RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDZRN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000165966

Ensembl transcript IDs: ENST00000298919.7, ENST00000402685.7, ENST00000539469.6, ENST00000548316.1, ENST00000649474.1

Found 443 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAATGTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTaGGACAAAGACAATGGCCATTTATGTGTTAAATGTACAATGGGA +
Preference number: 1 (lower is better)
Translates to: QCHYISQEDCPPTLY*DKDNGHLCVKCTMG
Trigger: TCCCATTGTACATTTAACACATAAATGGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGACATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
3UTR-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCATAAAAACGCCACATTaGACGAGGCAATCATACTCT +
Preference number: 2 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAIKTPH*TRQSYS
Trigger: AGAGTATGATTGCCTCGTTCAATGTGGCGTTTTTAT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
3UTR-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCACAAGATGTGGCACATaGTTTATTACGAACAGGTTT +
Preference number: 2 (lower is better)
Translates to: TYHRKIVHLHFTETKTMATRCGT*FITNRF
Trigger: AAACCTGTTCGTAATAAATCATGTGCCACATCTTGT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
3UTR-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTATAAAAACGCCACATTaGACGAGGCAATCATACTCT +
Preference number: 2 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGIKTPH*TRQSYS
Trigger: AGAGTATGATTGCCTCGTTCAATGTGGCGTTTTTAT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
3UTR-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGACAAGATGTGGCACATaGTTTATTACGAACAGGTTT +
Preference number: 2 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWTRCGT*FITNRF
Trigger: AAACCTGTTCGTAATAAATCATGTGCCACATCTTGT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
3UTR-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATATAAAAACGCCACATaGAACGAGGCAATCATACTC +
Preference number: 3 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTYKNAT*NEAIIL
Trigger: GAGTATGATTGCCTCGTTCAATGTGGCGTTTTTATA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
3UTR-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTATAAAAACGCCACATaGAACGAGGCAATCATACTC +
Preference number: 3 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWYKNAT*NEAIIL
Trigger: GAGTATGATTGCCTCGTTCAATGTGGCGTTTTTATA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
3UTR-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTATAAAAACGCCACATaGAACGAGGCAATCATACTC +
Preference number: 3 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGYKNAT*NEAIIL
Trigger: GAGTATGATTGCCTCGTTCAATGTGGCGTTTTTATA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
3UTR TCA 72 bp ATAAAGAGTCACAAAATATATATAAAAACGCCACATTaGACGAGGCAATCATACTCTACCGAAACTGGTAGC +
Preference number: 3 (lower is better)
Translates to: IKSHKIYIKTPH*TRQSYSTETGS
Trigger: GCTACCAGTTTCGGTAGAGTATGATTGCCTCGTTCAATGTGGCGTTTTTATATATATTTTGTGACTCTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCTGCGCGCCGTGAGCTaGACCTCGCCCTGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMALRAVS*TSPCSA
Trigger: GGCGCTGCAGGGCGAGGTGCAGCTCACGGCGCGCAG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCAGCTCGTGCAGCCTaGCCGAGTGGCCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWPARAA*PSGRSR
Trigger: GCGGCTGCGGCCACTCGGTCAGGCTGCACGAGCTGG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGCCAAGGGCTGGCACTaGAGCGGGCACCGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTAKGWH*SGHRRL
Trigger: GAGGCGCCGGTGCCCGCTGCAGTGCCAGCCCTTGGC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGGGCCGAAGTCGCAGTaGTCGACGTGCGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAGPKSQ*STCASS
Trigger: GCTGGAGGCGCACGTCGAGCACTGCGACTTCGGCCC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGCTGCACCTCGCCCTaGAGCGCCCAGAGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTSCTSP*SAQSCA
Trigger: GGCGCAGCTCTGGGCGCTGCAGGGCGAGGTGCAGCT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATCTCCATCCCTGCGGTaGCCGCCACCGAGGTCGCCG +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTSPSLR*PPPRSP
Trigger: CGGCGACCTCGGTGGCGGCCACCGCAGGGATGGAGA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTGGTACCTGCGCGCCGTaGGCTGCACCTCGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGGTCAP*AAPRPA
Trigger: TGCAGGGCGAGGTGCAGCTCACGGCGCGCAGGTACC...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATGCAGCGCCCAGAGCTaGGCCAGCAGCGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTCSAQS*ASSAFS
Trigger: CGAGAAGGCGCTGCTGGCGCAGCTCTGGGCGCTGCA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTCACGGCGACGGCGCTaGTCTTTGGCCCTAACCAGG +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMASRRRR*SLALTR
Trigger: CCTGGTTAGGGCCAAAGAGCAGCGCCGTCGCCGTGA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGCGCCTCCAGCTCGTaGAGCCTGACCGAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQCASSS*SLTEWP
Trigger: CGGCCACTCGGTCAGGCTGCACGAGCTGGAGGCGCA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGCACGGGTCTCTTTGTaGTGTACCGTGTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAARVSL*CTVSRR
Trigger: GCGACGGGACACGGTACATCACAAAGAGACCCGTGC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCACCTGCTTCGCATCATaGACTCACGGCGACGGCGCT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMATCFAS*THGDGA
Trigger: AGCGCCGTCGCCGTGAGTTCATGATGCGAAGCAGGT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCTCACTGCCGCTCTaGGGGCTCTCCTTGAGACAC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWPSLPL*GLSLRH
Trigger: GTGTCTCAAGGAGAGCCCTCAGAGCGGCAGTGAGGG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATCACGGCGACGGCGCTaGTCTTTGGCCCTAACCAGG +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTSRRRR*SLALTR
Trigger: CCTGGTTAGGGCCAAAGAGCAGCGCCGTCGCCGTGA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCGGGTCCACGGCTTCTaGGAAGCGCTCCAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWRVHGF*EALQGK
Trigger: TTTGCCCTGGAGCGCTTCGCAGAAGCCGTGGACCCG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACCTGGCCGCACAGTTTaGACTCCAGAGCCGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTPGRTV*TPEPGP
Trigger: TGGACCCGGCTCTGGAGTGCAAACTGTGCGGCCAGG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR GCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCGTGCCCGCACGGCGTaGACAGGGGCTCTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGRARTA*TGALQA
Trigger: TGCTTGAAGAGCCCCTGTGCACGCCGTGCGGGCACG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCACTGGAGGGGTAGGTaGACGAAGCTTGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAHWRGR*TKLGQS
Trigger: GCTCTGGCCAAGCTTCGTCCACCTACCCCTCCAGTG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGCACGGGTCTCTTTGTaGTGTACCGTGTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTARVSL*CTVSRR
Trigger: GCGACGGGACACGGTACATCACAAAGAGACCCGTGC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGCACGGGTCTCTTTGTaGTGTACCGTGTCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWARVSL*CTVSRR
Trigger: GCGACGGGACACGGTACATCACAAAGAGACCCGTGC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACCTGCTTCGCATCATaGACTCACGGCGACGGCGCT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTTCFAS*THGDGA
Trigger: AGCGCCGTCGCCGTGAGTTCATGATGCGAAGCAGGT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACCCTCACTGCCGCTCTaGGGGCTCTCCTTGAGACAC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQPSLPL*GLSLRH
Trigger: GTGTCTCAAGGAGAGCCCTCAGAGCGGCAGTGAGGG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTTCTTGCCCTCACTaGCGCTCTGAGGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWPSCPH*RSEGSP
Trigger: AGGAGAGCCCTCAGAGCGGCAGTGAGGGCAAGAAGG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATATGCTCTCCATCCCTaGGGTGGCCGCCACCGAGGT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQYALHP*GGRHRG
Trigger: ACCTCGGTGGCGGCCACCGCAGGGATGGAGAGCATA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACACTGGAGGGGTAGGTaGACGAAGCTTGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTHWRGR*TKLGQS
Trigger: GCTCTGGCCAAGCTTCGTCCACCTACCCCTCCAGTG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGACTCTCGTGCCATCTaGAGACTTGGCCCCATGGGT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMADSRAI*RLGPMG
Trigger: ACCCATGGGGCCAAGTCTCCAGATGGCACGAGAGTC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGACTCGCAGCTTCTaGATGAGGCTGCGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQWTRSF*MRLRSG
Trigger: GCCGCTGCGCAGCCTCATCCAGAAGCTGCGAGTCCA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGGGAACGGTCTACAGTaGGCGGAGTACTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTGNGLQ*AEYFCS
Trigger: GCTGCAGAAGTACTCCGCTCACTGTAGACCGTTCCC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGGGAACGGTCTACAGTaGGCGGAGTACTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWGNGLQ*AEYFCS
Trigger: GCTGCAGAAGTACTCCGCTCACTGTAGACCGTTCCC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTACCTGCTTCGCATCATaGACTCACGGCGACGGCGCT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGTCFAS*THGDGA
Trigger: AGCGCCGTCGCCGTGAGTTCATGATGCGAAGCAGGT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCAGAGTGTCTTGGCTCTaGCCCAGGTCTCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMARVSWL*PRSLLL
Trigger: GAGCAAGAGAGACCTGGGGCAGAGCCAAGACACTCT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCACAGATGTCTGGCACTaGAGGGGTAGGTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMATDVWH*RGRWTK
Trigger: CTTCGTCCACCTACCCCTCCAGTGCCAGACATCTGT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGAATGGACAGATGTCTaGCACTGGAGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAEWTDV*HWRGRW
Trigger: CCACCTACCCCTCCAGTGCCAGACATCTGTCCATTC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGCTGCTCCACCTCATTaGCAGTGGGCTGCATTGCTT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAAAPPH*QWAALL
Trigger: AAGCAATGCAGCCCACTGCCAATGAGGTGGAGCAGC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGACTCTCGTGCCATCTaGAGACTTGGCCCCATGGGT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWDSRAI*RLGPMG
Trigger: ACCCATGGGGCCAAGTCTCCAGATGGCACGAGAGTC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGTGAACTTCTCCTaGTACCTGCGCGCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQWVNFS*YLRAVS
Trigger: GCTCACGGCGCGCAGGTACCAGGAGAAGTTCACCCA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCAGGCCCAGCTTCTCTTaGCTGCTAACACGACACAAC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMARPSFS*LLTRHN
Trigger: GTTGTGTCGTGTTAGCAGTCAAGAGAAGCTGGGCCT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGGGAACGGTCTACAGTaGGCGGAGTACTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQGNGLQ*AEYFCS
Trigger: GCTGCAGAAGTACTCCGCTCACTGTAGACCGTTCCC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGGCTCTGAACACTTCTaGGACTCCTTGCACATGCTC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAGSEHF*DSLHML
Trigger: GAGCATGTGCAAGGAGTCTCAGAAGTGTTCAGAGCC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTCTGAGGGCTCTCCTTaGGACACTCTAACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMASEGSP*DTLTCF
Trigger: GAAGCAGGTTAGAGTGTCTCAAGGAGAGCCCTCAGA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTGGGCTCCTTGGCATTaGGAAAAGCTTCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAWAPWH*EKLPLP
Trigger: AGGCAGTGGAAGCTTTTCGCAATGCCAAGGAGCCCA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGAGTGTCTTGGCTCTaGCCCAGGTCTCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTRVSWL*PRSLLL
Trigger: GAGCAAGAGAGACCTGGGGCAGAGCCAAGACACTCT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGCCCTAACCAGGTGCTaGTTTCTCTCCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAALTRC*FLSSLL
Trigger: GAGCAAAGAGGAGAGAAAGCAGCACCTGGTTAGGGC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCATTATGGACTCTCGTaGCATCTGGAGACTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAHYGLS*HLETWP
Trigger: GGGCCAAGTCTCCAGATGGCACGAGAGTCCATAATG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGAATGGACAGATGTCTaGCACTGGAGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWEWTDV*HWRGRW
Trigger: CCACCTACCCCTCCAGTGCCAGACATCTGTCCATTC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGCTGCTCCACCTCATTaGCAGTGGGCTGCATTGCTT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWAAPPH*QWAALL
Trigger: AAGCAATGCAGCCCACTGCCAATGAGGTGGAGCAGC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGAGGTTGATCACCCTTaGAAGGGAACTGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAEVDHP*KGTVRG
Trigger: TCCCCTGACAGTTCCCTTCCAAGGGTGATCAACCTC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATGTCCGGAAGAGGACTaGGTGGCTGCCATTGTGCTT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTCPEED*VAAIVL
