSIR*LGWVRG
Trigger: CCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCA...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR TCA 90 bp AGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCTGCTCTTCAATCAGATaGCTTGGATGGGTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: RKELAPSFHCHILRMKNGCSSIR*LGWVRG
Trigger: CCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCA...GCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR TCA 90 bp AGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCGGCCTCACTCACTGCTaGTGCTCCACCTATAGCTTA +
Preference number: 2 (lower is better)
Translates to: RKELAPSFHCHILRMKNGGLTHC*CSTYSL
Trigger: TAAGCTATAGGTGGAGCATCAGCAGTGAGTGAGGCC...GCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR GCA 90 bp GTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGTGATGACAGTGGGTaGAGTGCGTCCCGTCCTCTC +
Preference number: 2 (lower is better)
Translates to: VNALLVNWLVKKSNPKMLGDDSG*SASRPL
Trigger: GAGAGGACGGGACGCACTGCACCCACTGTCATCACC...AAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650546.1
3UTR-3UTR CCA 90 bp AAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATTGAGATTGATCCAAGGGCATCTTGTTTaGCAGTGCCTTGTAAATGCA +
Preference number: 2 (lower is better)
Translates to: KYPRSSNAGGHEKELRLIQGHLV*QCLVNA
Trigger: TGCATTTACAAGGCACTGCCAAACAAGATGCCCTTG...GATCAATCTCAATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR CAA 90 bp GGGGAAAGATTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATaGCCACATCCTAAGGATGAAGAATGGCCTCACTCACTGCTGATG +
Preference number: 2 (lower is better)
Translates to: GERFTKEKGTCTIIS*PHPKDEEWPHSLLM
Trigger: CATCAGCAGTGAGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAATCTTTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR GCA 90 bp GAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCCTCACTCATCTTGTTTGGCAGTaGCTTGTAAATGCACTGCTC +
Preference number: 2 (lower is better)
Translates to: ELAPSFHCHILRMKNGLTHLVWQ*LVNALL
Trigger: GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATG...AGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CCA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATTCAATCAGATGACTTaGATGGGTCCGGGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: RKELIGQKALEIAFCWVTFNQMT*MGPGVE
Trigger: CTCCACCCCCGGACCCATCCAAGTCATCTGATTGAA...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CCA 90 bp AAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATTCAATCAGATGACTTaGATGGGTCCGGGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: KEKGTCTIISLPHPKDEEFNQMT*MGPGVE
Trigger: CTCCACCCCCGGACCCATCCAAGTCATCTGATTGAA...TTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR GCA 90 bp CTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTGCAGTGCCTTGTAAATaGACTGCTCGTCAACTGGTT +
Preference number: 2 (lower is better)
Translates to: LTQRKELIGQKALEIAFCAVPCK*TARQLV
Trigger: AACCAGTTGACGAGCAGTGCATTTACAAGGCACTGC...ACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CCA 90 bp AAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATTGAGATTGATCGCACTGCTCGTCAACTaGTTAGTGAAAAAGTCAAAT +
Preference number: 2 (lower is better)
Translates to: KYPRSSNAGGHEKELRLIALLVN*LVKKSN
Trigger: ATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGC...GATCAATCTCAATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR GCA 90 bp GAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACCATCTTGTTTGGCAGTaGCTTGTAAATGCACTGCTC +
Preference number: 2 (lower is better)
Translates to: EERTDWTEGTRNCILLGYHLVWQ*LVNALL
Trigger: GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATG...GTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR GCA 90 bp CTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTCATCTTGTTTGGCAGTaGCTTGTAAATGCACTGCTC +
Preference number: 2 (lower is better)
Translates to: LTQRKELIGQKALEIAFCHLVWQ*LVNALL
Trigger: GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATG...ACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR GCA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAAAAGAGAAAGGAACTTaGACCATCATTTCATTGCCA +
Preference number: 2 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRKEKGT*TIISLP
Trigger: TGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CCA 90 bp CAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGCAAGGGCATCTTGTTTaGCAGTGCCTTGTAAATGCA +
Preference number: 2 (lower is better)
Translates to: QKRKELAPSFHCHILRMKQGHLV*QCLVNA
Trigger: TGCATTTACAAGGCACTGCCAAACAAGATGCCCTTG...CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR GCA 90 bp GAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACGCACCATCATTTCATTaGCACATCCTAAGGATGAAG +
Preference number: 2 (lower is better)
Translates to: EERTDWTEGTRNCILLGYAPSFH*HILRMK
Trigger: CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGC...GTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CCA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACAGCACTGCTCGTCAACTaGTTAGTGAAAAAGTCAAAT +
Preference number: 2 (lower is better)
Translates to: RKELIGQKALEIAFCWVTALLVN*LVKKSN
Trigger: ATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGC...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CAA 90 bp TCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGCTTCAATCAGATGACTaGGATGGGTCCGGGGGTGGA +
Preference number: 3 (lower is better)
Translates to: SQGHLVWQCLVNALLVNWLQSDD*DGSGGG
Trigger: TCCACCCCCGGACCCATCCAAGTCATCTGATTGAAG...CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR CCA 72 bp TCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTaGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGG +
Preference number: 3 (lower is better)
Translates to: SSFPHSSQGHLV*QCLVNALLVNW
Trigger: CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CAA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTCTTCAATCAGATGACTaGGATGGGTCCGGGGGTGGA +
Preference number: 3 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTLQSDD*DGSGGG
Trigger: TCCACCCCCGGACCCATCCAAGTCATCTGATTGAAG...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR GCA 72 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTaGCTTGTAAATGCACTGCTCGTCAACTGGTTAGTG +
Preference number: 3 (lower is better)
Translates to: FPHSSQGHLVWQ*LVNALLVNWLV
Trigger: CACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CAA 90 bp GTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCACTTCAATCAGATGACTaGGATGGGTCCGGGGGTGGA +
Preference number: 3 (lower is better)
Translates to: VWQCLVNALLVNWLVKKSLQSDD*DGSGGG
Trigger: TCCACCCCCGGACCCATCCAAGTCATCTGATTGAAG...TGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CAA 90 bp TCTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGCTTCAATCAGATGACTaGGATGGGTCCGGGGGTGGA +
Preference number: 3 (lower is better)
Translates to: SHSEERTDWTEGTRNCILLQSDD*DGSGGG
Trigger: TCCACCCCCGGACCCATCCAAGTCATCTGATTGAAG...CAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR TCA 72 bp CACATCCTAAGGATGAAGAATGGCCTCACTCACTGCTaGTGCTCCACCTATAGCTTACATTGTAGTGTAAAC +
Preference number: 3 (lower is better)
Translates to: HILRMKNGLTHC*CSTYSLHCSVN
Trigger: GTTTACACTACAATGTAAGCTATAGGTGGAGCATCAGCAGTGAGTGAGGCCATTCTTCATCCTTAGGATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CAA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACACCAAGGGCATCTTGTTaGGCAGTGCCTTGTAAATGC +
Preference number: 3 (lower is better)
Translates to: RKELIGQKALEIAFCWVTPRASC*AVPCKC
Trigger: GCATTTACAAGGCACTGCCAAACAAGATGCCCTTGG...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR-3UTR CAA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAAAAAGAGAAAGGAACTaGCACCATCATTTCATTGCC +
Preference number: 3 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRKRERN*HHHFIA
Trigger: GGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTT...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR GCA 72 bp TCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTaGCACATCCTAAGGATGAAGAATGGCCTCACTCAC +
Preference number: 3 (lower is better)
Translates to: SQKRKELAPSFH*HILRMKNGLTH
Trigger: GTGAGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR CCA 72 bp GTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTaGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGT +
Preference number: 3 (lower is better)
Translates to: VWQCLVNALLVN*LVKKSNPKMLG
Trigger: ACCAAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTGGCCTCCTGCCGCTaGGCCGGCTCCACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RRSSFPHSSQGHLVWQCLVASCR*AGSTVE
Trigger: CTCCACCGTGGAGCCGGCGCAGCGGCAGGAGGCCAC...AAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGGGGAGGAGCGGGAGGTaGAAACCGAGGCGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: SPQVLFPSQLPRASCLAVGRSGR*KPRRQR
Trigger: GCGCTGCCGCCTCGGTTTCCACCTCCCGCTCCTCCC...CACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS-3UTR CCA 90 bp TTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGTCAGAGCGGCGGACTTaGCTGGCGGAGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: FCHALQSDDLDGSGGGGTSERRT*LAEGRP
Trigger: CGGCCGCCCCTCCGCCAGCCAAGTCCGCCGCTCTGA...CGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR GCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTGTGGCCTCCTGCCGCTaGGCCGGCTCCACGGTGGAG +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCVASCR*AGSTVE
Trigger: CTCCACCGTGGAGCCGGCGCAGCGGCAGGAGGCCAC...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR GCA 90 bp TCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTACCAGCGTGGCCTCCTaGCGCTGCGCCGGCTCCACG +
Preference number: 4 (lower is better)
Translates to: SQLPRASCLAVPCKCTARTSVAS*RCAGST
Trigger: CGTGGAGCCGGCGCAGCGGCAGGAGGCCACGCTGGT...ACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR GCA 90 bp CGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTCCCCGGCACTCCCAGTaGCGCTCAGTCGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: RRSSFPHSSQGHLVWQCLPRHSQ*RSVGRR
Trigger: TCGTCTTCCGACTGAGCGGCACTGGGAGTGCCGGGG...AAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTTCAGGCGAGCAGGTCTaGCGGGTCCCGTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: RRSSFPHSSQGHLVWQCLSGEQV*RVPWPL
Trigger: AAGTGGCCACGGGACCCGGCAGACCTGCTCGCCTGA...AAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS-3UTR GCA 90 bp CCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCATGGTGGCGACTTGCTaGCGGGGGTCAGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: PHSSQGHLVWQCLVNALLMVATC*RGSERR
Trigger: CCGCCGCTCTGACCCCCGGCAGCAAGTCGCCACCAT...GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR GCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTATGGTGGCGACTTGCTaGCGGGGGTCAGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCMVATC*RGSERR
Trigger: CCGCCGCTCTGACCCCCGGCAGCAAGTCGCCACCAT...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR GCA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTTCCGCAGCCCGCTCGTaGCCGGCTTCTGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PSQLPRASCLAVPCKCTASAARS*PASGPG
Trigger: ACCAGGACCAGAAGCCGGGCACGAGCGGGCTGCGGA...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR GCA 90 bp CGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTCACCACTCGTGGGCATaGTCCGTGCAAAGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: RRSSFPHSSQGHLVWQCLHHSWA*SVQSRG
Trigger: TCCGCGGCTTTGCACGGAGCATGCCCACGAGTGGTG...AAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp CGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTCGATGTACAGCCGAATaGTGGCCCCGGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: RRSSFPHSSQGHLVWQCLRCTAE*WPRHSQ
Trigger: CTGGGAGTGCCGGGGCCACCATTCGGCTGTACATCG...AAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAGATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTCACCACTCGTGGGCATaGTCCGTGCAAAGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: EIDLSPQVLFPSQLPRASHHSWA*SVQSRG
Trigger: TCCGCGGCTTTGCACGGAGCATGCCCACGAGTGGTG...AGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAATCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGGGATGGGTCCGGGGGTaGAGGGACGTACCACATCAG +
Preference number: 4 (lower is better)
Translates to: FCHALQSDDLDGSGGGGTGWVRG*RDVPHQ
Trigger: CTGATGTGGTACGTCCCTCCACCCCCGGACCCATCC...CGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGCGTGGGCATGCTCCGTaGAAAGCCGCGGACCCCAGT +
Preference number: 4 (lower is better)
Translates to: SQGHLVWQCLVNALLVNWRGHAP*KAADPS
Trigger: ACTGGGGTCCGCGGCTTTGCACGGAGCATGCCCACG...CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTCACCACTCGTGGGCATaGTCCGTGCAAAGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCHHSWA*SVQSRG
Trigger: TCCGCGGCTTTGCACGGAGCATGCCCACGAGTGGTG...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGATGTCCTCCACACTCTaGTTGCGGGTGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: SPQVLFPSQLPRASCLAVMSSTL*LRVARM
Trigger: CATCCTAGCCACCCGCAAGCAGAGTGTGGAGGACAT...CACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGGCTCTCCTGACTTCATaGTCTCCACCAGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPQVLFPSQLPRASCLAVALLTS*SPPGQL
Trigger: CAGCTGACCTGGTGGAGACCATGAAGTCAGGAGAGC...CACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTGTCTGGGGGTCCTaGTTAATCTTGGCAACGTCC +
Preference number: 4 (lower is better)
Translates to: SPQVLFPSQLPRASCLAVPVWGS*LILATS
Trigger: GGACGTTGCCAAGATTAACCAGGACCCCCAGACAGG...CACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650546.1
CDS-3UTR TCA 90 bp CCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGGTCAGCTGCATAGGTaGGGTTGGGGTCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PHSSQGHLVWQCLVNALLGQLHR*GWGQGG
Trigger: ACCACCCTGACCCCAACCTCACCTATGCAGCTGACC...GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGGACAGCCACAGAGTCTaGAGGGTTCACAAAGAACCC +
Preference number: 4 (lower is better)
Translates to: SPQVLFPSQLPRASCLAVDSHRV*RVHKEP
Trigger: GGGTTCTTTGTGAACCCTTCAGACTCTGTGGCTGTC...CACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTCCGCGTAGTTGGCGCTaGTCTGGAACACCTTCACCC +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCPRSWR*SGTPSP
Trigger: GGGTGAAGGTGTTCCAGAGCAGCGCCAACTACGCGG...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR GCA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTCCCCGGCACTCCCAGTaGCGCTCAGTCGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTPRHSQ*RSVGRR
Trigger: TCGTCTTCCGACTGAGCGGCACTGGGAGTGCCGGGG...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTAGCGACCGATCCCGTTaGCGGCAGCGATGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTSDRSR*RQRCER
Trigger: TCGCTCGCATCGCTGCCGCCAACGGGATCGGTCGCT...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp CGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGCTCTCCTGACTTCATaGTCTCCACCAGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RRSSFPHSSQGHLVWQCLALLTS*SPPGQL
