Pregenerated sensors for PGK1 (Homo sapiens)
Ensembl gene IDs: ENSG00000102144Ensembl transcript IDs: ENST00000373316.5, ENST00000474281.1, ENST00000477335.5, ENST00000644362.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGTATATACCTGAAAAACTCAAGAGTTGAAAGTGGTCACCTCTaGGGAGTGGGAATCTTGAATGGGAGGAATGGGCTGGGGCTTTTT | + |
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Preference number: 1 (lower is better) Translates to: GGIYLKNSRVESGHL*GVGILNGRNGLGLF Trigger: AAAAAGCCCCAGCCCATTCCTCCCATTCAAGATTCCCACTCCCCAGAGGTGACCACTTTCAACTCTTGAGTTTTTCAGGTATATACCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR GCA 90 bp | AAAAGCATCAGCCACTGGAACCAGACAAACCTGGACTTGAATCCCTaGTGTTACTTACTAGCTCTGTGGTCCTGTCCAAAAGTTTATTTC | + |
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Preference number: 1 (lower is better) Translates to: KSISHWNQTNLDLNP*CYLLALWSCPKVYF Trigger: GAAATAAACTTTTGGACAGGACCACAGAGCTAGTAAGTAACAGCAGGGATTCAAGTCCAGGTTTGTCTGGTTCCAGTGGCTGATGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR GCA 90 bp | ATTTATCTAATTGTCCCATCTCTCCACTGCTGCTGCCCCACTTCTTaGATTCAGCAATATAGACATCTGATCCGTTCCTCAAGATTCTAT | + |
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Preference number: 1 (lower is better) Translates to: IYLIVPSLHCCCPTS*IQQYRHLIRSSRFY Trigger: ATAGAATCTTGAGGAACGGATCAGATGTCTATATTGCTGAATGCAAGAAGTGGGGCAGCAGCAGTGGAGAGATGGGACAATTAGATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR TCA 90 bp | TATTACTTAGAAACATGGAGGTATATACCTGAAAAACTCAAGAGTTaGAAGTGGTCACCTCTGGGGAGTGGGAATCTTGAATGGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: YYLETWRYIPEKLKS*KWSPLGSGNLEWEE Trigger: TTCCTCCCATTCAAGATTCCCACTCCCCAGAGGTGACCACTTTCAACTCTTGAGTTTTTCAGGTATATACCTCCATGTTTCTAAGTAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR CCA 90 bp | CAGACAAACCTGGACTTGAATCCCTGCTGTTACTTACTAGCTCTGTaGTCCTGTCCAAAAGTTTATTTCTTTGTCCCTAAAGGTGAAATA | + |
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Preference number: 1 (lower is better) Translates to: QTNLDLNPCCYLLAL*SCPKVYFFVPKGEI Trigger: TATTTCACCTTTAGGGACAAAGAAATAAACTTTTGGACAGGACCACAGAGCTAGTAAGTAACAGCAGGGATTCAAGTCCAGGTTTGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR CCA 90 bp | TTTGTCCCTAAAGGTGAAATACATATCTTTCCAGCACAGAATTTCTaGTCAGACATGGCTTTTTCAAATCATGTTTACCTCTGCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: FVPKGEIHIFPAQNF*SDMAFSNHVYLCSL Trigger: GAGAGAGCAGAGGTAAACATGATTTGAAAAAGCCATGTCTGACCAGAAATTCTGTGCTGGAAAGATATGTATTTCACCTTTAGGGACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR-3UTR GCA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAGTCCCATCTCTCCACTaGTGCTGCCCCACTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLVPSLH*CCPTSC Trigger: GCAAGAAGTGGGGCAGCAGCAGTGGAGAGATGGGAC...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATAAGTGGGAATCTTGAATaGGAGGAATGGGCTGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: EGIKYKLDKGALRTPAGISGNLE*EEWAGA Trigger: AGCCCCAGCCCATTCCTCCCATTCAAGATTCCCACT...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR CAA 90 bp | GCACATTGGAAAAGCATCAGCCACTGGAACCAGACAAACCTGGACTaGAATCCCTGCTGTTACTTACTAGCTCTGTGGTCCTGTCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: AHWKSISHWNQTNLD*NPCCYLLALWSCPK Trigger: TTTTGGACAGGACCACAGAGCTAGTAAGTAACAGCAGGGATTCAAGTCCAGGTTTGTCTGGTTCCAGTGGCTGATGCTTTTCCAATGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTGGGGAGTGGGAATCTTaGATGGGAGGAATGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TKLYRENEEVEIYVEQSLGEWES*MGGMGW Trigger: CCAGCCCATTCCTCCCATTCAAGATTCCCACTCCCC...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR-3UTR TCA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAGAAAAACTCAAGAGTTaGAAGTGGTCACCTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLEKLKS*KWSPLG Trigger: CCCCAGAGGTGACCACTTTCAACTCTTGAGTTTTTC...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTGTCCCATCTCTCCACTaGTGCTGCCCCACTTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: TKLYRENEEVEIYVEQSLVPSLH*CCPTSC Trigger: GCAAGAAGTGGGGCAGCAGCAGTGGAGAGATGGGAC...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR-3UTR CCA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAGAAAGTGGTCACCTCTaGGGAGTGGGAATCTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLESGHL*GVGILN Trigger: ATTCAAGATTCCCACTCCCCAGAGGTGACCACTTTC...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTCCATCTCTCCACTGCTaGTGCCCCACTTCTTGCATT | + |
