Pregenerated sensors for PDX1 (Homo sapiens)
Ensembl gene IDs: ENSG00000139515Ensembl transcript IDs: ENST00000381033.5
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGACTCTTGCACTGCTCCTAAGCCAGCCCTGCCGCTGCTCGCCCTaGCTTGCAAGATGTTCTCTTCCTCAGAAGAAAGGGGTGCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: GTLALLLSQPCRCSP*LARCSLPQKKGVQV Trigger: AACTTGCACCCCTTTCTTCTGAGGAAGAGAACATCTTGCAAGGCAGGGCGAGCAGCGGCAGGGCTGGCTTAGGAGCAGTGCAAGAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR GCA 90 bp | TGGCTCGTGAATAGTTGTTGGTTTCCAAGGCGCACCAGGCCACTGTaGTTGTCTTCAGCACAGCCTCTACCTCGGAACAGGAATTACGTC | + |
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Preference number: 1 (lower is better) Translates to: WLVNSCWFPRRTRPL*LSSAQPLPRNRNYV Trigger: GACGTAATTCCTGTTCCGAGGTAGAGGCTGTGCTGAAGACAAGCACAGTGGCCTGGTGCGCCTTGGAAACCAACAACTATTCACGAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR TCA 90 bp | TGTGCAGTAGTGAAGTGTGCAGCTAGAGAAGAGGAAGAGGAGGGATaGGAAGGGGAGGTAGAAGGAGGAGGAGGAGAAAGAAAGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: CAVVKCAAREEEEEG*EGEVEGGGGERKRS Trigger: TGACCTCTTTCTTTCTCCTCCTCCTCCTTCTACCTCCCCTTCTCATCCCTCCTCTTCCTCTTCTCTAGCTGCACACTTCACTACTGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR CCA 90 bp | ATTATTTCTAAACTTAAAGGGGTCGCCCGAGTAAGAATGGCTTTATaGCAGATTAAGGTACTCGGCCCAGCTTCCCCGCTGTGTGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: IISKLKGVARVRMAL*QIKVLGPASPLCVL Trigger: TAACACACACAGCGGGGAAGCTGGGCCGAGTACCTTAATCTGCCATAAAGCCATTCTTACTCGGGCGACCCCTTTAAGTTTAGAAATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR-3UTR CCA 90 bp | TTTCTTCCGGAAGGCCTGCCGGCATCTACCCGCGGGGCCCCAACTGGCACATGCCCCTTCGGTCTAAGGTaGGCCCCGCAATTGCCGCCC | + |
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Preference number: 2 (lower is better) Translates to: FLPEGLPASTRGAPTGTCPFGLR*APQLPP Trigger: GGGCGGCAATTGCGGGGCCCACCTTAGACCGAAGGG...GCATGTGCCAGTTGGGGCCCCGCGGGTAGATGCCGGCAGGCCTTCCGGAAGAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGTTTCCAAGGCGCACCAGGCCACTGTGCTTGTCTTCAGCACAGCCTCTACCGCGGGGCCCCAACTaGCACATGCGCCTGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: CWFPRRTRPLCLSSAQPLPRGPN*HMRLRE Trigger: CTCTCTCAGGCGCATGTGCCAGTTGGGGCCCCGCGG...TAGAGGCTGTGCTGAAGACAAGCACAGTGGCCTGGTGCGCCTTGGAAACCAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR-3UTR GCA 90 bp | GCCACTGTGCTTGTCTTCAGCACAGCCTCTACCTCGGAACAGGAATTACGTCCACTCCTAAGCCAGCCCTaGCGCTGCTCGCCCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: ATVLVFSTASTSEQELRPLLSQP*RCSPCL Trigger: AAGGCAGGGCGAGCAGCGGCAGGGCTGGCTTAGGAG...TGGACGTAATTCCTGTTCCGAGGTAGAGGCTGTGCTGAAGACAAGCACAGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR-3UTR GCA 90 bp | GATGTGCGCAACAGCCACAAACAACGCCAATCCAGTATCACTAAAAGAGGGCCCTTCTTCCGGAAGGCCTaGCGGCATCTACCCGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: DVRNSHKQRQSSITKRGPFFRKA*RHLPAG Trigger: CCCCGCGGGTAGATGCCGGCAGGCCTTCCGGAAGAA...GGGCCCTCTTTTAGTGATACTGGATTGGCGTTGTTTGTGGCTGTTGCGCACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR-3UTR CCA 90 bp | GCATTTCCCACAAACATAACCCGAGCACAAGGCCCAGACCTTGAAAAGAAGACAAACTGCCAGGGCGGGTaGTCCACGCCCGGGGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: AFPTNITRAQGPDLEKKTNCQGG*STPGVL Trigger: GAGGACCCCGGGCGTGGACCACCCGCCCTGGCAGTT...TGTCTTCTTTTCAAGGTCTGGGCCTTGTGCTCGGGTTATGTTTGTGGGAAATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR-3UTR TCA 90 bp | GCATTTCCCACAAACATAACCCGAGCACAAGGCCCAGACCTTGAAAAGAAGACATCCTCGGCGAGTGGTTaGAGCCCCTCAGCCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: AFPTNITRAQGPDLEKKTSSASG*SPSARS Trigger: GCTCCTGGCTGAGGGGCTTCAACCACTCGCCGAGGA...TGTCTTCTTTTCAAGGTCTGGGCCTTGTGCTCGGGTTATGTTTGTGGGAAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR CAA 90 bp | CTCGTGAATAGTTGTTGGTTTCCAAGGCGCACCAGGCCACTGTGCTaGTCTTCAGCACAGCCTCTACCTCGGAACAGGAATTACGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LVNSCWFPRRTRPLC*SSAQPLPRNRNYVH Trigger: GTGGACGTAATTCCTGTTCCGAGGTAGAGGCTGTGCTGAAGACAAGCACAGTGGCCTGGTGCGCCTTGGAAACCAACAACTATTCACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR-3UTR TCA 90 bp | AAAGGGGTGCAAGTTATAAGATGTGCAGTAGTGAAGTGTGCAGCTAGAGAAGAGACTGGCACATGCGCCTaGGAGAGCGGGTTTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: KGVQVIRCAVVKCAAREETGTCA*ESGFSP Trigger: AGGGGAAAACCCGCTCTCTCAGGCGCATGTGCCAGT...CTCTTCTCTAGCTGCACACTTCACTACTGCACATCTTATAACTTGCACCCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR-3UTR GCA 90 bp | GCCACTGTGCTTGTCTTCAGCACAGCCTCTACCTCGGAACAGGAATTACGTCCAGCAAGTTATAAGATGTaGAGTAGTGAAGTGTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ATVLVFSTASTSEQELRPASYKM*SSEVCS Trigger: GCTGCACACTTCACTACTGCACATCTTATAACTTGC...TGGACGTAATTCCTGTTCCGAGGTAGAGGCTGTGCTGAAGACAAGCACAGTGGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGAAAGGTTTGAAACAAAGTGAGGAGAATCAGTTTTCATCTCTTCCCATACCCCCTTGCCTTCCCTaGCAGCAGTGTGGAACTGGA | + |
