RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDPR (Homo sapiens)

Ensembl gene IDs: ENSG00000090857

Ensembl transcript IDs: ENST00000288050.9, ENST00000398122.7, ENST00000564563.1, ENST00000565186.5, ENST00000567046.5, ENST00000568530.5

Found 889 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCCAGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTaGAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAA +
Preference number: 1 (lower is better)
Translates to: VPAHSTAEQENELPG*RHELPLRAASDTRQ
Trigger: TTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCTGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR GCA 90 bp GCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTaGCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACT +
Preference number: 1 (lower is better)
Translates to: AQQNRRTSCRAAGTS*PSGLHPTHGNPTRT
Trigger: AGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR GCA 90 bp GGTATCGAGTGCCAGCCCACAGCACAGCAGAACAGGAGAACGAGCTaGCGGGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACA +
Preference number: 1 (lower is better)
Translates to: GIECQPTAQQNRRTS*RAAGTSCPSGLHPT
Trigger: TGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCTGGCACTCGATACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR CCA 90 bp CCTGTTCCTCCTCTCCCAAGGCCTTCACAGCTGGTGTTCACTGGTTaGCCCTCCAGCCGGCAACACCTCTCCTCCTCTCTGCCTAGAGGC +
Preference number: 1 (lower is better)
Translates to: PVPPLPRPSQLVFTG*PSSRQHLSSSLPRG
Trigger: GCCTCTAGGCAGAGAGGAGGAGAGGTGTTGCCGGCTGGAGGGCCAACCAGTGAACACCAGCTGTGAAGGCCTTGGGAGAGGAGGAACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 90 bp CATCTGCCCAAGGGCCTGTTCCTCCTCTCCCAAGGCCTTCACAGCTaGTGTTCACTGGTTGGCCCTCCAGCCGGCAACACCTCTCCTCCT +
Preference number: 1 (lower is better)
Translates to: HLPKGLFLLSQGLHS*CSLVGPPAGNTSPP
Trigger: AGGAGGAGAGGTGTTGCCGGCTGGAGGGCCAACCAGTGAACACCAGCTGTGAAGGCCTTGGGAGAGGAGGAACAGGCCCTTGGGCAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 90 bp GGCTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCGTGCCCTaGGACCTGCACCACCCCGGCTTGCCCTGCCTTGAGATGCAGAAT +
Preference number: 1 (lower is better)
Translates to: GCSKKMEPKGEGLVP*DLHHPGLPCLEMQN
Trigger: ATTCTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR CCA 90 bp TTCCTGCTGGATTTGCAGCCACGGCTCTGGATCTGGGGCATCTACTaGCCTCCCCTGTTCACTCAAGAGGCCACTGCCTCTCAGGAGTCC +
Preference number: 1 (lower is better)
Translates to: FLLDLQPRLWIWGIY*PPLFTQEATASQES
Trigger: GGACTCCTGAGAGGCAGTGGCCTCTTGAGTGAACAGGGGAGGCCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 90 bp CCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTAGGCACTGCTGGTaGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCTCTCCCC +
Preference number: 1 (lower is better)
Translates to: PGKRGAPGCSCRHCW*SCQHTAHSGKWALP
Trigger: GGGGAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGCGCCACGTTTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR GCA 90 bp CCATCTTCGGAGGTAAGTCTGCTCCCTGCTGGTAATGCCTGCATCTaGCCAAGGGCCTGTTCCTCCTCTCCCAAGGCCTTCACAGCTGGT +
Preference number: 1 (lower is better)
Translates to: PSSEVSLLPAGNACI*PRACSSSPKAFTAG
Trigger: ACCAGCTGTGAAGGCCTTGGGAGAGGAGGAACAGGCCCTTGGGCAGATGCAGGCATTACCAGCAGGGAGCAGACTTACCTCCGAAGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 90 bp TGTCCCTCCTTATTCCTGCTGGATTTGCAGCCACGGCTCTGGATCTaGGGCATCTACTGGCCTCCCCTGTTCACTCAAGAGGCCACTGCC +
Preference number: 1 (lower is better)
Translates to: CPSLFLLDLQPRLWI*GIYWPPLFTQEATA
Trigger: GGCAGTGGCCTCTTGAGTGAACAGGGGAGGCCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 90 bp GATGATCCAAGGCCAGTGGGCCTCCCAGTGAGAACCAAACAGGAGTaGCCAGGCTCCACTCCTGGGGCCAGAGTGAAACCGGGGTTTAAT +
Preference number: 1 (lower is better)
Translates to: DDPRPVGLPVRTKQE*PGSTPGARVKPGFN
Trigger: ATTAAACCCCGGTTTCACTCTGGCCCCAGGAGTGGAGCCTGGCCACTCCTGTTTGGTTCTCACTGGGAGGCCCACTGGCCTTGGATCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 90 bp AGCCCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTAGGCACTGCTaGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCTCTC +
Preference number: 1 (lower is better)
Translates to: SPGKRGAPGCSCRHC*WSCQHTAHSGKWAL
Trigger: GAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGCGCCACGTTTGCCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR GCA 90 bp CTGTCTCCATCTTCGGAGGTAAGTCTGCTCCCTGCTGGTAATGCCTaGATCTGCCCAAGGGCCTGTTCCTCCTCTCCCAAGGCCTTCACA +
Preference number: 1 (lower is better)
Translates to: LSPSSEVSLLPAGNA*ICPRACSSSPKAFT
Trigger: TGTGAAGGCCTTGGGAGAGGAGGAACAGGCCCTTGGGCAGATGCAGGCATTACCAGCAGGGAGCAGACTTACCTCCGAAGATGGAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 90 bp ATGGATGAGGAGGCTGTGGTTGTCCCTCCTTATTCCTGCTGGATTTaGAGCCACGGCTCTGGATCTGGGGCATCTACTGGCCTCCCCTGT +
Preference number: 1 (lower is better)
Translates to: MDEEAVVVPPYSCWI*SHGSGSGASTGLPC
Trigger: ACAGGGGAGGCCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACAGCCTCCTCATCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 90 bp AAACGTGGCGCTCCAGGCTGTAGCTGTAGGCACTGCTGGTGGTCTTaGCAACATACTGCCCATTCCGGTAAATGGGCTCTCCCCACCAAG +
Preference number: 1 (lower is better)
Translates to: KRGAPGCSCRHCWWS*QHTAHSGKWALPTK
Trigger: CTTGGTGGGGAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGCGCCACGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR GCA 90 bp CAAAGCCCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTAGGCACTaGTGGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCT +
Preference number: 1 (lower is better)
Translates to: QSPGKRGAPGCSCRH*WWSCQHTAHSGKWA
Trigger: AGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGCGCCACGTTTGCCTGGGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR CCA 90 bp TGTGGTTGTCCCTCCTTATTCCTGCTGGATTTGCAGCCACGGCTCTaGATCTGGGGCATCTACTGGCCTCCCCTGTTCACTCAAGAGGCC +
Preference number: 1 (lower is better)
Translates to: CGCPSLFLLDLQPRL*IWGIYWPPLFTQEA
Trigger: GGCCTCTTGAGTGAACAGGGGAGGCCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 90 bp GATCTGGGGCATCTACTGGCCTCCCCTGTTCACTCAAGAGGCCACTaGCTCTCAGGAGTCCAGAATGCTCTGATATCTGACACCGGTGGT +
Preference number: 1 (lower is better)
Translates to: DLGHLLASPVHSRGH*LSGVQNALISDTGG
Trigger: ACCACCGGTGTCAGATATCAGAGCATTCTGGACTCCTGAGAGGCAGTGGCCTCTTGAGTGAACAGGGGAGGCCAGTAGATGCCCCAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 90 bp TCTGCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTaGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACAC +
Preference number: 1 (lower is better)
Translates to: SALCWRVKPGIPAAL*NSAQPARLKGPGQH
Trigger: GTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR CCA 90 bp ACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGAGGCTGCCCTaGTGGCATCACTTCCCATGTAAGTCACTCAGCTCCATGTCATCC +
Preference number: 1 (lower is better)
Translates to: TPTLGQDDGEEVRLP*WHHFPCKSLSSMSS
Trigger: GGATGACATGGAGCTGAGTGACTTACATGGGAAGTGATGCCACCAGGGCAGCCTCACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR TCA 90 bp CTGTTCACTCAAGAGGCCACTGCCTCTCAGGAGTCCAGAATGCTCTaGTATCTGACACCGGTGGTCAGGAAGTTATGCTGCCCTCTCCTC +
Preference number: 1 (lower is better)
Translates to: LFTQEATASQESRML*YLTPVVRKLCCPLL
Trigger: GAGGAGAGGGCAGCATAACTTCCTGACCACCGGTGTCAGATATCAGAGCATTCTGGACTCCTGAGAGGCAGTGGCCTCTTGAGTGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 90 bp AGGAAAGCAAGCAAGCAGGTAAAACTCCGGGTGTGCATGAGGAGATaGTCCAAGGCCAGTGGGCCTCCCAGTGAGAACCAAACAGGAGTG +
Preference number: 1 (lower is better)
Translates to: RKASKQVKLRVCMRR*SKASGPPSENQTGV
Trigger: CACTCCTGTTTGGTTCTCACTGGGAGGCCCACTGGCCTTGGATCATCTCCTCATGCACACCCGGAGTTTTACCTGCTTGCTTGCTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 90 bp CTTATCAGTGAGGTAGATAATCATCCTCTTGCCAGAGGTATCGAGTaGCAGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCT +
Preference number: 1 (lower is better)
Translates to: LISEVDNHPLARGIE*QPTAQQNRRTSCRA
Trigger: AGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCTGGCACTCGATACCTCTGGCAAGAGGATGATTATCTACCTCACTGATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR GCA 90 bp TGGTCGTCCAGGATGAACATGGTGAGGCGTTTATACACTCCATTCTaGTTCTGCTGCAGGAGGGCGTCGCGACCAATGAAATCCATGCCC +
Preference number: 1 (lower is better)
Translates to: WSSRMNMVRRLYTPF*FCCRRASRPMKSMP
Trigger: GGGCATGGATTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAAACGCCTCACCATGTTCATCCTGGACGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR CCA 90 bp AGGCACTGCTGGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATaGGCTCTCCCCACCAAGGCCAAAGGTCTAGGTCTGAATCATGGT +
Preference number: 1 (lower is better)
Translates to: RHCWWSCQHTAHSGK*ALPTKAKGLGLNHG
Trigger: ACCATGATTCAGACCTAGACCTTTGGCCTTGGTGGGGAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR TCA 90 bp CGTGCTGCCCAGAATGAGCTGAGACACAAGGCAAACCCTTGGAAATaGCACATGGATGAGGAGGCTGTGGTTGTCCCTCCTTATTCCTGC +
Preference number: 1 (lower is better)
Translates to: RAAQNELRHKANPWK*HMDEEAVVVPPYSC
Trigger: GCAGGAATAAGGAGGGACAACCACAGCCTCCTCATCCATGTGTCATTTCCAAGGGTTTGCCTTGTGTCTCAGCTCATTCTGGGCAGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 90 bp AGGATGAACATGGTGAGGCGTTTATACACTCCATTCTGCTTCTGCTaGAGGAGGGCGTCGCGACCAATGAAATCCATGCCCTCTATGGGG +
Preference number: 1 (lower is better)
Translates to: RMNMVRRLYTPFCFC*RRASRPMKSMPSMG
Trigger: CCCCATAGAGGGCATGGATTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAAACGCCTCACCATGTTCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565186.5
3UTR CCA 90 bp GACACAAGGCAAACCCTTGGAAATGACACATGGATGAGGAGGCTGTaGTTGTCCCTCCTTATTCCTGCTGGATTTGCAGCCACGGCTCTG +
Preference number: 1 (lower is better)
Translates to: DTRQTLGNDTWMRRL*LSLLIPAGFAATAL
Trigger: CAGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACAGCCTCCTCATCCATGTGTCATTTCCAAGGGTTTGCCTTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 90 bp CGGAAAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTaGCAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTA +
Preference number: 1 (lower is better)
Translates to: RKAPIILASLLPPRR*QGRRLTFKCMQRQV
Trigger: TACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 90 bp AGCTTTCTACCCCACGCCCATTGTTCCGAAGAAGGAGAGGCTATGTaGGGCGGATGGGAACCCACACACCGAGATGAACTTTTCTCTTTC +
Preference number: 1 (lower is better)
Translates to: SFLPHAHCSEEGEAM*GGWEPTHRDELFSF
Trigger: GAAAGAGAAAAGTTCATCTCGGTGTGTGGGTTCCCATCCGCCCCACATAGCCTCTCCTTCTTCGGAACAATGGGCGTGGGGTAGAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR TCA 90 bp ATGAGATCTCTTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTaGAAAATACAGTGGTCACTGTGCAGTTCTCTCTGCTGGAGCCTG +
Preference number: 1 (lower is better)
Translates to: MRSLQCRGTGIPGRA*KIQWSLCSSLCWSL
Trigger: CAGGCTCCAGCAGAGAGAACTGCACAGTGACCACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAAGAGATCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 90 bp TCCAGGATGAACATGGTGAGGCGTTTATACACTCCATTCTGCTTCTaGTGCAGGAGGGCGTCGCGACCAATGAAATCCATGCCCTCTATG +
Preference number: 1 (lower is better)
Translates to: SRMNMVRRLYTPFCF*CRRASRPMKSMPSM
Trigger: CATAGAGGGCATGGATTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAAACGCCTCACCATGTTCATCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565186.5
3UTR GCA 90 bp TCCAGGATGAACATGGTGAGGCGTTTATACACTCCATTCTGCTTCTaGTGCAGGAGGGCGTCGCGACCAATGAAATCCATGCCCTTCTCT +
Preference number: 1 (lower is better)
Translates to: SRMNMVRRLYTPFCF*CRRASRPMKSMPFS
Trigger: AGAGAAGGGCATGGATTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAAACGCCTCACCATGTTCATCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564563.1
3UTR GCA 90 bp AATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTaGTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTG +
Preference number: 1 (lower is better)
Translates to: NLKAAVTITHVHSGA*FCPVRHTSCHHEKL
Trigger: CAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
3UTR GCA 90 bp GGTGGTCAGGAAGTTATGCTGCCCTCTCCTCTTGAACAGCTAAGATaGTTGGACACTAGACAGAGGCAAAGCAGTTATGCCAGAAGCAGG +
Preference number: 1 (lower is better)
Translates to: GGQEVMLPSPLEQLR*LDTRQRQSSYARSR
Trigger: CCTGCTTCTGGCATAACTGCTTTGCCTCTGTCTAGTGTCCAAGCATCTTAGCTGTTCAAGAGGAGAGGGCAGCATAACTTCCTGACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 90 bp GTGTTAGTGCCACATTCACAGGGGCAGAAATGCTCGGTCACCCTGTaGACCCAAAGTCACCCAGGATCTCTAGAAAAGATCCCACTTACT +
Preference number: 1 (lower is better)
Translates to: VLVPHSQGQKCSVTL*TQSHPGSLEKIPLT
Trigger: AGTAAGTGGGATCTTTTCTAGAGATCCTGGGTGACTTTGGGTGCACAGGGTGACCGAGCATTTCTGCCCCTGTGAATGTGGCACTAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR CCA 90 bp GATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTaGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGA +
Preference number: 1 (lower is better)
Translates to: DAEFESSCHHHSCPQ*SLLLSCQTYLLPPR
Trigger: TCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
3UTR CCA 90 bp AGCCAACGCAAATTCCTCCGCCAGGCCAGTCTTCTAGTGCCAATATaGAGACTGTGGGCCACAGAAGATTCCCTTCTATTTCAGGTTCTC +
Preference number: 1 (lower is better)
Translates to: SQRKFLRQASLLVPI*RLWATEDSLLFQVL
Trigger: GAGAACCTGAAATAGAAGGGAATCTTCTGTGGCCCACAGTCTCCATATTGGCACTAGAAGACTGGCCTGGCGGAGGAATTTGCGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 90 bp AGGATGAACATGGTGAGGCGTTTATACACTCCATTCTGCTTCTGCTaGAGGAGGGCGTCGCGACCAATGAAATCCATGCCCTTCTCTAAT +
Preference number: 1 (lower is better)
Translates to: RMNMVRRLYTPFCFC*RRASRPMKSMPFSN
Trigger: ATTAGAGAAGGGCATGGATTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAAACGCCTCACCATGTTCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564563.1
3UTR GCA 90 bp ACAAATACGTTTTCCTTTACAAAGATGGCTTTGGAGGGGTGCAAATaGTACGTGTTTGGAAGAGCAGAGGAGGCCTGCAGCTCTCAGTCA +
Preference number: 1 (lower is better)
Translates to: TNTFSFTKMALEGCK*YVFGRAEEACSSQS
Trigger: TGACTGAGAGCTGCAGGCCTCCTCTGCTCTTCCAAACACGTAGCATTTGCACCCCTCCAAAGCCATCTTTGTAAAGGAAAACGTATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 90 bp ATGGAAGTCAATGACCCTGGCAGTGCTAAGAACAGAAGTCACACGTaGCCTGACGATGAAGGGGAGGTAATTAAAGACATTTCAAGGGAG +
Preference number: 1 (lower is better)
Translates to: MEVNDPGSAKNRSHT*PDDEGEVIKDISRE
Trigger: CTCCCTTGAAATGTCTTTAATTACCTCCCCTTCATCGTCAGGCCACGTGTGACTTCTGTTCTTAGCACTGCCAGGGTCATTGACTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 90 bp AAATTCCTCCGCCAGGCCAGTCTTCTAGTGCCAATATGGAGACTGTaGGCCACAGAAGATTCCCTTCTATTTCAGGTTCTCAAAAAGTGG +
Preference number: 1 (lower is better)
Translates to: KFLRQASLLVPIWRL*ATEDSLLFQVLKKW
Trigger: CCACTTTTTGAGAACCTGAAATAGAAGGGAATCTTCTGTGGCCCACAGTCTCCATATTGGCACTAGAAGACTGGCCTGGCGGAGGAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 90 bp TCCTCTCCTAGCAAGACAAGCAGTCTGTTGCTCAGAGGGGGAAACTaGTGTCATTTAACAGGAGGTCAGGATTTCTGGTTCTACTTCAAC +
Preference number: 1 (lower is better)
Translates to: SSPSKTSSLLLRGGN*CHLTGGQDFWFYFN
Trigger: GTTGAAGTAGAACCAGAAATCCTGACCTCCTGTTAAATGACATCAGTTTCCCCCTCTGAGCAACAGACTGCTTGTCTTGCTAGGAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 90 bp CTGTGGGCCACAGAAGATTCCCTTCTATTTCAGGTTCTCAAAAAGTaGTGTAGACTCAGGCAAATGCCAGGAAATGTGTCCATATGCCAG +
Preference number: 1 (lower is better)
Translates to: LWATEDSLLFQVLKK*CRLRQMPGNVSICQ
Trigger: CTGGCATATGGACACATTTCCTGGCATTTGCCTGAGTCTACACCACTTTTTGAGAACCTGAAATAGAAGGGAATCTTCTGTGGCCCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 90 bp GCTTTTCTGGCTTCAGTACCAATGATCACAGAAGGAACATCTTCCTaGTGCAAGCTTAGATGGAAGTCAATGACCCTGGCAGTGCTAAGA +
Preference number: 1 (lower is better)
Translates to: AFLASVPMITEGTSS*CKLRWKSMTLAVLR
Trigger: TCTTAGCACTGCCAGGGTCATTGACTTCCATCTAAGCTTGCATCAGGAAGATGTTCCTTCTGTGATCATTGGTACTGAAGCCAGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 90 bp ACTTGCTCCAAGACAACTAGACCCCCAAACAGAATTCTAATCATATaGTCCTCTAACAAGCCAACCAGAACCTTCCAAAAAGGTTTAGGC +
Preference number: 1 (lower is better)
Translates to: TCSKTTRPPNRILII*SSNKPTRTFQKGLG
Trigger: GCCTAAACCTTTTTGGAAGGTTCTGGTTGGCTTGTTAGAGGAGCATATGATTAGAATTCTGTTTGGGGGTCTAGTTGTCTTGGAGCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 90 bp GGACTCTACAGTAGTTACAATGGCATTTTTATATGTCCCAAGTGTTaGCTGGAGAGTAAAGTGTTAACTGAGCTGCTAGAACACCCTTCA +
Preference number: 1 (lower is better)
Translates to: GLYSSYNGIFICPKC*LESKVLTELLEHPS
Trigger: TGAAGGGTGTTCTAGCAGCTCAGTTAACACTTTACTCTCCAGTCAACACTTGGGACATATAAAAATGCCATTGTAACTACTGTAGAGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR CCA 90 bp AAATTCTTCTGGATTCAATTACAAATACGTTTTCCTTTACAAAGATaGCTTTGGAGGGGTGCAAATGCTACGTGTTTGGAAGAGCAGAGG +
Preference number: 1 (lower is better)
Translates to: KFFWIQLQIRFPLQR*LWRGANATCLEEQR
Trigger: CCTCTGCTCTTCCAAACACGTAGCATTTGCACCCCTCCAAAGCCATCTTTGTAAAGGAAAACGTATTTGTAATTGAATCCAGAAGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 90 bp TTTCTTCCACTCAACTGTGCTTCTCCTGAATCCATGTGCCTGAAATaGCATATGCAAGGTGAACATTCTTTATACTGTGTTAATACTGCT +
Preference number: 1 (lower is better)
Translates to: FLPLNCASPESMCLK*HMQGEHSLYCVNTA
Trigger: AGCAGTATTAACACAGTATAAAGAATGTTCACCTTGCATATGTCATTTCAGGCACATGGATTCAGGAGAAGCACAGTTGAGTGGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR TCA 90 bp TATGGAGACAGCTTTTATTATTTCGATTTGGATCCTGGTAAGTGGTaGTACTGCTATGTAACAGTTAAAGCACAAATGTATTGCCATAGT +
Preference number: 1 (lower is better)
Translates to: YGDSFYYFDLDPGKW*YCYVTVKAQMYCHS
Trigger: ACTATGGCAATACATTTGTGCTTTAACTGTTACATAGCAGTATCACCACTTACCAGGATCCAAATCGAAATAATAAAAGCTGTCTCCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp CCGGGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCAGGGAGAGGGACTCGTaGCCTGAGACCTGCACCACC +
Preference number: 2 (lower is better)
Translates to: PGCRHELPLRAASDTRQPRERDS*PETCTT
Trigger: GGTGGTGCAGGTCTCAGGGCACGAGTCCCTCTCCCT...GGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCGCTGCCCCTCAGGGCTaGATCCGACACACGGCAACC +
Preference number: 2 (lower is better)
Translates to: AAPQGCIRHTATPPELIGAAPQG*IRHTAT
Trigger: GGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATGCTGCCCCTCAGGGCTaGATCCGACACACGGCAACC +
Preference number: 2 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNAAPQG*IRHTAT
Trigger: GGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCACTGCTGGTGGTCTTaGCAACATACTGCCCATTCC +
Preference number: 2 (lower is better)
Translates to: GCRHELPLRAASDTRQPHHCWWS*QHTAHS
Trigger: GGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTG...GTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR GCA 90 bp TTGGCCTTGGCCTGGAAGCGGTATCCCGCGATGTCAATCTCATACTCTCCCCGGTCGTGCCCTGAGACCTaGACCACCCCGGCTTGCCCT +
Preference number: 2 (lower is better)
Translates to: LALAWKRYPAMSISYSPRSCPET*TTPACP
Trigger: AGGGCAAGCCGGGGTGGTGCAGGTCTCAGGGCACGA...CCGGGGAGAGTATGAGATTGACATCGCGGGATACCGCTTCCAGGCCAAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR GCA 90 bp CTTCACAGCTGGTGTTCACTGGTTGGCCCTCCAGCCGGCAACACCTCTCCTCCTAGGGAGAGGGACTCGTaGCCTGAGACCTGCACCACC +
Preference number: 2 (lower is better)
Translates to: LHSWCSLVGPPAGNTSPPRERDS*PETCTT
Trigger: GGTGGTGCAGGTCTCAGGGCACGAGTCCCTCTCCCT...AGGAGGAGAGGTGTTGCCGGCTGGAGGGCCAACCAGTGAACACCAGCTGTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp GGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCACTCATGTCCACAGTaGAGCTTGCTTCTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: GCRHELPLRAASDTRQPHHSCPQ*SLLLSC
Trigger: ACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTG...GTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp GGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCCCACACTCATCTCCTaGAAGTTGCTCGTTACAGGT +
Preference number: 2 (lower is better)
Translates to: GCRHELPLRAASDTRQPHPTLIS*KLLVTG
Trigger: ACCTGTAACGAGCAACTTCCAGGAGATGAGTGTGGG...GTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564563.1
3UTR-3UTR GCA 90 bp GGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCTCTCCCCACCAAGGTCGTGCCCTGAGACCTaGACCACCCCGGCTTGCCCT +
Preference number: 2 (lower is better)
Translates to: GGLANILPIPVNGLSPPRSCPET*TTPACP
Trigger: AGGGCAAGCCGGGGTGGTGCAGGTCTCAGGGCACGA...CCTTGGTGGGGAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR GCA 90 bp CAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTAACGAGCTGCCGGGCTaGAGGCACGAGCTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: QWSLLLSCQTYLLPPREANELPG*RHELPL
Trigger: GAGGGGCAGCTCGTGCCTGCAGCCCGGCAGCTCGTT...AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTAACGAGCTGCCGGGCTaGAGGCACGAGCTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: GKQRHCLKAQGTSGHPHCNELPG*RHELPL
Trigger: GAGGGGCAGCTCGTGCCTGCAGCCCGGCAGCTCGTT...ACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCACTCCATTCTGCTTCTaGTGCAGGAGGGCGTCGCGA +
Preference number: 2 (lower is better)
Translates to: AAPQGCIRHTATPPELIGTPFCF*CRRASR
Trigger: TCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGT...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR CAA 90 bp GCGGGGAGGGAGGCGCTGACGGAGAGACCCATGGCTCACCACTTATaGCGTGTACACAAGGCCTGGGGCAAGCCTCACAAGTCTACCATT +
Preference number: 2 (lower is better)
Translates to: AGREALTERPMAHHL*RVHKAWGKPHKSTI
Trigger: AATGGTAGACTTGTGAGGCTTGCCCCAGGCCTTGTGTACACGCAATAAGTGGTGAGCCATGGGTCTCTCCGTCAGCGCCTCCCTCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR-3UTR TCA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCGGGCGTCGCGACCAATaGAATCCATGCCCTTCTCTA +
Preference number: 2 (lower is better)
Translates to: AAPQGCIRHTATPPELIGGRRDQ*NPCPSL
Trigger: TAGAGAAGGGCATGGATTTCATTGGTCGCGACGCCC...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564563.1
3UTR-3UTR GCA 90 bp GCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGAACTCAGCATCGTGCCCTGAGACCTaGACCACCCCGGCTTGCCCT +
Preference number: 2 (lower is better)
Translates to: ALCWRVKPGIPAALWNSASCPET*TTPACP
Trigger: AGGGCAAGCCGGGGTGGTGCAGGTCTCAGGGCACGA...TGCTGAGTTCCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp GCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGAGCTGTAGGCACTGCTaGTGGTCTTGCCAACATACT +
Preference number: 2 (lower is better)
Translates to: AHSTAEQENELPGCRHELSCRHC*WSCQHT
Trigger: AGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCT...CAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR TCA 90 bp AGCCCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTAGGCACTGCTGGTGGTCTCGGCTTGCCCTGCCTTaGGATGCAGAATTTGAAAGC +
Preference number: 2 (lower is better)
Translates to: SPGKRGAPGCSCRHCWWSRLALP*DAEFES
Trigger: GCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCG...AGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGCGCCACGTTTGCCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR TCA 90 bp GCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGGGGAAAATGAAGCATTaGGGCTGGACAACAGTCCAT +
Preference number: 2 (lower is better)
Translates to: AHSTAEQENELPGCRHELGKMKH*GWTTVH
Trigger: ATGGACTGTTGTCCAGCCTCAATGCTTCATTTTCCC...CAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp CTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCGTGCCCTGAGACCTGCATGCACCACCCCGGCTTaGCCTGCCTTGAGATGCAGA +
Preference number: 2 (lower is better)
Translates to: LLQENGTQGRGTRALRPACTTPA*PALRCR
Trigger: TCTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCA...TGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTAACAGGAGAACGAGCTaGCGGGCTGCAGGCACGAGC +
Preference number: 2 (lower is better)
Translates to: GKQRHCLKAQGTSGHPHCNRRTS*RAAGTS
Trigger: GCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTT...ACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCAAGCTTGGCCTTGGCCTaGAAGCGGTATCCCGCGATG +
Preference number: 2 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPSLALA*KRYPAM
Trigger: CATCGCGGGATACCGCTTCCAGGCCAAGGCCAAGCT...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR TCA 90 bp AAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGGGAGGACAGTGGGCCTCCCAGTaGGAACCAAACAGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: KLPSFLHRYCHQDGGKGGQWASQ*EPNRSG
Trigger: GCCACTCCTGTTTGGTTCTCACTGGGAGGCCCACTG...TCCTCCCTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp ACTGCTGGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCTCTCCCCATGCACCACCCCGGCTTaGCCTGCCTTGAGATGCAGA +
Preference number: 2 (lower is better)
Translates to: TAGGLANILPIPVNGLSPCTTPA*PALRCR
Trigger: TCTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCA...TGGGGAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR GCA 90 bp GTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCGTGCCCTGAGACCTaGACCACCCCGGCTTGCCCT +
Preference number: 2 (lower is better)
Translates to: VTITHVHSGACFCPVRHTSCPET*TTPACP
Trigger: AGGGCAAGCCGGGGTGGTGCAGGTCTCAGGGCACGA...GGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTGCCAGAGGTATCGAGTaGCAGCCCACAGCACAGCAG +
Preference number: 2 (lower is better)
Translates to: GKQRHCLKAQGTSGHPHCARGIE*QPTAQQ
Trigger: CTGCTGTGCTGTGGGCTGGCACTCGATACCTCTGGC...ACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGAACTCAGCAGCCAGAGGTATCGAGTaGCAGCCCACAGCACAGCAG +
Preference number: 2 (lower is better)
Translates to: ALCWRVKPGIPAALWNSAARGIE*QPTAQQ
Trigger: CTGCTGTGCTGTGGGCTGGCACTCGATACCTCTGGC...TGCTGAGTTCCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp TCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGCCTGCTGGTAATGCCTaGATCTGCCCAAGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: SLELSTARKVERPRTTHLPAGNA*ICPRAC
Trigger: ACAGGCCCTTGGGCAGATGCAGGCATTACCAGCAGG...CAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp ACTGCTGGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCTCTCCCCACCATTCTGCTTCTGCTaGAGGAGGGCGTCGCGACCA +
Preference number: 2 (lower is better)
Translates to: TAGGLANILPIPVNGLSPPFCFC*RRASRP
Trigger: TGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGG...TGGGGAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR GCA 90 bp GCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGTCCTCAGAAAAATTGTaGACAAAGCCCAGGCAAACG +
Preference number: 2 (lower is better)
Translates to: AHSTAEQENELPGCRHELSSEKL*TKPRQT
Trigger: CGTTTGCCTGGGCTTTGTGCACAATTTTTCTGAGGA...CAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CCA 90 bp CAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTCTCCTGATAGGGAGGCTGCCCTaGCCCAAAGGTCTGCTAATG +
Preference number: 2 (lower is better)
Translates to: QRHCLKAQGTSGHPHCLLIGRLP*PKGLLM
Trigger: CATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTAT...CAGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATCTGGAGAGTCAAACCTaGAATTCCGGCAGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNLESQT*NSGSSL
Trigger: CAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAG...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp AGCTTTCTACCCCACGCCCATTGTTCCGAAGAAGGAGAGGCTATGTGGGGCGGAAGCGCAGGGCACTTCTaGGCACCCACATTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: SFLPHAHCSEEGEAMWGGSAGHF*APTLSP
Trigger: AGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCT...TCCGCCCCACATAGCCTCTCCTTCTTCGGAACAATGGGCGTGGGGTAGAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR-3UTR CCA 90 bp TGTAGCTCTGCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGCTGGTGTTCACTGGTTaGCCCTCCAGCCGGCAACAC +
Preference number: 2 (lower is better)
Translates to: CSSALCWRVKPGIPAALWLVFTG*PSSRQH
Trigger: GTGTTGCCGGCTGGAGGGCCAACCAGTGAACACCAG...CCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR TCA 90 bp TCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGCCAGGACAACACACCTaGTCCCTTCCCCTCCCTATT +
Preference number: 2 (lower is better)
Translates to: SLELSTARKVERPRTTHLPGQHT*SLPLPI
Trigger: AATAGGGAGGGGAAGGGATCAGGTGTGTTGTCCTGG...CAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp TCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGAACAGAGACACTGCCTaGAAGCGCAGGGCACTTCTG +
Preference number: 2 (lower is better)
Translates to: SLELSTARKVERPRTTHLNRDTA*KRRALL
Trigger: CAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTT...CAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp TTGGCCTTGGCCTGGAAGCGGTATCCCGCGATGTCAATCTCATACTCTCCCCGGGTCAGACATACCTCCTaGCACCACGAGAAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: LALAWKRYPAMSISYSPRVRHTS*HHEKLS
Trigger: ACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGAC...CCGGGGAGAGTATGAGATTGACATCGCGGGATACCGCTTCCAGGCCAAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR GCA 90 bp GAGATGAAGAAAATTATAGGGAGGCTGCCCTGGCCCAAAGGTCTGCTAATGGCTGCTGCCCCTCAGGGCTaGATCCGACACACGGCAACC +
Preference number: 2 (lower is better)
Translates to: EMKKIIGRLPWPKGLLMAAAPQG*IRHTAT
Trigger: GGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC...AGCCATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTATAATTTTCTTCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCCCACACTCATCTCCTTaGAAAAGAGGCTTGGGAAGT +
Preference number: 2 (lower is better)
Translates to: AAPQGCIRHTATPPELIGPHSSP*KRGLGS
Trigger: ACTTCCCAAGCCTCTTTTGCAAGGAGATGAGTGTGG...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565186.5
3UTR-3UTR GCA 90 bp GGGGGAAAGGAGGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACCCATTCTGCTTCTGCTaGAGGAGGGCGTCGCGACCA +
Preference number: 2 (lower is better)
Translates to: GGKEEKRSLALCNVHPLDPFCFC*RRASRP
Trigger: TGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGG...GTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCCTCCTTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR GCA 90 bp AGCTCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACTCTGCTGTCACCACTTaGTCTTCCCCCGTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: SSLELSTARKVERPRTTHSAVTT*SSPVSS
Trigger: TGAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGA...GTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CCA 90 bp CTCGGAAAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGATTCCGGCAGCTCTCTaGAACTCAGCACAGCCCGCA +
Preference number: 2 (lower is better)
Translates to: LGKLPSFLHRYCHQDGGKIPAAL*NSAQPA
Trigger: TGCGGGCTGTGCTGAGTTCCAGAGAGCTGCCGGAAT...CTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTTTCCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp CAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTCTCCTGCTGGAGAGTCAAACCTaGAATTCCGGCAGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: QRHCLKAQGTSGHPHCLLLESQT*NSGSSL
Trigger: CAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAG...CAGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp CCCGGCTTGCCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTCGACAGGGTAGAGCTTaGCCTTGGCCTGGAAGCGGT +
