RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PEX10 (Homo sapiens)

Ensembl gene IDs: ENSG00000157911

Ensembl transcript IDs: ENST00000288774.8, ENST00000447513.7, ENST00000502666.1, ENST00000507596.5, ENST00000508384.5, ENST00000510434.1, ENST00000514502.1, ENST00000515760.1, ENST00000650293.1

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCGGGCCAGCTCCAGGAGCTTCTCACACTGCCTGGCAGCCCCCTaGCCACCGTCCCCAGACTTGGTGTGTGTGGCTGCCCTCAGTCCT +
Preference number: 1 (lower is better)
Translates to: ARASSRSFSHCLAAP*PPSPDLVCVAALSP
Trigger: AGGACTGAGGGCAGCCACACACACCAAGTCTGGGGACGGTGGCCAGGGGGCTGCCAGGCAGTGTGAGAAGCTCCTGGAGCTGGCCCGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502666.1
3UTR TCA 90 bp TCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTaGTGGATGGAGCCACGGCGGCATCTGCCCACCCGGCCGCAGCCC +
Preference number: 1 (lower is better)
Translates to: SHALGQSTVKQRTGC*WMEPRRHLPTRPQP
Trigger: GGGCTGCGGCCGGGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACTGTGCTCTGGCCAAGCGCGTGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR TCA 90 bp GGCCGCGGTGCAGCCTCCACTCCTTCCTGGCTCGCTGCCGCTGCCTaGAACCGTACAGCTGCAGCCCCATGGACAGCACCAGGTGCAGCA +
Preference number: 1 (lower is better)
Translates to: GRGAASTPSWLAAAA*NRTAAAPWTAPGAA
Trigger: TGCTGCACCTGGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTGGAGGCTGCACCGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
3UTR GCA 90 bp GACAGGCCGCGGTGCAGCCTCCACTCCTTCCTGGCTCGCTGCCGCTaGCTGAAACCGTACAGCTGCAGCCCCATGGACAGCACCAGGTGC +
Preference number: 1 (lower is better)
Translates to: DRPRCSLHSFLARCR*LKPYSCSPMDSTRC
Trigger: GCACCTGGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTGGAGGCTGCACCGCGGCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
3UTR GCA 90 bp CGCAGGGCGTGGCTGTTGGGTGCCTGCGCTCCTCCAGGCACAGGGTaGACAGGGGGTTTCTGGAAACGGCTCTCTCCTCCAAGGAGGCCC +
Preference number: 1 (lower is better)
Translates to: RRAWLLGACAPPGTG*TGGFWKRLSPPRRP
Trigger: GGGCCTCCTTGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510434.1
3UTR CCA 90 bp CACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATaGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGTCTG +
Preference number: 1 (lower is better)
Translates to: HQHATAQRGGHMYPR*VHLDDADVLLPQGL
Trigger: CAGACCCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR TCA 90 bp ACCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTaGGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTG +
Preference number: 1 (lower is better)
Translates to: TWKHQMEAGNRLGPS*GAEHSSDRGSAGRL
Trigger: CAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR CCA 90 bp AGCAAGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTaGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTC +
Preference number: 1 (lower is better)
Translates to: SKTWFARVFAGSRSC*PGVLRQQGNVAHAL
Trigger: GAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR TCA 90 bp ATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTaGCATGCGAGTGAAGGCCTCTCCTCCTGGGCCCCGGGCTGCGCA +
Preference number: 1 (lower is better)
Translates to: ILHSRTSQLWSQMRH*HASEGLSSWAPGCA
Trigger: TGCGCAGCCCGGGGCCCAGGAGGAGAGGCCTTCACTCGCATGTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR TCA 90 bp CCCTCAGTCCTGAGGTCCCGTGGGAGCTTCTACCTGCAAGTGTGGTaGGGCCAAAGTAGGCCACATCTGAGAGCAGCTCAACCTCCTTCC +
Preference number: 1 (lower is better)
Translates to: PSVLRSRGSFYLQVW*GQSRPHLRAAQPPS
Trigger: GGAAGGAGGTTGAGCTGCTCTCAGATGTGGCCTACTTTGGCCTCACCACACTTGCAGGTAGAAGCTCCCACGGGACCTCAGGACTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502666.1
3UTR GCA 90 bp AACAGCAAGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTaGTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCC +
Preference number: 1 (lower is better)
Translates to: NSKTWFARVFAGSRS*WPGVLRQQGNVAHA
Trigger: GGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR CCA 90 bp AAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCTGGCCTTGGTTaGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTG +
Preference number: 1 (lower is better)
Translates to: KVCVPNASDGGAGLG*FLSAPCGHQVLGDV
Trigger: CACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCATTTGGCACACACACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR CCA 90 bp ATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCTGGCCTTaGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGA +
Preference number: 1 (lower is better)
Translates to: IEGVCAKCFRRRCWP*LVSLCPVWSSSPGG
Trigger: TCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCATTTGGCACACACACCTTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR CCA 90 bp GAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTaGCACACGCCCTCGAGGCATTTTAACACTGCGCTTCAGGAAATC +
Preference number: 1 (lower is better)
Translates to: EAGPAGQVFYVSREM*HTPSRHFNTALQEI
Trigger: GATTTCCTGAAGCGCAGTGTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR TCA 90 bp CGAAGAATCTCCCACCTGTGCTCATCTCTTGCTCCGGGATTCCCCTaGGCAACTGTTCTAGGGCCTATGAGGGCCACATGGAAAGATGGT +
Preference number: 1 (lower is better)
Translates to: RRISHLCSSLAPGFP*ATVLGPMRATWKDG
Trigger: ACCATCTTTCCATGTGGCCCTCATAGGCCCTAGAACAGTTGCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR CCA 90 bp ACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCTaGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCT +
Preference number: 1 (lower is better)
Translates to: TCIEGVCAKCFRRRC*PWLVSLCPVWSSSP
Trigger: AGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR GCA 90 bp TTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTaGTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGT +
Preference number: 1 (lower is better)
Translates to: LTCIEGVCAKCFRRR*WPWLVSLCPVWSSS
Trigger: ACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR CCA 90 bp AATACAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACATaGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGT +
Preference number: 1 (lower is better)
Translates to: NTGSSSFLSKSNSKT*FARVFAGSRSCWPG
Trigger: ACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGTTTGACTTACTTAGGAATGAGGATGACCCTGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR TCA 90 bp CAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTaGGACACTTGGGATTCTCAGACTGTGGACAGGAGTGTTTGTCAT +
Preference number: 1 (lower is better)
Translates to: QDSQCCSQVVLLVPC*DTWDSQTVDRSVCH
Trigger: ATGACAAACACTCCTGTCCACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR TCA 90 bp GCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTaGCACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTT +
Preference number: 1 (lower is better)
Translates to: AAQAPHSGRCFLSQN*HGECLVSGFSCTSV
Trigger: AACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTGTCAATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR TCA 90 bp GCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTaGCCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATG +
Preference number: 1 (lower is better)
Translates to: AGHRKAHLLFGLFER*PILHSRTSQLWSQM
Trigger: CATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR CCA 90 bp TGTTCTAACTTCTGTGCAAGCAAGGTTAATCCTGAGACTAAATCTTaGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCC +
Preference number: 1 (lower is better)
Translates to: CSNFCASKVNPETKS*RSDSRRGHLCPGPP
Trigger: GGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAACCTTGCTTGCACAGAAGTTAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR GCA 90 bp GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGACCCGCCAGCCTCCGTaGCCCACCCCACCCAGCACG +
Preference number: 2 (lower is better)
Translates to: APCGHQVLGDVLCPAALGTRQPP*PTPPST
Trigger: CGTGCTGGGTGGGGTGGGGCACGGAGGCTGGCGGGT...CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR TCA 90 bp CCAAGGAGGCCCTGCGGTGAGACAGGCCGCGGTGCAGCCTCCACTCCTTCCTGGCTCGCTGCCGCTGCCTaGAACCGTACAGCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: PRRPCGETGRGAASTPSWLAAAA*NRTAAA
Trigger: GGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAG...CCAGGAAGGAGTGGAGGCTGCACCGCGGCCTGTCTCACCGCAGGGCCTCCTTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510434.1
3UTR-3UTR GCA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGACCCGCCAGCCTCCGTaGCCCACCCCACCCAGCACG +
Preference number: 2 (lower is better)
Translates to: PQDLARECVWVRKRPLCATRQPP*PTPPST
Trigger: CGTGCTGGGTGGGGTGGGGCACGGAGGCTGGCGGGT...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR GCA 90 bp AGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACCCGGCCTGGGGGATGTGCTCTaGCCAGCCGCCCTCGGGGAG +
Preference number: 2 (lower is better)
Translates to: SKGLGADGWSHGGICPPGLGDVL*PAALGE
Trigger: CTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAG...GCCGGGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR CCA 90 bp GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGCCTCCCATGGGGCCGTaGGGCTGCTGTTCTCACTGC +
Preference number: 2 (lower is better)
Translates to: APCGHQVLGDVLCPAALGPPMGP*GCCSHC
Trigger: GCAGTGAGAACAGCAGCCCCACGGCCCCATGGGAGG...CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR TCA 90 bp AGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGGGGCTGCCCTCAGTCCTaGGGTCCCGTGGGAGCTTCT +
Preference number: 2 (lower is better)
Translates to: SVTSTPRRSEEGTCIRDGGCPQS*GPVGAS
Trigger: AGAAGCTCCCACGGGACCTCAGGACTGAGGGCAGCC...CCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502666.1
3UTR-3UTR GCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGACCCGCCAGCCTCCGTaGCCCACCCCACCCAGCACG +
Preference number: 2 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLTRQPP*PTPPST
Trigger: CGTGCTGGGTGGGGTGGGGCACGGAGGCTGGCGGGT...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR CCA 90 bp CGAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCACCTCCCATGGGGCCGTaGGGCTGCTGTTCTCACTGC +
Preference number: 2 (lower is better)
Translates to: RAEGLNTAVTVGQQVACPPPMGP*GCCSHC
Trigger: GCAGTGAGAACAGCAGCCCCACGGCCCCATGGGAGG...TGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR CCA 90 bp AGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGGGCTTCTCACACTGCCTaGCAGCCCCCTGGCCACCGT +
Preference number: 2 (lower is better)
Translates to: SVTSTPRRSEEGTCIRDGASHTA*QPPGHR
Trigger: ACGGTGGCCAGGGGGCTGCCAGGCAGTGTGAGAAGC...CCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502666.1
3UTR-3UTR GCA 90 bp CGAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAATGGGGCCGTGGGGCTaGTGTTCTCACTGCACTGGC +
Preference number: 2 (lower is better)
Translates to: RAEGLNTAVTVGQQVACPMGPWG*CSHCTG
Trigger: GCCAGTGCAGTGAGAACAGCAGCCCCACGGCCCCAT...TGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR GCA 90 bp AGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGGAGGAGCTTCTCACACTaGCTGGCAGCCCCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: SVTSTPRRSEEGTCIRDGRSFSH*LAAPWP
Trigger: TGGCCAGGGGGCTGCCAGGCAGTGTGAGAAGCTCCT...CCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502666.1
3UTR-3UTR TCA 90 bp TTCCTGGCTCGCTGCCGCTGCCTGAAACCGTACAGCTGCAGCCCCATGGACAGCGGTGCAGCAGTGAGATaGCCCCCAGCAGCCTGTAGC +
Preference number: 2 (lower is better)
Translates to: FLARCRCLKPYSCSPMDSGAAVR*PPAACS
Trigger: GCTACAGGCTGCTGGGGGTCATCTCACTGCTGCACC...GCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510434.1
3UTR-3UTR TCA 90 bp CCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGGTCCACCTGGATGATGGCTCCGGGATTCCCCTaGGCAACTGTTCTAGGGCCT +
Preference number: 2 (lower is better)
Translates to: PRRSEEGTCIRDGSTWMMAPGFP*ATVLGP
Trigger: AGGCCCTAGAACAGTTGCTCAGGGGAATCCCGGAGC...CATCATCCAGGTGGACCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR CCA 90 bp AGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACCCGGCGTGGTCATCAAGTCCTaGGGGATGTGCTCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: SKGLGADGWSHGGICPPGVVIKS*GMCSAQ
Trigger: CTGGGCAGAGCACATCCCCCAGGACTTGATGACCAC...GCCGGGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR TCA 90 bp AGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTCCAGGACCTGGCTCGTaGGTGCGTCTGGGTCAGGAA +
Preference number: 2 (lower is better)
Translates to: RHGLRGSLPEAGPAGQVFPGPGS*VRLGQE
Trigger: TTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGG...AAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR TCA 90 bp GCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACCAGGACCTGGCTCGTaGGTGCGTCTGGGTCAGGAA +
Preference number: 2 (lower is better)
Translates to: AGSRSCWPGVLRQQGNVAPGPGS*VRLGQE
Trigger: TTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGG...TGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR TCA 90 bp ATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGTCTGGCCTCGCACCTTAGCGTaGGCTGCAGACAGTCTGCGA +
Preference number: 2 (lower is better)
Translates to: IRDGSTWMMLTYSSPRVWPRTLA*AADSLR
Trigger: TCGCAGACTGTCTGCAGCTCACGCTAAGGTGCGAGG...CCAGACCCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR TCA 90 bp CAGGACGGCATGCAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTACCTGCAAGTGTGGTaGGGCCAAAGTAGGCCACAT +
Preference number: 2 (lower is better)
Translates to: QDGMQCHQHATAQRGGHMYLQVW*GQSRPH
Trigger: ATGTGGCCTACTTTGGCCTCACCACACTTGCAGGTA...CATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTGCATGCCGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502666.1
3UTR-3UTR GCA 90 bp CACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGGTCCACGAGCTGCAGACAGTCTaGGAAGAATCTCCCACCTGT +
Preference number: 2 (lower is better)
Translates to: HQHATAQRGGHMYPRWVHELQTV*EESPTC
Trigger: ACAGGTGGGAGATTCTTCGCAGACTGTCTGCAGCTC...GTGGACCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR CCA 90 bp GAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGCCTCCCATGGGGCCGTaGGGCTGCTGTTCTCACTGC +
Preference number: 2 (lower is better)
Translates to: ECVWVRKRPLCASQAEMQPPMGP*GCCSHC
Trigger: GCAGTGAGAACAGCAGCCCCACGGCCCCATGGGAGG...CTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR CCA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCTCTGCCCCGTGTaGTCATCAAGTCCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: PQDLARECVWVRKRPLCASLCPV*SSSPGG
Trigger: TCCCCCAGGACTTGATGACCACACGGGGCAGAGAGA...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR CCA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGGGTGCTGGCCTTGGTTaGTTTCTCTCTGCCCCGTGT +
Preference number: 2 (lower is better)
Translates to: PQDLARECVWVRKRPLCAGAGLG*FLSAPC
Trigger: ACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACC...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR CCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGCATACCCCCAGGACCTaGCTCGTGAGTGCGTCTGGG +
Preference number: 2 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLHTPRT*LVSASG
Trigger: CCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATG...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR CCA 90 bp GTCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTGATGGATAGGCGGGAAATAGGCTaGGGCCGAGCTGAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: VARAWPEHSEAKDWVLMDRREIG*GRAEGL
Trigger: CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCT...ATCCATCAGCACCCAGTCCTTTGCTTCACTGTGCTCTGGCCAAGCGCGTGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR GCA 90 bp GAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGATGGGGCCGTGGGGCTaGTGTTCTCACTGCACTGGC +
Preference number: 2 (lower is better)
Translates to: EAGPAGQVFYVSREMWHTMGPWG*CSHCTG
Trigger: GCCAGTGCAGTGAGAACAGCAGCCCCACGGCCCCAT...CGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp CCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGTCTGGTACCTGTGCTCATCTCTTaGTCCGGGATTCCCCTGAGC +
Preference number: 2 (lower is better)
Translates to: PRWVHLDDADVLLPQGLVPVLIS*SGIPLS
Trigger: GCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGG...TACCAGACCCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR GCA 90 bp ATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGTCTGGCCTGTGCTCATCTCTTaGTCCGGGATTCCCCTGAGC +
Preference number: 2 (lower is better)
Translates to: IRDGSTWMMLTYSSPRVWPVLIS*SGIPLS
Trigger: GCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGG...CCAGACCCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR GCA 90 bp CACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGGTCCACCACCTTAGCGTGAGCTaGAGACAGTCTGCGAAGAAT +
Preference number: 2 (lower is better)
Translates to: HQHATAQRGGHMYPRWVHHLSVS*RQSAKN
Trigger: ATTCTTCGCAGACTGTCTGCAGCTCACGCTAAGGTG...GTGGACCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR CCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTTTCCGACGGAGGTGCTaGCCTTGGTTGGTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRIFRRRC*PWLVSL
Trigger: GAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAA...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR TCA 90 bp GAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGCCTGTGCGTCTCAGGCTaGGATGCAGATTTCTGTTTT +
Preference number: 2 (lower is better)
Translates to: EGLNTAVTVGQQVACPAGLCVSG*DADFCF
Trigger: AAAACAGAAATCTGCATCTCAGCCTGAGACGCACAG...GCCTGCTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR TCA 90 bp CTCAGTCCTGAGGTCCCGTGGGAGCTTCTACCTGCAAGTGTGGTGAGGCCAAAGGCTCCGGGATTCCCCTaGGCAACTGTTCTAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LSPEVPWELLPASVVRPKAPGFP*ATVLGP
Trigger: AGGCCCTAGAACAGTTGCTCAGGGGAATCCCGGAGC...CTTTGGCCTCACCACACTTGCAGGTAGAAGCTCCCACGGGACCTCAGGACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502666.1
3UTR-3UTR TCA 90 bp ACATGTATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGCCTCGCACCTTAGCGTaGGCTGCAGACAGTCTGCGA +
Preference number: 2 (lower is better)
Translates to: TCIRDGSTWMMLTYSSPRPRTLA*AADSLR
Trigger: TCGCAGACTGTCTGCAGCTCACGCTAAGGTGCGAGG...CCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR GCA 90 bp GCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCAGACCTGGCTCGTGAGTaGGTCTGGGTCAGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: AGSRSCWPGVLRQQGNVADLARE*VWVRKR
Trigger: TCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTC...TGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp TCCAGGCACAGGGTGCACAGGGGGTTTCTGGAAACGGCTCTCTCCTCCAAGGAGATGGACAGCACCAGGTaGAGCAGTGAGATGACCCCC +
Preference number: 2 (lower is better)
Translates to: SRHRVHRGFLETALSSKEMDSTR*SSEMTP
Trigger: GGGGGTCATCTCACTGCTGCACCTGGTGCTGTCCAT...CTCCTTGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510434.1
3UTR-3UTR CCA 90 bp CATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTTCTCTCTGCCCCGTGTaGTCATCAAGTCCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: HTPRTWLVSASGSGRDLSSLCPV*SSSPGG
Trigger: TCCCCCAGGACTTGATGACCACACGGGGCAGAGAGA...AGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR CCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGGCTCGTGAGTGCGTCTaGGTCAGGAAGAGACCTCTC +
Preference number: 2 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLARECV*VRKRPL
Trigger: GAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGC...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR CCA 90 bp AGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTGTCAGCAGGGAAATGTaGCACACGCCCTCGAGGCAT +
Preference number: 2 (lower is better)
Translates to: RHGLRGSLPEAGPAGQVFVSREM*HTPSRH
Trigger: ATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGAC...AAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR CCA 90 bp CAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGCCTATGAGGGCCACATaGAAAGATGGTCTGGGGTAT +
Preference number: 2 (lower is better)
Translates to: QCHQHATAQRGGHMYPRWPMRAT*KDGLGY
Trigger: ATACCCCAGACCATCTTTCCATGTGGCCCTCATAGG...CCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR TCA 90 bp CTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCACAAAGGACTGGGTGCTaGTGGATGGAGCCACGGCGG +
Preference number: 2 (lower is better)
Translates to: LTSSSSKRPRSSLCVPDPQRTGC*WMEPRR
Trigger: CCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTG...TGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR TCA 90 bp ATGCAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGAAAAGTAGGCCACATCTaGGAGCAGCTCAACCTCCTT +
Preference number: 2 (lower is better)
Translates to: MQCHQHATAQRGGHMYPRKVGHI*EQLNLL
Trigger: AAGGAGGTTGAGCTGCTCTCAGATGTGGCCTACTTT...TCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR TCA 90 bp TATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGTCTGAGCCTGCAAGTGTGGTaGGGCCAAAGTAGGCCACAT +
Preference number: 2 (lower is better)
Translates to: YPRWVHLDDADVLLPQGLSLQVW*GQSRPH
Trigger: ATGTGGCCTACTTTGGCCTCACCACACTTGCAGGCT...CAGACCCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514502.1
3UTR-3UTR GCA 90 bp TGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACACTGCTGGGGGATGTGCTCTaGCCAGCCGCCCTCGGGGAG +
Preference number: 2 (lower is better)
Translates to: CFTSAGKCGTRPRGILTLLGDVL*PAALGE
Trigger: CTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAG...CAGTGTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTGGTTGGTTTCTCTCTaGCCCGTGTGGTCATCAAGT +
Preference number: 2 (lower is better)
Translates to: PQDLARECVWVRKRPLCAWLVSL*PVWSSS
Trigger: ACTTGATGACCACACGGGGCAGAGAGAAACCAACCA...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR CCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTTCAAACAGCAAGACATaGTTTGCGCGGGTCTTTGCC +
Preference number: 2 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRISNSKT*FARVFA
Trigger: GGCAAAGACCCGCGCAAACCATGTCTTGCTGTTTGA...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR CAA 90 bp GAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCTGGCCTTGGTaGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGT +
Preference number: 2 (lower is better)
Translates to: EGVCAKCFRRRCWPW*VSLCPVWSSSPGGC
Trigger: ACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCATTTGGCACACACACCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR TCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTGACCTTGACGTGTATTaGAGGTGTGTGTGCCAAATG +
Preference number: 2 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRIDLDVY*RCVCQM
Trigger: CATTTGGCACACACACCTTCAATACACGTCAAGGTC...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR TCA 90 bp ATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGTCTGGAAAGTAGGCCACATCTaGGAGCAGCTCAACCTCCTT +
Preference number: 2 (lower is better)
Translates to: IRDGSTWMMLTYSSPRVWKVGHI*EQLNLL
Trigger: AAGGAGGTTGAGCTGCTCTCAGATGTGGCCTACTTT...CCAGACCCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR GCA 90 bp GAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGCACTCATTCAGTCCATTaGCTTAACACAAGCCTGATG +
Preference number: 2 (lower is better)