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Preference number: 2 (lower is better) Translates to: CQKGLKQSEENQFSSLPIPPCLP*QQCGTG Trigger: TCCAGTTCCACACTGCTGGCAGGGAAGGCAAGGGGG...TATGGGAAGAGATGAAAACTGATTCTCCTCACTTTGTTTCAAACCTTTCTGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR-3UTR GCA 90 bp | GGTTTGAAACAAAGTGAGGAGAATCAGTTTTCATCTCTTCCCATATTATCAGTAGGTGGGCCCCGCAATTaGCGCCCCATTCAACTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GLKQSEENQFSSLPILSVGGPRN*RPIQLP Trigger: TGGCAGTTGAATGGGGCGGCAATTGCGGGGCCCACC...TACTGATAATATGGGAAGAGATGAAAACTGATTCTCCTCACTTTGTTTCAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR CCA 72 bp | CCCGCAATTGCCGCCCCATTCAACTGCCAGGGCGGGTaGTCCACGCCCGGGGTCCTCCTAGGCCCTCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: PAIAAPFNCQGG*STPGVLLGPLL Trigger: GAGCAGAGGGCCTAGGAGGACCCCGGGCGTGGACCACCCGCCCTGGCAGTTGAATGGGGCGGCAATTGCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR CCA 72 bp | GGGGTCCTCCTAGGCCCTCTGCTCCTCCTCGGCGAGTaGTTGAAGCCCCTCAGCCAGGAGCAGCTCCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: GVLLGPLLLLGE*LKPLSQEQLLP Trigger: AGGCAGGAGCTGCTCCTGGCTGAGGGGCTTCAACCACTCGCCGAGGAGGAGCAGAGGGCCTAGGAGGACCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR GCA 72 bp | CCTGCCAGCAGTGTGGAACTGGAGCACAGGGACTCTTaGACTGCTCCTAAGCCAGCCCTGCCGCTGCTCGCC | + |
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Preference number: 3 (lower is better) Translates to: PASSVELEHRDS*TAPKPALPLLA Trigger: GGCGAGCAGCGGCAGGGCTGGCTTAGGAGCAGTGCAAGAGTCCCTGTGCTCCAGTTCCACACTGCTGGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR GCA 72 bp | GCACTGCTCCTAAGCCAGCCCTGCCGCTGCTCGCCCTaGCTTGCAAGATGTTCTCTTCCTCAGAAGAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: ALLLSQPCRCSP*LARCSLPQKKG Trigger: CCCTTTCTTCTGAGGAAGAGAACATCTTGCAAGGCAGGGCGAGCAGCGGCAGGGCTGGCTTAGGAGCAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR GCA 72 bp | AGCACAGGGACTCTTGCACTGCTCCTAAGCCAGCCCTaGCGCTGCTCGCCCTGCCTTGCAAGATGTTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: STGTLALLLSQP*RCSPCLARCSL Trigger: AAGAGAACATCTTGCAAGGCAGGGCGAGCAGCGGCAGGGCTGGCTTAGGAGCAGTGCAAGAGTCCCTGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR GCA 72 bp | GGTCCCAAGGTGGAGTGCTGTAGGAGGGCAGGGATGTaGGCAACAGCCACAAACAACGCCAATCCAGTATCA | + |
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Preference number: 3 (lower is better) Translates to: GPKVECCRRAGM*ATATNNANPVS Trigger: TGATACTGGATTGGCGTTGTTTGTGGCTGTTGCGCACATCCCTGCCCTCCTACAGCACTCCACCTTGGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR-3UTR CAA 90 bp | GCCACTGTGCTTGTCTTCAGCACAGCCTCTACCTCGGAACAGGAATTACGTCCAGCTGCTCGCCCTGCCTaGCAAGATGTTCTCTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: ATVLVFSTASTSEQELRPAARPA*QDVLFL Trigger: GAGGAAGAGAACATCTTGCAAGGCAGGGCGAGCAGC...TGGACGTAATTCCTGTTCCGAGGTAGAGGCTGTGCTGAAGACAAGCACAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR GCA 72 bp | AATAGTTGTTGGTTTCCAAGGCGCACCAGGCCACTGTaGTTGTCTTCAGCACAGCCTCTACCTCGGAACAGG | + |
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Preference number: 3 (lower is better) Translates to: NSCWFPRRTRPL*LSSAQPLPRNR Trigger: CCTGTTCCGAGGTAGAGGCTGTGCTGAAGACAAGCACAGTGGCCTGGTGCGCCTTGGAAACCAACAACTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR CCA 72 bp | AAACTTAAAGGGGTCGCCCGAGTAAGAATGGCTTTATaGCAGATTAAGGTACTCGGCCCAGCTTCCCCGCTG | + |
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Preference number: 3 (lower is better) Translates to: KLKGVARVRMAL*QIKVLGPASPL Trigger: CAGCGGGGAAGCTGGGCCGAGTACCTTAATCTGCCATAAAGCCATTCTTACTCGGGCGACCCCTTTAAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTCTTCCTCAGAAGAAAGGGGTGCAAGTTATAAGATGTGCAGTAGTGAAGAGGTGGGCCCCGCAATaGCCGCCCCATTCAACTGCC | + |