Preference number: 2 (lower is better)
Translates to: PGLPCLEMQNLKAAVTITRQGRA*PWPGSG
Trigger: ACCGCTTCCAGGCCAAGGCCAAGCTCTACCCTGTCG...AGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR CAA 90 bp CTGCTAGAACACCCTTCACTGAAAGAGCTTTCTACCCCACGCCCATaGTTCCGAAGAAGGAGAGGCTATGTGGGGCGGATGGGAACCCAC +
Preference number: 2 (lower is better)
Translates to: LLEHPSLKELSTPRP*FRRRRGYVGRMGTH
Trigger: GTGGGTTCCCATCCGCCCCACATAGCCTCTCCTTCTTCGGAACAATGGGCGTGGGGTAGAAAGCTCTTTCAGTGAAGGGTGTTCTAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR CAA 90 bp GCCTGGAAGCGGTATCCCGCGATGTCAATCTCATACTCTCCCCGGTaGATGAAATCTGCTGTCACCACTTGCTCTTCCCCCGTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: AWKRYPAMSISYSPR*MKSAVTTCSSPVSS
Trigger: TGAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGATTTCATCAACCGGGGAGAGTATGAGATTGACATCGCGGGATACCGCTTCCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR TCA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACAAGTGAGGCTGACCTaGCAAAGTCAAACGCACTGG +
Preference number: 2 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPQVRLT*QSQTHW
Trigger: CCAGTGCGTTTGACTTTGTCAGGTCAGCCTCACTTG...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp CAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGGAGCTGCAGGCACGAGCTaGCCCTCAGGGCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: QGRRLTFKCMQRQVIYCGAAGTS*PSGLHP
Trigger: CGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGC...TCCACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp GTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCGCCAGAGGTATCGAGTaGCAGCCCACAGCACAGCAG +
Preference number: 2 (lower is better)
Translates to: VTITHVHSGACFCPVRHTARGIE*QPTAQQ
Trigger: CTGCTGTGCTGTGGGCTGGCACTCGATACCTCTGGC...GGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp CTGCCCTGGCCCAAAGGTCTGCTAATGGCTTCTGCAGGGAGGATGAGGATGGTGCGGTCTCTAGCCTTATaGAACGTACACCCTTTGGAC +
Preference number: 2 (lower is better)
Translates to: LPWPKGLLMASAGRMRMVRSLAL*NVHPLD
Trigger: GTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCG...CACCATCCTCATCCTCCCTGCAGAAGCCATTAGCAGACCTTTGGGCCAGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GGCACTTCTGGGCACCCACATTGTCTCCTGCTCCAGAGGATATGGAAGGGTGGGACCCACATTGTCTCCTaGTCCAGAGGATATGGAAGG +
Preference number: 2 (lower is better)
Translates to: GTSGHPHCLLLQRIWKGGTHIVS*SRGYGR
Trigger: CCTTCCATATCCTCTGGAGCAGGAGACAATGTGGGT...CCCACCCTTCCATATCCTCTGGAGCAGGAGACAATGTGGGTGCCCAGAAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp CTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGATCCCTTCCTGTAGCTGTAGGCACTaGTGGTGGTCTTGCCAACAT +
Preference number: 2 (lower is better)
Translates to: LSTARKVERPRTTHLIPSCSCRH*WWSCQH
Trigger: ATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACA...GGAAGGGATCAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CCA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTACAGCTGGTGTTCACTaGTTGGCCCTCCAGCCGGCA +
Preference number: 2 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVATAGVH*LALQPA
Trigger: TGCCGGCTGGAGGGCCAACCAGTGAACACCAGCTGT...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCTCTAGGTCTGAATCATaGTCGTCCAGGATGAACATG +
Preference number: 2 (lower is better)
Translates to: AAPQGCIRHTATPPELIGSRSES*SSRMNM
Trigger: CATGTTCATCCTGGACGACCATGATTCAGACCTAGA...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR TCA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCTTGAGATGCAGAATTTaGAAGCAGCTGTCACCATCA +
Preference number: 2 (lower is better)
Translates to: AAPQGCIRHTATPPELIGLRCRI*KQLSPS
Trigger: TGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAA...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GAAGGAGGAACGGCTGAACTTTGGACAGCTGAGAGAAAAGCAGCATTGTTTCCAAACAGGAGAACGAGCTaGCGGGCTGCAGGCACGAGC +
Preference number: 2 (lower is better)
Translates to: EGGTAELWTAERKAALFPNRRTS*RAAGTS
Trigger: GCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTT...TGGAAACAATGCTGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp ATGAGGAGGCTGTGGTTGTCCCTCCTTATTCCTGCTGGATTTGCAGCCACGGCTCACTCAAGAGGCCACTaGCTCTCAGGAGTCCAGAAT +
Preference number: 2 (lower is better)
Translates to: MRRLWLSLLIPAGFAATAHSRGH*LSGVQN
Trigger: ATTCTGGACTCCTGAGAGGCAGTGGCCTCTTGAGTG...AGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACAGCCTCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCATTATACACTCCATTCTaGTTCTGCTGCAGGAGGGCG +
Preference number: 2 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPLYTPF*FCCRRA
Trigger: CGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAA...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CCA 90 bp AGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGAAGCTGAGTGAGGGGTaGGAAGGGAAGAAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: SSCHHHSCPQWSLLLSCQKLSEG*EGKKSP
Trigger: TGGGCTCTTCTTCCCTTCCCACCCCTCACTCAGCTT...CTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp TCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGCACTCATGTCCACAGTaGAGCTTGCTTCTGTCCTGT +
Preference number: 2 (lower is better)
Translates to: SLELSTARKVERPRTTHLHSCPQ*SLLLSC
Trigger: ACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTG...CAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp CCTAGGTTCAGATGGCATACACCGACAAGAGAAGGCAGAGACCATCCTTCGTGGATAGGGAGGCTGCCCTaGCCCAAAGGTCTGCTAATG +
Preference number: 2 (lower is better)
Translates to: PRFRWHTPTREGRDHPSWIGRLP*PKGLLM
Trigger: CATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTAT...CCACGAAGGATGGTCTCTGCCTTCTCTTGTCGGTGTATGCCATCTGAACCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp ATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCAGCGCAGGGCACTTCTaGGCACCCACATTGTCTCCT +
Preference number: 2 (lower is better)
Translates to: MQRTPFGLRTLSGLTWVTSAGHF*APTLSP
Trigger: AGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCT...GGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR CAA 90 bp AGGGAGGGGAAGGCCCACGGAAAACTGGCAACCCTGGGTCTCCGTTaGAGGCCAATATACTTTGTGTTCCTAGGTTCAGATGGCATACAC +
Preference number: 2 (lower is better)
Translates to: REGKAHGKLATLGLR*RPIYFVFLGSDGIH
Trigger: GTGTATGCCATCTGAACCTAGGAACACAAAGTATATTGGCCTCAAACGGAGACCCAGGGTTGCCAGTTTTCCGTGGGCCTTCCCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR TCA 90 bp AAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGGGAGGATTTATGGGCCAACTGTaGAAGGGACAAGTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: KLPSFLHRYCHQDGGKGGFMGQL*KGQVRL
Trigger: CAGCCTCACTTGTCCCTTTCACAGTTGGCCCATAAA...TCCTCCCTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR TCA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTAACAGAGACACTGCCTaGAAGCGCAGGGCACTTCTG +
Preference number: 2 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVANRDTA*KRRALL
Trigger: CAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTT...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATCTGGACAACAGTCCATaGTATCTAAGTTTCACCTTG +
Preference number: 2 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNLDNSP*YLSFTL
Trigger: CAAGGTGAAACTTAGATATCATGGACTGTTGTCCAG...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp CAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTCTCCTGTATGCAAGGGGAAAATaGAGCATTGAGGCTGGACAA +
Preference number: 2 (lower is better)
Translates to: QRHCLKAQGTSGHPHCLLYARGK*SIEAGQ
Trigger: TTGTCCAGCCTCAATGCTTCATTTTCCCCTTGCATA...CAGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp AAGTTTCACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGAGGGCCAATCAGATTaGGGGCTGTGTACTTCCAGG +
Preference number: 2 (lower is better)
Translates to: KFHLGKTETLPESAGHFWEGQSD*GLCTSR
Trigger: CCTGGAAGTACACAGCCCTCAATCTGATTGGCCCTC...CCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGTGAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565186.5
3UTR-3UTR GCA 90 bp ATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTGCACCACCCCGGCTTaGCCTGCCTTGAGATGCAGA +
Preference number: 2 (lower is better)
Translates to: MQNLKAAVTITHVHSGACCTTPA*PALRCR
Trigger: TCTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCA...GCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTTGTAGCTGTAGGCACTaGTGGTGGTCTTGCCAACAT +
Preference number: 2 (lower is better)
Translates to: GKQRHCLKAQGTSGHPHCCSCRH*WWSCQH
Trigger: ATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACA...ACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CCA 90 bp TGTAGCTCTGCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGGAGGATATGGAAGGGTaGGTGGAGGGAAACAAAGAG +
Preference number: 2 (lower is better)
Translates to: CSSALCWRVKPGIPAALWEDMEG*VEGNKE
Trigger: CTCTTTGTTTCCCTCCACCCACCCTTCCATATCCTC...CCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTCAAGGCCTTCACAGCTaGTGTTCACTGGTTGGCCCT +
Preference number: 2 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVAQGLHS*CSLVGP
Trigger: AGGGCCAACCAGTGAACACCAGCTGTGAAGGCCTTG...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp CTGCCCTGGCCCAAAGGTCTGCTAATGGCTTCTGCAGGGAGGATGAGGATGGTGCGGATTCCGTATTTCTaGCCAACACTCATCACTTCA +
Preference number: 2 (lower is better)
Translates to: LPWPKGLLMASAGRMRMVRIPYF*PTLITS
Trigger: TGAAGTGATGAGTGTTGGCCAGAAATACGGAATCCG...CACCATCCTCATCCTCCCTGCAGAAGCCATTAGCAGACCTTTGGGCCAGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564563.1
3UTR CAA 90 bp ACAAGGCAAACCCTTGGAAATGACACATGGATGAGGAGGCTGTGGTaGTCCCTCCTTATTCCTGCTGGATTTGCAGCCACGGCTCTGGAT +
Preference number: 2 (lower is better)
Translates to: TRQTLGNDTWMRRLW*SLLIPAGFAATALD
Trigger: ATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACAGCCTCCTCATCCATGTGTCATTTCCAAGGGTTTGCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR TCA 90 bp GGCACTTCTGGGCACCCACATTGTCTCCTGCTCCAGAGGATATGGAAGGGTGGGTTGAGATGCAGAATTTaGAAGCAGCTGTCACCATCA +
Preference number: 2 (lower is better)
Translates to: GTSGHPHCLLLQRIWKGGLRCRI*KQLSPS
Trigger: TGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAA...CCCACCCTTCCATATCCTCTGGAGCAGGAGACAATGTGGGTGCCCAGAAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp ATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCCGGCTTGCCCTGCCTTaGGATGCAGAATTTGAAAGC +
Preference number: 2 (lower is better)
Translates to: MQRTPFGLRTLSGLTWVTRLALP*DAEFES
Trigger: GCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCG...GGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp CTCGGAAAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGGGGAAAATGAAGCATTaGGGCTGGACAACAGTCCAT +
Preference number: 2 (lower is better)
Translates to: LGKLPSFLHRYCHQDGGKGKMKH*GWTTVH
Trigger: ATGGACTGTTGTCCAGCCTCAATGCTTCATTTTCCC...CTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTTTCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp AAGTTTCACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGTCAGACATACCTCCTaGCACCACGAGAAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: KFHLGKTETLPESAGHFWVRHTS*HHEKLS
Trigger: ACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGAC...CCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGTGAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GATGGTGCTAGGTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGGGAAAACAGAGACACTaGCTGAAAGCGCAGGGCACT +
Preference number: 2 (lower is better)
Translates to: DGARLTACLHYRPENVHAGKQRH*LKAQGT
Trigger: AGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC...CGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAACCTAGCACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GGAAAACTGGCAACCCTGGGTCTCCGTTTGAGGCCAATATACTTTGTGTTCCTAGGTAATGCCTGCATCTaGCCAAGGGCCTGTTCCTCC +
Preference number: 2 (lower is better)
Translates to: GKLATLGLRLRPIYFVFLGNACI*PRACSS
Trigger: GGAGGAACAGGCCCTTGGGCAGATGCAGGCATTACC...TAGGAACACAAAGTATATTGGCCTCAAACGGAGACCCAGGGTTGCCAGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp AAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGGGAGGAAGACAAGCAGTCTGTTaGTCAGAGGGGGAAACTGAT +
Preference number: 2 (lower is better)
Translates to: KLPSFLHRYCHQDGGKGGRQAVC*SEGETD
Trigger: ATCAGTTTCCCCCTCTGAGCAACAGACTGCTTGTCT...TCCTCCCTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp TTGTCCCTCCTTATTCCTGCTGGATTTGCAGCCACGGCTCTGGATCTGGGGCATAGCTCTGCTCTGTGCTaGAGAGTCAAACCTGGAATT +
Preference number: 2 (lower is better)
Translates to: LSLLIPAGFAATALDLGHSSALC*RVKPGI
Trigger: AATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCT...ATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp TTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGTCACAACAGAAGTCACACGTaGCCTGACGATGAAGGGGAG +
Preference number: 2 (lower is better)
Translates to: FNVGGQGSLEEREKYSGHNRSHT*PDDEGE
Trigger: CTCCCCTTCATCGTCAGGCCACGTGTGACTTCTGTT...GTGACCACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CAA 90 bp GAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTaGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: EFESSCHHHSCPQWS*LLSCQTYLLPPREA
Trigger: AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp TTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGTCACGACAGCAATGCAAGGTaGAAGGAGATCAAATGGCCC +
Preference number: 2 (lower is better)
Translates to: FNVGGQGSLEEREKYSGHDSNAR*KEIKWP
Trigger: GGGCCATTTGATCTCCTTTCACCTTGCATTGCTGTC...GTGACCACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp CCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACGTCAGACATACCTCCTaGCACCACGAGAAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: PCLEMQNLKAAVTITHVHVRHTS*HHEKLS
Trigger: ACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGAC...GTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp TGGCTTTGGAGGGGTGCAAATGCTACGTGTTTGGAAGAGCAGAGGAGGCCTGCACCAGAACTAATAGGCTaGTCCAAGAAAATGGAACCC +
Preference number: 2 (lower is better)
Translates to: WLWRGANATCLEEQRRPAPELIG*SKKMEP
Trigger: GGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGG...TGCAGGCCTCCTCTGCTCTTCCAAACACGTAGCATTTGCACCCCTCCAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCAGCTGCAGGCACGAGCTaGCCCTCAGGGCTGCATCCG +
Preference number: 2 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPAAGTS*PSGLHP
Trigger: CGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGC...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp GCTAGAACACCCTTCACTGAAAGAGCTTTCTACCCCACGCCCATTGTTCCGAAGTGTAGCTCTGCTCTGTaGTGGAGAGTCAAACCTGGA +
Preference number: 2 (lower is better)
Translates to: ARTPFTERAFYPTPIVPKCSSAL*WRVKPG
Trigger: TCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA...CTTCGGAACAATGGGCGTGGGGTAGAAAGCTCTTTCAGTGAAGGGTGTTCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR-3UTR GCA 90 bp ATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTGTAGCTCTGCTCTGTaGTGGAGAGTCAAACCTGGA +
Preference number: 2 (lower is better)
Translates to: MQRTPFGLRTLSGLTWVTCSSAL*WRVKPG
Trigger: TCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA...GGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCGGAAAACAGAGACACTaGCTGAAAGCGCAGGGCACT +
Preference number: 2 (lower is better)
Translates to: GKAVSSLMQRTPFGLRTLGKQRH*LKAQGT
Trigger: AGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC...GAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp TTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGTCACTATTCCTGCTGGATTTaGAGCCACGGCTCTGGATCT +
Preference number: 2 (lower is better)
Translates to: FNVGGQGSLEEREKYSGHYSCWI*SHGSGS
Trigger: AGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATA...GTGACCACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp ATCTCTTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGTGCTGGAGCCTGTCCTaGCATCATACAAGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: ISSMSGDRDPWKSVKNTVCWSLS*HHTRCC
Trigger: ACAGCACCTTGTATGATGGCAGGACAGGCTCCAGCA...CACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAAGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCACTTCATTGTATACATaGAGGGCGTACTCTATGGGG +
Preference number: 2 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGTSLYT*RAYSMG
Trigger: CCCCATAGAGTACGCCCTGCATGTATACAATGAAGT...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564563.1
3UTR-3UTR CCA 90 bp TGGCTTTGGAGGGGTGCAAATGCTACGTGTTTGGAAGAGCAGAGGAGGCCTGCATCAGACCCTTTTGACTaGGAAAAGCAACACACAAGG +
Preference number: 2 (lower is better)
Translates to: WLWRGANATCLEEQRRPASDPFD*EKQHTR
Trigger: CCTTGTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGA...TGCAGGCCTCCTCTGCTCTTCCAAACACGTAGCATTTGCACCCCTCCAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp TTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGTCACACTCAGAACTCTCAGTaGACTAACGTGGGTCACCTC +
Preference number: 2 (lower is better)
Translates to: FNVGGQGSLEEREKYSGHTQNSQ*TNVGHL
Trigger: GAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGT...GTGACCACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp GATGGTGCTAGGTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGGCAACGTACACCCTTTaGACTCAGAACTCTCAGTGG +
Preference number: 2 (lower is better)
Translates to: DGARLTACLHYRPENVHAATYTL*TQNSQW
Trigger: CCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGC...CGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAACCTAGCACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp TTTCAGGTTCTCAAAAAGTGGTGTAGACTCAGGCAAATGCCAGGAAATGTGTCCACAGCTGGTGTTCACTaGTTGGCCCTCCAGCCGGCA +
Preference number: 2 (lower is better)
Translates to: FQVLKKWCRLRQMPGNVSTAGVH*LALQPA
Trigger: TGCCGGCTGGAGGGCCAACCAGTGAACACCAGCTGT...GGACACATTTCCTGGCATTTGCCTGAGTCTACACCACTTTTTGAGAACCTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp ATCTCTTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGATCTGGGGCATCTACTaGCCTCCCCTGTTCACTCAA +
Preference number: 2 (lower is better)
Translates to: ISSMSGDRDPWKSVKNTVIWGIY*PPLFTQ
Trigger: TTGAGTGAACAGGGGAGGCCAGTAGATGCCCCAGAT...CACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAAGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR TCA 90 bp GCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGAACTCAGCATTGAGATGCAGAATTTaGAAGCAGCTGTCACCATCA +
Preference number: 2 (lower is better)
Translates to: ALCWRVKPGIPAALWNSALRCRI*KQLSPS
Trigger: TGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAA...TGCTGAGTTCCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp AAGTTTCACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGGGAAAATGAAGCATTaGGGCTGGACAACAGTCCAT +
Preference number: 2 (lower is better)
Translates to: KFHLGKTETLPESAGHFWGKMKH*GWTTVH
Trigger: ATGGACTGTTGTCCAGCCTCAATGCTTCATTTTCCC...CCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGTGAAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTGGGAAAATGAAGCATTaGGGCTGGACAACAGTCCAT +
Preference number: 2 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVAGKMKH*GWTTVH
Trigger: ATGGACTGTTGTCCAGCCTCAATGCTTCATTTTCCC...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCATTAGGGCAGTTGATATaGAAGGGGAAAATGAAGCAT +
Preference number: 2 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPLGQLI*KGKMKH
Trigger: ATGCTTCATTTTCCCCTTGCATATCAACTGCCCTAA...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp TTTCAGGTTCTCAAAAAGTGGTGTAGACTCAGGCAAATGCCAGGAAATGTGTCCAGAGCAGAGGAGGCCTaGAGCTCTCAGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: FQVLKKWCRLRQMPGNVSRAEEA*SSQSPV
Trigger: GACAGGTGACTGAGAGCTGCAGGCCTCCTCTGCTCT...GGACACATTTCCTGGCATTTGCCTGAGTCTACACCACTTTTTGAGAACCTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp ATCTCTTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGTGGTCAGGAAGTTATaGTGCCCTCTCCTCTTGAAC +
Preference number: 2 (lower is better)
Translates to: ISSMSGDRDPWKSVKNTVVVRKL*CPLLLN
Trigger: GTTCAAGAGGAGAGGGCAGCATAACTTCCTGACCAC...CACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAAGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp AGAAAAATTGTGCACAAAGCCCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTATCTCAATTCGGAGACTaGGAAGAGCGTAATACCCAG +
Preference number: 2 (lower is better)
Translates to: RKIVHKAQANVALQAVAVSQFGD*EERNTQ
Trigger: CTGGGTATTACGCTCTTCGCAGTCTCCGAATTGAGA...TACAGCTACAGCCTGGAGCGCCACGTTTGCCTGGGCTTTGTGCACAATTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564563.1
3UTR-3UTR CCA 90 bp CCCGGCTTGCCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTTCAGACCCTTTTGACTaGGAAAAGCAACACACAAGG +
Preference number: 2 (lower is better)
Translates to: PGLPCLEMQNLKAAVTITSDPFD*EKQHTR
Trigger: CCTTGTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGA...AGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp GCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGAACTCAGCAAGAAACATGACTTTATaGGCCAACTGTGAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: ALCWRVKPGIPAALWNSARNMTL*ANCERD
Trigger: GTCCCTTTCACAGTTGGCCCATAAAGTCATGTTTCT...TGCTGAGTTCCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp AGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTGAGGTAGATAATCATCCTGTGAGGCTGCCCTGGTaGCATCACTTCCCATGTAAG +
Preference number: 2 (lower is better)
Translates to: RPENVHAMPLISEVDNHPVRLPW*HHFPCK
Trigger: CTTACATGGGAAGTGATGCCACCAGGGCAGCCTCAC...AGGATGATTATCTACCTCACTGATAAGAGGCATCGCATGGACGTTCTCTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR TCA 90 bp ATCTCTTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGAAGGTCAGACCCTTTTaGCTGGGAAAAGCAACACAC +
Preference number: 2 (lower is better)
Translates to: ISSMSGDRDPWKSVKNTVKVRPF*LGKATH
Trigger: GTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGACCTT...CACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR TCA 90 bp AAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTTTTATGGGCCAACTGTaGAAGGGACAAGTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: KAVSSLMQRTPFGLRTLSFMGQL*KGQVRL
Trigger: CAGCCTCACTTGTCCCTTTCACAGTTGGCCCATAAA...ACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp GAGATGAAGAAAATTATAGGGAGGCTGCCCTGGCCCAAAGGTCTGCTAATGGCTATTCCAGGGGCGTGGTaGGGTTATTTATATCCTGAC +
Preference number: 2 (lower is better)
Translates to: EMKKIIGRLPWPKGLLMAIPGAW*GYLYPD
Trigger: GTCAGGATATAAATAACCTCACCACGCCCCTGGAAT...AGCCATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTATAATTTTCTTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564563.1
3UTR-3UTR GCA 90 bp GGAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTATGCACCACCCCGGCTTaGCCTGCCTTGAGATGCAGA +
Preference number: 2 (lower is better)
Translates to: GKATHKAIWFFPFKHCGLCTTPA*PALRCR
Trigger: TCTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCA...TAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp ACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTACAGGGAGAGGGACTCGTaGCCTGAGACCTGCACCACC +
Preference number: 2 (lower is better)
Translates to: THKAIWFFPFKHCGLLVYRERDS*PETCTT
Trigger: GGTGGTGCAGGTCTCAGGGCACGAGTCCCTCTCCCT...GTAAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GATGGTGCTAGGTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGCCAGAACTAATAGGCTaGTCCAAGAAAATGGAACCC +
Preference number: 2 (lower is better)
Translates to: DGARLTACLHYRPENVHAPELIG*SKKMEP
Trigger: GGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGG...CGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAACCTAGCACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACGCCAGAGGTATCGAGTaGCAGCCCACAGCACAGCAG +
Preference number: 2 (lower is better)
Translates to: EKQHTRQYGFSLSNTVAYARGIE*QPTAQQ
Trigger: CTGCTGTGCTGTGGGCTGGCACTCGATACCTCTGGC...GTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp AAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTTTATACACTCCATTCTaGTTCTGCTGCAGGAGGGCG +
Preference number: 2 (lower is better)
Translates to: KAVSSLMQRTPFGLRTLSLYTPF*FCCRRA
Trigger: CGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAA...ACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR GCA 90 bp AAGTTTCACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGTCCTCAGAAAAATTGTaGACAAAGCCCAGGCAAACG +
Preference number: 2 (lower is better)
Translates to: KFHLGKTETLPESAGHFWSSEKL*TKPRQT
Trigger: CGTTTGCCTGGGCTTTGTGCACAATTTTTCTGAGGA...CCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGTGAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CCA 90 bp GTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATCAAAGTCAAACGCACTaGGAGAAGGGGAAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: VNCLSPLQTRERPCDASYQSQTH*EKGKEE
Trigger: TTCCTCCTTCCCCTTCTCCCAGTGCGTTTGACTTTG...ATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp GAAGGAGGAACGGCTGAACTTTGGACAGCTGAGAGAAAAGCAGCATTGTTTCCAAGCTGTAGGCACTGCTaGTGGTCTTGCCAACATACT +
Preference number: 2 (lower is better)
Translates to: EGGTAELWTAERKAALFPSCRHC*WSCQHT
Trigger: AGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCT...TGGAAACAATGCTGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR TCA 90 bp ACCCAAAGTCACCCAGGATCTCTAGAAAAGATCCCACTTACTGAAGTGCCTCGGAAAGAAGACCCTTATTaGCTACACTGGCCAAGAAGC +
Preference number: 2 (lower is better)
Translates to: TQSHPGSLEKIPLTEVPRKEDPY*LHWPRS
Trigger: GCTTCTTGGCCAGTGTAGTCAATAAGGGTCTTCTTT...CCGAGGCACTTCAGTAAGTGGGATCTTTTCTAGAGATCCTGGGTGACTTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR-3UTR CCA 90 bp CTAAGGTCAGACCCTTTTGACTGGGAAAAGCAACACACAAGGCAATATGGTTTTAAGCTGAGTGAGGGGTaGGAAGGGAAGAAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: LRSDPFDWEKQHTRQYGFKLSEG*EGKKSP
Trigger: TGGGCTCTTCTTCCCTTCCCACCCCTCACTCAGCTT...AAAACCATATTGCCTTGTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGACCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp CAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGGAATATGGAAGGGTGGGTaGAGGGAAACAAAGAGCCTG +
Preference number: 2 (lower is better)
Translates to: QGRRLTFKCMQRQVIYCGIWKGG*RETKSL
Trigger: CAGGCTCTTTGTTTCCCTCCACCCACCCTTCCATAT...TCCACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp CAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGGACAAATGCTACGTGTTTaGAAGAGCAGAGGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: QGRRLTFKCMQRQVIYCGQMLRV*KSRGGL
Trigger: CAGGCCTCCTCTGCTCTTCCAAACACGTAGCATTTG...TCCACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR TCA 90 bp GAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACAACAGAGACACTGCCTaGAAGCGCAGGGCACTTCTG +
Preference number: 2 (lower is better)
Translates to: EKQHTRQYGFSLSNTVAYNRDTA*KRRALL
Trigger: CAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTT...GTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp TTTCAGGTTCTCAAAAAGTGGTGTAGACTCAGGCAAATGCCAGGAAATGTGTCCTGTCTCTGGCCTGAATaGGATCTCTTCAATGTCGGG +
Preference number: 2 (lower is better)
Translates to: FQVLKKWCRLRQMPGNVSCLWPE*DLFNVG
Trigger: CCCGACATTGAAGAGATCTCATTCAGGCCAGAGACA...GGACACATTTCCTGGCATTTGCCTGAGTCTACACCACTTTTTGAGAACCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp GAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACCACCCCGGCTTGCCCTaGCTTGAGATGCAGAATTTG +
Preference number: 2 (lower is better)
Translates to: EKQHTRQYGFSLSNTVAYHPGLP*LEMQNL
Trigger: CAAATTCTGCATCTCAAGGCAGGGCAAGCCGGGGTG...GTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp GAAGGAGGAACGGCTGAACTTTGGACAGCTGAGAGAAAAGCAGCATTGTTTCCACCAGAACTAATAGGCTaGTCCAAGAAAATGGAACCC +
Preference number: 2 (lower is better)
Translates to: EGGTAELWTAERKAALFPPELIG*SKKMEP
Trigger: GGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGG...TGGAAACAATGCTGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCCTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp TTTCAGGTTCTCAAAAAGTGGTGTAGACTCAGGCAAATGCCAGGAAATGTGTCCTGTAGCTCTGCTCTGTaGTGGAGAGTCAAACCTGGA +
Preference number: 2 (lower is better)
Translates to: FQVLKKWCRLRQMPGNVSCSSAL*WRVKPG
Trigger: TCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA...GGACACATTTCCTGGCATTTGCCTGAGTCTACACCACTTTTTGAGAACCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp TGGCAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTAGACAAGCAGTCTGTTaGTCAGAGGGGGAAACTGAT +
Preference number: 2 (lower is better)
Translates to: WQGRRLTFKCMQRQVIYCRQAVC*SEGETD
Trigger: ATCAGTTTCCCCCTCTGAGCAACAGACTGCTTGTCT...ACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp CACAGCTTGTATTTGAATGAACCAGGAGAGACTTCAAGGATCAACTCTAAAGTGAAGCTGAGTGAGGGGTaGGAAGGGAAGAAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: HSLYLNEPGETSRINSKVKLSEG*EGKKSP
Trigger: TGGGCTCTTCTTCCCTTCCCACCCCTCACTCAGCTT...CACTTTAGAGTTGATCCTTGAAGTCTCTCCTGGTTCATTCAAATACAAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp ACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTACATTCCGGCAGCTCTCTaGAACTCAGCACAGCCCGCA +
Preference number: 2 (lower is better)
Translates to: THKAIWFFPFKHCGLLVYIPAAL*NSAQPA
Trigger: TGCGGGCTGTGCTGAGTTCCAGAGAGCTGCCGGAAT...GTAAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp AACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATCAGATGCCTGATCCCCAGTaGATGTTATCTCAAACTTTG +
Preference number: 2 (lower is better)
Translates to: NCLSPLQTRERPCDASYQMPDPQ*MLSQTL
Trigger: CAAAGTTTGAGATAACATCCACTGGGGATCAGGCAT...CTGATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565186.5
3UTR-3UTR CCA 90 bp GGAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTAGTGAGGCTGCCCTGGTaGCATCACTTCCCATGTAAG +
Preference number: 2 (lower is better)
Translates to: GKATHKAIWFFPFKHCGLVRLPW*HHFPCK
Trigger: CTTACATGGGAAGTGATGCCACCAGGGCAGCCTCAC...TAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CCA 90 bp CAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTGAGGTGAGGCTGCCCTaGTGGCATCACTTCCCATGT +
Preference number: 2 (lower is better)
Translates to: QHTRQYGFSLSNTVAYLFEVRLP*WHHFPC
Trigger: ACATGGGAAGTGATGCCACCAGGGCAGCCTCACCTC...AAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR TCA 90 bp AAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTCTGGACAACAGTCCATaGTATCTAAGTTTCACCTTG +
Preference number: 2 (lower is better)
Translates to: KAVSSLMQRTPFGLRTLSLDNSP*YLSFTL
Trigger: CAAGGTGAAACTTAGATATCATGGACTGTTGTCCAG...ACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp TGGCAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGAAGGAACATCTTCCTaGTGCAAGCTTAGATGGAAG +
Preference number: 2 (lower is better)
Translates to: WQGRRLTFKCMQRQVIYCEGTSS*CKLRWK