Translates to: EGLNTAVTVGQQVACPAGTHSVH*LNTSLM
Trigger: CATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGT...GCCTGCTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR GCA 90 bp TGTATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGTCAGAATCTCCCACCTGTaGTCATCTCTTGCTCCGGGA +
Preference number: 2 (lower is better)
Translates to: CIRDGSTWMMLTYSSPRVRISHL*SSLAPG
Trigger: TCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCT...GACCCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR CCA 90 bp TATCTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCTCCCATGGGGCCGTaGGGCTGCTGTTCTCACTGC +
Preference number: 2 (lower is better)
Translates to: YLTSSSSKRPRSSLCVPDPPMGP*GCCSHC
Trigger: GCAGTGAGAACAGCAGCCCCACGGCCCCATGGGAGG...GTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR CCA 90 bp GAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGTTCCGACGGAGGTGCTaGCCTTGGTTGGTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: EAGPAGQVFYVSREMWHTFRRRC*PWLVSL
Trigger: GAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAA...CGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR CCA 90 bp GCGCAGCGAGGAGGGCACATGTATCCGCGATGGGTCCACCTGGATGATGCTGACCCTATGAGGGCCACATaGAAAGATGGTCTGGGGTAT +
Preference number: 2 (lower is better)
Translates to: AQRGGHMYPRWVHLDDADPMRAT*KDGLGY
Trigger: ATACCCCAGACCATCTTTCCATGTGGCCCTCATAGG...GTCAGCATCATCCAGGTGGACCCATCGCGGATACATGTGCCCTCCTCGCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR GCA 90 bp CGAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAACTCATTCAGTCCATTaGCTTAACACAAGCCTGATG +
Preference number: 2 (lower is better)
Translates to: RAEGLNTAVTVGQQVACPTHSVH*LNTSLM
Trigger: CATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGT...TGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR GCA 90 bp TATCTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACATGGGGCCGTGGGGCTaGTGTTCTCACTGCACTGGC +
Preference number: 2 (lower is better)
Translates to: YLTSSSSKRPRSSLCVPDMGPWG*CSHCTG
Trigger: GCCAGTGCAGTGAGAACAGCAGCCCCACGGCCCCAT...GTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp CTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCAGGTGTGTGTGCCAAATaGTTCCGACGGAGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: LTSSSSKRPRSSLCVPDPGVCAK*FRRRCW
Trigger: CCAGCACCTCCGTCGGAAGCATTTGGCACACACACC...TGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp GAGGAGGGCACATGTATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCAGAATCTCCCACCTGTaGTCATCTCTTGCTCCGGGA +
Preference number: 2 (lower is better)
Translates to: EEGTCIRDGSTWMMLTYSRISHL*SSLAPG
Trigger: TCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCT...GGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGTGCCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR GCA 90 bp ACATGTATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGAGCTGCAGACAGTCTaGGAAGAATCTCCCACCTGT +
Preference number: 2 (lower is better)
Translates to: TCIRDGSTWMMLTYSSPRELQTV*EESPTC
Trigger: ACAGGTGGGAGATTCTTCGCAGACTGTCTGCAGCTC...CCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR GCA 90 bp CGAGGAGGGCACATGTATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCGTGGGAGCTTCTACCTaGAAGTGTGGTGAGGCCAAA +
Preference number: 2 (lower is better)
Translates to: RGGHMYPRWVHLDDADVLVGAST*KCGEAK
Trigger: TTTGGCCTCACCACACTTGCAGGTAGAAGCTCCCAC...GAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGTGCCCTCCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502666.1
3UTR-3UTR CCA 90 bp GTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAAAAACCCCCAGGACCTaGCTCGTGAGTGCGTCTGGG +
Preference number: 2 (lower is better)
Translates to: VLLPGGTSGTVLRHLGFSKTPRT*LVSASG
Trigger: CCCAGACGCACTCACGAGCCAGGTCCTGGGGGTTTT...TGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000650293.1
3UTR-3UTR TCA 90 bp GTCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTGATGGATGCCTTAACACAAGCCTaGTGGGGCTGTTTTCTCACA +
Preference number: 2 (lower is better)
Translates to: VARAWPEHSEAKDWVLMDALTQA*WGCFLT
Trigger: TGTGAGAAAACAGCCCCATCAGGCTTGTGTTAAGGC...ATCCATCAGCACCCAGTCCTTTGCTTCACTGTGCTCTGGCCAAGCGCGTGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR TCA 90 bp AGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTAACTGGAAGCGACCTTaGCGTGTATTGAAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: RHGLRGSLPEAGPAGQVFNWKRP*RVLKVC
Trigger: ACACACCTTCAATACACGTCAAGGTCGCTTCCAGTT...AAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp TGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACACTGATGGGGCCGTGGGGCTaGTGTTCTCACTGCACTGGC +
Preference number: 2 (lower is better)
Translates to: CFTSAGKCGTRPRGILTLMGPWG*CSHCTG
Trigger: GCCAGTGCAGTGAGAACAGCAGCCCCACGGCCCCAT...CAGTGTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp CTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCATGCTTCCGACGGAGGTaGTGGCCTTGGTTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: LTSSSSKRPRSSLCVPDPCFRRR*WPWLVS
Trigger: AGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCA...TGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp GTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAGGTGTGTGTGCCAAATaGTTCCGACGGAGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: VLLPGGTSGTVLRHLGFSGVCAK*FRRRCW
Trigger: CCAGCACCTCCGTCGGAAGCATTTGGCACACACACC...TGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR CCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGCCTGAGACTAAATCTTaGCGTTCAGACTCCCGTAGA +
Preference number: 2 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLPETKS*RSDSRR
Trigger: TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGG...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR CCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCCTGAGACTAAATCTTaGCGTTCAGACTCCCGTAGA +
Preference number: 2 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSPETKS*RSDSRR
Trigger: TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGG...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR CCA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCCCTGAGACTAAATCTTaGCGTTCAGACTCCCGTAGA +
Preference number: 2 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSPETKS*RSDSRR
Trigger: TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGG...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR CCA 90 bp GTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCATTCCGACGGAGGTGCTaGCCTTGGTTGGTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: VLLPGGTSGTVLRHLGFSFRRRC*PWLVSL
Trigger: GAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAA...TGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp CTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAGACTGTTGCTTCCGACGGAGGTaGTGGCCTTGGTTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: LPGGTSGTVLRHLGFSDCCFRRR*WPWLVS
Trigger: AGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCA...ACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR GCA 90 bp GACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTGCGCCGGAAGCCGGTCCTaGTGGCCAGGTGTTTTACGT +
Preference number: 2 (lower is better)
Translates to: DTGKPTFCLAFSKGDPYCAGSRS*WPGVLR
Trigger: ACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGC...GCAATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR CCA 90 bp CTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTCCTGAGACTAAATCTTaGCGTTCAGACTCCCGTAGA +
Preference number: 2 (lower is better)
Translates to: LCRKPVLLARCFTSAGKCPETKS*RSDSRR
Trigger: TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGG...ACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR CCA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTGTTAGGGAAATGTTCTaGGTTCAGGCGCCCCTCCCA +
Preference number: 2 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFVREMF*VQAPLP
Trigger: TGGGAGGGGCGCCTGAACCCAGAACATTTCCCTAAC...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR CCA 90 bp TGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACACTGGGTGCTGGCCTTGGTTaGTTTCTCTCTGCCCCGTGT +
Preference number: 2 (lower is better)
Translates to: CFTSAGKCGTRPRGILTLGAGLG*FLSAPC
Trigger: ACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACC...CAGTGTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR TCA 90 bp CTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCAGACCTTGACGTGTATTaGAGGTGTGTGTGCCAAATG +
Preference number: 2 (lower is better)
Translates to: LTSSSSKRPRSSLCVPDPDLDVY*RCVCQM
Trigger: CATTTGGCACACACACCTTCAATACACGTCAAGGTC...TGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR TCA 90 bp TGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTACACTGACATGCGAGTaGAGGCCTCTCCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: WTQESPPFVWPFRKVTHITLTCE*RPLLLG
Trigger: GCCCAGGAGGAGAGGCCTTCACTCGCATGTCAGTGT...AATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR GCA 90 bp CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTAAGTCCTGGGGGATGTaGTCTGCCCAGCCGCCCTCG +
Preference number: 2 (lower is better)
Translates to: LRFRKSQVPSCVSNVPTFKSWGM*SAQPPS
Trigger: CGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTT...AAATGTGGGTACGTTACTAACACAAGATGGAACTTGAGATTTCCTGAAGCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGCGTCTCAGGCTGAGATaGAGATTTCTGTTTTCTAAA +
Preference number: 2 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLRLRLR*RFLFSK
Trigger: TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACG...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR GCA 90 bp TGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTGCCGGAAGCCGGTCCTaGTGGCCAGGTGTTTTACGT +
Preference number: 2 (lower is better)
Translates to: WTQESPPFVWPFRKVTHIAGSRS*WPGVLR
Trigger: ACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGC...AATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR GCA 90 bp AAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCAGTTTTGAAAACCTGGGTGTGTGTGCCAAATaGTTCCGACGGAGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: KMPTVNSLAQVKCSFENLGVCAK*FRRRCW
Trigger: CCAGCACCTCCGTCGGAAGCATTTGGCACACACACC...CAGGTTTTCAAAACTGCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR GCA 90 bp CTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTCTGGCGCAGGTTAAATaGAGTTTTGAAAACCTGGAA +
Preference number: 2 (lower is better)
Translates to: LCRKPVLLARCFTSAGKCLAQVK*SFENLE
Trigger: TTCCAGGTTTTCAAAACTGCATTTAACCTGCGCCAG...ACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR TCA 90 bp CCCCACCCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTTCTGGCCTACTTCTaGATTACTTCTCAACTGTAT +
Preference number: 2 (lower is better)
Translates to: PHPARTHSVHCLNTSLMGLLAYF*ITSQLY
Trigger: ATACAGTTGAGAAGTAATTCAGAAGTAGGCCAGAAG...CCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR TCA 90 bp TGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCTCTCACTGCACTGGCTaGAGCAACCCGCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: CLVSGFSCTSVYISDIELSHCTG*SNPPAS
Trigger: GGAGGCTGGCGGGTTGCTTCAGCCAGTGCAGTGAGA...GAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR TCA 90 bp CTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTAAGCTTGTGTGTCCCTaGCCCAAGATAGCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: LKHGSRWTQESPPFVWPFKLVCP*PKIASA
Trigger: AGCACTGGCTATCTTGGGTCAGGGACACACAAGCTT...AAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR CAA 90 bp CCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTaGGGATTCTCAGACTGTGGACAGGAGTGTTTGTCATTTTTCATA +
Preference number: 2 (lower is better)
Translates to: PVLLPGGTSGTVLRH*GFSDCGQECLSFFI
Trigger: TATGAAAAATGACAAACACTCCTGTCCACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR CCA 90 bp CTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCCCAGGTGGTACTTCTaGTACCGTGTTGAGACACTT +
Preference number: 2 (lower is better)
Translates to: LKHGSRWTQESPPFVWPFPRWYF*YRVETL
Trigger: AAGTGTCTCAACACGGTACCAGAAGTACCACCTGGG...AAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR GCA 90 bp AAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCAGTTTTGAAAACCTGTGGTTGGTTTCTCTCTaGCCCGTGTGGTCATCAAGT +
Preference number: 2 (lower is better)
Translates to: KMPTVNSLAQVKCSFENLWLVSL*PVWSSS
Trigger: ACTTGATGACCACACGGGGCAGAGAGAAACCAACCA...CAGGTTTTCAAAACTGCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR GCA 90 bp CTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAGACTGTCTGGCGCAGGTTAAATaGAGTTTTGAAAACCTGGAA +
Preference number: 2 (lower is better)
Translates to: LPGGTSGTVLRHLGFSDCLAQVK*SFENLE
Trigger: TTCCAGGTTTTCAAAACTGCATTTAACCTGCGCCAG...ACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR CCA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACTCTCTCTGCCCCGTGTaGTCATCAAGTCCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: HGECLVSGFSCTSVYISDSLCPV*SSSPGG
Trigger: TCCCCCAGGACTTGATGACCACACGGGGCAGAGAGA...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp CTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTAAAGGTGACCCATATTaGACAGCAGAACATCACAGC +
Preference number: 2 (lower is better)
Translates to: LKHGSRWTQESPPFVWPFKGDPY*TAEHHS
Trigger: GCTGTGATGTTCTGCTGTGCAATATGGGTCACCTTT...AAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR CCA 90 bp TGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTGGGATTCTCAGACTGTaGACAGGAGTGTTTGTCATT +
Preference number: 2 (lower is better)
Translates to: WTQESPPFVWPFRKVTHIGILRL*TGVFVI
Trigger: AATGACAAACACTCCTGTCCACAGTCTGAGAATCCC...AATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR TCA 90 bp CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTCTGTGCGTCTCAGGCTaGGATGCAGATTTCTGTTTT +
Preference number: 2 (lower is better)
Translates to: LRFRKSQVPSCVSNVPTFLCVSG*DADFCF
Trigger: AAAACAGAAATCTGCATCTCAGCCTGAGACGCACAG...AAATGTGGGTACGTTACTAACACAAGATGGAACTTGAGATTTCCTGAAGCGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACTGGTTGGTTTCTCTCTaGCCCGTGTGGTCATCAAGT +
Preference number: 2 (lower is better)
Translates to: HGECLVSGFSCTSVYISDWLVSL*PVWSSS
Trigger: ACTTGATGACCACACGGGGCAGAGAGAAACCAACCA...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR CCA 90 bp TGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCCCAGGTGGTACTTCTaGTACCGTGTTGAGACACTT +
Preference number: 2 (lower is better)
Translates to: CLVSGFSCTSVYISDIELPRWYF*YRVETL
Trigger: AAGTGTCTCAACACGGTACCAGAAGTACCACCTGGG...GAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR TCA 90 bp TGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTCTTCTGGCCTACTTCTaGATTACTTCTCAACTGTAT +
Preference number: 2 (lower is better)
Translates to: WTQESPPFVWPFRKVTHILLAYF*ITSQLY
Trigger: ATACAGTTGAGAAGTAATTCAGAAGTAGGCCAGAAG...AATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR TCA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACAACTGGAAGCGACCTTaGCGTGTATTGAAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: HGECLVSGFSCTSVYISDNWKRP*RVLKVC
Trigger: ACACACCTTCAATACACGTCAAGGTCGCTTCCAGTT...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR TCA 90 bp TGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTGTGCGTCTCAGGCTaGGATGCAGATTTCTGTTTT +
Preference number: 2 (lower is better)
Translates to: CLVSGFSCTSVYISDIELLCVSG*DADFCF
Trigger: AAAACAGAAATCTGCATCTCAGCCTGAGACGCACAG...GAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR TCA 90 bp CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTCTTCTGGCCTACTTCTaGATTACTTCTCAACTGTAT +
Preference number: 2 (lower is better)
Translates to: LRFRKSQVPSCVSNVPTFLLAYF*ITSQLY
Trigger: ATACAGTTGAGAAGTAATTCAGAAGTAGGCCAGAAG...AAATGTGGGTACGTTACTAACACAAGATGGAACTTGAGATTTCCTGAAGCGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR TCA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACCTTCTGGCCTACTTCTaGATTACTTCTCAACTGTAT +
Preference number: 2 (lower is better)
Translates to: HGECLVSGFSCTSVYISDLLAYF*ITSQLY
Trigger: ATACAGTTGAGAAGTAATTCAGAAGTAGGCCAGAAG...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR GCA 90 bp TGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCGTCTCAGGCTGAGATaGAGATTTCTGTTTTCTAAA +
Preference number: 2 (lower is better)
Translates to: CLVSGFSCTSVYISDIELRLRLR*RFLFSK
Trigger: TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACG...GAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR GCA 72 bp GGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTaGCCACCCGGCCGCAGCCCCCAGTGCCTCTCCTGG +
Preference number: 3 (lower is better)
Translates to: GLGADGWSHGGI*PPGRSPQCLSW
Trigger: CCAGGAGAGGCACTGGGGGCTGCGGCCGGGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR GCA 72 bp AGGCCGCGGTGCAGCCTCCACTCCTTCCTGGCTCGCTaGCGCTGCCTGAAACCGTACAGCTGCAGCCCCATG +
Preference number: 3 (lower is better)
Translates to: RPRCSLHSFLAR*RCLKPYSCSPM
Trigger: CATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTGGAGGCTGCACCGCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
3UTR GCA 72 bp CGGTGCAGCCTCCACTCCTTCCTGGCTCGCTGCCGCTaGCTGAAACCGTACAGCTGCAGCCCCATGGACAGC +
Preference number: 3 (lower is better)
Translates to: RCSLHSFLARCR*LKPYSCSPMDS
Trigger: GCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTGGAGGCTGCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
3UTR TCA 72 bp GCAGCCTCCACTCCTTCCTGGCTCGCTGCCGCTGCCTaGAACCGTACAGCTGCAGCCCCATGGACAGCACCA +
Preference number: 3 (lower is better)
Translates to: AASTPSWLAAAA*NRTAAAPWTAP
Trigger: TGGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTGGAGGCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
3UTR CCA 72 bp GCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATaGGTCCACCTGGATGATGCTGACGTACTCCTCCCC +
Preference number: 3 (lower is better)
Translates to: ATAQRGGHMYPR*VHLDDADVLLP
Trigger: GGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR CCA 72 bp TGCGCTCCTCCAGGCACAGGGTGCACAGGGGGTTTCTaGAAACGGCTCTCTCCTCCAAGGAGGCCCTGCGGT +
Preference number: 3 (lower is better)
Translates to: CAPPGTGCTGGF*KRLSPPRRPCG
Trigger: ACCGCAGGGCCTCCTTGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGGAGCGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510434.1
3UTR TCA 72 bp CTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTaGTGGATGGAGCCACGGCGGCATCTGCCCACCCGG +
Preference number: 3 (lower is better)
Translates to: LGQSTVKQRTGC*WMEPRRHLPTR
Trigger: CCGGGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACTGTGCTCTGGCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR TCA 72 bp CAGCTGCAGCCCCATGGACAGCACCAGGTGCAGCAGTaGGATGACCCCCAGCAGCCTGTAGCTAACACGGGC +
Preference number: 3 (lower is better)
Translates to: QLQPHGQHQVQQ*DDPQQPVANTG
Trigger: GCCCGTGTTAGCTACAGGCTGCTGGGGGTCATCTCACTGCTGCACCTGGTGCTGTCCATGGGGCTGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510434.1
3UTR GCA 72 bp TGGCTGTTGGGTGCCTGCGCTCCTCCAGGCACAGGGTaGACAGGGGGTTTCTGGAAACGGCTCTCTCCTCCA +
Preference number: 3 (lower is better)
Translates to: WLLGACAPPGTG*TGGFWKRLSPP
Trigger: TGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGGAGCGCAGGCACCCAACAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510434.1
3UTR CCA 72 bp CCCCCATACCCCCAGGACCTGGCTCGTGAGTGCGTCTaGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCT +
Preference number: 3 (lower is better)
Translates to: PPYPQDLARECV*VRKRPLCASQA
Trigger: AGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR CAA 90 bp AGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGGACCTGTGCTCATCTCTaGCTCCGGGATTCCCCTGAG +
Preference number: 3 (lower is better)
Translates to: SVTSTPRRSEEGTCIRDGTCAHL*LRDSPE
Trigger: CTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGT...CCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR CCA 72 bp AGCGAGGAGGGCACATGTATCCGCGATGGGTCCACCTaGATGATGCTGACGTACTCCTCCCCCAGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: SEEGTCIRDGST*MMLTYSSPRVW
Trigger: CCAGACCCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGTGCCCTCCTCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR-3UTR CAA 90 bp GCGCAGCGAGGAGGGCACATGTATCCGCGATGGGTCCACCTGGATGATGCTGACACCTGTGCTCATCTCTaGCTCCGGGATTCCCCTGAG +
Preference number: 3 (lower is better)
Translates to: AQRGGHMYPRWVHLDDADTCAHL*LRDSPE
Trigger: CTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGT...GTCAGCATCATCCAGGTGGACCCATCGCGGATACATGTGCCCTCCTCGCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR CCA 72 bp GCTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTaGGTTCAGGCGCCCCTCCCAGGGCTGAGAAAGCGC +
Preference number: 3 (lower is better)
Translates to: AESYQVGVREMF*VQAPLPGLRKR
Trigger: GCGCTTTCTCAGCCCTGGGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR CCA 72 bp AGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTaGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: RCWPWLVSLCPV*SSSPGGCALPS
Trigger: GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR CAA 90 bp AGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACCCGGCCTGAGTCCTACCAGGTaGGGGTTAGGGAAATGTTCT +
Preference number: 3 (lower is better)
Translates to: SKGLGADGWSHGGICPPGLSPTR*GLGKCS
Trigger: AGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG...GCCGGGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR CAA 90 bp GAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGCAAACTGGAAGCGACCTaGACGTGTATTGAAGGTGTG +
Preference number: 3 (lower is better)
Translates to: EGLNTAVTVGQQVACPAGKLEAT*TCIEGV
Trigger: CACACCTTCAATACACGTCAAGGTCGCTTCCAGTTT...GCCTGCTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR CCA 72 bp TGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTaGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCA +
Preference number: 3 (lower is better)
Translates to: WFARVFAGSRSC*PGVLRQQGNVA
Trigger: TGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR TCA 72 bp TCCCACCTGTGCTCATCTCTTGCTCCGGGATTCCCCTaGGCAACTGTTCTAGGGCCTATGAGGGCCACATGG +
Preference number: 3 (lower is better)
Translates to: SHLCSSLAPGFP*ATVLGPMRATW
Trigger: CCATGTGGCCCTCATAGGCCCTAGAACAGTTGCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR GCA 72 bp ACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTaGTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTG +
Preference number: 3 (lower is better)
Translates to: TWFARVFAGSRS*WPGVLRQQGNV
Trigger: CACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR CCA 72 bp GTGCCAAATGCTTCCGACGGAGGTGCTGGCCTTGGTTaGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTG +
Preference number: 3 (lower is better)
Translates to: VPNASDGGAGLG*FLSAPCGHQVL
Trigger: CAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCATTTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR CCA 72 bp GAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCTaGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCA +
Preference number: 3 (lower is better)
Translates to: EGVCAKCFRRRC*PWLVSLCPVWS
Trigger: TGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCATTTGGCACACACACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR CCA 72 bp TTTGAAAACCCCCAGGACCTGGCTCGTGAGTGCGTCTaGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCT +
Preference number: 3 (lower is better)
Translates to: FENPQDLARECV*VRKRPLCASQA
Trigger: AGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTTTTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650293.1
3UTR-3UTR CAA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCTGAGTCCTACCAGGTaGGGGTTAGGGAAATGTTCT +
Preference number: 3 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSLSPTR*GLGKCS
Trigger: AGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR TCA 72 bp CTGAGGTCCCGTGGGAGCTTCTACCTGCAAGTGTGGTaGGGCCAAAGTAGGCCACATCTGAGAGCAGCTCAA +
Preference number: 3 (lower is better)
Translates to: LRSRGSFYLQVW*GQSRPHLRAAQ
Trigger: TTGAGCTGCTCTCAGATGTGGCCTACTTTGGCCTCACCACACTTGCAGGTAGAAGCTCCCACGGGACCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502666.1
3UTR GCA 72 bp ATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTaGTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGG +
Preference number: 3 (lower is better)
Translates to: IEGVCAKCFRRR*WPWLVSLCPVW
Trigger: CCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCATTTGGCACACACACCTTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR GCA 72 bp CAGTCTGCGAAGAATCTCCCACCTGTGCTCATCTCTTaGTCCGGGATTCCCCTGAGCAACTGTTCTAGGGCC +
Preference number: 3 (lower is better)
Translates to: QSAKNLPPVLIS*SGIPLSNCSRA
Trigger: GGCCCTAGAACAGTTGCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCTTCGCAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
3UTR CCA 72 bp AAACCTGGAAACATCAAATGGAGGCGGGAAATAGGCTaGGGCCGAGCTGAGGGGCTGAACACAGCAGTGACC +
Preference number: 3 (lower is better)
Translates to: KPGNIKWRREIG*GRAEGLNTAVT
Trigger: GGTCACTGCTGTGTTCAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR-3UTR CAA 90 bp GTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGACTGAGTCCTACCAGGTaGGGGTTAGGGAAATGTTCT +
Preference number: 3 (lower is better)
Translates to: VLLARCFTSAGKCGTRPRLSPTR*GLGKCS
Trigger: AGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG...TCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR CAA 90 bp GAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGCTGAGTCCTACCAGGTaGGGGTTAGGGAAATGTTCT +
Preference number: 3 (lower is better)
Translates to: ECVWVRKRPLCASQAEMQLSPTR*GLGKCS
Trigger: AGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG...CTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR CAA 90 bp CTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAGACTGTACGGAGGTGCTGGCCTaGGTTGGTTTCTCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: LPGGTSGTVLRHLGFSDCTEVLA*VGFSLP
Trigger: GGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGT...ACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR-3UTR CAA 90 bp AGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTAAACTGGAAGCGACCTaGACGTGTATTGAAGGTGTG +
Preference number: 3 (lower is better)
Translates to: RHGLRGSLPEAGPAGQVFKLEAT*TCIEGV
Trigger: CACACCTTCAATACACGTCAAGGTCGCTTCCAGTTT...AAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR CCA 72 bp CCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTaGCACACGCCCTCGAGGCATTTTAACACTGCGCTT +
Preference number: 3 (lower is better)
Translates to: PAGQVFYVSREM*HTPSRHFNTAL
Trigger: AAGCGCAGTGTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR TCA 72 bp CAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTaGGACACTTGGGATTCTCAGACTGTGGACAGGAGT +
Preference number: 3 (lower is better)
Translates to: QCCSQVVLLVPC*DTWDSQTVDRS
Trigger: ACTCCTGTCCACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR CCA 72 bp TCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACATaGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGC +
Preference number: 3 (lower is better)
Translates to: SSSFLSKSNSKT*FARVFAGSRSC
Trigger: GCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGTTTGACTTACTTAGGAATGAGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR-3UTR CAA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACGGTTTGCGCGGGTCTTaGCCGGAAGCCGGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: HGECLVSGFSCTSVYISDGLRGS*PEAGPA
Trigger: AGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACC...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR TCA 72 bp CTGTTTTCTAAAACTGGAAGCGACCTTGACGTGTATTaGAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTG +
Preference number: 3 (lower is better)
Translates to: LFSKTGSDLDVY*RCVCQMLPTEV
Trigger: CACCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAGTTTTAGAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR TCA 72 bp AGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTaGCCCATATTGCACAGCAGAACATCACAGCTGTGG +
Preference number: 3 (lower is better)
Translates to: RKAHLLFGLFER*PILHSRTSQLW
Trigger: CCACAGCTGTGATGTTCTGCTGTGCAATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR CCA 72 bp ACTCTCTGGCGCAGGTTAAATGCAGTTTTGAAAACCTaGAAACATCAAATGGAGGCGGGAAATAGGCTGGGG +
Preference number: 3 (lower is better)
Translates to: TLWRRLNAVLKT*KHQMEAGNRLG
Trigger: CCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGGTTTTCAAAACTGCATTTAACCTGCGCCAGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
3UTR CCA 72 bp TTCTGTGCAAGCAAGGTTAATCCTGAGACTAAATCTTaGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCA +
Preference number: 3 (lower is better)
Translates to: FCASKVNPETKS*RSDSRRGHLCP
Trigger: TGGACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAACCTTGCTTGCACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
3UTR-3UTR CAA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACACCGTGTTGAGACACTaGGGATTCTCAGACTGTGGA +
Preference number: 3 (lower is better)
Translates to: HGECLVSGFSCTSVYISDTVLRH*GFSDCG
Trigger: TCCACAGTCTGAGAATCCCAAGTGTCTCAACACGGT...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR TCA 72 bp AGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTaGCATCGAGCTCCTCTAAGAGGCCACGTTCAAGCT +
Preference number: 3 (lower is better)
Translates to: SVWIFLYQCLHI*HRAPLRGHVQA
Trigger: AGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR TCA 72 bp CAATATAAACGAATAAAGTGTCTTCTGGCCTACTTCTaGATTACTTCTCAACTGTATGGTTTGGGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: QYKRIKCLLAYF*ITSQLYGLGKG
Trigger: TCCCTTCCCCAAACCATACAGTTGAGAAGTAATTCAGAAGTAGGCCAGAAGACACTTTATTCGTTTATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp GGCCCTGCGGTGAGACAGGCCGCGGTGCAGCCTCCACTCCTTCCTGGCTCGCTGAGGGTGGCCGTGTGGTaGCGCATCCAGCGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: GPAVRQAAVQPPLLPGSLRVAVW*RIQRRA
Trigger: GGCGCGGCGCTGGATGCGTCACCACACGGCCACCCT...CAGCGAGCCAGGAAGGAGTGGAGGCTGCACCGCGGCCTGTCTCACCGCAGGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR TCA 90 bp GGCCCTGCGGTGAGACAGGCCGCGGTGCAGCCTCCACTCCTTCCTGGCTCGCTGAAGGAGGCCCTGCGGTaGGACAGGCCGCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GPAVRQAAVQPPLLPGSLKEALR*DRPRCS
Trigger: GCTGCACCGCGGCCTGTCTCACCGCAGGGCCTCCTT...CAGCGAGCCAGGAAGGAGTGGAGGCTGCACCGCGGCCTGTCTCACCGCAGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR TCA 90 bp GAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGCAGGGTGGCCGTGTGGTaGCGCATCCAGCGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: EGLNTAVTVGQQVACPAGRVAVW*RIQRRA
Trigger: GGCGCGGCGCTGGATGCGTCACCACACGGCCACCCT...GCCTGCTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR GCA 90 bp GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGCTGGGGGATGTGCTCTaGCCAGCCGCCCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: APCGHQVLGDVLCPAALGLGDVL*PAALGE
Trigger: CTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAG...CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGAAGGAGGCCCTGCGGTaGGACAGGCCGCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRKEALR*DRPRCS
Trigger: GCTGCACCGCGGCCTGTCTCACCGCAGGGCCTCCTT...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp GAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGCGGCCCCAGGCTCCCCTaGAAGGGTCGCCCACTGTCG +
Preference number: 4 (lower is better)
Translates to: EGLNTAVTVGQQVACPAGGPRLP*KGRPLS
Trigger: CGACAGTGGGCGACCCTTGCAGGGGAGCCTGGGGCC...GCCTGCTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR GCA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGACTGGGGGATGTGCTCTaGCCAGCCGCCCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGLGDVL*PAALGE
Trigger: CTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAG...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp GTGAGACAGGCCGCGGTGCAGCCTCCACTCCTTCCTGGCTCGCTGCCGCTGCCTCCTCTCCGGGCAGGCTaGGGACACGGAGGTGATCCC +
Preference number: 4 (lower is better)
Translates to: VRQAAVQPPLLPGSLPLPPLRAG*GHGGDP
Trigger: GGGATCACCTCCGTGTCCGCAGCCTGCCCGGAGAGG...AGGCAGCGGCAGCGAGCCAGGAAGGAGTGGAGGCTGCACCGCGGCCTGTCTCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR TCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGAGGCGAGGCCCTGTCTaGGGACGAAGACCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRRRGPV*GRRPPA
Trigger: TGCGGGCGGTCTTCGTCCTCAGACAGGGCCTCGCCT...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CAGGACGGCATGCAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGCTGTCGGGGTCAGCCTaGAGCTCCTGCTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QDGMQCHQHATAQRGGHMLSGSA*SSCSRG
Trigger: CCCCCTGGAGCAGGAGCTGCAGGCTGACCCCGACAG...CATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTGCATGCCGTCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502666.1
CDS-3UTR GCA 90 bp TGCGGTGAGACAGGCCGCGGTGCAGCCTCCACTCCTTCCTGGCTCGCTGCCGCTAGCAGCGCCCTCCTCTaGTGCTCAGTCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CGETGRGAASTPSWLAAASSALL*CSVRVA
Trigger: GGCCACCCTGACTGAGCAGCAGAGGAGGGCGCTGCT...AGCGGCAGCGAGCCAGGAAGGAGTGGAGGCTGCACCGCGGCCTGTCTCACCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR GCA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGACCTCCAAGGAGGCCCTaGGGTGAGACAGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGPPRRP*GETGRG
Trigger: ACCGCGGCCTGTCTCACCGCAGGGCCTCCTTGGAGG...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp AGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACCCGGCGGTGGCCGCAGGGCGTaGCTGTTGGGTGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: SKGLGADGWSHGGICPPGGGRRA*LLGACA
Trigger: AGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACC...GCCGGGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp GCAGGTAGGGCAGGACGGCATGCAGTGTCACCAGCACGCCACGGCGCAGCGAGGGCTTCTCACACTGCCTaGCAGCCCCCTGGCCACCGT +
Preference number: 4 (lower is better)
Translates to: AGRAGRHAVSPARHGAARASHTA*QPPGHR
Trigger: ACGGTGGCCAGGGGGCTGCCAGGCAGTGTGAGAAGC...CCTCGCTGCGCCGTGGCGTGCTGGTGACACTGCATGCCGTCCTGCCCTACCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502666.1
CDS-3UTR TCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTAAGGAGGCCCTGCGGTaGGACAGGCCGCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRIKEALR*DRPRCS
Trigger: GCTGCACCGCGGCCTGTCTCACCGCAGGGCCTCCTT...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGAAGGAGGCCCTGCGGTaGGACAGGCCGCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PQDLARECVWVRKRPLCAKEALR*DRPRCS
Trigger: GCTGCACCGCGGCCTGTCTCACCGCAGGGCCTCCTT...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGCTGGCTCGCTGCCGCTaGCTGAAACCGTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: APCGHQVLGDVLCPAALGLARCR*LKPYSC
Trigger: GCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAG...CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp AGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACCCGGCCCTCCAAGGAGGCCCTaGGGTGAGACAGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: SKGLGADGWSHGGICPPGPPRRP*GETGRG
Trigger: ACCGCGGCCTGTCTCACCGCAGGGCCTCCTTGGAGG...GCCGGGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR GCA 90 bp CTGGCTCGCTGCCGCTGCCTGAAACCGTACAGCTGCAGCCCCATGGACAGCACCCCTCCAAGGAGGCCCTaGGGTGAGACAGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: LARCRCLKPYSCSPMDSTPPRRP*GETGRG
Trigger: ACCGCGGCCTGTCTCACCGCAGGGCCTCCTTGGAGG...GGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR GCA 90 bp CGAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGGCGTGGCTGTTGGGTaGCTGCGCTCCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RAEGLNTAVTVGQQVACPGVAVG*LRSSRH
Trigger: GTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCC...TGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR GCA 90 bp GAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGCAAGTCCTGGGGGATGTaGTCTGCCCAGCCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: EGLNTAVTVGQQVACPAGKSWGM*SAQPPS
Trigger: CGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTT...GCCTGCTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp CGAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGGCGTGGCTGTTaGGTGCCTGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RAEGLNTAVTVGQQVACPAGRGC*VPALLQ
Trigger: CTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGC...TGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp GCGGTGCAGCCTCCACTCCTTCCTGGCTCGCTGCCGCTGCCTGAAACCGTACAGGCAGGGCGTGGCTGTTaGGTGCCTGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AVQPPLLPGSLPLPETVQAGRGC*VPALLQ
Trigger: CTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGC...CTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTGGAGGCTGCACCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR CCA 90 bp CGCTCCTCCAGGCACAGGGTGCACAGGGGGTTTCTGGAAACGGCTCTCTCCTCCGGTGGCCGCAGGGCGTaGCTGTTGGGTGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: RSSRHRVHRGFLETALSSGGRRA*LLGACA
Trigger: AGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACC...GGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGGAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR CCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTGGTGGCCGCAGGGCGTaGCTGTTGGGTGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRIGGRRA*LLGACA
Trigger: AGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACC...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGCATACCCCCAGGACCTaGCTCGTGAGTGCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: APCGHQVLGDVLCPAALGHTPRT*LVSASG
Trigger: CCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATG...CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR TCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGAGGGTGGCCGTGTGGTaGCGCATCCAGCGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLRVAVW*RIQRRA
Trigger: GGCGCGGCGCTGGATGCGTCACCACACGGCCACCCT...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR TCA 90 bp AGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTAGGGTGGCCGTGTGGTaGCGCATCCAGCGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: RHGLRGSLPEAGPAGQVFRVAVW*RIQRRA
Trigger: GGCGCGGCGCTGGATGCGTCACCACACGGCCACCCT...AAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp GGTGCACAGGGGGTTTCTGGAAACGGCTCTCTCCTCCAAGGAGGCCCTGCGGTGAGGCGAGGCCCTGTCTaGGGACGAAGACCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GAQGVSGNGSLLQGGPAVRRGPV*GRRPPA
Trigger: TGCGGGCGGTCTTCGTCCTCAGACAGGGCCTCGCCT...CACCGCAGGGCCTCCTTGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR TCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGGGTGCAGCAGTGAGATaGCCCCCAGCAGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRGAAVR*PPAACS
Trigger: GCTACAGGCTGCTGGGGGTCATCTCACTGCTGCACC...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp TGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAGCCTCGCTGCCGCTGCCTaGAACCGTACAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CGHQVLGDVLCPAALGESLAAAA*NRTAAA
Trigger: GGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAG...GCTCTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGATCTCACTGCACTGGCTaGAGCAACCCGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGSHCTG*SNPPAS
Trigger: GGAGGCTGGCGGGTTGCTTCAGCCAGTGCAGTGAGA...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CGAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAAGGCTGGGGCCGAGCTaGGGGGCTGAACACAGCAGT +
Preference number: 4 (lower is better)
Translates to: RAEGLNTAVTVGQQVACPRLGPS*GAEHSS
Trigger: ACTGCTGTGTTCAGCCCCTCAGCTCGGCCCCAGCCT...TGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR GCA 90 bp GCGCAGCGAGGAGGGCACATGTATCCGCGATGGGTCCACCTGGATGATGCTGACGGCCCCAGGCTCCCCTaGAAGGGTCGCCCACTGTCG +
Preference number: 4 (lower is better)
Translates to: AQRGGHMYPRWVHLDDADGPRLP*KGRPLS
Trigger: CGACAGTGGGCGACCCTTGCAGGGGAGCCTGGGGCC...GTCAGCATCATCCAGGTGGACCCATCGCGGATACATGTGCCCTCCTCGCTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502666.1
CDS-3UTR GCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGCTGGCTCGCTGCCGCTaGCTGAAACCGTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRLARCR*LKPYSC
Trigger: GCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAG...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp TGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAGCTGGCTGTTGGGTGCCTaGGCTCCTCCAGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: CGHQVLGDVLCPAALGESWLLGA*APPGTG
Trigger: CCCTGTGCCTGGAGGAGCGCAGGCACCCAACAGCCA...GCTCTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp AGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTACCCGCCAGCCTCCGTaGCCCACCCCACCCAGCACG +
Preference number: 4 (lower is better)
Translates to: RHGLRGSLPEAGPAGQVFTRQPP*PTPPST
Trigger: CGTGCTGGGTGGGGTGGGGCACGGAGGCTGGCGGGT...AAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTACCCGCCAGCCTCCGTaGCCCACCCCACCCAGCACG +
Preference number: 4 (lower is better)
Translates to: HTPRTWLVSASGSGRDLSTRQPP*PTPPST
Trigger: CGTGCTGGGTGGGGTGGGGCACGGAGGCTGGCGGGT...AGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR TCA 90 bp GCGGTGCAGCCTCCACTCCTTCCTGGCTCGCTGCCGCTGCCTGAAACCGTACAGCACCAGGTGCAGCAGTaGGATGACCCCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AVQPPLLPGSLPLPETVQHQVQQ*DDPQQP
Trigger: AGGCTGCTGGGGGTCATCTCACTGCTGCACCTGGTG...CTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTGGAGGCTGCACCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR TCA 90 bp CCACTCCTTCCTGGCTCGCTGCCGCTGCCTGAAACCGTACAGCTGCAGCCCCATCTCGCTGCCGCTGCCTaGAACCGTACAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PLLPGSLPLPETVQLQPHLAAAA*NRTAAA
Trigger: GGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAG...ATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR TCA 90 bp TGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAGCTCTCACTGCACTGGCTaGAGCAACCCGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: CGHQVLGDVLCPAALGESSHCTG*SNPPAS
Trigger: GGAGGCTGGCGGGTTGCTTCAGCCAGTGCAGTGAGA...GCTCTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTAGGCTGGGGCCGAGCTaGGGGGCTGAACACAGCAGT +
Preference number: 4 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRIRLGPS*GAEHSS
Trigger: ACTGCTGTGTTCAGCCCCTCAGCTCGGCCCCAGCCT...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGACACTGACATGCGAGTaGAGGCCTCTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRTLTCE*RPLLLG
Trigger: GCCCAGGAGGAGAGGCCTTCACTCGCATGTCAGTGT...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CGCTGCCTGAAACCGTACAGCTGCAGCCCCATGGACAGCACCAGGTGCAGCAGTCTGTCGGGGTCAGCCTaGAGCTCCTGCTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RCLKPYSCSPMDSTRCSSLSGSA*SSCSRG
Trigger: CCCCCTGGAGCAGGAGCTGCAGGCTGACCCCGACAG...ACTGCTGCACCTGGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR GCA 90 bp CTCCTCCAGGCACAGGGTGCACAGGGGGTTTCTGGAAACGGCTCTCTCCTCCAAGGCCCCAGGCTCCCCTaGAAGGGTCGCCCACTGTCG +
Preference number: 4 (lower is better)
Translates to: LLQAQGAQGVSGNGSLLQGPRLP*KGRPLS
Trigger: CGACAGTGGGCGACCCTTGCAGGGGAGCCTGGGGCC...TTGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR GCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTAGCAGCGCCCTCCTCTaGTGCTCAGTCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRISSALL*CSVRVA
Trigger: GGCCACCCTGACTGAGCAGCAGAGGAGGGCGCTGCT...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGATGGACAGCACCAGGTaGAGCAGTGAGATGACCCCC +
Preference number: 4 (lower is better)
Translates to: APCGHQVLGDVLCPAALGMDSTR*SSEMTP
Trigger: GGGGGTCATCTCACTGCTGCACCTGGTGCTGTCCAT...CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTGGCTGTTGGGTGCCTaGGCTCCTCCAGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: PQDLARECVWVRKRPLCAWLLGA*APPGTG
Trigger: CCCTGTGCCTGGAGGAGCGCAGGCACCCAACAGCCA...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CGCTCCTCCAGGCACAGGGTGCACAGGGGGTTTCTGGAAACGGCTCTCTCCTCCTGGCTGTTGGGTGCCTaGGCTCCTCCAGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: RSSRHRVHRGFLETALSSWLLGA*APPGTG
Trigger: CCCTGTGCCTGGAGGAGCGCAGGCACCCAACAGCCA...GGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGGAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR GCA 90 bp GCATGCAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCAGGAGCTTCTCACACTaGCTGGCAGCCCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ACSVTSTPRRSEEGTCIRRSFSH*LAAPWP
Trigger: TGGCCAGGGGGCTGCCAGGCAGTGTGAGAAGCTCCT...GCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTGCATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502666.1
CDS-3UTR CCA 90 bp AGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACCCGGCGCAACATGTAGCCGCTaGAGGCAGGCGAGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SKGLGADGWSHGGICPPGATCSR*RQARPC
Trigger: ACAGGGCCTCGCCTGCCTCCAGCGGCTACATGTTGC...GCCGGGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp CTGGCTCGCTGCCGCTGCCTGAAACCGTACAGCTGCAGCCCCATGGACAGCACCGCAACATGTAGCCGCTaGAGGCAGGCGAGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LARCRCLKPYSCSPMDSTATCSR*RQARPC
Trigger: ACAGGGCCTCGCCTGCCTCCAGCGGCTACATGTTGC...GGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR CCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCGGTGGCCGCAGGGCGTaGCTGTTGGGTGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSGGRRA*LLGACA
Trigger: AGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACC...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp GTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGAAGGCCTCTCCTCCTaGGCCCCGGGCTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: VLLARCFTSAGKCGTRPREGLSS*APGCAG
Trigger: GCCTGCGCAGCCCGGGGCCCAGGAGGAGAGGCCTTC...TCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CACTGCCTGGCAGCCCCCTGGCCACCGTCCCCAGACTTGGTGTGTGTGGCTGCCCAGACTTGGTGTGTGTaGCTGCCCTCAGTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: HCLAAPWPPSPDLVCVAAQTWCV*LPSVLR