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Preference number: 3 (lower is better) Translates to: CSLPQKKGVQVIRCAVVKRWAPQ*PPHSTA Trigger: GGCAGTTGAATGGGGCGGCAATTGCGGGGCCCACCT...CTTCACTACTGCACATCTTATAACTTGCACCCCTTTCTTCTGAGGAAGAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR TCA 72 bp | GCCTTCCAATGTGTATGGTACAGTTTCCATTGTCTTTaGAGAGCCGGCTTCTCTAAACAGGTCCCAAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: AFQCVWYSFHCL*RAGFSKQVPRW Trigger: CCACCTTGGGACCTGTTTAGAGAAGCCGGCTCTTCAAAGACAATGGAAACTGTACCATACACATTGGAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR TCA 72 bp | AAAGTGAATTCGAATCATCCCACTGCCAGAAAGGTTTaGAACAAAGTGAGGAGAATCAGTTTTCATCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: KVNSNHPTARKV*NKVRRISFHLF Trigger: GAAGAGATGAAAACTGATTCTCCTCACTTTGTTTCAAACCTTTCTGGCAGTGGGATGATTCGAATTCACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | CTCCTAGGCCCTCTGCTCCTCCTCGGCGAGTGGTTGAAGCCCCTCAGCCAGGAGCGCGCGTGTAGGCCGTaGGCGTCCGCTTGTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LLGPLLLLGEWLKPLSQERACRP*ASACSP Trigger: AGGAGAACAAGCGGACGCGCACGGCCTACACGCGCG...CTCCTGGCTGAGGGGCTTCAACCACTCGCCGAGGAGGAGCAGAGGGCCTAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | CAACTGGCACATGCGCCTGAGAGAGCGGGTTTTCCCCTTCGGTCTAAGGTGGGCCCGCGGGGCCCCAACTaGCACATGCGCCTGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: QLAHAPERAGFPLRSKVGPRGPN*HMRLRE Trigger: CTCTCTCAGGCGCATGTGCCAGTTGGGGCCCCGCGG...GCCCACCTTAGACCGAAGGGGAAAACCCGCTCTCTCAGGCGCATGTGCCAGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | ACAGGTCCCAAGGTGGAGTGCTGTAGGAGGGCAGGGATGTGCGCAACAGCCACACTCCTAAGCCAGCCCTaGCGCTGCTCGCCCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TGPKVECCRRAGMCATATLLSQP*RCSPCL Trigger: AAGGCAGGGCGAGCAGCGGCAGGGCTGGCTTAGGAG...TGTGGCTGTTGCGCACATCCCTGCCCTCCTACAGCACTCCACCTTGGGACCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | ACAGGTCCCAAGGTGGAGTGCTGTAGGAGGGCAGGGATGTGCGCAACAGCCACACCGGGAGTCGGGAGCTaGAGCCGGGGATTTGGCACT | + |
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Preference number: 4 (lower is better) Translates to: TGPKVECCRRAGMCATATPGVGS*SRGFGT Trigger: AGTGCCAAATCCCCGGCTCCAGCTCCCGACTCCCGG...TGTGGCTGTTGCGCACATCCCTGCCCTCCTACAGCACTCCACCTTGGGACCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | ACTGCTCCTAAGCCAGCCCTGCCGCTGCTCGCCCTGCCTTGCAAGATGTTCTCTTCCTGCCTCTCATCGTaGTTCCTGCGGCCGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: TAPKPALPLLALPCKMFSSCLSS*FLRPPR Trigger: CCTCGGCGGCCGCAGGAACCACGATGAGAGGCAGGA...AGAGAACATCTTGCAAGGCAGGGCGAGCAGCGGCAGGGCTGGCTTAGGAGCAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | ACAGGTCCCAAGGTGGAGTGCTGTAGGAGGGCAGGGATGTGCGCAACAGCCACACCCTTCGGTCTAAGGTaGGCCCCGCAATTGCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: TGPKVECCRRAGMCATATPFGLR*APQLPP Trigger: GGGCGGCAATTGCGGGGCCCACCTTAGACCGAAGGG...TGTGGCTGTTGCGCACATCCCTGCCCTCCTACAGCACTCCACCTTGGGACCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | TGTTGGTTTCCAAGGCGCACCAGGCCACTGTGCTTGTCTTCAGCACAGCCTCTAGGCGCCGGGCCTCGCTaGAACGCGCATGGGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: CWFPRRTRPLCLSSAQPLGAGPR*NAHGSL Trigger: CAAGGACCCATGCGCGTTCCAGCGAGGCCCGGCGCC...TAGAGGCTGTGCTGAAGACAAGCACAGTGGCCTGGTGCGCCTTGGAAACCAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | TGTTGGTTTCCAAGGCGCACCAGGCCACTGTGCTTGTCTTCAGCACAGCCTCTAGACGCTGGAGGGCTGTaGCGACGCGCTAAGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: CWFPRRTRPLCLSSAQPLDAGGL*RRAKAR Trigger: CCTGGCCTTAGCGCGTCGCCACAGCCCTCCAGCGTC...TAGAGGCTGTGCTGAAGACAAGCACAGTGGCCTGGTGCGCCTTGGAAACCAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR TCA 90 bp | CCAAGGTGGAGTGCTGTAGGAGGGCAGGGATGTGCGCAACAGCCACAAACAACGCACCCCTGCTCGCTTTaGCAGCTCCGCACTGATCTC | + |
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Preference number: 4 (lower is better) Translates to: PRWSAVGGQGCAQQPQTTHPCSL*QLRTDL Trigger: GAGATCAGTGCGGAGCTGTCAAAGCGAGCAGGGGTG...CGTTGTTTGTGGCTGTTGCGCACATCCCTGCCCTCCTACAGCACTCCACCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR TCA 90 bp | TGTTGGTTTCCAAGGCGCACCAGGCCACTGTGCTTGTCTTCAGCACAGCCTCTATCCTCGGCGAGTGGTTaGAGCCCCTCAGCCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: CWFPRRTRPLCLSSAQPLSSASG*SPSARS Trigger: GCTCCTGGCTGAGGGGCTTCAACCACTCGCCGAGGA...TAGAGGCTGTGCTGAAGACAAGCACAGTGGCCTGGTGCGCCTTGGAAACCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | AGGAGGGCAGGGATGTGCGCAACAGCCACAAACAACGCCAATCCAGTATCACTATCTCATCGTGGTTCCTaGGGCCGCCGAGGCGCGACG | + |