Trigger: CTTCCATCTAAGCTTGCATCAGGAAGATGTTCCTTC...ACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp TTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGTCACCTGAGCATTTTAAGCTaGTCTAATGAAATGGAAGGA +
Preference number: 2 (lower is better)
Translates to: FNVGGQGSLEEREKYSGHLSILS*SNEMEG
Trigger: TCCTTCCATTTCATTAGAGCAGCTTAAAATGCTCAG...GTGACCACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp TCTTCAGAGTTCCTGAATGAGAGCTTTTCTGGCTTCAGTACCAATGATCACAGAACTCAGAACTCTCAGTaGACTAACGTGGGTCACCTC +
Preference number: 2 (lower is better)
Translates to: SSEFLNESFSGFSTNDHRTQNSQ*TNVGHL
Trigger: GAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGT...TCTGTGATCATTGGTACTGAAGCCAGAAAAGCTCTCATTCAGGAACTCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp ACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTACGTCAGACATACCTCCTaGCACCACGAGAAGCTGAGT +
Preference number: 2 (lower is better)
Translates to: THKAIWFFPFKHCGLLVYVRHTS*HHEKLS
Trigger: ACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGAC...GTAAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp GAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACGCAACGTACACCCTTTaGACTCAGAACTCTCAGTGG +
Preference number: 2 (lower is better)
Translates to: EKQHTRQYGFSLSNTVAYATYTL*TQNSQW
Trigger: CCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGC...GTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp AAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTTGTAGGCACTGCTGGTaGTCTTGCCAACATACTGCC +
Preference number: 2 (lower is better)
Translates to: KATHKAIWFFPFKHCGLLCRHCW*SCQHTA
Trigger: GGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACA...AAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CCA 90 bp CAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTCAAAGTCAAACGCACTaGGAGAAGGGGAAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: QHTRQYGFSLSNTVAYLFQSQTH*EKGKEE
Trigger: TTCCTCCTTCCCCTTCTCCCAGTGCGTTTGACTTTG...AAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp ACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTACAAGGTCAGACCCTTTTaGCTGGGAAAAGCAACACAC +
Preference number: 2 (lower is better)
Translates to: THKAIWFFPFKHCGLLVYKVRPF*LGKATH
Trigger: GTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGACCTT...GTAAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR TCA 90 bp TCTAAAGTGCTAGAAGAGAAATCTGTGTTTGGGGCACTGAATAAACAAGTGATGAAGGTCAGACCCTTTTaGCTGGGAAAAGCAACACAC +
Preference number: 2 (lower is better)
Translates to: SKVLEEKSVFGALNKQVMKVRPF*LGKATH
Trigger: GTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGACCTT...CATCACTTGTTTATTCAGTGCCCCAAACACAGATTTCTCTTCTAGCACTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR TCA 90 bp TCTAAAGTGCTAGAAGAGAAATCTGTGTTTGGGGCACTGAATAAACAAGTGATGCTCAGAGGGGGAAACTaGTGTCATTTAACAGGAGGT +
Preference number: 2 (lower is better)
Translates to: SKVLEEKSVFGALNKQVMLRGGN*CHLTGG
Trigger: ACCTCCTGTTAAATGACATCAGTTTCCCCCTCTGAG...CATCACTTGTTTATTCAGTGCCCCAAACACAGATTTCTCTTCTAGCACTTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR GCA 90 bp AACAGGAGGTCAGGATTTCTGGTTCTACTTCAACAAACAGTGCATAATTTTGGAATGGCTTTGGAGGGGTaGAAATGCTACGTGTTTGGA +
Preference number: 2 (lower is better)
Translates to: NRRSGFLVLLQQTVHNFGMALEG*KCYVFG
Trigger: TCCAAACACGTAGCATTTGCACCCCTCCAAAGCCAT...TCCAAAATTATGCACTGTTTGTTGAAGTAGAACCAGAAATCCTGACCTCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCAGGAACGGCTGAACTTTaGACAGCTGAGAGAAAAGCA +
Preference number: 2 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPGTAEL*TAERKA
Trigger: TGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCC...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CCA 90 bp GAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACAGAAACATGACTTTATaGGCCAACTGTGAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: EKQHTRQYGFSLSNTVAYRNMTL*ANCERD
Trigger: GTCCCTTTCACAGTTGGCCCATAAAGTCATGTTTCT...GTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CCA 90 bp AAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTTCTAGGTCTGAATCATaGTCGTCCAGGATGAACATG +
Preference number: 2 (lower is better)
Translates to: KATHKAIWFFPFKHCGLLSRSES*SSRMNM
Trigger: CATGTTCATCCTGGACGACCATGATTCAGACCTAGA...AAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR GCA 90 bp AAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTTTAGGGCAGTTGATATaGAAGGGGAAAATGAAGCAT +
Preference number: 2 (lower is better)
Translates to: KATHKAIWFFPFKHCGLLLGQLI*KGKMKH
Trigger: ATGCTTCATTTTCCCCTTGCATATCAACTGCCCTAA...AAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR GCA 90 bp ACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTACCTGAGCATTTTAAGCTaGTCTAATGAAATGGAAGGA +
Preference number: 2 (lower is better)
Translates to: THKAIWFFPFKHCGLLVYLSILS*SNEMEG
Trigger: TCCTTCCATTTCATTAGAGCAGCTTAAAATGCTCAG...GTAAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 72 bp AACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTaGCCCTCAGGGCTGCATCCGACACACGGCAACCCC +
Preference number: 3 (lower is better)
Translates to: NRRTSCRAAGTS*PSGLHPTHGNP
Trigger: GGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR GCA 72 bp TGGAACCCAAGGGAGAGGGACTCGTGCCCTGAGACCTaGACCACCCCGGCTTGCCCTGCCTTGAGATGCAGA +
Preference number: 3 (lower is better)
Translates to: WNPRERDSCPET*TTPACPALRCR
Trigger: TCTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR CCA 72 bp AGGCCAGTGGGCCTCCCAGTGAGAACCAAACAGGAGTaGCCAGGCTCCACTCCTGGGGCCAGAGTGAAACCG +
Preference number: 3 (lower is better)
Translates to: RPVGLPVRTKQE*PGSTPGARVKP
Trigger: CGGTTTCACTCTGGCCCCAGGAGTGGAGCCTGGCCACTCCTGTTTGGTTCTCACTGGGAGGCCCACTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CAA 90 bp CTGCCCTGGCCCAAAGGTCTGCTAATGGCTTCTGCAGGGAGGATGAGGATGGTGGCACAGCCCGCAAGGTaGAAAGGCCCAGGACAACAC +
Preference number: 3 (lower is better)
Translates to: LPWPKGLLMASAGRMRMVAQPAR*KGPGQH
Trigger: GTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGC...CACCATCCTCATCCTCCCTGCAGAAGCCATTAGCAGACCTTTGGGCCAGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR GCA 72 bp GAGGTAAGTCTGCTCCCTGCTGGTAATGCCTGCATCTaGCCAAGGGCCTGTTCCTCCTCTCCCAAGGCCTTC +
Preference number: 3 (lower is better)
Translates to: EVSLLPAGNACI*PRACSSSPKAF
Trigger: GAAGGCCTTGGGAGAGGAGGAACAGGCCCTTGGGCAGATGCAGGCATTACCAGCAGGGAGCAGACTTACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 72 bp GGCAAACGTGGCGCTCCAGGCTGTAGCTGTAGGCACTaGTGGTGGTCTTGCCAACATACTGCCCATTCCGGT +
Preference number: 3 (lower is better)
Translates to: GKRGAPGCSCRH*WWSCQHTAHSG
Trigger: ACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGCGCCACGTTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR CCA 72 bp GATTTGCAGCCACGGCTCTGGATCTGGGGCATCTACTaGCCTCCCCTGTTCACTCAAGAGGCCACTGCCTCT +
Preference number: 3 (lower is better)
Translates to: DLQPRLWIWGIY*PPLFTQEATAS
Trigger: AGAGGCAGTGGCCTCTTGAGTGAACAGGGGAGGCCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CAA 90 bp AGCCCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTAGGCACTGCTGGTGGTCTTGTCCACAGTGGAGCTaGCTTCTGTCCTGTCAGACA +
Preference number: 3 (lower is better)
Translates to: SPGKRGAPGCSCRHCWWSCPQWS*LLSCQT
Trigger: TGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACA...AGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGCGCCACGTTTGCCTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CAA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGTCCACAGTGGAGCTaGCTTCTGTCCTGTCAGACA +
Preference number: 3 (lower is better)
Translates to: AAPQGCIRHTATPPELIGCPQWS*LLSCQT
Trigger: TGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACA...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp CCTAGGTTCAGATGGCATACACCGACAAGAGAAGGCAGAGACCATCCTTCGTGGCTGCACCACCCCGGCTaGCCCTGCCTTGAGATGCAG +
Preference number: 3 (lower is better)
Translates to: PRFRWHTPTREGRDHPSWLHHPG*PCLEMQ
Trigger: CTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCAG...CCACGAAGGATGGTCTCTGCCTTCTCTTGTCGGTGTATGCCATCTGAACCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CAA 90 bp GATGGTGCTAGGTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGCTGCACCACCCCGGCTaGCCCTGCCTTGAGATGCAG +
Preference number: 3 (lower is better)
Translates to: DGARLTACLHYRPENVHALHHPG*PCLEMQ
Trigger: CTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCAG...CGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAACCTAGCACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp TTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGTCACCTGCACCACCCCGGCTaGCCCTGCCTTGAGATGCAG +
Preference number: 3 (lower is better)
Translates to: FNVGGQGSLEEREKYSGHLHHPG*PCLEMQ
Trigger: CTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCAG...GTGACCACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 72 bp GAGGCTGTGGTTGTCCCTCCTTATTCCTGCTGGATTTaGAGCCACGGCTCTGGATCTGGGGCATCTACTGGC +
Preference number: 3 (lower is better)
Translates to: EAVVVPPYSCWI*SHGSGSGASTG
Trigger: GCCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 72 bp CCCCACGCCCATTGTTCCGAAGAAGGAGAGGCTATGTaGGGCGGATGGGAACCCACACACCGAGATGAACTT +
Preference number: 3 (lower is better)
Translates to: PHAHCSEEGEAM*GGWEPTHRDEL
Trigger: AAGTTCATCTCGGTGTGTGGGTTCCCATCCGCCCCACATAGCCTCTCCTTCTTCGGAACAATGGGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR CCA 72 bp CGTGGCGCTCCAGGCTGTAGCTGTAGGCACTGCTGGTaGTCTTGCCAACATACTGCCCATTCCGGTAAATGG +
Preference number: 3 (lower is better)
Translates to: RGAPGCSCRHCW*SCQHTAHSGKW
Trigger: CCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGCGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CAA 90 bp TCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGCGAGGGCCAATCAGATaGAGGGCTGTGTACTTCCAG +
Preference number: 3 (lower is better)
Translates to: SLELSTARKVERPRTTHLRGPIR*RAVYFQ
Trigger: CTGGAAGTACACAGCCCTCAATCTGATTGGCCCTCG...CAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565186.5
3UTR GCA 72 bp ATGGATGAGGAGGCTGTGGTTGTCCCTCCTTATTCCTaGTGGATTTGCAGCCACGGCTCTGGATCTGGGGCA +
Preference number: 3 (lower is better)
Translates to: MDEEAVVVPPYS*WICSHGSGSGA
Trigger: TGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACAGCCTCCTCATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 72 bp GCTCCAGGCTGTAGCTGTAGGCACTGCTGGTGGTCTTaGCAACATACTGCCCATTCCGGTAAATGGGCTCTC +
Preference number: 3 (lower is better)
Translates to: APGCSCRHCWWS*QHTAHSGKWAL
Trigger: GAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR CCA 72 bp TGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTaGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCA +
Preference number: 3 (lower is better)
Translates to: CWRVKPGIPAAL*NSAQPARLKGP
Trigger: TGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR CCA 72 bp GATGAGGAGGCTGTGGTTGTCCCTCCTTATTCCTGCTaGATTTGCAGCCACGGCTCTGGATCTGGGGCATCT +
Preference number: 3 (lower is better)
Translates to: DEEAVVVPPYSC*ICSHGSGSGAS
Trigger: AGATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACAGCCTCCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 72 bp AATGGAGGAGCCTTACAACTCAGCACCTTAAATTGTTaGCCTGAAGTGGTGGCGGGGAGGGAGGCGCTGACG +
Preference number: 3 (lower is better)
Translates to: NGGALQLSTLNC*PEVVAGREALT
Trigger: CGTCAGCGCCTCCCTCCCCGCCACCACTTCAGGCCAACAATTTAAGGTGCTGAGTTGTAAGGCTCCTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR-3UTR CAA 90 bp CCCGGCTTGCCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTATCTGCTGTCACCACTaGCTCTTCCCCCGTGTCCTC +
Preference number: 3 (lower is better)
Translates to: PGLPCLEMQNLKAAVTITICCHH*LFPRVL
Trigger: GAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGAT...AGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR TCA 72 bp CCACTGCCTCTCAGGAGTCCAGAATGCTCTGATATCTaGCACCGGTGGTCAGGAAGTTATGCTGCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: PLPLRSPECSDI*HRWSGSYAALS
Trigger: GGAGAGGGCAGCATAACTTCCTGACCACCGGTGTCAGATATCAGAGCATTCTGGACTCCTGAGAGGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 72 bp CACTGGGCTATGTGGTCTCTGTGTCTCTGGCCTGAATaGGATCTCTTCAATGTCGGGGGACAGGGATCCCTG +
Preference number: 3 (lower is better)
Translates to: HWAMWSLCLWPE*DLFNVGGQGSL
Trigger: CAGGGATCCCTGTCCCCCGACATTGAAGAGATCTCATTCAGGCCAGAGACACAGAGACCACATAGCCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 72 bp AGCAAGCAGGTAAAACTCCGGGTGTGCATGAGGAGATaGTCCAAGGCCAGTGGGCCTCCCAGTGAGAACCAA +
Preference number: 3 (lower is better)
Translates to: SKQVKLRVCMRR*SKASGPPSENQ
Trigger: TTGGTTCTCACTGGGAGGCCCACTGGCCTTGGATCATCTCCTCATGCACACCCGGAGTTTTACCTGCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 72 bp TGCACAGTGTTAGTGCCACATTCACAGGGGCAGAAATaGTCGGTCACCCTGTGCACCCAAAGTCACCCAGGA +
Preference number: 3 (lower is better)
Translates to: CTVLVPHSQGQK*SVTLCTQSHPG
Trigger: TCCTGGGTGACTTTGGGTGCACAGGGTGACCGAGCATTTCTGCCCCTGTGAATGTGGCACTAACACTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR CCA 72 bp TTATTCCTGCTGGATTTGCAGCCACGGCTCTGGATCTaGGGCATCTACTGGCCTCCCCTGTTCACTCAAGAG +
Preference number: 3 (lower is better)
Translates to: LFLLDLQPRLWI*GIYWPPLFTQE
Trigger: CTCTTGAGTGAACAGGGGAGGCCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 72 bp TGGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATaGGCTCTCCCCACCAAGGCCAAAGGTCTAGGTCTG +
Preference number: 3 (lower is better)
Translates to: WWSCQHTAHSGK*ALPTKAKGLGL
Trigger: CAGACCTAGACCTTTGGCCTTGGTGGGGAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR CCA 72 bp AAACGTGGCGCTCCAGGCTGTAGCTGTAGGCACTGCTaGTGGTCTTGCCAACATACTGCCCATTCCGGTAAA +
Preference number: 3 (lower is better)
Translates to: KRGAPGCSCRHC*WSCQHTAHSGK
Trigger: TTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGCGCCACGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CAA 90 bp CAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTTGTCCACAGTGGAGCTaGCTTCTGTCCTGTCAGACA +
Preference number: 3 (lower is better)
Translates to: QWSLLLSCQTYLLPPREACPQWS*LLSCQT
Trigger: TGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACA...AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
3UTR TCA 72 bp ACCACCCCGGCTTGCCCTGCCTTGAGATGCAGAATTTaGAAGCAGCTGTCACCATCACTCATGTCCACAGTG +
Preference number: 3 (lower is better)
Translates to: TTPACPALRCRI*KQLSPSLMSTV
Trigger: CACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR GCA 72 bp GAGGTAGATAATCATCCTCTTGCCAGAGGTATCGAGTaGCAGCCCACAGCACAGCAGAACAGGAGAACGAGC +
Preference number: 3 (lower is better)
Translates to: EVDNHPLARGIE*QPTAQQNRRTS
Trigger: GCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCTGGCACTCGATACCTCTGGCAAGAGGATGATTATCTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR GCA 72 bp ATGGTGAGGCGTTTATACACTCCATTCTGCTTCTGCTaGAGGAGGGCGTCGCGACCAATGAAATCCATGCCC +
Preference number: 3 (lower is better)
Translates to: MVRRLYTPFCFC*RRASRPMKSMP
Trigger: GGGCATGGATTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAAACGCCTCACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CAA 90 bp CTGCCCTGGCCCAAAGGTCTGCTAATGGCTTCTGCAGGGAGGATGAGGATGGTGCTTGAGATGCAGAATTaGAAAGCAGCTGTCACCATC +
Preference number: 3 (lower is better)
Translates to: LPWPKGLLMASAGRMRMVLEMQN*KAAVTI
Trigger: GATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAG...CACCATCCTCATCCTCCCTGCAGAAGCCATTAGCAGACCTTTGGGCCAGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTGCACTGCTGGTGGTCTaGCCAACATACTGCCCATTC +
Preference number: 3 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVAALLVV*PTYCPF
Trigger: GAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGC...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR TCA 72 bp CTGCTGGAGCCTGTCCTGCCATCATACAAGGTGCTGTaGCAGCAATGCAAGGTGAAAGGAGATCAAATGGCC +
Preference number: 3 (lower is better)
Translates to: LLEPVLPSYKVL*QQCKVKGDQMA
Trigger: GGCCATTTGATCTCCTTTCACCTTGCATTGCTGTCACAGCACCTTGTATGATGGCAGGACAGGCTCCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 72 bp CTTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTaGAAAATACAGTGGTCACTGTGCAGTTCTCTCTGC +
Preference number: 3 (lower is better)
Translates to: LQCRGTGIPGRA*KIQWSLCSSLC
Trigger: GCAGAGAGAACTGCACAGTGACCACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 72 bp CATTCTGCTTCTGCTGCAGGAGGGCGTCGCGACCAATaGAATCCATGCCCTTCTCTAATTTCACCCGAGACT +
Preference number: 3 (lower is better)
Translates to: HSASAAGGRRDQ*NPCPSLISPET
Trigger: AGTCTCGGGTGAAATTAGAGAAGGGCATGGATTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564563.1
3UTR GCA 72 bp CCACATTCACAGGGGCAGAAATGCTCGGTCACCCTGTaGACCCAAAGTCACCCAGGATCTCTAGAAAAGATC +
Preference number: 3 (lower is better)
Translates to: PHSQGQKCSVTL*TQSHPGSLEKI
Trigger: GATCTTTTCTAGAGATCCTGGGTGACTTTGGGTGCACAGGGTGACCGAGCATTTCTGCCCCTGTGAATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR-3UTR CAA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCAACACTGTGGCTTACTaGTTTACTCAACTAAGAAAG +
Preference number: 3 (lower is better)
Translates to: AAPQGCIRHTATPPELIGNTVAY*FTQLRK
Trigger: CTTTCTTAGTTGAGTAAACAAGTAAGCCACAGTGTT...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTCCCACACTCATCTCCTaGCAAAAGAGGCTTGGGAAG +
Preference number: 3 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVAPTLIS*QKRLGK
Trigger: CTTCCCAAGCCTCTTTTGCAAGGAGATGAGTGTGGG...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565186.5
3UTR-3UTR CAA 90 bp GAGATGAAGAAAATTATAGGGAGGCTGCCCTGGCCCAAAGGTCTGCTAATGGCTTGTCCACAGTGGAGCTaGCTTCTGTCCTGTCAGACA +
Preference number: 3 (lower is better)
Translates to: EMKKIIGRLPWPKGLLMACPQWS*LLSCQT
Trigger: TGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACA...AGCCATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTATAATTTTCTTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp CCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACTGTCCACAGTGGAGCTaGCTTCTGTCCTGTCAGACA +
Preference number: 3 (lower is better)
Translates to: PCLEMQNLKAAVTITHVHCPQWS*LLSCQT
Trigger: TGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACA...GTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp TCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGTATCTAAGTTTCACCTaGGGAAAACAGAGACACTGC +
Preference number: 3 (lower is better)
Translates to: SLELSTARKVERPRTTHLYLSFT*GKQRHC
Trigger: GCAGTGTCTCTGTTTTCCCAAGGTGAAACTTAGATA...CAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCATATCTAAGTTTCACCTaGGGAAAACAGAGACACTGC +
Preference number: 3 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPYLSFT*GKQRHC
Trigger: GCAGTGTCTCTGTTTTCCCAAGGTGAAACTTAGATA...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp TGTAGCTCTGCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGGTCAGATTAGGGCAGTaGATATGCAAGGGGAAAATG +
Preference number: 3 (lower is better)
Translates to: CSSALCWRVKPGIPAALWVRLGQ*ICKGKM
Trigger: CATTTTCCCCTTGCATATCAACTGCCCTAATCTGAC...CCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp ATCTCTTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGCAAATGCTACGTGTTaGGAAGAGCAGAGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: ISSMSGDRDPWKSVKNTVANATC*EEQRRP
Trigger: AGGCCTCCTCTGCTCTTCCAAACACGTAGCATTTGC...CACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAAGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 72 bp CAGAATGAGCTGAGACACAAGGCAAACCCTTGGAAATaGCACATGGATGAGGAGGCTGTGGTTGTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: QNELRHKANPWK*HMDEEAVVVPP
Trigger: AGGAGGGACAACCACAGCCTCCTCATCCATGTGTCATTTCCAAGGGTTTGCCTTGTGTCTCAGCTCATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 72 bp TCACCCGAGACTCTCGTCCACATTCCAGGGGCGTGGTaGGGTTATTTATATCCTGACCCCAGAAGGCAAAAA +
Preference number: 3 (lower is better)
Translates to: SPETLVHIPGAW*GYLYPDPRRQK
Trigger: TTTTTGCCTTCTGGGGTCAGGATATAAATAACCTCACCACGCCCCTGGAATGTGGACGAGAGTCTCGGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564563.1
3UTR GCA 72 bp CCAAGACGGTGGCAAGGGAGGAGGCTAACTTTCAAATaGATGCAACGGCAGGTAATATACTGTGGAAGCTGG +
Preference number: 3 (lower is better)
Translates to: PRRWQGRRLTFK*MQRQVIYCGSW
Trigger: CCAGCTTCCACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTGCCACCGTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 72 bp AACATGGTGAGGCGTTTATACACTCCATTCTGCTTCTaGTGCAGGAGGGCGTCGCGACCAATGAAATCCATG +
Preference number: 3 (lower is better)
Translates to: NMVRRLYTPFCF*CRRASRPMKSM
Trigger: CATGGATTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAAACGCCTCACCATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR GCA 72 bp AGGATGAACATGGTGAGGCGTTTATACACTCCATTCTaGTTCTGCTGCAGGAGGGCGTCGCGACCAATGAAA +
Preference number: 3 (lower is better)
Translates to: RMNMVRRLYTPF*FCCRRASRPMK
Trigger: TTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAAACGCCTCACCATGTTCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR GCA 72 bp GATGTCAATCTCATACTCTCCCCGGTTGATGAAATCTaGTGTCACCACTTGCTCTTCCCCCGTGTCCTCAGA +
Preference number: 3 (lower is better)
Translates to: DVNLILSPVDEI*CHHLLFPRVLR
Trigger: TCTGAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGATTTCATCAACCGGGGAGAGTATGAGATTGACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR CCA 72 bp TATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTaGACTAACGTGGGTCACCTCTGTGTAGCTCTGCTC +
Preference number: 3 (lower is better)
Translates to: YATYTLWTQNSQ*TNVGHLCVALL
Trigger: GAGCAGAGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR CCA 72 bp CCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTaGCAAGGGAGGAGGCTAACTTTCAAATGCATGCAA +
Preference number: 3 (lower is better)
Translates to: PIILASLLPPRR*QGRRLTFKCMQ
Trigger: TTGCATGCATTTGAAAGTTAGCCTCCTCCCTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 72 bp CGCCAGGCCAGTCTTCTAGTGCCAATATGGAGACTGTaGGCCACAGAAGATTCCCTTCTATTTCAGGTTCTC +
Preference number: 3 (lower is better)
Translates to: RQASLLVPIWRL*ATEDSLLFQVL
Trigger: GAGAACCTGAAATAGAAGGGAATCTTCTGTGGCCCACAGTCTCCATATTGGCACTAGAAGACTGGCCTGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 72 bp CATTGTTCCGAAGAAGGAGAGGCTATGTGGGGCGGATaGGAACCCACACACCGAGATGAACTTTTCTCTTTC +
Preference number: 3 (lower is better)
Translates to: HCSEEGEAMWGG*EPTHRDELFSF
Trigger: GAAAGAGAAAAGTTCATCTCGGTGTGTGGGTTCCCATCCGCCCCACATAGCCTCTCCTTCTTCGGAACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR CCA 72 bp TCTCCCCACCAAGGCCAAAGGTCTAGGTCTGAATCATaGTCGTCCAGGATGAACATGGTGAGGCGTTTATAC +
Preference number: 3 (lower is better)
Translates to: SPHQGQRSRSES*SSRMNMVRRLY
Trigger: GTATAAACGCCTCACCATGTTCATCCTGGACGACCATGATTCAGACCTAGACCTTTGGCCTTGGTGGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR-3UTR CAA 90 bp ATGAGGAGGCTGTGGTTGTCCCTCCTTATTCCTGCTGGATTTGCAGCCACGGCTTCACACAGCTTGTATTaGAATGAACCAGGAGAGACT +
Preference number: 3 (lower is better)
Translates to: MRRLWLSLLIPAGFAATASHSLY*NEPGET
Trigger: AGTCTCTCCTGGTTCATTCAAATACAAGCTGTGTGA...AGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACAGCCTCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 72 bp TTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTaGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTG +
Preference number: 3 (lower is better)
Translates to: FESSCHHHSCPQ*SLLLSCQTYLL
Trigger: CAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp GTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATTGCAACGTACACCCTTaGGACTCAGAACTCTCAGTG +
Preference number: 3 (lower is better)
Translates to: VNCLSPLQTRERPCDASYCNVHP*DSELSV
Trigger: CACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCA...ATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp CCCGGCTTGCCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTTATCTAAGTTTCACCTaGGGAAAACAGAGACACTGC +
Preference number: 3 (lower is better)
Translates to: PGLPCLEMQNLKAAVTITYLSFT*GKQRHC
Trigger: GCAGTGTCTCTGTTTTCCCAAGGTGAAACTTAGATA...AGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp AAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTTCATACTCTCCCCGGTaGATGAAATCTGCTGTCACC +
Preference number: 3 (lower is better)
Translates to: KAVSSLMQRTPFGLRTLSSYSPR*MKSAVT
Trigger: GGTGACAGCAGATTTCATCAACCGGGGAGAGTATGA...ACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
3UTR TCA 72 bp ATCTCTAGGGACAGAAGACAAACGTGCTGCCCAGAATaGGCTGAGACACAAGGCAAACCCTTGGAAATGACA +
Preference number: 3 (lower is better)
Translates to: ISRDRRQTCCPE*AETQGKPLEMT
Trigger: TGTCATTTCCAAGGGTTTGCCTTGTGTCTCAGCTCATTCTGGGCAGCACGTTTGTCTTCTGTCCCTAGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 72 bp ACACCGACAAGAGAAGGCAGAGACCATCCTTCGTGGTaGGCACAAAATGCTATGACAGGTAATTGCAGAGAG +
Preference number: 3 (lower is better)
Translates to: TPTREGRDHPSW*AQNAMTGNCRE
Trigger: CTCTCTGCAATTACCTGTCATAGCATTTTGTGCTCACCACGAAGGATGGTCTCTGCCTTCTCTTGTCGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 72 bp GAAGTTATGCTGCCCTCTCCTCTTGAACAGCTAAGATaGTTGGACACTAGACAGAGGCAAAGCAGTTATGCC +
Preference number: 3 (lower is better)
Translates to: EVMLPSPLEQLR*LDTRQRQSSYA
Trigger: GGCATAACTGCTTTGCCTCTGTCTAGTGTCCAAGCATCTTAGCTGTTCAAGAGGAGAGGGCAGCATAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 72 bp AAATTCCTCCGCCAGGCCAGTCTTCTAGTGCCAATATaGAGACTGTGGGCCACAGAAGATTCCCTTCTATTT +
Preference number: 3 (lower is better)
Translates to: KFLRQASLLVPI*RLWATEDSLLF
Trigger: AAATAGAAGGGAATCTTCTGTGGCCCACAGTCTCCATATTGGCACTAGAAGACTGGCCTGGCGGAGGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CAA 90 bp ACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTACGCACAGCCCGCAAGGTaGAAAGGCCCAGGACAACAC +
Preference number: 3 (lower is better)
Translates to: THKAIWFFPFKHCGLLVYAQPAR*KGPGQH
Trigger: GTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGC...GTAAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp ATCTCTTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGCCAGACTCACACAGCTaGTATTTGAATGAACCAGGA +
Preference number: 3 (lower is better)
Translates to: ISSMSGDRDPWKSVKNTVPDSHS*YLNEPG
Trigger: TCCTGGTTCATTCAAATACAAGCTGTGTGAGTCTGG...CACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAAGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 72 bp AGCAAGACAAGCAGTCTGTTGCTCAGAGGGGGAAACTaGTGTCATTTAACAGGAGGTCAGGATTTCTGGTTC +
Preference number: 3 (lower is better)
Translates to: SKTSSLLLRGGN*CHLTGGQDFWF
Trigger: GAACCAGAAATCCTGACCTCCTGTTAAATGACATCAGTTTCCCCCTCTGAGCAACAGACTGCTTGTCTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 72 bp AACAGAGATATAAAGCTGAATCTTGTAGCTAACCCCTaGAAGCAAGCCAACGCAAATTCCTCCGCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: NRDIKLNLVANP*KQANANSSARP
Trigger: TGGCCTGGCGGAGGAATTTGCGTTGGCTTGCTTTCAGGGGTTAGCTACAAGATTCAGCTTTATATCTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR GCA 72 bp AATACGTTTTCCTTTACAAAGATGGCTTTGGAGGGGTaGAAATGCTACGTGTTTGGAAGAGCAGAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: NTFSFTKMALEG*KCYVFGRAEEA
Trigger: GGCCTCCTCTGCTCTTCCAAACACGTAGCATTTGCACCCCTCCAAAGCCATCTTTGTAAAGGAAAACGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 72 bp AATGACCCTGGCAGTGCTAAGAACAGAAGTCACACGTaGCCTGACGATGAAGGGGAGGTAATTAAAGACATT +
Preference number: 3 (lower is better)
Translates to: NDPGSAKNRSHT*PDDEGEVIKDI
Trigger: AATGTCTTTAATTACCTCCCCTTCATCGTCAGGCCACGTGTGACTTCTGTTCTTAGCACTGCCAGGGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CAA 90 bp TGGCAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTCTTGAGATGCAGAATTaGAAAGCAGCTGTCACCATC +
Preference number: 3 (lower is better)
Translates to: WQGRRLTFKCMQRQVIYCLEMQN*KAAVTI
Trigger: GATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAG...ACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CAA 90 bp GATGGTGCTAGGTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGAACACTGTGGCTTACTaGTTTACTCAACTAAGAAAG +
Preference number: 3 (lower is better)
Translates to: DGARLTACLHYRPENVHANTVAY*FTQLRK
Trigger: CTTTCTTAGTTGAGTAAACAAGTAAGCCACAGTGTT...CGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAACCTAGCACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR TCA 72 bp GCTTCAGTACCAATGATCACAGAAGGAACATCTTCCTaGTGCAAGCTTAGATGGAAGTCAATGACCCTGGCA +
Preference number: 3 (lower is better)
Translates to: ASVPMITEGTSS*CKLRWKSMTLA
Trigger: TGCCAGGGTCATTGACTTCCATCTAAGCTTGCATCAGGAAGATGTTCCTTCTGTGATCATTGGTACTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 72 bp TTTGAGGCCAATATACTTTGTGTTCCTAGGTTCAGATaGCATACACCGACAAGAGAAGGCAGAGACCATCCT +
Preference number: 3 (lower is better)
Translates to: FEANILCVPRFR*HTPTREGRDHP
Trigger: AGGATGGTCTCTGCCTTCTCTTGTCGGTGTATGCCATCTGAACCTAGGAACACAAAGTATATTGGCCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CAA 90 bp AACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATCAGAACACTGTGGCTTACTaGTTTACTCAACTAAGAAAG +
Preference number: 3 (lower is better)
Translates to: NCLSPLQTRERPCDASYQNTVAY*FTQLRK
Trigger: CTTTCTTAGTTGAGTAAACAAGTAAGCCACAGTGTT...CTGATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR-3UTR CAA 90 bp ACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTACTGCAACGTACACCCTTaGGACTCAGAACTCTCAGTG +
Preference number: 3 (lower is better)
Translates to: THKAIWFFPFKHCGLLVYCNVHP*DSELSV
Trigger: CACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCA...GTAAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR GCA 72 bp AACACCAGAGAAGGCAGACACCTGAGCATTTTAAGCTaGTCTAATGAAATGGAAGGATGTCCCTTAATACAC +
Preference number: 3 (lower is better)
Translates to: NTREGRHLSILS*SNEMEGCPLIH
Trigger: GTGTATTAAGGGACATCCTTCCATTTCATTAGAGCAGCTTAAAATGCTCAGGTGTCTGCCTTCTCTGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 72 bp ATCACAGAAAACCACCAGACTCACACAGCTTGTATTTaGATGAACCAGGAGAGACTTCAAGGATCAACTCTA +
Preference number: 3 (lower is better)
Translates to: ITENHQTHTACI*MNQERLQGSTL
Trigger: TAGAGTTGATCCTTGAAGTCTCTCCTGGTTCATTCAAATACAAGCTGTGTGAGTCTGGTGGTTTTCTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR-3UTR CAA 90 bp CAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTCTTGAGATGCAGAATTaGAAAGCAGCTGTCACCATC +
Preference number: 3 (lower is better)
Translates to: QHTRQYGFSLSNTVAYLFLEMQN*KAAVTI
Trigger: GATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAG...AAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR TCA 72 bp CTCAACTGTGCTTCTCCTGAATCCATGTGCCTGAAATaGCATATGCAAGGTGAACATTCTTTATACTGTGTT +
Preference number: 3 (lower is better)
Translates to: LNCASPESMCLK*HMQGEHSLYCV