Trigger: AAGCACAATGGCAGCCACCCAGTCCTCTTCCGGACA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTGGTGTCATCGTCTGTaGTCATGCCACTCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAWCHRL*SCHSAL
Trigger: AAGAGCGGAGTGGCATGACCACAGACGATGACACCA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTGACTCTCGTGCCATCTaGAGACTTGGCCCCATGGGT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGDSRAI*RLGPMG
Trigger: ACCCATGGGGCCAAGTCTCCAGATGGCACGAGAGTC...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTGGCTCTTCAAGCACCTaGCCGCACAGTTTGCACTCC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGGSSST*PHSLHS
Trigger: GGAGTGCAAACTGTGCGGCCAGGTGCTTGAAGAGCC...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGAAAGGCAAGTGAACTaGAAGGGAATCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAERQVN*KGITLQ
Trigger: CTGGAGGGTGATTCCCTTTCAGTTCACTTGCCTTTC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTCCACTGCCTCTTCATaGGTGGCCTTTGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMASTASS*VAFERS
Trigger: GGATCTTTCAAAGGCCACTCATGAAGAGGCAGTGGA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCATAAGCTGCACTTCTaGAGCCATCCCATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWHKLHF*SHPIGW
Trigger: CCAGCCTATGGGATGGCTTCAGAAGTGCAGCTTATG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCAGAATGGCAGCTGTCTaGGAGCAGGAATGGACAGAT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMARMAAV*EQEWTD
Trigger: ATCTGTCCATTCCTGCTCTCAGACAGCTGCCATTCT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGGCCCAGCTTCTCTTaGCTGCTAACACGACACAAC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTRPSFS*LLTRHN
Trigger: GTTGTGTCGTGTTAGCAGTCAAGAGAAGCTGGGCCT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACAGCCTTCATCCAGCTaGATCTCTGGCCTTGCAACA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTQPSSS*ISGLAT
Trigger: TGTTGCAAGGCCAGAGATTCAGCTGGATGAAGGCTG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCAGCCTTCATCCAGCTaGATCTCTGGCCTTGCAACA +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWQPSSS*ISGLAT
Trigger: TGTTGCAAGGCCAGAGATTCAGCTGGATGAAGGCTG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCACTCCGCTCTTCCTTaGTCTTTAAGGCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAHSALP*SLRHVP
Trigger: AGGAACGTGCCTTAAAGATCAAGGAAGAGCGGAGTG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTCTGAGGGCTCTCCTTaGGACACTCTAACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWSEGSP*DTLTCF
Trigger: GAAGCAGGTTAGAGTGTCTCAAGGAGAGCCCTCAGA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACGAAGTTGCGGACGTaGGCCATGTATTGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTTKLRT*AMYWVN
Trigger: GTTCACCCAATACATGGCTCACGTCCGCAACTTCGT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTGGGCTCCTTGGCATTaGGAAAAGCTTCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWWAPWH*EKLPLP
Trigger: AGGCAGTGGAAGCTTTTCGCAATGCCAAGGAGCCCA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGTCTTCTGTTCTGTCTaGATCAGCAGGCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAVFCSV*ISRQAG
Trigger: TCCAGCTTGCCTGCTGATGCAGACAGAACAGAAGAC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTGCTCTTCAAAGATGTaGTATTGGGGTCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMACSSKM*YWGPRL
Trigger: CAGCCGAGGACCCCAATAGCACATCTTTGAAGAGCA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAAGAGTGTCTTGGCTCTaGCCCAGGTCTCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQRVSWL*PRSLLL
Trigger: GAGCAAGAGAGACCTGGGGCAGAGCCAAGACACTCT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGCAACTGTAGCTCATaGTCCACTCCCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTSNCSS*STPSCS
Trigger: GGAGCAAGAGGGAGTGGAGCATGAGCTACAGTTGCT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCAGGTCGACTCTTTACTaGTCTGTCCGGAAGAGGACT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMARSTLY*SVRKRT
Trigger: AGTCCTCTTCCGGACAGAGCAGTAAAGAGTCGACCT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGCCCTAACCAGGTGCTaGTTTCTCTCCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTALTRC*FLSSLL
Trigger: GAGCAAAGAGGAGAGAAAGCAGCACCTGGTTAGGGC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTTGGCCCTAACCAGGTaGTGCTTTCTCTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMALALTR*CFLSSL
Trigger: CAAAGAGGAGAGAAAGCAGCACCTGGTTAGGGCCAA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACATTATGGACTCTCGTaGCATCTGGAGACTTGGCCC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTHYGLS*HLETWP
Trigger: GGGCCAAGTCTCCAGATGGCACGAGAGTCCATAATG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGGTCGCCGACGAAGTTaGGGACGTGAGCCATGTATT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQGRRRS*GREPCI
Trigger: AATACATGGCTCACGTCCGCAACTTCGTCGGCGACC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACAAACCGCTGTTAGCTaGAAGCGTAAGCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTQTAVS*KRKPEW
Trigger: CCACTCTGGCTTACGCTTCCAGCTAACAGCGGTTTG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCCACAATGGGCTCCTTaGCATTGCGAAAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAPQWAP*HCEKLP
Trigger: TGGAAGCTTTTCGCAATGCCAAGGAGCCCATTGTGG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCAGCCATCCCATAGGCTaGTCTACTAAGAGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMASHPIG*STKRCS
Trigger: CGAACACCTCTTAGTAGACCAGCCTATGGGATGGCT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTACAGATGTCTGGCACTaGAGGGGTAGGTGGACGAAG +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGTDVWH*RGRWTK
Trigger: CTTCGTCCACCTACCCCTCCAGTGCCAGACATCTGT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGAATGGACAGATGTCTaGCACTGGAGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQEWTDV*HWRGRW
Trigger: CCACCTACCCCTCCAGTGCCAGACATCTGTCCATTC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCATCCAGCTGAATCTCTaGCCTTGCAACAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAIQLNL*PCNKQH
Trigger: GTGCTGCTTGTTGCAAGGCCAGAGATTCAGCTGGAT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGCTGCTCCACCTCATTaGCAGTGGGCTGCATTGCTT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQAAPPH*QWAALL
Trigger: AAGCAATGCAGCCCACTGCCAATGAGGTGGAGCAGC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGAGGTTGATCACCCTTaGAAGGGAACTGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTEVDHP*KGTVRG
Trigger: TCCCCTGACAGTTCCCTTCCAAGGGTGATCAACCTC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTGTCCGGAAGAGGACTaGGTGGCTGCCATTGTGCTT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGCPEED*VAAIVL
Trigger: AAGCACAATGGCAGCCACCCAGTCCTCTTCCGGACA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGTCCGGAAGAGGACTaGGTGGCTGCCATTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQCPEED*VAAIVL
Trigger: AAGCACAATGGCAGCCACCCAGTCCTCTTCCGGACA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGGAGACTTGGCCCCATaGGTCATCAGTTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAGDLAP*VISSWI
Trigger: AATCCAAGAACTGATGACCCATGGGGCCAAGTCTCC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATGCCATCTGGAGACTTaGCCCCATGGGTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTCHLET*PHGSSV
Trigger: AACTGATGACCCATGGGGCCAAGTCTCCAGATGGCA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTCCACTGCCTCTTCATaGGTGGCCTTTGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWSTASS*VAFERS
Trigger: GGATCTTTCAAAGGCCACTCATGAAGAGGCAGTGGA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACATAAGCTGCACTTCTaGAGCCATCCCATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQHKLHF*SHPIGW
Trigger: CCAGCCTATGGGATGGCTTCAGAAGTGCAGCTTATG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGAAGGTGATGTCCGTCTaGGTGCTGGCATTCATAAGC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWKVMSV*VLAFIS
Trigger: GCTTATGAATGCCAGCACTCAGACGGACATCACCTT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGAGAATGGCAGCTGTCTaGGAGCAGGAATGGACAGAT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWRMAAV*EQEWTD
Trigger: ATCTGTCCATTCCTGCTCTCAGACAGCTGCCATTCT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAAGGCCCAGCTTCTCTTaGCTGCTAACACGACACAAC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQRPSFS*LLTRHN
Trigger: GTTGTGTCGTGTTAGCAGTCAAGAGAAGCTGGGCCT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACAGCCTTCATCCAGCTaGATCTCTGGCCTTGCAACA +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQQPSSS*ISGLAT
Trigger: TGTTGCAAGGCCAGAGATTCAGCTGGATGAAGGCTG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCTCATGGTTGTTGGATaGGGATGTTGCAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMALMVVG*GCCSVC
Trigger: ACAGACACTGCAACATCCTCATCCAACAACCATGAG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTGCATTCTCCTGCTCTaGGCTCTCATCATTTCGCAA +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMACILLL*ALIISQ
Trigger: TTGCGAAATGATGAGAGCTCAGAGCAGGAGAATGCA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCTCTTGCTCCCCTTaGTTGCATTCAATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWPSCSP*LHSIVL
Trigger: CAGCACAATTGAATGCAATCAAGGGGAGCAAGAGGG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTTTCTGGATGCTCCATaGTGTCATCTAGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAFLDAP*CHLAFP
Trigger: GGGGAAAGCTAGATGACATCATGGAGCATCCAGAAA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGAAGGGATGTGTTCGCTaGCTGCCTTCTCTTGATCAG +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWKGCVR*LPSLDQ
Trigger: CTGATCAAGAGAAGGCAGTCAGCGAACACATCCCTT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACATGCTCACCAAGCTaGGCTGACTCTGAGCATACT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTTCSPS*ADSEHT
Trigger: AGTATGCTCAGAGTCAGCTCAGCTTGGTGAGCATGT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGGCTCTGAACACTTCTaGGACTCCTTGCACATGCTC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQGSEHF*DSLHML
Trigger: GAGCATGTGCAAGGAGTCTCAGAAGTGTTCAGAGCC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTGGCTCTGAACACTTCTaGGACTCCTTGCACATGCTC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGGSEHF*DSLHML
Trigger: GAGCATGTGCAAGGAGTCTCAGAAGTGTTCAGAGCC...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTTCCATCTTGGGCTCTaGACACTTCTGAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAFHLGL*TLLRLL
Trigger: AAGGAGTCTCAGAAGTGTTCAGAGCCCAAGATGGAA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCACTCCGCTCTTCCTTaGTCTTTAAGGCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWHSALP*SLRHVP
Trigger: AGGAACGTGCCTTAAAGATCAAGGAAGAGCGGAGTG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATCTGAGGGCTCTCCTTaGGACACTCTAACCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQSEGSP*DTLTCF
Trigger: GAAGCAGGTTAGAGTGTCTCAAGGAGAGCCCTCAGA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGAGCCATGTATTGGGTaGACTTCTCCTGGTACCTGC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQEPCIG*TSPGTC
Trigger: GCAGGTACCAGGAGAAGTTCACCCAATACATGGCTC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTGGTGTGTAGCAGCATaGTCTTCTTCGCTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAWCVAA*SSSLSL
Trigger: TAGGGAAAGCGAAGAAGAGCATGCTGCTACACACCA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGCTCCTTGGCATTaGGAAAAGCTTCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQWAPWH*EKLPLP
Trigger: AGGCAGTGGAAGCTTTTCGCAATGCCAAGGAGCCCA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCTGGCATTCATAAGCTaGACTTCTGAAGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMALAFIS*TSEAIP
Trigger: TGGGATGGCTTCAGAAGTGCAGCTTATGAATGCCAG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGTCTTCTGTTCTGTCTaGATCAGCAGGCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTVFCSV*ISRQAG
Trigger: TCCAGCTTGCCTGCTGATGCAGACAGAACAGAAGAC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGTCTTCTGTTCTGTCTaGATCAGCAGGCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWVFCSV*ISRQAG
Trigger: TCCAGCTTGCCTGCTGATGCAGACAGAACAGAAGAC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACGTCTTTGGCAGCAATaGTATTTGGGTCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTRLWQQ*YLGQPR
Trigger: GCGAGGTTGACCCAAATAGCATTGCTGCCAAAGACG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCGTCTTTGGCAGCAATaGTATTTGGGTCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWRLWQQ*YLGQPR
Trigger: GCGAGGTTGACCCAAATAGCATTGCTGCCAAAGACG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGGCAGTGGGCTGCATTaGTTCATTATGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAGSGLH*FIMLFF
Trigger: GAAGAAGAGCATAATGAAGCAATGCAGCCCACTGCC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTCGGCTGCATTCTCCTaGTCTGAGCTCTCATCATTT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMASAAFS*SELSSF
Trigger: AAATGATGAGAGCTCAGAGCAGGAGAATGCAGCCGA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATGCTCTTCAAAGATGTaGTATTGGGGTCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTCSSKM*YWGPRL