Trigger: CCTCAGGACTGAGGGCAGCCACACACACCAAGTCTG...GGCAGCCACACACACCAAGTCTGGGGACGGTGGCCAGGGGGCTGCCAGGCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502666.1
CDS-3UTR TCA 90 bp CCCCACCCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGAGGGTGGCCGTGTGGTaGCGCATCCAGCGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: PHPARTHSVHCLNTSLMGRVAVW*RIQRRA
Trigger: GGCGCGGCGCTGGATGCGTCACCACACGGCCACCCT...CCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CGAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCATGCTGCACCACGCGGTaGTGCACTCCCAGCAGAACA +
Preference number: 4 (lower is better)
Translates to: RAEGLNTAVTVGQQVACPCCTTR*CTPSRT
Trigger: TGTTCTGCTGGGAGTGCATCACCGCGTGGTGCAGCA...TGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR TCA 90 bp TGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAGCTGCTGCACCACGCGGTaGTGCACTCCCAGCAGAACA +
Preference number: 4 (lower is better)
Translates to: CGHQVLGDVLCPAALGESCCTTR*CTPSRT
Trigger: TGTTCTGCTGGGAGTGCATCACCGCGTGGTGCAGCA...GCTCTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGAGTGCCGAAGGTAGATaGGCTTCTGGGGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: APCGHQVLGDVLCPAALGSAEGR*ASGEGT
Trigger: AGTTCCCTCCCCAGAAGCTCATCTACCTTCGGCACT...CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGGCTCCGGGATTCCCCTaGGCAACTGTTCTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QCHQHATAQRGGHMYPRWAPGFP*ATVLGP
Trigger: AGGCCCTAGAACAGTTGCTCAGGGGAATCCCGGAGC...CCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR TCA 90 bp CAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGCCTCGCACCTTAGCGTaGGCTGCAGACAGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: QCHQHATAQRGGHMYPRWPRTLA*AADSLR
Trigger: TCGCAGACTGTCTGCAGCTCACGCTAAGGTGCGAGG...CCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR GCA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCGGCCCCAGGCTCCCCTaGAAGGGTCGCCCACTGTCG +
Preference number: 4 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSGPRLP*KGRPLS
Trigger: CGACAGTGGGCGACCCTTGCAGGGGAGCCTGGGGCC...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CGCTGCCTGAAACCGTACAGCTGCAGCCCCATGGACAGCACCAGGTGCAGCAGTAGCGCCCTCCTCTGCTaGTCAGTCAGGGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RCLKPYSCSPMDSTRCSSSALLC*SVRVAV
Trigger: CACGGCCACCCTGACTGAGCAGCAGAGGAGGGCGCT...ACTGCTGCACCTGGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR GCA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGACTGAAACCGTACAGCTaGAGCCCCATGGACAGCACC +
Preference number: 4 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGLKPYS*SPMDST
Trigger: GGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAG...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp AGAACAGGTGGCCGCAGGGCGTGGCTGTTGGGTGCCTGCGCTCCTCCAGGCACACTGAAACCGTACAGCTaGAGCCCCATGGACAGCACC +
Preference number: 4 (lower is better)
Translates to: RTGGRRAWLLGACAPPGTLKPYS*SPMDST
Trigger: GGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAG...TGTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACCTGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR GCA 90 bp CTTCCTGGCTCGCTGCCGCTGCCTGAAACCGTACAGCTGCAGCCCCATGGACAGCTGGCTCGCTGCCGCTaGCTGAAACCGTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPGSLPLPETVQLQPHGQLARCR*LKPYSC
Trigger: GCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAG...CTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR GCA 90 bp GAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGCCCTCCAGGCACAGGGTaGACAGGGGGTTTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: EGLNTAVTVGQQVACPAGPPGTG*TGGFWK
Trigger: TTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGG...GCCTGCTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR GCA 90 bp TCCAGGCACAGGGTGCACAGGGGGTTTCTGGAAACGGCTCTCTCCTCCAAGGAGGGCGTGGCTGTTGGGTaGCTGCGCTCCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SRHRVHRGFLETALSSKEGVAVG*LRSSRH
Trigger: GTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCC...CTCCTTGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR GCA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCCTGGGGGATGTGCTCTaGCCAGCCGCCCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSLGDVL*PAALGE
Trigger: CTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAG...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGGGTGTGTGTGCCAAATaGTTCCGACGGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRGVCAK*FRRRCW
Trigger: CCAGCACCTCCGTCGGAAGCATTTGGCACACACACC...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp AGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACCCGGCGCCGGAAGCCGGTCCTaGTGGCCAGGTGTTTTACGT +
Preference number: 4 (lower is better)
Translates to: SKGLGADGWSHGGICPPGAGSRS*WPGVLR
Trigger: ACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGC...GCCGGGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGCGCGATGGGTCCACCTaGATGATGCTGACGTACTCC +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRRDGST*MMLTYS
Trigger: GGAGTACGTCAGCATCATCCAGGTGGACCCATCGCG...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp CACTCCTTCCTGGCTCGCTGCCGCTGCCTGAAACCGTACAGCTGCAGCCCCATGGCTGCTCAGTCAGGGTaGCCGTGTGGTGACGCATCC +
Preference number: 4 (lower is better)
Translates to: HSFLARCRCLKPYSCSPMAAQSG*PCGDAS
Trigger: GGATGCGTCACCACACGGCCACCCTGACTGAGCAGC...CATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR CCA 90 bp TGCGGTGAGACAGGCCGCGGTGCAGCCTCCACTCCTTCCTGGCTCGCTGCCGCTTGCACAGGGGGTTTCTaGAAACGGCTCTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CGETGRGAASTPSWLAAACTGGF*KRLSPP
Trigger: TGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCA...AGCGGCAGCGAGCCAGGAAGGAGTGGAGGCTGCACCGCGGCCTGTCTCACCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR CCA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGATCTCTCTGCCCCGTGTaGTCATCAAGTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGSLCPV*SSSPGG
Trigger: TCCCCCAGGACTTGATGACCACACGGGGCAGAGAGA...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGTCAGCAGGGAAATGTaGCACACGCCCTCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGVSREM*HTPSRH
Trigger: ATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGAC...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAAGTCGCACGCGCTTaGCCAGAGCACAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGEVARA*PEHSEA
Trigger: TGCTTCACTGTGCTCTGGCCAAGCGCGTGCGACTTC...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp CGCTGCCTGAAACCGTACAGCTGCAGCCCCATGGACAGCACCAGGTGCAGCAGTGGTGCAGCAGTGAGATaGCCCCCAGCAGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: RCLKPYSCSPMDSTRCSSGAAVR*PPAACS
Trigger: GCTACAGGCTGCTGGGGGTCATCTCACTGCTGCACC...ACTGCTGCACCTGGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR TCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCTCGCTGCCGCTGCCTaGAACCGTACAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSLAAAA*NRTAAA
Trigger: GGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAG...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp TTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCTCGCTGCCGCTGCCTaGAACCGTACAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FARVFAGSRSCWPGVLRQLAAAA*NRTAAA
Trigger: GGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAG...CTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGAAGCTTGTGTGTCCCTaGCCCAAGATAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: APCGHQVLGDVLCPAALGKLVCP*PKIASA
Trigger: AGCACTGGCTATCTTGGGTCAGGGACACACAAGCTT...CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp ATGCAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGACCTCGCACCTTAGCGTaGGCTGCAGACAGTCTGCGA +
Preference number: 4 (lower is better)
Translates to: MQCHQHATAQRGGHMYPRPRTLA*AADSLR
Trigger: TCGCAGACTGTCTGCAGCTCACGCTAAGGTGCGAGG...TCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR GCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGCAGGGTCTGGTAGCCTaGAAGTGTGGTGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRQGLVA*KCGEAK
Trigger: TTTGGCCTCACCACACTTGCAGGCTACCAGACCCTG...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp TTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGAGCGCCCTCCTCTGCTaGTCAGTCAGGGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: FARVFAGSRSCWPGVLRQSALLC*SVRVAV
Trigger: CACGGCCACCCTGACTGAGCAGCAGAGGAGGGCGCT...CTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTAGCAGCGCCCTCCTCTaGTGCTCAGTCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HTPRTWLVSASGSGRDLSSSALL*CSVRVA
Trigger: GGCCACCCTGACTGAGCAGCAGAGGAGGGCGCTGCT...AGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR GCA 90 bp CTGGCTCGCTGCCGCTGCCTGAAACCGTACAGCTGCAGCCCCATGGACAGCACCATGGACAGCACCAGGTaGAGCAGTGAGATGACCCCC +
Preference number: 4 (lower is better)
Translates to: LARCRCLKPYSCSPMDSTMDSTR*SSEMTP
Trigger: GGGGGTCATCTCACTGCTGCACCTGGTGCTGTCCAT...GGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR GCA 90 bp TGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAGCCTGAAACCGTACAGCTaGAGCCCCATGGACAGCACC +
Preference number: 4 (lower is better)
Translates to: CGHQVLGDVLCPAALGESLKPYS*SPMDST
Trigger: GGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAG...GCTCTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CCTGGCTCGCTGCCGCTGCCTGAAACCGTACAGCTGCAGCCCCATGGACAGCACCCTCCAGGCACAGGGTaGACAGGGGGTTTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PGSLPLPETVQLQPHGQHPPGTG*TGGFWK
Trigger: TTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGG...GTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR GCA 90 bp GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGACCCAAGATAGCCAGTaGTGCTCCCAGGTGGTACTT +
Preference number: 4 (lower is better)
Translates to: APCGHQVLGDVLCPAALGTQDSQ*CSQVVL
Trigger: AAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGT...CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGCCTGTGCTCATCTCTTaGTCCGGGATTCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QCHQHATAQRGGHMYPRWPVLIS*SGIPLS
Trigger: GCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGG...CCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR CCA 90 bp GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGCACATGTATCCGCGATaGGTCCACCTGGATGATGCT +
Preference number: 4 (lower is better)
Translates to: APCGHQVLGDVLCPAALGHMYPR*VHLDDA
Trigger: AGCATCATCCAGGTGGACCCATCGCGGATACATGTG...CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp GAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGGCAGGGCGTGGCTGTTaGGTGCCTGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ECVWVRKRPLCASQAEMQAGRGC*VPALLQ
Trigger: CTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGC...CTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp TGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAGCGTGGTCATCAAGTCCTaGGGGATGTGCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: CGHQVLGDVLCPAALGESVVIKS*GMCSAQ
Trigger: CTGGGCAGAGCACATCCCCCAGGACTTGATGACCAC...GCTCTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp CGAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCATCTCTCTGCCCCGTGTaGTCATCAAGTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: RAEGLNTAVTVGQQVACPSLCPV*SSSPGG
Trigger: TCCCCCAGGACTTGATGACCACACGGGGCAGAGAGA...TGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp AGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACCCGGCGCAGGCTCCTCACTCTaGGCGGTGTTTCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SKGLGADGWSHGGICPPGAGSSL*AVFPVS
Trigger: TGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGC...GCCGGGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp AGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGGAGCCTGCAAGTGTGGTaGGGCCAAAGTAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: SVTSTPRRSEEGTCIRDGSLQVW*GQSRPH
Trigger: ATGTGGCCTACTTTGGCCTCACCACACTTGCAGGCT...CCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514502.1
CDS-3UTR TCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGGGTGCAGCAGTGAGATaGCCCCCAGCAGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLGAAVR*PPAACS
Trigger: GCTACAGGCTGCTGGGGGTCATCTCACTGCTGCACC...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR TCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCACCAGGTGCAGCAGTaGGATGACCCCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSHQVQQ*DDPQQP
Trigger: AGGCTGCTGGGGGTCATCTCACTGCTGCACCTGGTG...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGCCAGGACCTGGCTCGTaGGTGCGTCTGGGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLPGPGS*VRLGQE
Trigger: TTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGG...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR TCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGAAGCTTGTGTGTCCCTaGCCCAAGATAGCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRKLVCP*PKIASA
Trigger: AGCACTGGCTATCTTGGGTCAGGGACACACAAGCTT...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp ATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGTCTGGGCTCCGGGATTCCCCTaGGCAACTGTTCTAGGGCCT +
Preference number: 4 (lower is better)
Translates to: IRDGSTWMMLTYSSPRVWAPGFP*ATVLGP
Trigger: AGGCCCTAGAACAGTTGCTCAGGGGAATCCCGGAGC...CCAGACCCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR GCA 90 bp CTGGCTCGCTGCCGCTGCCTGAAACCGTACAGCTGCAGCCCCATGGACAGCACCCAGGGTCTGGTAGCCTaGAAGTGTGGTGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LARCRCLKPYSCSPMDSTQGLVA*KCGEAK
Trigger: TTTGGCCTCACCACACTTGCAGGCTACCAGACCCTG...GGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR GCA 90 bp CTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTCTGTCGGGGTCAGCCTaGAGCTCCTGCTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LCRKPVLLARCFTSAGKCLSGSA*SSCSRG
Trigger: CCCCCTGGAGCAGGAGCTGCAGGCTGACCCCGACAG...ACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCGTGGCTGTTGGGTaGCTGCGCTCCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LCRKPVLLARCFTSAGKCGVAVG*LRSSRH
Trigger: GTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCC...ACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTGGTGTGTGTGCCAAATaGTTCCGACGGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRIGVCAK*FRRRCW
Trigger: CCAGCACCTCCGTCGGAAGCATTTGGCACACACACC...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGGACCTGGCTCGTGAGTaGGTCTGGGTCAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PQDLARECVWVRKRPLCADLARE*VWVRKR
Trigger: TCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTC...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGGTTTGCGCGGGTCTTTaGCGGAAGCCGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLVCAGL*RKPVLL
Trigger: CAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAAC...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR GCA 90 bp AGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTGTTTGCGCGGGTCTTTaGCGGAAGCCGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RHGLRGSLPEAGPAGQVFVCAGL*RKPVLL
Trigger: CAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAAC...AAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGCAAGATAGCCAGTGCTaGTCCCAGGTGGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRQDSQC*SQVVLL
Trigger: CAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTG...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp ATGCAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGACGCGATGGGTCCACCTaGATGATGCTGACGTACTCC +
Preference number: 4 (lower is better)
Translates to: MQCHQHATAQRGGHMYPRRDGST*MMLTYS
Trigger: GGAGTACGTCAGCATCATCCAGGTGGACCCATCGCG...TCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR CCA 90 bp CCACTCCTTCCTGGCTCGCTGCCGCTGCCTGAAACCGTACAGCTGCAGCCCCATCGCGATGGGTCCACCTaGATGATGCTGACGTACTCC +
Preference number: 4 (lower is better)
Translates to: PLLPGSLPLPETVQLQPHRDGST*MMLTYS
Trigger: GGAGTACGTCAGCATCATCCAGGTGGACCCATCGCG...ATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR CCA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGACACATGTATCCGCGATaGGTCCACCTGGATGATGCT +
Preference number: 4 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGHMYPR*VHLDDA
Trigger: AGCATCATCCAGGTGGACCCATCGCGGATACATGTG...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp AGAACAGGTGGCCGCAGGGCGTGGCTGTTGGGTGCCTGCGCTCCTCCAGGCACACACATGTATCCGCGATaGGTCCACCTGGATGATGCT +
Preference number: 4 (lower is better)
Translates to: RTGGRRAWLLGACAPPGTHMYPR*VHLDDA
Trigger: AGCATCATCCAGGTGGACCCATCGCGGATACATGTG...TGTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACCTGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR CCA 90 bp CATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGCTGCTCAGTCAGGGTaGCCGTGTGGTGACGCATCC +
Preference number: 4 (lower is better)
Translates to: HTPRTWLVSASGSGRDLSAAQSG*PCGDAS
Trigger: GGATGCGTCACCACACGGCCACCCTGACTGAGCAGC...AGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGGCAACATGTAGCCGCTaGAGGCAGGCGAGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLATCSR*RQARPC
Trigger: ACAGGGCCTCGCCTGCCTCCAGCGGCTACATGTTGC...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCGCAACATGTAGCCGCTaGAGGCAGGCGAGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSATCSR*RQARPC
Trigger: ACAGGGCCTCGCCTGCCTCCAGCGGCTACATGTTGC...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp TGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAGCGTTAGGGAAATGTTCTaGGTTCAGGCGCCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: CGHQVLGDVLCPAALGESVREMF*VQAPLP
Trigger: TGGGAGGGGCGCCTGAACCCAGAACATTTCCCTAAC...GCTCTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp GAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCTCCCATGGGGCCGTaGGGCTGCTGTTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: EAGPAGQVFYVSREMWHTPPMGP*GCCSHC
Trigger: GCAGTGAGAACAGCAGCCCCACGGCCCCATGGGAGG...CGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTGTGGTCATCAAGTCCTaGGGGATGTGCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRIVVIKS*GMCSAQ
Trigger: CTGGGCAGAGCACATCCCCCAGGACTTGATGACCAC...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTTCTCTCTGCCCCGTGTaGTCATCAAGTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRISLCPV*SSSPGG
Trigger: TCCCCCAGGACTTGATGACCACACGGGGCAGAGAGA...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp TTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCATACCCCCAGGACCTaGCTCGTGAGTGCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FARVFAGSRSCWPGVLRQHTPRT*LVSASG
Trigger: CCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATG...CTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp CCACTCCTTCCTGGCTCGCTGCCGCTGCCTGAAACCGTACAGCTGCAGCCCCATAGCCTGCAAGTGTGGTaGGGCCAAAGTAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: PLLPGSLPLPETVQLQPHSLQVW*GQSRPH
Trigger: ATGTGGCCTACTTTGGCCTCACCACACTTGCAGGCT...ATGGGGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAGGAAGGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR TCA 90 bp GAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGGGTGCAGCAGTGAGATaGCCCCCAGCAGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: EAGPAGQVFYVSREMWHTGAAVR*PPAACS
Trigger: GCTACAGGCTGCTGGGGGTCATCTCACTGCTGCACC...CGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTAGTGCCGAAGGTAGATaGGCTTCTGGGGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRISAEGR*ASGEGT
Trigger: AGTTCCCTCCCCAGAAGCTCATCTACCTTCGGCACT...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGCCTTAACACAAGCCTaGTGGGGCTGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGALTQA*WGCFLT
Trigger: TGTGAGAAAACAGCCCCATCAGGCTTGTGTTAAGGC...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCTCTCACTGCACTGGCTaGAGCAACCCGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSSHCTG*SNPPAS
Trigger: GGAGGCTGGCGGGTTGCTTCAGCCAGTGCAGTGAGA...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGACACTGACATGCGAGTaGAGGCCTCTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLTLTCE*RPLLLG
Trigger: GCCCAGGAGGAGAGGCCTTCACTCGCATGTCAGTGT...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp AGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGGTACCTGCAAGTGTGGTaGGGCCAAAGTAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: SVTSTPRRSEEGTCIRDGYLQVW*GQSRPH
Trigger: ATGTGGCCTACTTTGGCCTCACCACACTTGCAGGTA...CCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502666.1
CDS-3UTR GCA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGCAGGGTCTGGTAGCCTaGAAGTGTGGTGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PQDLARECVWVRKRPLCAQGLVA*KCGEAK
Trigger: TTTGGCCTCACCACACTTGCAGGCTACCAGACCCTG...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGGGCCCCAGGCTCCCCTaGAAGGGTCGCCCACTGTCG +
Preference number: 4 (lower is better)
Translates to: LEATLTCIEGVCAKCFRRGPRLP*KGRPLS
Trigger: CGACAGTGGGCGACCCTTGCAGGGGAGCCTGGGGCC...CCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTAAGTCCTGGGGGATGTaGTCTGCCCAGCCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LCRKPVLLARCFTSAGKCKSWGM*SAQPPS
Trigger: CGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTT...ACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGATGGTTGGTTTCTCTCTaGCCCGTGTGGTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGWLVSL*PVWSSS
Trigger: ACTTGATGACCACACGGGGCAGAGAGAAACCAACCA...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp AGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTGCCGGAAGCCGGTCCTaGTGGCCAGGTGTTTTACGT +
Preference number: 4 (lower is better)
Translates to: RHGLRGSLPEAGPAGQVFAGSRS*WPGVLR
Trigger: ACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGC...AAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTCAGCAAGACATGGTTTaGGCGGGTCTTTGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRIQQDMV*AGLCRK
Trigger: CTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTG...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGGGCCGCAGCCCCCAGTaGCTCTCCTGGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: LEATLTCIEGVCAKCFRRGRSPQ*LSWWSS
Trigger: GGAGGACCACCAGGAGAGGCACTGGGGGCTGCGGCC...CCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTGCACAGGGGGTTTCTaGAAACGGCTCTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PQDLARECVWVRKRPLCACTGGF*KRLSPP
Trigger: TGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCA...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGCCTGAGACTAAATCTTaGCGTTCAGACTCCCGTAGA +
Preference number: 4 (lower is better)
Translates to: APCGHQVLGDVLCPAALGPETKS*RSDSRR
Trigger: TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGG...CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCCATACCCCCAGGACCTaGCTCGTGAGTGCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSHTPRT*LVSASG