Trigger: CAGCTGACCTGGTGGAGACCATGAAGTCAGGAGAGC...AAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTCCAGAGCACCACTCGTaGGCATGCTCCGTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCPEHHS*ACSVQS
Trigger: GCTTTGCACGGAGCATGCCCACGAGTGGTGCTCTGG...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGTCTTTCTCACGGATGTaGTCAGAACCGGTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SPQVLFPSQLPRASCLAVSFSRM*SEPVPK
Trigger: CTTCGGGACCGGTTCTGACCACATCCGTGAGAAAGA...CACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTGTACAGCCGAATGGTaGCCCCGGCACTCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SQGHLVWQCLVNALLVNWCTAEW*PRHSQC
Trigger: GCACTGGGAGTGCCGGGGCCACCATTCGGCTGTACA...CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGATGACCTGGGGGTCCTaGTTAATCTTGGCAACGTCC +
Preference number: 4 (lower is better)
Translates to: SPQVLFPSQLPRASCLAVMTWGS*LILATS
Trigger: GGACGTTGCCAAGATTAACCAGGACCCCCAGGTCAT...CACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
CDS-3UTR CCA 90 bp CGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGGGGCCAACATGACCTaGGGGTCCTGGTTAATCTTG +
Preference number: 4 (lower is better)
Translates to: RRSSFPHSSQGHLVWQCLGANMT*GSWLIL
Trigger: CAAGATTAACCAGGACCCCCAGGTCATGTTGGCCCC...AAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
CDS-3UTR CCA 90 bp TCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGGGATGGGTCCGGGGGTaGAGGGACGTACCACATCAG +
Preference number: 4 (lower is better)
Translates to: SQGHLVWQCLVNALLVNWGWVRG*RDVPHQ
Trigger: CTGATGTGGTACGTCCCTCCACCCCCGGACCCATCC...CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTGGTCAGCTGCATAGGTaGGGTTGGGGTCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SQLPRASCLAVPCKCTARGQLHR*GWGQGG
Trigger: ACCACCCTGACCCCAACCTCACCTATGCAGCTGACC...ACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTACCAGCGTGGCCTCCTaGCGCTGCGCCGGCTCCACG +
Preference number: 4 (lower is better)
Translates to: QCLVNALLVNWLVKKSNPTSVAS*RCAGST
Trigger: CGTGGAGCCGGCGCAGCGGCAGGAGGCCACGCTGGT...AGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR GCA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCCCGTCCTCTCCTaGAGCTGGGACACTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PSQLPRASCLAVPCKCTARPVLS*SWDTFR
Trigger: TCTGAAAGTGTCCCAGCTGCAGGAGAGGACGGGACG...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCAGAGCGGCGGACTTaGCTGGCGGAGGGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: LAVPCKCTARQLVSEKVKSERRT*LAEGRP
Trigger: CGGCCGCCCCTCCGCCAGCCAAGTCCGCCGCTCTGA...TTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp TGTTTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGTCACGATCTTCACCATaGTGGCGACTTGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: CFCHALQSDDLDGSGGGGSRSSP*WRLAAG
Trigger: CCCGGCAGCAAGTCGCCACCATGGTGAAGATCGTGA...CCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCCCGGCTTCTGGTCCTaGTACGCCTGGGTCTTAACT +
Preference number: 4 (lower is better)
Translates to: PSQLPRASCLAVPCKCTAPGFWS*YAWVLT
Trigger: AGTTAAGACCCAGGCGTACCAGGACCAGAAGCCGGG...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCCAGAGCACCACTCGTaGGCATGCTCCGTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALPEHHS*ACSVQS
Trigger: GCTTTGCACGGAGCATGCCCACGAGTGGTGCTCTGG...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTCGATGTACAGCCGAATaGTGGCCCCGGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTRCTAE*WPRHSQ
Trigger: CTGGGAGTGCCGGGGCCACCATTCGGCTGTACATCG...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGAGGAACGCAGTTAACTaGCGAGTTCGCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: SQGHLVWQCLVNALLVNWRNAVN*RVRRGT
Trigger: GGTGCCCCTGCGAACTCGGCAGTTAACTGCGTTCCT...CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGCCTCCACACTCTGCTTaGGGGTGGCTAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: SQGHLVWQCLVNALLVNWPPHSA*GWLGWR
Trigger: TCTCCATCCTAGCCACCCGCAAGCAGAGTGTGGAGG...CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTATGTCCTCCACACTCTaGTTGCGGGTGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCMSSTL*LRVARM
Trigger: CATCCTAGCCACCCGCAAGCAGAGTGTGGAGGACAT...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCTTCATCATTTTGTTTaGGCCCTCAGCTTCCACCTC +
Preference number: 4 (lower is better)
Translates to: SPQVLFPSQLPRASCLAVLHHFV*ALSFHL
Trigger: GAGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAG...CACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGAAGGCGACAGCACTCTaGGCCGTAATCGTATCTTCC +
Preference number: 4 (lower is better)
Translates to: FCHALQSDDLDGSGGGGTKATAL*AVIVSS
Trigger: GGAAGATACGATTACGGCGCAGAGTGCTGTCGCCTT...CGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS-3UTR CCA 90 bp GCTAAGGAGACAAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATCGATCTTCACCATGGTaGCGACTTGCTGCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: AKETNTHAAAMQEGMKRNRSSPW*RLAAGG
Trigger: ACCCCCGGCAGCAAGTCGCCACCATGGTGAAGATCG...ATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTTGTCTCCTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp GCTAAGGAGACAAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATTCCATTGGGGCCCCCTaGGTTGTGACTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: AKETNTHAAAMQEGMKRNSIGAP*VVTGCQ
Trigger: CTGACAGCCAGTCACAACCCAGGGGGCCCCAATGGA...ATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTTGTCTCCTTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GAGATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTCGGACCCCAGTCTGCTaGAAATACGGAATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: EIDLSPQVLFPSQLPRASRTPVC*KYGMLK
Trigger: CTTCAGCATTCCGTATTTCCAGCAGACTGGGGTCCG...AGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCGTCTGCCGGGTCCCGTaGCCACTTTCCCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: RKELAPSFHCHILRMKNGVCRVP*PLSPAR
Trigger: CCGGGCTGGGGAAAGTGGCCACGGGACCCGGCAGAC...GCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS-3UTR TCA 90 bp CCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGACAGCCACAGAGTCTaGAGGGTTCACAAAGAACCC +
Preference number: 4 (lower is better)
Translates to: PHSSQGHLVWQCLVNALLDSHRV*RVHKEP
Trigger: GGGTTCTTTGTGAACCCTTCAGACTCTGTGGCTGTC...GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp GAGATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTAGATGTTGGCAGCAATaGCAGCCACAGAGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: EIDLSPQVLFPSQLPRASRCWQQ*QPQSLK
Trigger: CTTCAGACTCTGTGGCTGTCATTGCTGCCAACATCT...AGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGTAGATGTTGGCAGCAATaGCAGCCACAGAGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVMLFNQMTWMGPGVEGRRCWQQ*QPQSLK
Trigger: CTTCAGACTCTGTGGCTGTCATTGCTGCCAACATCT...ACGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTTGCTCTTCAATCAGATaGCTTGGATGGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SQLPRASCLAVPCKCTARCSSIR*LGWVRG
Trigger: CCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCA...ACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTGGCCTCACTCACTGCTaGTGCTCCACCTATAGCTTA +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCGLTHC*CSTYSL
Trigger: TAAGCTATAGGTGGAGCATCAGCAGTGAGTGAGGCC...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGAGGTGGATGTTGCAGTaGGCTGAGATTGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: FCHALQSDDLDGSGGGGTRWMLQ*AEIVPL
Trigger: CAATGGCACAATCTCAGCTCACTGCAACATCCACCT...CGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650546.1
CDS-3UTR GCA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTAGGAACGCAGTTAACTaGCGAGTTCGCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTRNAVN*RVRRGT
Trigger: GGTGCCCCTGCGAACTCGGCAGTTAACTGCGTTCCT...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GCTAAGGAGACAAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATCCTCCACACTCTGCTTaGGGGTGGCTAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: AKETNTHAAAMQEGMKRNPPHSA*GWLGWR
Trigger: TCTCCATCCTAGCCACCCGCAAGCAGAGTGTGGAGG...ATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTTGTCTCCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTCCTCCACACTCTGCTTaGGGGTGGCTAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTPPHSA*GWLGWR
Trigger: TCTCCATCCTAGCCACCCGCAAGCAGAGTGTGGAGG...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGTGATAGCTCCAAGGAGTaGTGCATGCAGCCAACTTCA +
Preference number: 4 (lower is better)
Translates to: SVMLFNQMTWMGPGVEGRDSSKE*CMQPTS
Trigger: TGAAGTTGGCTGCATGCAGCACTCCTTGGAGCTATC...ACGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR GCA 90 bp TCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGTCCAGAAGGTGGATGTTaGAGTGAGCTGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: SVMLFNQMTWMGPGVEGRPEGGC*SELRLC
Trigger: GCACAATCTCAGCTCACTGCAACATCCACCTTCTGG...ACGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650546.1
CDS-3UTR CCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTGGTCCTGGTACGCCTaGGTCTTAACTGTCACGATC +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCWSWYA*VLTVTI
Trigger: GATCGTGACAGTTAAGACCCAGGCGTACCAGGACCA...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp GCTAAGGAGACAAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATCCCGGCTTCTGGTCCTaGTACGCCTGGGTCTTAACT +
Preference number: 4 (lower is better)
Translates to: AKETNTHAAAMQEGMKRNPGFWS*YAWVLT
Trigger: AGTTAAGACCCAGGCGTACCAGGACCAGAAGCCGGG...ATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTTGTCTCCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp CCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCTTCCAAAATCTCCATTaGGGCCCCCTGGGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: PHSSQGHLVWQCLVNALLFQNLH*GPLGCD
Trigger: GTCACAACCCAGGGGGCCCCAATGGAGATTTTGGAA...GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATTGAGATTGATCTGTACAGCCGAATGGTaGCCCCGGCACTCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: KYPRSSNAGGHEKELRLICTAEW*PRHSQC
Trigger: GCACTGGGAGTGCCGGGGCCACCATTCGGCTGTACA...GATCAATCTCAATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGATGTACAGCCGAATGGTaGCCCCGGCACTCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRCTAEW*PRHSQC
Trigger: GCACTGGGAGTGCCGGGGCCACCATTCGGCTGTACA...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR CAA 72 bp GTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTaGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTG +
Preference number: 4 (lower is better)
Translates to: VLFPSQLPRASC*AVPCKCTARQL
Trigger: CAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGAAAATCATGCTCTCCTaGCTTCATGGTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: FCHALQSDDLDGSGGGGTKIMLS*LHGLHQ
Trigger: CTGGTGGAGACCATGAAGTCAGGAGAGCATGATTTT...CGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATACGGAGAGTCGGGCGTaGCCTTGGGAGGCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: FTKEKGTCTIISLPHPKDTESRA*PWEAPR
Trigger: GCGCGGAGCCTCCCAAGGTCACGCCCGACTCTCCGT...ATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS-3UTR GCA 90 bp GCTAAGGAGACAAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATATGTCCTCCACACTCTaGTTGCGGGTGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: AKETNTHAAAMQEGMKRNMSSTL*LRVARM
Trigger: CATCCTAGCCACCCGCAAGCAGAGTGTGGAGGACAT...ATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTTGTCTCCTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTATGTCCTCCACACTCTaGTTGCGGGTGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTMSSTL*LRVARM
Trigger: CATCCTAGCCACCCGCAAGCAGAGTGTGGAGGACAT...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGTTCATTTGCTGAGAACTaGTTCCCCACAAAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: SVMLFNQMTWMGPGVEGRSFAEN*FPTKER
Trigger: TCGCTCCTTTGTGGGGAAGCAGTTCTCAGCAAATGA...ACGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTCCCCGGCACTCCCAGTaGCGCTCAGTCGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: QCLVNALLVNWLVKKSNPPRHSQ*RSVGRR
Trigger: TCGTCTTCCGACTGAGCGGCACTGGGAGTGCCGGGG...AGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGTGATGACAGTGGGTaGAGTGCGTCCCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRGDDSG*SASRPL
Trigger: GAGAGGACGGGACGCACTGCACCCACTGTCATCACC...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAACTCGTGCCCGGCTTCTaGTCCTGGTACGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LAVPCKCTARQLVSEKVKLVPGF*SWYAWV
Trigger: GACCCAGGCGTACCAGGACCAGAAGCCGGGCACGAG...TTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp TGTTTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGAGGATACAGCAGGGGTaGAGAGGATTCCATTCTGTC +
Preference number: 4 (lower is better)
Translates to: CFCHALQSDDLDGSGGGGRIQQG*RGFHSV
Trigger: GACAGAATGGAATCCTCTCCACCCCTGCTGTATCCT...CCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTTCTTTCTCACGGATGTaGTCAGAACCGGTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SQLPRASCLAVPCKCTARSFSRM*SEPVPK
Trigger: CTTCGGGACCGGTTCTGACCACATCCGTGAGAAAGA...ACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGTTCAATCAGATGACTTaGATGGGTCCGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALFNQMT*MGPGVE
Trigger: CTCCACCCCCGGACCCATCCAAGTCATCTGATTGAA...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAACAGCGATGCGAGCGATaGGCTGGATGGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKQRCER*AGWPPS
Trigger: TGAAGGAGGCCATCCAGCTCATCGCTCGCATCGCTG...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR TCA 90 bp GAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCCTCACTGGTCAGCTGCATAGGTaGGGTTGGGGTCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ELAPSFHCHILRMKNGLTGQLHR*GWGQGG
Trigger: ACCACCCTGACCCCAACCTCACCTATGCAGCTGACC...AGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTATGAGGCGCAAGCCCTaGTTTCTTGAAATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PSQLPRASCLAVPCKCTAMRRKP*FLEMLP
Trigger: TGGAAGCATTTCAAGAAATCAGGGCTTGCGCCTCAT...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp CCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCATGAGGCGCAAGCCCTaGTTTCTTGAAATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PHSSQGHLVWQCLVNALLMRRKP*FLEMLP
Trigger: TGGAAGCATTTCAAGAAATCAGGGCTTGCGCCTCAT...GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp GCTAAGGAGACAAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATGGCCTCACTCACTGCTaGTGCTCCACCTATAGCTTA +
Preference number: 4 (lower is better)
Translates to: AKETNTHAAAMQEGMKRNGLTHC*CSTYSL
Trigger: TAAGCTATAGGTGGAGCATCAGCAGTGAGTGAGGCC...ATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTTGTCTCCTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGACCATGGTGGCGACTTaGTGCCGGGGGTCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: QKRKELAPSFHCHILRMKTMVAT*CRGSER
Trigger: CCGCTCTGACCCCCGGCAGCAAGTCGCCACCATGGT...CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR GCA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAAGGAACGCAGTTAACTaGCGAGTTCGCAGGGGCACC +