Trigger: CAGCCGAGGACCCCAATAGCACATCTTTGAAGAGCA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTGCTCTTCAAAGATGTaGTATTGGGGTCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWCSSKM*YWGPRL
Trigger: CAGCCGAGGACCCCAATAGCACATCTTTGAAGAGCA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGCCCCAGGTCTCTCTTaGTCTTCAAAGATGTGCTAT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAAPGLS*SSKMCY
Trigger: ATAGCACATCTTTGAAGAGCAAGAGAGACCTGGGGC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAAGCAACTGTAGCTCATaGTCCACTCCCTCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQSNCSS*STPSCS
Trigger: GGAGCAAGAGGGAGTGGAGCATGAGCTACAGTTGCT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCGGAATCCTCCATCATaGAATGTCCAGATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMARNPPS*NVQMSP
Trigger: TGGAGACATCTGGACATTGCATGATGGAGGATTCCG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGAGGTCGACTCTTTACTaGTCTGTCCGGAAGAGGACT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWRSTLY*SVRKRT
Trigger: AGTCCTCTTCCGGACAGAGCAGTAAAGAGTCGACCT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGGTCGACTCTTTACTaGTCTGTCCGGAAGAGGACT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTRSTLY*SVRKRT
Trigger: AGTCCTCTTCCGGACAGAGCAGTAAAGAGTCGACCT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGCCCTAACCAGGTGCTaGTTTCTCTCCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQALTRC*FLSSLL
Trigger: GAGCAAAGAGGAGAGAAAGCAGCACCTGGTTAGGGC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATTGGCCCTAACCAGGTaGTGCTTTCTCTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTLALTR*CFLSSL
Trigger: CAAAGAGGAGAGAAAGCAGCACCTGGTTAGGGCCAA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACATTATGGACTCTCGTaGCATCTGGAGACTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQHYGLS*HLETWP
Trigger: GGGCCAAGTCTCCAGATGGCACGAGAGTCCATAATG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATAGTGAATGGCTTATaGTCTCCATCCCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTIVNGL*SPSLRW
Trigger: CCACCGCAGGGATGGAGAGCATAAGCCATTCACTAT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCCCATTGACAGTGGATaGCCAACATGTCAACAATGC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAPIDSG*PTCQQC
Trigger: GCATTGTTGACATGTTGGCCATCCACTGTCAATGGG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298919.7
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACCACAATGGGCTCCTTaGCATTGCGAAAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTPQWAP*HCEKLP
Trigger: TGGAAGCTTTTCGCAATGCCAAGGAGCCCATTGTGG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGAGCCATCCCATAGGCTaGTCTACTAAGAGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWSHPIG*STKRCS
Trigger: CGAACACCTCTTAGTAGACCAGCCTATGGGATGGCT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTCAAAGATGTGCTATTaGGGTCCTCGGCTGCATTCT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMASKMCY*GPRLHS
Trigger: AGAATGCAGCCGAGGACCCCAATAGCACATCTTTGA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCAGATGTCTCCATACTaGTCTGTCACTTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAQMSPY*SVTFWS
Trigger: GCTCCAGAAAGTGACAGACCAGTATGGAGACATCTG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTGGTTTTGGCTTTGGTaGAGGTCGACTCTTTACTGC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAWFWLW*RSTLYC
Trigger: GCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACTTGCTCAGTGGTTTTaGCTTTGGTGGAGGTCGACT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTLAQWF*LWWRST
Trigger: AGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCTTGCTCAGTGGTTTTaGCTTTGGTGGAGGTCGACT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWLAQWF*LWWRST
Trigger: AGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTGGTGTCATCGTCTGTaGTCATGCCACTCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGWCHRL*SCHSAL
Trigger: AAGAGCGGAGTGGCATGACCACAGACGATGACACCA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGGAGACTTGGCCCCATaGGTCATCAGTTCTTGGATT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTGDLAP*VISSWI
Trigger: AATCCAAGAACTGATGACCCATGGGGCCAAGTCTCC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGCCATCTGGAGACTTaGCCCCATGGGTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQCHLET*PHGSSV
Trigger: AACTGATGACCCATGGGGCCAAGTCTCCAGATGGCA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCATTCGGTCATACAGTaGTCACCGACAAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAHSVIQ*SPTRRH
Trigger: ATGCCTTCTTGTCGGTGACCACTGTATGACCGAATG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGAAAGGCAAGTGAACTaGAAGGGAATCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQERQVN*KGITLQ
Trigger: CTGGAGGGTGATTCCCTTTCAGTTCACTTGCCTTTC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGAACTGAAAGGCAAGTaGACTGAAAGGGAATCACCC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTELKGK*TERESP
Trigger: GGGTGATTCCCTTTCAGTTCACTTGCCTTTCAGTTC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATCCACTGCCTCTTCATaGGTGGCCTTTGAAAGATCC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQSTASS*VAFERS
Trigger: GGATCTTTCAAAGGCCACTCATGAAGAGGCAGTGGA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTAAGGTGATGTCCGTCTaGGTGCTGGCATTCATAAGC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGKVMSV*VLAFIS
Trigger: GCTTATGAATGCCAGCACTCAGACGGACATCACCTT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAAAGGTGATGTCCGTCTaGGTGCTGGCATTCATAAGC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQKVMSV*VLAFIS
Trigger: GCTTATGAATGCCAGCACTCAGACGGACATCACCTT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTAGAATGGCAGCTGTCTaGGAGCAGGAATGGACAGAT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGRMAAV*EQEWTD
Trigger: ATCTGTCCATTCCTGCTCTCAGACAGCTGCCATTCT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATTGGGTCAACCTCGCTaGCATAAATGCCGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQLGQPR*HKCRCL
Trigger: AAGACACCGGCATTTATGTCAGCGAGGTTGACCCAA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCTCATGGTTGTTGGATaGGGATGTTGCAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWLMVVG*GCCSVC
Trigger: ACAGACACTGCAACATCCTCATCCAACAACCATGAG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACTCATGGTTGTTGGATaGGGATGTTGCAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTLMVVG*GCCSVC
Trigger: ACAGACACTGCAACATCCTCATCCAACAACCATGAG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCAGGCTCTCATTGTACTaGAGTTCAACACTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMARLSLY*SSTLPR
Trigger: TCTGGGAAGTGTTGAACTTCAGTACAATGAGAGCCT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGTTGCCAATGCAGTCTaGGTCAATGTATTCACCAGA +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAVANAV*VNVFTR
Trigger: TCTGGTGAATACATTGACTCAGACTGCATTGGCAAC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCCCTCTTGCTCCCCTTaGTTGCATTCAATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGPSCSP*LHSIVL
Trigger: CAGCACAATTGAATGCAATCAAGGGGAGCAAGAGGG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATTTCTGGATGCTCCATaGTGTCATCTAGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTFLDAP*CHLAFP
Trigger: GGGGAAAGCTAGATGACATCATGGAGCATCCAGAAA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAAAGGGATGTGTTCGCTaGCTGCCTTCTCTTGATCAG +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQKGCVR*LPSLDQ
Trigger: CTGATCAAGAGAAGGCAGTCAGCGAACACATCCCTT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAACATGCTCACCAAGCTaGGCTGACTCTGAGCATACT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQTCSPS*ADSEHT
Trigger: AGTATGCTCAGAGTCAGCTCAGCTTGGTGAGCATGT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTACATGCTCACCAAGCTaGGCTGACTCTGAGCATACT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGTCSPS*ADSEHT
Trigger: AGTATGCTCAGAGTCAGCTCAGCTTGGTGAGCATGT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCACTCCGCTCTTCCTTaGTCTTTAAGGCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGHSALP*SLRHVP
Trigger: AGGAACGTGCCTTAAAGATCAAGGAAGAGCGGAGTG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATGGTGTGTAGCAGCATaGTCTTCTTCGCTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTWCVAA*SSSLSL
Trigger: TAGGGAAAGCGAAGAAGAGCATGCTGCTACACACCA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCTGGCATTCATAAGCTaGACTTCTGAAGCCATCCCA +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWLAFIS*TSEAIP
Trigger: TGGGATGGCTTCAGAAGTGCAGCTTATGAATGCCAG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACGTCTTTGGCAGCAATaGTATTTGGGTCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQRLWQQ*YLGQPR
Trigger: GCGAGGTTGACCCAAATAGCATTGCTGCCAAAGACG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCTGAATCTCTGGCCTTaGAACAAGCAGCACGATTCT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWLNLWP*NKQHDS
Trigger: AGAATCGTGCTGCTTGTTGCAAGGCCAGAGATTCAG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTCATTGGCAGTGGGCTaGATTGCTTCATTATGCTCT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMASLAVG*IASLCS
Trigger: AGAGCATAATGAAGCAATGCAGCCCACTGCCAATGA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGCCCCAGGTCTCTCTTaGTCTTCAAAGATGTGCTAT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTAPGLS*SSKMCY
Trigger: ATAGCACATCTTTGAAGAGCAAGAGAGACCTGGGGC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGAGTCCTCATCTGGGTTaGCAATGCAGTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWSPHLG*QCSLSQ
Trigger: TTGACTCAGACTGCATTGGCAACCCAGATGAGGACT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGTCCTCATCTGGGTTaGCAATGCAGTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTSPHLG*QCSLSQ
Trigger: TTGACTCAGACTGCATTGGCAACCCAGATGAGGACT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCTTGCTCCCCTTGATTaGATTCAATTGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMALAPLD*IQLCCL
Trigger: CAAGCAGCACAATTGAATGCAATCAAGGGGAGCAAG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACGGAATCCTCCATCATaGAATGTCCAGATGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTRNPPS*NVQMSP
Trigger: TGGAGACATCTGGACATTGCATGATGGAGGATTCCG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATCAGCGCTACAACCTTaGTCAGTGGTTTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTSALQP*SVVLAL
Trigger: CAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTCAGCGCTACAACCTTaGTCAGTGGTTTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWSALQP*SVVLAL
Trigger: CAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGATCAGGAAGCTTGCTaGCTTCTAAAACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMADQEAC*LLKPSP
Trigger: AGGAGAAGGTTTTAGAAGGCAGCAAGCTTCCTGATC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGATGTGTTCGCTGACTaGCTTCTCTTGATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTDVFAD*LLLIRK
Trigger: CTTCCTGATCAAGAGAAGGCAGTCAGCGAACACATC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTTGGCCCTAACCAGGTaGTGCTTTCTCTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGLALTR*CFLSSL
Trigger: CAAAGAGGAGAGAAAGCAGCACCTGGTTAGGGCCAA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTAATCTCCAGGCCATCTaGTCTGTCAGCAGGTCCATT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGNLQAI*SVSRSI
Trigger: AATGGACCTGCTGACAGAGCAGATGGCCTGGAGATT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAAAGCGTAAGCCAGAGTaGTGTGTAGCAGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQKRKPE*CVAACS
Trigger: AGAGCATGCTGCTACACACCACTCTGGCTTACGCTT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTCAAGTCACAGCTCCTaGGAAACTTCATACAGCAGT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMASSHSS*ETSYSS
Trigger: ACTGCTGTATGAAGTTTCCCAGGAGCTGTGACTTGA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACCACAATGGGCTCCTTaGCATTGCGAAAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQPQWAP*HCEKLP
Trigger: TGGAAGCTTTTCGCAATGCCAAGGAGCCCATTGTGG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATTGGATGTAGAGAATaGCAGCTGTCTGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTIGCRE*QLSESR
Trigger: CCTGCTCTCAGACAGCTGCCATTCTCTACATCCAAT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGGCAGCAATGCTATTTaGGTCAACCTCGCTGACATA +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWGSNAI*VNLADI
Trigger: TATGTCAGCGAGGTTGACCCAAATAGCATTGCTGCC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTATCCAGCTGAATCTCTaGCCTTGCAACAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGIQLNL*PCNKQH
Trigger: GTGCTGCTTGTTGCAAGGCCAGAGATTCAGCTGGAT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAATCCAGCTGAATCTCTaGCCTTGCAACAAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQIQLNL*PCNKQH
Trigger: GTGCTGCTTGTTGCAAGGCCAGAGATTCAGCTGGAT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCACCTCATTGGCAGTaGGCTGCATTGCTTCATTAT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWPPHWQ*AALLHY
Trigger: ATAATGAAGCAATGCAGCCCACTGCCAATGAGGTGG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATCAAAGATGTGCTATTaGGGTCCTCGGCTGCATTCT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTSKMCY*GPRLHS