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Preference number: 2 (lower is better) Translates to: TKLYRENEEVEIYVEQSLPSLHC*CPTSCI Trigger: AATGCAAGAAGTGGGGCAGCAGCAGTGGAGAGATGG...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR-3UTR CCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTAGTGGGAATCTTGAATaGGAGGAATGGGCTGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: TKLYRENEEVEIYVEQSLSGNLE*EEWAGA Trigger: AGCCCCAGCCCATTCCTCCCATTCAAGATTCCCACT...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR-3UTR CCA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTACCAGCACAGAATTTCTaGTCAGACATGGCTTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLPAQNF*SDMAFS Trigger: TGAAAAAGCCATGTCTGACCAGAAATTCTGTGCTGG...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR-3UTR TCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTGAAAAACTCAAGAGTTaGAAGTGGTCACCTCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: TKLYRENEEVEIYVEQSLEKLKS*KWSPLG Trigger: CCCCAGAGGTGACCACTTTCAACTCTTGAGTTTTTC...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR-3UTR CCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTGAAAGTGGTCACCTCTaGGGAGTGGGAATCTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: TKLYRENEEVEIYVEQSLESGHL*GVGILN Trigger: ATTCAAGATTCCCACTCCCCAGAGGTGACCACTTTC...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR-3UTR CCA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTACAGAGCCTTCCTCCATaGTATGAAATAGATTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLQSLPP*YEIDFF Trigger: AAAGAAATCTATTTCATACCATGGAGGAAGGCTCTG...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR-3UTR GCA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAGTTTATGGGAGTTTATaGTTCTTTCAGTTCCATTTG | + |
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Preference number: 2 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLVYGSL*FFQFHL Trigger: CAAATGGAACTGAAAGAAGCATAAACTCCCATAAAC...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTTGCTGCCCCACTTCTTaGATTCAGCAATATAGACAT | + |
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Preference number: 2 (lower is better) Translates to: TKLYRENEEVEIYVEQSLCCPTS*IQQYRH Trigger: ATGTCTATATTGCTGAATGCAAGAAGTGGGGCAGCA...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR-3UTR TCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTAGCAATATAGACATCTaGTCCGTTCCTCAAGATTCT | + |
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Preference number: 2 (lower is better) Translates to: TKLYRENEEVEIYVEQSLSNIDI*SVPQDS Trigger: AGAATCTTGAGGAACGGATCAGATGTCTATATTGCT...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR-3UTR CAA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAAGGGACGGAGGCACATaGGAAAAGCATCAGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLRDGGT*EKHQPL Trigger: CAGTGGCTGATGCTTTTCCAATGTGCCTCCGTCCCT...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR GCA 72 bp | AGCCACTGGAACCAGACAAACCTGGACTTGAATCCCTaGTGTTACTTACTAGCTCTGTGGTCCTGTCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: SHWNQTNLDLNP*CYLLALWSCPK Trigger: TTTTGGACAGGACCACAGAGCTAGTAAGTAACAGCAGGGATTCAAGTCCAGGTTTGTCTGGTTCCAGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR-3UTR CAA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAGGCATCAAGTACAAATaGGATAAAGGAGCACTAAGG | + |
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Preference number: 3 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLGIKYK*DKGALR Trigger: CCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCC...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR TCA 72 bp | GAAACATGGAGGTATATACCTGAAAAACTCAAGAGTTaGAAGTGGTCACCTCTGGGGAGTGGGAATCTTGAA | + |