Trigger: AACACAGTATAAAGAATGTTCACCTTGCATATGTCATTTCAGGCACATGGATTCAGGAGAAGCACAGTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR GCA 72 bp AAGACAACTAGACCCCCAAACAGAATTCTAATCATATaGTCCTCTAACAAGCCAACCAGAACCTTCCAAAAA +
Preference number: 3 (lower is better)
Translates to: KTTRPPNRILII*SSNKPTRTFQK
Trigger: TTTTTGGAAGGTTCTGGTTGGCTTGTTAGAGGAGCATATGATTAGAATTCTGTTTGGGGGTCTAGTTGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CCA 72 bp TGGATTCAATTACAAATACGTTTTCCTTTACAAAGATaGCTTTGGAGGGGTGCAAATGCTACGTGTTTGGAA +
Preference number: 3 (lower is better)
Translates to: WIQLQIRFPLQR*LWRGANATCLE
Trigger: TTCCAAACACGTAGCATTTGCACCCCTCCAAAGCCATCTTTGTAAAGGAAAACGTATTTGTAATTGAATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR TCA 72 bp CAAACCTCTATCTTAGATGTTAAAGAAGACCCTTATTaGCTACACTGGCCAAGAAGCAACAGAGATATAAAG +
Preference number: 3 (lower is better)
Translates to: QTSILDVKEDPY*LHWPRSNRDIK
Trigger: CTTTATATCTCTGTTGCTTCTTGGCCAGTGTAGTCAATAAGGGTCTTCTTTAACATCTAAGATAGAGGTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CCGGGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCTCGTGCCCTGAGACCTaGACCACCCCGGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: PGCRHELPLRAASDTRQPSCPET*TTPACP
Trigger: AGGGCAAGCCGGGGTGGTGCAGGTCTCAGGGCACGA...GGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCCATTCTGCTTCTGCTaGAGGAGGGCGTCGCGACCA +
Preference number: 4 (lower is better)
Translates to: GCRHELPLRAASDTRQPHPFCFC*RRASRP
Trigger: TGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGG...GTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACGCCCATTCCGGTAAATaGGCTCTCCCCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GCRHELPLRAASDTRQPHAHSGK*ALPTKA
Trigger: GGCCTTGGTGGGGAGAGCCCATTTACCGGAATGGGC...GTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGAGGGAGAGGGACTCGTaGCCTGAGACCTGCACCACC +
Preference number: 4 (lower is better)
Translates to: AHSTAEQENELPGCRHELRERDS*PETCTT
Trigger: GGTGGTGCAGGTCTCAGGGCACGAGTCCCTCTCCCT...CAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CCGGGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCGTGAGGCTGCCCTGGTaGCATCACTTCCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: PGCRHELPLRAASDTRQPVRLPW*HHFPCK
Trigger: CTTACATGGGAAGTGATGCCACCAGGGCAGCCTCAC...GGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CCGGGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCATAGGGAGGCTGCCCTaGCCCAAAGGTCTGCTAATG +
Preference number: 4 (lower is better)
Translates to: PGCRHELPLRAASDTRQPIGRLP*PKGLLM
Trigger: CATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTAT...GGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CCGGGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACTCAAGAGGCCACTaGCTCTCAGGAGTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: PGCRHELPLRAASDTRQPHSRGH*LSGVQN
Trigger: ATTCTGGACTCCTGAGAGGCAGTGGCCTCTTGAGTG...GGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CCGGGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCTGCTGGAGCCTGTCCTaGCATCATACAAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGCRHELPLRAASDTRQPCWSLS*HHTRCC
Trigger: ACAGCACCTTGTATGATGGCAGGACAGGCTCCAGCA...GGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGAGCCAGCAGCCAGCCTaGCCTGCTCCAAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: AHSTAEQENELPGCRHELSQQPA*PAPKGQ
Trigger: TTGTCCTTTTGGAGCAGGGCAGGCTGGCTGCTGGCT...CAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CTGCTGGATTTGCAGCCACGGCTCTGGATCTGGGGCATCTACTGGCCTCCCCTGAACAGGAGAACGAGCTaGCGGGCTGCAGGCACGAGC +
Preference number: 4 (lower is better)
Translates to: LLDLQPRLWIWGIYWPPLNRRTS*RAAGTS
Trigger: GCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTT...CAGGGGAGGCCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCCCATTCTGCTTCTGCTaGAGGAGGGCGTCGCGACCA +
Preference number: 4 (lower is better)
Translates to: AAPQGCIRHTATPPELIGPFCFC*RRASRP
Trigger: TGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGG...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCAAACGAGCTGCCGGGCTaGAGGCACGAGCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPNELPG*RHELPL
Trigger: GAGGGGCAGCTCGTGCCTGCAGCCCGGCAGCTCGTT...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGCCCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTAGGCACTGCTGGTGGTCTAGCTTGGCCTTGGCCTaGAAGCGGTATCCCGCGATG +
Preference number: 4 (lower is better)
Translates to: SPGKRGAPGCSCRHCWWSSLALA*KRYPAM
Trigger: CATCGCGGGATACCGCTTCCAGGCCAAGGCCAAGCT...AGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGCGCCACGTTTGCCTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CCA 90 bp AGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTAGCGCAGGGCACTTCTaGGCACCCACATTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SPQHSRTGERAAGLQARASAGHF*APTLSP
Trigger: AGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCT...AGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTCCAGGACAACACACCTaGTCCCTTCCCCTCCCTATT +
Preference number: 4 (lower is better)
Translates to: SPQHSRTGERAAGLQARAPGQHT*SLPLPI
Trigger: AATAGGGAGGGGAAGGGATCAGGTGTGTTGTCCTGG...AGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTCTCCTGGGGCCAGAGTaGAACCGGGGTTTAATCACT +
Preference number: 4 (lower is better)
Translates to: SPQHSRTGERAAGLQARALLGPE*NRGLIT
Trigger: AGTGATTAAACCCCGGTTTCACTCTGGCCCCAGGAG...AGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTCACCCCGGCTTGCCCTaGCTTGAGATGCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: SPQHSRTGERAAGLQARAHPGLP*LEMQNL
Trigger: CAAATTCTGCATCTCAAGGCAGGGCAAGCCGGGGTG...AGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp TCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGTCGTGCCCTGAGACCTaGACCACCCCGGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SLELSTARKVERPRTTHLSCPET*TTPACP
Trigger: AGGGCAAGCCGGGGTGGTGCAGGTCTCAGGGCACGA...CAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCAGCTGCCCCTCAGGGCTaGATCCGACACACGGCAACC +
Preference number: 4 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPAAPQG*IRHTAT
Trigger: GGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATGCCCATTCCGGTAAATaGGCTCTCCCCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNAHSGK*ALPTKA
Trigger: GGCCTTGGTGGGGAGAGCCCATTTACCGGAATGGGC...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTTCACAGCTGGTGTTCACTGGTTGGCCCTCCAGCCGGCAACACCTCTCCTCCTCTGGTGTTCACTGGTTaGCCCTCCAGCCGGCAACAC +
Preference number: 4 (lower is better)
Translates to: LHSWCSLVGPPAGNTSPPLVFTG*PSSRQH
Trigger: GTGTTGCCGGCTGGAGGGCCAACCAGTGAACACCAG...AGGAGGAGAGGTGTTGCCGGCTGGAGGGCCAACCAGTGAACACCAGCTGTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCCCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTAGGCACTGCTGGTGGTCTCCAGGACAACACACCTaGTCCCTTCCCCTCCCTATT +
Preference number: 4 (lower is better)
Translates to: SPGKRGAPGCSCRHCWWSPGQHT*SLPLPI
Trigger: AATAGGGAGGGGAAGGGATCAGGTGTGTTGTCCTGG...AGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGCGCCACGTTTGCCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR TCA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTCGGGGAGGGAGGCGCTaGCGGAGAGACCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVARGGRR*RRDPWL
Trigger: GAGCCATGGGTCTCTCCGTCAGCGCCTCCCTCCCCG...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp GGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCGGATTCCGTATTTCTaGCCAACACTCATCACTTCA +
Preference number: 4 (lower is better)
Translates to: GCRHELPLRAASDTRQPHRIPYF*PTLITS
Trigger: TGAAGTGATGAGTGTTGGCCAGAAATACGGAATCCG...GTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR CCA 90 bp GGCACTTCTGGGCACCCACATTGTCTCCTGCTCCAGAGGATATGGAAGGGTGGGGGTAGAGCTTGGCCTTaGCCTGGAAGCGGTATCCCG +
Preference number: 4 (lower is better)
Translates to: GTSGHPHCLLLQRIWKGGGRAWP*PGSGIP
Trigger: CGGGATACCGCTTCCAGGCCAAGGCCAAGCTCTACC...CCCACCCTTCCATATCCTCTGGAGCAGGAGACAATGTGGGTGCCCAGAAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGATCCCTTCCCGACAGGGTAGAGCTTaGCCTTGGCCTGGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: LSTARKVERPRTTHLIPSRQGRA*PWPGSG
Trigger: ACCGCTTCCAGGCCAAGGCCAAGCTCTACCCTGTCG...GGAAGGGATCAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GGCACTTCTGGGCACCCACATTGTCTCCTGCTCCAGAGGATATGGAAGGGTGGGCGACAGGGTAGAGCTTaGCCTTGGCCTGGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: GTSGHPHCLLLQRIWKGGRQGRA*PWPGSG
Trigger: ACCGCTTCCAGGCCAAGGCCAAGCTCTACCCTGTCG...CCCACCCTTCCATATCCTCTGGAGCAGGAGACAATGTGGGTGCCCAGAAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATTCCTTTCGGCGCTTCTaGGTGAAGAGGGAGGCGACA +
Preference number: 4 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNSFRRF*VKREAT
Trigger: TGTCGCCTCCCTCTTCACCCAGAAGCGCCGAAAGGA...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCATAGGGAGGCTGCCCTaGCCCAAAGGTCTGCTAATG +
Preference number: 4 (lower is better)
Translates to: AAPQGCIRHTATPPELIGIGRLP*PKGLLM
Trigger: CATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTAT...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCAATTGTTGGCCTGAAGTaGTGGCGGGGAGGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPIVGLK*WRGGRR
Trigger: GCGCCTCCCTCCCCGCCACCACTTCAGGCCAACAAT...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR CAA 72 bp GAGGCGCTGACGGAGAGACCCATGGCTCACCACTTATaGCGTGTACACAAGGCCTGGGGCAAGCCTCACAAG +
Preference number: 4 (lower is better)
Translates to: EALTERPMAHHL*RVHKAWGKPHK
Trigger: CTTGTGAGGCTTGCCCCAGGCCTTGTGTACACGCAATAAGTGGTGAGCCATGGGTCTCTCCGTCAGCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR TCA 90 bp GGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACGAGCACAAAATGCTATaGCAGGTAATTGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GCRHELPLRAASDTRQPHEHKML*QVIAER
Trigger: TCTCTCTGCAATTACCTGTCATAGCATTTTGTGCTC...GTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTCTCCTGGGGCGTCGCGACCAATaGAATCCATGCCCTCTATGG +
Preference number: 4 (lower is better)
Translates to: QRHCLKAQGTSGHPHCLLGRRDQ*NPCPLW
Trigger: CCATAGAGGGCATGGATTTCATTGGTCGCGACGCCC...CAGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565186.5
CDS-3UTR GCA 90 bp TCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGCCATTCTGCTTCTGCTaGAGGAGGGCGTCGCGACCA +
Preference number: 4 (lower is better)
Translates to: SLELSTARKVERPRTTHLPFCFC*RRASRP
Trigger: TGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGG...CAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATTCTGCTGTCACCACTTaGTCTTCCCCCGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNSAVTT*SSPVSS
Trigger: TGAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGA...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCATGCACCACCCCGGCTTaGCCTGCCTTGAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPCTTPA*PALRCR
Trigger: TCTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCA...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CTCATACTCTCCCCGGTTGATGAAATCTGCTGTCACCACTTGCTCTTCCCCCGTTCGTGCCCTGAGACCTaGACCACCCCGGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LILSPVDEICCHHLLFPRSCPET*TTPACP
Trigger: AGGGCAAGCCGGGGTGGTGCAGGTCTCAGGGCACGA...ACGGGGGAAGAGCAAGTGGTGACAGCAGATTTCATCAACCGGGGAGAGTATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR GCA 90 bp CACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGGCTGCAGGCACGAGCTaGCCCTCAGGGCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: HTATPPELIGCSKKMEPKAAGTS*PSGLHP
Trigger: CGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGC...CTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCGCTGCAGGCACGAGCTaGCCCTCAGGGCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: MQRTPFGLRTLSGLTWVTAAGTS*PSGLHP
Trigger: CGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGC...GGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCAACGAGCTGCCGGGCTaGAGGCACGAGCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VTITHVHSGACFCPVRHTNELPG*RHELPL
Trigger: GAGGGGCAGCTCGTGCCTGCAGCCCGGCAGCTCGTT...GGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGTGGTCAGGAAGTTATaGTGCCCTCTCCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SPQHSRTGERAAGLQARAVVRKL*CPLLLN
Trigger: GTTCAAGAGGAGAGGGCAGCATAACTTCCTGACCAC...AGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCTCTCCCCACCAAGGGCCCATTCCGGTAAATaGGCTCTCCCCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GGLANILPIPVNGLSPPRAHSGK*ALPTKA
Trigger: GGCCTTGGTGGGGAGAGCCCATTTACCGGAATGGGC...CCTTGGTGGGGAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CCA 90 bp CTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGATCCCTTCCGAGGTGAGGCTGCCCTaGTGGCATCACTTCCCATGT +
Preference number: 4 (lower is better)
Translates to: LSTARKVERPRTTHLIPSEVRLP*WHHFPC
Trigger: ACATGGGAAGTGATGCCACCAGGGCAGCCTCACCTC...GGAAGGGATCAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAAGCTGAGTGAGGGGTaGGAAGGGAAGAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNKLSEG*EGKKSP
Trigger: TGGGCTCTTCTTCCCTTCCCACCCCTCACTCAGCTT...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGAGGATATGGAAGGGTaGGTGGAGGGAAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: SPQHSRTGERAAGLQARAEDMEG*VEGNKE
Trigger: CTCTTTGTTTCCCTCCACCCACCCTTCCATATCCTC...AGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTGCCCTGGCCCAAAGGTCTGCTAATGGCTTCTGCAGGGAGGATGAGGATGGTGCTGCCACCAAGACGGTaGCAAGGGAGGAGGCTAACT +
Preference number: 4 (lower is better)
Translates to: LPWPKGLLMASAGRMRMVLPPRR*QGRRLT
Trigger: AGTTAGCCTCCTCCCTTGCCACCGTCTTGGTGGCAG...CACCATCCTCATCCTCCCTGCAGAAGCCATTAGCAGACCTTTGGGCCAGGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp GGCACTTCTGGGCACCCACATTGTCTCCTGCTCCAGAGGATATGGAAGGGTGGGGAGGGCCAATCAGATTaGGGGCTGTGTACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTSGHPHCLLLQRIWKGGEGQSD*GLCTSR
Trigger: CCTGGAAGTACACAGCCCTCAATCTGATTGGCCCTC...CCCACCCTTCCATATCCTCTGGAGCAGGAGACAATGTGGGTGCCCAGAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTAAGGTCAGACCCTTTTaGCTGGGAAAAGCAACACAC +
Preference number: 4 (lower is better)
Translates to: SPQHSRTGERAAGLQARAKVRPF*LGKATH
Trigger: GTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGACCTT...AGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCTCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCACAGCCCGCAAGGTTaGAAGGCCCAGGACAACACA +
Preference number: 4 (lower is better)
Translates to: SSLELSTARKVERPRTTHHSPQG*KAQDNT
Trigger: TGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTG...GTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTCTCCTGAACAGAGACACTGCCTaGAAGCGCAGGGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: QRHCLKAQGTSGHPHCLLNRDTA*KRRALL
Trigger: CAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTT...CAGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp GGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTCAGTGGGCCTCCCAGTaGGAACCAAACAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GKQRHCLKAQGTSGHPHCQWASQ*EPNRSG
Trigger: GCCACTCCTGTTTGGTTCTCACTGGGAGGCCCACTG...ACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTAAAGATCCCACTTACTaGAGTGCCTCGGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: SPQHSRTGERAAGLQARAKDPTY*SASDVF
Trigger: GAAGACATCCGAGGCACTTCAGTAAGTGGGATCTTT...AGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR GCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGCCATTCTGCTTCTGCTaGAGGAGGGCGTCGCGACCA +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVPFCFC*RRASRP
Trigger: TGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGG...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGGGAGGACCATTCTGCTTCTGCTaGAGGAGGGCGTCGCGACCA +
Preference number: 4 (lower is better)
Translates to: KLPSFLHRYCHQDGGKGGPFCFC*RRASRP
Trigger: TGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGG...TCCTCCCTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CTGCTGGATTTGCAGCCACGGCTCTGGATCTGGGGCATCTACTGGCCTCCCCTGTGTAGCTGTAGGCACTaGTGGTGGTCTTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: LLDLQPRLWIWGIYWPPLCSCRH*WWSCQH
Trigger: ATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACA...CAGGGGAGGCCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGCTGCCCCTCAGGGCTaGATCCGACACACGGCAACC +
Preference number: 4 (lower is better)
Translates to: KQLSPSLMSTVELASVLSAAPQG*IRHTAT
Trigger: GGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC...TGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ATCTCTTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGCTGCAGGCACGAGCTaGCCCTCAGGGCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: ISSMSGDRDPWKSVKNTVAAGTS*PSGLHP
Trigger: CGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGC...CACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAAGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATCAGGCTGCAGGCACGAGCTaGCCCTCAGGGCTGCATCCG +
Preference number: 4 (lower is better)
Translates to: NCLSPLQTRERPCDASYQAAGTS*PSGLHP
Trigger: CGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGC...CTGATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGGCCAGAGGTATCGAGTaGCAGCCCACAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVARGIE*QPTAQQ
Trigger: CTGCTGTGCTGTGGGCTGGCACTCGATACCTCTGGC...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AGCCCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTAGGCACTGCTGGTGGTCTACCCACATTGTCTCCTaGTCCAGAGGATATGGAAGG +
Preference number: 4 (lower is better)
Translates to: SPGKRGAPGCSCRHCWWSTHIVS*SRGYGR
Trigger: CCTTCCATATCCTCTGGAGCAGGAGACAATGTGGGT...AGACCACCAGCAGTGCCTACAGCTACAGCCTGGAGCGCCACGTTTGCCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR GCA 90 bp AGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTTGCCATCATACAAGGTaGTGTGACAGCAATGCAAGG +
Preference number: 4 (lower is better)
Translates to: SPQHSRTGERAAGLQARACHHTR*CDSNAR
Trigger: CCTTGCATTGCTGTCACAGCACCTTGTATGATGGCA...AGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGCTCTTTCTTCCAATCTaGACCCACCATCTGACATTC +
Preference number: 4 (lower is better)
Translates to: AHSTAEQENELPGCRHELLFLPI*THHLTF
Trigger: GAATGTCAGATGGTGGGTGCAGATTGGAAGAAAGAG...CAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR GCA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCACTCAGTGGAAACCTTaGTTGGTGGAGACAGTGCAC +
Preference number: 4 (lower is better)
Translates to: AAPQGCIRHTATPPELIGTQWKP*LVETVH
Trigger: GTGCACTGTCTCCACCAAGCAAGGTTTCCACTGAGT...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp GCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGTCTAGGTCTGAATCATaGTCGTCCAGGATGAACATG +
Preference number: 4 (lower is better)
Translates to: AHSTAEQENELPGCRHELSRSES*SSRMNM
Trigger: CATGTTCATCCTGGACGACCATGATTCAGACCTAGA...CAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCGCCCATTCCGGTAAATaGGCTCTCCCCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGAHSGK*ALPTKA
Trigger: GGCCTTGGTGGGGAGAGCCCATTTACCGGAATGGGC...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGCCCATTCCGGTAAATaGGCTCTCCCCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: QWSLLLSCQTYLLPPREAAHSGK*ALPTKA
Trigger: GGCCTTGGTGGGGAGAGCCCATTTACCGGAATGGGC...AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGAGCTTGGCCTTGGCCTaGAAGCGGTATCCCGCGATG +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVSLALA*KRYPAM
Trigger: CATCGCGGGATACCGCTTCCAGGCCAAGGCCAAGCT...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCAGCTTGGCCTTGGCCTaGAAGCGGTATCCCGCGATG +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGSLALA*KRYPAM
Trigger: CATCGCGGGATACCGCTTCCAGGCCAAGGCCAAGCT...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGGTAGAGCTTGGCCTTaGCCTGGAAGCGGTATCCCG +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEEGRAWP*PGSGIP
Trigger: CGGGATACCGCTTCCAGGCCAAGGCCAAGCTCTACC...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp TGGCTTTGGAGGGGTGCAAATGCTACGTGTTTGGAAGAGCAGAGGAGGCCTGCAGGTAGAGCTTGGCCTTaGCCTGGAAGCGGTATCCCG +
Preference number: 4 (lower is better)
Translates to: WLWRGANATCLEEQRRPAGRAWP*PGSGIP
Trigger: CGGGATACCGCTTCCAGGCCAAGGCCAAGCTCTACC...TGCAGGCCTCCTCTGCTCTTCCAAACACGTAGCATTTGCACCCCTCCAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCCGACAGGGTAGAGCTTaGCCTTGGCCTGGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGRQGRA*PWPGSG
Trigger: ACCGCTTCCAGGCCAAGGCCAAGCTCTACCCTGTCG...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGCTCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACATTCCGGCAGCTCTCTaGAACTCAGCACAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: SSLELSTARKVERPRTTHIPAAL*NSAQPA
Trigger: TGCGGGCTGTGCTGAGTTCCAGAGAGCTGCCGGAAT...GTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCGTGCCCTGAGACCTGCATTGCAGCCACGGCTCTaGATCTGGGGCATCTACTGG +
Preference number: 4 (lower is better)
Translates to: LLQENGTQGRGTRALRPALQPRL*IWGIYW
Trigger: CCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAA...TGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCAATCACTGGGCTATGTaGTCTCTGTGTCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: AAPQGCIRHTATPPELIGNHWAM*SLCLWP
Trigger: AGGCCAGAGACACAGAGACCACATAGCCCAGTGATT...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CTGCCCTGGCCCAAAGGTCTGCTAATGGCTTCTGCAGGGAGGATGAGGATGGTGCGTGTACACAAGGCCTaGGGCAAGCCTCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: LPWPKGLLMASAGRMRMVRVHKA*GKPHKS
Trigger: AGACTTGTGAGGCTTGCCCCAGGCCTTGTGTACACG...CACCATCCTCATCCTCCCTGCAGAAGCCATTAGCAGACCTTTGGGCCAGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATATATTTGAGGGTGGCTaGGCATGGTGCCTCACACCT +
Preference number: 4 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNIFEGG*AWCLTP
Trigger: AGGTGTGAGGCACCATGCCCAGCCACCCTCAAATAT...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565186.5
3UTR CAA 72 bp GGAGGCTGTGGTTGTCCCTCCTTATTCCTGCTGGATTaGCAGCCACGGCTCTGGATCTGGGGCATCTACTGG +
Preference number: 4 (lower is better)
Translates to: GGCGCPSLFLLD*QPRLWIWGIYW
Trigger: CCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CTGCCCTGGCCCAAAGGTCTGCTAATGGCTTCTGCAGGGAGGATGAGGATGGTGCAAGTGAGGCTGACCTaGCAAAGTCAAACGCACTGG +
Preference number: 4 (lower is better)
Translates to: LPWPKGLLMASAGRMRMVQVRLT*QSQTHW
Trigger: CCAGTGCGTTTGACTTTGTCAGGTCAGCCTCACTTG...CACCATCCTCATCCTCCCTGCAGAAGCCATTAGCAGACCTTTGGGCCAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp GCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGAACTCAGCACACAGCCCGCAAGGTTaGAAGGCCCAGGACAACACA +
Preference number: 4 (lower is better)
Translates to: ALCWRVKPGIPAALWNSAHSPQG*KAQDNT
Trigger: TGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTG...TGCTGAGTTCCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp ACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCCACAGCCCGCAAGGTTaGAAGGCCCAGGACAACACA +
Preference number: 4 (lower is better)
Translates to: TVELASVLSDIPPATTRSHSPQG*KAQDNT
Trigger: TGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTG...GCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGCACAGCCCGCAAGGTTaGAAGGCCCAGGACAACACA +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVHSPQG*KAQDNT
Trigger: TGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTG...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CCTAGGTTCAGATGGCATACACCGACAAGAGAAGGCAGAGACCATCCTTCGTGGCAGTGGGCCTCCCAGTaGGAACCAAACAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: PRFRWHTPTREGRDHPSWQWASQ*EPNRSG
Trigger: GCCACTCCTGTTTGGTTCTCACTGGGAGGCCCACTG...CCACGAAGGATGGTCTCTGCCTTCTCTTGTCGGTGTATGCCATCTGAACCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCTCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACGGGTCCTGTCTTCAGTaGAACACTGAACGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: SSLELSTARKVERPRTTHGSCLQ*NTERSR
Trigger: CCGAGAGCGTTCAGTGTTTCACTGAAGACAGGACCC...GTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGTCTCAGGAACTCAAATaGCCTGTCCCAGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: AHSTAEQENELPGCRHELSQELK*PVPDFS
Trigger: AGAAAAATCTGGGACAGGGCATTTGAGTTCCTGAGA...CAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGGGAGGAACTCCATTCTGCTTCTaGTGCAGGAGGGCGTCGCGA +
Preference number: 4 (lower is better)
Translates to: KLPSFLHRYCHQDGGKGGTPFCF*CRRASR
Trigger: TCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGT...TCCTCCCTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCACTCCATTCTGCTTCTaGTGCAGGAGGGCGTCGCGA +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGTPFCF*CRRASR
Trigger: TCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGT...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp TGTAGCTCTGCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGACTCCATTCTGCTTCTaGTGCAGGAGGGCGTCGCGA +
Preference number: 4 (lower is better)
Translates to: CSSALCWRVKPGIPAALWTPFCF*CRRASR
Trigger: TCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGT...CCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CTGCCCTGGCCCAAAGGTCTGCTAATGGCTTCTGCAGGGAGGATGAGGATGGTGCACTGCTGGTGGTCTTaGCAACATACTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: LPWPKGLLMASAGRMRMVHCWWS*QHTAHS
Trigger: GGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTG...CACCATCCTCATCCTCCCTGCAGAAGCCATTAGCAGACCTTTGGGCCAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CTGCTGGATTTGCAGCCACGGCTCTGGATCTGGGGCATCTACTGGCCTCCCCTGCCGGTTGATGAAATCTaGTGTCACCACTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LLDLQPRLWIWGIYWPPLPVDEI*CHHLLF
Trigger: GAAGAGCAAGTGGTGACAGCAGATTTCATCAACCGG...CAGGGGAGGCCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GATGGTGCTAGGTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGAGGGAGAGGGACTCGTaGCCTGAGACCTGCACCACC +
Preference number: 4 (lower is better)
Translates to: DGARLTACLHYRPENVHARERDS*PETCTT
Trigger: GGTGGTGCAGGTCTCAGGGCACGAGTCCCTCTCCCT...CGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAACCTAGCACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AGAAAAATTGTGCACAAAGCCCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTAAACAGGAGAACGAGCTaGCGGGCTGCAGGCACGAGC +
Preference number: 4 (lower is better)
Translates to: RKIVHKAQANVALQAVAVNRRTS*RAAGTS
Trigger: GCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTT...TACAGCTACAGCCTGGAGCGCCACGTTTGCCTGGGCTTTGTGCACAATTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR GCA 90 bp AGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGGCCAGAGGTATCGAGTaGCAGCCCACAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SSCHHHSCPQWSLLLSCQARGIE*QPTAQQ
Trigger: CTGCTGTGCTGTGGGCTGGCACTCGATACCTCTGGC...CTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGAACTCAGCAAGAGCAGAGGAGGCCTaGAGCTCTCAGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: ALCWRVKPGIPAALWNSARAEEA*SSQSPV
Trigger: GACAGGTGACTGAGAGCTGCAGGCCTCCTCTGCTCT...TGCTGAGTTCCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCTCACAGGGGCAGAAATaGTCGGTCACCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGSQGQK*SVTLCT
Trigger: GGTGCACAGGGTGACCGAGCATTTCTGCCCCTGTGA...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp AGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGAGCTTGGCCTTGGCCTaGAAGCGGTATCCCGCGATG +
Preference number: 4 (lower is better)
Translates to: SSCHHHSCPQWSLLLSCQSLALA*KRYPAM
Trigger: CATCGCGGGATACCGCTTCCAGGCCAAGGCCAAGCT...CTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGCGACAGGGTAGAGCTTaGCCTTGGCCTGGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: SSCHHHSCPQWSLLLSCQRQGRA*PWPGSG
Trigger: ACCGCTTCCAGGCCAAGGCCAAGCTCTACCCTGTCG...CTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCTCCTTTCGGCGCTTCTaGGTGAAGAGGGAGGCGACA +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGSFRRF*VKREAT
Trigger: TGTCGCCTCCCTCTTCACCCAGAAGCGCCGAAAGGA...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGTCCTTTCGGCGCTTCTaGGTGAAGAGGGAGGCGACA +
Preference number: 4 (lower is better)
Translates to: SGACFCPVRHTSCHHEKLSFRRF*VKREAT
Trigger: TGTCGCCTCCCTCTTCACCCAGAAGCGCCGAAAGGA...CAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGGAGGTGAGGCTGCCCTaGTGGCATCACTTCCCATGT +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVEVRLP*WHHFPC
Trigger: ACATGGGAAGTGATGCCACCAGGGCAGCCTCACCTC...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGGAGGTGAGGCTGCCCTaGTGGCATCACTTCCCATGT +
Preference number: 4 (lower is better)
Translates to: SGACFCPVRHTSCHHEKLEVRLP*WHHFPC
Trigger: ACATGGGAAGTGATGCCACCAGGGCAGCCTCACCTC...CAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp TTGTCCCTCCTTATTCCTGCTGGATTTGCAGCCACGGCTCTGGATCTGGGGCATATTCCGGCAGCTCTCTaGAACTCAGCACAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LSLLIPAGFAATALDLGHIPAAL*NSAQPA
Trigger: TGCGGGCTGTGCTGAGTTCCAGAGAGCTGCCGGAAT...ATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTTTACAAAGATGGCTTTaGAGGGGTGCAAATGCTACG +
Preference number: 4 (lower is better)
Translates to: SPQHSRTGERAAGLQARALQRWL*RGANAT
Trigger: CGTAGCATTTGCACCCCTCCAAAGCCATCTTTGTAA...AGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGGGAGGTCAGGATTTCTaGTTCTACTTCAACAAACAG +
Preference number: 4 (lower is better)
Translates to: AHSTAEQENELPGCRHELGGQDF*FYFNKQ
Trigger: CTGTTTGTTGAAGTAGAACCAGAAATCCTGACCTCC...CAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGAACTCAGCATTGCAGCCACGGCTCTaGATCTGGGGCATCTACTGG +
Preference number: 4 (lower is better)
Translates to: ALCWRVKPGIPAALWNSALQPRL*IWGIYW
Trigger: CCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAA...TGCTGAGTTCCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCAGGCCCACGGAAAACTaGCAACCCTGGGTCTCCGTT +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGRPTEN*QPWVSV
Trigger: AACGGAGACCCAGGGTTGCCAGTTTTCCGTGGGCCT...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATCCGGGGTTTAATCACTaGGCTATGTGGTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNPGFNH*AMWSLC
Trigger: ACACAGAGACCACATAGCCCAGTGATTAAACCCCGG...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGAGGGCCAATCAGATTaGGGGCTGTGTACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEEEGQSD*GLCTSR
Trigger: CCTGGAAGTACACAGCCCTCAATCTGATTGGCCCTC...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGGGGCGTCGCGACCAATaGAATCCATGCCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVGRRDQ*NPCPSL