Trigger: AGAATGCAGCCGAGGACCCCAATAGCACATCTTTGA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTGGTTTTGGCTTTGGTaGAGGTCGACTCTTTACTGC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWWFWLW*RSTLYC
Trigger: GCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCAGTGGTTTTGGCTTTaGTGGAGGTCGACTCTTTAC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWQWFWL*WRSTLY
Trigger: GTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACAGTGGTTTTGGCTTTaGTGGAGGTCGACTCTTTAC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTQWFWL*WRSTLY
Trigger: GTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCTTGCTCAGTGGTTTTaGCTTTGGTGGAGGTCGACT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGLAQWF*LWWRST
Trigger: AGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATACAACCTTGCTCAGTaGTTTTGGCTTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTYNLAQ*FWLWWR
Trigger: CCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGCCGGGCGTGTGCTaGGATGTTTGCATATCTATA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTMPGVC*DVCISI
Trigger: TATAGATATGCAAACATCCCAGCACACGCCCGGCAT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGACAAGAAGGCATTATaGACTCTCGTGCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWDKKAL*TLVPSG
Trigger: TCCAGATGGCACGAGAGTCCATAATGCCTTCTTGTC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGACAAGAAGGCATTATaGACTCTCGTGCCATCTGGA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTDKKAL*TLVPSG
Trigger: TCCAGATGGCACGAGAGTCCATAATGCCTTCTTGTC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACATTCGGTCATACAGTaGTCACCGACAAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTHSVIQ*SPTRRH
Trigger: ATGCCTTCTTGTCGGTGACCACTGTATGACCGAATG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAAAAGATCCTTCCCATTaGCAGTGGATGGCCAACATG +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQKDPSH*QWMANM
Trigger: CATGTTGGCCATCCACTGTCAATGGGAAGGATCTTT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298919.7
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATTCATGAGTGGCCTTTaGAAGATCCTTCCCATTGAC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTFMSGL*KILPID
Trigger: GTCAATGGGAAGGATCTTTCAAAGGCCACTCATGAA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGCATTCTCCTGCTCTaGGCTCTCATCATTTCGCAA +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQCILLL*ALIISQ
Trigger: TTGCGAAATGATGAGAGCTCAGAGCAGGAGAATGCA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGTTGCCAATGCAGTCTaGGTCAATGTATTCACCAGA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTVANAV*VNVFTR
Trigger: TCTGGTGAATACATTGACTCAGACTGCATTGGCAAC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGCCTGCATGATATTCTaGCACTCAAGCTCAATGTTT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAACMIF*HSSSMF
Trigger: AAACATTGAGCTTGAGTGTCAGAATATCATGCAGGC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTTCCATCTTGGGCTCTaGACACTTCTGAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGFHLGL*TLLRLL
Trigger: AAGGAGTCTCAGAAGTGTTCAGAGCCCAAGATGGAA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATTCCATCTTGGGCTCTaGACACTTCTGAGACTCCTT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQFHLGL*TLLRLL
Trigger: AAGGAGTCTCAGAAGTGTTCAGAGCCCAAGATGGAA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACCACCTACACTTTACTaGGACAAAGACAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTPPTLY*DKDNGH
Trigger: ATGGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCTGAATCTCTGGCCTTaGAACAAGCAGCACGATTCT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGLNLWP*NKQHDS
Trigger: AGAATCGTGCTGCTTGTTGCAAGGCCAGAGATTCAG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGGCAGTGGGCTGCATTaGTTCATTATGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQGSGLH*FIMLFF
Trigger: GAAGAAGAGCATAATGAAGCAATGCAGCCCACTGCC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTGGCAGTGGGCTGCATTaGTTCATTATGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGGSGLH*FIMLFF
Trigger: GAAGAAGAGCATAATGAAGCAATGCAGCCCACTGCC...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTCATTGGCAGTGGGCTaGATTGCTTCATTATGCTCT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWSLAVG*IASLCS
Trigger: AGAGCATAATGAAGCAATGCAGCCCACTGCCAATGA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAAGTCCTCATCTGGGTTaGCAATGCAGTCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQSPHLG*QCSLSQ
Trigger: TTGACTCAGACTGCATTGGCAACCCAGATGAGGACT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCTTGCTCCCCTTGATTaGATTCAATTGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWLAPLD*IQLCCL
Trigger: CAAGCAGCACAATTGAATGCAATCAAGGGGAGCAAG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATCAGCGCTACAACCTTaGTCAGTGGTTTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQSALQP*SVVLAL
Trigger: CAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCTAAAACCTTCTCCTTaGTTTCAGCGCTACAACCTT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMALKPSP*FQRYNL
Trigger: AAGGTTGTAGCGCTGAAAGCAAGGAGAAGGTTTTAG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGATCAGGAAGCTTGCTaGCTTCTAAAACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWDQEAC*LLKPSP
Trigger: AGGAGAAGGTTTTAGAAGGCAGCAAGCTTCCTGATC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCTTGATCAGGAAGCTTaGTGCCTTCTAAAACCTTCT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMALDQEA*CLLKPS
Trigger: AGAAGGTTTTAGAAGGCAGCAAGCTTCCTGATCAAG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGATGTGTTCGCTGACTaGCTTCTCTTGATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQDVFAD*LLLIRK
Trigger: CTTCCTGATCAAGAGAAGGCAGTCAGCGAACACATC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAATAATGCCGGGCGTGTaGTGGGATGTTTGCATATCT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQIMPGV*WDVCIS
Trigger: AGATATGCAAACATCCCAGCACACGCCCGGCATTAT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTATAATGCCGGGCGTGTaGTGGGATGTTTGCATATCT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGIMPGV*WDVCIS
Trigger: AGATATGCAAACATCCCAGCACACGCCCGGCATTAT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAATTGGATGTAGAGAATaGCAGCTGTCTGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQIGCRE*QLSESR
Trigger: CCTGCTCTCAGACAGCTGCCATTCTCTACATCCAAT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCATCAGCAGGCAAGCTaGAAATATACTCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAHQQAS*KYTHCP
Trigger: AGGACAATGAGTATATTTCCAGCTTGCCTGCTGATG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTGGCAGCAATGCTATTTaGGTCAACCTCGCTGACATA +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGGSNAI*VNLADI
Trigger: TATGTCAGCGAGGTTGACCCAAATAGCATTGCTGCC...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACCACCTCATTGGCAGTaGGCTGCATTGCTTCATTAT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQPPHWQ*AALLHY
Trigger: ATAATGAAGCAATGCAGCCCACTGCCAATGAGGTGG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTCAAAGATGTGCTATTaGGGTCCTCGGCTGCATTCT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGSKMCY*GPRLHS
Trigger: AGAATGCAGCCGAGGACCCCAATAGCACATCTTTGA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCAGATGTCTCCATACTaGTCTGTCACTTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGQMSPY*SVTFWS
Trigger: GCTCCAGAAAGTGACAGACCAGTATGGAGACATCTG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACAGATGTCTCCATACTaGTCTGTCACTTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQQMSPY*SVTFWS
Trigger: GCTCCAGAAAGTGACAGACCAGTATGGAGACATCTG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTGGTTTTGGCTTTGGTaGAGGTCGACTCTTTACTGC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGWFWLW*RSTLYC
Trigger: GCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCAGTGGTTTTGGCTTTaGTGGAGGTCGACTCTTTAC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGQWFWL*WRSTLY
Trigger: GTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTACAACCTTGCTCAGTaGTTTTGGCTTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGYNLAQ*FWLWWR
Trigger: CCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATACAACCTTGCTCAGTaGTTTTGGCTTTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQYNLAQ*FWLWWR
Trigger: CCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAATGCCGGGCGTGTGCTaGGATGTTTGCATATCTATA +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQMPGVC*DVCISI
Trigger: TATAGATATGCAAACATCCCAGCACACGCCCGGCAT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCATTCGGTCATACAGTaGTCACCGACAAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGHSVIQ*SPTRRH
Trigger: ATGCCTTCTTGTCGGTGACCACTGTATGACCGAATG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGATCACCCTCCAGACTTaGCTACTGTTTTTCATCAGT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWITLQT*LLFFIS
Trigger: ACTGATGAAAAACAGTAGTCAAGTCTGGAGGGTGAT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTTCATGAGTGGCCTTTaGAAGATCCTTCCCATTGAC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGFMSGL*KILPID
Trigger: GTCAATGGGAAGGATCTTTCAAAGGCCACTCATGAA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTAGGCTCTCATTGTACTaGAGTTCAACACTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGRLSLY*SSTLPR
Trigger: TCTGGGAAGTGTTGAACTTCAGTACAATGAGAGCCT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTGTTGCCAATGCAGTCTaGGTCAATGTATTCACCAGA +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGVANAV*VNVFTR
Trigger: TCTGGTGAATACATTGACTCAGACTGCATTGGCAAC...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTTCAATTGTGCTGCTTaGGTAATACAGGTCATACTC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAFNCAA*VIQVIL
Trigger: GAGTATGACCTGTATTACTCAAGCAGCACAATTGAA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGCCTGCATGATATTCTaGCACTCAAGCTCAATGTTT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTACMIF*HSSSMF
Trigger: AAACATTGAGCTTGAGTGTCAGAATATCATGCAGGC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGTTTGCATATCTATATaGGGAGCTGTGGTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWVCISI*GAVVRR
Trigger: TCTCCTTACCACAGCTCCTCATATAGATATGCAAAC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACCACCTACACTTTACTaGGACAAAGACAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQPPTLY*DKDNGH
Trigger: ATGGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTGCATTGCTTCATTATaGTCTTCTTCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMACIASL*SSSNIS
Trigger: GGAGATGTTGGAAGAAGAGCATAATGAAGCAATGCA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATCATTGGCAGTGGGCTaGATTGCTTCATTATGCTCT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQSLAVG*IASLCS
Trigger: AGAGCATAATGAAGCAATGCAGCCCACTGCCAATGA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTGGGTGGCTGCCATTGTaGTTCTCAGGTTTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGGWLPL*FSGFSY
Trigger: ATAAGAAAAACCTGAGAAGCACAATGGCAGCCACCC...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTGATCAGGAAGCTTGCTaGCTTCTAAAACCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGDQEAC*LLKPSP
Trigger: AGGAGAAGGTTTTAGAAGGCAGCAAGCTTCCTGATC...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACTTGATCAGGAAGCTTaGTGCCTTCTAAAACCTTCT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTLDQEA*CLLKPS
Trigger: AGAAGGTTTTAGAAGGCAGCAAGCTTCCTGATCAAG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCTAAAATCAGTCGCATaGATTCCATTCATTCGGTCA +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMALKSVA*IPFIRS
Trigger: TGACCGAATGAATGGAATGCATGCGACTGATTTTAG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTACTCTCCATCAGGTTaGGAACACTGGCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGYSPSG*EHWQFL
Trigger: GAGAAATTGCCAGTGTTCCCAACCTGATGGAGAGTA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCTTGTCAGACTTTTCTaGATGCTCCATGATGTCATC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWLVRLF*MLHDVI
Trigger: GATGACATCATGGAGCATCCAGAAAAGTCTGACAAG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACTTGTCAGACTTTTCTaGATGCTCCATGATGTCATC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTLVRLF*MLHDVI
Trigger: GATGACATCATGGAGCATCCAGAAAAGTCTGACAAG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTATCACCCTCCAGACTTaGCTACTGTTTTTCATCAGT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGITLQT*LLFFIS
Trigger: ACTGATGAAAAACAGTAGTCAAGTCTGGAGGGTGAT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGAGGTCATACTCTCCATaGTTTCGAATCTTGCATTTG +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWRSYSP*FRILHL
Trigger: CAAATGCAAGATTCGAAATCATGGAGAGTATGACCT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATTCAATTGTGCTGCTTaGGTAATACAGGTCATACTC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTFNCAA*VIQVIL