Preference number: 4 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRRNAVN*RVRRGT
Trigger: GGTGCCCCTGCGAACTCGGCAGTTAACTGCGTTCCT...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGCGTGGGCATGCTCCGTaGAAAGCCGCGGACCCCAGT +
Preference number: 4 (lower is better)
Translates to: QKRKELAPSFHCHILRMKRGHAP*KAADPS
Trigger: ACTGGGGTCCGCGGCTTTGCACGGAGCATGCCCACG...CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTCGTGGGCATGCTCCGTaGAAAGCCGCGGACCCCAGT +
Preference number: 4 (lower is better)
Translates to: LTQRKELIGQKALEIAFCRGHAP*KAADPS
Trigger: ACTGGGGTCCGCGGCTTTGCACGGAGCATGCCCACG...ACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACCGTGGGCATGCTCCGTaGAAAGCCGCGGACCCCAGT +
Preference number: 4 (lower is better)
Translates to: EERTDWTEGTRNCILLGYRGHAP*KAADPS
Trigger: ACTGGGGTCCGCGGCTTTGCACGGAGCATGCCCACG...GTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TGTTTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGCTTCATCATTTTGTTTaGGCCCTCAGCTTCCACCTC +
Preference number: 4 (lower is better)
Translates to: CFCHALQSDDLDGSGGGGLHHFV*ALSFHL
Trigger: GAGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAG...CCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTCCTGATTTCTTGAAATaGTTCCATCCACTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCPDFLK*FHPLGR
Trigger: GCGACCCAGTGGATGGAAGCATTTCAAGAAATCAGG...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCCTCACTGGTGATGACAGTGGGTaGAGTGCGTCCCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: ELAPSFHCHILRMKNGLTGDDSG*SASRPL
Trigger: GAGAGGACGGGACGCACTGCACCCACTGTCATCACC...AGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTGCAGTGCCTTGTAAATaGACTGCTCGTCAACTGGTT +
Preference number: 4 (lower is better)
Translates to: PSQLPRASCLAVPCKCTAAVPCK*TARQLV
Trigger: AACCAGTTGACGAGCAGTGCATTTACAAGGCACTGC...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGCATCTTGTTTGGCAGTaGCTTGTAAATGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: FCHALQSDDLDGSGGGGTHLVWQ*LVNALL
Trigger: GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATG...CGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGAGGATACAGCAGGGGTaGAGAGGATTCCATTCTGTC +
Preference number: 4 (lower is better)
Translates to: SQGHLVWQCLVNALLVNWRIQQG*RGFHSV
Trigger: GACAGAATGGAATCCTCTCCACCCCTGCTGTATCCT...CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAACGATGTACAGCCGAATaGTGGCCCCGGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: LAVPCKCTARQLVSEKVKRCTAE*WPRHSQ
Trigger: CTGGGAGTGCCGGGGCCACCATTCGGCTGTACATCG...TTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGCAAGGGCATCTTGTTTaGCAGTGCCTTGTAAATGCA +
Preference number: 4 (lower is better)
Translates to: FCHALQSDDLDGSGGGGTQGHLV*QCLVNA
Trigger: TGCATTTACAAGGCACTGCCAAACAAGATGCCCTTG...CGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp CGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTAATAGAGGGTTTGCATaGACGATCACTCTCAATGAG +
Preference number: 4 (lower is better)
Translates to: RRSSFPHSSQGHLVWQCLNRGFA*TITLNE
Trigger: CTCATTGAGAGTGATCGTCCATGCAAACCCTCTATT...AAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR TCA 90 bp TTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAACAGCGATGCGAGCGATaGGCTGGATGGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LAVPCKCTARQLVSEKVKQRCER*AGWPPS
Trigger: TGAAGGAGGCCATCCAGCTCATCGCTCGCATCGCTG...TTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR TCA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCAAGCCCTGATTTCTTaGAATGCTTCCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALQALIS*NASIHW
Trigger: CCAGTGGATGGAAGCATTTCAAGAAATCAGGGCTTG...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp GAGATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTCCCAAAATATCTGTGTaGATGGGACAATGTCGCAAA +
Preference number: 4 (lower is better)
Translates to: EIDLSPQVLFPSQLPRASPKISV*MGQCRK
Trigger: TTTGCGACATTGTCCCATTCACACAGATATTTTGGG...AGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
CDS-3UTR TCA 90 bp GAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCCTCACTCACCGACTGGCTCAGTaGGGGTGTCCAGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: ELAPSFHCHILRMKNGLTHRLAQ*GCPESS
Trigger: ACTGCTTTCTGGACACCCTCACTGAGCCAGTCGGTG...AGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR GCA 90 bp TCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGGGTCCCACAACTCCATaGATAGCATCAATACGGATC +
Preference number: 4 (lower is better)
Translates to: SQGHLVWQCLVNALLVNWGPTTP*IASIRI
Trigger: GATCCGTATTGATGCTATGCATGGAGTTGTGGGACC...CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCCTCACTCTCCACCAGGTCAGCTaGATAGGTGAGGTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ELAPSFHCHILRMKNGLTLHQVS*IGEVGV
Trigger: GACCCCAACCTCACCTATGCAGCTGACCTGGTGGAG...AGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGCAAAGAACCCATGCTTaGCCAGAATCATGTTTCGAT +
Preference number: 4 (lower is better)
Translates to: FCHALQSDDLDGSGGGGTQRTHA*PESCFD
Trigger: ATCGAAACATGATTCTGGGCAAGCATGGGTTCTTTG...CGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTCATCTTGTTTGGCAGTaGCTTGTAAATGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCHLVWQ*LVNALL
Trigger: GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATG...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGTGCACCATCATTTCATTaGCACATCCTAAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SVMLFNQMTWMGPGVEGRAPSFH*HILRMK
Trigger: CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGC...ACGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCGTATCTTCCAAGGCTaGAAGGTTAGGGCAAATGTC +
Preference number: 4 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALRIFQG*KVRANV
Trigger: GACATTTGCCCTAACCTTGCAGCCTTGGAAGATACG...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS-3UTR CCA 90 bp AAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAACTCGTGCCCGGCTTCTaGTCCTGGTACGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KEKGTCTIISLPHPKDEELVPGF*SWYAWV
Trigger: GACCCAGGCGTACCAGGACCAGAAGCCGGGCACGAG...TTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp CTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGTGAATACAGCGACCGATCCCGTTaGCGGCAGCGATGCGAGCGA +
Preference number: 4 (lower is better)
Translates to: LLVNWLVKKSNPKMLGEYSDRSR*RQRCER
Trigger: TCGCTCGCATCGCTGCCGCCAACGGGATCGGTCGCT...GTATTCACCAAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp GCTAAGGAGACAAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATAGGATACAGCAGGGGTaGAGAGGATTCCATTCTGTC +
Preference number: 4 (lower is better)
Translates to: AKETNTHAAAMQEGMKRNRIQQG*RGFHSV
Trigger: GACAGAATGGAATCCTCTCCACCCCTGCTGTATCCT...ATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTTGTCTCCTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCTCCATTGGGGCCCCCTaGGTTGTGACTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: RKELAPSFHCHILRMKNGSIGAP*VVTGCQ
Trigger: CTGACAGCCAGTCACAACCCAGGGGGCCCCAATGGA...GCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAATCCATTGGGGCCCCCTaGGTTGTGACTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SCLAVPCKCTARQLVSEKSIGAP*VVTGCQ
Trigger: CTGACAGCCAGTCACAACCCAGGGGGCCCCAATGGA...TTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGTAATGCTTCCATCCACTaGGTCGCTGTATTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: SVMLFNQMTWMGPGVEGRNASIH*VAVFKV
Trigger: AACTTTGAATACAGCGACCCAGTGGATGGAAGCATT...ACGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp CTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTCGATGTACAGCCGAATaGTGGCCCCGGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: LTQRKELIGQKALEIAFCRCTAE*WPRHSQ
Trigger: CTGGGAGTGCCGGGGCCACCATTCGGCTGTACATCG...ACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGGGCCAACATGACCTaGGGGTCCTGGTTAATCTTG +
Preference number: 4 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRGANMT*GSWLIL
Trigger: CAAGATTAACCAGGACCCCCAGGTCATGTTGGCCCC...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
CDS-3UTR CCA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTACCAGTGATGATCCCTaGCGATCTTTTAGGTCTATG +
Preference number: 4 (lower is better)
Translates to: PSQLPRASCLAVPCKCTATSDDP*RSFRSM
Trigger: CATAGACCTAAAAGATCGCCAGGGATCATCACTGGT...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR TCA 90 bp TGTTTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGTTTGCCAATGATCTTTaGGAATGTCCTCCACACTCT +
Preference number: 4 (lower is better)
Translates to: CFCHALQSDDLDGSGGGGFANDL*ECPPHS
Trigger: AGAGTGTGGAGGACATTCTCAAAGATCATTGGCAAA...CCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTAACTTTGTCATTTGCTaGGAACTGCTTCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCNFVIC*ELLPHK
Trigger: TTTGTGGGGAAGCAGTTCTCAGCAAATGACAAAGTT...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCCCAAAATATCTGTGTaGATGGGACAATGTCGCAAA +
Preference number: 4 (lower is better)
Translates to: PSQLPRASCLAVPCKCTAPKISV*MGQCRK
Trigger: TTTGCGACATTGTCCCATTCACACAGATATTTTGGG...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
CDS-3UTR GCA 90 bp ATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTAAACAGGAAACCATGGTGGCGACTTaGTGCCGGGGGTCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: IGQKALEIAFCWVTCKQETMVAT*CRGSER
Trigger: CCGCTCTGACCCCCGGCAGCAAGTCGCCACCATGGT...TTCCTGTTTACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR GCA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGGTCCCACAACTCCATaGATAGCATCAATACGGATC +
Preference number: 4 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTGPTTP*IASIRI
Trigger: GATCCGTATTGATGCTATGCATGGAGTTGTGGGACC...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAACTCCACCAGGTCAGCTaGATAGGTGAGGTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LAVPCKCTARQLVSEKVKLHQVS*IGEVGV
Trigger: GACCCCAACCTCACCTATGCAGCTGACCTGGTGGAG...TTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp AAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAACACCACTCGTGGGCATaGTCCGTGCAAAGCCGCGGA +
Preference number: 4 (lower is better)
Translates to: KEKGTCTIISLPHPKDEEHHSWA*SVQSRG
Trigger: TCCGCGGCTTTGCACGGAGCATGCCCACGAGTGGTG...TTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp AAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTCCCCGGCACTCCCAGTaGCGCTCAGTCGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: KELIGQKALEIAFCWVTCPRHSQ*RSVGRR
Trigger: TCGTCTTCCGACTGAGCGGCACTGGGAGTGCCGGGG...ACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCGTCCCGTCCTCTCCTaGAGCTGGGACACTTTCAGA +
Preference number: 4 (lower is better)
Translates to: EKGTCTIISLPHPKDEEWRPVLS*SWDTFR
Trigger: TCTGAAAGTGTCCCAGCTGCAGGAGAGGACGGGACG...CCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGGGTGATGACAGTGGGTaGAGTGCGTCCCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SHSEERTDWTEGTRNCILGDDSG*SASRPL
Trigger: GAGAGGACGGGACGCACTGCACCCACTGTCATCACC...CAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TCTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTCCATTGGGGCCCCCTaGGTTGTGACTGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SHSEERTDWTEGTRNCILSIGAP*VVTGCQ
Trigger: CTGACAGCCAGTCACAACCCAGGGGGCCCCAATGGA...CAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATTGAGATTGATCTTCCAAAATCTCCATTaGGGCCCCCTGGGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: KYPRSSNAGGHEKELRLIFQNLH*GPLGCD
Trigger: GTCACAACCCAGGGGGCCCCAATGGAGATTTTGGAA...GATCAATCTCAATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TGTTTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGATCAGTTATTGCTTCTaGAGCAGGACCTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: CFCHALQSDDLDGSGGGGISYCF*SRTSIR
Trigger: TCTAATGGAGGTCCTGCTCCAGAAGCAATAACTGAT...CCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGATCTTTCTCACGGATGTaGTCAGAACCGGTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRSFSRM*SEPVPK
Trigger: CTTCGGGACCGGTTCTGACCACATCCGTGAGAAAGA...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATTGAGATTGATCTCTTTCTCACGGATGTaGTCAGAACCGGTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: KYPRSSNAGGHEKELRLISFSRM*SEPVPK
Trigger: CTTCGGGACCGGTTCTGACCACATCCGTGAGAAAGA...GATCAATCTCAATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GAAAGATTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTTGTACAGCCGAATGGTaGCCCCGGCACTCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: ERFTKEKGTCTIISLPHPCTAEW*PRHSQC
Trigger: GCACTGGGAGTGCCGGGGCCACCATTCGGCTGTACA...AGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAATCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGAAATATCTGTGTGAATaGGACAATGTCGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: SPQVLFPSQLPRASCLAVKYLCE*DNVAKQ
Trigger: TTGTTTTGCGACATTGTCCCATTCACACAGATATTT...CACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
CDS-3UTR CCA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAATTCACTTCCACCGACTaGCTCAGTGAGGGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKFTSTD*LSEGVQ
Trigger: CTGGACACCCTCACTGAGCCAGTCGGTGGAAGTGAA...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR TCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTGTTCTTTCAGTGCACTaGAATCAAAGATGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCVLSVH*NQRCFS
Trigger: TGAGAAGCATCTTTGATTTCAGTGCACTGAAAGAAC...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp AAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATTGAGATTGATCAGATGTTGGCAGCAATaGCAGCCACAGAGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: KYPRSSNAGGHEKELRLIRCWQQ*QPQSLK
Trigger: CTTCAGACTCTGTGGCTGTCATTGCTGCCAACATCT...GATCAATCTCAATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGTTTGCCAATGATCTTTaGGAATGTCCTCCACACTCT +
Preference number: 4 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALFANDL*ECPPHS
Trigger: AGAGTGTGGAGGACATTCTCAAAGATCATTGGCAAA...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGAACTTTGTCATTTGCTaGGAACTGCTTCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALNFVIC*ELLPHK
Trigger: TTTGTGGGGAAGCAGTTCTCAGCAAATGACAAAGTT...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TGTTTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGTTCACAAAGAACCCATaGTTGCCCAGAATCATGTTT +
Preference number: 4 (lower is better)
Translates to: CFCHALQSDDLDGSGGGGFTKNP*LPRIMF
Trigger: AAACATGATTCTGGGCAAGCATGGGTTCTTTGTGAA...CCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGTAAAGAGAAAGGAACTTaGACCATCATTTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: SVMLFNQMTWMGPGVEGRKEKGT*TIISLP
Trigger: TGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT...ACGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAACGATCTTCACCATGGTaGCGACTTGCTGCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: KEKGTCTIISLPHPKDEERSSPW*RLAAGG