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Preference number: 4 (lower is better) Translates to: RRAGMCATATNNANPVSLSHRGS*GRRGAT Trigger: CGTCGCGCCTCGGCGGCCGCAGGAACCACGATGAGA...TAGTGATACTGGATTGGCGTTGTTTGTGGCTGTTGCGCACATCCCTGCCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | TGTTGGTTTCCAAGGCGCACCAGGCCACTGTGCTTGTCTTCAGCACAGCCTCTATTCTTCCGGAAGGCCTaGCGGCATCTACCCGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: CWFPRRTRPLCLSSAQPLFFRKA*RHLPAG Trigger: CCCCGCGGGTAGATGCCGGCAGGCCTTCCGGAAGAA...TAGAGGCTGTGCTGAAGACAAGCACAGTGGCCTGGTGCGCCTTGGAAACCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | TTTCTTCCGGAAGGCCTGCCGGCATCTACCCGCGGGGCCCCAACTGGCACATGCCTCGTGAATAGTTGTTaGTTTCCAAGGCGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: FLPEGLPASTRGAPTGTCLVNSC*FPRRTR Trigger: CCTGGTGCGCCTTGGAAACCAACAACTATTCACGAG...GCATGTGCCAGTTGGGGCCCCGCGGGTAGATGCCGGCAGGCCTTCCGGAAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | CCCAATACTACAAAAACCAATGGCTCTTTTTCTTCCGGAAGGCCTGCCGGCATCGTCACGGCGCAGTCCTaGTCAGGCTCCGCGACCCCG | + |
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Preference number: 4 (lower is better) Translates to: PNTTKTNGSFSSGRPAGIVTAQS*SGSATP Trigger: CGGGGTCGCGGAGCCTGAGCAGGACTGCGCCGTGAC...GATGCCGGCAGGCCTTCCGGAAGAAAAAGAGCCATTGGTTTTTGTAGTATTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | CCAAGGTGGAGTGCTGTAGGAGGGCAGGGATGTGCGCAACAGCCACAAACAACGTCGCTGGAACGCGCATaGGTCCTTGTAAAGCTGCGT | + |
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Preference number: 4 (lower is better) Translates to: PRWSAVGGQGCAQQPQTTSLERA*VLVKLR Trigger: ACGCAGCTTTACAAGGACCCATGCGCGTTCCAGCGA...CGTTGTTTGTGGCTGTTGCGCACATCCCTGCCCTCCTACAGCACTCCACCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | CCCTTCGGTCTAAGGTGGGCCCCGCAATTGCCGCCCCATTCAACTGCCAGGGCGCTCACTGTATTCCACTaGCATCAATTTCACGGGATC | + |
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Preference number: 4 (lower is better) Translates to: PFGLRWAPQLPPHSTARALTVFH*HQFHGI Trigger: GATCCCGTGAAATTGATGCCAGTGGAATACAGTGAG...CGCCCTGGCAGTTGAATGGGGCGGCAATTGCGGGGCCCACCTTAGACCGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR TCA 90 bp | AGGAGGGCAGGGATGTGCGCAACAGCCACAAACAACGCCAATCCAGTATCACTACGGTCAAGTTCAACATaGCAGCCAGCTCCACCCGGC | + |
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Preference number: 4 (lower is better) Translates to: RRAGMCATATNNANPVSLRSSST*QPAPPG Trigger: GCCGGGTGGAGCTGGCTGTCATGTTGAACTTGACCG...TAGTGATACTGGATTGGCGTTGTTTGTGGCTGTTGCGCACATCCCTGCCCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR TCA 90 bp | GCCACTGTGCTTGTCTTCAGCACAGCCTCTACCTCGGAACAGGAATTACGTCCAACTGGCACATGCGCCTaGGAGAGCGGGTTTTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: ATVLVFSTASTSEQELRPTGTCA*ESGFSP Trigger: AGGGGAAAACCCGCTCTCTCAGGCGCATGTGCCAGT...TGGACGTAATTCCTGTTCCGAGGTAGAGGCTGTGCTGAAGACAAGCACAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | GATGTGCGCAACAGCCACAAACAACGCCAATCCAGTATCACTAAAAGAGGGCCCCATGGGAAAGGCAGCTaGACGCGGTTGGGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: DVRNSHKQRQSSITKRGPHGKGS*TRLGSS Trigger: GGAGGAGCCCAACCGCGTCCAGCTGCCTTTCCCATG...GGGCCCTCTTTTAGTGATACTGGATTGGCGTTGTTTGTGGCTGTTGCGCACATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR TCA 90 bp | CCTCGGAACAGGAATTACGTCCACATCCTAAATAGAAAGTTCCGAATATCTTTGGCCGGGAGGTGGTGGTaGAGGTGCGCCACCGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: PRNRNYVHILNRKFRISLAGRWW*RCATAG Trigger: CCCCGCGGTGGCGCACCTTCACCACCACCTCCCGGC...CAAAGATATTCGGAACTTTCTATTTAGGATGTGGACGTAATTCCTGTTCCGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | AGGAGGGCAGGGATGTGCGCAACAGCCACAAACAACGCCAATCCAGTATCACTACGCACCAGGCCACTGTaGTTGTCTTCAGCACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: RRAGMCATATNNANPVSLRTRPL*LSSAQP Trigger: AGGCTGTGCTGAAGACAAGCACAGTGGCCTGGTGCG...TAGTGATACTGGATTGGCGTTGTTTGTGGCTGTTGCGCACATCCCTGCCCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | GCTTTATGGCAGATTAAGGTACTCGGCCCAGCTTCCCCGCTGTGTGTGTTAGGGCCTTGTAAAGCTGCGTaGCCGCGTAGTACTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALWQIKVLGPASPLCVLGPCKAA*PRSTAP Trigger: AGGAGCAGTACTACGCGGCCACGCAGCTTTACAAGG...CCCTAACACACACAGCGGGGAAGCTGGGCCGAGTACCTTAATCTGCCATAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR TCA 90 bp | ACTGCTCCTAAGCCAGCCCTGCCGCTGCTCGCCCTGCCTTGCAAGATGTTCTCTGGTCATACTGGCTCGTaGATAGTTGTTGGTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TAPKPALPLLALPCKMFSGHTGS*IVVGFQ Trigger: TTGGAAACCAACAACTATTCACGAGCCAGTATGACC...AGAGAACATCTTGCAAGGCAGGGCGAGCAGCGGCAGGGCTGGCTTAGGAGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | AAAGGGGTGCAAGTTATAAGATGTGCAGTAGTGAAGTGTGCAGCTAGAGAAGAGGCTCCTCGCCGTTCATaGCTGCGGCCCGGGATTGGG | + |