Trigger: TAGAGAAGGGCATGGATTTCATTGGTCGCGACGCCC...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000567046.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCGTGCCCTGAGACCTGCACGGCTTGCCCTGCCTTaGGATGCAGAATTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LLQENGTQGRGTRALRPARLALP*DAEFES
Trigger: GCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCG...TGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAAGGTCAGACCCTTTTaGCTGGGAAAAGCAACACAC +
Preference number: 4 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNKVRPF*LGKATH
Trigger: GTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGACCTT...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CTTCTGCTGCAGGAGGGCGTCGCGACCAATGAAATCCATGCCCTCTATGGGGATCAAGTGAGGCTGACCTaGCAAAGTCAAACGCACTGG +
Preference number: 4 (lower is better)
Translates to: LLLQEGVATNEIHALYGDQVRLT*QSQTHW
Trigger: CCAGTGCGTTTGACTTTGTCAGGTCAGCCTCACTTG...ATCCCCATAGAGGGCATGGATTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565186.5
CDS-3UTR TCA 90 bp AGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGCCAGGACAACACACCTaGTCCCTTCCCCTCCCTATT +
Preference number: 4 (lower is better)
Translates to: SGACFCPVRHTSCHHEKLPGQHT*SLPLPI
Trigger: AATAGGGAGGGGAAGGGATCAGGTGTGTTGTCCTGG...CAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCAACAGAGACACTGCCTaGAAGCGCAGGGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: LMSTVELASVLSDIPPATNRDTA*KRRALL
Trigger: CAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTT...GGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCTTTCTACCCCACGCCCATTGTTCCGAAGAAGGAGAGGCTATGTGGGGCGGAGAGTCCAGAATGCTCTaGTATCTGACACCGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SFLPHAHCSEEGEAMWGGESRML*YLTPVV
Trigger: GACCACCGGTGTCAGATATCAGAGCATTCTGGACTC...TCCGCCCCACATAGCCTCTCCTTCTTCGGAACAATGGGCGTGGGGTAGAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR TCA 90 bp TGTAGCTCTGCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGCTTAAATTGTTGGCCTaGAGTGGTGGCGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: CSSALCWRVKPGIPAALWLKLLA*SGGGEG
Trigger: TCCCTCCCCGCCACCACTTCAGGCCAACAATTTAAG...CCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR TCA 90 bp GCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGATATGTCCCAAGTGTTaGCTGGAGAGTAAAGTGTTA +
Preference number: 4 (lower is better)
Translates to: AHSTAEQENELPGCRHELICPKC*LESKVL
Trigger: TAACACTTTACTCTCCAGTCAACACTTGGGACATAT...CAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR GCA 90 bp CCCGGCTTGCCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTAGCCAGCAGCCAGCCTaGCCTGCTCCAAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: PGLPCLEMQNLKAAVTITSQQPA*PAPKGQ
Trigger: TTGTCCTTTTGGAGCAGGGCAGGCTGGCTGCTGGCT...AGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCCCATTCTGCTTCTGCTaGAGGAGGGCGTCGCGACCA +
Preference number: 4 (lower is better)
Translates to: VTITHVHSGACFCPVRHTPFCFC*RRASRP
Trigger: TGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGG...GGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGTCTGCTGTCACCACTTaGTCTTCCCCCGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEESAVTT*SSPVSS
Trigger: TGAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGA...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCTCTGCTGTCACCACTTaGTCTTCCCCCGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGSAVTT*SSPVSS
Trigger: TGAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGA...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCCACCCCGGCTTGCCCTaGCTTGAGATGCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: LMSTVELASVLSDIPPATHPGLP*LEMQNL
Trigger: CAAATTCTGCATCTCAAGGCAGGGCAAGCCGGGGTG...GGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AAGTTTCACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGTGCACCACCCCGGCTTaGCCTGCCTTGAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: KFHLGKTETLPESAGHFWCTTPA*PALRCR
Trigger: TCTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCA...CCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGTGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GGAAAACTGGCAACCCTGGGTCTCCGTTTGAGGCCAATATACTTTGTGTTCCTATCGTGCCCTGAGACCTaGACCACCCCGGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: GKLATLGLRLRPIYFVFLSCPET*TTPACP
Trigger: AGGGCAAGCCGGGGTGGTGCAGGTCTCAGGGCACGA...TAGGAACACAAAGTATATTGGCCTCAAACGGAGACCCAGGGTTGCCAGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GAGATGAAGAAAATTATAGGGAGGCTGCCCTGGCCCAAAGGTCTGCTAATGGCTAGGGAGAGGGACTCGTaGCCTGAGACCTGCACCACC +
Preference number: 4 (lower is better)
Translates to: EMKKIIGRLPWPKGLLMARERDS*PETCTT
Trigger: GGTGGTGCAGGTCTCAGGGCACGAGTCCCTCTCCCT...AGCCATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTATAATTTTCTTCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATTTGGAGGGGTGCAAATaGTACGTGTTTGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNLEGCK*YVFGRA
Trigger: TGCTCTTCCAAACACGTAGCATTTGCACCCCTCCAA...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTCTCCTGAGCTCCCATCATTCTTaGATCGCTACTGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: QRHCLKAQGTSGHPHCLLSSHHS*IATATK
Trigger: CTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCT...CAGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCATCCCACTTACTGAAGTaGCTCGGATGTCTTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPSHLLK*LGCLQG
Trigger: GCCCTGAAGACATCCGAGGCACTTCAGTAAGTGGGA...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp AAGTTTCACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGAGCTTGGCCTTGGCCTaGAAGCGGTATCCCGCGATG +
Preference number: 4 (lower is better)
Translates to: KFHLGKTETLPESAGHFWSLALA*KRYPAM
Trigger: CATCGCGGGATACCGCTTCCAGGCCAAGGCCAAGCT...CCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGTGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGGGTAGAGCTTGGCCTTaGCCTGGAAGCGGTATCCCG +
Preference number: 4 (lower is better)
Translates to: HTATPPELIGCSKKMEPKGRAWP*PGSGIP
Trigger: CGGGATACCGCTTCCAGGCCAAGGCCAAGCTCTACC...CTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGGGTAGAGCTTGGCCTTaGCCTGGAAGCGGTATCCCG +
Preference number: 4 (lower is better)
Translates to: HHSCPQWSLLLSCQTYLLGRAWP*PGSGIP
Trigger: CGGGATACCGCTTCCAGGCCAAGGCCAAGCTCTACC...CAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGCGACAGGGTAGAGCTTaGCCTTGGCCTGGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: HTATPPELIGCSKKMEPKRQGRA*PWPGSG
Trigger: ACCGCTTCCAGGCCAAGGCCAAGCTCTACCCTGTCG...CTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGGTGAGGCTGCCCTGGTaGCATCACTTCCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVVRLPW*HHFPCK
Trigger: CTTACATGGGAAGTGATGCCACCAGGGCAGCCTCAC...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGTGAGGCTGCCCTGGTaGCATCACTTCCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: QWSLLLSCQTYLLPPREAVRLPW*HHFPCK
Trigger: CTTACATGGGAAGTGATGCCACCAGGGCAGCCTCAC...AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp TACACTCCATTCTGCTTCTGCTGCAGGAGGGCGTCGCGACCAATGAAATCCATGGAGGTGAGGCTGCCCTaGTGGCATCACTTCCCATGT +
Preference number: 4 (lower is better)
Translates to: YTPFCFCCRRASRPMKSMEVRLP*WHHFPC
Trigger: ACATGGGAAGTGATGCCACCAGGGCAGCCTCACCTC...CATGGATTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGAAGCTGAGTGAGGGGTaGGAAGGGAAGAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVKLSEG*EGKKSP
Trigger: TGGGCTCTTCTTCCCTTCCCACCCCTCACTCAGCTT...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTCCAGGCTGTAGCTGTAGGCACTGCTGGTGGTCTTGCCAACATACTGCCCATTATAGGGAGGCTGCCCTaGCCCAAAGGTCTGCTAATG +
Preference number: 4 (lower is better)
Translates to: LQAVAVGTAGGLANILPIIGRLP*PKGLLM
Trigger: CATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTAT...AATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACAGCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CCA 90 bp GGGGGAAAGGAGGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACATTCCGGCAGCTCTCTaGAACTCAGCACAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GGKEEKRSLALCNVHPLDIPAAL*NSAQPA
Trigger: TGCGGGCTGTGCTGAGTTCCAGAGAGCTGCCGGAAT...GTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCCTCCTTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTCTCCTGACTCAGAACTCTCAGTaGACTAACGTGGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: QRHCLKAQGTSGHPHCLLTQNSQ*TNVGHL
Trigger: GAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGT...CAGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AAGTTTCACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGCTGGTGTTCACTGGTTaGCCCTCCAGCCGGCAACAC +
Preference number: 4 (lower is better)
Translates to: KFHLGKTETLPESAGHFWLVFTG*PSSRQH
Trigger: GTGTTGCCGGCTGGAGGGCCAACCAGTGAACACCAG...CCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGTGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AAGTTTCACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGACAGCTGGTGTTCACTaGTTGGCCCTCCAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: KFHLGKTETLPESAGHFWTAGVH*LALQPA
Trigger: TGCCGGCTGGAGGGCCAACCAGTGAACACCAGCTGT...CCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGTGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp ATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCACAGCTGGTGTTCACTaGTTGGCCCTCCAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: MQRTPFGLRTLSGLTWVTTAGVH*LALQPA
Trigger: TGCCGGCTGGAGGGCCAACCAGTGAACACCAGCTGT...GGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTCAGGTTCTCAAAAAGTaGTGTAGACTCAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: SPQHSRTGERAAGLQARAQVLKK*CRLRQM
Trigger: CATTTGCCTGAGTCTACACCACTTTTTGAGAACCTG...AGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CAA 72 bp CACCCTTCACTGAAAGAGCTTTCTACCCCACGCCCATaGTTCCGAAGAAGGAGAGGCTATGTGGGGCGGATG +
Preference number: 4 (lower is better)
Translates to: HPSLKELSTPRP*FRRRRGYVGRM
Trigger: CATCCGCCCCACATAGCCTCTCCTTCTTCGGAACAATGGGCGTGGGGTAGAAAGCTCTTTCAGTGAAGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR TCA 90 bp AGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGGAGGGCCAATCAGATTaGGGGCTGTGTACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSCHHHSCPQWSLLLSCQEGQSD*GLCTSR
Trigger: CCTGGAAGTACACAGCCCTCAATCTGATTGGCCCTC...CTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTCGGCTTGCCCTGCCTTaGGATGCAGAATTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: QWSLLLSCQTYLLPPREARLALP*DAEFES
Trigger: GCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCG...AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGCAAGTGAGGCTGACCTaGCAAAGTCAAACGCACTGG +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVQVRLT*QSQTHW
Trigger: CCAGTGCGTTTGACTTTGTCAGGTCAGCCTCACTTG...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCTCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACTTTATGGGCCAACTGTaGAAGGGACAAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSLELSTARKVERPRTTHFMGQL*KGQVRL
Trigger: CAGCCTCACTTGTCCCTTTCACAGTTGGCCCATAAA...GTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp GGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCTCTCCCCACCAAGGTTTATGGGCCAACTGTaGAAGGGACAAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GGLANILPIPVNGLSPPRFMGQL*KGQVRL
Trigger: CAGCCTCACTTGTCCCTTTCACAGTTGGCCCATAAA...CCTTGGTGGGGAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR TCA 90 bp CTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCGTGCCCTGAGACCTGCATTTATGGGCCAACTGTaGAAGGGACAAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLQENGTQGRGTRALRPAFMGQL*KGQVRL
Trigger: CAGCCTCACTTGTCCCTTTCACAGTTGGCCCATAAA...TGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGCTGCCCTCTCCTCTTaGACAGCTAAGATGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEEAALSS*TAKMLG
Trigger: TCCAAGCATCTTAGCTGTTCAAGAGGAGAGGGCAGC...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAGTCCAGAATGCTCTaGTATCTGACACCGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QWSLLLSCQTYLLPPREAESRML*YLTPVV
Trigger: GACCACCGGTGTCAGATATCAGAGCATTCTGGACTC...AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGGGAGGACTGCCCAGAATGAGCTaGGACACAAGGCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: KLPSFLHRYCHQDGGKGGLPRMS*DTRQTL
Trigger: AAGGGTTTGCCTTGTGTCTCAGCTCATTCTGGGCAG...TCCTCCCTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CTGCCCTGGCCCAAAGGTCTGCTAATGGCTTCTGCAGGGAGGATGAGGATGGTGTCTCAATTCGGAGACTaGGAAGAGCGTAATACCCAG +
Preference number: 4 (lower is better)
Translates to: LPWPKGLLMASAGRMRMVSQFGD*EERNTQ
Trigger: CTGGGTATTACGCTCTTCGCAGTCTCCGAATTGAGA...CACCATCCTCATCCTCCCTGCAGAAGCCATTAGCAGACCTTTGGGCCAGGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR GCA 90 bp CATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGACTCCATTCTGCTTCTaGTGCAGGAGGGCGTCGCGA +
Preference number: 4 (lower is better)
Translates to: HHSCPQWSLLLSCQTYLLTPFCF*CRRASR
Trigger: TCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGT...CAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGCACTGCTGGTGGTCTTaGCAACATACTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVHCWWS*QHTAHS
Trigger: GGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTG...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAGTGAGCACTGCTGGTGGTCTTaGCAACATACTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: ACFCPVRHTSCHHEKLSEHCWWS*QHTAHS
Trigger: GGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTG...CTCACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCCACTGCTGGTGGTCTTaGCAACATACTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: LMSTVELASVLSDIPPATHCWWS*QHTAHS
Trigger: GGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTG...GGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGTCTGCTGTCACCACTTaGTCTTCCCCCGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSCHHHSCPQWSLLLSCQSAVTT*SSPVSS
Trigger: TGAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGA...CTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CTCGGAAAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGGTCAGACATACCTCCTaGCACCACGAGAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LGKLPSFLHRYCHQDGGKVRHTS*HHEKLS
Trigger: ACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGAC...CTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTTTCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAGTGAGGTCAGACATACCTCCTaGCACCACGAGAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ACFCPVRHTSCHHEKLSEVRHTS*HHEKLS
Trigger: ACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGAC...CTCACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GATGGTGCTAGGTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGCCTGCTGGTAATGCCTaGATCTGCCCAAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: DGARLTACLHYRPENVHAPAGNA*ICPRAC
Trigger: ACAGGCCCTTGGGCAGATGCAGGCATTACCAGCAGG...CGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAACCTAGCACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GGCACTTCTGGGCACCCACATTGTCTCCTGCTCCAGAGGATATGGAAGGGTGGGAGACAAGCAGTCTGTTaGTCAGAGGGGGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: GTSGHPHCLLLQRIWKGGRQAVC*SEGETD
Trigger: ATCAGTTTCCCCCTCTGAGCAACAGACTGCTTGTCT...CCCACCCTTCCATATCCTCTGGAGCAGGAGACAATGTGGGTGCCCAGAAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCGTGCCCTGAGACCTGCATATTCCTGCTGGATTTaGAGCCACGGCTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LLQENGTQGRGTRALRPAYSCWI*SHGSGS
Trigger: AGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATA...TGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTCTGGGCCTCCCAAAGTaGTGGGATTACAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: QWSLLLSCQTYLLPPREALGLPK*WDYRSK
Trigger: CTTACTCCTGTAATCCCAGCACTTTGGGAGGCCCAG...AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCTCTCCCCACCAAGGAGCTCGTATGCCCACTaGCCAGCACAGTTGACAAAA +
Preference number: 4 (lower is better)
Translates to: GGLANILPIPVNGLSPPRSSYAH*PAQLTK
Trigger: TTTTGTCAACTGTGCTGGCCAGTGGGCATACGAGCT...CCTTGGTGGGGAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565186.5
CDS-3UTR CCA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATTCTAGGTCTGAATCATaGTCGTCCAGGATGAACATG +
Preference number: 4 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNSRSES*SSRMNM
Trigger: CATGTTCATCCTGGACGACCATGATTCAGACCTAGA...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAAGCCCATTCCGGTAAATaGGCTCTCCCCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: IRHTATPPELIGCSKKMEAHSGK*ALPTKA
Trigger: GGCCTTGGTGGGGAGAGCCCATTTACCGGAATGGGC...TTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGTGTAGGCACTGCTGGTaGTCTTGCCAACATACTGCC +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEECRHCW*SCQHTA
Trigger: GGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACA...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGTGTAGGCACTGCTGGTaGTCTTGCCAACATACTGCC +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVCRHCW*SCQHTA
Trigger: GGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACA...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCTCCTTTCGGCGCTTCTaGGTGAAGAGGGAGGCGACA +
Preference number: 4 (lower is better)
Translates to: PPELIGCSKKMEPKGEGLSFRRF*VKREAT
Trigger: TGTCGCCTCCCTCTTCACCCAGAAGCGCCGAAAGGA...GAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGAGGTGAGGCTGCCCTaGTGGCATCACTTCCCATGT +
Preference number: 4 (lower is better)
Translates to: KQLSPSLMSTVELASVLSEVRLP*WHHFPC
Trigger: ACATGGGAAGTGATGCCACCAGGGCAGCCTCACCTC...TGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCCTGGAGAGTCAAACCTaGAATTCCGGCAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LMSTVELASVLSDIPPATLESQT*NSGSSL
Trigger: CAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAG...GGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGCTGGAGAGTCAAACCTaGAATTCCGGCAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEELESQT*NSGSSL
Trigger: CAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAG...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCAATATGGAAGGGTGGGTaGAGGGAAACAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPIWKGG*RETKSL
Trigger: CAGGCTCTTTGTTTCCCTCCACCCACCCTTCCATAT...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGCTCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACATATGGAAGGGTGGGTaGAGGGAAACAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: SSLELSTARKVERPRTTHIWKGG*RETKSL
Trigger: CAGGCTCTTTGTTTCCCTCCACCCACCCTTCCATAT...GTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGAAAAATTGTGCACAAAGCCCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTAAGCGCAGGGCACTTCTaGGCACCCACATTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RKIVHKAQANVALQAVAVSAGHF*APTLSP
Trigger: AGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCT...TACAGCTACAGCCTGGAGCGCCACGTTTGCCTGGGCTTTGTGCACAATTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CCA 90 bp GCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAGTGAGCCTCCTTATTCCTGCTaGATTTGCAGCCACGGCTCT +
Preference number: 4 (lower is better)
Translates to: ACFCPVRHTSCHHEKLSEPPYSC*ICSHGS
Trigger: AGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGG...CTCACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp ATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCAGGCCCACGGAAAACTaGCAACCCTGGGTCTCCGTT +
Preference number: 4 (lower is better)
Translates to: MQRTPFGLRTLSGLTWVTRPTEN*QPWVSV
Trigger: AACGGAGACCCAGGGTTGCCAGTTTTCCGTGGGCCT...GGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CTCGGAAAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGAACAGAAGTCACACGTaGCCTGACGATGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LGKLPSFLHRYCHQDGGKNRSHT*PDDEGE
Trigger: CTCCCCTTCATCGTCAGGCCACGTGTGACTTCTGTT...CTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTTTCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTAACAGAAGTCACACGTaGCCTGACGATGAAGGGGAG +
Preference number: 4 (lower is better)
Translates to: QWSLLLSCQTYLLPPREANRSHT*PDDEGE
Trigger: CTCCCCTTCATCGTCAGGCCACGTGTGACTTCTGTT...AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCGTGCCCTGAGACCTGCAGGGGACAGGGATCCCTaGAAGAGCGTGAAAAATACA +
Preference number: 4 (lower is better)
Translates to: LLQENGTQGRGTRALRPAGDRDP*KSVKNT
Trigger: TGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCC...TGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GATGGTGCTAGGTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGGCTATGTGGGGCGGATaGGAACCCACACACCGAGAT +
Preference number: 4 (lower is better)
Translates to: DGARLTACLHYRPENVHAAMWGG*EPTHRD
Trigger: ATCTCGGTGTGTGGGTTCCCATCCGCCCCACATAGC...CGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAACCTAGCACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTGAAGGAGAGGCTATGTaGGGCGGATGGGAACCCACA +
Preference number: 4 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVAEGEAM*GGWEPT
Trigger: TGTGGGTTCCCATCCGCCCCACATAGCCTCTCCTTC...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
3UTR CAA 72 bp AGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTaGCTTCTGTCCTGTCAGACATACCTCCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: SSCHHHSCPQWS*LLSCQTYLLPP
Trigger: TGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
3UTR CAA 72 bp CACCACCCCGGCTTGCCCTGCCTTGAGATGCAGAATTaGAAAGCAGCTGTCACCATCACTCATGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: HHPGLPCLEMQN*KAAVTITHVHS
Trigger: ACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR CAA 72 bp GAAACACTGAACGCTCTCGGAAAGCTCCCATCATTCTaGCATCGCTACTGCCACCAAGACGGTGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: ETLNALGKLPSF*HRYCHQDGGKG
Trigger: TCCCTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTTTCCGAGAGCGTTCAGTGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CAA 72 bp CGGTATCCCGCGATGTCAATCTCATACTCTCCCCGGTaGATGAAATCTGCTGTCACCACTTGCTCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: RYPAMSISYSPR*MKSAVTTCSSP
Trigger: GGGGGAAGAGCAAGTGGTGACAGCAGATTTCATCAACCGGGGAGAGTATGAGATTGACATCGCGGGATACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR TCA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCAATTCCAGGGGCGTGGTaGGGTTATTTATATCCTGAC +
Preference number: 4 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPIPGAW*GYLYPD
Trigger: GTCAGGATATAAATAACCTCACCACGCCCCTGGAAT...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR TCA 90 bp ATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCGGGCGTCGCGACCAATaGAATCCATGCCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: MQRTPFGLRTLSGLTWVTGRRDQ*NPCPSL
Trigger: TAGAGAAGGGCATGGATTTCATTGGTCGCGACGCCC...GGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCTCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACGGGAAAATGAAGCATTaGGGCTGGACAACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: SSLELSTARKVERPRTTHGKMKH*GWTTVH
Trigger: ATGGACTGTTGTCCAGCCTCAATGCTTCATTTTCCC...GTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCGTGCCCTGAGACCTGCAATCCCTGGAAGAGCGTaGAAAATACAGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LLQENGTQGRGTRALRPAIPGRA*KIQWSL
Trigger: CAGTGACCACTGTATTTTTCACGCTCTTCCAGGGAT...TGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCACTCCTGGGGCCAGAGTaGAACCGGGGTTTAATCACT +
Preference number: 4 (lower is better)
Translates to: KQLSPSLMSTVELASVLSLLGPE*NRGLIT
Trigger: AGTGATTAAACCCCGGTTTCACTCTGGCCCCAGGAG...TGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCCATTCAGCAAATATTTaGGGGTGGCTGGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: LMSTVELASVLSDIPPATHSANI*GWLGMV
Trigger: CACCATGCCCAGCCACCCTCAAATATTTGCTGAATG...GGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565186.5
CDS-3UTR GCA 90 bp CTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCTTATACACTCCATTCTaGTTCTGCTGCAGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LMSTVELASVLSDIPPATLYTPF*FCCRRA
Trigger: CGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAA...GGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGTTATACACTCCATTCTaGTTCTGCTGCAGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEELYTPF*FCCRRA
Trigger: CGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAA...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACTGCTGGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCTCTCCCCATTATACACTCCATTCTaGTTCTGCTGCAGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: TAGGLANILPIPVNGLSPLYTPF*FCCRRA
Trigger: CGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAA...TGGGGAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR GCA 90 bp GGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTTTATACACTCCATTCTaGTTCTGCTGCAGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: GKQRHCLKAQGTSGHPHCLYTPF*FCCRRA
Trigger: CGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAA...ACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCTGTAGCTGTAGGCACTaGTGGTGGTCTTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGCSCRH*WWSCQH
Trigger: ATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACA...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCTGTAGCTGTAGGCACTaGTGGTGGTCTTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: LMSTVELASVLSDIPPATCSCRH*WWSCQH
Trigger: ATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACA...GGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTGAGGTAGATAATCATCCTAACAGGAGAACGAGCTaGCGGGCTGCAGGCACGAGC +
Preference number: 4 (lower is better)
Translates to: RPENVHAMPLISEVDNHPNRRTS*RAAGTS
Trigger: GCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTT...AGGATGATTATCTACCTCACTGATAAGAGGCATCGCATGGACGTTCTCTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATGCCAGAGGTATCGAGTaGCAGCCCACAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: VNCLSPLQTRERPCDASYARGIE*QPTAQQ
Trigger: CTGCTGTGCTGTGGGCTGGCACTCGATACCTCTGGC...ATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCGCCAGAGGTATCGAGTaGCAGCCCACAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: MQNLKAAVTITHVHSGACARGIE*QPTAQQ
Trigger: CTGCTGTGCTGTGGGCTGGCACTCGATACCTCTGGC...GCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp TACACTCCATTCTGCTTCTGCTGCAGGAGGGCGTCGCGACCAATGAAATCCATGGGAAAACAGAGACACTaGCTGAAAGCGCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: YTPFCFCCRRASRPMKSMGKQRH*LKAQGT
Trigger: AGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC...CATGGATTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR GCA 90 bp ATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAAAGAGCAGAGGAGGCCTaGAGCTCTCAGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: IRHTATPPELIGCSKKMERAEEA*SSQSPV
Trigger: GACAGGTGACTGAGAGCTGCAGGCCTCCTCTGCTCT...TTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp TCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCAGAGGCAAAGCAGTTATaGCAGAAGCAGGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: SCPQWSLLLSCQTYLLPPEAKQL*QKQGRV
Trigger: GACTCTCCCCTGCTTCTGGCATAACTGCTTTGCCTC...TGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp ACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCGTGGTCAGGAAGTTATaGTGCCCTCTCCTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: TVELASVLSDIPPATTRSVVRKL*CPLLLN
Trigger: GTTCAAGAGGAGAGGGCAGCATAACTTCCTGACCAC...GCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCCTGTGCAGTTCTCTCTaGTGGAGCCTGTCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PPELIGCSKKMEPKGEGLLCSSL*WSLSCH
Trigger: ATGGCAGGACAGGCTCCAGCAGAGAGAACTGCACAG...GAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCTGTGCAGTTCTCTCTaGTGGAGCCTGTCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: HHSCPQWSLLLSCQTYLLLCSSL*WSLSCH
Trigger: ATGGCAGGACAGGCTCCAGCAGAGAGAACTGCACAG...CAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GGGGGAAAGGAGGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTTCTTGCATCGCTACTaGCACCAAGACGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GGKEEKRSLALCNVHPLDFLHRY*HQDGGK
Trigger: CTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAA...GTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCCTCCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCAGCTCCCATCATTCTTaGATCGCTACTGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: LMSTVELASVLSDIPPATSSHHS*IATATK
Trigger: CTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCT...GGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CCCGGCTTGCCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTTGGCTCACCACTTATTaGGTGTACACAAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PGLPCLEMQNLKAAVTITWLTTY*VYTRPG
Trigger: CCCAGGCCTTGTGTACACGCAATAAGTGGTGAGCCA...AGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR GCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGCTTGGTGGAGACAGTaGACAGTGTTAGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEEAWWRQ*TVLVPH
Trigger: ATGTGGCACTAACACTGTGCACTGTCTCCACCAAGC...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCAGCTCGTATGCCCACTaGCCAGCACAGTTGACAAAA +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGSSYAH*PAQLTK
Trigger: TTTTGTCAACTGTGCTGGCCAGTGGGCATACGAGCT...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAGCATCCACAATAGTTaGTGTGCTGCTCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SGACFCPVRHTSCHHEKLSIHNS*CAALQR
Trigger: CCTCTGCAGAGCAGCACACCAACTATTGTGGATGCT...CAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GGTGGCATCACTTCCCATGTAAGTCACTCAGCTCCATGTCATCCTTTCGGCGCTTGTAGGCACTGCTGGTaGTCTTGCCAACATACTGCC +
Preference number: 4 (lower is better)
Translates to: GGITSHVSHSAPCHPFGACRHCW*SCQHTA
Trigger: GGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACA...AGCGCCGAAAGGATGACATGGAGCTGAGTGACTTACATGGGAAGTGATGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGAGCTGTAGGCACTGCTaGTGGTCTTGCCAACATACT +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEESCRHC*WSCQHT
Trigger: AGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCT...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCAGCTTGGCCTTGGCCTaGAAGCGGTATCCCGCGATG +
Preference number: 4 (lower is better)
Translates to: MQNLKAAVTITHVHSGACSLALA*KRYPAM
Trigger: CATCGCGGGATACCGCTTCCAGGCCAAGGCCAAGCT...GCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCGGTAGAGCTTGGCCTTaGCCTGGAAGCGGTATCCCG +
Preference number: 4 (lower is better)
Translates to: MQNLKAAVTITHVHSGACGRAWP*PGSGIP