Trigger: ACCCCCGGCAGCAAGTCGCCACCATGGTGAAGATCG...TTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp TTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAAAGTTCTCCGCGTAGTTaGCGCTGCTCTGGAACACCT +
Preference number: 4 (lower is better)
Translates to: LAVPCKCTARQLVSEKVKSSPRS*RCSGTP
Trigger: AGGTGTTCCAGAGCAGCGCCAACTACGCGGAGAACT...TTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp AGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCAGTTCTCCGCGTAGTTaGCGCTGCTCTGGAACACCT +
Preference number: 4 (lower is better)
Translates to: RKELAPSFHCHILRMKNGSSPRS*RCSGTP
Trigger: AGGTGTTCCAGAGCAGCGCCAACTACGCGGAGAACT...GCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp GTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCATTCCAAAATCTCCATTaGGGCCCCCTGGGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: VWQCLVNALLVNWLVKKSFQNLH*GPLGCD
Trigger: GTCACAACCCAGGGGGCCCCAATGGAGATTTTGGAA...TGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAAGCTCTCCTGACTTCATaGTCTCCACCAGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LAVPCKCTARQLVSEKVKALLTS*SPPGQL
Trigger: CAGCTGACCTGGTGGAGACCATGAAGTCAGGAGAGC...TTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp CTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGTGAATACCCAGAGCACCACTCGTaGGCATGCTCCGTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LLVNWLVKKSNPKMLGEYPEHHS*ACSVQS
Trigger: GCTTTGCACGGAGCATGCCCACGAGTGGTGCTCTGG...GTATTCACCAAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCGGGGCCAACATGACCTaGGGGTCCTGGTTAATCTTG +
Preference number: 4 (lower is better)
Translates to: RKELAPSFHCHILRMKNGGANMT*GSWLIL
Trigger: CAAGATTAACCAGGACCCCCAGGTCATGTTGGCCCC...GCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
CDS-3UTR CCA 90 bp GTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGATGGGTCCGGGGGTaGAGGGACGTACCACATCAG +
Preference number: 4 (lower is better)
Translates to: VNALLVNWLVKKSNPKMLGWVRG*RDVPHQ
Trigger: CTGATGTGGTACGTCCCTCCACCCCCGGACCCATCC...AAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTGAGGAAAGAACTGATTaGACAGAAGGCACTAGAAAT +
Preference number: 4 (lower is better)
Translates to: PSQLPRASCLAVPCKCTAEERTD*TEGTRN
Trigger: ATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TGTTTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGGAGGAAAGAACTGATTaGACAGAAGGCACTAGAAAT +
Preference number: 4 (lower is better)
Translates to: CFCHALQSDDLDGSGGGGEERTD*TEGTRN
Trigger: ATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC...CCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp ATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTAAACAGGAAGGTCAGCTGCATAGGTaGGGTTGGGGTCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: IGQKALEIAFCWVTCKQEGQLHR*GWGQGG
Trigger: ACCACCCTGACCCCAACCTCACCTATGCAGCTGACC...TTCCTGTTTACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp GAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACTGCTCTTCAATCAGATaGCTTGGATGGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: EERTDWTEGTRNCILLGYCSSIR*LGWVRG
Trigger: CCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCA...GTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TCTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTGCTCTTCAATCAGATaGCTTGGATGGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SHSEERTDWTEGTRNCILCSSIR*LGWVRG
Trigger: CCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCA...CAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTAGTGTAAACTGTACCTaGTGGCTAAGGAGACAAATA +
Preference number: 4 (lower is better)
Translates to: SQLPRASCLAVPCKCTARSVNCT*WLRRQI
Trigger: TATTTGTCTCCTTAGCCATCAGGTACAGTTTACACT...ACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGACGATCACTCTCAATaGGAAAGCTTGGTTAATTCC +
Preference number: 4 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTDDHSQ*ESLVNS
Trigger: GGAATTAACCAAGCTTTCTCATTGAGAGTGATCGTC...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR GCA 90 bp AAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTCCGCGTAGTTGGCGCTaGTCTGGAACACCTTCACCC +
Preference number: 4 (lower is better)
Translates to: KELIGQKALEIAFCWVTCPRSWR*SGTPSP
Trigger: GGGTGAAGGTGTTCCAGAGCAGCGCCAACTACGCGG...ACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR GCA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGAATTTTATCAGTTATTaGTTCTGGAGCAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALNFISY*FWSRTS
Trigger: GGAGGTCCTGCTCCAGAAGCAATAACTGATAAAATT...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCAGGTCAGGGCAAACTaGATATTCTTCAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALQVRAN*IFFNCL
Trigger: AAGACAATTGAAGAATATGCAGTTTGCCCTGACCTG...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGATCCAAGTCAAACTGCTaGTTTCCCAGAACACCAAGG +
Preference number: 4 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRSKSNC*FPRTPR
Trigger: CCTTGGTGTTCTGGGAAAGCAGCAGTTTGACTTGGA...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACACTCCACCAGGTCAGCTaGATAGGTGAGGTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RKELIGQKALEIAFCWVTLHQVS*IGEVGV
Trigger: GACCCCAACCTCACCTATGCAGCTGACCTGGTGGAG...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp AAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAACTCCACCAGGTCAGCTaGATAGGTGAGGTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: KEKGTCTIISLPHPKDEELHQVS*IGEVGV
Trigger: GACCCCAACCTCACCTATGCAGCTGACCTGGTGGAG...TTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAAGCAGCCCCAAAATCATaGTCTCCTGACTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKAAPKS*SPDFMV
Trigger: GACCATGAAGTCAGGAGAGCATGATTTTGGGGCTGC...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACACCTCCACACTCTGCTTaGGGGTGGCTAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: RKELIGQKALEIAFCWVTPPHSA*GWLGWR
Trigger: TCTCCATCCTAGCCACCCGCAAGCAGAGTGTGGAGG...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGACCTGATTTCTTGAAATaGTTCCATCCACTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRPDFLK*FHPLGR
Trigger: GCGACCCAGTGGATGGAAGCATTTCAAGAAATCAGG...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAAAGATTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTCGTCCCGTCCTCTCCTaGAGCTGGGACACTTTCAGA +
Preference number: 4 (lower is better)
Translates to: ERFTKEKGTCTIISLPHPRPVLS*SWDTFR
Trigger: TCTGAAAGTGTCCCAGCTGCAGGAGAGGACGGGACG...AGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAATCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGTGAATACCGTCCCGTCCTCTCCTaGAGCTGGGACACTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LLVNWLVKKSNPKMLGEYRPVLS*SWDTFR
Trigger: TCTGAAAGTGTCCCAGCTGCAGGAGAGGACGGGACG...GTATTCACCAAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTAAACAGGAAGGTGATGACAGTGGGTaGAGTGCGTCCCGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: IGQKALEIAFCWVTCKQEGDDSG*SASRPL
Trigger: GAGAGGACGGGACGCACTGCACCCACTGTCATCACC...TTCCTGTTTACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCACCATCATTTCATTaGCACATCCTAAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTAPSFH*HILRMK
Trigger: CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGC...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTAAAGAGAAAGGAACTTaGACCATCATTTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCKEKGT*TIISLP
Trigger: TGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGTTCCAAAATCTCCATTaGGGCCCCCTGGGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: EKGTCTIISLPHPKDEEWFQNLH*GPLGCD
Trigger: GTCACAACCCAGGGGGCCCCAATGGAGATTTTGGAA...CCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTCCAGAGCACCACTCGTaGGCATGCTCCGTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: KELIGQKALEIAFCWVTCPEHHS*ACSVQS
Trigger: GCTTTGCACGGAGCATGCCCACGAGTGGTGCTCTGG...ACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAAATGACCTGGGGGTCCTaGTTAATCTTGGCAACGTCC +
Preference number: 4 (lower is better)
Translates to: LAVPCKCTARQLVSEKVKMTWGS*LILATS
Trigger: GGACGTTGCCAAGATTAACCAGGACCCCCAGGTCAT...TTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
CDS-3UTR TCA 90 bp GAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACGACAGCCACAGAGTCTaGAGGGTTCACAAAGAACCC +
Preference number: 4 (lower is better)
Translates to: EERTDWTEGTRNCILLGYDSHRV*RVHKEP
Trigger: GGGTTCTTTGTGAACCCTTCAGACTCTGTGGCTGTC...GTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAAGATGTTGGCAGCAATaGCAGCCACAGAGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SCLAVPCKCTARQLVSEKRCWQQ*QPQSLK
Trigger: CTTCAGACTCTGTGGCTGTCATTGCTGCCAACATCT...TTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGCTCTTCAATCAGATaGCTTGGATGGGTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RKELIGQKALEIAFCWVTCSSIR*LGWVRG
Trigger: CCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCA...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGAGAATATACTCTGGATaGAATTCTCCAGATAGCATG +
Preference number: 4 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALRIYSG*NSPDSM
Trigger: CATGCTATCTGGAGAATTTCATCCAGAGTATATTCT...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR GCA 90 bp GTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCATCCAAGTCAAACTGCTaGTTTCCCAGAACACCAAGG +
Preference number: 4 (lower is better)
Translates to: VWQCLVNALLVNWLVKKSSKSNC*FPRTPR
Trigger: CCTTGGTGTTCTGGGAAAGCAGCAGTTTGACTTGGA...TGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAGGTCCCACAACTCCATaGATAGCATCAATACGGATC +
Preference number: 4 (lower is better)
Translates to: VWQCLVNALLVNWLVKKSGPTTP*IASIRI
Trigger: GATCCGTATTGATGCTATGCATGGAGTTGTGGGACC...TGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCCTCACTCACAAAGGGACAGTTTaGTCGCGTCCATCAAATTCC +
Preference number: 4 (lower is better)
Translates to: ELAPSFHCHILRMKNGLTHKGTV*SRPSNS
Trigger: GGAATTTGATGGACGCGAGCAAACTGTCCCTTTGTG...AGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCCTCACTTCATTTGCTGAGAACTaGTTCCCCACAAAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: ELAPSFHCHILRMKNGLTSFAEN*FPTKER
Trigger: TCGCTCCTTTGTGGGGAAGCAGTTCTCAGCAAATGA...AGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAACCTGATTTCTTGAAATaGTTCCATCCACTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKPDFLK*FHPLGR
Trigger: GCGACCCAGTGGATGGAAGCATTTCAAGAAATCAGG...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAGCTCCAAGGAGTGCTaGATGCAGCCAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QKRKELAPSFHCHILRMKSSKEC*MQPTSA
Trigger: AGCTGAAGTTGGCTGCATGCAGCACTCCTTGGAGCT...CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR GCA 90 bp GTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAGATCCCATTGGCAGCTaGCATCTGCACTATTGTTTC +
Preference number: 4 (lower is better)
Translates to: VWQCLVNALLVNWLVKKSDPIGS*HLHYCF
Trigger: GAAACAATAGTGCAGATGGCAGCTGCCAATGGGATC...TGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR CCA 90 bp TCTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTGGTCCTGGTACGCCTaGGTCTTAACTGTCACGATC +
Preference number: 4 (lower is better)
Translates to: SHSEERTDWTEGTRNCILWSWYA*VLTVTI
Trigger: GATCGTGACAGTTAAGACCCAGGCGTACCAGGACCA...CAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CCA 90 bp TCTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGCGGACCCCAGTCTGCTaGAAATACGGAATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SHSEERTDWTEGTRNCILRTPVC*KYGMLK
Trigger: CTTCAGCATTCCGTATTTCCAGCAGACTGGGGTCCG...CAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp CTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTCGGACCCCAGTCTGCTaGAAATACGGAATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LTQRKELIGQKALEIAFCRTPVC*KYGMLK
Trigger: CTTCAGCATTCCGTATTTCCAGCAGACTGGGGTCCG...ACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp CTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTTCAATCAGATGACTTaGATGGGTCCGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LTQRKELIGQKALEIAFCFNQMT*MGPGVE
Trigger: CTCCACCCCCGGACCCATCCAAGTCATCTGATTGAA...ACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCACTGCTCGTCAACTaGTTAGTGAAAAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTALLVN*LVKKSN
Trigger: ATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGC...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAAAAATCATGCTCTCCTaGCTTCATGGTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: SCLAVPCKCTARQLVSEKKIMLS*LHGLHQ
Trigger: CTGGTGGAGACCATGAAGTCAGGAGAGCATGATTTT...TTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGA
44% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp AGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCCAAGCCCTGATTTCTTaGAATGCTTCCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: RKELAPSFHCHILRMKNGQALIS*NASIHW
Trigger: CCAGTGGATGGAAGCATTTCAAGAAATCAGGGCTTG...GCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAACAAGCCCTGATTTCTTaGAATGCTTCCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: SCLAVPCKCTARQLVSEKQALIS*NASIHW
Trigger: CCAGTGGATGGAAGCATTTCAAGAAATCAGGGCTTG...TTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp CAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTATGAGGCGCAAGCCCTaGTTTCTTGAAATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QCLVNALLVNWLVKKSNPMRRKP*FLEMLP
Trigger: TGGAAGCATTTCAAGAAATCAGGGCTTGCGCCTCAT...AGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp AAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAAGGCCTCACTCACTGCTaGTGCTCCACCTATAGCTTA +
Preference number: 4 (lower is better)
Translates to: KEKGTCTIISLPHPKDEEGLTHC*CSTYSL
Trigger: TAAGCTATAGGTGGAGCATCAGCAGTGAGTGAGGCC...TTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAAGGTCCCACAACTCCATaGATAGCATCAATACGGATC +
Preference number: 4 (lower is better)
Translates to: LAVPCKCTARQLVSEKVKGPTTP*IASIRI
Trigger: GATCCGTATTGATGCTATGCATGGAGTTGTGGGACC...TTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGGCAGCCCCAAAATCATaGTCTCCTGACTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: QKRKELAPSFHCHILRMKAAPKS*SPDFMV
Trigger: GACCATGAAGTCAGGAGAGCATGATTTTGGGGCTGC...CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGGCAGCCCCAAAATCATaGTCTCCTGACTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: SHSEERTDWTEGTRNCILAAPKS*SPDFMV
Trigger: GACCATGAAGTCAGGAGAGCATGATTTTGGGGCTGC...CAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCACAAAGGGACAGTTTaGTCGCGTCCATCAAATTCC +
Preference number: 4 (lower is better)
Translates to: EKGTCTIISLPHPKDEEWHKGTV*SRPSNS
Trigger: GGAATTTGATGGACGCGAGCAAACTGTCCCTTTGTG...CCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAACCTGATTTCTTGAAATaGTTCCATCCACTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: SCLAVPCKCTARQLVSEKPDFLK*FHPLGR
Trigger: GCGACCCAGTGGATGGAAGCATTTCAAGAAATCAGG...TTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGCAGTGCCTTGTAAATaGACTGCTCGTCAACTGGTT +
Preference number: 4 (lower is better)