Trigger: CCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATG...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGATCAAACAGCAAGACATaGTTTGCGCGGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGSNSKT*FARVFA
Trigger: GGCAAAGACCCGCGCAAACCATGTCTTGCTGTTTGA...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGCCCAGGTGGTACTTCTaGTACCGTGTTGAGACACTT +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRPRWYF*YRVETL
Trigger: AAGTGTCTCAACACGGTACCAGAAGTACCACCTGGG...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGAGCCCACCTTTTGTTTaGCCTTTTCGAAAGGTGACC +
Preference number: 4 (lower is better)
Translates to: APCGHQVLGDVLCPAALGSPPFV*PFRKVT
Trigger: GGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCT...CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp GAAGAATCTCCCACCTGTGCTCATCTCTTGCTCCGGGATTCCCCTGAGCAACTGTGCCTGGCAGCCCCCTaGCCACCGTCCCCAGACTTG +
Preference number: 4 (lower is better)
Translates to: EESPTCAHLLLRDSPEQLCLAAP*PPSPDL
Trigger: CAAGTCTGGGGACGGTGGCCAGGGGGCTGCCAGGCA...CAGTTGCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502666.1
CDS-3UTR TCA 90 bp TGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAGCAAAGTAGGCCACATCTaGGAGCAGCTCAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: CGHQVLGDVLCPAALGESKVGHI*EQLNLL
Trigger: AAGGAGGTTGAGCTGCTCTCAGATGTGGCCTACTTT...GCTCTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CCCCACCCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCACCAGGTGCAGCAGTaGGATGACCCCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PHPARTHSVHCLNTSLMGHQVQQ*DDPQQP
Trigger: AGGCTGCTGGGGGTCATCTCACTGCTGCACCTGGTG...CCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGGGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGAACTGGAAGCGACCTTaGCGTGTATTGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRNWKRP*RVLKVC
Trigger: ACACACCTTCAATACACGTCAAGGTCGCTTCCAGTT...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp TGCGAAGAATCTCCCACCTGTGCTCATCTCTTGCTCCGGGATTCCCCTGAGCAAGGCTGCCCTCAGTCCTaGGGTCCCGTGGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CEESPTCAHLLLRDSPEQGCPQS*GPVGAS
Trigger: AGAAGCTCCCACGGGACCTCAGGACTGAGGGCAGCC...TTGCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCTTCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502666.1
CDS-3UTR GCA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTGGCCCCAGGCTCCCCTaGAAGGGTCGCCCACTGTCG +
Preference number: 4 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFGPRLP*KGRPLS
Trigger: CGACAGTGGGCGACCCTTGCAGGGGAGCCTGGGGCC...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCAAGCAGCGCCCTCCTCTaGTGCTCAGTCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LTSSSSKRPRSSLCVPDPSSALL*CSVRVA
Trigger: GGCCACCCTGACTGAGCAGCAGAGGAGGGCGCTGCT...TGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp AGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTCTGAAACCGTACAGCTaGAGCCCCATGGACAGCACC +
Preference number: 4 (lower is better)
Translates to: RHGLRGSLPEAGPAGQVFLKPYS*SPMDST
Trigger: GGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAG...AAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CCCCACCCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGGCTCGCTGCCGCTaGCTGAAACCGTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PHPARTHSVHCLNTSLMGLARCR*LKPYSC
Trigger: GCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAG...CCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCCTCCAGGCACAGGGTaGACAGGGGGTTTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSPPGTG*TGGFWK
Trigger: TTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGG...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGGGCGTGGCTGTTGGGTaGCTGCGCTCCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LEATLTCIEGVCAKCFRRGVAVG*LRSSRH
Trigger: GTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCC...CCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGACCTGGCTCGTGAGTaGGTCTGGGTCAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HTPRTWLVSASGSGRDLSDLARE*VWVRKR
Trigger: TCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTC...AGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR GCA 90 bp ATGCAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGAAGAATCTCCCACCTGTaGTCATCTCTTGCTCCGGGA +
Preference number: 4 (lower is better)
Translates to: MQCHQHATAQRGGHMYPRRISHL*SSLAPG
Trigger: TCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCT...TCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR CCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGCGCGATGGGTCCACCTaGATGATGCTGACGTACTCC +
Preference number: 4 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLRDGST*MMLTYS
Trigger: GGAGTACGTCAGCATCATCCAGGTGGACCCATCGCG...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp TGCAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATCACATGTATCCGCGATaGGTCCACCTGGATGATGCT +
Preference number: 4 (lower is better)
Translates to: CSVTSTPRRSEEGTCIRDHMYPR*VHLDDA
Trigger: AGCATCATCCAGGTGGACCCATCGCGGATACATGTG...ATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR CCA 90 bp TTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGGGTGCTGGCCTTGGTTaGTTTCTCTCTGCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: FARVFAGSRSCWPGVLRQGAGLG*FLSAPC
Trigger: ACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACC...CTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp TGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAGCCCTGGAAACATCAAATaGAGGCGGGAAATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CGHQVLGDVLCPAALGESPGNIK*RREIGW
Trigger: CCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG...GCTCTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp CTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTCTGGGTGCTGATGGATaGAGCCACGGCGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: LCRKPVLLARCFTSAGKCLGADG*SHGGIC
Trigger: GCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAG...ACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGAGTGAAGCAAAGGACTaGGTGCTGATGGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: PQDLARECVWVRKRPLCASEAKD*VLMDGA
Trigger: GGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACT...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCGCAGGCTCCTCACTCTaGGCGGTGTTTCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSAGSSL*AVFPVS
Trigger: TGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGC...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCAGCCTGCAAGTGTGGTaGGGCCAAAGTAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSSLQVW*GQSRPH
Trigger: ATGTGGCCTACTTTGGCCTCACCACACTTGCAGGCT...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp TTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGAGCCTGCAAGTGTGGTaGGGCCAAAGTAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: FARVFAGSRSCWPGVLRQSLQVW*GQSRPH
Trigger: ATGTGGCCTACTTTGGCCTCACCACACTTGCAGGCT...CTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp CCCCACCCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGACACTGACATGCGAGTaGAGGCCTCTCCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PHPARTHSVHCLNTSLMGTLTCE*RPLLLG
Trigger: GCCCAGGAGGAGAGGCCTTCACTCGCATGTCAGTGT...CCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp GCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCAAGCTGTGGTCCCAGATaGGACACTGACATGCGAGTG +
Preference number: 4 (lower is better)
Translates to: AGSRSCWPGVLRQQGNVASCGPR*DTDMRV
Trigger: CACTCGCATGTCAGTGTCTCATCTGGGACCACAGCT...TGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp TATCTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCTGTCGGGGTCAGCCTaGAGCTCCTGCTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: YLTSSSSKRPRSSLCVPDLSGSA*SSCSRG
Trigger: CCCCCTGGAGCAGGAGCTGCAGGCTGACCCCGACAG...GTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAGACTGTCTGTCGGGGTCAGCCTaGAGCTCCTGCTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPGGTSGTVLRHLGFSDCLSGSA*SSCSRG
Trigger: CCCCCTGGAGCAGGAGCTGCAGGCTGACCCCGACAG...ACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR GCA 90 bp GAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCAAGCGCCCTCCTCTGCTaGTCAGTCAGGGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: ETKSWRSDSRRGHLCPGPSALLC*SVRVAV
Trigger: CACGGCCACCCTGACTGAGCAGCAGAGGAGGGCGCT...TGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp GAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCATGGCTGTTGGGTGCCTaGGCTCCTCCAGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: ETKSWRSDSRRGHLCPGPWLLGA*APPGTG
Trigger: CCCTGTGCCTGGAGGAGCGCAGGCACCCAACAGCCA...TGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp TTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGTGCTTCCGACGGAGGTaGTGGCCTTGGTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: FARVFAGSRSCWPGVLRQCFRRR*WPWLVS
Trigger: AGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCA...CTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTCAGCAAGACATGGTTTaGGCGGGTCTTTGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: HTPRTWLVSASGSGRDLSQQDMV*AGLCRK
Trigger: CTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTG...AGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp TATCTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACGCAGGGCGTGGCTGTTaGGTGCCTGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: YLTSSSSKRPRSSLCVPDAGRGC*VPALLQ
Trigger: CTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGC...GTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCGTTAGGGAAATGTTCTaGGTTCAGGCGCCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSVREMF*VQAPLP
Trigger: TGGGAGGGGCGCCTGAACCCAGAACATTTCCCTAAC...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp CTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGCCTCCCATGGGGCCGTaGGGCTGCTGTTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LEATLTCIEGVCAKCFRRPPMGP*GCCSHC
Trigger: GCAGTGAGAACAGCAGCCCCACGGCCCCATGGGAGG...CCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCGGTGCTGGCCTTGGTTaGTTTCTCTCTGCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSGAGLG*FLSAPC
Trigger: ACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACC...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp AGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTTCCGACGGAGGTGCTaGCCTTGGTTGGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RHGLRGSLPEAGPAGQVFFRRRC*PWLVSL
Trigger: GAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAA...AAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCGCTCGTGAGTGCGTCTaGGTCAGGAAGAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSARECV*VRKRPL
Trigger: GAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGC...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp CTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGCGGGAAATAGGCTaGGGCCGAGCTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LEATLTCIEGVCAKCFRRRREIG*GRAEGL
Trigger: CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCT...CCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp GAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGGTCAGCAGGGAAATGTaGCACACGCCCTCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: EAGPAGQVFYVSREMWHTVSREM*HTPSRH
Trigger: ATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGAC...CGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp GTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGTCAGCAGGGAAATGTaGCACACGCCCTCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: VLLARCFTSAGKCGTRPRVSREM*HTPSRH
Trigger: ATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGAC...TCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGCCCAGGTGGTACTTCTaGTACCGTGTTGAGACACTT +
Preference number: 4 (lower is better)
Translates to: PQDLARECVWVRKRPLCAPRWYF*YRVETL
Trigger: AAGTGTCTCAACACGGTACCAGAAGTACCACCTGGG...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTGAAGGCCTCTCCTCCTaGGCCCCGGGCTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LKHGSRWTQESPPFVWPFEGLSS*APGCAG
Trigger: GCCTGCGCAGCCCGGGGCCCAGGAGGAGAGGCCTTC...AAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp CTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTAAGGAGGCCCTGCGGTaGGACAGGCCGCGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LKHGSRWTQESPPFVWPFKEALR*DRPRCS
Trigger: GCTGCACCGCGGCCTGTCTCACCGCAGGGCCTCCTT...AAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp CTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCATGCTGCACCACGCGGTaGTGCACTCCCAGCAGAACA +
Preference number: 4 (lower is better)
Translates to: LTSSSSKRPRSSLCVPDPCCTTR*CTPSRT
Trigger: TGTTCTGCTGGGAGTGCATCACCGCGTGGTGCAGCA...TGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp GAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCAGGACCTGGCTCGTaGGTGCGTCTGGGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ETKSWRSDSRRGHLCPGPPGPGS*VRLGQE
Trigger: TTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGG...TGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTAGGCTGGGGCCGAGCTaGGGGGCTGAACACAGCAGT +
Preference number: 4 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFRLGPS*GAEHSS
Trigger: ACTGCTGTGTTCAGCCCCTCAGCTCGGCCCCAGCCT...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR TCA 90 bp GTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAAGCTGTGGTCCCAGATaGGACACTGACATGCGAGTG +
Preference number: 4 (lower is better)
Translates to: VLLARCFTSAGKCGTRPRSCGPR*DTDMRV
Trigger: CACTCGCATGTCAGTGTCTCATCTGGGACCACAGCT...TCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp GAGGAGGGCACATGTATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCCAGGGTCTGGTAGCCTaGAAGTGTGGTGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: EEGTCIRDGSTWMMLTYSQGLVA*KCGEAK
Trigger: TTTGGCCTCACCACACTTGCAGGCTACCAGACCCTG...GGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGTGCCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514502.1
CDS-3UTR GCA 90 bp CAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACAGCGCCCTCCTCTGCTaGTCAGTCAGGGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: QVFYVSREMWHTPSRHFNSALLC*SVRVAV
Trigger: CACGGCCACCCTGACTGAGCAGCAGAGGAGGGCGCT...GTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp TGTGCAAGCAAGGTTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAACCCGCCAGCCTCCGTaGCCCACCCCACCCAGCACG +
Preference number: 4 (lower is better)
Translates to: CASKVNPETKSWRSDSRRTRQPP*PTPPST
Trigger: CGTGCTGGGTGGGGTGGGGCACGGAGGCTGGCGGGT...TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAACCTTGCTTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CCCCACCCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGGACCTGGCTCGTGAGTaGGTCTGGGTCAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PHPARTHSVHCLNTSLMGDLARE*VWVRKR
Trigger: TCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTC...CCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGGGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGCTGGCGCAGGTTAAATaGAGTTTTGAAAACCTGGAA +
Preference number: 4 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRLAQVK*SFENLE
Trigger: TTCCAGGTTTTCAAAACTGCATTTAACCTGCGCCAG...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR GCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCAAGATAGCCAGTGCTaGTCCCAGGTGGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSQDSQC*SQVVLL
Trigger: CAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTG...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp TGCTCCGGGATTCCCCTGAGCAACTGTTCTAGGGCCTATGAGGGCCACATGGAACCTGTGCTCATCTCTTaGTCCGGGATTCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: CSGIPLSNCSRAYEGHMEPVLIS*SGIPLS
Trigger: GCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGG...TTCCATGTGGCCCTCATAGGCCCTAGAACAGTTGCTCAGGGGAATCCCGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR GCA 90 bp TATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGTCTGGAGCTGCAGACAGTCTaGGAAGAATCTCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: YPRWVHLDDADVLLPQGLELQTV*EESPTC
Trigger: ACAGGTGGGAGATTCTTCGCAGACTGTCTGCAGCTC...CAGACCCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR CCA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGCACATGTATCCGCGATaGGTCCACCTGGATGATGCT +
Preference number: 4 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLHMYPR*VHLDDA
Trigger: AGCATCATCCAGGTGGACCCATCGCGGATACATGTG...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp TGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACACTGGCAGGGCGTGGCTGTTaGGTGCCTGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: CFTSAGKCGTRPRGILTLAGRGC*VPALLQ
Trigger: CTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGC...CAGTGTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTCCTGAGACTAAATCTTaGCGTTCAGACTCCCGTAGA +
Preference number: 4 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRIPETKS*RSDSRR
Trigger: TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGG...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTTCTCTCTGCCCCGTGTaGTCATCAAGTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LCRKPVLLARCFTSAGKCSLCPV*SSSPGG
Trigger: TCCCCCAGGACTTGATGACCACACGGGGCAGAGAGA...ACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGCTCGTGAGTGCGTCTaGGTCAGGAAGAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: LCRKPVLLARCFTSAGKCARECV*VRKRPL
Trigger: GAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGC...ACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGCTGGGTGCTGATGGATaGAGCCACGGCGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: LEATLTCIEGVCAKCFRRLGADG*SHGGIC
Trigger: GCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAG...CCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCAGTGCTGCTCCCAGGTaGTACTTCTGGTACCGTGTT +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSSAAPR*YFWYRV
Trigger: AACACGGTACCAGAAGTACCACCTGGGAGCAGCACT...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp AGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTAAACATGGCAGTCGCTaGACACAGGAAAGCCCACCT +
Preference number: 4 (lower is better)
Translates to: RHGLRGSLPEAGPAGQVFKHGSR*TQESPP
Trigger: AGGTGGGCTTTCCTGTGTCCAGCGACTGCCATGTTT...AAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp CTCCTCCAGGCACAGGGTGCACAGGGGGTTTCTGGAAACGGCTCTCTCCTCCAAAAAGTAGGCCACATCTaGGAGCAGCTCAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLQAQGAQGVSGNGSLLQKVGHI*EQLNLL
Trigger: AAGGAGGTTGAGCTGCTCTCAGATGTGGCCTACTTT...TTGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510434.1
CDS-3UTR TCA 90 bp GAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGCCTTCTGGCCTACTTCTaGATTACTTCTCAACTGTAT +
Preference number: 4 (lower is better)
Translates to: EGLNTAVTVGQQVACPAGLLAYF*ITSQLY
Trigger: ATACAGTTGAGAAGTAATTCAGAAGTAGGCCAGAAG...GCCTGCTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR TCA 90 bp CAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACTCTCACTGCACTGGCTaGAGCAACCCGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QVFYVSREMWHTPSRHFNSHCTG*SNPPAS
Trigger: GGAGGCTGGCGGGTTGCTTCAGCCAGTGCAGTGAGA...GTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp ATGTGGCACACGCCCTCGAGGCATTTTAACACTGCGCTTCAGGAAATCTCAAGTAGCAGCGCCCTCCTCTaGTGCTCAGTCAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: MWHTPSRHFNTALQEISSSSALL*CSVRVA
Trigger: GGCCACCCTGACTGAGCAGCAGAGGAGGGCGCTGCT...ACTTGAGATTTCCTGAAGCGCAGTGTTAAAATGCCTCGAGGGCGTGTGCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACCTGGCTCGCTGCCGCTaGCTGAAACCGTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: QVFYVSREMWHTPSRHFNLARCR*LKPYSC
Trigger: GCAGCTGTACGGTTTCAGGCAGCGGCAGCGAGCCAG...GTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp TGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAGCACTCATTCAGTCCATTaGCTTAACACAAGCCTGATG +
Preference number: 4 (lower is better)
Translates to: CGHQVLGDVLCPAALGESTHSVH*LNTSLM
Trigger: CATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGT...GCTCTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTATGGGGCCGTGGGGCTaGTGTTCTCACTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFMGPWG*CSHCTG
Trigger: GCCAGTGCAGTGAGAACAGCAGCCCCACGGCCCCAT...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp GGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGATTTCTGTTTTCTAAACTGGGGGATGTGCTCTaGCCAGCCGCCCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRDLSVRLRLRCRFLFSKLGDVL*PAALGE
Trigger: CTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAG...TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp TGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACACTGAAGTCCTGGGGGATGTaGTCTGCCCAGCCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: CFTSAGKCGTRPRGILTLKSWGM*SAQPPS
Trigger: CGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTT...CAGTGTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTTGCTTCCGACGGAGGTaGTGGCCTTGGTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LCRKPVLLARCFTSAGKCCFRRR*WPWLVS
Trigger: AGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCA...ACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp ACATGTATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGTGGGAGCTTCTACCTaGAAGTGTGGTGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: TCIRDGSTWMMLTYSSPRVGAST*KCGEAK
Trigger: TTTGGCCTCACCACACTTGCAGGTAGAAGCTCCCAC...CCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502666.1
CDS-3UTR CCA 90 bp ACATGTATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGCACATGTATCCGCGATaGGTCCACCTGGATGATGCT +
Preference number: 4 (lower is better)
Translates to: TCIRDGSTWMMLTYSSPRHMYPR*VHLDDA
Trigger: AGCATCATCCAGGTGGACCCATCGCGGATACATGTG...CCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR CCA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCCACATGTATCCGCGATaGGTCCACCTGGATGATGCT +
Preference number: 4 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSHMYPR*VHLDDA
Trigger: AGCATCATCCAGGTGGACCCATCGCGGATACATGTG...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp CTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAGACTGTGCAACATGTAGCCGCTaGAGGCAGGCGAGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LPGGTSGTVLRHLGFSDCATCSR*RQARPC
Trigger: ACAGGGCCTCGCCTGCCTCCAGCGGCTACATGTTGC...ACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp CTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAGACTGTTCTGGCCTCAGCGCCTaGTACGTGATCCCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LPGGTSGTVLRHLGFSDCSGLSA*YVIPVS
Trigger: GCTCACGGGGATCACGTACCAGGCGCTGAGGCCAGA...ACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288774.8