Trigger: CGGGATACCGCTTCCAGGCCAAGGCCAAGCTCTACC...GCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCGTGAGGCTGCCCTGGTaGCATCACTTCCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: TITHVHSGACFCPVRHTSVRLPW*HHFPCK
Trigger: CTTACATGGGAAGTGATGCCACCAGGGCAGCCTCAC...GGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGAAGCTGAGTGAGGGGTaGGAAGGGAAGAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: HTATPPELIGCSKKMEPKKLSEG*EGKKSP
Trigger: TGGGCTCTTCTTCCCTTCCCACCCCTCACTCAGCTT...CTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAGTGAGCACTCATGTCCACAGTaGAGCTTGCTTCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: ACFCPVRHTSCHHEKLSEHSCPQ*SLLLSC
Trigger: ACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTG...CTCACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp TGGCTTTGGAGGGGTGCAAATGCTACGTGTTTGGAAGAGCAGAGGAGGCCTGCACACTCATGTCCACAGTaGAGCTTGCTTCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: WLWRGANATCLEEQRRPAHSCPQ*SLLLSC
Trigger: ACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTG...TGCAGGCCTCCTCTGCTCTTCCAAACACGTAGCATTTGCACCCCTCCAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp ACTGCTGGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCTCTCCCCACAAAGTCAAACGCACTaGGAGAAGGGGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TAGGLANILPIPVNGLSPQSQTH*EKGKEE
Trigger: TTCCTCCTTCCCCTTCTCCCAGTGCGTTTGACTTTG...TGGGGAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CCA 90 bp CAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTCAAAGTCAAACGCACTaGGAGAAGGGGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: QWSLLLSCQTYLLPPREAQSQTH*EKGKEE
Trigger: TTCCTCCTTCCCCTTCTCCCAGTGCGTTTGACTTTG...AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GGCTGTAGCTGTAGGCACTGCTGGTGGTCTTGCCAACATACTGCCCATTCCGGTAGCTCTGCTCTGTGCTaGAGAGTCAAACCTGGAATT +
Preference number: 4 (lower is better)
Translates to: GCSCRHCWWSCQHTAHSGSSALC*RVKPGI
Trigger: AATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCT...ACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CCA 90 bp TCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGAGCTCTGCTCTGTGCTaGAGAGTCAAACCTGGAATT +
Preference number: 4 (lower is better)
Translates to: SLELSTARKVERPRTTHLSSALC*RVKPGI
Trigger: AATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCT...CAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGCAACGTACACCCTTTaGACTCAGAACTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEEATYTL*TQNSQW
Trigger: CCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGC...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGGCACTGCTGGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCTCTCGCAACGTACACCCTTTaGACTCAGAACTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: RHCWWSCQHTAHSGKWALATYTL*TQNSQW
Trigger: CCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGC...GAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CCA 90 bp CTCGGAAAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGGAGGATATGGAAGGGTaGGTGGAGGGAAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: LGKLPSFLHRYCHQDGGKEDMEG*VEGNKE
Trigger: CTCTTTGTTTCCCTCCACCCACCCTTCCATATCCTC...CTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTTTCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp ACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCGAGGATATGGAAGGGTaGGTGGAGGGAAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: TVELASVLSDIPPATTRSEDMEG*VEGNKE
Trigger: CTCTTTGTTTCCCTCCACCCACCCTTCCATATCCTC...GCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGCTCTCTGGAACTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACAGGAGCCAGCGTAAGTaGGTAAACAGAGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: SSLELSTARKVERPRTTHRSQRK*VNRDPK
Trigger: TTTGGGATCTCTGTTTACCCACTTACGCTGGCTCCT...GTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAGTTCCAGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp ACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCCAAGGCCTTCACAGCTaGTGTTCACTGGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: TITHVHSGACFCPVRHTSQGLHS*CSLVGP
Trigger: AGGGCCAACCAGTGAACACCAGCTGTGAAGGCCTTG...GGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp ACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCCAAATGCTACGTGTTTaGAAGAGCAGAGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TVELASVLSDIPPATTRSQMLRV*KSRGGL
Trigger: CAGGCCTCCTCTGCTCTTCCAAACACGTAGCATTTG...GCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp ACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCAATCACTGGGCTATGTaGTCTCTGTGTCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TVELASVLSDIPPATTRSNHWAM*SLCLWP
Trigger: AGGCCAGAGACACAGAGACCACATAGCCCAGTGATT...GCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp TGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACAGAACCAAACAGGAGTaGCCAGGCTCCACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CHHHSCPQWSLLLSCQTYRTKQE*PGSTPG
Trigger: CCCAGGAGTGGAGCCTGGCCACTCCTGTTTGGTTCT...GTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATAAGAACCAAACAGGAGTaGCCAGGCTCCACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSPSLMSTVELASVLSDIRTKQE*PGSTPG
Trigger: CCCAGGAGTGGAGCCTGGCCACTCCTGTTTGGTTCT...TATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GGTGGCATCACTTCCCATGTAAGTCACTCAGCTCCATGTCATCCTTTCGGCGCTCAGATTGAGGGCCGGTaGAGATCTGCCCAACCAAAA +
Preference number: 4 (lower is better)
Translates to: GGITSHVSHSAPCHPFGAQIEGR*RSAQPK
Trigger: TTTTGGTTGGGCAGATCTCCACCGGCCCTCAATCTG...AGCGCCGAAAGGATGACATGGAGCTGAGTGACTTACATGGGAAGTGATGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564563.1
CDS-3UTR TCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCAACAGAGGCTCAAAGTaGTCCCAGTCTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGNRGSK*SQSSCR
Trigger: TCTACAGGAAGACTGGGATCACTTTGAGCCTCTGTT...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp TGTAGCTCTGCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGAACAGAGGCTCAAAGTaGTCCCAGTCTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: CSSALCWRVKPGIPAALWNRGSK*SQSSCR
Trigger: TCTACAGGAAGACTGGGATCACTTTGAGCCTCTGTT...CCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp ATGAGGAGGCTGTGGTTGTCCCTCCTTATTCCTGCTGGATTTGCAGCCACGGCTCGGTTGGAGAGATCATaGAGAAACTGCGCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: MRRLWLSLLIPAGFAATARLERS*RNCACS
Trigger: TGAACAAGCGCAGTTTCTTCATGATCTCTCCAACCG...AGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACAGCCTCCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGATTCCAGGGGCGTGGTaGGGTTATTTATATCCTGAC +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVIPGAW*GYLYPD
Trigger: GTCAGGATATAAATAACCTCACCACGCCCCTGGAAT...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000567046.5
ENST00000568530.5
CDS-3UTR TCA 90 bp GGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCCCAGGACAACACACCTaGTCCCTTCCCCTCCCTATT +
Preference number: 4 (lower is better)
Translates to: GKAVSSLMQRTPFGLRTLPGQHT*SLPLPI
Trigger: AATAGGGAGGGGAAGGGATCAGGTGTGTTGTCCTGG...GAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp ATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAAAACAGAGACACTGCCTaGAAGCGCAGGGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: IRHTATPPELIGCSKKMENRDTA*KRRALL
Trigger: CAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTT...TTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGGGAAAATGAAGCATTaGGGCTGGACAACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: QWSLLLSCQTYLLPPREAGKMKH*GWTTVH
Trigger: ATGGACTGTTGTCCAGCCTCAATGCTTCATTTTCCC...AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCGTGCCCTGAGACCTGCATATGCAAGGGGAAAATaGAGCATTGAGGCTGGACAA +
Preference number: 4 (lower is better)
Translates to: LLQENGTQGRGTRALRPAYARGK*SIEAGQ
Trigger: TTGTCCAGCCTCAATGCTTCATTTTCCCCTTGCATA...TGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp GGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTCTCAGAGGGGGAAACTaGTGTCATTTAACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GKQRHCLKAQGTSGHPHCLRGGN*CHLTGG
Trigger: ACCTCCTGTTAAATGACATCAGTTTCCCCCTCTGAG...ACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGATCCCTTCCGAGCACAAAATGCTATaGCAGGTAATTGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LSTARKVERPRTTHLIPSEHKML*QVIAER
Trigger: TCTCTCTGCAATTACCTGTCATAGCATTTTGTGCTC...GGAAGGGATCAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CCTAGGTTCAGATGGCATACACCGACAAGAGAAGGCAGAGACCATCCTTCGTGGGACAGCAATGCAAGGTaGAAGGAGATCAAATGGCCC +
Preference number: 4 (lower is better)
Translates to: PRFRWHTPTREGRDHPSWDSNAR*KEIKWP
Trigger: GGGCCATTTGATCTCCTTTCACCTTGCATTGCTGTC...CCACGAAGGATGGTCTCTGCCTTCTCTTGTCGGTGTATGCCATCTGAACCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp GAGATGAAGAAAATTATAGGGAGGCTGCCCTGGCCCAAAGGTCTGCTAATGGCTAACTCCGGGTGTGCATaGGGAGATGATCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: EMKKIIGRLPWPKGLLMANSGCA*GDDPRP
Trigger: TGGCCTTGGATCATCTCCTCATGCACACCCGGAGTT...AGCCATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTATAATTTTCTTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCTTTCTACCCCACGCCCATTGTTCCGAAGAAGGAGAGGCTATGTGGGGCGGACTGAATCCATGTGCCTaGAATGACATATGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SFLPHAHCSEEGEAMWGGLNPCA*NDICKV
Trigger: CACCTTGCATATGTCATTTCAGGCACATGGATTCAG...TCCGCCCCACATAGCCTCTCCTTCTTCGGAACAATGGGCGTGGGGTAGAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR GCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGCCACACTCATCTCCTTaGAAAAGAGGCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVPHSSP*KRGLGS
Trigger: ACTTCCCAAGCCTCTTTTGCAAGGAGATGAGTGTGG...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGTCTCAATTCGGAGACTaGGAAGAGCGTAATACCCAG +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVSQFGD*EERNTQ
Trigger: CTGGGTATTACGCTCTTCGCAGTCTCCGAATTGAGA...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATACTCCATTCTGCTTCTaGTGCAGGAGGGCGTCGCGA +
Preference number: 4 (lower is better)
Translates to: VNCLSPLQTRERPCDASYTPFCF*CRRASR
Trigger: TCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGT...ATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTACTCCATTCTGCTTCTaGTGCAGGAGGGCGTCGCGA +
Preference number: 4 (lower is better)
Translates to: KAVSSLMQRTPFGLRTLSTPFCF*CRRASR
Trigger: TCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGT...ACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCCACTGCTGGTGGTCTTaGCAACATACTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: MQRTPFGLRTLSGLTWVTHCWWS*QHTAHS
Trigger: GGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTG...GGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CCCGGCTTGCCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTTGTAGCTGTAGGCACTaGTGGTGGTCTTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: PGLPCLEMQNLKAAVTITCSCRH*WWSCQH
Trigger: ATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACA...AGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGCCGGTTGATGAAATCTaGTGTCACCACTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEEPVDEI*CHHLLF
Trigger: GAAGAGCAAGTGGTGACAGCAGATTTCATCAACCGG...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCCCGGTTGATGAAATCTaGTGTCACCACTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGPVDEI*CHHLLF
Trigger: GAAGAGCAAGTGGTGACAGCAGATTTCATCAACCGG...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCGTCAGACATACCTCCTaGCACCACGAGAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TITHVHSGACFCPVRHTSVRHTS*HHEKLS
Trigger: ACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGAC...GGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTGTCAGACATACCTCCTaGCACCACGAGAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVAVRHTS*HHEKLS
Trigger: ACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGAC...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp TGGCAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTTGCACCACCCCGGCTTaGCCTGCCTTGAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: WQGRRLTFKCMQRQVIYCCTTPA*PALRCR
Trigger: TCTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCA...ACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp TCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGGTCTCTAGCCTTATaGAACGTACACCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: SCPQWSLLLSCQTYLLPPRSLAL*NVHPLD
Trigger: GTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCG...TGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGGGAGGAATGGCTTTGGAGGGGTaGAAATGCTACGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: KLPSFLHRYCHQDGGKGGMALEG*KCYVFG
Trigger: TCCAAACACGTAGCATTTGCACCCCTCCAAAGCCAT...TCCTCCCTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGAGGCAAAGCAGTTATaGCAGAAGCAGGGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: KQLSPSLMSTVELASVLSEAKQL*QKQGRV
Trigger: GACTCTCCCCTGCTTCTGGCATAACTGCTTTGCCTC...TGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCGTCCCTCCTTATTCCTaGTGGATTTGCAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: GKAVSSLMQRTPFGLRTLVPPYS*WICSHG
Trigger: GCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGAC...GAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGAACTCAGCATGCCATCATACAAGGTaGTGTGACAGCAATGCAAGG +
Preference number: 4 (lower is better)
Translates to: ALCWRVKPGIPAALWNSACHHTR*CDSNAR
Trigger: CCTTGCATTGCTGTCACAGCACCTTGTATGATGGCA...TGCTGAGTTCCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGAGCTGTAGGCACTGCTaGTGGTCTTGCCAACATACT +
Preference number: 4 (lower is better)
Translates to: SSCHHHSCPQWSLLLSCQSCRHC*WSCQHT
Trigger: AGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCT...CTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GAGATGAAGAAAATTATAGGGAGGCTGCCCTGGCCCAAAGGTCTGCTAATGGCTGTGAGGCTGCCCTGGTaGCATCACTTCCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: EMKKIIGRLPWPKGLLMAVRLPW*HHFPCK
Trigger: CTTACATGGGAAGTGATGCCACCAGGGCAGCCTCAC...AGCCATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTATAATTTTCTTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAAAAGCTGAGTGAGGGGTaGGAAGGGAAGAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: IRHTATPPELIGCSKKMEKLSEG*EGKKSP
Trigger: TGGGCTCTTCTTCCCTTCCCACCCCTCACTCAGCTT...TTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATAAAGCTGAGTGAGGGGTaGGAAGGGAAGAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LSPSLMSTVELASVLSDIKLSEG*EGKKSP
Trigger: TGGGCTCTTCTTCCCTTCCCACCCCTCACTCAGCTT...TATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAAGCTGAGTGAGGGGTaGGAAGGGAAGAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GKAVSSLMQRTPFGLRTLKLSEG*EGKKSP
Trigger: TGGGCTCTTCTTCCCTTCCCACCCCTCACTCAGCTT...GAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp TCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACACTCATGTCCACAGTaGAGCTTGCTTCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: SCPQWSLLLSCQTYLLPPHSCPQ*SLLLSC
Trigger: ACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTG...TGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATCAGATAGGGAGGCTGCCCTaGCCCAAAGGTCTGCTAATG +
Preference number: 4 (lower is better)
Translates to: NCLSPLQTRERPCDASYQIGRLP*PKGLLM
Trigger: CATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTAT...CTGATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCGTGCCCTGAGACCTGCATCAGACCCTTTTGACTaGGAAAAGCAACACACAAGG +
Preference number: 4 (lower is better)
Translates to: LLQENGTQGRGTRALRPASDPFD*EKQHTR
Trigger: CCTTGTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGA...TGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTCGGAAAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGAGGAGCCAGCGTAAGTaGGTAAACAGAGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: LGKLPSFLHRYCHQDGGKRSQRK*VNRDPK
Trigger: TTTGGGATCTCTGTTTACCCACTTACGCTGGCTCCT...CTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTTTCCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AAGTTTCACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGCCTCCTTATTCCTGCTaGATTTGCAGCCACGGCTCT +
Preference number: 4 (lower is better)
Translates to: KFHLGKTETLPESAGHFWPPYSC*ICSHGS
Trigger: AGAGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGG...CCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGTGAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGCTTGGAAATGACACATaGATGAGGAGGCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVLGNDT*MRRLWL
Trigger: CAACCACAGCCTCCTCATCCATGTGTCATTTCCAAG...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTCTCCTGACTCTTCATGTTTCATaGACAAAGGGAAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QRHCLKAQGTSGHPHCLLTLHVS*TKGRQR
Trigger: CCTTTGCCTTCCCTTTGTCCATGAAACATGAAGAGT...CAGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp CATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCAGATTGAGGGCCGGTaGAGATCTGCCCAACCAAAA +
Preference number: 4 (lower is better)
Translates to: HHSCPQWSLLLSCQTYLLQIEGR*RSAQPK
Trigger: TTTTGGTTGGGCAGATCTCCACCGGCCCTCAATCTG...CAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000567046.5
CDS-3UTR TCA 90 bp ATCTCTTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGCGGCTTGCCCTGCCTTaGGATGCAGAATTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: ISSMSGDRDPWKSVKNTVRLALP*DAEFES
Trigger: GCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCG...CACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAAGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp GGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCCAAGTGAGGCTGACCTaGCAAAGTCAAACGCACTGG +
Preference number: 4 (lower is better)
Translates to: GKAVSSLMQRTPFGLRTLQVRLT*QSQTHW
Trigger: CCAGTGCGTTTGACTTTGTCAGGTCAGCCTCACTTG...GAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp ATGAGGAGGCTGTGGTTGTCCCTCCTTATTCCTGCTGGATTTGCAGCCACGGCTTCAGTCTTAGGAGTATaGCCCTATTCATGGACAAGG +
Preference number: 4 (lower is better)
Translates to: MRRLWLSLLIPAGFAATASVLGV*PYSWTR
Trigger: CCTTGTCCATGAATAGGGTCATACTCCTAAGACTGA...AGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACAGCCTCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCTTTCTACCCCACGCCCATTGTTCCGAAGAAGGAGAGGCTATGTGGGGCGGACACACAGCTTGTATTTaGATGAACCAGGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: SFLPHAHCSEEGEAMWGGHTACI*MNQERL
Trigger: AAGTCTCTCCTGGTTCATTCAAATACAAGCTGTGTG...TCCGCCCCACATAGCCTCTCCTTCTTCGGAACAATGGGCGTGGGGTAGAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR TCA 90 bp GAGATGAAGAAAATTATAGGGAGGCTGCCCTGGCCCAAAGGTCTGCTAATGGCTCTGCCCAGAATGAGCTaGGACACAAGGCAAACCCTT +
Preference number: 4 (lower is better)
Translates to: EMKKIIGRLPWPKGLLMALPRMS*DTRQTL
Trigger: AAGGGTTTGCCTTGTGTCTCAGCTCATTCTGGGCAG...AGCCATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTATAATTTTCTTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACACGTGCTGCCCAGAATaGGCTGAGACACAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PCLEMQNLKAAVTITHVHTCCPE*AETQGK
Trigger: TTTGCCTTGTGTCTCAGCTCATTCTGGGCAGCACGT...GTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGCAACTGTGCTTCTCCTaGATCCATGTGCCTGAAATG +
Preference number: 4 (lower is better)
Translates to: SSCHHHSCPQWSLLLSCQQLCFS*IHVPEM
Trigger: CATTTCAGGCACATGGATTCAGGAGAAGCACAGTTG...CTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR TCA 90 bp ACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCGACAAACACAAACGATaGGTCACAGGACTCTACAGT +
Preference number: 4 (lower is better)
Translates to: TVELASVLSDIPPATTRSDKHKR*VTGLYS
Trigger: ACTGTAGAGTCCTGTGACTCATCGTTTGTGTTTGTC...GCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR GCA 90 bp AGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTGAGGTAGATAATCATCCTAGCCAGCAGCCAGCCTaGCCTGCTCCAAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: RPENVHAMPLISEVDNHPSQQPA*PAPKGQ
Trigger: TTGTCCTTTTGGAGCAGGGCAGGCTGGCTGCTGGCT...AGGATGATTATCTACCTCACTGATAAGAGGCATCGCATGGACGTTCTCTGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AGGCACTGCTGGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGGCTCTCACTTCATTGTATACATaGAGGGCGTACTCTATGGGG +
Preference number: 4 (lower is better)
Translates to: RHCWWSCQHTAHSGKWALTSLYT*RAYSMG
Trigger: CCCCATAGAGTACGCCCTGCATGTATACAATGAAGT...GAGAGCCCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564563.1
CDS-3UTR GCA 90 bp ACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCACTTCATTGTATACATaGAGGGCGTACTCTATGGGG +
Preference number: 4 (lower is better)
Translates to: TVELASVLSDIPPATTRSTSLYT*RAYSMG
Trigger: CCCCATAGAGTACGCCCTGCATGTATACAATGAAGT...GCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GGGGGAAAGGAGGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCTCAATTCGGAGACTaGGAAGAGCGTAATACCCAG +
Preference number: 4 (lower is better)
Translates to: GGKEEKRSLALCNVHPLDSQFGD*EERNTQ
Trigger: CTGGGTATTACGCTCTTCGCAGTCTCCGAATTGAGA...GTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCCTCCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR GCA 90 bp ATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTTATACACTCCATTCTaGTTCTGCTGCAGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: MQRTPFGLRTLSGLTWVTLYTPF*FCCRRA
Trigger: CGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTATAA...GGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGTAGCTGTAGGCACTaGTGGTGGTCTTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: TITHVHSGACFCPVRHTSCSCRH*WWSCQH
Trigger: ATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACA...GGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGTCCTCAGAAAAATTGTaGACAAAGCCCAGGCAAACG +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVSSEKL*TKPRQT
Trigger: CGTTTGCCTGGGCTTTGTGCACAATTTTTCTGAGGA...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTTCCTCAGAAAAATTGTaGACAAAGCCCAGGCAAACG +
Preference number: 4 (lower is better)
Translates to: GKQRHCLKAQGTSGHPHCSSEKL*TKPRQT
Trigger: CGTTTGCCTGGGCTTTGTGCACAATTTTTCTGAGGA...ACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGTCCTCAGAAAAATTGTaGACAAAGCCCAGGCAAACG +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEESSEKL*TKPRQT
Trigger: CGTTTGCCTGGGCTTTGTGCACAATTTTTCTGAGGA...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCTCCTCAGAAAAATTGTaGACAAAGCCCAGGCAAACG +
Preference number: 4 (lower is better)
Translates to: LMSTVELASVLSDIPPATSSEKL*TKPRQT
Trigger: CGTTTGCCTGGGCTTTGTGCACAATTTTTCTGAGGA...GGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTTCTGCTGTCACCACTTaGTCTTCCCCCGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: KAVSSLMQRTPFGLRTLSSAVTT*SSPVSS
Trigger: TGAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGA...ACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CCTAGGTTCAGATGGCATACACCGACAAGAGAAGGCAGAGACCATCCTTCGTGGCCGGTTGATGAAATCTaGTGTCACCACTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PRFRWHTPTREGRDHPSWPVDEI*CHHLLF
Trigger: GAAGAGCAAGTGGTGACAGCAGATTTCATCAACCGG...CCACGAAGGATGGTCTCTGCCTTCTCTTGTCGGTGTATGCCATCTGAACCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GGTGGCATCACTTCCCATGTAAGTCACTCAGCTCCATGTCATCCTTTCGGCGCTCCGGTTGATGAAATCTaGTGTCACCACTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GGITSHVSHSAPCHPFGAPVDEI*CHHLLF
Trigger: GAAGAGCAAGTGGTGACAGCAGATTTCATCAACCGG...AGCGCCGAAAGGATGACATGGAGCTGAGTGACTTACATGGGAAGTGATGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR GCA 90 bp AACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATCAGGTCAGACATACCTCCTaGCACCACGAGAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: NCLSPLQTRERPCDASYQVRHTS*HHEKLS
Trigger: ACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGAC...CTGATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGCCAGAACTAATAGGCTaGTCCAAGAAAATGGAACCC +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEEPELIG*SKKMEP
Trigger: GGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGG...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AACAGGAGGTCAGGATTTCTGGTTCTACTTCAACAAACAGTGCATAATTTTGGAAACGAGCTGCCGGGCTaGAGGCACGAGCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: NRRSGFLVLLQQTVHNFGNELPG*RHELPL
Trigger: GAGGGGCAGCTCGTGCCTGCAGCCCGGCAGCTCGTT...TCCAAAATTATGCACTGTTTGTTGAAGTAGAACCAGAAATCCTGACCTCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTAACGAGCTGCCGGGCTaGAGGCACGAGCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QHTRQYGFSLSNTVAYLFNELPG*RHELPL
Trigger: GAGGGGCAGCTCGTGCCTGCAGCCCGGCAGCTCGTT...AAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTTGTAGCTCTGCTCTGTaGTGGAGAGTCAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVACSSAL*WRVKPG
Trigger: TCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGTAGCTCTGCTCTGTaGTGGAGAGTCAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: TITHVHSGACFCPVRHTSCSSAL*WRVKPG
Trigger: TCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA...GGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCCGGTCTCTAGCCTTATaGAACGTACACCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: PPELIGCSKKMEPKGEGLRSLAL*NVHPLD
Trigger: GTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCG...GAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCGGTCTCTAGCCTTATaGAACGTACACCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: HHSCPQWSLLLSCQTYLLRSLAL*NVHPLD
Trigger: GTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCG...CAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCACCCACATTGTCTCCTaGTCCAGAGGATATGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPELIGCSKKMEPKGEGLTHIVS*SRGYGR
Trigger: CCTTCCATATCCTCTGGAGCAGGAGACAATGTGGGT...GAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CCCGGCTTGCCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTTTGGAGGGGTGCAAATaGTACGTGTTTGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PGLPCLEMQNLKAAVTITLEGCK*YVFGRA
Trigger: TGCTCTTCCAAACACGTAGCATTTGCACCCCTCCAA...AGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTTATTCCTGCTGGATTTaGAGCCACGGCTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVAYSCWI*SHGSGS
Trigger: AGATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATA...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GATGGTGCTAGGTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGGCTGTGGTTGCCACTTaGAAAAGAGGCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: DGARLTACLHYRPENVHAAVVAT*KRGLGS
Trigger: ACTTCCCAAGCCTCTTTTGCAAGTGGCAACCACAGC...CGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAACCTAGCACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564563.1
CDS-3UTR CCA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCCGGATTCCGTATTTCTaGCCAACACTCATCACTTCA +
Preference number: 4 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGRIPYF*PTLITS
Trigger: TGAAGTGATGAGTGTTGGCCAGAAATACGGAATCCG...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGCGGATTCCGTATTTCTaGCCAACACTCATCACTTCA +
Preference number: 4 (lower is better)
Translates to: SGACFCPVRHTSCHHEKLRIPYF*PTLITS
Trigger: TGAAGTGATGAGTGTTGGCCAGAAATACGGAATCCG...CAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGTCTAGGTCTGAATCATaGTCGTCCAGGATGAACATG +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEESRSES*SSRMNM
Trigger: CATGTTCATCCTGGACGACCATGATTCAGACCTAGA...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTCGGAAAGCTCCCATCATTCTTGCATCGCTACTGCCACCAAGACGGTGGCAAGTCTAGGTCTGAATCATaGTCGTCCAGGATGAACATG +
Preference number: 4 (lower is better)
Translates to: LGKLPSFLHRYCHQDGGKSRSES*SSRMNM
Trigger: CATGTTCATCCTGGACGACCATGATTCAGACCTAGA...CTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTTTCCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTGAGGTAGATAATCATCCTGAGGTGAGGCTGCCCTaGTGGCATCACTTCCCATGT +
Preference number: 4 (lower is better)
Translates to: RPENVHAMPLISEVDNHPEVRLP*WHHFPC
Trigger: ACATGGGAAGTGATGCCACCAGGGCAGCCTCACCTC...AGGATGATTATCTACCTCACTGATAAGAGGCATCGCATGGACGTTCTCTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGAAAAATTGTGCACAAAGCCCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTACACTCATGTCCACAGTaGAGCTTGCTTCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: RKIVHKAQANVALQAVAVHSCPQ*SLLLSC
Trigger: ACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTG...TACAGCTACAGCCTGGAGCGCCACGTTTGCCTGGGCTTTGTGCACAATTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CCA 90 bp ACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCCACTCATGTCCACAGTaGAGCTTGCTTCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: TITHVHSGACFCPVRHTSHSCPQ*SLLLSC
Trigger: ACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTG...GGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCACAAAGTCAAACGCACTaGGAGAAGGGGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: KQLSPSLMSTVELASVLSQSQTH*EKGKEE
Trigger: TTCCTCCTTCCCCTTCTCCCAGTGCGTTTGACTTTG...TGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCGTGCCCTGAGACCTGCAAGAAACATGACTTTATaGGCCAACTGTGAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: LLQENGTQGRGTRALRPARNMTL*ANCERD
Trigger: GTCCCTTTCACAGTTGGCCCATAAAGTCATGTTTCT...TGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACTGGAGAGTCAAACCTaGAATTCCGGCAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LSPSLMSTVELASVLSDILESQT*NSGSSL
Trigger: CAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAG...TATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCCTGGAGAGTCAAACCTaGAATTCCGGCAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: GKAVSSLMQRTPFGLRTLLESQT*NSGSSL
Trigger: CAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAG...GAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCATATGGAAGGGTGGGTaGAGGGAAACAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PPELIGCSKKMEPKGEGLIWKGG*RETKSL
Trigger: CAGGCTCTTTGTTTCCCTCCACCCACCCTTCCATAT...GAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTTTACAAAGATGGCTTTaGAGGGGTGCAAATGCTACG +
Preference number: 4 (lower is better)
Translates to: GKQRHCLKAQGTSGHPHCLQRWL*RGANAT
Trigger: CGTAGCATTTGCACCCCTCCAAAGCCATCTTTGTAA...ACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp TGGCAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTCTGCCACCAAGACGGTaGCAAGGGAGGAGGCTAACT +
Preference number: 4 (lower is better)
Translates to: WQGRRLTFKCMQRQVIYCLPPRR*QGRRLT
Trigger: AGTTAGCCTCCTCCCTTGCCACCGTCTTGGTGGCAG...ACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp ACCCAAAGTCACCCAGGATCTCTAGAAAAGATCCCACTTACTGAAGTGCCTCGGAGCACCTTAAATTGTTaGCCTGAAGTGGTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TQSHPGSLEKIPLTEVPRSTLNC*PEVVAG