Trigger: GAGTATGACCTGTATTACTCAAGCAGCACAATTGAA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTGCCTGCATGATATTCTaGCACTCAAGCTCAATGTTT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGACMIF*HSSSMF
Trigger: AAACATTGAGCTTGAGTGTCAGAATATCATGCAGGC...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGTTTGCATATCTATATaGGGAGCTGTGGTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQVCISI*GAVVRR
Trigger: TCTCCTTACCACAGCTCCTCATATAGATATGCAAAC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGATAAAAACGCCACATTaGACGAGGCAATCATACTCT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWIKTPH*TRQSYS
Trigger: AGAGTATGATTGCCTCGTTCAATGTGGCGTTTTTAT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCTCTTTTCTGAAAAGTaGACAAATTGCAGCCCATTC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWLFSEK*TNCSPF
Trigger: GAATGGGCTGCAATTTGTGCACTTTTCAGAAAAGAG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACTCTTTTCTGAAAAGTaGACAAATTGCAGCCCATTC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTLFSEK*TNCSPF
Trigger: GAATGGGCTGCAATTTGTGCACTTTTCAGAAAAGAG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCATCTGGGTTGCCAATaGAGTCTGAGTCAATGTATT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGHLGCQ*SLSQCI
Trigger: AATACATTGACTCAGACTGCATTGGCAACCCAGATG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACATCTGGGTTGCCAATaGAGTCTGAGTCAATGTATT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQHLGCQ*SLSQCI
Trigger: AATACATTGACTCAGACTGCATTGGCAACCCAGATG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATCTAGCTTTCCCCTTTaGATATCTATGCTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTSSFPL*ISMLVL
Trigger: TAACACCAGCATAGATATGCAAAGGGGAAAGCTAGA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTCTAGCTTTCCCCTTTaGATATCTATGCTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWSSFPL*ISMLVL
Trigger: TAACACCAGCATAGATATGCAAAGGGGAAAGCTAGA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACTAAAACCTTCTCCTTaGTTTCAGCGCTACAACCTT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQLKPSP*FQRYNL
Trigger: AAGGTTGTAGCGCTGAAAGCAAGGAGAAGGTTTTAG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACTAAAATCAGTCGCATaGATTCCATTCATTCGGTCA +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTLKSVA*IPFIRS
Trigger: TGACCGAATGAATGGAATGCATGCGACTGATTTTAG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACATCAGCAGGCAAGCTaGAAATATACTCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQHQQAS*KYTHCP
Trigger: AGGACAATGAGTATATTTCCAGCTTGCCTGCTGATG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCTTGTCAGACTTTTCTaGATGCTCCATGATGTCATC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGLVRLF*MLHDVI
Trigger: GATGACATCATGGAGCATCCAGAAAAGTCTGACAAG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAAGGTCATACTCTCCATaGTTTCGAATCTTGCATTTG +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQRSYSP*FRILHL
Trigger: CAAATGCAAGATTCGAAATCATGGAGAGTATGACCT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTTCAATTGTGCTGCTTaGGTAATACAGGTCATACTC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGFNCAA*VIQVIL
Trigger: GAGTATGACCTGTATTACTCAAGCAGCACAATTGAA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTGCATTGCTTCATTATaGTCTTCTTCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGCIASL*SSSNIS
Trigger: GGAGATGTTGGAAGAAGAGCATAATGAAGCAATGCA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTGCATTCAATTGTGCTaGTTGAGTAATACAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWCIQLC*LSNTGH
Trigger: ATGACCTGTATTACTCAAGCAGCACAATTGAATGCA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATGCATTCAATTGTGCTaGTTGAGTAATACAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTCIQLC*LSNTGH
Trigger: ATGACCTGTATTACTCAAGCAGCACAATTGAATGCA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGATTGCATTCAATTGTaGTGCTTGAGTAATACAGGT +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTDCIQL*CLSNTG
Trigger: ACCTGTATTACTCAAGCAGCACAATTGAATGCAATC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGATTGCATTCAATTGTaGTGCTTGAGTAATACAGGT +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWDCIQL*CLSNTG
Trigger: ACCTGTATTACTCAAGCAGCACAATTGAATGCAATC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTCTAGCTTTCCCCTTTaGATATCTATGCTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGSSFPL*ISMLVL
Trigger: TAACACCAGCATAGATATGCAAAGGGGAAAGCTAGA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACTAAAATCAGTCGCATaGATTCCATTCATTCGGTCA +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQLKSVA*IPFIRS
Trigger: TGACCGAATGAATGGAATGCATGCGACTGATTTTAG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTTTGCATATCTATGCTaGTGTTATAATTCCGGAATC +
Preference number: 4 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAFAYLC*CYNSGI
Trigger: GATTCCGGAATTATAACACCAGCATAGATATGCAAA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGAACTGTCAACCACTGTaGACAAGGAAAATAAAACAC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWNCQPL*TRKIKH
Trigger: GTGTTTTATTTTCCTTGTCCACAGTGGTTGACAGTT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402685.7
ENST00000649474.1
CDS-3UTR TCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTACAAGATGTGGCACATaGTTTATTACGAACAGGTTT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGTRCGT*FITNRF
Trigger: AAACCTGTTCGTAATAAATCATGTGCCACATCTTGT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTGCATTCAATTGTGCTaGTTGAGTAATACAGGTCAT +
Preference number: 4 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGCIQLC*LSNTGH
Trigger: ATGACCTGTATTACTCAAGCAGCACAATTGAATGCA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGATTGCATTCAATTGTaGTGCTTGAGTAATACAGGT +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQDCIQL*CLSNTG
Trigger: ACCTGTATTACTCAAGCAGCACAATTGAATGCAATC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATTTGCATATCTATGCTaGTGTTATAATTCCGGAATC +
Preference number: 4 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTFAYLC*CYNSGI
Trigger: GATTCCGGAATTATAACACCAGCATAGATATGCAAA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CCA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTTTGCATATCTATGCTaGTGTTATAATTCCGGAATC +
Preference number: 4 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWFAYLC*CYNSGI
Trigger: GATTCCGGAATTATAACACCAGCATAGATATGCAAA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR GCA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACCAACATGTCAACAATaGCAAAGGTTTAAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQPTCQQ*QRFKEK
Trigger: TTTTTCCTTAAACCTTTGGCATTGTTGACATGTTGG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298919.7
CDS TCA 90 bp CGCAGCCGCGGGCGCGGTAGTCGCACTGGACTCGCAGCTTCTGGATaGGGCTGCGCAGCGGCAGCACCCGGTACAGCTCGCCGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: RSRGRGSRTGLAASG*GCAAAAPGTARRAP
Trigger: TGGCGCCCGGCGAGCTGTACCGGGTGCTGCCGCTGCGCAGCCTCATCCAGAAGCTGCGAGTCCAGTGCGACTACCGCGCCCGCGGCTGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS GCA 90 bp GTGAACTTCTCCTGGTACCTGCGCGCCGTGAGCTGCACCTCGCCCTaGAGCGCCCAGAGCTGCGCCAGCAGCGCCTTCTCGCGCCGCCTC +
Preference number: 5 (lower is better)
Translates to: VNFSWYLRAVSCTSP*SAQSCASSAFSRRL
Trigger: GAGGCGGCGCGAGAAGGCGCTGCTGGCGCAGCTCTGGGCGCTGCAGGGCGAGGTGCAGCTCACGGCGCGCAGGTACCAGGAGAAGTTCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS GCA 90 bp GCCATGTATTGGGTGAACTTCTCCTGGTACCTGCGCGCCGTGAGCTaGACCTCGCCCTGCAGCGCCCAGAGCTGCGCCAGCAGCGCCTTC +
Preference number: 5 (lower is better)
Translates to: AMYWVNFSWYLRAVS*TSPCSAQSCASSAF
Trigger: GAAGGCGCTGCTGGCGCAGCTCTGGGCGCTGCAGGGCGAGGTGCAGCTCACGGCGCGCAGGTACCAGGAGAAGTTCACCCAATACATGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS TCA 90 bp TCCCTGCGGTGGCCGCCACCGAGGTCGCCGACGAAGTTGCGGACGTaGGCCATGTATTGGGTGAACTTCTCCTGGTACCTGCGCGCCGTG +
Preference number: 5 (lower is better)
Translates to: SLRWPPPRSPTKLRT*AMYWVNFSWYLRAV
Trigger: CACGGCGCGCAGGTACCAGGAGAAGTTCACCCAATACATGGCTCACGTCCGCAACTTCGTCGGCGACCTCGGTGGCGGCCACCGCAGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS GCA 90 bp GAGTGTCTTGGCTCTGCCCCAGGTCTCTCTTGCTCTTCAAAGATGTaGTATTGGGGTCCTCGGCTGCATTCTCCTGCTCTGAGCTCTCAT +
Preference number: 5 (lower is better)
Translates to: ECLGSAPGLSCSSKM*YWGPRLHSPALSSH
Trigger: ATGAGAGCTCAGAGCAGGAGAATGCAGCCGAGGACCCCAATAGCACATCTTTGAAGAGCAAGAGAGACCTGGGGCAGAGCCAAGACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CCA 90 bp CCTTGCTTTCAGCGCTACAACCTTGCTCAGTGGTTTTGGCTTTGGTaGAGGTCGACTCTTTACTGCTCTGTCCGGAAGAGGACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: PCFQRYNLAQWFWLW*RSTLYCSVRKRTGW
Trigger: CCACCCAGTCCTCTTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAAGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 90 bp GTTCAACACTTCCCAGAGTGTCTTGGCTCTGCCCCAGGTCTCTCTTaGTCTTCAAAGATGTGCTATTGGGGTCCTCGGCTGCATTCTCCT +
Preference number: 5 (lower is better)
Translates to: VQHFPECLGSAPGLS*SSKMCYWGPRLHSP
Trigger: AGGAGAATGCAGCCGAGGACCCCAATAGCACATCTTTGAAGAGCAAGAGAGACCTGGGGCAGAGCCAAGACACTCTGGGAAGTGTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 90 bp AACCTTGCTCAGTGGTTTTGGCTTTGGTGGAGGTCGACTCTTTACTaGTCTGTCCGGAAGAGGACTGGGTGGCTGCCATTGTGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: NLAQWFWLWWRSTLY*SVRKRTGWLPLCFS
Trigger: TGAGAAGCACAATGGCAGCCACCCAGTCCTCTTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CCA 90 bp TCTCCTTGCTTTCAGCGCTACAACCTTGCTCAGTGGTTTTGGCTTTaGTGGAGGTCGACTCTTTACTGCTCTGTCCGGAAGAGGACTGGG +
Preference number: 5 (lower is better)
Translates to: SPCFQRYNLAQWFWL*WRSTLYCSVRKRTG
Trigger: CCCAGTCCTCTTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAAGCAAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CCA 90 bp GCTTTGGTGGAGGTCGACTCTTTACTGCTCTGTCCGGAAGAGGACTaGGTGGCTGCCATTGTGCTTCTCAGGTTTTTCTTATTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: ALVEVDSLLLCPEED*VAAIVLLRFFLLVR
Trigger: CCTCACCAATAAGAAAAACCTGAGAAGCACAATGGCAGCCACCCAGTCCTCTTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 90 bp GGAGGTCGACTCTTTACTGCTCTGTCCGGAAGAGGACTGGGTGGCTaGCATTGTGCTTCTCAGGTTTTTCTTATTGGTGAGGTTGATCAC +
Preference number: 5 (lower is better)
Translates to: GGRLFTALSGRGLGG*HCASQVFLIGEVDH
Trigger: GTGATCAACCTCACCAATAAGAAAAACCTGAGAAGCACAATGGCAGCCACCCAGTCCTCTTCCGGACAGAGCAGTAAAGAGTCGACCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 90 bp ACCGCTGTTAGCTGGAAGCGTAAGCCAGAGTGGTGTGTAGCAGCATaGTCTTCTTCGCTTTCCCTAAGTATCTTGCACTCACGGATACAC +
Preference number: 5 (lower is better)
Translates to: TAVSWKRKPEWCVAA*SSSLSLSILHSRIH
Trigger: GTGTATCCGTGAGTGCAAGATACTTAGGGAAAGCGAAGAAGAGCATGCTGCTACACACCACTCTGGCTTACGCTTCCAGCTAACAGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539469.6
ENST00000649474.1
CDS CCA 90 bp AAACCTTCTCCTTGCTTTCAGCGCTACAACCTTGCTCAGTGGTTTTaGCTTTGGTGGAGGTCGACTCTTTACTGCTCTGTCCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: KPSPCFQRYNLAQWF*LWWRSTLYCSVRKR
Trigger: CCTCTTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAAGCAAGGAGAAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CCA 90 bp TTCCATTCATTCGGTCATACAGTGGTCACCGACAAGAAGGCATTATaGACTCTCGTGCCATCTGGAGACTTGGCCCCATGGGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: FHSFGHTVVTDKKAL*TLVPSGDLAPWVIS
Trigger: ACTGATGACCCATGGGGCCAAGTCTCCAGATGGCACGAGAGTCCATAATGCCTTCTTGTCGGTGACCACTGTATGACCGAATGAATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS TCA 90 bp CTTCAAAGATGTGCTATTGGGGTCCTCGGCTGCATTCTCCTGCTCTaGGCTCTCATCATTTCGCAAGCTTTCATCTGTACGTCCTACTCC +
Preference number: 5 (lower is better)
Translates to: LQRCAIGVLGCILLL*ALIISQAFICTSYS
Trigger: GGAGTAGGACGTACAGATGAAAGCTTGCGAAATGATGAGAGCTCAGAGCAGGAGAATGCAGCCGAGGACCCCAATAGCACATCTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CCA 90 bp TCATCAGTCACTTCAGTCCAGAAACACAGACAAACCGCTGTTAGCTaGAAGCGTAAGCCAGAGTGGTGTGTAGCAGCATGCTCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: SSVTSVQKHRQTAVS*KRKPEWCVAACSSS
Trigger: CGAAGAAGAGCATGCTGCTACACACCACTCTGGCTTACGCTTCCAGCTAACAGCGGTTTGTCTGTGTTTCTGGACTGAAGTGACTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000539469.6
ENST00000649474.1
CDS CCA 90 bp CTTCTAAAACCTTCTCCTTGCTTTCAGCGCTACAACCTTGCTCAGTaGTTTTGGCTTTGGTGGAGGTCGACTCTTTACTGCTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: LLKPSPCFQRYNLAQ*FWLWWRSTLYCSVR
Trigger: CCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAAGCAAGGAGAAGGTTTTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGGCTGCTCCACCTCATaGGCAGTGGGCTGCATTGCT +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAGCSTS*AVGCIA
Trigger: AGCAATGCAGCCCACTGCCAATGAGGTGGAGCAGCC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTACCTGGCCGCACAGTTaGCACTCCAGAGCCGGGTCC +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGTWPHS*HSRAGS
Trigger: GGACCCGGCTCTGGAGTGCAAACTGTGCGGCCAGGT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS TCA 90 bp CAGTCTGAGTCAATGTATTCACCAGATACGAGGCTCTCATTGTACTaGAGTTCAACACTTCCCAGAGTGTCTTGGCTCTGCCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: QSESMYSPDTRLSLY*SSTLPRVSWLCPRS