Translates to: SCLAVPCKCTARQLVSEKAVPCK*TARQLV
Trigger: AACCAGTTGACGAGCAGTGCATTTACAAGGCACTGC...TTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGCACCATCATTTCATTaGCACATCCTAAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRAPSFH*HILRMK
Trigger: CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGC...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTAAAGAGAAAGGAACTTaGACCATCATTTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTKEKGT*TIISLP
Trigger: TGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp CTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTAGGATACAGCAGGGGTaGAGAGGATTCCATTCTGTC +
Preference number: 4 (lower is better)
Translates to: LTQRKELIGQKALEIAFCRIQQG*RGFHSV
Trigger: GACAGAATGGAATCCTCTCCACCCCTGCTGTATCCT...ACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTGCTCTCCTGACTTCATaGTCTCCACCAGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: KELIGQKALEIAFCWVTCALLTS*SPPGQL
Trigger: CAGCTGACCTGGTGGAGACCATGAAGTCAGGAGAGC...ACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp CTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGTGAATACATGACCTGGGGGTCCTaGTTAATCTTGGCAACGTCC +
Preference number: 4 (lower is better)
Translates to: LLVNWLVKKSNPKMLGEYMTWGS*LILATS
Trigger: GGACGTTGCCAAGATTAACCAGGACCCCCAGGTCAT...GTATTCACCAAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
CDS-3UTR CCA 90 bp TTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATTTCAATCAGATGACTTaGATGGGTCCGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FTKEKGTCTIISLPHPKDFNQMT*MGPGVE
Trigger: CTCCACCCCCGGACCCATCCAAGTCATCTGATTGAA...ATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp GAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACAAAATCATGCTCTCCTaGCTTCATGGTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: EERTDWTEGTRNCILLGYKIMLS*LHGLHQ
Trigger: CTGGTGGAGACCATGAAGTCAGGAGAGCATGATTTT...GTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp GTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGACAGCCACAGAGTCTaGAGGGTTCACAAAGAACCC +
Preference number: 4 (lower is better)
Translates to: VNALLVNWLVKKSNPKMLDSHRV*RVHKEP
Trigger: GGGTTCTTTGTGAACCCTTCAGACTCTGTGGCTGTC...AAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAATTTGCCAATGATCTTTaGGAATGTCCTCCACACTCT +
Preference number: 4 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKFANDL*ECPPHS
Trigger: AGAGTGTGGAGGACATTCTCAAAGATCATTGGCAAA...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp GAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACCAAGCCCTGATTTCTTaGAATGCTTCCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: EERTDWTEGTRNCILLGYQALIS*NASIHW
Trigger: CCAGTGGATGGAAGCATTTCAAGAAATCAGGGCTTG...GTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAAGTGTAAACTGTACCTaGTGGCTAAGGAGACAAATA +
Preference number: 4 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRSVNCT*WLRRQI
Trigger: TATTTGTCTCCTTAGCCATCAGGTACAGTTTACACT...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp GTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGCCTCACTCACTGCTaGTGCTCCACCTATAGCTTA +
Preference number: 4 (lower is better)
Translates to: VNALLVNWLVKKSNPKMLGLTHC*CSTYSL
Trigger: TAAGCTATAGGTGGAGCATCAGCAGTGAGTGAGGCC...AAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTCCAAGTCAAACTGCTaGTTTCCCAGAACACCAAGG +
Preference number: 4 (lower is better)
Translates to: SHSEERTDWTEGTRNCILSKSNC*FPRTPR
Trigger: CCTTGGTGTTCTGGGAAAGCAGCAGTTTGACTTGGA...CAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAAAGATTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTGCAGCCCCAAAATCATaGTCTCCTGACTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: ERFTKEKGTCTIISLPHPAAPKS*SPDFMV
Trigger: GACCATGAAGTCAGGAGAGCATGATTTTGGGGCTGC...AGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAATCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTCACAAAGGGACAGTTTaGTCGCGTCCATCAAATTCC +
Preference number: 4 (lower is better)
Translates to: LTQRKELIGQKALEIAFCHKGTV*SRPSNS
Trigger: GGAATTTGATGGACGCGAGCAAACTGTCCCTTTGTG...ACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TCTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGCTTCATCATTTTGTTTaGGCCCTCAGCTTCCACCTC +
Preference number: 4 (lower is better)
Translates to: SHSEERTDWTEGTRNCILLHHFV*ALSFHL
Trigger: GAGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAG...CAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCATCTTGTTTGGCAGTaGCTTGTAAATGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: EKGTCTIISLPHPKDEEWHLVWQ*LVNALL
Trigger: GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATG...CCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAAGCACCATCATTTCATTaGCACATCCTAAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKAPSFH*HILRMK
Trigger: CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGC...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTAAACAGGAAGCGACCGATCTTTCCTaGTTAAGGCGACAGCACTCT +
Preference number: 4 (lower is better)
Translates to: IGQKALEIAFCWVTCKQEATDLS*LRRQHS
Trigger: AGAGTGCTGTCGCCTTAAGCAGGAAAGATCGGTCGC...TTCCTGTTTACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS-3UTR CCA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAAAATGCTTCCATCCACTaGGTCGCTGTATTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKNASIH*VAVFKV
Trigger: AACTTTGAATACAGCGACCCAGTGGATGGAAGCATT...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATGCTTCCATCCACTaGGTCGCTGTATTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: VWQCLVNALLVNWLVKKSNASIH*VAVFKV
Trigger: AACTTTGAATACAGCGACCCAGTGGATGGAAGCATT...TGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTTTCAATCAGATGACTTaGATGGGTCCGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VNALLVNWLVKKSNPKMLFNQMT*MGPGVE
Trigger: CTCCACCCCCGGACCCATCCAAGTCATCTGATTGAA...AAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGCACTGCTCGTCAACTaGTTAGTGAAAAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRALLVN*LVKKSN
Trigger: ATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGC...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCAAGGGCATCTTGTTTaGCAGTGCCTTGTAAATGCA +
Preference number: 4 (lower is better)
Translates to: EKGTCTIISLPHPKDEEWQGHLV*QCLVNA
Trigger: TGCATTTACAAGGCACTGCCAAACAAGATGCCCTTG...CCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCCAAGGGCATCTTGTTTaGCAGTGCCTTGTAAATGCA +
Preference number: 4 (lower is better)
Translates to: RKELAPSFHCHILRMKNGQGHLV*QCLVNA
Trigger: TGCATTTACAAGGCACTGCCAAACAAGATGCCCTTG...GCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp GAAAGATTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAAATCATGCTCTCCTaGCTTCATGGTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: ERFTKEKGTCTIISLPHPKIMLS*LHGLHQ
Trigger: CTGGTGGAGACCATGAAGTCAGGAGAGCATGATTTT...AGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAATCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAAAGTGTAAACTGTACCTaGTGGCTAAGGAGACAAATA +
Preference number: 4 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKSVNCT*WLRRQI
Trigger: TATTTGTCTCCTTAGCCATCAGGTACAGTTTACACT...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCCTCACTAATTTTATCAGTTATTaGTTCTGGAGCAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: ELAPSFHCHILRMKNGLTNFISY*FWSRTS
Trigger: GGAGGTCCTGCTCCAGAAGCAATAACTGATAAAATT...AGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGTGAATACTCCAAGTCAAACTGCTaGTTTCCCAGAACACCAAGG +
Preference number: 4 (lower is better)
Translates to: LLVNWLVKKSNPKMLGEYSKSNC*FPRTPR
Trigger: CCTTGGTGTTCTGGGAAAGCAGCAGTTTGACTTGGA...GTATTCACCAAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCAAAGAACCCATGCTTaGCCAGAATCATGTTTCGAT +
Preference number: 4 (lower is better)
Translates to: EKGTCTIISLPHPKDEEWQRTHA*PESCFD
Trigger: ATCGAAACATGATTCTGGGCAAGCATGGGTTCTTTG...CCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGTGAATACCTTCATCATTTTGTTTaGGCCCTCAGCTTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LLVNWLVKKSNPKMLGEYLHHFV*ALSFHL
Trigger: GAGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAG...GTATTCACCAAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATTCATTTGCTGAGAACTaGTTCCCCACAAAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: FTKEKGTCTIISLPHPKDSFAEN*FPTKER
Trigger: TCGCTCCTTTGTGGGGAAGCAGTTCTCAGCAAATGA...ATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp TTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGCAGTGCCTTGTAAATaGACTGCTCGTCAACTGGTT +
Preference number: 4 (lower is better)
Translates to: FTKEKGTCTIISLPHPKDAVPCK*TARQLV
Trigger: AACCAGTTGACGAGCAGTGCATTTACAAGGCACTGC...ATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp AAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAAGCAGTGCCTTGTAAATaGACTGCTCGTCAACTGGTT +
Preference number: 4 (lower is better)
Translates to: KEKGTCTIISLPHPKDEEAVPCK*TARQLV
Trigger: AACCAGTTGACGAGCAGTGCATTTACAAGGCACTGC...TTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGATCAGTTATTGCTTCTaGAGCAGGACCTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: EKGTCTIISLPHPKDEEWISYCF*SRTSIR
Trigger: TCTAATGGAGGTCCTGCTCCAGAAGCAATAACTGAT...CCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
3UTR CAA 72 bp TTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATaGCCACATCCTAAGGATGAAGAATGGCCTCACTCA +
Preference number: 4 (lower is better)
Translates to: FTKEKGTCTIIS*PHPKDEEWPHS
Trigger: TGAGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp CAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTGTTCTTTCAGTGCACTaGAATCAAAGATGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QCLVNALLVNWLVKKSNPVLSVH*NQRCFS
Trigger: TGAGAAGCATCTTTGATTTCAGTGCACTGAAAGAAC...AGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp GTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTATGAGGCGCAAGCCCTaGTTTCTTGAAATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VNALLVNWLVKKSNPKMLMRRKP*FLEMLP
Trigger: TGGAAGCATTTCAAGAAATCAGGGCTTGCGCCTCAT...AAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp CTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTCAAAGAACCCATGCTTaGCCAGAATCATGTTTCGAT +
Preference number: 4 (lower is better)
Translates to: LTQRKELIGQKALEIAFCQRTHA*PESCFD
Trigger: ATCGAAACATGATTCTGGGCAAGCATGGGTTCTTTG...ACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp GAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGTTCACAAAGAACCCATaGTTGCCCAGAATCATGTTT +
Preference number: 4 (lower is better)
Translates to: EKGTCTIISLPHPKDEEWFTKNP*LPRIMF
Trigger: AAACATGATTCTGGGCAAGCATGGGTTCTTTGTGAA...CCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp AAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTCACAAAGGGACAGTTTaGTCGCGTCCATCAAATTCC +
Preference number: 4 (lower is better)
Translates to: KELIGQKALEIAFCWVTCHKGTV*SRPSNS
Trigger: GGAATTTGATGGACGCGAGCAAACTGTCCCTTTGTG...ACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp CAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGGTTCTTTCAGTGCACTaGAATCAAAGATGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QKRKELAPSFHCHILRMKVLSVH*NQRCFS
Trigger: TGAGAAGCATCTTTGATTTCAGTGCACTGAAAGAAC...CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACAAACTTTGTCATTTGCTaGGAACTGCTTCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: RKELIGQKALEIAFCWVTNFVIC*ELLPHK
Trigger: TTTGTGGGGAAGCAGTTCTCAGCAAATGACAAAGTT...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp TTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATAACTTTGTCATTTGCTaGGAACTGCTTCCCCACAAA +
Preference number: 4 (lower is better)
Translates to: FTKEKGTCTIISLPHPKDNFVIC*ELLPHK
Trigger: TTTGTGGGGAAGCAGTTCTCAGCAAATGACAAAGTT...ATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp CAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAGTGTAAACTGTACCTaGTGGCTAAGGAGACAAATA +
Preference number: 4 (lower is better)
Translates to: QKRKELAPSFHCHILRMKSVNCT*WLRRQI
Trigger: TATTTGTCTCCTTAGCCATCAGGTACAGTTTACACT...CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR TCA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACACCCAAAATATCTGTGTaGATGGGACAATGTCGCAAA +
Preference number: 4 (lower is better)
Translates to: RKELIGQKALEIAFCWVTPKISV*MGQCRK
Trigger: TTTGCGACATTGTCCCATTCACACAGATATTTTGGG...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
CDS-3UTR GCA 90 bp GAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACCAGGTCAGGGCAAACTaGATATTCTTCAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: EERTDWTEGTRNCILLGYQVRAN*IFFNCL
Trigger: AAGACAATTGAAGAATATGCAGTTTGCCCTGACCTG...GTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTAAACAGGAACATCTTGTTTGGCAGTaGCTTGTAAATGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: IGQKALEIAFCWVTCKQEHLVWQ*LVNALL
Trigger: GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATG...TTCCTGTTTACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp AAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATTGGCAGCTGCCATCTaGACTATTGTTTCTATTGCT +
Preference number: 4 (lower is better)
Translates to: KEKGTCTIISLPHPKDEELAAAI*TIVSIA
Trigger: AGCAATAGAAACAATAGTGCAGATGGCAGCTGCCAA...TTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR CCA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACAATCAGTTATTGCTTCTaGAGCAGGACCTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: RKELIGQKALEIAFCWVTISYCF*SRTSIR
Trigger: TCTAATGGAGGTCCTGCTCCAGAAGCAATAACTGAT...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GAAAGATTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTATCAGTTATTGCTTCTaGAGCAGGACCTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: ERFTKEKGTCTIISLPHPISYCF*SRTSIR
Trigger: TCTAATGGAGGTCCTGCTCCAGAAGCAATAACTGAT...AGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAATCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp CTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTGCACTGCTCGTCAACTaGTTAGTGAAAAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: LTQRKELIGQKALEIAFCALLVN*LVKKSN
Trigger: ATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGC...ACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAAAAATATCTGTGTGAATaGGACAATGTCGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKKYLCE*DNVAKQ
Trigger: TTGTTTTGCGACATTGTCCCATTCACACAGATATTT...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
CDS-3UTR GCA 90 bp TTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATAATTTTATCAGTTATTaGTTCTGGAGCAGGACCTCC +
Preference number: 4 (lower is better)
Translates to: FTKEKGTCTIISLPHPKDNFISY*FWSRTS
Trigger: GGAGGTCCTGCTCCAGAAGCAATAACTGATAAAATT...ATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp AAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAACAGGTCAGGGCAAACTaGATATTCTTCAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: KEKGTCTIISLPHPKDEEQVRAN*IFFNCL