CDS-3UTR CCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCTCAAACAGCAAGACATaGTTTGCGCGGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSSNSKT*FARVFA
Trigger: GGCAAAGACCCGCGCAAACCATGTCTTGCTGTTTGA...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp TTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCCCAGGTGGTACTTCTaGTACCGTGTTGAGACACTT +
Preference number: 4 (lower is better)
Translates to: FARVFAGSRSCWPGVLRQPRWYF*YRVETL
Trigger: AAGTGTCTCAACACGGTACCAGAAGTACCACCTGGG...CTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp GGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCGAAGGCCTCTCCTCCTaGGCCCCGGGCTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GVSLLKMPTVNSLAQVKCEGLSS*APGCAG
Trigger: GCCTGCGCAGCCCGGGGCCCAGGAGGAGAGGCCTTC...GCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp AGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGGCATGGAAAGATGGTCTaGGGTATTAAGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: SVTSTPRRSEEGTCIRDGHGKMV*GIKITG
Trigger: GCCTGTAATCTTAATACCCCAGACCATCTTTCCATG...CCCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR CCA 90 bp TGTATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGTCCCTATGAGGGCCACATaGAAAGATGGTCTGGGGTAT +
Preference number: 4 (lower is better)
Translates to: CIRDGSTWMMLTYSSPRVPMRAT*KDGLGY
Trigger: ATACCCCAGACCATCTTTCCATGTGGCCCTCATAGG...GACCCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR CCA 90 bp CTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAAAACCCCCAGGACCTaGCTCGTGAGTGCGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LEATLTCIEGVCAKCFRRKTPRT*LVSASG
Trigger: CCCAGACGCACTCACGAGCCAGGTCCTGGGGGTTTT...CCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650293.1
3UTR CAA 72 bp TGTGTGTGCCAAATGCTTCCGACGGAGGTGCTGGCCTaGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAG +
Preference number: 4 (lower is better)
Translates to: CVCQMLPTEVLA*VGFSLPRVVIK
Trigger: CTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCATTTGGCACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CAGCGAGGAGGGCACATGTATCCGCGATGGGTCCACCTGGATGATGCTGACGTAAAAGTAGGCCACATCTaGGAGCAGCTCAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: QRGGHMYPRWVHLDDADVKVGHI*EQLNLL
Trigger: AAGGAGGTTGAGCTGCTCTCAGATGTGGCCTACTTT...TACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGTGCCCTCCTCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR TCA 90 bp GGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGATTTCTGTTTTCTAAAAGGCGAGGCCCTGTCTaGGGACGAAGACCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GRDLSVRLRLRCRFLFSKRRGPV*GRRPPA
Trigger: TGCGGGCGGTCTTCGTCCTCAGACAGGGCCTCGCCT...TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp ATGTGGCACACGCCCTCGAGGCATTTTAACACTGCGCTTCAGGAAATCTCAAGTGGTGCAGCAGTGAGATaGCCCCCAGCAGCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: MWHTPSRHFNTALQEISSGAAVR*PPAACS
Trigger: GCTACAGGCTGCTGGGGGTCATCTCACTGCTGCACC...ACTTGAGATTTCCTGAAGCGCAGTGTTAAAATGCCTCGAGGGCGTGTGCCACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTTGCTGCACCACGCGGTaGTGCACTCCCAGCAGAACA +
Preference number: 4 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFCCTTR*CTPSRT
Trigger: TGTTCTGCTGGGAGTGCATCACCGCGTGGTGCAGCA...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp AGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACCCGGCCTTCTGGCCTACTTCTaGATTACTTCTCAACTGTAT +
Preference number: 4 (lower is better)
Translates to: SKGLGADGWSHGGICPPGLLAYF*ITSQLY
Trigger: ATACAGTTGAGAAGTAATTCAGAAGTAGGCCAGAAG...GCCGGGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp GAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGGCCTTAACACAAGCCTaGTGGGGCTGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: ECVWVRKRPLCASQAEMQALTQA*WGCFLT
Trigger: TGTGAGAAAACAGCCCCATCAGGCTTGTGTTAAGGC...CTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCGACCTTGACGTGTATTaGAGGTGTGTGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSDLDVY*RCVCQM
Trigger: CATTTGGCACACACACCTTCAATACACGTCAAGGTC...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTAACTGGAAGCGACCTTaGCGTGTATTGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: HTPRTWLVSASGSGRDLSNWKRP*RVLKVC
Trigger: ACACACCTTCAATACACGTCAAGGTCGCTTCCAGTT...AGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR TCA 90 bp CATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTCTGTGCGTCTCAGGCTaGGATGCAGATTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: HTPRTWLVSASGSGRDLSLCVSG*DADFCF
Trigger: AAAACAGAAATCTGCATCTCAGCCTGAGACGCACAG...AGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR TCA 90 bp TATCTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCTCAGGCCTAAGGTGTaGCAGGAAGTCGCACGCGCT +
Preference number: 4 (lower is better)
Translates to: YLTSSSSKRPRSSLCVPDLRPKV*QEVARA
Trigger: AGCGCGTGCGACTTCCTGTCACACCTTAGGCCTGAG...GTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR GCA 90 bp TGTGCAAGCAAGGTTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGACTGTCGGGGTCAGCCTaGAGCTCCTGCTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: CASKVNPETKSWRSDSRRLSGSA*SSCSRG
Trigger: CCCCCTGGAGCAGGAGCTGCAGGCTGACCCCGACAG...TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAACCTTGCTTGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp AAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCAGTTTTGAAAACCTGCCTCCAAGGAGGCCCTaGGGTGAGACAGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: KMPTVNSLAQVKCSFENLPPRRP*GETGRG
Trigger: ACCGCGGCCTGTCTCACCGCAGGGCCTCCTTGGAGG...CAGGTTTTCAAAACTGCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR GCA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCTGGTTGGTTTCTCTCTaGCCCGTGTGGTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSWLVSL*PVWSSS
Trigger: ACTTGATGACCACACGGGGCAGAGAGAAACCAACCA...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp CTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCATGCACAGGGGGTTTCTaGAAACGGCTCTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LTSSSSKRPRSSLCVPDPCTGGF*KRLSPP
Trigger: TGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCA...TGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp GGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCGGTGGCCGCAGGGCGTaGCTGTTGGGTGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GVSLLKMPTVNSLAQVKCGGRRA*LLGACA
Trigger: AGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACC...GCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CCCCACCCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGAGTGCTGCTCCCAGGTaGTACTTCTGGTACCGTGTT +
Preference number: 4 (lower is better)
Translates to: PHPARTHSVHCLNTSLMGSAAPR*YFWYRV
Trigger: AACACGGTACCAGAAGTACCACCTGGGAGCAGCACT...CCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp GAAGAATCTCCCACCTGTGCTCATCTCTTGCTCCGGGATTCCCCTGAGCAACTGAGTCCTGAGGTCCCGTaGGAGCTTCTACCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: EESPTCAHLLLRDSPEQLSPEVP*ELLPAS
Trigger: ACTTGCAGGTAGAAGCTCCCACGGGACCTCAGGACT...CAGTTGCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502666.1
3UTR CAA 72 bp GTAAGTCAAACAGCAAGACATGGTTTGCGCGGGTCTTaGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTAC +
Preference number: 4 (lower is better)
Translates to: VSQTARHGLRGS*PEAGPAGQVFY
Trigger: GTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGTTTGACTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
3UTR CAA 72 bp CCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTaGAGACACTTGGGATTCTCAGACTGTGGACAGGAG +
Preference number: 4 (lower is better)
Translates to: PVLLPGGTSGTV*RHLGFSDCGQE
Trigger: CTCCTGTCCACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp TGTGCAAGCAAGGTTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGACTCGCTGCCGCTGCCTaGAACCGTACAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CASKVNPETKSWRSDSRRLAAAA*NRTAAA
Trigger: GGCTGCAGCTGTACGGTTTCAGGCAGCGGCAGCGAG...TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAACCTTGCTTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CCCCACCCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGGCCTTAACACAAGCCTaGTGGGGCTGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: PHPARTHSVHCLNTSLMGALTQA*WGCFLT
Trigger: TGTGAGAAAACAGCCCCATCAGGCTTGTGTTAAGGC...CCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGGGTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp GTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGACCTTGACGTGTATTaGAGGTGTGTGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: VLLARCFTSAGKCGTRPRDLDVY*RCVCQM
Trigger: CATTTGGCACACACACCTTCAATACACGTCAAGGTC...TCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCCTGTGCGTCTCAGGCTaGGATGCAGATTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSLCVSG*DADFCF
Trigger: AAAACAGAAATCTGCATCTCAGCCTGAGACGCACAG...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTCTTCTGGTACCGTGTTaGGACACTTGGGATTCTCAG +
Preference number: 4 (lower is better)
Translates to: LCRKPVLLARCFTSAGKCLLVPC*DTWDSQ
Trigger: CTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAG...ACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp GGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGATTTCTGTTTTCTAAAAGCGCCCTCCTCTGCTaGTCAGTCAGGGTGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GRDLSVRLRLRCRFLFSKSALLC*SVRVAV
Trigger: CACGGCCACCCTGACTGAGCAGCAGAGGAGGGCGCT...TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTATGGACAGCACCAGGTaGAGCAGTGAGATGACCCCC +
Preference number: 4 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFMDSTR*SSEMTP
Trigger: GGGGGTCATCTCACTGCTGCACCTGGTGCTGTCCAT...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp TATCTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCTGAAACCGTACAGCTaGAGCCCCATGGACAGCACC +
Preference number: 4 (lower is better)
Translates to: YLTSSSSKRPRSSLCVPDLKPYS*SPMDST
Trigger: GGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTCAG...GTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp GGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCGGCGTGGCTGTTGGGTaGCTGCGCTCCTCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GVSLLKMPTVNSLAQVKCGVAVG*LRSSRH
Trigger: GTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCC...GCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp AAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCAGTTTTGAAAACCTGAAGTCCTGGGGGATGTaGTCTGCCCAGCCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: KMPTVNSLAQVKCSFENLKSWGM*SAQPPS
Trigger: CGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTT...CAGGTTTTCAAAACTGCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR GCA 90 bp CTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGTGCTTCCGACGGAGGTaGTGGCCTTGGTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LEATLTCIEGVCAKCFRRCFRRR*WPWLVS
Trigger: AGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCA...CCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGCGTCTCAGGCTGAGATaGAGATTTCTGTTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: PQDLARECVWVRKRPLCARLRLR*RFLFSK
Trigger: TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACG...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCAAAGGTGACCCATATTaGACAGCAGAACATCACAGC +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSKGDPY*TAEHHS
Trigger: GCTGTGATGTTCTGCTGTGCAATATGGGTCACCTTT...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp TCTGCGAAGAATCTCCCACCTGTGCTCATCTCTTGCTCCGGGATTCCCCTGAGCCACCTTAGCGTGAGCTaGAGACAGTCTGCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SAKNLPPVLISCSGIPLSHLSVS*RQSAKN
Trigger: ATTCTTCGCAGACTGTCTGCAGCTCACGCTAAGGTG...GCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCTTCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR CCA 90 bp TATCTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACGGTGCTGGCCTTGGTTaGTTTCTCTCTGCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: YLTSSSSKRPRSSLCVPDGAGLG*FLSAPC
Trigger: ACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACC...GTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp TTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCAGGCGGGAAATAGGCTaGGGCCGAGCTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LILRLNLGVQTPVEVICVRREIG*GRAEGL
Trigger: CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCT...GACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp TGTGCAAGCAAGGTTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAAGGCGGGAAATAGGCTaGGGCCGAGCTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CASKVNPETKSWRSDSRRRREIG*GRAEGL
Trigger: CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCT...TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAACCTTGCTTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp CAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACGGAAGCCGGTCCTGCTaGCCAGGTGTTTTACGTCAG +
Preference number: 4 (lower is better)
Translates to: QVFYVSREMWHTPSRHFNGSRSC*PGVLRQ
Trigger: CTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCC...GTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp TGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACACTGCAGTGCCTCTCCTGGTaGTCCTCCCAGTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: CFTSAGKCGTRPRGILTLQCLSW*SSQSRG
Trigger: CCCTCTAGACTGGGAGGACCACCAGGAGAGGCACTG...CAGTGTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp TATCTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACGAAGTCGCACGCGCTTaGCCAGAGCACAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: YLTSSSSKRPRSSLCVPDEVARA*PEHSEA
Trigger: TGCTTCACTGTGCTCTGGCCAAGCGCGTGCGACTTC...GTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp TATCTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACGCAGGCTCCTCACTCTaGGCGGTGTTTCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: YLTSSSSKRPRSSLCVPDAGSSL*AVFPVS
Trigger: TGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGC...GTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp CTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAGACTGTAGCCTGCAAGTGTGGTaGGGCCAAAGTAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: LPGGTSGTVLRHLGFSDCSLQVW*GQSRPH
Trigger: ATGTGGCCTACTTTGGCCTCACCACACTTGCAGGCT...ACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTAGGCGAGGCCCTGTCTaGGGACGAAGACCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LRFRKSQVPSCVSNVPTFRRGPV*GRRPPA
Trigger: TGCGGGCGGTCTTCGTCCTCAGACAGGGCCTCGCCT...AAATGTGGGTACGTTACTAACACAAGATGGAACTTGAGATTTCCTGAAGCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp TGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTCACTCATCAGGACCCTaGGGGGATCTGGCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: WTQESPPFVWPFRKVTHIHSSGP*GDLASA
Trigger: CGCTGAGGCCAGATCCCCTCAGGGTCCTGATGAGTG...AATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288774.8
CDS-3UTR TCA 90 bp CCTTTACTAAAGTCTTTACCTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCCACCAGGTGCAGCAGTaGGATGACCCCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PLLKSLPKTWQSLDTGKPHQVQQ*DDPQQP
Trigger: AGGCTGCTGGGGGTCATCTCACTGCTGCACCTGGTG...GGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAGGTAAAGACTTTAGTAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp TTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCACCAGGTGCAGCAGTaGGATGACCCCCAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LILRLNLGVQTPVEVICVHQVQQ*DDPQQP
Trigger: AGGCTGCTGGGGGTCATCTCACTGCTGCACCTGGTG...GACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTAGTGCCGAAGGTAGATaGGCTTCTGGGGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFSAEGR*ASGEGT
Trigger: AGTTCCCTCCCCAGAAGCTCATCTACCTTCGGCACT...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCAGCCTTAACACAAGCCTaGTGGGGCTGTTTTCTCACA +
Preference number: 4 (lower is better)
Translates to: LTSSSSKRPRSSLCVPDPALTQA*WGCFLT
Trigger: TGTGAGAAAACAGCCCCATCAGGCTTGTGTTAAGGC...TGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp AAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCAGTTTTGAAAACCTGCAAAGGACTGGGTGCTaGTGGATGGAGCCACGGCGG +
Preference number: 4 (lower is better)
Translates to: KMPTVNSLAQVKCSFENLQRTGC*WMEPRR
Trigger: CCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTG...CAGGTTTTCAAAACTGCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp AGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTCAGAATTGACACGGTaGATGCTTAGTGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: RHGLRGSLPEAGPAGQVFSELTR*MLSVWI
Trigger: AATCCAGACACTAAGCATTCACCGTGTCAATTCTGA...AAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp GGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCTGGCTGTTGGGTGCCTaGGCTCCTCCAGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: GVSLLKMPTVNSLAQVKCWLLGA*APPGTG
Trigger: CCCTGTGCCTGGAGGAGCGCAGGCACCCAACAGCCA...GCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCACTCATTCAGTCCATTaGCTTAACACAAGCCTGATG +
Preference number: 4 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSTHSVH*LNTSLM
Trigger: CATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGT...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp TTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCATGGGGCCGTGGGGCTaGTGTTCTCACTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: LILRLNLGVQTPVEVICVMGPWG*CSHCTG
Trigger: GCCAGTGCAGTGAGAACAGCAGCCCCACGGCCCCAT...GACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CCTTTACTAAAGTCTTTACCTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCGTTTGCGCGGGTCTTTaGCGGAAGCCGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLLKSLPKTWQSLDTGKPVCAGL*RKPVLL
Trigger: CAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAAC...GGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAGGTAAAGACTTTAGTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR GCA 90 bp TATCTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCAGCAAGACATGGTTTaGGCGGGTCTTTGCCGGAAG +
Preference number: 4 (lower is better)
Translates to: YLTSSSSKRPRSSLCVPDQQDMV*AGLCRK
Trigger: CTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTG...GTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp TGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCGGCCGCAGCCCCCAGTaGCTCTCCTGGTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CLVSGFSCTSVYISDIELGRSPQ*LSWWSS
Trigger: GGAGGACCACCAGGAGAGGCACTGGGGGCTGCGGCC...GAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR GCA 90 bp GAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCAACCCAAGATAGCCAGTaGTGCTCCCAGGTGGTACTT +
Preference number: 4 (lower is better)
Translates to: ETKSWRSDSRRGHLCPGPTQDSQ*CSQVVL
Trigger: AAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGT...TGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp AAGAATCTCCCACCTGTGCTCATCTCTTGCTCCGGGATTCCCCTGAGCAACTGTGAGCTGCAGACAGTCTaGGAAGAATCTCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: KNLPPVLISCSGIPLSNCELQTV*EESPTC
Trigger: ACAGGTGGGAGATTCTTCGCAGACTGTCTGCAGCTC...ACAGTTGCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR GCA 90 bp GAAGAATCTCCCACCTGTGCTCATCTCTTGCTCCGGGATTCCCCTGAGCAACTGCACCTTAGCGTGAGCTaGAGACAGTCTGCGAAGAAT +
Preference number: 4 (lower is better)
Translates to: EESPTCAHLLLRDSPEQLHLSVS*RQSAKN
Trigger: ATTCTTCGCAGACTGTCTGCAGCTCACGCTAAGGTG...CAGTTGCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR CCA 90 bp GGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGATTTCTGTTTTCTAAAGCTGCTCAGTCAGGGTaGCCGTGTGGTGACGCATCC +
Preference number: 4 (lower is better)
Translates to: GRDLSVRLRLRCRFLFSKAAQSG*PCGDAS
Trigger: GGATGCGTCACCACACGGCCACCCTGACTGAGCAGC...TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp TTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCGCTGCTCAGTCAGGGTaGCCGTGTGGTGACGCATCC +
Preference number: 4 (lower is better)
Translates to: LILRLNLGVQTPVEVICVAAQSG*PCGDAS
Trigger: GGATGCGTCACCACACGGCCACCCTGACTGAGCAGC...GACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTTGCACAGGGGGTTTCTaGAAACGGCTCTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFCTGGF*KRLSPP
Trigger: TGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCA...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp CAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACGTTAGGGAAATGTTCTaGGTTCAGGCGCCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QVFYVSREMWHTPSRHFNVREMF*VQAPLP
Trigger: TGGGAGGGGCGCCTGAACCCAGAACATTTCCCTAAC...GTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp ATGTGGCACACGCCCTCGAGGCATTTTAACACTGCGCTTCAGGAAATCTCAAGTGGTGCTGGCCTTGGTTaGTTTCTCTCTGCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: MWHTPSRHFNTALQEISSGAGLG*FLSAPC
Trigger: ACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACC...ACTTGAGATTTCCTGAAGCGCAGTGTTAAAATGCCTCGAGGGCGTGTGCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACTTCCGACGGAGGTGCTaGCCTTGGTTGGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QVFYVSREMWHTPSRHFNFRRRC*PWLVSL
Trigger: GAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAA...GTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCGGGATTCTCAGACTGTaGACAGGAGTGTTTGTCATT +
Preference number: 4 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSGILRL*TGVFVI
Trigger: AATGACAAACACTCCTGTCCACAGTCTGAGAATCCC...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR CAA 72 bp CCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTaGAGACACTTGGGATTCTCAGACTTGACTAACCCA +
Preference number: 4 (lower is better)
Translates to: PVLLPGGTSGTV*RHLGFSDLTNP
Trigger: TGGGTTAGTCAAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650293.1
CDS-3UTR GCA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACCCTCCAAGGAGGCCCTaGGGTGAGACAGGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: HGECLVSGFSCTSVYISDPPRRP*GETGRG
Trigger: ACCGCGGCCTGTCTCACCGCAGGGCCTCCTTGGAGG...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCACTCATTCAGTCCATTaGCTTAACACAAGCCTGATG +
Preference number: 4 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSTHSVH*LNTSLM
Trigger: CATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGT...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGTGGTTGGTTTCTCTCTaGCCCGTGTGGTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: LEATLTCIEGVCAKCFRRWLVSL*PVWSSS
Trigger: ACTTGATGACCACACGGGGCAGAGAGAAACCAACCA...CCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAGACTGTCAAGATAGCCAGTGCTaGTCCCAGGTGGTACTTCTG +
Preference number: 4 (lower is better)
Translates to: LPGGTSGTVLRHLGFSDCQDSQC*SQVVLL
Trigger: CAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTG...ACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR GCA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTACCCAAGATAGCCAGTaGTGCTCCCAGGTGGTACTT +