Trigger: CCCCGCCACCACTTCAGGCCAACAATTTAAGGTGCT...CCGAGGCACTTCAGTAAGTGGGATCTTTTCTAGAGATCCTGGGTGACTTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp GTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCAGTGGAAACCTTGCTTaGTGGAGACAGTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: VTITHVHSGACFCPVRHTSGNLA*WRQCTV
Trigger: CACTGTGCACTGTCTCCACCAAGCAAGGTTTCCACT...GGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp CCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCCCCACACTCATCTCCTaGAAGTTGCTCGTTACAGGT +
Preference number: 4 (lower is better)
Translates to: PPELIGCSKKMEPKGEGLPTLIS*KLLVTG
Trigger: ACCTGTAACGAGCAACTTCCAGGAGATGAGTGTGGG...GAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564563.1
CDS-3UTR TCA 90 bp GATGGTGCTAGGTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATTCCAGGGGCGTGGTaGGGTTATTTATATCCTGAC +
Preference number: 4 (lower is better)
Translates to: DGARLTACLHYRPENVHAIPGAW*GYLYPD
Trigger: GTCAGGATATAAATAACCTCACCACGCCCCTGGAAT...CGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAACCTAGCACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR TCA 90 bp TTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGTCACATTCCAGGGGCGTGGTaGGGTTATTTATATCCTGAC +
Preference number: 4 (lower is better)
Translates to: FNVGGQGSLEEREKYSGHIPGAW*GYLYPD
Trigger: GTCAGGATATAAATAACCTCACCACGCCCCTGGAAT...GTGACCACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp TGGCAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGGGCGTCGCGACCAATaGAATCCATGCCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: WQGRRLTFKCMQRQVIYCGRRDQ*NPCPSL
Trigger: TAGAGAAGGGCATGGATTTCATTGGTCGCGACGCCC...ACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AGAAAAATTGTGCACAAAGCCCAGGCAAACGTGGCGCTCCAGGCTGTAGCTGTAAAGGTCAGACCCTTTTaGCTGGGAAAAGCAACACAC +
Preference number: 4 (lower is better)
Translates to: RKIVHKAQANVALQAVAVKVRPF*LGKATH
Trigger: GTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGACCTT...TACAGCTACAGCCTGGAGCGCCACGTTTGCCTGGGCTTTGTGCACAATTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR TCA 90 bp TGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACTTTATGGGCCAACTGTaGAAGGGACAAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CHHHSCPQWSLLLSCQTYFMGQL*KGQVRL
Trigger: CAGCCTCACTTGTCCCTTTCACAGTTGGCCCATAAA...GTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGCTGGACAACAGTCCATaGTATCTAAGTTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: SGACFCPVRHTSCHHEKLLDNSP*YLSFTL
Trigger: CAAGGTGAAACTTAGATATCATGGACTGTTGTCCAG...CAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp GCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAGTGAGGATCCTGGTAAGTGGTaGTACTGCTATGTAACAGTT +
Preference number: 4 (lower is better)
Translates to: ACFCPVRHTSCHHEKLSEDPGKW*YCYVTV
Trigger: AACTGTTACATAGCAGTATCACCACTTACCAGGATC...CTCACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp TGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACGAATGCTCTGATATCTaGCACCGGTGGTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: CHHHSCPQWSLLLSCQTYECSDI*HRWSGS
Trigger: ACTTCCTGACCACCGGTGTCAGATATCAGAGCATTC...GTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp TGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACGCAAACCCTTGGAAATaGCACATGGATGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CHHHSCPQWSLLLSCQTYANPWK*HMDEEA
Trigger: AGCCTCCTCATCCATGTGTCATTTCCAAGGGTTTGC...GTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp ATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAAGCAAACCCTTGGAAATaGCACATGGATGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: IRHTATPPELIGCSKKMEANPWK*HMDEEA
Trigger: AGCCTCCTCATCCATGTGTCATTTCCAAGGGTTTGC...TTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp TCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCAGAAGGAACATCTTCCTaGTGCAAGCTTAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: SCPQWSLLLSCQTYLLPPEGTSS*CKLRWK
Trigger: CTTCCATCTAAGCTTGCATCAGGAAGATGTTCCTTC...TGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTGCTCTTCAGAGTTCCTaGATGAGAGCTTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVAALQSS*MRAFLA
Trigger: AGCCAGAAAAGCTCTCATTCAGGAACTCTGAAGAGC...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATAGACAGCAATGCAAGGTaGAAGGAGATCAAATGGCCC +
Preference number: 4 (lower is better)
Translates to: LSPSLMSTVELASVLSDIDSNAR*KEIKWP
Trigger: GGGCCATTTGATCTCCTTTCACCTTGCATTGCTGTC...TATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CCTAGGTTCAGATGGCATACACCGACAAGAGAAGGCAGAGACCATCCTTCGTGGTCATACAAGGTGCTGTaGCAGCAATGCAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: PRFRWHTPTREGRDHPSWSYKVL*QQCKVK
Trigger: TTTCACCTTGCATTGCTGTCACAGCACCTTGTATGA...CCACGAAGGATGGTCTCTGCCTTCTCTTGTCGGTGTATGCCATCTGAACCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp TCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCATCATACAAGGTGCTGTaGCAGCAATGCAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SCPQWSLLLSCQTYLLPPSYKVL*QQCKVK
Trigger: TTTCACCTTGCATTGCTGTCACAGCACCTTGTATGA...TGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp TTTCAGGTTCTCAAAAAGTGGTGTAGACTCAGGCAAATGCCAGGAAATGTGTCCGTGTGCATGAGGAGATaGTCCAAGGCCAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FQVLKKWCRLRQMPGNVSVCMRR*SKASGP
Trigger: AGGCCCACTGGCCTTGGATCATCTCCTCATGCACAC...GGACACATTTCCTGGCATTTGCCTGAGTCTACACCACTTTTTGAGAACCTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGTCTCAGGAACTCAAATaGCCTGTCCCAGATTTTTCT +
Preference number: 4 (lower is better)
Translates to: SGACFCPVRHTSCHHEKLSQELK*PVPDFS
Trigger: AGAAAAATCTGGGACAGGGCATTTGAGTTCCTGAGA...CAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGCCACACTCATCTCCTTaGAAAAGAGGCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: HTATPPELIGCSKKMEPKPHSSP*KRGLGS
Trigger: ACTTCCCAAGCCTCTTTTGCAAGGAGATGAGTGTGG...CTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTGTAGCTGTAGGCACTaGTGGTGGTCTTGCCAACAT +
Preference number: 4 (lower is better)
Translates to: NCLSPLQTRERPCDASYQCSCRH*WWSCQH
Trigger: ATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACA...CTGATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CTCATACTCTCCCCGGTTGATGAAATCTGCTGTCACCACTTGCTCTTCCCCCGTTCCTCAGAAAAATTGTaGACAAAGCCCAGGCAAACG +
Preference number: 4 (lower is better)
Translates to: LILSPVDEICCHHLLFPRSSEKL*TKPRQT
Trigger: CGTTTGCCTGGGCTTTGTGCACAATTTTTCTGAGGA...ACGGGGGAAGAGCAAGTGGTGACAGCAGATTTCATCAACCGGGGAGAGTATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR GCA 90 bp AGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTGAGGTAGATAATCATCCTTCTGCTGTCACCACTTaGTCTTCCCCCGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RPENVHAMPLISEVDNHPSAVTT*SSPVSS
Trigger: TGAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGA...AGGATGATTATCTACCTCACTGATAAGAGGCATCGCATGGACGTTCTCTGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CCTAGGTTCAGATGGCATACACCGACAAGAGAAGGCAGAGACCATCCTTCGTGGCCAGAACTAATAGGCTaGTCCAAGAAAATGGAACCC +
Preference number: 4 (lower is better)
Translates to: PRFRWHTPTREGRDHPSWPELIG*SKKMEP
Trigger: GGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGG...CCACGAAGGATGGTCTCTGCCTTCTCTTGTCGGTGTATGCCATCTGAACCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCTGTAGCTCTGCTCTGTaGTGGAGAGTCAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: GKAVSSLMQRTPFGLRTLCSSAL*WRVKPG
Trigger: TCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA...GAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTGGAAAACAGAGACACTaGCTGAAAGCGCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: KAVSSLMQRTPFGLRTLSGKQRH*LKAQGT
Trigger: AGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC...ACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp TTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGTCACAGACAAGCAGTCTGTTaGTCAGAGGGGGAAACTGAT +
Preference number: 4 (lower is better)
Translates to: FNVGGQGSLEEREKYSGHRQAVC*SEGETD
Trigger: ATCAGTTTCCCCCTCTGAGCAACAGACTGCTTGTCT...GTGACCACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATCAGGTCAGGAAGTTATGCTaGCCTCTCCTCTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: NCLSPLQTRERPCDASYQVRKLC*PLLLNS
Trigger: GCTGTTCAAGAGGAGAGGGCAGCATAACTTCCTGAC...CTGATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGGAGATGCAGACACTCTaGTCAGAGAAGTCAAGAACC +
Preference number: 4 (lower is better)
Translates to: HHSCPQWSLLLSCQTYLLEMQTL*SEKSRT
Trigger: GGTTCTTGACTTCTCTGAGCAGAGTGTCTGCATCTC...CAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGATGCCTGATCCCCAGTaGATGTTATCTCAAACTTTG +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVMPDPQ*MLSQTL
Trigger: CAAAGTTTGAGATAACATCCACTGGGGATCAGGCAT...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATTGTAGGCACTGCTGGTaGTCTTGCCAACATACTGCC +
Preference number: 4 (lower is better)
Translates to: VNCLSPLQTRERPCDASYCRHCW*SCQHTA
Trigger: GGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACA...ATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATAAGCTGTAGGCACTGCTaGTGGTCTTGCCAACATACT +
Preference number: 4 (lower is better)
Translates to: LSPSLMSTVELASVLSDISCRHC*WSCQHT
Trigger: AGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCT...TATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GAGATGAAGAAAATTATAGGGAGGCTGCCCTGGCCCAAAGGTCTGCTAATGGCTAGCTGTAGGCACTGCTaGTGGTCTTGCCAACATACT +
Preference number: 4 (lower is better)
Translates to: EMKKIIGRLPWPKGLLMASCRHC*WSCQHT
Trigger: AGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCT...AGCCATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTATAATTTTCTTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGGGAACGGCTGAACTTTaGACAGCTGAGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: HTATPPELIGCSKKMEPKGTAEL*TAERKA
Trigger: TGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCC...CTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACAAAGTCAAACGCACTaGGAGAAGGGGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LSPSLMSTVELASVLSDIQSQTH*EKGKEE
Trigger: TTCCTCCTTCCCCTTCTCCCAGTGCGTTTGACTTTG...TATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATCAGACTCAGAACTCTCAGTaGACTAACGTGGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: NCLSPLQTRERPCDASYQTQNSQ*TNVGHL
Trigger: GAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGT...CTGATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATAGCAACGTACACCCTTTaGACTCAGAACTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: LSPSLMSTVELASVLSDIATYTL*TQNSQW
Trigger: CCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGC...TATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GCTAGAACACCCTTCACTGAAAGAGCTTTCTACCCCACGCCCATTGTTCCGAAGCTTGGAAATGACACATaGATGAGGAGGCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ARTPFTERAFYPTPIVPKLGNDT*MRRLWL
Trigger: CAACCACAGCCTCCTCATCCATGTGTCATTTCCAAG...CTTCGGAACAATGGGCGTGGGGTAGAAAGCTCTTTCAGTGAAGGGTGTTCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp ATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCCCAATATGGAGACTGTaGGCCACAGAAGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: MQRTPFGLRTLSGLTWVTPIWRL*ATEDSL
Trigger: AAGGGAATCTTCTGTGGCCCACAGTCTCCATATTGG...GGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CAA 72 bp AAGGCCCACGGAAAACTGGCAACCCTGGGTCTCCGTTaGAGGCCAATATACTTTGTGTTCCTAGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: KAHGKLATLGLR*RPIYFVFLGSD
Trigger: ATCTGAACCTAGGAACACAAAGTATATTGGCCTCAAACGGAGACCCAGGGTTGCCAGTTTTCCGTGGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp GGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAACAGAGGCTCAAAGTaGTCCCAGTCTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: GKAVSSLMQRTPFGLRTLNRGSK*SQSSCR
Trigger: TCTACAGGAAGACTGGGATCACTTTGAGCCTCTGTT...GAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp GAGATGAAGAAAATTATAGGGAGGCTGCCCTGGCCCAAAGGTCTGCTAATGGCTAACAGAGGCTCAAAGTaGTCCCAGTCTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: EMKKIIGRLPWPKGLLMANRGSK*SQSSCR
Trigger: TCTACAGGAAGACTGGGATCACTTTGAGCCTCTGTT...AGCCATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTATAATTTTCTTCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp TGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACATTCCAGGGGCGTGGTaGGGTTATTTATATCCTGAC +
Preference number: 4 (lower is better)
Translates to: CHHHSCPQWSLLLSCQTYIPGAW*GYLYPD
Trigger: GTCAGGATATAAATAACCTCACCACGCCCCTGGAAT...GTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000567046.5
ENST00000568530.5
CDS-3UTR TCA 90 bp TCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCATTGAGATGCAGAATTTaGAAGCAGCTGTCACCATCA +
Preference number: 4 (lower is better)
Translates to: SCPQWSLLLSCQTYLLPPLRCRI*KQLSPS
Trigger: TGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAA...TGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGCTGGACAACAGTCCATaGTATCTAAGTTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: SSCHHHSCPQWSLLLSCQLDNSP*YLSFTL
Trigger: CAAGGTGAAACTTAGATATCATGGACTGTTGTCCAG...CTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGGAGCTGCCCTCTCCTCTTaGACAGCTAAGATGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QGRRLTFKCMQRQVIYCGAALSS*TAKMLG
Trigger: TCCAAGCATCTTAGCTGTTCAAGAGGAGAGGGCAGC...TCCACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp GTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCGAAGGAACATCTTCCTaGTGCAAGCTTAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: VTITHVHSGACFCPVRHTEGTSS*CKLRWK
Trigger: CTTCCATCTAAGCTTGCATCAGGAAGATGTTCCTTC...GGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp GGAAAACTGGCAACCCTGGGTCTCCGTTTGAGGCCAATATACTTTGTGTTCCTATCTTCAGTGAAACACTaGACGCTCTCGGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GKLATLGLRLRPIYFVFLSSVKH*TLSESS
Trigger: GGAGCTTTCCGAGAGCGTTCAGTGTTTCACTGAAGA...TAGGAACACAAAGTATATTGGCCTCAAACGGAGACCCAGGGTTGCCAGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp TTTCAGGTTCTCAAAAAGTGGTGTAGACTCAGGCAAATGCCAGGAAATGTGTCCGGGTCCTGTCTTCAGTaGAACACTGAACGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: FQVLKKWCRLRQMPGNVSGSCLQ*NTERSR
Trigger: CCGAGAGCGTTCAGTGTTTCACTGAAGACAGGACCC...GGACACATTTCCTGGCATTTGCCTGAGTCTACACCACTTTTTGAGAACCTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGAAAGAAGACCCTTATTaGCTACACTGGCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: HTATPPELIGCSKKMEPKKEDPY*LHWPRS
Trigger: GCTTCTTGGCCAGTGTAGTCAATAAGGGTCTTCTTT...CTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACAAACCCAGTAACATaGGAAGAAACTCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LMSTVELASVLSDIPPATTNPVT*EETQWK
Trigger: TTTCCACTGAGTTTCTTCTCATGTTACTGGGTTTGT...GGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR GCA 90 bp CCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACCCACACTCATCTCCTTaGAAAAGAGGCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PCLEMQNLKAAVTITHVHPHSSP*KRGLGS
Trigger: ACTTCCCAAGCCTCTTTTGCAAGGAGATGAGTGTGG...GTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTACTTCATTGTATACATaGAGGGCGTACTCTATGGGG +
Preference number: 4 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVATSLYT*RAYSMG
Trigger: CCCCATAGAGTACGCCCTGCATGTATACAATGAAGT...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR GCA 90 bp TGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACTCTCAATTCGGAGACTaGGAAGAGCGTAATACCCAG +
Preference number: 4 (lower is better)
Translates to: CHHHSCPQWSLLLSCQTYSQFGD*EERNTQ
Trigger: CTGGGTATTACGCTCTTCGCAGTCTCCGAATTGAGA...GTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCCCAGAACTAATAGGCTaGTCCAAGAAAATGGAACCC +
Preference number: 4 (lower is better)
Translates to: TITHVHSGACFCPVRHTSPELIG*SKKMEP
Trigger: GGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGG...GGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGGAGGAAAACAGAGACACTaGCTGAAAGCGCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: QGRRLTFKCMQRQVIYCGGKQRH*LKAQGT
Trigger: AGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC...TCCACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp GCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAGTGAGTTAGGGCAGTTGATATaGAAGGGGAAAATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: ACFCPVRHTSCHHEKLSELGQLI*KGKMKH
Trigger: ATGCTTCATTTTCCCCTTGCATATCAACTGCCCTAA...CTCACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACCCTTTGGACTCAGAACTCTCAGTGGACTAACGTGGGTCACCTCTGTGTAGCTCTTGAACAGCTAAGATaGTTGGACACTAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: TLWTQNSQWTNVGHLCVALEQLR*LDTRQR
Trigger: CCTCTGTCTAGTGTCCAAGCATCTTAGCTGTTCAAG...AGCTACACAGAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGTCCAAAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTGAGGTAGATAATCATCCTTGCTGGAGCCTGTCCTaGCATCATACAAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RPENVHAMPLISEVDNHPCWSLS*HHTRCC
Trigger: ACAGCACCTTGTATGATGGCAGGACAGGCTCCAGCA...AGGATGATTATCTACCTCACTGATAAGAGGCATCGCATGGACGTTCTCTGGTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAGGCTAACTTTCAAATaGATGCAACGGCAGGTAATA +
Preference number: 4 (lower is better)
Translates to: SGACFCPVRHTSCHHEKLRLTFK*MQRQVI
Trigger: TATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCT...CAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGGACTGGGCCTCCCAAAGTaGTGGGATTACAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: QGRRLTFKCMQRQVIYCGLGLPK*WDYRSK
Trigger: CTTACTCCTGTAATCCCAGCACTTTGGGAGGCCCAG...TCCACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGCTCCAGTTCTTGGTGTaGAAAGGAAATTCTGACATA +
Preference number: 4 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVLQFLV*KGNSDI
Trigger: TATGTCAGAATTTCCTTTGCACACCAAGAACTGGAG...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp GAAGGAGGAACGGCTGAACTTTGGACAGCTGAGAGAAAAGCAGCATTGTTTCCAAGCTCGTATGCCCACTaGCCAGCACAGTTGACAAAA +
Preference number: 4 (lower is better)
Translates to: EGGTAELWTAERKAALFPSSYAH*PAQLTK
Trigger: TTTTGTCAACTGTGCTGGCCAGTGGGCATACGAGCT...TGGAAACAATGCTGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CTAAGGTCAGACCCTTTTGACTGGGAAAAGCAACACACAAGGCAATATGGTTTTATTCCGGCAGCTCTCTaGAACTCAGCACAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LRSDPFDWEKQHTRQYGFIPAAL*NSAQPA
Trigger: TGCGGGCTGTGCTGAGTTCCAGAGAGCTGCCGGAAT...AAAACCATATTGCCTTGTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGACCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp TGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACAGCTCTGCTCTGTGCTaGAGAGTCAAACCTGGAATT +
Preference number: 4 (lower is better)
Translates to: CHHHSCPQWSLLLSCQTYSSALC*RVKPGI
Trigger: AATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCT...GTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ATCTCTTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGAGCTCTGCTCTGTGCTaGAGAGTCAAACCTGGAATT +
Preference number: 4 (lower is better)
Translates to: ISSMSGDRDPWKSVKNTVSSALC*RVKPGI
Trigger: AATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCT...CACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAAGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GGAAAACTGGCAACCCTGGGTCTCCGTTTGAGGCCAATATACTTTGTGTTCCTAGCAACGTACACCCTTTaGACTCAGAACTCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GKLATLGLRLRPIYFVFLATYTL*TQNSQW
Trigger: CCACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGC...TAGGAACACAAAGTATATTGGCCTCAAACGGAGACCCAGGGTTGCCAGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp ATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCATATGGAAGGGTGGGTaGAGGGAAACAAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: MQNLKAAVTITHVHSGACIWKGG*RETKSL
Trigger: CAGGCTCTTTGTTTCCCTCCACCCACCCTTCCATAT...GCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GGAAAACTGGCAACCCTGGGTCTCCGTTTGAGGCCAATATACTTTGTGTTCCTACAAATGCTACGTGTTTaGAAGAGCAGAGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GKLATLGLRLRPIYFVFLQMLRV*KSRGGL
Trigger: CAGGCCTCCTCTGCTCTTCCAAACACGTAGCATTTG...TAGGAACACAAAGTATATTGGCCTCAAACGGAGACCCAGGGTTGCCAGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGTTTCCTTTACAAAGATaGCTTTGGAGGGGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEEFPLQR*LWRGAN
Trigger: ATTTGCACCCCTCCAAAGCCATCTTTGTAAAGGAAA...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp TGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCCAATATGGAGACTGTaGGCCACAGAAGATTCCCTT +
Preference number: 4 (lower is better)
Translates to: CHHHSCPQWSLLLSCQTYPIWRL*ATEDSL
Trigger: AAGGGAATCTTCTGTGGCCCACAGTCTCCATATTGG...GTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp GATGGTGCTAGGTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGTTGAGATGCAGAATTTaGAAGCAGCTGTCACCATCA +
Preference number: 4 (lower is better)
Translates to: DGARLTACLHYRPENVHALRCRI*KQLSPS
Trigger: TGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAA...CGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAACCTAGCACCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGTTGAGATGCAGAATTTaGAAGCAGCTGTCACCATCA +
Preference number: 4 (lower is better)
Translates to: HHSCPQWSLLLSCQTYLLLRCRI*KQLSPS
Trigger: TGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAA...CAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCTTGAGATGCAGAATTTaGAAGCAGCTGTCACCATCA +
Preference number: 4 (lower is better)
Translates to: PPELIGCSKKMEPKGEGLLRCRI*KQLSPS
Trigger: TGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAA...GAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGCACACAGCTTGTATTTaGATGAACCAGGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: HTATPPELIGCSKKMEPKHTACI*MNQERL
Trigger: AAGTCTCTCCTGGTTCATTCAAATACAAGCTGTGTG...CTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp TTTCAGGTTCTCAAAAAGTGGTGTAGACTCAGGCAAATGCCAGGAAATGTGTCCACGTGCTGCCCAGAATaGGCTGAGACACAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: FQVLKKWCRLRQMPGNVSTCCPE*AETQGK
Trigger: TTTGCCTTGTGTCTCAGCTCATTCTGGGCAGCACGT...GGACACATTTCCTGGCATTTGCCTGAGTCTACACCACTTTTTGAGAACCTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp TCTTCAGAGTTCCTGAATGAGAGCTTTTCTGGCTTCAGTACCAATGATCACAGAAACTCCGGGTGTGCATaGGGAGATGATCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSEFLNESFSGFSTNDHRNSGCA*GDDPRP
Trigger: TGGCCTTGGATCATCTCCTCATGCACACCCGGAGTT...TCTGTGATCATTGGTACTGAAGCCAGAAAAGCTCTCATTCAGGAACTCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGGATCTTCAGTGAAACACTaGACGCTCTCGGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: QGRRLTFKCMQRQVIYCGSSVKH*TLSESS
Trigger: GGAGCTTTCCGAGAGCGTTCAGTGTTTCACTGAAGA...TCCACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp GGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAAAGAAGACCCTTATTaGCTACACTGGCCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GKAVSSLMQRTPFGLRTLKEDPY*LHWPRS
Trigger: GCTTCTTGGCCAGTGTAGTCAATAAGGGTCTTCTTT...GAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp ATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCCCACACTCATCTCCTTaGAAAAGAGGCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: MQNLKAAVTITHVHSGACPHSSP*KRGLGS
Trigger: ACTTCCCAAGCCTCTTTTGCAAGGAGATGAGTGTGG...GCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATTCTCAATTCGGAGACTaGGAAGAGCGTAATACCCAG +
Preference number: 4 (lower is better)
Translates to: VNCLSPLQTRERPCDASYSQFGD*EERNTQ
Trigger: CTGGGTATTACGCTCTTCGCAGTCTCCGAATTGAGA...ATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR GCA 90 bp AAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTCCGGTTGATGAAATCTaGTGTCACCACTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KAVSSLMQRTPFGLRTLSPVDEI*CHHLLF
Trigger: GAAGAGCAAGTGGTGACAGCAGATTTCATCAACCGG...ACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp CAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTTGCACCACCCCGGCTTaGCCTGCCTTGAGATGCAGA +
Preference number: 4 (lower is better)
Translates to: QHTRQYGFSLSNTVAYLFCTTPA*PALRCR
Trigger: TCTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCA...AAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GAGATGAAGAAAATTATAGGGAGGCTGCCCTGGCCCAAAGGTCTGCTAATGGCTCCAGAACTAATAGGCTaGTCCAAGAAAATGGAACCC +
Preference number: 4 (lower is better)
Translates to: EMKKIIGRLPWPKGLLMAPELIG*SKKMEP
Trigger: GGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGG...AGCCATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTATAATTTTCTTCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp TCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCATTAGGGCAGTTGATATaGAAGGGGAAAATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: SCPQWSLLLSCQTYLLPPLGQLI*KGKMKH
Trigger: ATGCTTCATTTTCCCCTTGCATATCAACTGCCCTAA...TGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp TGTAGCTCTGCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGCTGAGCATTTTAAGCTaGTCTAATGAAATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: CSSALCWRVKPGIPAALWLSILS*SNEMEG
Trigger: TCCTTCCATTTCATTAGAGCAGCTTAAAATGCTCAG...CCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp CTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACTTGAACAGCTAAGATaGTTGGACACTAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: LSPSLMSTVELASVLSDILEQLR*LDTRQR
Trigger: CCTCTGTCTAGTGTCCAAGCATCTTAGCTGTTCAAG...TATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACCGGATTCCGTATTTCTaGCCAACACTCATCACTTCA +
Preference number: 4 (lower is better)
Translates to: PCLEMQNLKAAVTITHVHRIPYF*PTLITS
Trigger: TGAAGTGATGAGTGTTGGCCAGAAATACGGAATCCG...GTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp TGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACTCTAGGTCTGAATCATaGTCGTCCAGGATGAACATG +
Preference number: 4 (lower is better)
Translates to: CHHHSCPQWSLLLSCQTYSRSES*SSRMNM
Trigger: CATGTTCATCCTGGACGACCATGATTCAGACCTAGA...GTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CACAGCTTGTATTTGAATGAACCAGGAGAGACTTCAAGGATCAACTCTAAAGTGTCCTTTCGGCGCTTCTaGGTGAAGAGGGAGGCGACA +
Preference number: 4 (lower is better)
Translates to: HSLYLNEPGETSRINSKVSFRRF*VKREAT
Trigger: TGTCGCCTCCCTCTTCACCCAGAAGCGCCGAAAGGA...CACTTTAGAGTTGATCCTTGAAGTCTCTCCTGGTTCATTCAAATACAAGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACTCAGACCCTTTTGACTaGGAAAAGCAACACACAAGG +
Preference number: 4 (lower is better)
Translates to: PCLEMQNLKAAVTITHVHSDPFD*EKQHTR
Trigger: CCTTGTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGA...GTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCTCAGACCCTTTTGACTaGGAAAAGCAACACACAAGG +
Preference number: 4 (lower is better)
Translates to: GKAVSSLMQRTPFGLRTLSDPFD*EKQHTR
Trigger: CCTTGTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGA...GAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GAAGGAGGAACGGCTGAACTTTGGACAGCTGAGAGAAAAGCAGCATTGTTTCCAGGAACGGCTGAACTTTaGACAGCTGAGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: EGGTAELWTAERKAALFPGTAEL*TAERKA
Trigger: TGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCC...TGGAAACAATGCTGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCCTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCGGAACGGCTGAACTTTaGACAGCTGAGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: MQNLKAAVTITHVHSGACGTAEL*TAERKA
Trigger: TGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCC...GCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GGAAAACTGGCAACCCTGGGTCTCCGTTTGAGGCCAATATACTTTGTGTTCCTAGGAACGGCTGAACTTTaGACAGCTGAGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: GKLATLGLRLRPIYFVFLGTAEL*TAERKA
Trigger: TGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCC...TAGGAACACAAAGTATATTGGCCTCAAACGGAGACCCAGGGTTGCCAGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGAGAAACATGACTTTATaGGCCAACTGTGAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: HTATPPELIGCSKKMEPKRNMTL*ANCERD
Trigger: GTCCCTTTCACAGTTGGCCCATAAAGTCATGTTTCT...CTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AAGTTTCACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGAGAAACATGACTTTATaGGCCAACTGTGAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: KFHLGKTETLPESAGHFWRNMTL*ANCERD
Trigger: GTCCCTTTCACAGTTGGCCCATAAAGTCATGTTTCT...CCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGTGAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTGAGGTAGATAATCATCCTGAGGATATGGAAGGGTaGGTGGAGGGAAACAAAGAG +
Preference number: 4 (lower is better)
Translates to: RPENVHAMPLISEVDNHPEDMEG*VEGNKE
Trigger: CTCTTTGTTTCCCTCCACCCACCCTTCCATATCCTC...AGGATGATTATCTACCTCACTGATAAGAGGCATCGCATGGACGTTCTCTGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp TCTTCAGAGTTCCTGAATGAGAGCTTTTCTGGCTTCAGTACCAATGATCACAGACAAGGCCTTCACAGCTaGTGTTCACTGGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SSEFLNESFSGFSTNDHRQGLHS*CSLVGP
Trigger: AGGGCCAACCAGTGAACACCAGCTGTGAAGGCCTTG...TCTGTGATCATTGGTACTGAAGCCAGAAAAGCTCTCATTCAGGAACTCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp ATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAAGTTCCTAGGTTCAGATaGCATACACCGACAAGAGAA +
Preference number: 4 (lower is better)
Translates to: IRHTATPPELIGCSKKMEVPRFR*HTPTRE
Trigger: TTCTCTTGTCGGTGTATGCCATCTGAACCTAGGAAC...TTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTGAGGTAGATAATCATCCTGGGGACAGGGATCCCTaGAAGAGCGTGAAAAATACA +
Preference number: 4 (lower is better)
Translates to: RPENVHAMPLISEVDNHPGDRDP*KSVKNT
Trigger: TGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCC...AGGATGATTATCTACCTCACTGATAAGAGGCATCGCATGGACGTTCTCTGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp GAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACGGGCGTCGCGACCAATaGAATCCATGCCCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: EKQHTRQYGFSLSNTVAYGRRDQ*NPCPSL
Trigger: TAGAGAAGGGCATGGATTTCATTGGTCGCGACGCCC...GTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR TCA 90 bp GGAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTAAACAGAGACACTGCCTaGAAGCGCAGGGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: GKATHKAIWFFPFKHCGLNRDTA*KRRALL
Trigger: CAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTT...TAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp ATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACTGGACAACAGTCCATaGTATCTAAGTTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: IRHTATPPELIGCSKKMELDNSP*YLSFTL