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Preference number: 4 (lower is better) Translates to: KGVQVIRCAVVKCAAREEAPRRS*LRPGIG Trigger: CCCAATCCCGGGCCGCAGCCATGAACGGCGAGGAGC...CTCTTCTCTAGCTGCACACTTCACTACTGCACATCTTATAACTTGCACCCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | TGTGTTAGGGAGCCTTCCAATGTGTATGGTACAGTTTCCATTGTCTTTGAAGAGGCAGCTGGACGCGGTTaGGCTCCTCCAGGACGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CVREPSNVYGTVSIVFEEAAGRG*APPGRP Trigger: CGGGCGTCCTGGAGGAGCCCAACCGCGTCCAGCTGC...CTCTTCAAAGACAATGGAAACTGTACCATACACATTGGAAGGCTCCCTAACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | AGGAGGAGGAGGAAGAGGAGGACTCACTGTATTCCACTGGCATCAATTTCACGGTCCCTGCCAGCAGTGTaGAACTGGAGCACAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RRRRKRRTHCIPLASISRSLPAV*NWSTGT Trigger: AGTCCCTGTGCTCCAGTTCCACACTGCTGGCAGGGA...CCGTGAAATTGATGCCAGTGGAATACAGTGAGTCCTCCTCTTCCTCCTCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR CAA 72 bp | AGTTGTTGGTTTCCAAGGCGCACCAGGCCACTGTGCTaGTCTTCAGCACAGCCTCTACCTCGGAACAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SCWFPRRTRPLC*SSAQPLPRNRN Trigger: ATTCCTGTTCCGAGGTAGAGGCTGTGCTGAAGACAAGCACAGTGGCCTGGTGCGCCTTGGAAACCAACAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR TCA 90 bp | CAACTGGCACATGCGCCTGAGAGAGCGGGTTTTCCCCTTCGGTCTAAGGTGGGCAGTTTCCATTGTCTTTaGAGAGCCGGCTTCTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QLAHAPERAGFPLRSKVGSFHCL*RAGFSK Trigger: TTTAGAGAAGCCGGCTCTTCAAAGACAATGGAAACT...GCCCACCTTAGACCGAAGGGGAAAACCCGCTCTCTCAGGCGCATGTGCCAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | TGTGTTAGGGAGCCTTCCAATGTGTATGGTACAGTTTCCATTGTCTTTGAAGAGCTCGCCGTTCATGGCTaGGGCCCGGGATTGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: CVREPSNVYGTVSIVFEELAVHG*GPGLGT Trigger: GGTGCCCAATCCCGGGCCGCAGCCATGAACGGCGAG...CTCTTCAAAGACAATGGAAACTGTACCATACACATTGGAAGGCTCCCTAACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | AGGAGGAGGAGGAAGAGGAGGACTCACTGTATTCCACTGGCATCAATTTCACGGAGGAGGGCAGGGATGTaGGCAACAGCCACAAACAAC | + |
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Preference number: 4 (lower is better) Translates to: RRRRKRRTHCIPLASISRRRAGM*ATATNN Trigger: GTTGTTTGTGGCTGTTGCGCACATCCCTGCCCTCCT...CCGTGAAATTGATGCCAGTGGAATACAGTGAGTCCTCCTCTTCCTCCTCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR TCA 90 bp | AGGAGGAGGAGGAAGAGGAGGACTCACTGTATTCCACTGGCATCAATTTCACGGTGGCCTTTCCACGCGTaGGCTTTGGTAGACTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: RRRRKRRTHCIPLASISRWPFHA*ALVDFI Trigger: GATGAAGTCTACCAAAGCTCACGCGTGGAAAGGCCA...CCGTGAAATTGATGCCAGTGGAATACAGTGAGTCCTCCTCTTCCTCCTCCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | CCTCGGAACAGGAATTACGTCCACATCCTAAATAGAAAGTTCCGAATATCTTTGGCCGCCCCATTCAACTaGCAGGGCGGGTGGTCCACG | + |
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Preference number: 4 (lower is better) Translates to: PRNRNYVHILNRKFRISLAAPFN*QGGWST Trigger: CGTGGACCACCCGCCCTGGCAGTTGAATGGGGCGGC...CAAAGATATTCGGAACTTTCTATTTAGGATGTGGACGTAATTCCTGTTCCGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | TGTTCTCTTCCTCAGAAGAAAGGGGTGCAAGTTATAAGATGTGCAGTAGTGAAGAGCCAGCCCTGCCGCTaGTCGCCCTGCCTTGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSLPQKKGVQVIRCAVVKSQPCR*SPCLAR Trigger: TCTTGCAAGGCAGGGCGAGCAGCGGCAGGGCTGGCT...CTTCACTACTGCACATCTTATAACTTGCACCCCTTTCTTCTGAGGAAGAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | AAAGGGGTGCAAGTTATAAGATGTGCAGTAGTGAAGTGTGCAGCTAGAGAAGAGGAGCACAGGGACTCTTaGACTGCTCCTAAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGVQVIRCAVVKCAAREEEHRDS*TAPKPA Trigger: GGCTGGCTTAGGAGCAGTGCAAGAGTCCCTGTGCTC...CTCTTCTCTAGCTGCACACTTCACTACTGCACATCTTATAACTTGCACCCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | TGTTCTCTTCCTCAGAAGAAAGGGGTGCAAGTTATAAGATGTGCAGTAGTGAAGCTGGAGCCGGGGATTTaGCACTGTGTGGCGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSLPQKKGVQVIRCAVVKLEPGI*HCVAFP Trigger: TGGGAACGCCACACAGTGCCAAATCCCCGGCTCCAG...CTTCACTACTGCACATCTTATAACTTGCACCCCTTTCTTCTGAGGAAGAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | AGGAGGGCAGGGATGTGCGCAACAGCCACAAACAACGCCAATCCAGTATCACTAAGTTCCGAATATCTTTaGTTTAGTGGTCACCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRAGMCATATNNANPVSLSSEYL*FSGHPG Trigger: CCCTGGGTGACCACTAAACCAAAGATATTCGGAACT...TAGTGATACTGGATTGGCGTTGTTTGTGGCTGTTGCGCACATCCCTGCCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR TCA 90 bp | AGGAGGGCAGGGATGTGCGCAACAGCCACAAACAACGCCAATCCAGTATCACTAACTGCCAGAAAGGTTTaGAACAAAGTGAGGAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: RRAGMCATATNNANPVSLTARKV*NKVRRI Trigger: GATTCTCCTCACTTTGTTTCAAACCTTTCTGGCAGT...TAGTGATACTGGATTGGCGTTGTTTGTGGCTGTTGCGCACATCCCTGCCCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | TGCCAGAAAGGTTTGAAACAAAGTGAGGAGAATCAGTTTTCATCTCTTCCCATAGGTGGGCCCCGCAATTaGCGCCCCATTCAACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CQKGLKQSEENQFSSLPIGGPRN*RPIQLP Trigger: TGGCAGTTGAATGGGGCGGCAATTGCGGGGCCCACC...TATGGGAAGAGATGAAAACTGATTCTCCTCACTTTGTTTCAAACCTTTCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | GCTTTATGGCAGATTAAGGTACTCGGCCCAGCTTCCCCGCTGTGTGTGTTAGGGTTCGAATCATCCCACTaGCAGAAAGGTTTGAAACAA | + |
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Preference number: 4 (lower is better) Translates to: ALWQIKVLGPASPLCVLGFESSH*QKGLKQ Trigger: TTGTTTCAAACCTTTCTGGCAGTGGGATGATTCGAA...CCCTAACACACACAGCGGGGAAGCTGGGCCGAGTACCTTAATCTGCCATAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | TGCCAGAAAGGTTTGAAACAAAGTGAGGAGAATCAGTTTTCATCTCTTCCCATAGGATTTGGCACTGTGTaGCGTTCCCACTCCCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CQKGLKQSEENQFSSLPIGFGTV*RSHSRR Trigger: GCGCCGGGAGTGGGAACGCCACACAGTGCCAAATCC...TATGGGAAGAGATGAAAACTGATTCTCCTCACTTTGTTTCAAACCTTTCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | TGTTGGTTTCCAAGGCGCACCAGGCCACTGTGCTTGTCTTCAGCACAGCCTCTAGCCTTCCAATGTGTATaGTACAGTTTCCATTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CWFPRRTRPLCLSSAQPLAFQCV*YSFHCL Trigger: AAGACAATGGAAACTGTACCATACACATTGGAAGGC...TAGAGGCTGTGCTGAAGACAAGCACAGTGGCCTGGTGCGCCTTGGAAACCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | TGTGTTAGGGAGCCTTCCAATGTGTATGGTACAGTTTCCATTGTCTTTGAAGAGTGCCGCTGCTCGCCCTaGCTTGCAAGATGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CVREPSNVYGTVSIVFEECRCSP*LARCSL Trigger: AAGAGAACATCTTGCAAGGCAGGGCGAGCAGCGGCA...CTCTTCAAAGACAATGGAAACTGTACCATACACATTGGAAGGCTCCCTAACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | GGTTTGAAACAAAGTGAGGAGAATCAGTTTTCATCTCTTCCCATATTATCAGTACTCCTCCTCGGCGAGTaGTTGAAGCCCCTCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKQSEENQFSSLPILSVLLLGE*LKPLSQ Trigger: CTGGCTGAGGGGCTTCAACCACTCGCCGAGGAGGAG...TACTGATAATATGGGAAGAGATGAAAACTGATTCTCCTCACTTTGTTTCAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | CCTCGGAACAGGAATTACGTCCACATCCTAAATAGAAAGTTCCGAATATCTTTGAAACAGGTCCCAAGGTaGAGTGCTGTAGGAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRNRNYVHILNRKFRISLKQVPR*SAVGGQ Trigger: CTGCCCTCCTACAGCACTCCACCTTGGGACCTGTTT...CAAAGATATTCGGAACTTTCTATTTAGGATGTGGACGTAATTCCTGTTCCGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | GGTTTGAAACAAAGTGAGGAGAATCAGTTTTCATCTCTTCCCATATTATCAGTACCCCCTTGCCTTCCCTaGCAGCAGTGTGGAACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLKQSEENQFSSLPILSVPPCLP*QQCGTG Trigger: TCCAGTTCCACACTGCTGGCAGGGAAGGCAAGGGGG...TACTGATAATATGGGAAGAGATGAAAACTGATTCTCCTCACTTTGTTTCAAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR TCA 90 bp | TGCCAGAAAGGTTTGAAACAAAGTGAGGAGAATCAGTTTTCATCTCTTCCCATAACAAGGCCCAGACCTTaGAAAGAAGACAGACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CQKGLKQSEENQFSSLPITRPRP*KEDRPG Trigger: CCCAGGTCTGTCTTCTTTTCAAGGTCTGGGCCTTGT...TATGGGAAGAGATGAAAACTGATTCTCCTCACTTTGTTTCAAACCTTTCTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | AAAGGGGTGCAAGTTATAAGATGTGCAGTAGTGAAGTGTGCAGCTAGAGAAGAGAAGACAGACCTGGGATaGACAGACCTGTTTGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KGVQVIRCAVVKCAAREEKTDLG*TDLFVN Trigger: ATTTACAAACAGGTCTGTGCATCCCAGGTCTGTCTT...CTCTTCTCTAGCTGCACACTTCACTACTGCACATCTTATAACTTGCACCCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR GCA 90 bp | TGTGTTAGGGAGCCTTCCAATGTGTATGGTACAGTTTCCATTGTCTTTGAAGAGGCAAGTTATAAGATGTaGAGTAGTGAAGTGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CVREPSNVYGTVSIVFEEASYKM*SSEVCS Trigger: GCTGCACACTTCACTACTGCACATCTTATAACTTGC...CTCTTCAAAGACAATGGAAACTGTACCATACACATTGGAAGGCTCCCTAACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CCA 