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Preference number: 3 (lower is better) Translates to: ETWRYIPEKLKS*KWSPLGSGNLE Trigger: TTCAAGATTCCCACTCCCCAGAGGTGACCACTTTCAACTCTTGAGTTTTTCAGGTATATACCTCCATGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR GCA 72 bp | ATGGACATTTATCTAATTGTCCCATCTCTCCACTGCTaGTGCCCCACTTCTTGCATTCAGCAATATAGACAT | + |
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Preference number: 3 (lower is better) Translates to: MDIYLIVPSLHC*CPTSCIQQYRH Trigger: ATGTCTATATTGCTGAATGCAAGAAGTGGGGCAGCAGCAGTGGAGAGATGGGACAATTAGATAAATGTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| 3UTR-3UTR CAA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAGAAGCTAGTAGAGTCTaGTGTTCTACAAAAAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLEASRV*CSTKSR Trigger: TCTACTTTTTGTAGAACACAAGACTCTACTAGCTTC...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR CCA 72 bp | TACATATCTTTCCAGCACAGAATTTCTGGTCAGACATaGCTTTTTCAAATCATGTTTACCTCTGCTCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: YISFQHRISGQT*LFQIMFTSALS Trigger: GGAGAGAGCAGAGGTAAACATGATTTGAAAAAGCCATGTCTGACCAGAAATTCTGTGCTGGAAAGATATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR TCA 72 bp | TCATTCTTTAGGTTAACAACCCAAATAAATGAGGGGTaGTCCTGGAAACAGTCCAGTAGAAAGTACTTAAAA | + |
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Preference number: 3 (lower is better) Translates to: SFFRLTTQINEG*SWKQSSRKYLK Trigger: TTTTAAGTACTTTCTACTGGACTGTTTCCAGGATCACCCCTCATTTATTTGGGTTGTTAACCTAAAGAATGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR GCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATAAACGAGGGAGCCGACTaGCGACGTGCGCTCCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: EGIKYKLDKGALRTPAGINEGAD*RRALRR Trigger: CCTCCGGAGCGCACGTCGGCAGTCGGCTCCCTCGTT...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR TCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATATGGAGTGCAGTGGCGTaGTCTCGGCTCACTGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: EGIKYKLDKGALRTPAGIWSAVA*SRLTAS Trigger: GCTCGCAGTGAGCCGAGATCACGCCACTGCACTCCA...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR TCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATACAAACTCCTGACAGGTaGTCTGCCCGCCTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: EGIKYKLDKGALRTPAGIQTPDR*SARLGL Trigger: GAGGCCAAGGCGGGCAGATCACCTGTCAGGAGTTTG...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR TCA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTACTGGTCCCAAACTCCTaGCAGGTGATCTGCCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLLVPNS*QVICPP Trigger: AGGCGGGCAGATCACCTGTCAGGAGTTTGGGACCAG...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR GCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATAGTCCCATCTCTCCACTaGTGCTGCCCCACTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: EGIKYKLDKGALRTPAGIVPSLH*CCPTSC Trigger: GCAAGAAGTGGGGCAGCAGCAGTGGAGAGATGGGAC...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR TCA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAGGGGAGTGGGAATCTTaGATGGGAGGAATGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLGEWES*MGGMGW Trigger: CCAGCCCATTCCTCCCATTCAAGATTCCCACTCCCC...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR GCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTAGCCGACTGCCGACGTaGGCTCCGGAGGCTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TKLYRENEEVEIYVEQSLSRLPT*APEACR Trigger: TCTGCAAGCCTCCGGAGCGCACGTCGGCAGTCGGCT...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATAAGCCTTCTGAATAGCTaGGACTACAGTGGCACACGC | + |
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Preference number: 4 (lower is better) Translates to: EGIKYKLDKGALRTPAGISLLNS*DYSGTR Trigger: GCGTGTGCCACTGTAGTCCCAGCTATTCAGAAGGCT...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR CAA 72 bp | AGCTGTACACCCTGCCTAGAGGGCATCAAGTACAAATaGGATAAAGGAGCACTAAGGACTCCTGCAGGGATA | + |