Trigger: AAGACAATTGAAGAATATGCAGTTTGCCCTGACCTG...TTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp ATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTAAACAGGAACAAAGAACCCATGCTTaGCCAGAATCATGTTTCGAT +
Preference number: 4 (lower is better)
Translates to: IGQKALEIAFCWVTCKQEQRTHA*PESCFD
Trigger: ATCGAAACATGATTCTGGGCAAGCATGGGTTCTTTG...TTCCTGTTTACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR GCA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATTCACAAAGAACCCATaGTTGCCCAGAATCATGTTT +
Preference number: 4 (lower is better)
Translates to: RKELIGQKALEIAFCWVTFTKNP*LPRIMF
Trigger: AAACATGATTCTGGGCAAGCATGGGTTCTTTGTGAA...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTAATGCTTCCATCCACTaGGTCGCTGTATTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: KELIGQKALEIAFCWVTCNASIH*VAVFKV
Trigger: AACTTTGAATACAGCGACCCAGTGGATGGAAGCATT...ACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp GAAAGATTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTGAGGAAAGAACTGATTaGACAGAAGGCACTAGAAAT +
Preference number: 4 (lower is better)
Translates to: ERFTKEKGTCTIISLPHPEERTD*TEGTRN
Trigger: ATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC...AGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAATCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp TTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAACTCAATGAGAAAGCTTaGTTAATTCCTTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LAVPCKCTARQLVSEKVKLNEKA*LIPCCC
Trigger: ACAACAACAAGGAATTAACCAAGCTTTCTCATTGAG...TTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR TCA 90 bp AAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTTGCAACAGTGTCGTATaGGTAACTAAAATAGAGGGT +
Preference number: 4 (lower is better)
Translates to: KELIGQKALEIAFCWVTCCNSVV*VTKIEG
Trigger: ACCCTCTATTTTAGTTACTCATACGACACTGTTGCA...ACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR GCA 90 bp GTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTCAGGTCAGGGCAAACTaGATATTCTTCAATTGTCTT +
Preference number: 4 (lower is better)
Translates to: VNALLVNWLVKKSNPKMLQVRAN*IFFNCL
Trigger: AAGACAATTGAAGAATATGCAGTTTGCCCTGACCTG...AAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp AAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTGAGGAAAGAACTGATTaGACAGAAGGCACTAGAAAT +
Preference number: 4 (lower is better)
Translates to: KELIGQKALEIAFCWVTCEERTD*TEGTRN
Trigger: ATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC...ACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CCA 90 bp CAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAAATATCTGTGTGAATaGGACAATGTCGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: QKRKELAPSFHCHILRMKKYLCE*DNVAKQ
Trigger: TTGTTTTGCGACATTGTCCCATTCACACAGATATTT...CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
CDS-3UTR GCA 90 bp GTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTAAAGAGAAAGGAACTTaGACCATCATTTCATTGCCA +
Preference number: 4 (lower is better)
Translates to: VNALLVNWLVKKSNPKMLKEKGT*TIISLP
Trigger: TGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT...AAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS GCA 90 bp CCGCGCCCGCACCTCCCGGCGCCCCGGGAGTCAGGCGAGCAGGTCTaGCGGGTCCCGTGGCCACTTTCCCCAGCCCGGCGACCTCCGTCG +
Preference number: 5 (lower is better)
Translates to: PRPHLPAPRESGEQV*RVPWPLSPARRPPS
Trigger: CGACGGAGGTCGCCGGGCTGGGGAAAGTGGCCACGGGACCCGGCAGACCTGCTCGCCTGACTCCCGGGGCGCCGGGAGGTGCGGGCGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS CCA 90 bp CTCCCGGCGCCCCGGGAGTCAGGCGAGCAGGTCTGCCGGGTCCCGTaGCCACTTTCCCCAGCCCGGCGACCTCCGTCGGGCCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: LPAPRESGEQVCRVP*PLSPARRPPSGLQA
Trigger: GGCCTGGAGGCCCGACGGAGGTCGCCGGGCTGGGGAAAGTGGCCACGGGACCCGGCAGACCTGCTCGCCTGACTCCCGGGGCGCCGGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS GCA 90 bp GCCTGGGTCTTAACTGTCACGATCTTCACCATGGTGGCGACTTGCTaGCGGGGGTCAGAGCGGCGGACTTGGCTGGCGGAGGGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: AWVLTVTIFTMVATC*RGSERRTWLAEGRP
Trigger: CGGCCGCCCCTCCGCCAGCCAAGTCCGCCGCTCTGACCCCCGGCAGCAAGTCGCCACCATGGTGAAGATCGTGACAGTTAAGACCCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS GCA 90 bp TACGCCTGGGTCTTAACTGTCACGATCTTCACCATGGTGGCGACTTaGTGCCGGGGGTCAGAGCGGCGGACTTGGCTGGCGGAGGGGCGG +
Preference number: 5 (lower is better)
Translates to: YAWVLTVTIFTMVAT*CRGSERRTWLAEGR
Trigger: CCGCCCCTCCGCCAGCCAAGTCCGCCGCTCTGACCCCCGGCAGCAAGTCGCCACCATGGTGAAGATCGTGACAGTTAAGACCCAGGCGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS CCA 90 bp CGCTTCCGCAGCCCGCTCGTGCCCGGCTTCTGGTCCTGGTACGCCTaGGTCTTAACTGTCACGATCTTCACCATGGTGGCGACTTGCTGC +
Preference number: 5 (lower is better)
Translates to: RFRSPLVPGFWSWYA*VLTVTIFTMVATCC
Trigger: GCAGCAAGTCGCCACCATGGTGAAGATCGTGACAGTTAAGACCCAGGCGTACCAGGACCAGAAGCCGGGCACGAGCGGGCTGCGGAAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS CCA 90 bp ACCTTCACCCGCTTCCGCAGCCCGCTCGTGCCCGGCTTCTGGTCCTaGTACGCCTGGGTCTTAACTGTCACGATCTTCACCATGGTGGCG +
Preference number: 5 (lower is better)
Translates to: TFTRFRSPLVPGFWS*YAWVLTVTIFTMVA
Trigger: CGCCACCATGGTGAAGATCGTGACAGTTAAGACCCAGGCGTACCAGGACCAGAAGCCGGGCACGAGCGGGCTGCGGAAGCGGGTGAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CAA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTGTCAGAGCGGCGGACTaGGCTGGCGGAGGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PSQLPRASCLAVPCKCTAVRAAD*AGGGAA
Trigger: GGCCGCCCCTCCGCCAGCCAAGTCCGCCGCTCTGAC...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS CCA 90 bp TGGAACACCTTCACCCGCTTCCGCAGCCCGCTCGTGCCCGGCTTCTaGTCCTGGTACGCCTGGGTCTTAACTGTCACGATCTTCACCATG +
Preference number: 5 (lower is better)
Translates to: WNTFTRFRSPLVPGF*SWYAWVLTVTIFTM
Trigger: CATGGTGAAGATCGTGACAGTTAAGACCCAGGCGTACCAGGACCAGAAGCCGGGCACGAGCGGGCTGCGGAAGCGGGTGAAGGTGTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CAA 90 bp TGTTTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGAAGCGACCGATCCCGTaGGCGGCAGCGATGCGAGCG +
Preference number: 5 (lower is better)
Translates to: CFCHALQSDDLDGSGGGGKRPIP*AAAMRA
Trigger: CGCTCGCATCGCTGCCGCCAACGGGATCGGTCGCTT...CCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS CCA 90 bp TCTTGGCAACGTCCTTCTCATAGCTATCGATGTACAGCCGAATGGTaGCCCCGGCACTCCCAGTGCCGCTCAGTCGGAAGACGATTCGAG +
Preference number: 5 (lower is better)
Translates to: SWQRPSHSYRCTAEW*PRHSQCRSVGRRFE
Trigger: CTCGAATCGTCTTCCGACTGAGCGGCACTGGGAGTGCCGGGGCCACCATTCGGCTGTACATCGATAGCTATGAGAAGGACGTTGCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGAGTCGGGCGTGACCTaGGGAGGCTCCGCGCCCGCA +
Preference number: 5 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRESGVT*GGSAPA
Trigger: TGCGGGCGCGGAGCCTCCCAAGGTCACGCCCGACTC...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS-3UTR CAA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTTCCTCCACACTCTGCTaGCGGGTGGCTAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: PSQLPRASCLAVPCKCTASSTLC*RVARME
Trigger: CTCCATCCTAGCCACCCGCAAGCAGAGTGTGGAGGA...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCACAAAGGGACAGTTaGCTCGCGTCCATCAAATTC +
Preference number: 5 (lower is better)
Translates to: SPQVLFPSQLPRASCLAVPQRDS*LASIKF
Trigger: GAATTTGATGGACGCGAGCAAACTGTCCCTTTGTGG...CACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS TCA 90 bp CAGCTTCCACCTCCTCGTAATCATACCTGGAAGAAGTCACGAAGTTaGGGCCCACGGGCTGACTGCAGATCACACCAAGGCCTATCAGTC +
Preference number: 5 (lower is better)
Translates to: QLPPPRNHTWKKSRS*GPRADCRSHQGLSV
Trigger: GACTGATAGGCCTTGGTGTGATCTGCAGTCAGCCCGTGGGCCTCAACTTCGTGACTTCTTCCAGGTATGATTACGAGGAGGTGGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483707.1
CDS-3UTR CAA 90 bp TTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGTCAGAGCGGCGGACTaGGCTGGCGGAGGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: FTKEKGTCTIISLPHPKDVRAAD*AGGGAA
Trigger: GGCCGCCCCTCCGCCAGCCAAGTCCGCCGCTCTGAC...ATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CAA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAACACCATGGTGGCGACTaGCTGCCGGGGGTCAGAGCG +
Preference number: 5 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKHHGGD*LPGVRA
Trigger: CGCTCTGACCCCCGGCAGCAAGTCGCCACCATGGTG...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CAA 90 bp CGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTCCTTCATCATTTTGTTaGCGCCCTCAGCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: RRSSFPHSSQGHLVWQCLPSSFC*RPQLPP
Trigger: AGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAGG...AAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGAAGTCCTTCATCATTTaGTTTGCGCCCTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SPQVLFPSQLPRASCLAVKSFII*FAPSAS
Trigger: GGAAGCTGAGGGCGCAAACAAAATGATGAAGGACTT...CACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCTTCAATCAGATGACTaGGATGGGTCCGGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: PSQLPRASCLAVPCKCTALQSDD*DGSGGG
Trigger: TCCACCCCCGGACCCATCCAAGTCATCTGATTGAAG...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGGGAATGCTGAAGATGTaGGCAGCAATGACAGCCACA +
Preference number: 5 (lower is better)
Translates to: FCHALQSDDLDGSGGGGTGMLKM*AAMTAT
Trigger: TGTGGCTGTCATTGCTGCCAACATCTTCAGCATTCC...CGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGCCACAAAGGGACAGTTaGCTCGCGTCCATCAAATTC +
Preference number: 5 (lower is better)
Translates to: FCHALQSDDLDGSGGGGTPQRDS*LASIKF
Trigger: GAATTTGATGGACGCGAGCAAACTGTCCCTTTGTGG...CGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TCTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGCACCATGGTGGCGACTaGCTGCCGGGGGTCAGAGCG +
Preference number: 5 (lower is better)
Translates to: SHSEERTDWTEGTRNCILHHGGD*LPGVRA
Trigger: CGCTCTGACCCCCGGCAGCAAGTCGCCACCATGGTG...CAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS-3UTR CAA 90 bp GAGATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTGGATCTTCAGTCGGTTaGGCCCAGAAAGTAGTTCTT +
Preference number: 5 (lower is better)
Translates to: EIDLSPQVLFPSQLPRASGSSVG*AQKVVL
Trigger: AAGAACTACTTTCTGGGCCAAACCGACTGAAGATCC...AGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp CCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGGAATGCTGAAGATGTaGGCAGCAATGACAGCCACA +
Preference number: 5 (lower is better)
Translates to: PHSSQGHLVWQCLVNALLGMLKM*AAMTAT
Trigger: TGTGGCTGTCATTGCTGCCAACATCTTCAGCATTCC...GAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGTGTAAACTTTGTCATTaGCTGAGAACTGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: SPQVLFPSQLPRASCLAVCKLCH*LRTASP
Trigger: TGGGGAAGCAGTTCTCAGCAAATGACAAAGTTTACA...CACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTCCAAGGGCATCTTGTTaGGCAGTGCCTTGTAAATGC +
Preference number: 5 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCPRASC*AVPCKC
Trigger: GCATTTACAAGGCACTGCCAAACAAGATGCCCTTGG...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGTACAAAGAACCCATGCTaGCCCAGAATCATGTTTCGA +
Preference number: 5 (lower is better)
Translates to: SVMLFNQMTWMGPGVEGRTKNPC*PRIMFR
Trigger: TCGAAACATGATTCTGGGCAAGCATGGGTTCTTTGT...ACGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGGGAATGCTGAAGATGTaGGCAGCAATGACAGCCACA +
Preference number: 5 (lower is better)
Translates to: SQGHLVWQCLVNALLVNWGMLKM*AAMTAT
Trigger: TGTGGCTGTCATTGCTGCCAACATCTTCAGCATTCC...CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TGTTTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGAAGTCCTTCATCATTTaGTTTGCGCCCTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: CFCHALQSDDLDGSGGGGKSFII*FAPSAS
Trigger: GGAAGCTGAGGGCGCAAACAAAATGATGAAGGACTT...CCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TGTTTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGGCAAGCCCTGATTTCTaGAAATGCTTCCATCCACTG +
Preference number: 5 (lower is better)
Translates to: CFCHALQSDDLDGSGGGGASPDF*KCFHPL
Trigger: CAGTGGATGGAAGCATTTCAAGAAATCAGGGCTTGC...CCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCCAAGGGCATCTTGTTaGGCAGTGCCTTGTAAATGC +
Preference number: 5 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALPRASC*AVPCKC
Trigger: GCATTTACAAGGCACTGCCAAACAAGATGCCCTTGG...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS GCA 90 bp GGAGCGATCAAACATCAGGGCCTCCAAGTCCTTCATCATTTTGTTTaGGCCCTCAGCTTCCACCTCCTCGTAATCATACCTGGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: GAIKHQGLQVLHHFV*ALSFHLLVIIPGEE
Trigger: TTCTTCACCAGGTATGATTACGAGGAGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAGGACTTGGAGGCCCTGATGTTTGATCGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS GCA 90 bp CCCAAAAGATTGTATGCTCCTTTCCTGCTTAAGGCGACAGCACTCTaGGCCGTAATCGTATCTTCCAAGGCTGCAAGGTTAGGGCAAATG +
Preference number: 5 (lower is better)
Translates to: PKRLYAPFLLKATAL*AVIVSSKAARLGQM
Trigger: CATTTGCCCTAACCTTGCAGCCTTGGAAGATACGATTACGGCGCAGAGTGCTGTCGCCTTAAGCAGGAAAGGAGCATACAATCTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473117.2
CDS GCA 90 bp GGAGCGATCAAACATCAGGGCCTCCAAGTCCTTCATCATTTTGTTTaGGCCCTCAGCTTCCACCTCCTCGTAATCATACCTGGAAGAAGT +
Preference number: 5 (lower is better)
Translates to: GAIKHQGLQVLHHFV*ALSFHLLVIIPGRS
Trigger: ACTTCTTCCAGGTATGATTACGAGGAGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAGGACTTGGAGGCCCTGATGTTTGATCGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483707.1
CDS-3UTR CAA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTACAAAGAACCCATGCTaGCCCAGAATCATGTTTCGA +
Preference number: 5 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCTKNPC*PRIMFR
Trigger: TCGAAACATGATTCTGGGCAAGCATGGGTTCTTTGT...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCTCCTCCACACTCTGCTaGCGGGTGGCTAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: RKELAPSFHCHILRMKNGSSTLC*RVARME
Trigger: CTCCATCCTAGCCACCCGCAAGCAGAGTGTGGAGGA...GCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAATCCTCCACACTCTGCTaGCGGGTGGCTAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: SCLAVPCKCTARQLVSEKSSTLC*RVARME
Trigger: CTCCATCCTAGCCACCCGCAAGCAGAGTGTGGAGGA...TTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGACGTGTAAACTTTGTCATTaGCTGAGAACTGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: FCHALQSDDLDGSGGGGTCKLCH*LRTASP
Trigger: TGGGGAAGCAGTTCTCAGCAAATGACAAAGTTTACA...CGTCCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTCCAAGGGCATCTTGTTaGGCAGTGCCTTGTAAATGC +
Preference number: 5 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTPRASC*AVPCKC
Trigger: GCATTTACAAGGCACTGCCAAACAAGATGCCCTTGG...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GCTAAGGAGACAAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATGGATCTTCAGTCGGTTaGGCCCAGAAAGTAGTTCTT +
Preference number: 5 (lower is better)
Translates to: AKETNTHAAAMQEGMKRNGSSVG*AQKVVL