Preference number: 4 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFTQDSQ*CSQVVL
Trigger: AAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGT...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGCGATGGGTCCACCTaGATGATGCTGACGTACTCC +
Preference number: 4 (lower is better)
Translates to: LKHGSRWTQESPPFVWPFRDGST*MMLTYS
Trigger: GGAGTACGTCAGCATCATCCAGGTGGACCCATCGCG...AAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp CCTTTACTAAAGTCTTTACCTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCCAGTGCCTCTCCTGGTaGTCCTCCCAGTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: PLLKSLPKTWQSLDTGKPQCLSW*SSQSRG
Trigger: CCCTCTAGACTGGGAGGACCACCAGGAGAGGCACTG...GGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAGGTAAAGACTTTAGTAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp TATCTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACAGTGCTGCTCCCAGGTaGTACTTCTGGTACCGTGTT +
Preference number: 4 (lower is better)
Translates to: YLTSSSSKRPRSSLCVPDSAAPR*YFWYRV
Trigger: AACACGGTACCAGAAGTACCACCTGGGAGCAGCACT...GTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp ACATGTATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGCATGGAAAGATGGTCTaGGGTATTAAGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: TCIRDGSTWMMLTYSSPRHGKMV*GIKITG
Trigger: GCCTGTAATCTTAATACCCCAGACCATCTTTCCATG...CCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGATACATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR GCA 90 bp AAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCAGTTTTGAAAACCTGATGGACAGCACCAGGTaGAGCAGTGAGATGACCCCC +
Preference number: 4 (lower is better)
Translates to: KMPTVNSLAQVKCSFENLMDSTR*SSEMTP
Trigger: GGGGGTCATCTCACTGCTGCACCTGGTGCTGTCCAT...CAGGTTTTCAAAACTGCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR GCA 90 bp TGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTCCTCCAGGCACAGGGTaGACAGGGGGTTTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: WTQESPPFVWPFRKVTHIPPGTG*TGGFWK
Trigger: TTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGG...AATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR GCA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTTGGTTGGTTTCTCTCTaGCCCGTGTGGTCATCAAGT +
Preference number: 4 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFWLVSL*PVWSSS
Trigger: ACTTGATGACCACACGGGGCAGAGAGAAACCAACCA...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp GTCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTGATGGATCGTCTCAGGCTGAGATaGAGATTTCTGTTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: VARAWPEHSEAKDWVLMDRLRLR*RFLFSK
Trigger: TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACG...ATCCATCAGCACCCAGTCCTTTGCTTCACTGTGCTCTGGCCAAGCGCGTGCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR GCA 90 bp TGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTGACCTGGCTCGTGAGTaGGTCTGGGTCAGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: WTQESPPFVWPFRKVTHIDLARE*VWVRKR
Trigger: TCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTC...AATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR GCA 90 bp CTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCAAAAGGTGACCCATATTaGACAGCAGAACATCACAGC +
Preference number: 4 (lower is better)
Translates to: LTSSSSKRPRSSLCVPDPKGDPY*TAEHHS
Trigger: GCTGTGATGTTCTGCTGTGCAATATGGGTCACCTTT...TGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTGACCCTGAGGGGATCTaGCCTCAGCGCCTGGTACGT +
Preference number: 4 (lower is better)
Translates to: LRFRKSQVPSCVSNVPTFDPEGI*PQRLVR
Trigger: ACGTACCAGGCGCTGAGGCCAGATCCCCTCAGGGTC...AAATGTGGGTACGTTACTAACACAAGATGGAACTTGAGATTTCCTGAAGCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288774.8
CDS-3UTR CCA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACCCTCCCATGGGGCCGTaGGGCTGCTGTTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: HGECLVSGFSCTSVYISDPPMGP*GCCSHC
Trigger: GCAGTGAGAACAGCAGCCCCACGGCCCCATGGGAGG...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp TTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCGTGGTCATCAAGTCCTaGGGGATGTGCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LILRLNLGVQTPVEVICVVVIKS*GMCSAQ
Trigger: CTGGGCAGAGCACATCCCCCAGGACTTGATGACCAC...GACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp TGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTGTGGTCATCAAGTCCTaGGGGATGTGCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: WTQESPPFVWPFRKVTHIVVIKS*GMCSAQ
Trigger: CTGGGCAGAGCACATCCCCCAGGACTTGATGACCAC...AATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp TTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCGCTCGTGAGTGCGTCTaGGTCAGGAAGAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: LILRLNLGVQTPVEVICVARECV*VRKRPL
Trigger: GAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGC...GACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp GGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGATTTCTGTTTTCTAAAGGAAGCCGGTCCTGCTaGCCAGGTGTTTTACGTCAG +
Preference number: 4 (lower is better)
Translates to: GRDLSVRLRLRCRFLFSKGSRSC*PGVLRQ
Trigger: CTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCC...TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGCCCACCTTTTGTTTaGCCTTTTCGAAAGGTGACC +
Preference number: 4 (lower is better)
Translates to: LEATLTCIEGVCAKCFRRSPPFV*PFRKVT
Trigger: GGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCT...CCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp TCTGCGAAGAATCTCCCACCTGTGCTCATCTCTTGCTCCGGGATTCCCCTGAGCGCTGTGAGGTCTTTCTaGAATCTCAATTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: SAKNLPPVLISCSGIPLSAVRSF*NLNLLI
Trigger: GATGAGCAAATTGAGATTCCAGAAAGACCTCACAGC...GCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCTTCGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514502.1
3UTR CAA 72 bp CTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTaGGGATTCTCAGACTGTGGACAGGAGTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LPGGTSGTVLRH*GFSDCGQECLS
Trigger: TGACAAACACTCCTGTCCACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR CAA 72 bp TGGCAGTCGCTGGACACAGGAAAGCCCACCTTTTGTTaGGCCTTTTCGAAAGGTGACCCATATTGCACAGCA +
Preference number: 4 (lower is better)
Translates to: WQSLDTGKPTFC*AFSKGDPYCTA
Trigger: TGCTGTGCAATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCAGCGACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp AAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCAGTTTTGAAAACCTGAGCCTGCAAGTGTGGTaGGGCCAAAGTAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: KMPTVNSLAQVKCSFENLSLQVW*GQSRPH
Trigger: ATGTGGCCTACTTTGGCCTCACCACACTTGCAGGCT...CAGGTTTTCAAAACTGCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR TCA 90 bp CTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAGACTGTGACCTTGACGTGTATTaGAGGTGTGTGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: LPGGTSGTVLRHLGFSDCDLDVY*RCVCQM
Trigger: CATTTGGCACACACACCTTCAATACACGTCAAGGTC...ACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp TGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCCAGGACCTGGCTCGTaGGTGCGTCTGGGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: CLVSGFSCTSVYISDIELPGPGS*VRLGQE
Trigger: TTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGG...GAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACCCAGGACCTGGCTCGTaGGTGCGTCTGGGTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HGECLVSGFSCTSVYISDPGPGS*VRLGQE
Trigger: TTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGG...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp TGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCAAAGGACTGGGTGCTaGTGGATGGAGCCACGGCGG +
Preference number: 4 (lower is better)
Translates to: CLVSGFSCTSVYISDIELQRTGC*WMEPRR
Trigger: CCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTG...GAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTCTCAGGCCTAAGGTGTaGCAGGAAGTCGCACGCGCT +
Preference number: 4 (lower is better)
Translates to: LRFRKSQVPSCVSNVPTFLRPKV*QEVARA
Trigger: AGCGCGTGCGACTTCCTGTCACACCTTAGGCCTGAG...AAATGTGGGTACGTTACTAACACAAGATGGAACTTGAGATTTCCTGAAGCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp TGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACACTGCTTCTGGTACCGTGTTaGGACACTTGGGATTCTCAG +
Preference number: 4 (lower is better)
Translates to: CFTSAGKCGTRPRGILTLLLVPC*DTWDSQ
Trigger: CTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAG...CAGTGTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp CCTTTACTAAAGTCTTTACCTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCAGCTGTGGTCCCAGATaGGACACTGACATGCGAGTG +
Preference number: 4 (lower is better)
Translates to: PLLKSLPKTWQSLDTGKPSCGPR*DTDMRV
Trigger: CACTCGCATGTCAGTGTCTCATCTGGGACCACAGCT...GGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAGGTAAAGACTTTAGTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTTGGGATTCTCAGACTTaGCTAACCCAGGAATACAGG +
Preference number: 4 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFWDSQT*LTQEYR
Trigger: CCTGTATTCCTGGGTTAGTCAAGTCTGAGAATCCCA...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650293.1
CDS-3UTR GCA 90 bp GGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGATTTCTGTTTTCTAAACAGGGTCTGGTAGCCTaGAAGTGTGGTGAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GRDLSVRLRLRCRFLFSKQGLVA*KCGEAK
Trigger: TTTGGCCTCACCACACTTGCAGGCTACCAGACCCTG...TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATGGGGCCGTGGGGCTaGTGTTCTCACTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: HGECLVSGFSCTSVYISDMGPWG*CSHCTG
Trigger: GCCAGTGCAGTGAGAACAGCAGCCCCACGGCCCCAT...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACGCTGCTCAGTCAGGGTaGCCGTGTGGTGACGCATCC +
Preference number: 4 (lower is better)
Translates to: HGECLVSGFSCTSVYISDAAQSG*PCGDAS
Trigger: GGATGCGTCACCACACGGCCACCCTGACTGAGCAGC...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp TGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTTGCACAGGGGGTTTCTaGAAACGGCTCTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WTQESPPFVWPFRKVTHICTGGF*KRLSPP
Trigger: TGGAGGAGAGAGCCGTTTCCAGAAACCCCCTGTGCA...AATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp CTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAGACTGTCCTGAGACTAAATCTTaGCGTTCAGACTCCCGTAGA +
Preference number: 4 (lower is better)
Translates to: LPGGTSGTVLRHLGFSDCPETKS*RSDSRR
Trigger: TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGG...ACAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp TTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCTTCCGACGGAGGTGCTaGCCTTGGTTGGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LILRLNLGVQTPVEVICVFRRRC*PWLVSL
Trigger: GAGAGAAACCAACCAAGGCCAGCACCTCCGTCGGAA...GACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CCA 90 bp GACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTGCAGTGAAGCAAAGGACTaGGTGCTGATGGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: DTGKPTFCLAFSKGDPYCSEAKD*VLMDGA
Trigger: GGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACT...GCAATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
3UTR CAA 72 bp CTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTaGGGATTCTCAGACTTGACTAACCCAGGAATACAG +
Preference number: 4 (lower is better)
Translates to: LPGGTSGTVLRH*GFSDLTNPGIQ
Trigger: CTGTATTCCTGGGTTAGTCAAGTCTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650293.1
CDS-3UTR GCA 90 bp CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTCCTCCAGGCACAGGGTaGACAGGGGGTTTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LRFRKSQVPSCVSNVPTFPPGTG*TGGFWK
Trigger: TTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGG...AAATGTGGGTACGTTACTAACACAAGATGGAACTTGAGATTTCCTGAAGCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCCTGGAAACATCAAATaGAGGCGGGAAATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKHGSRWTQESPPFVWPFPGNIK*RREIGW
Trigger: CCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG...AAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp TTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCAAAGTAGGCCACATCTaGGAGCAGCTCAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: LILRLNLGVQTPVEVICVKVGHI*EQLNLL
Trigger: AAGGAGGTTGAGCTGCTCTCAGATGTGGCCTACTTT...GACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTAGTGCCGAAGGTAGATaGGCTTCTGGGGAGGGAACT +
Preference number: 4 (lower is better)
Translates to: LRFRKSQVPSCVSNVPTFSAEGR*ASGEGT
Trigger: AGTTCCCTCCCCAGAAGCTCATCTACCTTCGGCACT...AAATGTGGGTACGTTACTAACACAAGATGGAACTTGAGATTTCCTGAAGCGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp GAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACTTCTGGCCTACTTCTaGATTACTTCTCAACTGTAT +
Preference number: 4 (lower is better)
Translates to: ETKSWRSDSRRGHLCPGPLLAYF*ITSQLY
Trigger: ATACAGTTGAGAAGTAATTCAGAAGTAGGCCAGAAG...TGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp TGTGCAAGCAAGGTTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGCCTTTTCGAAAGGTaGCCCATATTGCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: CASKVNPETKSWRSDSRRGLFER*PILHSR
Trigger: TCTGCTGTGCAATATGGGTCACCTTTCGAAAAGGCC...TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAACCTTGCTTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR GCA 90 bp TGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCATGGACAGCACCAGGTaGAGCAGTGAGATGACCCCC +
Preference number: 4 (lower is better)
Translates to: CLVSGFSCTSVYISDIELMDSTR*SSEMTP
Trigger: GGGGGTCATCTCACTGCTGCACCTGGTGCTGTCCAT...GAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp TATCTGACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCTGGCGCAGGTTAAATaGAGTTTTGAAAACCTGGAA +
Preference number: 4 (lower is better)
Translates to: YLTSSSSKRPRSSLCVPDLAQVK*SFENLE
Trigger: TTCCAGGTTTTCAAAACTGCATTTAACCTGCGCCAG...GTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp TGTGCAAGCAAGGTTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGACCTGGAAACATCAAATaGAGGCGGGAAATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CASKVNPETKSWRSDSRRPGNIK*RREIGW
Trigger: CCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG...TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAACCTTGCTTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR TCA 90 bp CAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACCTTCTGGCCTACTTCTaGATTACTTCTCAACTGTAT +
Preference number: 4 (lower is better)
Translates to: QVFYVSREMWHTPSRHFNLLAYF*ITSQLY
Trigger: ATACAGTTGAGAAGTAATTCAGAAGTAGGCCAGAAG...GTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp CCTTTACTAAAGTCTTTACCTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCGACCTTGACGTGTATTaGAGGTGTGTGTGCCAAATG +
Preference number: 4 (lower is better)
Translates to: PLLKSLPKTWQSLDTGKPDLDVY*RCVCQM
Trigger: CATTTGGCACACACACCTTCAATACACGTCAAGGTC...GGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAGGTAAAGACTTTAGTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp CCTTTACTAAAGTCTTTACCTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCAACTGGAAGCGACCTTaGCGTGTATTGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PLLKSLPKTWQSLDTGKPNWKRP*RVLKVC
Trigger: ACACACCTTCAATACACGTCAAGGTCGCTTCCAGTT...GGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAGGTAAAGACTTTAGTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp TGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTCTGTGCGTCTCAGGCTaGGATGCAGATTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: WTQESPPFVWPFRKVTHILCVSG*DADFCF
Trigger: AAAACAGAAATCTGCATCTCAGCCTGAGACGCACAG...AATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp TGTGCAAGCAAGGTTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGACTGTGCGTCTCAGGCTaGGATGCAGATTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: CASKVNPETKSWRSDSRRLCVSG*DADFCF
Trigger: AAAACAGAAATCTGCATCTCAGCCTGAGACGCACAG...TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAACCTTGCTTGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR TCA 90 bp GGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCCTTCTGGTACCGTGTTaGGACACTTGGGATTCTCAG +
Preference number: 4 (lower is better)
Translates to: GVSLLKMPTVNSLAQVKCLLVPC*DTWDSQ
Trigger: CTGAGAATCCCAAGTGTCTCAACACGGTACCAGAAG...GCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp TGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACACTGTCAGAATTGACACGGTaGATGCTTAGTGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: CFTSAGKCGTRPRGILTLSELTR*MLSVWI
Trigger: AATCCAGACACTAAGCATTCACCGTGTCAATTCTGA...CAGTGTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp TGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCTGCTTCCGACGGAGGTaGTGGCCTTGGTTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: CLVSGFSCTSVYISDIELCFRRR*WPWLVS
Trigger: AGAAACCAACCAAGGCCAGCACCTCCGTCGGAAGCA...GAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp GGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCTCAAACAGCAAGACATaGTTTGCGCGGGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GVSLLKMPTVNSLAQVKCSNSKT*FARVFA
Trigger: GGCAAAGACCCGCGCAAACCATGTCTTGCTGTTTGA...GCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp GACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTGCTCTTTACCTAAAACATaGCAGTCGCTGGACACAGGA +
Preference number: 4 (lower is better)
Translates to: DTGKPTFCLAFSKGDPYCSLPKT*QSLDTG
Trigger: TCCTGTGTCCAGCGACTGCCATGTTTTAGGTAAAGA...GCAATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTGGCCTTTTCGAAAGGTaGCCCATATTGCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: LRFRKSQVPSCVSNVPTFGLFER*PILHSR
Trigger: TCTGCTGTGCAATATGGGTCACCTTTCGAAAAGGCC...AAATGTGGGTACGTTACTAACACAAGATGGAACTTGAGATTTCCTGAAGCGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR GCA 90 bp CTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTACTCATTCAGTCCATTaGCTTAACACAAGCCTGATG +
Preference number: 4 (lower is better)
Translates to: LKHGSRWTQESPPFVWPFTHSVH*LNTSLM
Trigger: CATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGT...AAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp GGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCCCTGAGACTAAATCTTaGCGTTCAGACTCCCGTAGA +
Preference number: 4 (lower is better)
Translates to: GVSLLKMPTVNSLAQVKCPETKS*RSDSRR
Trigger: TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGG...GCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CCA 90 bp CCTTTACTAAAGTCTTTACCTAAAACATGGCAGTCGCTGGACACAGGAAAGCCCGGGATTCTCAGACTGTaGACAGGAGTGTTTGTCATT +
Preference number: 4 (lower is better)
Translates to: PLLKSLPKTWQSLDTGKPGILRL*TGVFVI
Trigger: AATGACAAACACTCCTGTCCACAGTCTGAGAATCCC...GGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTAGGTAAAGACTTTAGTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CCA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACAAACATGGCAGTCGCTaGACACAGGAAAGCCCACCT +
Preference number: 4 (lower is better)
Translates to: HGECLVSGFSCTSVYISDKHGSR*TQESPP
Trigger: AGGTGGGCTTTCCTGTGTCCAGCGACTGCCATGTTT...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACAAAGTAGGCCACATCTaGGAGCAGCTCAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: HGECLVSGFSCTSVYISDKVGHI*EQLNLL
Trigger: AAGGAGGTTGAGCTGCTCTCAGATGTGGCCTACTTT...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp GGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGATTTCTGTTTTCTAAACTGGCGCAGGTTAAATaGAGTTTTGAAAACCTGGAA +
Preference number: 4 (lower is better)
Translates to: GRDLSVRLRLRCRFLFSKLAQVK*SFENLE
Trigger: TTCCAGGTTTTCAAAACTGCATTTAACCTGCGCCAG...TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CCA 90 bp GGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCTCTTTACCTAAAACATaGCAGTCGCTGGACACAGGA +
Preference number: 4 (lower is better)
Translates to: GVSLLKMPTVNSLAQVKCSLPKT*QSLDTG
Trigger: TCCTGTGTCCAGCGACTGCCATGTTTTAGGTAAAGA...GCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR TCA 90 bp TGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCAACTGGAAGCGACCTTaGCGTGTATTGAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: CLVSGFSCTSVYISDIELNWKRP*RVLKVC
Trigger: ACACACCTTCAATACACGTCAAGGTCGCTTCCAGTT...GAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR GCA 90 bp TTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCGTCTCAGGCTGAGATaGAGATTTCTGTTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: LILRLNLGVQTPVEVICVRLRLR*RFLFSK
Trigger: TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACG...GACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp TGTGCAAGCAAGGTTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGACGTCTCAGGCTGAGATaGAGATTTCTGTTTTCTAAA +
Preference number: 4 (lower is better)
Translates to: CASKVNPETKSWRSDSRRRLRLR*RFLFSK
Trigger: TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACG...TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAACCTTGCTTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR GCA 90 bp CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTAAAGGTGACCCATATTaGACAGCAGAACATCACAGC +
Preference number: 4 (lower is better)
Translates to: LRFRKSQVPSCVSNVPTFKGDPY*TAEHHS
Trigger: GCTGTGATGTTCTGCTGTGCAATATGGGTCACCTTT...AAATGTGGGTACGTTACTAACACAAGATGGAACTTGAGATTTCCTGAAGCGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR TCA 90 bp CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTTCAGAATTGACACGGTaGATGCTTAGTGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: LRFRKSQVPSCVSNVPTFSELTR*MLSVWI
Trigger: AATCCAGACACTAAGCATTCACCGTGTCAATTCTGA...AAATGTGGGTACGTTACTAACACAAGATGGAACTTGAGATTTCCTGAAGCGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS TCA 90 bp CCAGGCCCACCCGGGCGCCGGCTCAGCGGTAGTGCCGAAGGTAGATaGGCTTCTGGGGAGGGAACTTCTCCCGGCAGAGGGGACACTCCG +
Preference number: 5 (lower is better)
Translates to: PGPPGRRLSGSAEGR*ASGEGTSPGRGDTP
Trigger: CGGAGTGTCCCCTCTGCCGGGAGAAGTTCCCTCCCCAGAAGCTCATCTACCTTCGGCACTACCGCTGAGCCGGCGCCCGGGTGGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS CCA 90 bp GCCTTGCTGCTGCACCACGCGGTGATGCACTCCCAGCAGAACAGGTaGCCGCAGGGCGTGGCTGTTGGGTGCCTGCGCTCCTCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: ALLLHHAVMHSQQNR*PQGVAVGCLRSSRH
Trigger: GTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACCTGTTCTGCTGGGAGTGCATCACCGCGTGGTGCAGCAGCAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS CCA 90 bp GTGACGCAGCCACATCTGTCTCCCGCCCACCGAGCACACTCTCCATaGCGGCAGGATGCCCGGGGCGAGCCCCTCGTAGGGAACCAGGCT +
Preference number: 5 (lower is better)
Translates to: VTQPHLSPAHRAHSP*RQDARGEPLVGNQA
Trigger: AGCCTGGTTCCCTACGAGGGGCTCGCCCCGGGCATCCTGCCGCCATGGAGAGTGTGCTCGGTGGGCGGGAGACAGATGTGGCTGCGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515760.1