Trigger: AGACCTGGGGCAGAGCCAAGACACTCTGGGAAGTGTTGAACTTCAGTACAATGAGAGCCTCGTATCTGGTGAATACATTGACTCAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 90 bp TTGCTCTTCAAAGATGTGCTATTGGGGTCCTCGGCTGCATTCTCCTaGTCTGAGCTCTCATCATTTCGCAAGCTTTCATCTGTACGTCCT +
Preference number: 5 (lower is better)
Translates to: LLFKDVLLGSSAAFS*SELSSFRKLSSVRP
Trigger: AGGACGTACAGATGAAAGCTTGCGAAATGATGAGAGCTCAGAGCAGGAGAATGCAGCCGAGGACCCCAATAGCACATCTTTGAAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 90 bp CCTTCTCTTGATCAGGAAGCTTGCTGCCTTCTAAAACCTTCTCCTTaGTTTCAGCGCTACAACCTTGCTCAGTGGTTTTGGCTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: PSLDQEACCLLKPSP*FQRYNLAQWFWLWW
Trigger: CCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAAGCAAGGAGAAGGTTTTAGAAGGCAGCAAGCTTCCTGATCAAGAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CCA 90 bp CATTGTGCTTCTCAGGTTTTTCTTATTGGTGAGGTTGATCACCCTTaGAAGGGAACTGTCAGGGGAACGGTCTACAGTGAGCGGAGTACT +
Preference number: 5 (lower is better)
Translates to: HCASQVFLIGEVDHP*KGTVRGTVYSERST
Trigger: AGTACTCCGCTCACTGTAGACCGTTCCCCTGACAGTTCCCTTCCAAGGGTGATCAACCTCACCAATAAGAAAAACCTGAGAAGCACAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CCA 90 bp CAGAAACACAGACAAACCGCTGTTAGCTGGAAGCGTAAGCCAGAGTaGTGTGTAGCAGCATGCTCTTCTTCGCTTTCCCTAAGTATCTTG +
Preference number: 5 (lower is better)
Translates to: QKHRQTAVSWKRKPE*CVAACSSSLSLSIL
Trigger: CAAGATACTTAGGGAAAGCGAAGAAGAGCATGCTGCTACACACCACTCTGGCTTACGCTTCCAGCTAACAGCGGTTTGTCTGTGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539469.6
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGGCTGCTCCACCTCATaGGCAGTGGGCTGCATTGCT +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTGCSTS*AVGCIA
Trigger: AGCAATGCAGCCCACTGCCAATGAGGTGGAGCAGCC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGGCTGCTCCACCTCATaGGCAGTGGGCTGCATTGCT +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWGCSTS*AVGCIA
Trigger: AGCAATGCAGCCCACTGCCAATGAGGTGGAGCAGCC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGACTTCCCAGAGTGTCTaGGCTCTGCCCCAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWTSQSV*ALPQVS
Trigger: AGAGACCTGGGGCAGAGCCAAGACACTCTGGGAAGT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACTTCCCAGAGTGTCTaGGCTCTGCCCCAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTTSQSV*ALPQVS
Trigger: AGAGACCTGGGGCAGAGCCAAGACACTCTGGGAAGT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCCTTGCTCAGTGGTTTaGGCTTTGGTGGAGGTCGAC +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAPCSVV*ALVEVD
Trigger: GTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS TCA 90 bp CTGCCTGAATCTTTCACAGTCCTCATCTGGGTTGCCAATGCAGTCTaGGTCAATGTATTCACCAGATACGAGGCTCTCATTGTACTGAAG +
Preference number: 5 (lower is better)
Translates to: LPESFTVLIWVANAV*VNVFTRYEALIVLK
Trigger: CTTCAGTACAATGAGAGCCTCGTATCTGGTGAATACATTGACTCAGACTGCATTGGCAACCCAGATGAGGACTGTGAAAGATTCAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 90 bp TCATACTCTACCGAAACTGGTAGCATCCTCCTAAAATCAGTCGCATaGATTCCATTCATTCGGTCATACAGTGGTCACCGACAAGAAGGC +
Preference number: 5 (lower is better)
Translates to: SYSTETGSILLKSVA*IPFIRSYSGHRQEG
Trigger: GCCTTCTTGTCGGTGACCACTGTATGACCGAATGAATGGAATGCATGCGACTGATTTTAGGAGGATGCTACCAGTTTCGGTAGAGTATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGATGGGCTCCTTGGCATaGCGAAAAGCTTCCACTGCC +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWMGSLA*RKASTA
Trigger: GGCAGTGGAAGCTTTTCGCAATGCCAAGGAGCCCAT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCAGGCCCAGCTTCTCTaGACTGCTAACACGACACAA +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAQAQLL*TANTTQ
Trigger: TTGTGTCGTGTTAGCAGTCAAGAGAAGCTGGGCCTG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCGCTGAATCTCTGGCCTaGCAACAAGCAGCACGATTC +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAAESLA*QQAARF
Trigger: GAATCGTGCTGCTTGTTGCAAGGCCAGAGATTCAGC...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAACTTCCCAGAGTGTCTaGGCTCTGCCCCAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQTSQSV*ALPQVS
Trigger: AGAGACCTGGGGCAGAGCCAAGACACTCTGGGAAGT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCATGCTCCACTCCCTCTaGCTCCCCTTGATTGCATTC +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAMLHSL*LPLIAF
Trigger: GAATGCAATCAAGGGGAGCAAGAGGGAGTGGAGCAT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACCTTGCTCAGTGGTTTaGGCTTTGGTGGAGGTCGAC +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTPCSVV*ALVEVD
Trigger: GTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGCTGACTGCCTTCTCTaGATCAGGAAGCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWADCLL*IRKLAA
Trigger: GGCAGCAAGCTTCCTGATCAAGAGAAGGCAGTCAGC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCCACTCCGCTCTTCCTaGATCTTTAAGGCACGTTCC +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAPLRSS*IFKARS
Trigger: GGAACGTGCCTTAAAGATCAAGGAAGAGCGGAGTGG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGTGCCATCTGGAGACTaGGCCCCATGGGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQVPSGD*APWVIS
Trigger: ACTGATGACCCATGGGGCCAAGTCTCCAGATGGCAC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTGTGCCATCTGGAGACTaGGCCCCATGGGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGVPSGD*APWVIS
Trigger: ACTGATGACCCATGGGGCCAAGTCTCCAGATGGCAC...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTATGGGCTCCTTGGCATaGCGAAAAGCTTCCACTGCC +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGMGSLA*RKASTA
Trigger: GGCAGTGGAAGCTTTTCGCAATGCCAAGGAGCCCAT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGACCACAATGGGCTCCTaGGCATTGCGAAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWTTMGS*ALRKAS
Trigger: GGAAGCTTTTCGCAATGCCAAGGAGCCCATTGTGGT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACAGGCCCAGCTTCTCTaGACTGCTAACACGACACAA +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTQAQLL*TANTTQ
Trigger: TTGTGTCGTGTTAGCAGTCAAGAGAAGCTGGGCCTG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGCTGAATCTCTGGCCTaGCAACAAGCAGCACGATTC +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTAESLA*QQAARF
Trigger: GAATCGTGCTGCTTGTTGCAAGGCCAGAGATTCAGC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGCTGAATCTCTGGCCTaGCAACAAGCAGCACGATTC +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWAESLA*QQAARF
Trigger: GAATCGTGCTGCTTGTTGCAAGGCCAGAGATTCAGC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTGCCCCAGGTCTCTCTaGCTCTTCAAAGATGTGCTA +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMACPRSL*LFKDVL
Trigger: TAGCACATCTTTGAAGAGCAAGAGAGACCTGGGGCA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACAGTCCTCATCTGGGTaGCCAATGCAGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTQSSSG*PMQSES
Trigger: TGACTCAGACTGCATTGGCAACCCAGATGAGGACTG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGATGCTCCACTCCCTCTaGCTCCCCTTGATTGCATTC +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWMLHSL*LPLIAF
Trigger: GAATGCAATCAAGGGGAGCAAGAGGGAGTGGAGCAT...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAGCTGACTGCCTTCTCTaGATCAGGAAGCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQADCLL*IRKLAA
Trigger: GGCAGCAAGCTTCCTGATCAAGAGAAGGCAGTCAGC...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACCACTCCGCTCTTCCTaGATCTTTAAGGCACGTTCC +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTPLRSS*IFKARS
Trigger: GGAACGTGCCTTAAAGATCAAGGAAGAGCGGAGTGG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAACCACAATGGGCTCCTaGGCATTGCGAAAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQTTMGS*ALRKAS
Trigger: GGAAGCTTTTCGCAATGCCAAGGAGCCCATTGTGGT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACAGGCCCAGCTTCTCTaGACTGCTAACACGACACAA +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQQAQLL*TANTTQ
Trigger: TTGTGTCGTGTTAGCAGTCAAGAGAAGCTGGGCCTG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTCCTTCTCATGGTTGTaGGATGAGGATGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMASFSWL*DEDVAV
Trigger: CACTGCAACATCCTCATCCAACAACCATGAGAAGGA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTTCAAAGATGTGCTATaGGGGTCCTCGGCTGCATTC +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWFKDVL*GSSAAF
Trigger: GAATGCAGCCGAGGACCCCAATAGCACATCTTTGAA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACAGTCCTCATCTGGGTaGCCAATGCAGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQQSSSG*PMQSES
Trigger: TGACTCAGACTGCATTGGCAACCCAGATGAGGACTG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCAGTCCTCATCTGGGTaGCCAATGCAGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGQSSSG*PMQSES
Trigger: TGACTCAGACTGCATTGGCAACCCAGATGAGGACTG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACTGGGTGGCTGCCATaGTGCTTCTCAGGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTTGWLP*CFSGFS
Trigger: AGAAAAACCTGAGAAGCACAATGGCAGCCACCCAGT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTCAGTGGTTTTGGCTTaGGTGGAGGTCGACTCTTTA +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMASVVLA*VEVDSL
Trigger: TAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCGTGTGCTGGGATGTTaGCATATCTATATGAGGAGC +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMARVLGC*HIYMRS
Trigger: GCTCCTCATATAGATATGCAAACATCCCAGCACACG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACCACTCCGCTCTTCCTaGATCTTTAAGGCACGTTCC +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQPLRSS*IFKARS
Trigger: GGAACGTGCCTTAAAGATCAAGGAAGAGCGGAGTGG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS TCA 90 bp CTCCACTCCCTCTTGCTCCCCTTGATTGCATTCAATTGTGCTGCTTaGGTAATACAGGTCATACTCTCCATGATTTCGAATCTTGCATTT +
Preference number: 5 (lower is better)
Translates to: LHSLLLPLIAFNCAA*VIQVILSMISNLAF
Trigger: AAATGCAAGATTCGAAATCATGGAGAGTATGACCTGTATTACTCAAGCAGCACAATTGAATGCAATCAAGGGGAGCAAGAGGGAGTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCATACTCTCCATCAGGTaGGGAACACTGGCAATTTCT +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAILSIR*GTLAIS
Trigger: AGAAATTGCCAGTGTTCCCAACCTGATGGAGAGTAT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGAAAGATCCTTCCCATaGACAGTGGATGGCCAACAT +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTERSFP*TVDGQH
Trigger: ATGTTGGCCATCCACTGTCAATGGGAAGGATCTTTC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298919.7
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTGGCAGTGGGCTGCATaGCTTCATTATGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWWQWAA*LHYALL
Trigger: AAGAAGAGCATAATGAAGCAATGCAGCCCACTGCCA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCTTCTTCTTGCTTTTTaGGCTGCTCCACCTCATTGG +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWLLLAF*AAPPHW
Trigger: CCAATGAGGTGGAGCAGCCAAAAAAGCAAGAAGAAG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACTTCTTCTTGCTTTTTaGGCTGCTCCACCTCATTGG +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTLLLAF*AAPPHW
Trigger: CCAATGAGGTGGAGCAGCCAAAAAAGCAAGAAGAAG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCTGTCCTTCTCATGGTaGTTGGATGAGGATGTTGCA +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWLSFSW*LDEDVA
Trigger: TGCAACATCCTCATCCAACAACCATGAGAAGGACAG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTTCAAAGATGTGCTATaGGGGTCCTCGGCTGCATTC +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGFKDVL*GSSAAF
Trigger: GAATGCAGCCGAGGACCCCAATAGCACATCTTTGAA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTGCCCCAGGTCTCTCTaGCTCTTCAAAGATGTGCTA +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGCPRSL*LFKDVL
Trigger: TAGCACATCTTTGAAGAGCAAGAGAGACCTGGGGCA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTTTCGAATCTTGCATTaGAGCTCCAAGAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWFRILH*SSKSCL
Trigger: CAGGCAGCTCTTGGAGCTCAAATGCAAGATTCGAAA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATCCCTCTTGCTCCCCTaGATTGCATTCAATTGTGCT +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTSLLLP*IAFNCA
Trigger: AGCACAATTGAATGCAATCAAGGGGAGCAAGAGGGA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTCCCTCTTGCTCCCCTaGATTGCATTCAATTGTGCT +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWSLLLP*IAFNCA
Trigger: AGCACAATTGAATGCAATCAAGGGGAGCAAGAGGGA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTACTGGGTGGCTGCCATaGTGCTTCTCAGGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGTGWLP*CFSGFS
Trigger: AGAAAAACCTGAGAAGCACAATGGCAGCCACCCAGT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATCAGTGGTTTTGGCTTaGGTGGAGGTCGACTCTTTA +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTSVVLA*VEVDSL
Trigger: TAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCTCTAAAACCTTCTCCTaGCTTTCAGCGCTACAACCT +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMASKTFS*LSALQP