Trigger: AAGAACTACTTTCTGGGCCAAACCGACTGAAGATCC...ATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTTGTCTCCTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGACAAAGAACCCATGCTaGCCCAGAATCATGTTTCGA +
Preference number: 5 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALTKNPC*PRIMFR
Trigger: TCGAAACATGATTCTGGGCAAGCATGGGTTCTTTGT...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGAAAACTTCCAGCCAGTaGGGGTCTCATACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: SQGHLVWQCLVNALLVNWKTSSQ*GSHTKQ
Trigger: TTGCTTTGTATGAGACCCCAACTGGCTGGAAGTTTT...CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TGTTTCTGTCATGCTCTTCAATCAGATGACTTGGATGGGTCCGGGGGTGGAGGGTGTAAACTTTGTCATTaGCTGAGAACTGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: CFCHALQSDDLDGSGGGGCKLCH*LRTASP
Trigger: TGGGGAAGCAGTTCTCAGCAAATGACAAAGTTTACA...CCCTCCACCCCCGGACCCATCCAAGTCATCTGATTGAAGAGCATGACAGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCCTCACTCTTCAATCAGATGACTaGGATGGGTCCGGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: ELAPSFHCHILRMKNGLTLQSDD*DGSGGG
Trigger: TCCACCCCCGGACCCATCCAAGTCATCTGATTGAAG...AGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGGTCTTCAAAGTTGTTTaGATGAGGACACTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALVFKVV*MRTLLP
Trigger: GGGCAGAAGTGTCCTCATCAAAACAACTTTGAAGAC...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR CAA 90 bp CCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTTCCACTGTGAAGGGTTaGAACTTATTTTCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: PSQLPRASCLAVPCKCTASTVKG*NLFSKS
Trigger: TGACTTGGAAAATAAGTTCAAACCCTTCACAGTGGA...AGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATCCTCCACACTCTGCTaGCGGGTGGCTAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: KEKGTCTIISLPHPKDEESSTLC*RVARME
Trigger: CTCCATCCTAGCCACCCGCAAGCAGAGTGTGGAGGA...TTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp ATTGATCTAAGCCCGCAGGTCCTCTTTCCCTCACAGCTCCCAAGGGCATCTTGTATTCCGGCCATACTTTaGCCAATGATCTTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: IDLSPQVLFPSQLPRASCIPAIL*PMIFEN
Trigger: ATTCTCAAAGATCATTGGCAAAAGTATGGCCGGAAT...ACAAGATGCCCTTGGGAGCTGTGAGGGAAAGAGGACCTGCGGGCTTAGATCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGACTAAAATAGAGGGTTaGCATGGACGATCACTCTCA +
Preference number: 5 (lower is better)
Translates to: SQGHLVWQCLVNALLVNWTKIEG*HGRSLS
Trigger: TGAGAGTGATCGTCCATGCAAACCCTCTATTTTAGT...CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS TCA 90 bp TTCAAAGTTATCGGCCTTCTCCACAGTGTAAACTTTGTCATTTGCTaGGAACTGCTTCCCCACAAAGGAGCGATCAAACATCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: FKVIGLLHSVNFVIC*ELLPHKGAIKHQGL
Trigger: GAGGCCCTGATGTTTGATCGCTCCTTTGTGGGGAAGCAGTTCTCAGCAAATGACAAAGTTTACACTGTGGAGAAGGCCGATAACTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000483707.1
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGAAATTTTATCAGTTATaGCTTCTGGAGCAGGACCTC +
Preference number: 5 (lower is better)
Translates to: SQGHLVWQCLVNALLVNWKFYQL*LLEQDL
Trigger: GAGGTCCTGCTCCAGAAGCAATAACTGATAAAATTT...CCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTGTCCACTGTGAAGGGTTaGAACTTATTTTCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: FPHSSQGHLVWQCLVNALSTVKG*NLFSKS
Trigger: TGACTTGGAAAATAAGTTCAAACCCTTCACAGTGGA...CAGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATTGAGATTGATCAAGTCCTTCATCATTTaGTTTGCGCCCTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: KYPRSSNAGGHEKELRLIKSFII*FAPSAS
Trigger: GGAAGCTGAGGGCGCAAACAAAATGATGAAGGACTT...GATCAATCTCAATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATAAGCGACCGATCCCATaGGCAGCTGCCATCTGCACT +
Preference number: 5 (lower is better)
Translates to: FTKEKGTCTIISLPHPKDKRPIP*AAAICT
Trigger: AGTGCAGATGGCAGCTGCCAATGGGATCGGTCGCTT...ATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR CAA 90 bp GCTAAGGAGACAAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATTCCACTGTGAAGGGTTaGAACTTATTTTCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: AKETNTHAAAMQEGMKRNSTVKG*NLFSKS
Trigger: TGACTTGGAAAATAAGTTCAAACCCTTCACAGTGGA...ATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTTGTCTCCTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAACAAAGAACCCATGCTaGCCCAGAATCATGTTTCGA +
Preference number: 5 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRTKNPC*PRIMFR
Trigger: TCGAAACATGATTCTGGGCAAGCATGGGTTCTTTGT...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAACCTTCATCATTTTGTTaGCGCCCTCAGCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: LAVPCKCTARQLVSEKVKPSSFC*RPQLPP
Trigger: AGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAGG...TTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAAGCAAGCCCTGATTTCTaGAAATGCTTCCATCCACTG +
Preference number: 5 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKASPDF*KCFHPL
Trigger: CAGTGGATGGAAGCATTTCAAGAAATCAGGGCTTGC...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GAAAGATTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTCTTCAATCAGATGACTaGGATGGGTCCGGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: ERFTKEKGTCTIISLPHPLQSDD*DGSGGG
Trigger: TCCACCCCCGGACCCATCCAAGTCATCTGATTGAAG...AGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAATCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS GCA 90 bp TTCTATCGCACACTATCCGCTCTTCAAGACATAATTGGTTTTAGGTaGAGGCACCTCTTCTTTCCCAATCCAAAATGTTCTCTCTCTCGC +
Preference number: 5 (lower is better)
Translates to: FYRTLSALQDIIGFR*RHLFFPNPKCSLSR
Trigger: GCGAGAGAGAGAACATTTTGGATTGGGAAAGAAGAGGTGCCTGCACCTAAAACCAATTATGTCTTGAAGAGCGGATAGTGTGCGATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473117.2
CDS-3UTR CAA 90 bp GTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAAAACTTCCAGCCAGTaGGGGTCTCATACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: VWQCLVNALLVNWLVKKSKTSSQ*GSHTKQ
Trigger: TTGCTTTGTATGAGACCCCAACTGGCTGGAAGTTTT...TGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp CTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTCCTTCATCATTTTGTTaGCGCCCTCAGCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: LTQRKELIGQKALEIAFCPSSFC*RPQLPP
Trigger: AGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAGG...ACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AAATACCCACGCAGCAGCAATGCAGGAGGGCATGAAAAGGAATTGAGATTGATCTGCACCATCATTTCATaGCCACATCCTAAGGATGAA +
Preference number: 5 (lower is better)
Translates to: KYPRSSNAGGHEKELRLICTIIS*PHPKDE
Trigger: TTCATCCTTAGGATGTGGCAATGAAATGATGGTGCA...GATCAATCTCAATTCCTTTTCATGCCCTCCTGCATTGCTGCTGCGTGGGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTTCCCTCACAGCTCCCAAGGGCATCTTGTTTGGCAGTGCCTTGTAAATGCACTAATTCCTTGTTGTTGTaGTCCCTTGTGAACAAGTTA +
Preference number: 5 (lower is better)
Translates to: FPSQLPRASCLAVPCKCTNSLLL*SLVNKL
Trigger: TAACTTGTTCACAAGGGACAACAACAACAAGGAATT...AGTGCATTTACAAGGCACTGCCAAACAAGATGCCCTTGGGAGCTGTGAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS GCA 90 bp ACAATTTCCACTGTGAAGGGTTTGAACTTATTTTCCAAGTCAAACTaGTGCTTTCCCAGAACACCAAGGTCTACTTTCAGGTCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: TISTVKGLNLFSKSN*CFPRTPRSTFRSGQ
Trigger: TTGCCCTGACCTGAAAGTAGACCTTGGTGTTCTGGGAAAGCAGCAGTTTGACTTGGAAAATAAGTTCAAACCCTTCACAGTGGAAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATCCACAAAGGGACAGTTaGCTCGCGTCCATCAAATTC +
Preference number: 5 (lower is better)
Translates to: FTKEKGTCTIISLPHPKDPQRDS*LASIKF
Trigger: GAATTTGATGGACGCGAGCAAACTGTCCCTTTGTGG...ATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GGACAATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAATTCCGGCCATACTTTaGCCAATGATCTTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: GQCRKTRQKSVAKYVSLRIPAIL*PMIFEN
Trigger: ATTCTCAAAGATCATTGGCAAAAGTATGGCCGGAAT...TCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACATTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp CAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGGCAAGCCCTGATTTCTaGAAATGCTTCCATCCACTG +
Preference number: 5 (lower is better)
Translates to: QKRKELAPSFHCHILRMKASPDF*KCFHPL
Trigger: CAGTGGATGGAAGCATTTCAAGAAATCAGGGCTTGC...CTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAATGCACCATCATTTCATaGCCACATCCTAAGGATGAA +
Preference number: 5 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKCTIIS*PHPKDE
Trigger: TTCATCCTTAGGATGTGGCAATGAAATGATGGTGCA...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAATCTTCCGTAATCCACTaGTTCCTGGTTTCTGATCGT +
Preference number: 5 (lower is better)
Translates to: SCLAVPCKCTARQLVSEKSSVIH*FLVSDR
Trigger: ACGATCAGAAACCAGGAACAAGTGGATTACGGAAGA...TTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS CCA 90 bp TTATTAAAGTACCGCCCATCTCCACCAACCACCAGTGATGATCCCTaGCGATCTTTTAGGTCTATGGAAAAGAATATACTCTGGATGAAA +
Preference number: 5 (lower is better)
Translates to: LLKYRPSPPTTSDDP*RSFRSMEKNILWMK
Trigger: TTTCATCCAGAGTATATTCTTTTCCATAGACCTAAAAGATCGCCAGGGATCATCACTGGTGGTTGGTGGAGATGGGCGGTACTTTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR CAA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAAAAATTTTATCAGTTATaGCTTCTGGAGCAGGACCTC +
Preference number: 5 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKKFYQL*LLEQDL
Trigger: GAGGTCCTGCTCCAGAAGCAATAACTGATAAAATTT...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTGGAATGCTGAAGATGTaGGCAGCAATGACAGCCACA +
Preference number: 5 (lower is better)
Translates to: KELIGQKALEIAFCWVTCGMLKM*AAMTAT
Trigger: TGTGGCTGTCATTGCTGCCAACATCTTCAGCATTCC...ACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAAATTCCGGCCATACTTTaGCCAATGATCTTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKIPAIL*PMIFEN
Trigger: ATTCTCAAAGATCATTGGCAAAAGTATGGCCGGAAT...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp ATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTAAACAGGAACCTTCATCATTTTGTTaGCGCCCTCAGCTTCCACCT +
Preference number: 5 (lower is better)
Translates to: IGQKALEIAFCWVTCKQEPSSFC*RPQLPP
Trigger: AGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAGG...TTCCTGTTTACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GAAAGATTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGTCCTTCATCATTTaGTTTGCGCCCTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: ERFTKEKGTCTIISLPHPKSFII*FAPSAS
Trigger: GGAAGCTGAGGGCGCAAACAAAATGATGAAGGACTT...AGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAATCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTCCAAGGGCATCTTGTTaGGCAGTGCCTTGTAAATGC +
Preference number: 5 (lower is better)
Translates to: VNALLVNWLVKKSNPKMLPRASC*AVPCKC
Trigger: GCATTTACAAGGCACTGCCAAACAAGATGCCCTTGG...AAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAATGGCCTCACTAAAAGAGAAAGGAACTaGCACCATCATTTCATTGCC +
Preference number: 5 (lower is better)
Translates to: ELAPSFHCHILRMKNGLTKRERN*HHHFIA
Trigger: GGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTT...AGTGAGGCCATTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp ATGTCGCAAAACAAGGCAGAAATCTGTAGCCAAGTACGTCTCACTCAGAGGAAAAAAAGAGAAAGGAACTaGCACCATCATTTCATTGCC +
Preference number: 5 (lower is better)
Translates to: MSQNKAEICSQVRLTQRKKRERN*HHHFIA
Trigger: GGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTT...TTTCCTCTGAGTGAGACGTACTTGGCTACAGATTTCTGCCTTGTTTTGCGACAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp CAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTATCCCACCAATGGCTTaGATTTTTCTAATGATGCAG +
Preference number: 5 (lower is better)
Translates to: QCLVNALLVNWLVKKSNPIPPMA*IFLMMQ
Trigger: CTGCATCATTAGAAAAATCAAAGCCATTGGTGGGAT...AGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TCTTGTTTGGCAGTGCCTTGTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAAAATTTTATCAGTTATaGCTTCTGGAGCAGGACCTC +
Preference number: 5 (lower is better)
Translates to: SCLAVPCKCTARQLVSEKKFYQL*LLEQDL
Trigger: GAGGTCCTGCTCCAGAAGCAATAACTGATAAAATTT...TTTTTCACTAACCAGTTGACGAGCAGTGCATTTACAAGGCACTGCCAAACAAGA
41% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTGGATCTTCAGTCGGTTaGGCCCAGAAAGTAGTTCTT +
Preference number: 5 (lower is better)
Translates to: KELIGQKALEIAFCWVTCGSSVG*AQKVVL
Trigger: AAGAACTACTTTCTGGGCCAAACCGACTGAAGATCC...ACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp CTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGTGAATACAAAACTTCCAGCCAGTaGGGGTCTCATACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: LLVNWLVKKSNPKMLGEYKTSSQ*GSHTKQ
Trigger: TTGCTTTGTATGAGACCCCAACTGGCTGGAAGTTTT...GTATTCACCAAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATGAAGAAAAAACTTCCAGCCAGTaGGGGTCTCATACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: KEKGTCTIISLPHPKDEEKTSSQ*GSHTKQ
Trigger: TTGCTTTGTATGAGACCCCAACTGGCTGGAAGTTTT...TTCTTCATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGCAAGCCCTGATTTCTaGAAATGCTTCCATCCACTG +
Preference number: 5 (lower is better)
Translates to: VNALLVNWLVKKSNPKMLASPDF*KCFHPL
Trigger: CAGTGGATGGAAGCATTTCAAGAAATCAGGGCTTGC...AAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACAGCTTGGTTAATTCCTaGTTGTTGTTGTCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: EERTDWTEGTRNCILLGYSLVNS*LLLSLV
Trigger: CACAAGGGACAACAACAACAAGGAATTAACCAAGCT...GTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR CAA 90 bp TCTCACTCAGAGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGATCCCACCAATGGCTTaGATTTTTCTAATGATGCAG +
Preference number: 5 (lower is better)
Translates to: SHSEERTDWTEGTRNCILIPPMA*IFLMMQ
Trigger: CTGCATCATTAGAAAAATCAAAGCCATTGGTGGGAT...CAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCTCTGAGTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATTGTAAACTTTGTCATTaGCTGAGAACTGCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: FTKEKGTCTIISLPHPKDCKLCH*LRTASP
Trigger: TGGGGAAGCAGTTCTCAGCAAATGACAAAGTTTACA...ATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGCACCATCATTTCATaGCCACATCCTAAGGATGAA +
Preference number: 5 (lower is better)
Translates to: RKELIGQKALEIAFCWVTCTIIS*PHPKDE
Trigger: TTCATCCTTAGGATGTGGCAATGAAATGATGGTGCA...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp CTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGGTGAATACTGCACCATCATTTCATaGCCACATCCTAAGGATGAA +
Preference number: 5 (lower is better)
Translates to: LLVNWLVKKSNPKMLGEYCTIIS*PHPKDE
Trigger: TTCATCCTTAGGATGTGGCAATGAAATGATGGTGCA...GTATTCACCAAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS CCA 90 bp TTCAGGTCAGGGCAAACTGCATATTCTTCAATTGTCTTGCTGATTTaGAAAATTTTATCAGTTATTGCTTCTGGAGCAGGACCTCCATTA +
Preference number: 5 (lower is better)
Translates to: FRSGQTAYSSIVLLI*KILSVIASGAGPPL
Trigger: TAATGGAGGTCCTGCTCCAGAAGCAATAACTGATAAAATTTTCCAAATCAGCAAGACAATTGAAGAATATGCAGTTTGCCCTGACCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GAAAGATTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTATCCCACCAATGGCTTaGATTTTTCTAATGATGCAG +