90 bp | TGTGTTAGGGAGCCTTCCAATGTGTATGGTACAGTTTCCATTGTCTTTGAAGAGGTAAGAATGGCTTTATaGCAGATTAAGGTACTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CVREPSNVYGTVSIVFEEVRMAL*QIKVLG Trigger: GCCGAGTACCTTAATCTGCCATAAAGCCATTCTTAC...CTCTTCAAAGACAATGGAAACTGTACCATACACATTGGAAGGCTCCCTAACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| 3UTR CAA 72 bp | AAAAGTGAATTCGAATCATCCCACTGCCAGAAAGGTTaGAAACAAAGTGAGGAGAATCAGTTTTCATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: KSEFESSHCQKG*KQSEENQFSSL Trigger: AAGAGATGAAAACTGATTCTCCTCACTTTGTTTCAAACCTTTCTGGCAGTGGGATGATTCGAATTCACTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CCA 90 bp | TCATCGTGGTTCCTGCGGCCGCCGAGGCGCGACGCTGGAGGGCTGTaGCGACGCGCTAAGGCCAGGCGGCAGGCGGCCCTCTCGGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: SSWFLRPPRRDAGGL*RRAKARRQAALSGG Trigger: GCCGCCCGAGAGGGCCGCCTGCCGCCTGGCCTTAGCGCGTCGCCACAGCCCTCCAGCGTCGCGCCTCGGCGGCCGCAGGAACCACGATGA 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CCA 90 bp | GATTGGGCACCGGGAGCCGGGAGCCGGGAGCCGGGAGTCGGGAGCTaGAGCCGGGGATTTGGCACTGTGTGGCGTTCCCACTCCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DWAPGAGSREPGVGS*SRGFGTVWRSHSRR Trigger: GCGCCGGGAGTGGGAACGCCACACAGTGCCAAATCCCCGGCTCCAGCTCCCGACTCCCGGCTCCCGGCTCCCGGCTCCCGGTGCCCAATC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS GCA 90 bp | GAAGCCCCTCAGCCAGGAGCAGCTCCTGCCTCTCATCGTGGTTCCTaGGGCCGCCGAGGCGCGACGCTGGAGGGCTGTGGCGACGCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: EAPQPGAAPASHRGS*GRRGATLEGCGDAL Trigger: TAGCGCGTCGCCACAGCCCTCCAGCGTCGCGCCTCGGCGGCCGCAGGAACCACGATGAGAGGCAGGAGCTGCTCCTGGCTGAGGGGCTTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CCA 90 bp | GCGCCGGGCCTCGCTGGAACGCGCATGGGTCCTTGTAAAGCTGCGTaGCCGCGTAGTACTGCTCCTCGCCGTTCATGGCTGCGGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: APGLAGTRMGPCKAA*PRSTAPRRSWLRPG Trigger: CCCGGGCCGCAGCCATGAACGGCGAGGAGCAGTACTACGCGGCCACGCAGCTTTACAAGGACCCATGCGCGTTCCAGCGAGGCCCGGCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CCA 90 bp | GGGGCTGGCGCTGAACTCCGGCGCCGGGCCTCGCTGGAACGCGCATaGGTCCTTGTAAAGCTGCGTGGCCGCGTAGTACTGCTCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GAGAELRRRASLERA*VLVKLRGRVVLLLA Trigger: GGCGAGGAGCAGTACTACGCGGCCACGCAGCTTTACAAGGACCCATGCGCGTTCCAGCGAGGCCCGGCGCCGGAGTTCAGCGCCAGCCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CCA 90 bp | TCCACGCCCGGGGTCCTCCTAGGCCCTCTGCTCCTCCTCGGCGAGTaGTTGAAGCCCCTCAGCCAGGAGCAGCTCCTGCCTCTCATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: STPGVLLGPLLLLGE*LKPLSQEQLLPLIV Trigger: CACGATGAGAGGCAGGAGCTGCTCCTGGCTGAGGGGCTTCAACCACTCGCCGAGGAGGAGCAGAGGGCCTAGGAGGACCCCGGGCGTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CAA 90 bp | CTCCTAGGCCCTCTGCTCCTCCTCGGCGAGTGGTTGAAGCCCCTCAGCCAGGAGGCTGGAGCCGGGGATTaGGCACTGTGTGGCGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLGPLLLLGEWLKPLSQEAGAGD*ALCGVP Trigger: GGGAACGCCACACAGTGCCAAATCCCCGGCTCCAGC...CTCCTGGCTGAGGGGCTTCAACCACTCGCCGAGGAGGAGCAGAGGGCCTAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CCA 90 bp | TGCCCACTGGCCTTTCCACGCGTGAGCTTTGGTAGACTTCATCCATaGGAAAGGCAGCTGGACGCGGTTGGGCTCCTCCAGGACGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CPLAFPRVSFGRLHP*ERQLDAVGLLQDAR Trigger: CCGGGCGTCCTGGAGGAGCCCAACCGCGTCCAGCTGCCTTTCCCATGGATGAAGTCTACCAAAGCTCACGCGTGGAAAGGCCAGTGGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CAA 90 bp | GCCACTGTGCTTGTCTTCAGCACAGCCTCTACCTCGGAACAGGAATTACGTCCAGGCAGCTGGACGCGGTaGGGCTCCTCCAGGACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ATVLVFSTASTSEQELRPGSWTR*GSSRTP Trigger: GGGCGTCCTGGAGGAGCCCAACCGCGTCCAGCTGCC...TGGACGTAATTCCTGTTCCGAGGTAGAGGCTGTGCTGAAGACAAGCACAGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CAA 90 bp | CCAAGGTGGAGTGCTGTAGGAGGGCAGGGATGTGCGCAACAGCCACAAACAACGAGGTGGGCCCCGCAATaGCCGCCCCATTCAACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRWSAVGGQGCAQQPQTTRWAPQ*PPHSTA Trigger: GGCAGTTGAATGGGGCGGCAATTGCGGGGCCCACCT...CGTTGTTTGTGGCTGTTGCGCACATCCCTGCCCTCCTACAGCACTCCACCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CAA 90 bp | CCCTTCGGTCTAAGGTGGGCCCCGCAATTGCCGCCCCATTCAACTGCCAGGGCGGGCCGTGAGATGTACTaGTTGAATAGGAACTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFGLRWAPQLPPHSTARAGREMY*LNRNSF Trigger: GAAGGAGTTCCTATTCAACAAGTACATCTCACGGCC...CGCCCTGGCAGTTGAATGGGGCGGCAATTGCGGGGCCCACCTTAGACCGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CAA 90 bp | AAAGGGGTGCAAGTTATAAGATGTGCAGTAGTGAAGTGTGCAGCTAGAGAAGAGGCCGTGCGCGTCCGCTaGTTCTCCTCCGGCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: KGVQVIRCAVVKCAAREEAVRVR*FSSGSA Trigger: TGCGGAGCCGGAGGAGAACAAGCGGACGCGCACGGC...CTCTTCTCTAGCTGCACACTTCACTACTGCACATCTTATAACTTGCACCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CAA 90 bp | TGTTCTCTTCCTCAGAAGAAAGGGGTGCAAGTTATAAGATGTGCAGTAGTGAAGCTCCTCGGCGAGTGGTaGAAGCCCCTCAGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSLPQKKGVQVIRCAVVKLLGEW*KPLSQE Trigger: CTCCTGGCTGAGGGGCTTCAACCACTCGCCGAGGAG...CTTCACTACTGCACATCTTATAACTTGCACCCCTTTCTTCTGAGGAAGAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CAA 90 bp | TGCCAGAAAGGTTTGAAACAAAGTGAGGAGAATCAGTTTTCATCTCTTCCCATAGCTGCTCGCCCTGCCTaGCAAGATGTTCTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CQKGLKQSEENQFSSLPIAARPA*QDVLFL Trigger: GAGGAAGAGAACATCTTGCAAGGCAGGGCGAGCAGC...TATGGGAAGAGATGAAAACTGATTCTCCTCACTTTGTTTCAAACCTTTCTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CAA 90 bp | TGCCAGAAAGGTTTGAAACAAAGTGAGGAGAATCAGTTTTCATCTCTTCCCATAACCAGGCCACTGTGCTaGTCTTCAGCACAGCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: CQKGLKQSEENQFSSLPITRPLC*SSAQPL Trigger: TAGAGGCTGTGCTGAAGACAAGCACAGTGGCCTGGT...TATGGGAAGAGATGAAAACTGATTCTCCTCACTTTGTTTCAAACCTTTCTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS-3UTR CAA 90 bp | TGCCAGAAAGGTTTGAAACAAAGTGAGGAGAATCAGTTTTCATCTCTTCCCATAATGGTACAGTTTCCATaGTCTTTGAAGAGCCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CQKGLKQSEENQFSSLPIMVQFP*SLKSRL Trigger: AAGCCGGCTCTTCAAAGACAATGGAAACTGTACCAT...TATGGGAAGAGATGAAAACTGATTCTCCTCACTTTGTTTCAAACCTTTCTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CCA 72 bp | TTCCTGCGGCCGCCGAGGCGCGACGCTGGAGGGCTGTaGCGACGCGCTAAGGCCAGGCGGCAGGCGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: FLRPPRRDAGGL*RRAKARRQAAL Trigger: GAGGGCCGCCTGCCGCCTGGCCTTAGCGCGTCGCCACAGCCCTCCAGCGTCGCGCCTCGGCGGCCGCAGGAA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS GCA 72 bp | CGTGGCCGCGTAGTACTGCTCCTCGCCGTTCATGGCTaGGGCCCGGGATTGGGCACCGGGAGCCGGGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: RGRVVLLLAVHG*GPGLGTGSREP Trigger: CGGCTCCCGGCTCCCGGTGCCCAATCCCGGGCCGCAGCCATGAACGGCGAGGAGCAGTACTACGCGGCCACG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CCA 72 bp | CCGGGAGCCGGGAGCCGGGAGCCGGGAGTCGGGAGCTaGAGCCGGGGATTTGGCACTGTGTGGCGTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PGAGSREPGVGS*SRGFGTVWRSH Trigger: GTGGGAACGCCACACAGTGCCAAATCCCCGGCTCCAGCTCCCGACTCCCGGCTCCCGGCTCCCGGCTCCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CCA 72 bp | GCTGCGTGGCCGCGTAGTACTGCTCCTCGCCGTTCATaGCTGCGGCCCGGGATTGGGCACCGGGAGCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: AAWPRSTAPRRS*LRPGIGHREPG Trigger: TCCCGGCTCCCGGTGCCCAATCCCGGGCCGCAGCCATGAACGGCGAGGAGCAGTACTACGCGGCCACGCAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CCA 72 bp | GCTGAACTCCGGCGCCGGGCCTCGCTGGAACGCGCATaGGTCCTTGTAAAGCTGCGTGGCCGCGTAGTACTG | + |
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Preference number: 6 (lower is better) Translates to: AELRRRASLERA*VLVKLRGRVVL Trigger: CAGTACTACGCGGCCACGCAGCTTTACAAGGACCCATGCGCGTTCCAGCGAGGCCCGGCGCCGGAGTTCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CAA 72 bp | GTAGACTTCATCCATGGGAAAGGCAGCTGGACGCGGTaGGGCTCCTCCAGGACGCCCGGCTCGGCTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VDFIHGKGSWTR*GSSRTPGSAPS Trigger: GGAGGGAGCCGAGCCGGGCGTCCTGGAGGAGCCCAACCGCGTCCAGCTGCCTTTCCCATGGATGAAGTCTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CCA 72 bp | CTCGCTGGAACGCGCATGGGTCCTTGTAAAGCTGCGTaGCCGCGTAGTACTGCTCCTCGCCGTTCATGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LAGTRMGPCKAA*PRSTAPRRSWL Trigger: CAGCCATGAACGGCGAGGAGCAGTACTACGCGGCCACGCAGCTTTACAAGGACCCATGCGCGTTCCAGCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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| CDS CCA 72 bp | GCCTTTCCACGCGTGAGCTTTGGTAGACTTCATCCATaGGAAAGGCAGCTGGACGCGGTTGGGCTCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: AFPRVSFGRLHP*ERQLDAVGLLQ Trigger: CTGGAGGAGCCCAACCGCGTCCAGCTGCCTTTCCCATGGATGAAGTCTACCAAAGCTCACGCGTGGAAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381033.5 |
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