Trigger: AGGTTGTAGCGCTGAAAGCAAGGAGAAGGTTTTAGA...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS CCA 90 bp GCAGAACTAAGATCCCACACATACTCTCCATCAGGTTGGGAACACTaGCAATTTCTCAATTTCATGCAGAATAGCATTGTTCAAGTCACA +
Preference number: 5 (lower is better)
Translates to: AELRSHTYSPSGWEH*QFLNFMQNSIVQVT
Trigger: TGTGACTTGAACAATGCTATTCTGCATGAAATTGAGAAATTGCCAGTGTTCCCAACCTGATGGAGAGTATGTGTGGGATCTTAGTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTCATGCAGAATAGCATaGTTCAAGTCACAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWSCRIA*FKSQLL
Trigger: CAGGAGCTGTGACTTGAACAATGCTATTCTGCATGA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTGGCAGTGGGCTGCATaGCTTCATTATGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGWQWAA*LHYALL
Trigger: AAGAAGAGCATAATGAAGCAATGCAGCCCACTGCCA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCAGTGGGCTGCATaGCTTCATTATGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQWQWAA*LHYALL
Trigger: AAGAAGAGCATAATGAAGCAATGCAGCCCACTGCCA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATCCTTCTCATGGTTGTaGGATGAGGATGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQSFSWL*DEDVAV
Trigger: CACTGCAACATCCTCATCCAACAACCATGAGAAGGA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTCCTTCTCATGGTTGTaGGATGAGGATGTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGSFSWL*DEDVAV
Trigger: CACTGCAACATCCTCATCCAACAACCATGAGAAGGA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACTGTCCTTCTCATGGTaGTTGGATGAGGATGTTGCA +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQLSFSW*LDEDVA
Trigger: TGCAACATCCTCATCCAACAACCATGAGAAGGACAG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCTGTCCTTCTCATGGTaGTTGGATGAGGATGTTGCA +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGLSFSW*LDEDVA
Trigger: TGCAACATCCTCATCCAACAACCATGAGAAGGACAG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATTTCGAATCTTGCATTaGAGCTCCAAGAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQFRILH*SSKSCL
Trigger: CAGGCAGCTCTTGGAGCTCAAATGCAAGATTCGAAA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATTCTTATTGGTGAGGTaGATCACCCTTGGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTFLLVR*ITLGRE
Trigger: TTCCCTTCCAAGGGTGATCAACCTCACCAATAAGAA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTTCAGCGCTACAACCTaGCTCAGTGGTTTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGFSATT*LSGFGF
Trigger: AAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATTCAGCGCTACAACCTaGCTCAGTGGTTTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQFSATT*LSGFGF
Trigger: AAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACATCTAAAACCTTCTCCTaGCTTTCAGCGCTACAACCT +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTSKTFS*LSALQP
Trigger: AGGTTGTAGCGCTGAAAGCAAGGAGAAGGTTTTAGA...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGTCTAAAACCTTCTCCTaGCTTTCAGCGCTACAACCT +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWSKTFS*LSALQP
Trigger: AGGTTGTAGCGCTGAAAGCAAGGAGAAGGTTTTAGA...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCGTGTGCTGGGATGTTaGCATATCTATATGAGGAGC +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGRVLGC*HIYMRS
Trigger: GCTCCTCATATAGATATGCAAACATCCCAGCACACG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCCTCAGTTCAATGATATaGATCTCCTTCTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMALSSMI*ISFLPS
Trigger: TGAGGGCAAGAAGGAGATCAATATCATTGAACTGAG...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAGAAAGATCCTTCCCATaGACCACTCATTCACAAGGA +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTERSFP*TTHSQG
Trigger: TCCTTGTGAATGAGTGGTCAATGGGAAGGATCTTTC...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAATCACCCTCCAGACTaGACTACTGTTTTTCATCAG +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTNHPPD*TTVFHQ
Trigger: CTGATGAAAAACAGTAGTCAAGTCTGGAGGGTGATT...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATCATGCAGAATAGCATaGTTCAAGTCACAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQSCRIA*FKSQLL
Trigger: CAGGAGCTGTGACTTGAACAATGCTATTCTGCATGA...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTTTCTTATTGGTGAGGTaGATCACCCTTGGAAGGGAA +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGFLLVR*ITLGRE
Trigger: TTCCCTTCCAAGGGTGATCAACCTCACCAATAAGAA...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCTCAGTTCAATGATATaGATCTCCTTCTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWLSSMI*ISFLPS
Trigger: TGAGGGCAAGAAGGAGATCAATATCATTGAACTGAG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCATATCACAGGAAGATaGTCCACCTACACTTTACTG +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWHITGR*STYTLL
Trigger: CAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp GTCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACACATATCACAGGAAGATaGTCCACCTACACTTTACTG +
Preference number: 5 (lower is better)
Translates to: VTTYHRKIVHLHFTETKTHITGR*STYTLL
Trigger: CAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATG...TGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGGAAAGATCCTTCCCATaGACCTCCATGATTTTGTCA +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWERSFP*TSMILS
Trigger: TGACAAAATCATGGAGGTCAATGGGAAGGATCTTTC...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAACTTTCCCTAAGTATCTaGCACTCACGGATACACACA +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQLSLSI*HSRIHT
Trigger: TGTGTGTATCCGTGAGTGCAAGATACTTAGGGAAAG...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649474.1
CDS CCA 90 bp CTTAATGAAGCAGAACTAAGATCCCACACATACTCTCCATCAGGTTaGGAACACTGGCAATTTCTCAATTTCATGCAGAATAGCATTGTT +
Preference number: 5 (lower is better)
Translates to: LNEAELRSHTYSPSG*EHWQFLNFMQNSIV
Trigger: AACAATGCTATTCTGCATGAAATTGAGAAATTGCCAGTGTTCCCAACCTGATGGAGAGTATGTGTGGGATCTTAGTTCTGCTTCATTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS CCA 90 bp CCTCATATTCAAAGTCTTCTGTTCTGTCTGCATCAGCAGGCAAGCTaGAAATATACTCATTGTCCTCATAAAATTCATGCTCCATTGGAT +
Preference number: 5 (lower is better)
Translates to: PHIQSLLFCLHQQAS*KYTHCPHKIHAPLD
Trigger: ATCCAATGGAGCATGAATTTTATGAGGACAATGAGTATATTTCCAGCTTGCCTGCTGATGCAGACAGAACAGAAGACTTTGAATATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTAATCACCCTCCAGACTaGACTACTGTTTTTCATCAG +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGNHPPD*TTVFHQ
Trigger: CTGATGAAAAACAGTAGTCAAGTCTGGAGGGTGATT...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS-3UTR CAA 90 bp ACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCCATTCAATTGTGCTGCTaGAGTAATACAGGTCATACT +
Preference number: 5 (lower is better)
Translates to: TYHRKIVHLHFTETKTMAIQLCC*SNTGHT
Trigger: AGTATGACCTGTATTACTCAAGCAGCACAATTGAAT...GGCCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCTCAGTTCAATGATATaGATCTCCTTCTTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGLSSMI*ISFLPS
Trigger: TGAGGGCAAGAAGGAGATCAATATCATTGAACTGAG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CAGTGGCTTTTATGTGTAAGACAAGATGTGGCACATGATTTATTACGAACAGGTCATATCACAGGAAGATaGTCCACCTACACTTTACTG +
Preference number: 5 (lower is better)
Translates to: QWLLCVRQDVAHDLLRTGHITGR*STYTLL
Trigger: CAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATG...ACCTGTTCGTAATAAATCATGTGCCACATCTTGTCTTACACATAAAAGCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS-3UTR CAA 90 bp CTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAATGGCGACCTCCTATAATATaGAATCCCAAAGTGTCATTT +
Preference number: 5 (lower is better)
Translates to: LHITGRLSTYTLLRQRQWRPPII*NPKVSF
Trigger: AAATGACACTTTGGGATTCAATATTATAGGAGGTCG...CCATTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS-3UTR CAA 90 bp TCACTACATATCACAGGAAGATTGTCCACCTACACTTTACTGAGACAAAGACAAATTCAATTGTGCTGCTaGAGTAATACAGGTCATACT +
Preference number: 5 (lower is better)
Translates to: SLHITGRLSTYTLLRQRQIQLCC*SNTGHT
Trigger: AGTATGACCTGTATTACTCAAGCAGCACAATTGAAT...TTGTCTTTGTCTCAGTAAAGTGTAGGTGGACAATCTTCCTGTGATATGTAGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000649474.1
CDS CCA 72 bp GGCAGCACCCGGTACAGCTCGCCGGGCGCCAAGGGCTaGCACTGCAGCGGGCACCGGCGCCTCCGCACCGCC +
Preference number: 6 (lower is better)
Translates to: GSTRYSSPGAKG*HCSGHRRLRTA
Trigger: GGCGGTGCGGAGGCGCCGGTGCCCGCTGCAGTGCCAGCCCTTGGCGCCCGGCGAGCTGTACCGGGTGCTGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS GCA 72 bp TCCTGGTACCTGCGCGCCGTGAGCTGCACCTCGCCCTaGAGCGCCCAGAGCTGCGCCAGCAGCGCCTTCTCG +
Preference number: 6 (lower is better)
Translates to: SWYLRAVSCTSP*SAQSCASSAFS
Trigger: CGAGAAGGCGCTGCTGGCGCAGCTCTGGGCGCTGCAGGGCGAGGTGCAGCTCACGGCGCGCAGGTACCAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS CAA 90 bp GCCGCCACCGAGGTCGCCGACGAAGTTGCGGACGTGAGCCATGTATaGGGTGAACTTCTCCTGGTACCTGCGCGCCGTGAGCTGCACCTC +
Preference number: 6 (lower is better)
Translates to: AATEVADEVADVSHV*GELLLVPARRELHL
Trigger: GAGGTGCAGCTCACGGCGCGCAGGTACCAGGAGAAGTTCACCCAATACATGGCTCACGTCCGCAACTTCGTCGGCGACCTCGGTGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS TCA 72 bp TGGCCGCCACCGAGGTCGCCGACGAAGTTGCGGACGTaGGCCATGTATTGGGTGAACTTCTCCTGGTACCTG +
Preference number: 6 (lower is better)
Translates to: WPPPRSPTKLRT*AMYWVNFSWYL
Trigger: CAGGTACCAGGAGAAGTTCACCCAATACATGGCTCACGTCCGCAACTTCGTCGGCGACCTCGGTGGCGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS CAA 72 bp GAGGTCGCCGACGAAGTTGCGGACGTGAGCCATGTATaGGGTGAACTTCTCCTGGTACCTGCGCGCCGTGAG +
Preference number: 6 (lower is better)
Translates to: EVADEVADVSHV*GELLLVPARRE
Trigger: CTCACGGCGCGCAGGTACCAGGAGAAGTTCACCCAATACATGGCTCACGTCCGCAACTTCGTCGGCGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS GCA 72 bp GGCTCTGCCCCAGGTCTCTCTTGCTCTTCAAAGATGTaGTATTGGGGTCCTCGGCTGCATTCTCCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: GSAPGLSCSSKM*YWGPRLHSPAL
Trigger: CAGAGCAGGAGAATGCAGCCGAGGACCCCAATAGCACATCTTTGAAGAGCAAGAGAGACCTGGGGCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS TCA 72 bp CCCTTGGAAGGGAACTGTCAGGGGAACGGTCTACAGTaGGCGGAGTACTTCTGCAGCTCTCAGCTGTGTTGT +
Preference number: 6 (lower is better)
Translates to: PLEGNCQGNGLQ*AEYFCSSQLCC
Trigger: ACAACACAGCTGAGAGCTGCAGAAGTACTCCGCTCACTGTAGACCGTTCCCCTGACAGTTCCCTTCCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 72 bp CAGTGGTTTTGGCTTTGGTGGAGGTCGACTCTTTACTaGTCTGTCCGGAAGAGGACTGGGTGGCTGCCATTG +
Preference number: 6 (lower is better)
Translates to: QWFWLWWRSTLY*SVRKRTGWLPL
Trigger: CAATGGCAGCCACCCAGTCCTCTTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 72 bp TGCCCCAGGTCTCTCTTGCTCTTCAAAGATGTGCTATaGGGGTCCTCGGCTGCATTCTCCTGCTCTGAGCTC +
Preference number: 6 (lower is better)
Translates to: CPRSLLLFKDVL*GSSAAFSCSEL
Trigger: GAGCTCAGAGCAGGAGAATGCAGCCGAGGACCCCAATAGCACATCTTTGAAGAGCAAGAGAGACCTGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 72 bp CAGTGGTCACCGACAAGAAGGCATTATGGACTCTCGTaGCATCTGGAGACTTGGCCCCATGGGTCATCAGTT +
Preference number: 6 (lower is better)
Translates to: QWSPTRRHYGLS*HLETWPHGSSV
Trigger: AACTGATGACCCATGGGGCCAAGTCTCCAGATGGCACGAGAGTCCATAATGCCTTCTTGTCGGTGACCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CCA 72 bp CAGCGCTACAACCTTGCTCAGTGGTTTTGGCTTTGGTaGAGGTCGACTCTTTACTGCTCTGTCCGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: QRYNLAQWFWLW*RSTLYCSVRKR
Trigger: CCTCTTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CCA 72 bp TTCGGTCATACAGTGGTCACCGACAAGAAGGCATTATaGACTCTCGTGCCATCTGGAGACTTGGCCCCATGG +
Preference number: 6 (lower is better)
Translates to: FGHTVVTDKKAL*TLVPSGDLAPW
Trigger: CCATGGGGCCAAGTCTCCAGATGGCACGAGAGTCCATAATGCCTTCTTGTCGGTGACCACTGTATGACCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 90 bp AGTTCAACACTTCCCAGAGTGTCTTGGCTCTGCCCCAGGTCTCTCTaGCTCTTCAAAGATGTGCTATTGGGGTCCTCGGCTGCATTCTCC +
Preference number: 6 (lower is better)
Translates to: SSTLPRVSWLCPRSL*LFKDVLLGSSAAFS
Trigger: GGAGAATGCAGCCGAGGACCCCAATAGCACATCTTTGAAGAGCAAGAGAGACCTGGGGCAGAGCCAAGACACTCTGGGAAGTGTTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS TCA 72 bp ATGATATTGATCTCCTTCTTGCCCTCACTGCCGCTCTaGGGGCTCTCCTTGAGACACTCTAACCTGCTTCGC +
Preference number: 6 (lower is better)
Translates to: MILISFLPSLPL*GLSLRHSNLLR
Trigger: GCGAAGCAGGTTAGAGTGTCTCAAGGAGAGCCCTCAGAGCGGCAGTGAGGGCAAGAAGGAGATCAATATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 90 bp GAAGAGGACTGGGTGGCTGCCATTGTGCTTCTCAGGTTTTTCTTATaGGTGAGGTTGATCACCCTTGGAAGGGAACTGTCAGGGGAACGG +
Preference number: 6 (lower is better)
Translates to: EEDWVAAIVLLRFFL*VRLITLGRELSGER
Trigger: CCGTTCCCCTGACAGTTCCCTTCCAAGGGTGATCAACCTCACCAATAAGAAAAACCTGAGAAGCACAATGGCAGCCACCCAGTCCTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 90 bp TTCTCCTTGCTTTCAGCGCTACAACCTTGCTCAGTGGTTTTGGCTTaGGTGGAGGTCGACTCTTTACTGCTCTGTCCGGAAGAGGACTGG +
Preference number: 6 (lower is better)
Translates to: FSLLSALQPCSVVLA*VEVDSLLLCPEEDW
Trigger: CCAGTCCTCTTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAAGCAAGGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 90 bp TGGGTGGCTGCCATTGTGCTTCTCAGGTTTTTCTTATTGGTGAGGTaGATCACCCTTGGAAGGGAACTGTCAGGGGAACGGTCTACAGTG +