Preference number: 5 (lower is better)
Translates to: ERFTKEKGTCTIISLPHPIPPMA*IFLMMQ
Trigger: CTGCATCATTAGAAAAATCAAAGCCATTGGTGGGAT...AGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAATCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACAATTCCGGCCATACTTTaGCCAATGATCTTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: RKELIGQKALEIAFCWVTIPAIL*PMIFEN
Trigger: ATTCTCAAAGATCATTGGCAAAAGTATGGCCGGAAT...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp AGGAAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACAAAAAGAGAAAGGAACTaGCACCATCATTTCATTGCC +
Preference number: 5 (lower is better)
Translates to: RKELIGQKALEIAFCWVTKRERN*HHHFIA
Trigger: GGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTT...TGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp TTCACAAAAGAGAAAGGAACTTGCACCATCATTTCATTGCCACATCCTAAGGATTTGGTTAATTCCTTGTaGTTGTTGTCCCTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: FTKEKGTCTIISLPHPKDLVNSL*LLSLVN
Trigger: GTTCACAAGGGACAACAACAACAAGGAATTAACCAA...ATCCTTAGGATGTGGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS-3UTR CAA 90 bp AAAGAACTGATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTAAATTTTATCAGTTATaGCTTCTGGAGCAGGACCTC +
Preference number: 5 (lower is better)
Translates to: KELIGQKALEIAFCWVTCKFYQL*LLEQDL
Trigger: GAGGTCCTGCTCCAGAAGCAATAACTGATAAAATTT...ACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAATCAGTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp ATTGGACAGAAGGCACTAGAAATTGCATTTTGTTGGGTTACATGTAAACAGGAAAAAAGAGAAAGGAACTaGCACCATCATTTCATTGCC +
Preference number: 5 (lower is better)
Translates to: IGQKALEIAFCWVTCKQEKRERN*HHHFIA
Trigger: GGCAATGAAATGATGGTGCAAGTTCCTTTCTCTTTT...TTCCTGTTTACATGTAACCCAACAAAATGCAATTTCTAGTGCCTTCTGTCCAAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS-3UTR CAA 90 bp GTAAATGCACTGCTCGTCAACTGGTTAGTGAAAAAGTCAAATCCTAAAATGCTTGTTAATTCCTTGTTGTaGTTGTCCCTTGTGAACAAG +
Preference number: 5 (lower is better)
Translates to: VNALLVNWLVKKSNPKMLVNSLL*LSLVNK
Trigger: CTTGTTCACAAGGGACAACAACAACAAGGAATTAAC...AAGCATTTTAGGATTTGACTTTTTCACTAACCAGTTGACGAGCAGTGCATTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS GCA 72 bp CACCTCCCGGCGCCCCGGGAGTCAGGCGAGCAGGTCTaGCGGGTCCCGTGGCCACTTTCCCCAGCCCGGCGA +
Preference number: 6 (lower is better)
Translates to: HLPAPRESGEQV*RVPWPLSPARR
Trigger: TCGCCGGGCTGGGGAAAGTGGCCACGGGACCCGGCAGACCTGCTCGCCTGACTCCCGGGGCGCCGGGAGGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS CCA 72 bp CCCCGGGAGTCAGGCGAGCAGGTCTGCCGGGTCCCGTaGCCACTTTCCCCAGCCCGGCGACCTCCGTCGGGC +
Preference number: 6 (lower is better)
Translates to: PRESGEQVCRVP*PLSPARRPPSG
Trigger: GCCCGACGGAGGTCGCCGGGCTGGGGAAAGTGGCCACGGGACCCGGCAGACCTGCTCGCCTGACTCCCGGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS TCA 72 bp GAGGGAAGGCAGCGGCTAGAGACGGAGAGTCGGGCGTaGCCTTGGGAGGCTCCGCGCCCGCACCTCCCGGCG +
Preference number: 6 (lower is better)
Translates to: EGRQRLETESRA*PWEAPRPHLPA
Trigger: CGCCGGGAGGTGCGGGCGCGGAGCCTCCCAAGGTCACGCCCGACTCTCCGTCTCTAGCCGCTGCCTTCCCTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS CCA 72 bp TCATGTAGAACCGGCCGTCCCCGCCCACCACCAGCGTaGCCTCCTGCCGCTGCGCCGGCTCCACGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: SCRTGRPRPPPA*PPAAAPAPRWR
Trigger: TCTCCACCGTGGAGCCGGCGCAGCGGCAGGAGGCCACGCTGGTGGTGGGCGGGGACGGCCGGTTCTACATGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS CAA 90 bp GTACGCCTGGGTCTTAACTGTCACGATCTTCACCATGGTGGCGACTaGCTGCCGGGGGTCAGAGCGGCGGACTTGGCTGGCGGAGGGGCG +
Preference number: 6 (lower is better)
Translates to: VRLGLNCHDLHHGGD*LPGVRAADLAGGGA
Trigger: CGCCCCTCCGCCAGCCAAGTCCGCCGCTCTGACCCCCGGCAGCAAGTCGCCACCATGGTGAAGATCGTGACAGTTAAGACCCAGGCGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS TCA 72 bp AGCGACCGATCCCGTTGGCGGCAGCGATGCGAGCGATaGGCTGGATGGCCTCCTTCATGTAGAACCGGCCGT +
Preference number: 6 (lower is better)
Translates to: SDRSRWRQRCER*AGWPPSCRTGR
Trigger: ACGGCCGGTTCTACATGAAGGAGGCCATCCAGCTCATCGCTCGCATCGCTGCCGCCAACGGGATCGGTCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS CCA 72 bp CGCTTCCGCAGCCCGCTCGTGCCCGGCTTCTGGTCCTaGTACGCCTGGGTCTTAACTGTCACGATCTTCACC +
Preference number: 6 (lower is better)
Translates to: RFRSPLVPGFWS*YAWVLTVTIFT
Trigger: GGTGAAGATCGTGACAGTTAAGACCCAGGCGTACCAGGACCAGAAGCCGGGCACGAGCGGGCTGCGGAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS CCA 72 bp TTCACCCGCTTCCGCAGCCCGCTCGTGCCCGGCTTCTaGTCCTGGTACGCCTGGGTCTTAACTGTCACGATC +
Preference number: 6 (lower is better)
Translates to: FTRFRSPLVPGF*SWYAWVLTVTI
Trigger: GATCGTGACAGTTAAGACCCAGGCGTACCAGGACCAGAAGCCGGGCACGAGCGGGCTGCGGAAGCGGGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS GCA 72 bp TTAACTGTCACGATCTTCACCATGGTGGCGACTTGCTaGCGGGGGTCAGAGCGGCGGACTTGGCTGGCGGAG +
Preference number: 6 (lower is better)
Translates to: LTVTIFTMVATC*RGSERRTWLAE
Trigger: CTCCGCCAGCCAAGTCCGCCGCTCTGACCCCCGGCAGCAAGTCGCCACCATGGTGAAGATCGTGACAGTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS GCA 72 bp GTCTTAACTGTCACGATCTTCACCATGGTGGCGACTTaGTGCCGGGGGTCAGAGCGGCGGACTTGGCTGGCG +
Preference number: 6 (lower is better)
Translates to: VLTVTIFTMVAT*CRGSERRTWLA
Trigger: CGCCAGCCAAGTCCGCCGCTCTGACCCCCGGCAGCAAGTCGCCACCATGGTGAAGATCGTGACAGTTAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS CCA 72 bp AGCCCGCTCGTGCCCGGCTTCTGGTCCTGGTACGCCTaGGTCTTAACTGTCACGATCTTCACCATGGTGGCG +
Preference number: 6 (lower is better)
Translates to: SPLVPGFWSWYA*VLTVTIFTMVA
Trigger: CGCCACCATGGTGAAGATCGTGACAGTTAAGACCCAGGCGTACCAGGACCAGAAGCCGGGCACGAGCGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS CAA 72 bp GGTCTTAACTGTCACGATCTTCACCATGGTGGCGACTaGCTGCCGGGGGTCAGAGCGGCGGACTTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: GLNCHDLHHGGD*LPGVRAADLAG
Trigger: GCCAGCCAAGTCCGCCGCTCTGACCCCCGGCAGCAAGTCGCCACCATGGTGAAGATCGTGACAGTTAAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371084.8
ENST00000650546.1
CDS GCA 72 bp CGATGTACAGCCGAATGGTGGCCCCGGCACTCCCAGTaGCGCTCAGTCGGAAGACGATTCGAGAACCATCTG +
Preference number: 6 (lower is better)
Translates to: RCTAEWWPRHSQ*RSVGRRFENHL
Trigger: CAGATGGTTCTCGAATCGTCTTCCGACTGAGCGGCACTGGGAGTGCCGGGGCCACCATTCGGCTGTACATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000483707.1
ENST00000540265.5
ENST00000650546.1
CDS CCA 72 bp CGTCCTTCTCATAGCTATCGATGTACAGCCGAATGGTaGCCCCGGCACTCCCAGTGCCGCTCAGTCGGAAGA +
Preference number: 6 (lower is better)
Translates to: RPSHSYRCTAEW*PRHSQCRSVGR
Trigger: TCTTCCGACTGAGCGGCACTGGGAGTGCCGGGGCCACCATTCGGCTGTACATCGATAGCTATGAGAAGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000483707.1
ENST00000540265.5
ENST00000650546.1
CDS CCA 72 bp CAACGTCCTTCTCATAGCTATCGATGTACAGCCGAATaGTGGCCCCGGCACTCCCAGTGCCGCTCAGTCGGA +
Preference number: 6 (lower is better)
Translates to: QRPSHSYRCTAE*WPRHSQCRSVG
Trigger: TCCGACTGAGCGGCACTGGGAGTGCCGGGGCCACCATTCGGCTGTACATCGATAGCTATGAGAAGGACGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000483707.1
ENST00000540265.5
ENST00000650546.1
CDS GCA 72 bp GACAGCACTCTGCGCCGTAATCGTATCTTCCAAGGCTaGAAGGTTAGGGCAAATGTCAGACGCCTCGGGAGG +
Preference number: 6 (lower is better)
Translates to: DSTLRRNRIFQG*KVRANVRRLGR
Trigger: CCTCCCGAGGCGTCTGACATTTGCCCTAACCTTGCAGCCTTGGAAGATACGATTACGGCGCAGAGTGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS TCA 72 bp TACCTGGAAGAAGTCACGAAGTTGAGGCCCACGGGCTaGCTGCAGATCACACCAAGGCCTATCAGTCAGCAC +
Preference number: 6 (lower is better)
Translates to: YLEEVTKLRPTG*LQITPRPISQH
Trigger: GTGCTGACTGATAGGCCTTGGTGTGATCTGCAGTCAGCCCGTGGGCCTCAACTTCGTGACTTCTTCCAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483707.1
CDS TCA 72 bp CCTCCTCGTAATCATACCTGGAAGAAGTCACGAAGTTaGGGCCCACGGGCTGACTGCAGATCACACCAAGGC +
Preference number: 6 (lower is better)
Translates to: PPRNHTWKKSRS*GPRADCRSHQG
Trigger: GCCTTGGTGTGATCTGCAGTCAGCCCGTGGGCCTCAACTTCGTGACTTCTTCCAGGTATGATTACGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483707.1
CDS GCA 72 bp AGCGACCGATCTTTCCTGCTTAAGGCGACAGCACTCTaGGCCGTAATCGTATCTTCCAAGGCTGCAAGGTTA +
Preference number: 6 (lower is better)
Translates to: SDRSFLLKATAL*AVIVSSKAARL
Trigger: TAACCTTGCAGCCTTGGAAGATACGATTACGGCGCAGAGTGCTGTCGCCTTAAGCAGGAAAGATCGGTCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540265.5
CDS CAA 90 bp GCAATGACAGCCACAGAGTCTGAAGGGTTCACAAAGAACCCATGCTaGCCCAGAATCATGTTTCGATCCCCATCTCCATCAAAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: AMTATESEGFTKNPC*PRIMFRSPSPSKAA
Trigger: GGCTGCCTTTGATGGAGATGGGGATCGAAACATGATTCTGGGCAAGCATGGGTTCTTTGTGAACCCTTCAGACTCTGTGGCTGTCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS TCA 72 bp ATCTCCATCAAAGGCAGCCCCAAAATCATGCTCTCCTaGCTTCATGGTCTCCACCAGGTCAGCTGCATAGGT +
Preference number: 6 (lower is better)
Translates to: ISIKGSPKIMLS*LHGLHQVSCIG
Trigger: ACCTATGCAGCTGACCTGGTGGAGACCATGAAGTCAGGAGAGCATGATTTTGGGGCTGCCTTTGATGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS CAA 90 bp AGGAGCGATCAAACATCAGGGCCTCCAAGTCCTTCATCATTTTGTTaGCGCCCTCAGCTTCCACCTCCTCGTAATCATACCTGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: RSDQTSGPPSPSSFC*RPQLPPPRNHTWKK
Trigger: CTTCTTCCAGGTATGATTACGAGGAGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAGGACTTGGAGGCCCTGATGTTTGATCGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483707.1
CDS TCA 72 bp AAATCACTCATCCTTCACTTCCACCGACTGGCTCAGTaGGGGTGTCCAGAAAGCAGTCAAGGGACTCCAAAA +
Preference number: 6 (lower is better)
Translates to: KSLILHFHRLAQ*GCPESSQGTPK
Trigger: TTTTGGAGTCCCTTGACTGCTTTCTGGACACCCTCACTGAGCCAGTCGGTGGAAGTGAAGGATGAGTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS GCA 72 bp TTGTATGCTCCTTTCCTGCTTAAGGCGACAGCACTCTaGGCCGTAATCGTATCTTCCAAGGCTGCAAGGTTA +
Preference number: 6 (lower is better)
Translates to: LYAPFLLKATAL*AVIVSSKAARL
Trigger: TAACCTTGCAGCCTTGGAAGATACGATTACGGCGCAGAGTGCTGTCGCCTTAAGCAGGAAAGGAGCATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473117.2
CDS CAA 72 bp GCCACAGAGTCTGAAGGGTTCACAAAGAACCCATGCTaGCCCAGAATCATGTTTCGATCCCCATCTCCATCA +
Preference number: 6 (lower is better)
Translates to: ATESEGFTKNPC*PRIMFRSPSPS
Trigger: TGATGGAGATGGGGATCGAAACATGATTCTGGGCAAGCATGGGTTCTTTGTGAACCCTTCAGACTCTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS CAA 72 bp CAAACATCAGGGCCTCCAAGTCCTTCATCATTTTGTTaGCGCCCTCAGCTTCCACCTCCTCGTAATCATACC +
Preference number: 6 (lower is better)
Translates to: QTSGPPSPSSFC*RPQLPPPRNHT
Trigger: GGTATGATTACGAGGAGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAGGACTTGGAGGCCCTGATGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000483707.1
ENST00000540265.5
ENST00000650546.1
CDS GCA 72 bp CCACAGAGTCTGAAGGGTTCACAAAGAACCCATGCTTaGCCAGAATCATGTTTCGATCCCCATCTCCATCAA +
Preference number: 6 (lower is better)
Translates to: PQSLKGSQRTHA*PESCFDPHLHQ
Trigger: TTGATGGAGATGGGGATCGAAACATGATTCTGGGCAAGCATGGGTTCTTTGTGAACCCTTCAGACTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000540265.5
ENST00000650546.1
CDS GCA 72 bp AAACATCAGGGCCTCCAAGTCCTTCATCATTTTGTTTaGGCCCTCAGCTTCCACCTCCTCGTAATCATACCT +
Preference number: 6 (lower is better)
Translates to: KHQGLQVLHHFV*ALSFHLLVIIP
Trigger: AGGTATGATTACGAGGAGGTGGAAGCTGAGGGCGCAAACAAAATGATGAAGGACTTGGAGGCCCTGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000483707.1
ENST00000540265.5
ENST00000650546.1
CDS CAA 90 bp CTGCAGATCACACCAAGGCCTATCAGTCAGCACTTTCTTCATCATTaGTTTGGCCCTCCCGCAAAACTATCTAACTTCAGAAGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: LQITPRPISQHFLHH*FGPPAKLSNFRRSW
Trigger: CCAGCTTCTTCTGAAGTTAGATAGTTTTGCGGGAGGGCCAAACAAATGATGAAGAAAGTGCTGACTGATAGGCCTTGGTGTGATCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483707.1
CDS CCA 72 bp TACCGCCCATCTCCACCAACCACCAGTGATGATCCCTaGCGATCTTTTAGGTCTATGGAAAAGAATATACTC +
Preference number: 6 (lower is better)
Translates to: YRPSPPTTSDDP*RSFRSMEKNIL
Trigger: GAGTATATTCTTTTCCATAGACCTAAAAGATCGCCAGGGATCATCACTGGTGGTTGGTGGAGATGGGCGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS TCA 72 bp ATCGGCCTTCTCCACAGTGTAAACTTTGTCATTTGCTaGGAACTGCTTCCCCACAAAGGAGCGATCAAACAT +
Preference number: 6 (lower is better)
Translates to: IGLLHSVNFVIC*ELLPHKGAIKH
Trigger: ATGTTTGATCGCTCCTTTGTGGGGAAGCAGTTCTCAGCAAATGACAAAGTTTACACTGTGGAGAAGGCCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000483707.1
ENST00000540265.5
ENST00000650546.1
CDS CAA 72 bp AGTTATCGGCCTTCTCCACAGTGTAAACTTTGTCATTaGCTGAGAACTGCTTCCCCACAAAGGAGCGATCAA +
Preference number: 6 (lower is better)
Translates to: SYRPSPQCKLCH*LRTASPQRSDQ
Trigger: TTGATCGCTCCTTTGTGGGGAAGCAGTTCTCAGCAAATGACAAAGTTTACACTGTGGAGAAGGCCGATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000483707.1
ENST00000540265.5
ENST00000650546.1
CDS CAA 90 bp TGTATTCAAAGTTATCGGCCTTCTCCACAGTGTAAACTTTGTCATTaGCTGAGAACTGCTTCCCCACAAAGGAGCGATCAAACATCAGGG +
Preference number: 6 (lower is better)
Translates to: CIQSYRPSPQCKLCH*LRTASPQRSDQTSG
Trigger: CCCTGATGTTTGATCGCTCCTTTGTGGGGAAGCAGTTCTCAGCAAATGACAAAGTTTACACTGTGGAGAAGGCCGATAACTTTGAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371083.4
ENST00000371084.8
ENST00000483707.1
ENST00000540265.5
ENST00000650546.1
CDS CAA 90 bp AGATCACACCAAGGCCTATCAGTCAGCACTTTCTTCATCATTTGTTaGGCCCTCCCGCAAAACTATCTAACTTCAGAAGAAGCTGGCAAA +
Preference number: 6 (lower is better)
Translates to: RSHQGLSVSTFFIIC*ALPQNYLTSEEAGK
Trigger: TTTGCCAGCTTCTTCTGAAGTTAGATAGTTTTGCGGGAGGGCCAAACAAATGATGAAGAAAGTGCTGACTGATAGGCCTTGGTGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483707.1
CDS CAA 72 bp ACACCAAGGCCTATCAGTCAGCACTTTCTTCATCATTaGTTTGGCCCTCCCGCAAAACTATCTAACTTCAGA +
Preference number: 6 (lower is better)
Translates to: TPRPISQHFLHH*FGPPAKLSNFR
Trigger: TCTGAAGTTAGATAGTTTTGCGGGAGGGCCAAACAAATGATGAAGAAAGTGCTGACTGATAGGCCTTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483707.1
CDS GCA 72 bp ATAACCAAGCGACCGATCCCATTGGCAGCTGCCATCTaGACTATTGTTTCTATTGCTGATTTATTAAAGTAC +
Preference number: 6 (lower is better)
Translates to: ITKRPIPLAAAI*TIVSIADLLKY
Trigger: GTACTTTAATAAATCAGCAATAGAAACAATAGTGCAGATGGCAGCTGCCAATGGGATCGGTCGCTTGGTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371083.4
CDS GCA 72 bp ACACTATCCGCTCTTCAAGACATAATTGGTTTTAGGTaGAGGCACCTCTTCTTTCCCAATCCAAAATGTTCT +
Preference number: 6 (lower is better)
Translates to: TLSALQDIIGFR*RHLFFPNPKCS
Trigger: AGAACATTTTGGATTGGGAAAGAAGAGGTGCCTGCACCTAAAACCAATTATGTCTTGAAGAGCGGATAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473117.2
CDS CAA 90 bp TCAGGGAAGGGTTATGAGCTTCTGAATAAGCAGAAAACACCCATCTaGGCATTTCTACAGAATAAAGCTCTAAGATGTTTCAAAGGCTTT +
Preference number: 6 (lower is better)
Translates to: SGKGYELLNKQKTPI*AFLQNKALRCFKGF
Trigger: AAAGCCTTTGAAACATCTTAGAGCTTTATTCTGTAGAAATGCCAAGATGGGTGTTTTCTGCTTATTCAGAAGCTCATAACCCTTCCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483707.1