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Preference number: 4 (lower is better) Translates to: SCTPCLEGIKYK*DKGALRTPAGI Trigger: TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTCTAGGCAGGGTGTACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| 3UTR CAA 72 bp | AAAAGCATCAGCCACTGGAACCAGACAAACCTGGACTaGAATCCCTGCTGTTACTTACTAGCTCTGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KSISHWNQTNLD*NPCCYLLALWS Trigger: GGACCACAGAGCTAGTAAGTAACAGCAGGGATTCAAGTCCAGGTTTGTCTGGTTCCAGTGGCTGATGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR TCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTGGGGAGAGAGGTCGGTaGTTCGGTCAACGAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TKLYRENEEVEIYVEQSLGERGR*FGQRGS Trigger: GCTCCCTCGTTGACCGAATCACCGACCTCTCTCCCC...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CCA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAAGTGGGAATCTTGAATaGGAGGAATGGGCTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLSGNLE*EEWAGA Trigger: AGCCCCAGCCCATTCCTCCCATTCAAGATTCCCACT...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATAGAAAGTGGTCACCTCTaGGGAGTGGGAATCTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: EGIKYKLDKGALRTPAGIESGHL*GVGILN Trigger: ATTCAAGATTCCCACTCCCCAGAGGTGACCACTTTC...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATAAAAAGCATCAGCCACTaGAACCAGACAAACCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: EGIKYKLDKGALRTPAGIKSISH*NQTNLD Trigger: GTCCAGGTTTGTCTGGTTCCAGTGGCTGATGCTTTT...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR TCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATACAAATAAATGAGGGGTaGTCCTGGAAACAGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: EGIKYKLDKGALRTPAGIQINEG*SWKQSS Trigger: ACTGGACTGTTTCCAGGATCACCCCTCATTTATTTG...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTCCATGTTGGCCAGGCTaGTCCCAAACTCCTGACAGG | + |
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Preference number: 4 (lower is better) Translates to: TKLYRENEEVEIYVEQSLPCWPG*SQTPDR Trigger: CCTGTCAGGAGTTTGGGACCAGCCTGGCCAACATGG...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR TCA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAAGACAAACCTGGACTTaGATCCCTGCTGTTACTTAC | + |
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Preference number: 4 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLRQTWT*IPAVTY Trigger: GTAAGTAACAGCAGGGATTCAAGTCCAGGTTTGTCT...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATACCAGCACAGAATTTCTaGTCAGACATGGCTTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: EGIKYKLDKGALRTPAGIPAQNF*SDMAFS Trigger: TGAAAAAGCCATGTCTGACCAGAAATTCTGTGCTGG...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CCA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAGTAGAGTCTAGGTGCTaGGTTTATGGGAGTTTATGC | + |
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Preference number: 4 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLVESRC*VYGSLC Trigger: GCATAAACTCCCATAAACCCAGCACCTAGACTCTAC...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR GCA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAGTACACACATGGGTATaGTCTTTATGCAGAGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLVHTWV*SLCRVS Trigger: TGAGACTCTGCATAAAGAGCATACCCATGTGTGTAC...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATACAAGTTGTTTATGACTaGAGATTCCCCCATTCATTC | + |
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Preference number: 4 (lower is better) Translates to: EGIKYKLDKGALRTPAGIQVVYD*RFPHSF Trigger: GAATGAATGGGGGAATCTCCAGTCATAAACAACTTG...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTCTATGGTTAAACCTCTaGAGCTACGCAGACCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: TKLYRENEEVEIYVEQSLLWLNL*SYADRG Trigger: GCCACGGTCTGCGTAGCTCCAGAGGTTTAACCATAG...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644362.1 |
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| CDS-3UTR GCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATAGTACCCATAGAGGTATaGAGAAACATGGTACAATTT | + |