Preference number: 6 (lower is better)
Translates to: WVAAIVLLRFFLLVR*ITLGRELSGERSTV
Trigger: CACTGTAGACCGTTCCCCTGACAGTTCCCTTCCAAGGGTGATCAACCTCACCAATAAGAAAAACCTGAGAAGCACAATGGCAGCCACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS TCA 72 bp GTCCGTCTGAGTGCTGGCATTCATAAGCTGCACTTCTaGAGCCATCCCATAGGCTGGTCTACTAAGAGGTGT +
Preference number: 6 (lower is better)
Translates to: VRLSAGIHKLHF*SHPIGWSTKRC
Trigger: ACACCTCTTAGTAGACCAGCCTATGGGATGGCTTCAGAAGTGCAGCTTATGAATGCCAGCACTCAGACGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000649474.1
CDS TCA 72 bp TGTGCTATTGGGGTCCTCGGCTGCATTCTCCTGCTCTaGGCTCTCATCATTTCGCAAGCTTTCATCTGTACG +
Preference number: 6 (lower is better)
Translates to: CAIGVLGCILLL*ALIISQAFICT
Trigger: CGTACAGATGAAAGCTTGCGAAATGATGAGAGCTCAGAGCAGGAGAATGCAGCCGAGGACCCCAATAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CCA 72 bp ACTTCAGTCCAGAAACACAGACAAACCGCTGTTAGCTaGAAGCGTAAGCCAGAGTGGTGTGTAGCAGCATGC +
Preference number: 6 (lower is better)
Translates to: TSVQKHRQTAVS*KRKPEWCVAAC
Trigger: GCATGCTGCTACACACCACTCTGGCTTACGCTTCCAGCTAACAGCGGTTTGTCTGTGTTTCTGGACTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000539469.6
ENST00000649474.1
CDS CCA 72 bp TTTCAGCGCTACAACCTTGCTCAGTGGTTTTGGCTTTaGTGGAGGTCGACTCTTTACTGCTCTGTCCGGAAG +
Preference number: 6 (lower is better)
Translates to: FQRYNLAQWFWL*WRSTLYCSVRK
Trigger: CTTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CCA 72 bp CCTTCTCCTTGCTTTCAGCGCTACAACCTTGCTCAGTaGTTTTGGCTTTGGTGGAGGTCGACTCTTTACTGC +
Preference number: 6 (lower is better)
Translates to: PSPCFQRYNLAQ*FWLWWRSTLYC
Trigger: GCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAAGCAAGGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 72 bp CTTTCAGCGCTACAACCTTGCTCAGTGGTTTTGGCTTaGGTGGAGGTCGACTCTTTACTGCTCTGTCCGGAA +
Preference number: 6 (lower is better)
Translates to: LSALQPCSVVLA*VEVDSLLLCPE
Trigger: TTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 90 bp AAAACCTTCTCCTTGCTTTCAGCGCTACAACCTTGCTCAGTGGTTTaGGCTTTGGTGGAGGTCGACTCTTTACTGCTCTGTCCGGAAGAG +
Preference number: 6 (lower is better)
Translates to: KTFSLLSALQPCSVV*ALVEVDSLLLCPEE
Trigger: CTCTTCCGGACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAAGCAAGGAGAAGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS TCA 72 bp GCGAAAAGCTTCCACTGCCTCTTCATGAGTGGCCTTTaGAAGATCCTTCCCATTGACAGTGGATGGCCAACA +
Preference number: 6 (lower is better)
Translates to: AKSFHCLFMSGL*KILPIDSGWPT
Trigger: TGTTGGCCATCCACTGTCAATGGGAAGGATCTTTCAAAGGCCACTCATGAAGAGGCAGTGGAAGCTTTTCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298919.7
CDS TCA 72 bp TCCTTGGCATTGCGAAAAGCTTCCACTGCCTCTTCATaGGTGGCCTTTGAAAGATCCTTCCCATTGACCTCC +
Preference number: 6 (lower is better)
Translates to: SLALRKASTASS*VAFERSFPLTS
Trigger: GGAGGTCAATGGGAAGGATCTTTCAAAGGCCACTCATGAAGAGGCAGTGGAAGCTTTTCGCAATGCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS TCA 72 bp TCCTTGGCATTGCGAAAAGCTTCCACTGCCTCTTCATaGGTGGCCTTTGAAAGATCCTTCCCATTGACCTGG +
Preference number: 6 (lower is better)
Translates to: SLALRKASTASS*VAFERSFPLTW
Trigger: CCAGGTCAATGGGAAGGATCTTTCAAAGGCCACTCATGAAGAGGCAGTGGAAGCTTTTCGCAATGCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539469.6
CDS GCA 72 bp TTCCAGCCAGCCTTCATCCAGCTGAATCTCTGGCCTTaGAACAAGCAGCACGATTCTCTTACACTCATCGTT +
Preference number: 6 (lower is better)
Translates to: FQPAFIQLNLWP*NKQHDSLTLIV
Trigger: AACGATGAGTGTAAGAGAATCGTGCTGCTTGTTGCAAGGCCAGAGATTCAGCTGGATGAAGGCTGGCTGGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 72 bp CTCTTTACTGCTCTGTCCGGAAGAGGACTGGGTGGCTaGCATTGTGCTTCTCAGGTTTTTCTTATTGGTGAG +
Preference number: 6 (lower is better)
Translates to: LFTALSGRGLGG*HCASQVFLIGE
Trigger: CTCACCAATAAGAAAAACCTGAGAAGCACAATGGCAGCCACCCAGTCCTCTTCCGGACAGAGCAGTAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 72 bp AGCTGGAAGCGTAAGCCAGAGTGGTGTGTAGCAGCATaGTCTTCTTCGCTTTCCCTAAGTATCTTGCACTCA +
Preference number: 6 (lower is better)
Translates to: SWKRKPEWCVAA*SSSLSLSILHS
Trigger: TGAGTGCAAGATACTTAGGGAAAGCGAAGAAGAGCATGCTGCTACACACCACTCTGGCTTACGCTTCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539469.6
ENST00000649474.1
CDS CAA 72 bp GCCATTGTGCTTCTCAGGTTTTTCTTATTGGTGAGGTaGATCACCCTTGGAAGGGAACTGTCAGGGGAACGG +
Preference number: 6 (lower is better)
Translates to: AIVLLRFFLLVR*ITLGRELSGER
Trigger: CCGTTCCCCTGACAGTTCCCTTCCAAGGGTGATCAACCTCACCAATAAGAAAAACCTGAGAAGCACAATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 72 bp TCCTTGCTTTCAGCGCTACAACCTTGCTCAGTGGTTTaGGCTTTGGTGGAGGTCGACTCTTTACTGCTCTGT +
Preference number: 6 (lower is better)
Translates to: SLLSALQPCSVV*ALVEVDSLLLC
Trigger: ACAGAGCAGTAAAGAGTCGACCTCCACCAAAGCCAAAACCACTGAGCAAGGTTGTAGCGCTGAAAGCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 90 bp GAGTGGTGTGTAGCAGCATGCTCTTCTTCGCTTTCCCTAAGTATCTaGCACTCACGGATACACACACAGAGTTTCCAGTCAGTTCATGGC +
Preference number: 6 (lower is better)
Translates to: EWCVAACSSSLSLSI*HSRIHTQSFQSVHG
Trigger: GCCATGAACTGACTGGAAACTCTGTGTGTGTATCCGTGAGTGCAAGATACTTAGGGAAAGCGAAGAAGAGCATGCTGCTACACACCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539469.6
ENST00000649474.1
CDS TCA 72 bp TCCTTGGCATTGCGAAAAGCTTCCACTGCCTCTTCATaGGTGGCCTTTGAAAGATCCTTCCCATTGACAGTG +
Preference number: 6 (lower is better)
Translates to: SLALRKASTASS*VAFERSFPLTV
Trigger: CACTGTCAATGGGAAGGATCTTTCAAAGGCCACTCATGAAGAGGCAGTGGAAGCTTTTCGCAATGCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298919.7
CDS TCA 72 bp GAAAGATCCTTCCCATTGACCTCCATGATTTTGTCATaGATCTCCAGGCCATCTGCTCTGTCAGCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: ERSFPLTSMILS*ISRPSALSAGP
Trigger: TGGACCTGCTGACAGAGCAGATGGCCTGGAGATTCATGACAAAATCATGGAGGTCAATGGGAAGGATCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS TCA 72 bp GCGAAAAGCTTCCACTGCCTCTTCATGAGTGGCCTTTaGAAGATCCTTCCCATTGACCACTCATTCACAAGG +
Preference number: 6 (lower is better)
Translates to: AKSFHCLFMSGL*KILPIDHSFTR
Trigger: CCTTGTGAATGAGTGGTCAATGGGAAGGATCTTTCAAAGGCCACTCATGAAGAGGCAGTGGAAGCTTTTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649474.1
CDS TCA 72 bp TCCTTGGCATTGCGAAAAGCTTCCACTGCCTCTTCATaGGTGGCCTTTGAAAGATCCTTCCCATTGACCACT +
Preference number: 6 (lower is better)
Translates to: SLALRKASTASS*VAFERSFPLTT
Trigger: AGTGGTCAATGGGAAGGATCTTTCAAAGGCCACTCATGAAGAGGCAGTGGAAGCTTTTCGCAATGCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649474.1
CDS GCA 72 bp AAAGATGTGCTATTGGGGTCCTCGGCTGCATTCTCCTaGTCTGAGCTCTCATCATTTCGCAAGCTTTCATCT +
Preference number: 6 (lower is better)
Translates to: KDVLLGSSAAFS*SELSSFRKLSS
Trigger: AGATGAAAGCTTGCGAAATGATGAGAGCTCAGAGCAGGAGAATGCAGCCGAGGACCCCAATAGCACATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CCA 72 bp TCTCAGGTTTTTCTTATTGGTGAGGTTGATCACCCTTaGAAGGGAACTGTCAGGGGAACGGTCTACAGTGAG +
Preference number: 6 (lower is better)
Translates to: SQVFLIGEVDHP*KGTVRGTVYSE
Trigger: CTCACTGTAGACCGTTCCCCTGACAGTTCCCTTCCAAGGGTGATCAACCTCACCAATAAGAAAAACCTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 72 bp CTCATTGTACTGAAGTTCAACACTTCCCAGAGTGTCTaGGCTCTGCCCCAGGTCTCTCTTGCTCTTCAAAGA +
Preference number: 6 (lower is better)
Translates to: LIVLKFNTSQSV*ALPQVSLALQR
Trigger: TCTTTGAAGAGCAAGAGAGACCTGGGGCAGAGCCAAGACACTCTGGGAAGTGTTGAACTTCAGTACAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 90 bp TACGAGGCTCTCATTGTACTGAAGTTCAACACTTCCCAGAGTGTCTaGGCTCTGCCCCAGGTCTCTCTTGCTCTTCAAAGATGTGCTATT +
Preference number: 6 (lower is better)
Translates to: YEALIVLKFNTSQSV*ALPQVSLALQRCAI
Trigger: AATAGCACATCTTTGAAGAGCAAGAGAGACCTGGGGCAGAGCCAAGACACTCTGGGAAGTGTTGAACTTCAGTACAATGAGAGCCTCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS TCA 72 bp GCTCCTAATTTTCACCTTCCATTCCATCTTGGGCTCTaGACACTTCTGAGACTCCTTGCACATGCTCACCAA +
Preference number: 6 (lower is better)
Translates to: APNFHLPFHLGL*TLLRLLAHAHQ
Trigger: TTGGTGAGCATGTGCAAGGAGTCTCAGAAGTGTTCAGAGCCCAAGATGGAATGGAAGGTGAAAATTAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS TCA 72 bp GCGAAAAGCTTCCACTGCCTCTTCATGAGTGGCCTTTaGAAGATCCTTCCCATTGACCTCCATGATTTTGTC +
Preference number: 6 (lower is better)
Translates to: AKSFHCLFMSGL*KILPIDLHDFV
Trigger: GACAAAATCATGGAGGTCAATGGGAAGGATCTTTCAAAGGCCACTCATGAAGAGGCAGTGGAAGCTTTTCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402685.7
CDS GCA 72 bp TTTTGGCTGCTCCACCTCATTGGCAGTGGGCTGCATTaGTTCATTATGCTCTTCTTCCAACATCTCCAAGTT +
Preference number: 6 (lower is better)
Translates to: FWLLHLIGSGLH*FIMLFFQHLQV
Trigger: AACTTGGAGATGTTGGAAGAAGAGCATAATGAAGCAATGCAGCCCACTGCCAATGAGGTGGAGCAGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 72 bp GTAGCTCATGCTCCACTCCCTCTTGCTCCCCTTGATTaGATTCAATTGTGCTGCTTGAGTAATACAGGTCAT +
Preference number: 6 (lower is better)
Translates to: VAHAPLPLAPLD*IQLCCLSNTGH
Trigger: ATGACCTGTATTACTCAAGCAGCACAATTGAATGCAATCAAGGGGAGCAAGAGGGAGTGGAGCATGAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 72 bp ACCGAAACTGGTAGCATCCTCCTAAAATCAGTCGCATaGATTCCATTCATTCGGTCATACAGTGGTCACCGA +
Preference number: 6 (lower is better)
Translates to: TETGSILLKSVA*IPFIRSYSGHR
Trigger: TCGGTGACCACTGTATGACCGAATGAATGGAATGCATGCGACTGATTTTAGGAGGATGCTACCAGTTTCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 72 bp TTTTTGGCTGCTCCACCTCATTGGCAGTGGGCTGCATaGCTTCATTATGCTCTTCTTCCAACATCTCCAAGT +
Preference number: 6 (lower is better)
Translates to: FLAAPPHWQWAA*LHYALLPTSPS
Trigger: ACTTGGAGATGTTGGAAGAAGAGCATAATGAAGCAATGCAGCCCACTGCCAATGAGGTGGAGCAGCCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 72 bp TGTAGCTTTGATAATGCCGGGCGTGTGCTGGGATGTTaGCATATCTATATGAGGAGCTGTGGTAAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: CSFDNAGRVLGC*HIYMRSCGKER
Trigger: TCTCTCCTTACCACAGCTCCTCATATAGATATGCAAACATCCCAGCACACGCCCGGCATTATCAAAGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 72 bp GTAGCAGCATGCTCTTCTTCGCTTTCCCTAAGTATCTaGCACTCACGGATACACACACAGAGTTTCCAGTCA +
Preference number: 6 (lower is better)
Translates to: VAACSSSLSLSI*HSRIHTQSFQS
Trigger: TGACTGGAAACTCTGTGTGTGTATCCGTGAGTGCAAGATACTTAGGGAAAGCGAAGAAGAGCATGCTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539469.6
ENST00000649474.1
CDS TCA 72 bp TCAATGTATTCACCAGATACGAGGCTCTCATTGTACTaGAGTTCAACACTTCCCAGAGTGTCTTGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: SMYSPDTRLSLY*SSTLPRVSWLC
Trigger: GCAGAGCCAAGACACTCTGGGAAGTGTTGAACTTCAGTACAATGAGAGCCTCGTATCTGGTGAATACATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS TCA 72 bp TCTTTCACAGTCCTCATCTGGGTTGCCAATGCAGTCTaGGTCAATGTATTCACCAGATACGAGGCTCTCATT +
Preference number: 6 (lower is better)
Translates to: SFTVLIWVANAV*VNVFTRYEALI
Trigger: AATGAGAGCCTCGTATCTGGTGAATACATTGACTCAGACTGCATTGGCAACCCAGATGAGGACTGTGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 72 bp AAGAGCTGCCTGAATCTTTCACAGTCCTCATCTGGGTaGCCAATGCAGTCTGAGTCAATGTATTCACCAGAT +
Preference number: 6 (lower is better)
Translates to: KSCLNLSQSSSG*PMQSESMYSPD
Trigger: ATCTGGTGAATACATTGACTCAGACTGCATTGGCAACCCAGATGAGGACTGTGAAAGATTCAGGCAGCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 90 bp GCTCCACTCCCTCTTGCTCCCCTTGATTGCATTCAATTGTGCTGCTaGAGTAATACAGGTCATACTCTCCATGATTTCGAATCTTGCATT +
Preference number: 6 (lower is better)
Translates to: APLPLAPLDCIQLCC*SNTGHTLHDFESCI
Trigger: AATGCAAGATTCGAAATCATGGAGAGTATGACCTGTATTACTCAAGCAGCACAATTGAATGCAATCAAGGGGAGCAAGAGGGAGTGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS GCA 72 bp CTCGACCTCCTCATATTCAAAGTCTTCTGTTCTGTCTaGATCAGCAGGCAAGCTGGAAATATACTCATTGTC +
Preference number: 6 (lower is better)
Translates to: LDLLIFKVFCSV*ISRQAGNILIV
Trigger: GACAATGAGTATATTTCCAGCTTGCCTGCTGATGCAGACAGAACAGAAGACTTTGAATATGAGGAGGTCGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1
CDS CAA 72 bp AAGGCAAGTGAACTGAAAGGGAATCACCCTCCAGACTaGACTACTGTTTTTCATCAGTCACTTCAGTCCAGA +
Preference number: 6 (lower is better)
Translates to: KASELKGNHPPD*TTVFHQSLQSR
Trigger: TCTGGACTGAAGTGACTGATGAAAAACAGTAGTCAAGTCTGGAGGGTGATTCCCTTTCAGTTCACTTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298919.7
ENST00000539469.6
ENST00000649474.1
CDS CAA 72 bp AGCAGAACTAAGATCCCACACATACTCTCCATCAGGTaGGGAACACTGGCAATTTCTCAATTTCATGCAGAA +
Preference number: 6 (lower is better)
Translates to: SRTKIPHILSIR*GTLAISQFHAE
Trigger: TTCTGCATGAAATTGAGAAATTGCCAGTGTTCCCAACCTGATGGAGAGTATGTGTGGGATCTTAGTTCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298919.7
ENST00000649474.1
CDS TCA 72 bp CTCTTGCTCCCCTTGATTGCATTCAATTGTGCTGCTTaGGTAATACAGGTCATACTCTCCATGATTTCGAAT +
Preference number: 6 (lower is better)
Translates to: LLLPLIAFNCAA*VIQVILSMISN
Trigger: ATTCGAAATCATGGAGAGTATGACCTGTATTACTCAAGCAGCACAATTGAATGCAATCAAGGGGAGCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298919.7
ENST00000402685.7
ENST00000539469.6
ENST00000548316.1
ENST00000649474.1