CDS-3UTR CAA 90 bp GAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGCCGGCAGAGGGGACACTaGCTGCTGCACCACGCGGTG +
Preference number: 5 (lower is better)
Translates to: EGLNTAVTVGQQVACPAGRQRGH*LLHHAV
Trigger: CACCGCGTGGTGCAGCAGCAAGTGTCCCCTCTGCCG...GCCTGCTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507596.5
CDS TCA 90 bp CCAGGCCCACCCGGGCGCCGGCTCAGCGGTAGTGCCGAAGGTAGATaGGCTTCTGGGGAGGGAACTTCTCCCGGCAGAGGGGACACTTGC +
Preference number: 5 (lower is better)
Translates to: PGPPGRRLSGSAEGR*ASGEGTSPGRGDTC
Trigger: GCAAGTGTCCCCTCTGCCGGGAGAAGTTCCCTCCCCAGAAGCTCATCTACCTTCGGCACTACCGCTGAGCCGGCGCCCGGGTGGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507596.5
CDS CCA 90 bp CACTTGCTGCTGCACCACGCGGTGATGCACTCCCAGCAGAACAGGTaGCCGCAGGGCGTGGCTGTTGGGTGCCTGCGCTCCTCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: HLLLHHAVMHSQQNR*PQGVAVGCLRSSRH
Trigger: GTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACCTGTTCTGCTGGGAGTGCATCACCGCGTGGTGCAGCAGCAAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507596.5
CDS-3UTR CAA 90 bp CGAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAAGGGGACACTCCGCCTaGCTGCTGCACCACGCGGTG +
Preference number: 5 (lower is better)
Translates to: RAEGLNTAVTVGQQVACPRGHSA*LLHHAV
Trigger: CACCGCGTGGTGCAGCAGCAAGGCGGAGTGTCCCCT...TGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGGGTTTGCGCGGGTCTTaGCCGGAAGCCGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRGLRGS*PEAGPA
Trigger: AGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACC...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS GCA 90 bp ACTCCCAGCAGAACAGGTGGCCGCAGGGCGTGGCTGTTGGGTGCCTaGGCTCCTCCAGGCACAGGGTGCACAGGGGGTTTCTGGAAACGG +
Preference number: 5 (lower is better)
Translates to: TPSRTGGRRAWLLGA*APPGTGCTGGFWKR
Trigger: CCGTTTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACCTGTTCTGCTGGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS CCA 90 bp GGTGATGCACTCCCAGCAGAACAGGTGGCCGCAGGGCGTGGCTGTTaGGTGCCTGCGCTCCTCCAGGCACAGGGTGCACAGGGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: GDALPAEQVAAGRGC*VPALLQAQGAQGVS
Trigger: AGAAACCCCCTGTGCACCCTGTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACCTGTTCTGCTGGGAGTGCATCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CAA 90 bp TGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAGCGGTTTGCGCGGGTCTTaGCCGGAAGCCGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: CGHQVLGDVLCPAALGESGLRGS*PEAGPA
Trigger: AGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACC...GCTCTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS GCA 90 bp ATGCACTCCCAGCAGAACAGGTGGCCGCAGGGCGTGGCTGTTGGGTaGCTGCGCTCCTCCAGGCACAGGGTGCACAGGGGGTTTCTGGAA +
Preference number: 5 (lower is better)
Translates to: MHSQQNRWPQGVAVG*LRSSRHRVHRGFLE
Trigger: TTCCAGAAACCCCCTGTGCACCCTGTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACCTGTTCTGCTGGGAGTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CAA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGACGGAGGTGCTGGCCTaGGTTGGTTTCTCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRTEVLA*VGFSLP
Trigger: GGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGT...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CAA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGAGGGGACACTCCGCCTaGCTGCTGCACCACGCGGTG +
Preference number: 5 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLRGHSA*LLHHAV
Trigger: CACCGCGTGGTGCAGCAGCAAGGCGGAGTGTCCCCT...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCAGGGGACACTCCGCCTaGCTGCTGCACCACGCGGTG +
Preference number: 5 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSRGHSA*LLHHAV
Trigger: CACCGCGTGGTGCAGCAGCAAGGCGGAGTGTCCCCT...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CAA 90 bp TGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACCCGGGCGCCGGAGGCCACGTTCAAGCTaGTGTGTCCCTGACCCAAGA +
Preference number: 5 (lower is better)
Translates to: WRSDSRRGHLCPGPPGRRRPRSS*CVPDPR
Trigger: TCTTGGGTCAGGGACACACAAGCTTGAACGTGGCCT...CCGGCGCCCGGGTGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CAA 90 bp CAGTGTCACCAGCACGCCACGGCGCAGCGAGGAGGGCACATGTATCCGCGATGGACCTGTGCTCATCTCTaGCTCCGGGATTCCCCTGAG +
Preference number: 5 (lower is better)
Translates to: QCHQHATAQRGGHMYPRWTCAHL*LRDSPE
Trigger: CTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGT...CCATCGCGGATACATGTGCCCTCCTCGCTGCGCCGTGGCGTGCTGGTGACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS TCA 90 bp GAAACCGTACAGCTGCAGCCCCATGGACAGCACCAGGTGCAGCAGTaGGATGACCCCCAGCAGCCTGTAGCTAACACGGGCCCTCAGGTC +
Preference number: 5 (lower is better)
Translates to: ETVQLQPHGQHQVQQ*DDPQQPVANTGPQV
Trigger: GACCTGAGGGCCCGTGTTAGCTACAGGCTGCTGGGGGTCATCTCACTGCTGCACCTGGTGCTGTCCATGGGGCTGCAGCTGTACGGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000510434.1
ENST00000650293.1
CDS-3UTR CAA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCACGGAGGTGCTGGCCTaGGTTGGTTTCTCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSTEVLA*VGFSLP
Trigger: GGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGT...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CAA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTACAGCAAGACATGGTTaGCGCGGGTCTTTGCCGGAA +
Preference number: 5 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRITARHG*RGSLPE
Trigger: TTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGT...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CAA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGAGGCCACGTTCAAGCTaGTGTGTCCCTGACCCAAGA +
Preference number: 5 (lower is better)
Translates to: PQDLARECVWVRKRPLCARPRSS*CVPDPR
Trigger: TCTTGGGTCAGGGACACACAAGCTTGAACGTGGCCT...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS TCA 90 bp CCTCGTAGGGAACCAGGCTGGCACTCGGTGGTCCTTGCTACATGCTaGGCTGGGGTTGGGAGCCTGAGAGCTTCTGTCAACAACTCCCTC +
Preference number: 5 (lower is better)
Translates to: PRREPGWHSVVLATC*AGVGSLRASVNNSL
Trigger: GAGGGAGTTGTTGACAGAAGCTCTCAGGCTCCCAACCCCAGCTCAGCATGTAGCAAGGACCACCGAGTGCCAGCCTGGTTCCCTACGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515760.1
CDS-3UTR CAA 90 bp CTGAGTCCTACCAGGTTGGGGTTAGGGAAATGTTCTGGGTTCAGGCGCCCCTCCACGGAGGTGCTGGCCTaGGTTGGTTTCTCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: LSPTRLGLGKCSGFRRPSTEVLA*VGFSLP
Trigger: GGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGT...GGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CAA 90 bp GAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGACGGAGGTGCTGGCCTaGGTTGGTTTCTCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: ECVWVRKRPLCASQAEMQTEVLA*VGFSLP
Trigger: GGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGT...CTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CAA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAAAACTGGAAGCGACCTaGACGTGTATTGAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGKLEAT*TCIEGV
Trigger: CACACCTTCAATACACGTCAAGGTCGCTTCCAGTTT...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CAA 90 bp TGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAGAGCTCTGGCAAGCTGACCTaGACTAACCCAGGAATACAG +
Preference number: 5 (lower is better)
Translates to: CGHQVLGDVLCPAALGESSGKLT*TNPGIQ
Trigger: CTGTATTCCTGGGTTAGTCAAGGTCAGCTTGCCAGA...GCTCTCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp GAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGCAGGAAAGCCCACCTTTaGTTTGGCCTTTTCGAAAGG +
Preference number: 5 (lower is better)
Translates to: EGLNTAVTVGQQVACPAGRKAHL*FGLFER
Trigger: CCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCT...GCCTGCTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp TGCGAAGAATCTCCCACCTGTGCTCATCTCTTGCTCCGGGATTCCCCTGAGCAACCACCGTCCCCAGACTaGGTGTGTGTGGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: CEESPTCAHLLLRDSPEQPPSPD*VCVAAL
Trigger: GAGGGCAGCCACACACACCAAGTCTGGGGACGGTGG...TTGCTCAGGGGAATCCCGGAGCAAGAGATGAGCACAGGTGGGAGATTCTTCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502666.1
CDS-3UTR CAA 90 bp CCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGACCGTGTTGAGACACTaGGGATTCTCAGACTGTGGA +
Preference number: 5 (lower is better)
Translates to: PQDLARECVWVRKRPLCATVLRH*GFSDCG
Trigger: TCCACAGTCTGAGAATCCCAAGTGTCTCAACACGGT...CGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp GGCCCCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTTCCTGTCTCAGAATTACCGTGTTGAGACACTaGGGATTCTCAGACTTGACT +
Preference number: 5 (lower is better)
Translates to: GPGLRRLLTLGGVSCLRITVLRH*GFSDLT
Trigger: AGTCAAGTCTGAGAATCCCAAGTGTCTCAACACGGT...AATTCTGAGACAGGAAACACCGCCCAGAGTGAGGAGCCTGCGCAGCCCGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650293.1
CDS-3UTR CAA 90 bp CCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGGGCTGAAACTGGAAGCGACCTaGACGTGTATTGAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: PGNIKWRREIGWGRAEGLKLEAT*TCIEGV
Trigger: CACACCTTCAATACACGTCAAGGTCGCTTCCAGTTT...CAGCCCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
CDS-3UTR CAA 90 bp GTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCAAACTGGAAGCGACCTaGACGTGTATTGAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: VSLCPVWSSSPGGCALPSKLEAT*TCIEGV
Trigger: CACACCTTCAATACACGTCAAGGTCGCTTCCAGTTT...GCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CAA 90 bp GAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGCTGTGGACAGGAGTGTTaGTCATTTTTCATACTGTTT +
Preference number: 5 (lower is better)
Translates to: EGLNTAVTVGQQVACPAGCGQEC*SFFILF
Trigger: AAACAGTATGAAAAATGACAAACACTCCTGTCCACA...GCCTGCTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp CCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAAGTGTCTGGATTTTCTaGTACCAGTGTTTACATATC +
Preference number: 5 (lower is better)
Translates to: PVWSSSPGGCALPSRPRGSVWIF*YQCLHI
Trigger: GATATGTAAACACTGGTACAAGAAAATCCAGACACT...TCCCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS CCA 90 bp CGGCTGCTTGCTCTGCCGGTCTGGAAAATGCTCTTCCCTAAGACGTaGTCTTTATCTCTGAGAGCCCCTCACTTCCCAAGATGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: RLLALPVWKMLFPKT*SLSLRAPHFPRCSV
Trigger: CACAGAGCATCTTGGGAAGTGAGGGGCTCTCAGAGATAAAGACCACGTCTTAGGGAAGAGCATTTTCCAGACCGGCAGAGCAAGCAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515760.1
CDS-3UTR CAA 90 bp TGTGCAAGCAAGGTTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTTTGCGCGGGTCTTaGCCGGAAGCCGGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: CASKVNPETKSWRSDSRRGLRGS*PEAGPA
Trigger: AGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACC...TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAACCTTGCTTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CAA 90 bp GAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCAACAGCAAGACATGGTTaGCGCGGGTCTTTGCCGGAA +
Preference number: 5 (lower is better)
Translates to: ETKSWRSDSRRGHLCPGPTARHG*RGSLPE
Trigger: TTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGT...TGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CAA 90 bp GTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAACAGCAAGACATGGTTaGCGCGGGTCTTTGCCGGAA +
Preference number: 5 (lower is better)
Translates to: VLLPGGTSGTVLRHLGFSTARHG*RGSLPE
Trigger: TTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGT...TGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS CCA 90 bp CCCCTGAGCAACTGTTCTAGGGCCTATGAGGGCCACATGGAAAGATaGTCTGGGGTATTAAGATTACAGGCCAGAGGCCAACTGTCTAGC +
Preference number: 5 (lower is better)
Translates to: PLSNCSRAYEGHMER*SGVLRLQARGQLSS
Trigger: GCTAGACAGTTGGCCTCTGGCCTGTAATCTTAATACCCCAGACCATCTTTCCATGTGGCCCTCATAGGCCCTAGAACAGTTGCTCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502666.1
ENST00000514502.1
CDS-3UTR CAA 90 bp GAGACTAAATCTTGGCGTTCAGACTCCCGTAGAGGTCATCTGTGTCCAGGCCCACTGAGTCCTACCAGGTaGGGGTTAGGGAAATGTTCT +
Preference number: 5 (lower is better)
Translates to: ETKSWRSDSRRGHLCPGPLSPTR*GLGKCS
Trigger: AGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG...TGGGCCTGGACACAGATGACCTCTACGGGAGTCTGAACGCCAAGATTTAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS-3UTR CAA 90 bp ATCCGCGATGGGTCCACCTGGATGATGCTGACGTACTCCTCCCCCAGGGTCTGGTTCTGGAATCTCAATTaGCTCATCTATCAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: IRDGSTWMMLTYSSPRVWFWNLN*LIYQKS
Trigger: ACTCTTCTGATAGATGAGCAAATTGAGATTCCAGAA...CCAGACCCTGGGGGAGGAGTACGTCAGCATCATCCAGGTGGACCCATCGCGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514502.1
CDS-3UTR CAA 90 bp GTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGATTCTCAAAACTGGAAGCGACCTaGACGTGTATTGAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: VLLPGGTSGTVLRHLGFSKLEAT*TCIEGV
Trigger: CACACCTTCAATACACGTCAAGGTCGCTTCCAGTTT...TGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CAA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTTCTGGCAAGCTGACCTaGACTAACCCAGGAATACAG +
Preference number: 5 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFSGKLT*TNPGIQ
Trigger: CTGTATTCCTGGGTTAGTCAAGGTCAGCTTGCCAGA...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp GAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGTGTGGACAGGAGTGTTaGTCATTTTTCATACTGTTT +
Preference number: 5 (lower is better)
Translates to: ECVWVRKRPLCASQAEMQCGQEC*SFFILF
Trigger: AAACAGTATGAAAAATGACAAACACTCCTGTCCACA...CTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp TGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTAGGCCACGTTCAAGCTaGTGTGTCCCTGACCCAAGA +
Preference number: 5 (lower is better)
Translates to: WTQESPPFVWPFRKVTHIRPRSS*CVPDPR
Trigger: TCTTGGGTCAGGGACACACAAGCTTGAACGTGGCCT...AATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp GACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTGCCTGAGTCCTACCAGGTaGGGGTTAGGGAAATGTTCT +
Preference number: 5 (lower is better)
Translates to: DTGKPTFCLAFSKGDPYCLSPTR*GLGKCS
Trigger: AGAACATTTCCCTAACCCCAACCTGGTAGGACTCAG...GCAATATGGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp TGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTTAACACTGAAGCCCACCTTTTGTTaGGCCTTTTCGAAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: CFTSAGKCGTRPRGILTLKPTFC*AFSKGD
Trigger: GTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTT...CAGTGTTAAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp GGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGATTTCTGTTTTCTAAAACCGTGTTGAGACACTaGGGATTCTCAGACTGTGGA +
Preference number: 5 (lower is better)
Translates to: GRDLSVRLRLRCRFLFSKTVLRH*GFSDCG
Trigger: TCCACAGTCTGAGAATCCCAAGTGTCTCAACACGGT...TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp GGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGATTTCTGTTTTCTAAAAGGAAAGCCCACCTTTaGTTTGGCCTTTTCGAAAGG +
Preference number: 5 (lower is better)
Translates to: GRDLSVRLRLRCRFLFSKRKAHL*FGLFER
Trigger: CCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCT...TTTAGAAAACAGAAATCTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS-3UTR CAA 90 bp CCAGCACGCACTCATTCAGTCCATTGCCTTAACACAAGCCTGATGGGGCTGTTTAGTGTCTGGATTTTCTaGTACCAGTGTTTACATATC +
Preference number: 5 (lower is better)
Translates to: PARTHSVHCLNTSLMGLFSVWIF*YQCLHI
Trigger: GATATGTAAACACTGGTACAAGAAAATCCAGACACT...AAACAGCCCCATCAGGCTTGTGTTAAGGCAATGGACTGAATGAGTGCGTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CAA 90 bp GGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCAAGCCCACCTTTTGTTaGGCCTTTTCGAAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: GVSLLKMPTVNSLAQVKCKPTFC*AFSKGD
Trigger: GTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTT...GCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288774.8
ENST00000447513.7
CDS TCA 90 bp GCCAACTGTCTAGCATCAAAAAGCAGCTCTCCAACTTGCTGGCTGTaGGGTCTTTCTGGAATCTCAATTTGCTCATCTATCAGAAGAGTA +
Preference number: 5 (lower is better)
Translates to: ANCLASKSSSPTCWL*GLSGISICSSIRRV
Trigger: TACTCTTCTGATAGATGAGCAAATTGAGATTCCAGAAAGACCTCACAGCCAGCAAGTTGGAGAGCTGCTTTTTGATGCTAGACAGTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514502.1
CDS-3UTR CAA 90 bp CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTACTTCTGGTACCGTGTaGAGACACTTGGGATTCTCA +
Preference number: 5 (lower is better)
Translates to: LRFRKSQVPSCVSNVPTFTSGTV*RHLGFS
Trigger: TGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGT...AAATGTGGGTACGTTACTAACACAAGATGGAACTTGAGATTTCCTGAAGCGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CAA 90 bp GGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCTGGCGCAGGTTAAATGCTTGGGATTCTCAGACTaGACTAACCCAGGAATACAG +
Preference number: 5 (lower is better)
Translates to: GVSLLKMPTVNSLAQVKCLGFSD*TNPGIQ
Trigger: CTGTATTCCTGGGTTAGTCAAGTCTGAGAATCCCAA...GCATTTAACCTGCGCCAGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650293.1
CDS-3UTR CAA 90 bp TGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCACTTCTGGTACCGTGTaGAGACACTTGGGATTCTCA +
Preference number: 5 (lower is better)
Translates to: CLVSGFSCTSVYISDIELTSGTV*RHLGFS
Trigger: TGAGAATCCCAAGTGTCTCAACACGGTACCAGAAGT...GAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS-3UTR CAA 90 bp CACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACAGGTTAAATGCAGTTTaGAAAACCCCCAGGACCTGG +
Preference number: 5 (lower is better)
Translates to: HGECLVSGFSCTSVYISDRLNAV*KTPRTW
Trigger: CCAGGTCCTGGGGGTTTTCAAAACTGCATTTAACCT...GTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTAAGCATTCACCGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650293.1
CDS-3UTR CAA 90 bp TGTGCAAGCAAGGTTAATCCTGAGACTAAATCTTGGCGTTCAGACTCCCGTAGAAGTGTCTGGATTTTCTaGTACCAGTGTTTACATATC +
Preference number: 5 (lower is better)
Translates to: CASKVNPETKSWRSDSRRSVWIF*YQCLHI
Trigger: GATATGTAAACACTGGTACAAGAAAATCCAGACACT...TCTACGGGAGTCTGAACGCCAAGATTTAGTCTCAGGATTAACCTTGCTTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS TCA 72 bp GCCCTCCTCTGCTGCTCAGTCAGGGTGGCCGTGTGGTaGCGCATCCAGCGCCGCGCCCCTGAGCAGCCACGC +
Preference number: 6 (lower is better)
Translates to: ALLCCSVRVAVW*RIQRRAPEQPR
Trigger: GCGTGGCTGCTCAGGGGCGCGGCGCTGGATGCGTCACCACACGGCCACCCTGACTGAGCAGCAGAGGAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000508384.5
ENST00000510434.1
ENST00000650293.1
CDS GCA 72 bp CAGCAGAACAGGTGGCCGCAGGGCGTGGCTGTTGGGTaGCTGCGCTCCTCCAGGCACAGGGTGCACAGGGGG +
Preference number: 6 (lower is better)
Translates to: QQNRWPQGVAVG*LRSSRHRVHRG
Trigger: CCCCCTGTGCACCCTGTGCCTGGAGGAGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACCTGTTCTGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS CCA 72 bp CCACATCTGTCTCCCGCCCACCGAGCACACTCTCCATaGCGGCAGGATGCCCGGGGCGAGCCCCTCGTAGGG +
Preference number: 6 (lower is better)
Translates to: PHLSPAHRAHSP*RQDARGEPLVG
Trigger: CCCTACGAGGGGCTCGCCCCGGGCATCCTGCCGCCATGGAGAGTGTGCTCGGTGGGCGGGAGACAGATGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515760.1
CDS CCA 72 bp CTGCACCACGCGGTGATGCACTCCCAGCAGAACAGGTaGCCGCAGGGCGTGGCTGTTGGGTGCCTGCGCTCC +
Preference number: 6 (lower is better)
Translates to: LHHAVMHSQQNR*PQGVAVGCLRS
Trigger: GGAGCGCAGGCACCCAACAGCCACGCCCTGCGGCCACCTGTTCTGCTGGGAGTGCATCACCGCGTGGTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS TCA 72 bp CAACATGTAGCCGCTGGAGGCAGGCGAGGCCCTGTCTaGGGACGAAGACCGCCCGCAGCAGCGCCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: QHVAAGGRRGPV*GRRPPAAAPSS
Trigger: AGAGGAGGGCGCTGCTGCGGGCGGTCTTCGTCCTCAGACAGGGCCTCGCCTGCCTCCAGCGGCTACATGTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000510434.1
ENST00000650293.1
CDS TCA 72 bp AGAGGGGACACTCCGCCTTGCTGCTGCACCACGCGGTaGTGCACTCCCAGCAGAACAGGTGGCCGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: RGDTPPCCCTTR*CTPSRTGGRRA
Trigger: CGCCCTGCGGCCACCTGTTCTGCTGGGAGTGCATCACCGCGTGGTGCAGCAGCAAGGCGGAGTGTCCCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000650293.1
CDS TCA 72 bp CCCGGGCGCCGGCTCAGCGGTAGTGCCGAAGGTAGATaGGCTTCTGGGGAGGGAACTTCTCCCGGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: PGRRLSGSAEGR*ASGEGTSPGRG
Trigger: CCCTCTGCCGGGAGAAGTTCCCTCCCCAGAAGCTCATCTACCTTCGGCACTACCGCTGAGCCGGCGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288774.8
ENST00000447513.7
ENST00000507596.5
ENST00000650293.1
CDS GCA 72 bp TCATCTATCAGAAGAGTAATAAGTCCCGCCAGGCTGTaGAGGGCGCCGCCCGCCGCGCTCCGCAGCCCACCG +
Preference number: 6 (lower is better)
Translates to: SSIRRVISPARL*RAPPAALRSPP
Trigger: CGGTGGGCTGCGGAGCGCGGCGGGCGGCGCCCTGCACAGCCTGGCGGGACTTATTACTCTTCTGATAGATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514502.1
CDS CCA 72 bp GGCGAGCCCCTCGTAGGGAACCAGGCTGGCACTCGGTaGTCCTTGCTACATGCTGAGCTGGGGTTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: GEPLVGNQAGTR*SLLHAELGLGA
Trigger: GGCTCCCAACCCCAGCTCAGCATGTAGCAAGGACCACCGAGTGCCAGCCTGGTTCCCTACGAGGGGCTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515760.1
CDS CCA 72 bp AGGCTGGCACTCGGTGGTCCTTGCTACATGCTGAGCTaGGGTTGGGAGCCTGAGAGCTTCTGTCAACAACTC +
Preference number: 6 (lower is better)
Translates to: RLALGGPCYMLS*GWEPESFCQQL
Trigger: GAGTTGTTGACAGAAGCTCTCAGGCTCCCAACCCCAGCTCAGCATGTAGCAAGGACCACCGAGTGCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515760.1
CDS CCA 72 bp GCACTCGGTGGTCCTTGCTACATGCTGAGCTGGGGTTaGGAGCCTGAGAGCTTCTGTCAACAACTCCCTCTA +
Preference number: 6 (lower is better)
Translates to: ALGGPCYMLSWG*EPESFCQQLPL
Trigger: TAGAGGGAGTTGTTGACAGAAGCTCTCAGGCTCCCAACCCCAGCTCAGCATGTAGCAAGGACCACCGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515760.1
CDS CCA 72 bp TCTCAGGGCCTTTCCCGGCTGCTTGCTCTGCCGGTCTaGAAAATGCTCTTCCCTAAGACGTGGTCTTTATCT +
Preference number: 6 (lower is better)
Translates to: SQGLSRLLALPV*KMLFPKTWSLS
Trigger: AGATAAAGACCACGTCTTAGGGAAGAGCATTTTCCAGACCGGCAGAGCAAGCAGCCGGGAAAGGCCCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515760.1
CDS CCA 72 bp GCTCTGCCGGTCTGGAAAATGCTCTTCCCTAAGACGTaGTCTTTATCTCTGAGAGCCCCTCACTTCCCAAGA +
Preference number: 6 (lower is better)
Translates to: ALPVWKMLFPKT*SLSLRAPHFPR
Trigger: TCTTGGGAAGTGAGGGGCTCTCAGAGATAAAGACCACGTCTTAGGGAAGAGCATTTTCCAGACCGGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515760.1
CDS CAA 90 bp CAGGCCAGAGGCCAACTGTCTAGCATCAAAAAGCAGCTCTCCAACTaGCTGGCTGTGAGGTCTTTCTGGAATCTCAATTTGCTCATCTAT +
Preference number: 6 (lower is better)
Translates to: QARGQLSSIKKQLSN*LAVRSFWNLNLLIY
Trigger: ATAGATGAGCAAATTGAGATTCCAGAAAGACCTCACAGCCAGCAAGTTGGAGAGCTGCTTTTTGATGCTAGACAGTTGGCCTCTGGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514502.1
CDS TCA 72 bp CTAGCATCAAAAAGCAGCTCTCCAACTTGCTGGCTGTaGGGTCTTTCTGGAATCTCAATTTGCTCATCTATC +
Preference number: 6 (lower is better)
Translates to: LASKSSSPTCWL*GLSGISICSSI
Trigger: GATAGATGAGCAAATTGAGATTCCAGAAAGACCTCACAGCCAGCAAGTTGGAGAGCTGCTTTTTGATGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514502.1