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Preference number: 4 (lower is better) Translates to: EGIKYKLDKGALRTPAGIVPIEV*RNMVQF Trigger: AAATTGTACCATGTTTCTGCATACCTCTATGGGTAC...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CCA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATATACTTACTAGCTCTGTaGTCCTGTCCAAAAGTTTAT | + |
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Preference number: 4 (lower is better) Translates to: EGIKYKLDKGALRTPAGIYLLAL*SCPKVY Trigger: ATAAACTTTTGGACAGGACCACAGAGCTAGTAAGTA...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTCTCCCAAAGTGTTGTTaGGATTACAGGCGTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TKLYRENEEVEIYVEQSLLPKCC*DYRREP Trigger: TGGCTCACGCCTGTAATCCCAACAACACTTTGGGAG...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR TCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTAACAACCCAAATAAATaGGGGGTGATCCTGGAAACA | + |
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Preference number: 4 (lower is better) Translates to: TKLYRENEEVEIYVEQSLNNPNK*GVILET Trigger: TGTTTCCAGGATCACCCCTCATTTATTTGGGTTGTT...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR TCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTTTGACAAGTTGTTTATaGCTGGAGATTCCCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: TKLYRENEEVEIYVEQSLLTSCL*LEIPPF Trigger: GAATGGGGGAATCTCCAGTCATAAACAACTTGTCAA...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CCA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTGGTTTCTCTATCCTATaGTTAAACCTCTGGAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: TKLYRENEEVEIYVEQSLGFSIL*LNLWSY Trigger: GTAGCTCCAGAGGTTTAACCATAGGATAGAGAAACC...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644362.1 |
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| 3UTR CAA 72 bp | CATAGAAGGAACTCAAATATTTGCCTAATTGACAAGTaGTTTATGACTGGAGATTCCCCCATTCATTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: HRRNSNICLIDK*FMTGDSPIHSL Trigger: TAAAGAATGAATGGGGGAATCTCCAGTCATAAACAACTTGTCAATTAGGCAAATATTTGAGTTCCTTCTATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS TCA 90 bp | TCTCCCCAGCAGAAGATTACTTCAAGACCGGAGTTCCCTCTGGACTaGCTCATGAGAACTTCTGAGTTTCTTTCCAAGGCTGATGACCCC | + |
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Preference number: 5 (lower is better) Translates to: SPQQKITSRPEFPLD*LMRTSEFLSKADDP Trigger: GGGGTCATCAGCCTTGGAAAGAAACTCAGAAGTTCTCATGAGTCAGTCCAGAGGGAACTCCGGTCTTGAAGTAATCTTCTGCTGGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477335.5 |
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| CDS CCA 90 bp | AACATTGAAGTCGACTCTGGTTTCTCTATCCTATGGTTAAACCTCTaGAGCTACGCAGACCGTGGCAGCGATAAATCCACGTACGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: NIEVDSGFSILWLNL*SYADRGSDKSTYAG Trigger: GCCTGCGTACGTGGATTTATCGCTGCCACGGTCTGCGTAGCTCCAGAGGTTTAACCATAGGATAGAGAAACCAGAGTCGACTTCAATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644362.1 |
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| CDS TCA 90 bp | TTGAAGTCGACTCTGGTCATATATTTCCTTAGAAGCTTCAAGGACTaGATCCTGACAGGAAACAGGCACCTCCAGGATTCTCTCCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LKSTLVIYFLRSFKD*ILTGNRHLQDSLPS Trigger: GCTGGGGAGAGAATCCTGGAGGTGCCTGTTTCCTGTCAGGATTCAGTCCTTGAAGCTTCTAAGGAAATATATGACCAGAGTCGACTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477335.5 |
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| CDS-3UTR CAA 90 bp | GAGGGCATCAAGTACAAATTGGATAAAGGAGCACTAAGGACTCCTGCAGGGATAGGCTCGGCTTTAACCTaGTTCCCAGAAGCATCTTTT | + |
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Preference number: 5 (lower is better) Translates to: EGIKYKLDKGALRTPAGIGSALT*FPEASF Trigger: AAAAGATGCTTCTGGGAACAAGGTTAAAGCCGAGCC...TATCCCTGCAGGAGTCCTTAGTGCTCCTTTATCCAATTTGTACTTGATGCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CAA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAAAAGTCTTAGAGATTTaGCCTCCCAGGCACCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLKVLEI*PPRHPF Trigger: GAAAGGGTGCCTGGGAGGCAAAATCTCTAAGACTTT...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CAA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTACAGACAAACCTGGACTaGAATCCCTGCTGTTACTTA | + |
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Preference number: 5 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLQTNLD*NPCCYL Trigger: TAAGTAACAGCAGGGATTCAAGTCCAGGTTTGTCTG...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CAA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTAGGGACGGAGGCACATaGGAAAAGCATCAGCCACTG | + |
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Preference number: 5 (lower is better) Translates to: TKLYRENEEVEIYVEQSLRDGGT*EKHQPL Trigger: CAGTGGCTGATGCTTTTCCAATGTGCCTCCGTCCCT...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CAA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTGGCTCGGCTTTAACCTaGTTCCCAGAAGCATCTTTT | + |
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Preference number: 5 (lower is better) Translates to: TKLYRENEEVEIYVEQSLGSALT*FPEASF Trigger: AAAAGATGCTTCTGGGAACAAGGTTAAAGCCGAGCC...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373316.5 ENST00000644362.1 |
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| CDS-3UTR CAA 90 bp | CCATGCCCGGCCCCTTATACTGTTCTAGCTTATATGCACACAAGTTATCTACTAATTGTATACTCCTTTTaGATCATGTGTAAACCCCTG | + |
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Preference number: 5 (lower is better) Translates to: PCPAPYTVLAYMHTSYLLIVYSF*IMCKPL Trigger: CAGGGGTTTACACATGATCAAAAAGGAGTATACAAT...TAGTAGATAACTTGTGTGCATATAAGCTAGAACAGTATAAGGGGCCGGGCATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CAA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTTGCCTAATTGACAAGTaGTTTATGACTGGAGATTCC | + |
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Preference number: 5 (lower is better) Translates to: TKLYRENEEVEIYVEQSLCLIDK*FMTGDS Trigger: GGAATCTCCAGTCATAAACAACTTGTCAATTAGGCA...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS-3UTR CAA 90 bp | ACAAAACTATACCGAGAGAATGAAGAAGTGGAAATATATGTGGAACAGAGCCTTGAAGCTAGTAGAGTCTaGTGTTCTACAAAAAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: TKLYRENEEVEIYVEQSLEASRV*CSTKSR Trigger: TCTACTTTTTGTAGAACACAAGACTCTACTAGCTTC...AAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTCGGTATAGTTTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373316.5 |
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| CDS CCA 72 bp | GTCGACTCTGGTTTCTCTATCCTATGGTTAAACCTCTaGAGCTACGCAGACCGTGGCAGCGATAAATCCACG | + |
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Preference number: 6 (lower is better) Translates to: VDSGFSILWLNL*SYADRGSDKST Trigger: CGTGGATTTATCGCTGCCACGGTCTGCGTAGCTCCAGAGGTTTAACCATAGGATAGAGAAACCAGAGTCGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644362.1 |
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| CDS CCA 72 bp | AGGAACATTGAAGTCGACTCTGGTTTCTCTATCCTATaGTTAAACCTCTGGAGCTACGCAGACCGTGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RNIEVDSGFSIL*LNLWSYADRGS Trigger: GCTGCCACGGTCTGCGTAGCTCCAGAGGTTTAACCATAGGATAGAGAAACCAGAGTCGACTTCAATGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644362.1 |
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| CDS TCA 72 bp | TCATATATTTCCTTAGAAGCTTCAAGGACTGAATCCTaGCAGGAAACAGGCACCTCCAGGATTCTCTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SYISLEASRTES*QETGTSRILSP Trigger: TGGGGAGAGAATCCTGGAGGTGCCTGTTTCCTGTCAGGATTCAGTCCTTGAAGCTTCTAAGGAAATATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477335.5 |
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| CDS CCA 72 bp | TCTGCTATTATCATGGAGAGCTATTTCACATCCACTTaGCATTTGTTTCCTACCTCCATGTTGTTGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: SAIIMESYFTST*HLFPTSMLLST Trigger: GGTGCTCAACAACATGGAGGTAGGAAACAAATGCCAAGTGGATGTGAAATAGCTCTCCATGATAATAGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474281.1 |
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