Trigger: CAAGGTGAAACTTAGATATCATGGACTGTTGTCCAG...TTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp GTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATTATGCAAGGGGAAAATaGAGCATTGAGGCTGGACAA +
Preference number: 4 (lower is better)
Translates to: VNCLSPLQTRERPCDASYYARGK*SIEAGQ
Trigger: TTGTCCAGCCTCAATGCTTCATTTTCCCCTTGCATA...ATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATAGATCCTGGTAAGTGGTaGTACTGCTATGTAACAGTT +
Preference number: 4 (lower is better)
Translates to: LSPSLMSTVELASVLSDIDPGKW*YCYVTV
Trigger: AACTGTTACATAGCAGTATCACCACTTACCAGGATC...TATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp TCTAAAGTGCTAGAAGAGAAATCTGTGTTTGGGGCACTGAATAAACAAGTGATGGTGTGCATGAGGAGATaGTCCAAGGCCAGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SKVLEEKSVFGALNKQVMVCMRR*SKASGP
Trigger: AGGCCCACTGGCCTTGGATCATCTCCTCATGCACAC...CATCACTTGTTTATTCAGTGCCCCAAACACAGATTTCTCTTCTAGCACTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTGAGGTAGATAATCATCCTCTTGTAGCTAACCCCTaGAAGCAAGCCAACGCAAAT +
Preference number: 4 (lower is better)
Translates to: RPENVHAMPLISEVDNHPLVANP*KQANAN
Trigger: ATTTGCGTTGGCTTGCTTTCAGGGGTTAGCTACAAG...AGGATGATTATCTACCTCACTGATAAGAGGCATCGCATGGACGTTCTCTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTCCATGTGCCTGAAATaGCATATGCAAGGTGAACAT +
Preference number: 4 (lower is better)
Translates to: NCLSPLQTRERPCDASYQSMCLK*HMQGEH
Trigger: ATGTTCACCTTGCATATGTCATTTCAGGCACATGGA...CTGATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR TCA 90 bp GGAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTAAGGCGAGCCCTGTACTaGCAATGGAGGAGCCTTACA +
Preference number: 4 (lower is better)
Translates to: GKATHKAIWFFPFKHCGLRRALY*QWRSLT
Trigger: TGTAAGGCTCCTCCATTGTCAGTACAGGGCTCGCCT...TAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR GCA 90 bp AATACCCAGCATTCCGGATTCCGTATTTCTGGCCAACACTCATCACTTCATTGTTGTAGCTCTGCTCTGTaGTGGAGAGTCAAACCTGGA +
Preference number: 4 (lower is better)
Translates to: NTQHSGFRISGQHSSLHCCSSAL*WRVKPG
Trigger: TCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA...ACAATGAAGTGATGAGTGTTGGCCAGAAATACGGAATCCGGAATGCTGGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564563.1
CDS-3UTR GCA 90 bp CTAAGGTCAGACCCTTTTGACTGGGAAAAGCAACACACAAGGCAATATGGTTTTGGAAAACAGAGACACTaGCTGAAAGCGCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: LRSDPFDWEKQHTRQYGFGKQRH*LKAQGT
Trigger: AGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCC...AAAACCATATTGCCTTGTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGACCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp TCTAAAGTGCTAGAAGAGAAATCTGTGTTTGGGGCACTGAATAAACAAGTGATGGGTAATGCCTGCATCTaGCCAAGGGCCTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SKVLEEKSVFGALNKQVMGNACI*PRACSS
Trigger: GGAGGAACAGGCCCTTGGGCAGATGCAGGCATTACC...CATCACTTGTTTATTCAGTGCCCCAAACACAGATTTCTCTTCTAGCACTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCACCTGCTGGTAATGCCTaGATCTGCCCAAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPPAGNA*ICPRAC
Trigger: ACAGGCCCTTGGGCAGATGCAGGCATTACCAGCAGG...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AGAATGGCAGGAGGTTCTTATTTATTATTAAGCACTGTTGACCAAACCTCTATCCGACAGGGTAGAGCTTaGCCTTGGCCTGGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: RMAGGSYLLLSTVDQTSIRQGRA*PWPGSG
Trigger: ACCGCTTCCAGGCCAAGGCCAAGCTCTACCCTGTCG...GATAGAGGTTTGGTCAACAGTGCTTAATAATAAATAAGAACCTCCTGCCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp CAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTTCCTTTCGGCGCTTCTaGGTGAAGAGGGAGGCGACA +
Preference number: 4 (lower is better)
Translates to: QHTRQYGFSLSNTVAYLFSFRRF*VKREAT
Trigger: TGTCGCCTCCCTCTTCACCCAGAAGCGCCGAAAGGA...AAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp CAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTAGCGCAGGGCACTTCTaGGCACCCACATTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QHTRQYGFSLSNTVAYLFSAGHF*APTLSP
Trigger: AGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCT...AAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp ACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTACAGCGCAGGGCACTTCTaGGCACCCACATTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: THKAIWFFPFKHCGLLVYSAGHF*APTLSP
Trigger: AGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCT...GTAAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAGTGAGTCTGTAGTAATTAGTTaGAGATTAACAAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ACFCPVRHTSCHHEKLSESVVIS*RLTRAE
Trigger: TTCTGCCCTTGTTAATCTCCAACTAATTACTACAGA...CTCACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACGGAGGTCAGGATTTCTaGTTCTACTTCAACAAACAG +
Preference number: 4 (lower is better)
Translates to: PCLEMQNLKAAVTITHVHGGQDF*FYFNKQ
Trigger: CTGTTTGTTGAAGTAGAACCAGAAATCCTGACCTCC...GTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp ATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACAGGTTCTCAAAAAGTaGTGTAGACTCAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: IRHTATPPELIGCSKKMEQVLKK*CRLRQM
Trigger: CATTTGCCTGAGTCTACACCACTTTTTGAGAACCTG...TTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp TGTAGCTCTGCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGGCAGGAAAATTAGAATaGCAGGAGGTTCTTATTTAT +
Preference number: 4 (lower is better)
Translates to: CSSALCWRVKPGIPAALWAGKLE*QEVLIY
Trigger: ATAAATAAGAACCTCCTGCCATTCTAATTTTCCTGC...CCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGCAGAGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR TCA 90 bp TCTAAAGTGCTAGAAGAGAAATCTGTGTTTGGGGCACTGAATAAACAAGTGATGGAGGGCCAATCAGATTaGGGGCTGTGTACTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SKVLEEKSVFGALNKQVMEGQSD*GLCTSR
Trigger: CCTGGAAGTACACAGCCCTCAATCTGATTGGCCCTC...CATCACTTGTTTATTCAGTGCCCCAAACACAGATTTCTCTTCTAGCACTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp ATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCCTGGACAACAGTCCATaGTATCTAAGTTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: MQNLKAAVTITHVHSGACLDNSP*YLSFTL
Trigger: CAAGGTGAAACTTAGATATCATGGACTGTTGTCCAG...GCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp TTTCAGGTTCTCAAAAAGTGGTGTAGACTCAGGCAAATGCCAGGAAATGTGTCCGACCATCCTTCGTGGTaGGCACAAAATGCTATGACA +
Preference number: 4 (lower is better)
Translates to: FQVLKKWCRLRQMPGNVSDHPSW*AQNAMT
Trigger: TGTCATAGCATTTTGTGCTCACCACGAAGGATGGTC...GGACACATTTCCTGGCATTTGCCTGAGTCTACACCACTTTTTGAGAACCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CTAAGGTCAGACCCTTTTGACTGGGAAAAGCAACACACAAGGCAATATGGTTTTTTATATCAATGTTCGTaGGGGGTGTGTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LRSDPFDWEKQHTRQYGFLYQCS*GVCGGW
Trigger: CCATCCCCCACACACCCCTCACGAACATTGATATAA...AAAACCATATTGCCTTGTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGACCTTAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR GCA 90 bp TCTAAAGTGCTAGAAGAGAAATCTGTGTTTGGGGCACTGAATAAACAAGTGATGCACCCCGGCTTGCCCTaGCTTGAGATGCAGAATTTG +
Preference number: 4 (lower is better)
Translates to: SKVLEEKSVFGALNKQVMHPGLP*LEMQNL
Trigger: CAAATTCTGCATCTCAAGGCAGGGCAAGCCGGGGTG...CATCACTTGTTTATTCAGTGCCCCAAACACAGATTTCTCTTCTAGCACTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AGAATGGCAGGAGGTTCTTATTTATTATTAAGCACTGTTGACCAAACCTCTATCGGTAATGCCTGCATCTaGCCAAGGGCCTGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RMAGGSYLLLSTVDQTSIGNACI*PRACSS
Trigger: GGAGGAACAGGCCCTTGGGCAGATGCAGGCATTACC...GATAGAGGTTTGGTCAACAGTGCTTAATAATAAATAAGAACCTCCTGCCATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR GCA 90 bp TGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACAGGCTAACTTTCAAATaGATGCAACGGCAGGTAATA +
Preference number: 4 (lower is better)
Translates to: CHHHSCPQWSLLLSCQTYRLTFK*MQRQVI
Trigger: TATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCT...GTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GAAGGAGGAACGGCTGAACTTTGGACAGCTGAGAGAAAAGCAGCATTGTTTCCAATGCCTGATCCCCAGTaGATGTTATCTCAAACTTTG +
Preference number: 4 (lower is better)
Translates to: EGGTAELWTAERKAALFPMPDPQ*MLSQTL
Trigger: CAAAGTTTGAGATAACATCCACTGGGGATCAGGCAT...TGGAAACAATGCTGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCCTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCAGTGAGGCTGCCCTGGTaGCATCACTTCCCATGTAAG +
Preference number: 4 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPVRLPW*HHFPCK
Trigger: CTTACATGGGAAGTGATGCCACCAGGGCAGCCTCAC...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CTAAGGTCAGACCCTTTTGACTGGGAAAAGCAACACACAAGGCAATATGGTTTTACTCAGAACTCTCAGTaGACTAACGTGGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: LRSDPFDWEKQHTRQYGFTQNSQ*TNVGHL
Trigger: GAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGT...AAAACCATATTGCCTTGTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGACCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp TGGCAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGTTCCTAGGTTCAGATaGCATACACCGACAAGAGAA +
Preference number: 4 (lower is better)
Translates to: WQGRRLTFKCMQRQVIYCVPRFR*HTPTRE
Trigger: TTCTCTTGTCGGTGTATGCCATCTGAACCTAGGAAC...ACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GAGATGAAGAAAATTATAGGGAGGCTGCCCTGGCCCAAAGGTCTGCTAATGGCTGCAGGTAATATACTGTaGAAGCTGGAGGTTTACTTT +
Preference number: 4 (lower is better)
Translates to: EMKKIIGRLPWPKGLLMAAGNIL*KLEVYF
Trigger: AAAGTAAACCTCCAGCTTCCACAGTATATTACCTGC...AGCCATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTATAATTTTCTTCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp GAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACCCCTGGGTCTCCGTTTaGGGCCAATATACTTTGTGT +
Preference number: 4 (lower is better)
Translates to: EKQHTRQYGFSLSNTVAYPWVSV*GQYTLC
Trigger: ACACAAAGTATATTGGCCTCAAACGGAGACCCAGGG...GTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp GGAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTATGTCTCTGGCCTGAATaGGATCTCTTCAATGTCGGG +
Preference number: 4 (lower is better)
Translates to: GKATHKAIWFFPFKHCGLCLWPE*DLFNVG
Trigger: CCCGACATTGAAGAGATCTCATTCAGGCCAGAGACA...TAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTCACTGCTGGTGGTCTTaGCAACATACTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: KATHKAIWFFPFKHCGLLHCWWS*QHTAHS
Trigger: GGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTG...AAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATTTAGGGCAGTTGATATaGAAGGGGAAAATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: VNCLSPLQTRERPCDASYLGQLI*KGKMKH
Trigger: ATGCTTCATTTTCCCCTTGCATATCAACTGCCCTAA...ATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp GAGATGAAGAAAATTATAGGGAGGCTGCCCTGGCCCAAAGGTCTGCTAATGGCTCTGAGCATTTTAAGCTaGTCTAATGAAATGGAAGGA +
Preference number: 4 (lower is better)
Translates to: EMKKIIGRLPWPKGLLMALSILS*SNEMEG
Trigger: TCCTTCCATTTCATTAGAGCAGCTTAAAATGCTCAG...AGCCATTAGCAGACCTTTGGGCCAGGGCAGCCTCCCTATAATTTTCTTCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AACAGAATTCTAATCATATGCTCCTCTAACAAGCCAACCAGAACCTTCCAAAAAGTCCCTCCTTATTCCTaGTGGATTTGCAGCCACGGC +
Preference number: 4 (lower is better)
Translates to: NRILIICSSNKPTRTFQKVPPYS*WICSHG
Trigger: GCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGAC...TTTTTGGAAGGTTCTGGTTGGCTTGTTAGAGGAGCATATGATTAGAATTCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp TCTAAAGTGCTAGAAGAGAAATCTGTGTTTGGGGCACTGAATAAACAAGTGATGTTCTTGCATCGCTACTaGCACCAAGACGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SKVLEEKSVFGALNKQVMFLHRY*HQDGGK
Trigger: CTTGCCACCGTCTTGGTGGCAGTAGCGATGCAAGAA...CATCACTTGTTTATTCAGTGCCCCAAACACAGATTTCTCTTCTAGCACTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCATGTAGGCACTGCTGGTaGTCTTGCCAACATACTGCC +
Preference number: 4 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPCRHCW*SCQHTA
Trigger: GGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACA...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTATCTGGGGCATCTACTaGCCTCCCCTGTTCACTCAA +
Preference number: 4 (lower is better)
Translates to: QHTRQYGFSLSNTVAYLFIWGIY*PPLFTQ
Trigger: TTGAGTGAACAGGGGAGGCCAGTAGATGCCCCAGAT...AAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCAATCTGGGGCATCTACTaGCCTCCCCTGTTCACTCAA +
Preference number: 4 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPIWGIY*PPLFTQ
Trigger: TTGAGTGAACAGGGGAGGCCAGTAGATGCCCCAGAT...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp TCTTCAGAGTTCCTGAATGAGAGCTTTTCTGGCTTCAGTACCAATGATCACAGACTTCTAGTGCCAATATaGAGACTGTGGGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: SSEFLNESFSGFSTNDHRLLVPI*RLWATE
Trigger: TTCTGTGGCCCACAGTCTCCATATTGGCACTAGAAG...TCTGTGATCATTGGTACTGAAGCCAGAAAAGCTCTCATTCAGGAACTCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp GGAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTCAGAGGGGGAAACTaGTGTCATTTAACAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GKATHKAIWFFPFKHCGLLRGGN*CHLTGG
Trigger: ACCTCCTGTTAAATGACATCAGTTTCCCCCTCTGAG...TAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCACGGTCTCTAGCCTTATaGAACGTACACCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPRSLAL*NVHPLD
Trigger: GTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCG...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AACAGGAGGTCAGGATTTCTGGTTCTACTTCAACAAACAGTGCATAATTTTGGAACCCACATTGTCTCCTaGTCCAGAGGATATGGAAGG +
Preference number: 4 (lower is better)
Translates to: NRRSGFLVLLQQTVHNFGTHIVS*SRGYGR
Trigger: CCTTCCATATCCTCTGGAGCAGGAGACAATGTGGGT...TCCAAAATTATGCACTGTTTGTTGAAGTAGAACCAGAAATCCTGACCTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTACCCACATTGTCTCCTaGTCCAGAGGATATGGAAGG +
Preference number: 4 (lower is better)
Translates to: KATHKAIWFFPFKHCGLLTHIVS*SRGYGR
Trigger: CCTTCCATATCCTCTGGAGCAGGAGACAATGTGGGT...AAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp AGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTGAGGTAGATAATCATCCTTTAGGGCAGTTGATATaGAAGGGGAAAATGAAGCAT +
Preference number: 4 (lower is better)
Translates to: RPENVHAMPLISEVDNHPLGQLI*KGKMKH
Trigger: ATGCTTCATTTTCCCCTTGCATATCAACTGCCCTAA...AGGATGATTATCTACCTCACTGATAAGAGGCATCGCATGGACGTTCTCTGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR GCA 90 bp ACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTACGTCAGGAAGTTATGCTaGCCTCTCCTCTTGAACAGC +
Preference number: 4 (lower is better)
Translates to: THKAIWFFPFKHCGLLVYVRKLC*PLLLNS
Trigger: GCTGTTCAAGAGGAGAGGGCAGCATAACTTCCTGAC...GTAAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AGAATGGCAGGAGGTTCTTATTTATTATTAAGCACTGTTGACCAAACCTCTATCCACTCAAGAGGCCACTaGCTCTCAGGAGTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: RMAGGSYLLLSTVDQTSIHSRGH*LSGVQN
Trigger: ATTCTGGACTCCTGAGAGGCAGTGGCCTCTTGAGTG...GATAGAGGTTTGGTCAACAGTGCTTAATAATAAATAAGAACCTCCTGCCATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CCA 90 bp TCTAAAGTGCTAGAAGAGAAATCTGTGTTTGGGGCACTGAATAAACAAGTGATGAGCTCGTATGCCCACTaGCCAGCACAGTTGACAAAA +
Preference number: 4 (lower is better)
Translates to: SKVLEEKSVFGALNKQVMSSYAH*PAQLTK
Trigger: TTTTGTCAACTGTGCTGGCCAGTGGGCATACGAGCT...CATCACTTGTTTATTCAGTGCCCCAAACACAGATTTCTCTTCTAGCACTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp TCTTCAGAGTTCCTGAATGAGAGCTTTTCTGGCTTCAGTACCAATGATCACAGATCAGACCCTTTTGACTaGGAAAAGCAACACACAAGG +
Preference number: 4 (lower is better)
Translates to: SSEFLNESFSGFSTNDHRSDPFD*EKQHTR
Trigger: CCTTGTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGA...TCTGTGATCATTGGTACTGAAGCCAGAAAAGCTCTCATTCAGGAACTCTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCAACTCAGAACTCTCAGTaGACTAACGTGGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPTQNSQ*TNVGHL
Trigger: GAGGTGACCCACGTTAGTCCACTGAGAGTTCTGAGT...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATCAGTCTGTAGTAATTAGTTaGAGATTAACAAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: NCLSPLQTRERPCDASYQSVVIS*RLTRAE
Trigger: TTCTGCCCTTGTTAATCTCCAACTAATTACTACAGA...CTGATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AACAGGAGGTCAGGATTTCTGGTTCTACTTCAACAAACAGTGCATAATTTTGGACCGGGGTTTAATCACTaGGCTATGTGGTCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: NRRSGFLVLLQQTVHNFGPGFNH*AMWSLC
Trigger: ACACAGAGACCACATAGCCCAGTGATTAAACCCCGG...TCCAAAATTATGCACTGTTTGTTGAAGTAGAACCAGAAATCCTGACCTCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GGAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTCTAGTGCCAATATaGAGACTGTGGGCCACAGAA +
Preference number: 4 (lower is better)
Translates to: GKATHKAIWFFPFKHCGLLLVPI*RLWATE
Trigger: TTCTGTGGCCCACAGTCTCCATATTGGCACTAGAAG...TAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GGAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTAGGAAACCTTGCTTGGTaGAGACAGTGCACAGTGTTA +
Preference number: 4 (lower is better)
Translates to: GKATHKAIWFFPFKHCGLGNLAW*RQCTVL
Trigger: TAACACTGTGCACTGTCTCCACCAAGCAAGGTTTCC...TAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR TCA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCAGGGAAAATGAAGCATTaGGGCTGGACAACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPGKMKH*GWTTVH
Trigger: ATGGACTGTTGTCCAGCCTCAATGCTTCATTTTCCC...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTGGGAAAATGAAGCATTaGGGCTGGACAACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: QHTRQYGFSLSNTVAYLFGKMKH*GWTTVH
Trigger: ATGGACTGTTGTCCAGCCTCAATGCTTCATTTTCCC...AAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp GAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTCAGTCTTAGGAGTATaGCCCTATTCATGGACAAGG +
Preference number: 4 (lower is better)
Translates to: EKQHTRQYGFSLSNTVAYSVLGV*PYSWTR
Trigger: CCTTGTCCATGAATAGGGTCATACTCCTAAGACTGA...GTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AACAGAATTCTAATCATATGCTCCTCTAACAAGCCAACCAGAACCTTCCAAAAAGAATGCTCTGATATCTaGCACCGGTGGTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: NRILIICSSNKPTRTFQKECSDI*HRWSGS
Trigger: ACTTCCTGACCACCGGTGTCAGATATCAGAGCATTC...TTTTTGGAAGGTTCTGGTTGGCTTGTTAGAGGAGCATATGATTAGAATTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp CAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTGACCATCCTTCGTGGTaGGCACAAAATGCTATGACA +
Preference number: 4 (lower is better)
Translates to: QHTRQYGFSLSNTVAYLFDHPSW*AQNAMT
Trigger: TGTCATAGCATTTTGTGCTCACCACGAAGGATGGTC...AAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp AACAGAATTCTAATCATATGCTCCTCTAACAAGCCAACCAGAACCTTCCAAAAACCCTGGGTCTCCGTTTaGGGCCAATATACTTTGTGT +
Preference number: 4 (lower is better)
Translates to: NRILIICSSNKPTRTFQKPWVSV*GQYTLC
Trigger: ACACAAAGTATATTGGCCTCAAACGGAGACCCAGGG...TTTTTGGAAGGTTCTGGTTGGCTTGTTAGAGGAGCATATGATTAGAATTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR TCA 90 bp TCTAAAGTGCTAGAAGAGAAATCTGTGTTTGGGGCACTGAATAAACAAGTGATGGCTCTTCAGAGTTCCTaGATGAGAGCTTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SKVLEEKSVFGALNKQVMALQSS*MRAFLA
Trigger: AGCCAGAAAAGCTCTCATTCAGGAACTCTGAAGAGC...CATCACTTGTTTATTCAGTGCCCCAAACACAGATTTCTCTTCTAGCACTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp TCTAAAGTGCTAGAAGAGAAATCTGTGTTTGGGGCACTGAATAAACAAGTGATGCCACACTCATCTCCTTaGAAAAGAGGCTTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SKVLEEKSVFGALNKQVMPHSSP*KRGLGS
Trigger: ACTTCCCAAGCCTCTTTTGCAAGGAGATGAGTGTGG...CATCACTTGTTTATTCAGTGCCCCAAACACAGATTTCTCTTCTAGCACTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTATGGCTTTGGAGGGGTaGAAATGCTACGTGTTTGGA +
Preference number: 4 (lower is better)
Translates to: KATHKAIWFFPFKHCGLLMALEG*KCYVFG
Trigger: TCCAAACACGTAGCATTTGCACCCCTCCAAAGCCAT...AAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp CTAAGGTCAGACCCTTTTGACTGGGAAAAGCAACACACAAGGCAATATGGTTTTATGCCTGATCCCCAGTaGATGTTATCTCAAACTTTG +
Preference number: 4 (lower is better)
Translates to: LRSDPFDWEKQHTRQYGFMPDPQ*MLSQTL
Trigger: CAAAGTTTGAGATAACATCCACTGGGGATCAGGCAT...AAAACCATATTGCCTTGTGTGTTGCTTTTCCCAGTCAAAAGGGTCTGACCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp GAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTCTAGGTCTGAATCATaGTCGTCCAGGATGAACATG +
Preference number: 4 (lower is better)
Translates to: EKQHTRQYGFSLSNTVAYSRSES*SSRMNM
Trigger: CATGTTCATCCTGGACGACCATGATTCAGACCTAGA...GTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
3UTR CAA 72 bp AATCACAGAAAACCACCAGACTCACACAGCTTGTATTaGAATGAACCAGGAGAGACTTCAAGGATCAACTCT +
Preference number: 4 (lower is better)
Translates to: NHRKPPDSHSLY*NEPGETSRINS
Trigger: AGAGTTGATCCTTGAAGTCTCTCCTGGTTCATTCAAATACAAGCTGTGTGAGTCTGGTGGTTTTCTGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
3UTR CAA 72 bp AGGGAAGGCAAAGGCATACAAAAATACTCAGTTGTCTaGAAAAGTGTACTGGTAGTGATCAGGGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: REGKGIQKYSVV*KSVLVVIRATK
Trigger: CTTTGTAGCCCTGATCACTACCAGTACACTTTTCAAGACAACTGAGTATTTTTGTATGCCTTTGCCTTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR TCA 90 bp GGAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTATTGAGATGCAGAATTTaGAAGCAGCTGTCACCATCA +
Preference number: 4 (lower is better)
Translates to: GKATHKAIWFFPFKHCGLLRCRI*KQLSPS
Trigger: TGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAA...TAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp CAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTTATGCAAGGGGAAAATaGAGCATTGAGGCTGGACAA +
Preference number: 4 (lower is better)
Translates to: QHTRQYGFSLSNTVAYLFYARGK*SIEAGQ
Trigger: TTGTCCAGCCTCAATGCTTCATTTTCCCCTTGCATA...AAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR TCA 90 bp AGAATGGCAGGAGGTTCTTATTTATTATTAAGCACTGTTGACCAAACCTCTATCCTTGTAGCTAACCCCTaGAAGCAAGCCAACGCAAAT +
Preference number: 4 (lower is better)
Translates to: RMAGGSYLLLSTVDQTSILVANP*KQANAN
Trigger: ATTTGCGTTGGCTTGCTTTCAGGGGTTAGCTACAAG...GATAGAGGTTTGGTCAACAGTGCTTAATAATAAATAAGAACCTCCTGCCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR GCA 90 bp ACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTACACTTCATTGTATACATaGAGGGCGTACTCTATGGGG +
Preference number: 4 (lower is better)
Translates to: THKAIWFFPFKHCGLLVYTSLYT*RAYSMG
Trigger: CCCCATAGAGTACGCCCTGCATGTATACAATGAAGT...GTAAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR GCA 90 bp AAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTTCCTCAGAAAAATTGTaGACAAAGCCCAGGCAAACG +
Preference number: 4 (lower is better)
Translates to: KATHKAIWFFPFKHCGLLSSEKL*TKPRQT
Trigger: CGTTTGCCTGGGCTTTGTGCACAATTTTTCTGAGGA...AAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CCA 90 bp AAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTCGGATTCCGTATTTCTaGCCAACACTCATCACTTCA +
Preference number: 4 (lower is better)
Translates to: KATHKAIWFFPFKHCGLLRIPYF*PTLITS
Trigger: TGAAGTGATGAGTGTTGGCCAGAAATACGGAATCCG...AAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR CCA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCAAGAAACATGACTTTATaGGCCAACTGTGAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPRNMTL*ANCERD
Trigger: GTCCCTTTCACAGTTGGCCCATAAAGTCATGTTTCT...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp GGAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTAGCAGGTAATATACTGTaGAAGCTGGAGGTTTACTTT +
Preference number: 4 (lower is better)
Translates to: GKATHKAIWFFPFKHCGLAGNIL*KLEVYF
Trigger: AAAGTAAACCTCCAGCTTCCACAGTATATTACCTGC...TAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp ACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTGTTTACGTGTTTGTCCCTTTTTaGTCTTCAGAGTTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: THKAIWFFPFKHCGLLVYVFVPF*SSEFLN
Trigger: ATTCAGGAACTCTGAAGAGCAAAAAGGGACAAACAC...GTAAACAAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR GCA 90 bp AACAGGAGGTCAGGATTTCTGGTTCTACTTCAACAAACAGTGCATAATTTTGGAGTGTTTGTCCCTTTTTaGTCTTCAGAGTTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: NRRSGFLVLLQQTVHNFGVFVPF*SSEFLN
Trigger: ATTCAGGAACTCTGAAGAGCAAAAAGGGACAAACAC...TCCAAAATTATGCACTGTTTGTTGAAGTAGAACCAGAAATCCTGACCTCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CCA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCATTTCCTTTACAAAGATaGCTTTGGAGGGGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPFPLQR*LWRGAN
Trigger: ATTTGCACCCCTCCAAAGCCATCTTTGTAAAGGAAA...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCCTGCACCACCCCGGCTaGCCCTGCCTTGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: AAPQGCIRHTATPPELIGLHHPG*PCLEMQ
Trigger: CTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCAG...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACTGTCCACAGTGGAGCTaGCTTCTGTCCTGTCAGACA +
Preference number: 5 (lower is better)
Translates to: GCRHELPLRAASDTRQPHCPQWS*LLSCQT
Trigger: TGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACA...GTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCCGAGGGCCAATCAGATaGAGGGCTGTGTACTTCCAG +
Preference number: 5 (lower is better)
Translates to: AAPQGCIRHTATPPELIGRGPIR*RAVYFQ
Trigger: CTGGAAGTACACAGCCCTCAATCTGATTGGCCCTCG...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp ACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATATCTGCTGTCACCACTaGCTCTTCCCCCGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: TSCPSGLHPTHGNPTRTNICCHH*LFPRVL
Trigger: GAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGAT...ATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GGCTGCAGGCACGAGCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACGTCAGATTAGGGCAGTaGATATGCAAGGGGAAAATG +
Preference number: 5 (lower is better)
Translates to: GCRHELPLRAASDTRQPHVRLGQ*ICKGKM
Trigger: CATTTTCCCCTTGCATATCAACTGCCCTAATCTGAC...GTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGCTCGTGCCTGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGAAGCTCCCATCATTCTaGCATCGCTACTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: AHSTAEQENELPGCRHELKLPSF*HRYCHQ
Trigger: TTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTT...CAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp TCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACTGCACCACCCCGGCTaGCCCTGCCTTGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: SCPQWSLLLSCQTYLLPPLHHPG*PCLEMQ
Trigger: CTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCAG...TGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCAGCACAGCCCGCAAGGTaGAAAGGCCCAGGACAACAC +
Preference number: 5 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPAQPAR*KGPGQH
Trigger: GTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGC...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp AGCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTTGCAACGTACACCCTTaGGACTCAGAACTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SPQHSRTGERAAGLQARACNVHP*DSELSV
Trigger: CACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCA...AGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAGTGAGGCTGGTGTTCACTGGTaGGCCCTCCAGCCGGCAACA +
Preference number: 5 (lower is better)
Translates to: ACFCPVRHTSCHHEKLSEAGVHW*ALQPAT
Trigger: TGTTGCCGGCTGGAGGGCCAACCAGTGAACACCAGC...CTCACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGCTGGTGTTCACTGGTaGGCCCTCCAGCCGGCAACA +
Preference number: 5 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEEAGVHW*ALQPAT
Trigger: TGTTGCCGGCTGGAGGGCCAACCAGTGAACACCAGC...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACGAGGGCCAATCAGATaGAGGGCCGGTGGAGATCTG +
Preference number: 5 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPRGPIR*RAGGDL
Trigger: CAGATCTCCACCGGCCCTCAATCTGATTGGCCCTCG...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564563.1
CDS-3UTR CAA 90 bp GGCACTTCTGGGCACCCACATTGTCTCCTGCTCCAGAGGATATGGAAGGGTGGGCGAGGGCCAATCAGATaGAGGGCTGTGTACTTCCAG +
Preference number: 5 (lower is better)
Translates to: GTSGHPHCLLLQRIWKGGRGPIR*RAVYFQ
Trigger: CTGGAAGTACACAGCCCTCAATCTGATTGGCCCTCG...CCCACCCTTCCATATCCTCTGGAGCAGGAGACAATGTGGGTGCCCAGAAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGCAACGTACACCCTTaGGACTCAGAACTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: AAPQGCIRHTATPPELIGCNVHP*DSELSV
Trigger: CACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCA...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GCTCTGTGCTGGAGAGTCAAACCTGGAATTCCGGCAGCTCTCTGGAACTCAGCAATCTGCTGTCACCACTaGCTCTTCCCCCGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: ALCWRVKPGIPAALWNSAICCHH*LFPRVL
Trigger: GAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGAT...TGCTGAGTTCCAGAGAGCTGCCGGAATTCCAGGTTTGACTCTCCAGCACAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGATCTGCTGTCACCACTaGCTCTTCCCCCGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVICCHH*LFPRVL
Trigger: GAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGAT...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CAA 90 bp CTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGATCCCTTCCTGTCCACAGTGGAGCTaGCTTCTGTCCTGTCAGACA +
Preference number: 5 (lower is better)
Translates to: LSTARKVERPRTTHLIPSCPQWS*LLSCQT
Trigger: TGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACA...GGAAGGGATCAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GGGGGAAAGGAGGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACGCACAGCCCGCAAGGTaGAAAGGCCCAGGACAACAC +
Preference number: 5 (lower is better)
Translates to: GGKEEKRSLALCNVHPLDAQPAR*KGPGQH
Trigger: GTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGC...GTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCCTCCTTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GCCCACAGCACAGCAGAACAGGAGAACGAGCTGCCGGGCTGCAGGCACGAGCTGTATCTAAGTTTCACCTaGGGAAAACAGAGACACTGC +
Preference number: 5 (lower is better)
Translates to: AHSTAEQENELPGCRHELYLSFT*GKQRHC
Trigger: GCAGTGTCTCTGTTTTCCCAAGGTGAAACTTAGATA...CAGCTCGTGCCTGCAGCCCGGCAGCTCGTTCTCCTGTTCTGCTGTGCTGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GAGCTTTCTACCCCACGCCCATTGTTCCGAAGAAGGAGAGGCTATGTGGGGCGGGCAAATGCTACGTGTTaGGAAGAGCAGAGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: ELSTPRPLFRRRRGYVGRANATC*EEQRRP
Trigger: AGGCCTCCTCTGCTCTTCCAAACACGTAGCATTTGC...CCGCCCCACATAGCCTCTCCTTCTTCGGAACAATGGGCGTGGGGTAGAAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CAA 90 bp ATGAGGAGGCTGTGGTTGTCCCTCCTTATTCCTGCTGGATTTGCAGCCACGGCTTCTACCCCACGCCCATaGTTCCGAAGAAGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: MRRLWLSLLIPAGFAATASTPRP*FRRRRG
Trigger: GCCTCTCCTTCTTCGGAACAATGGGCGTGGGGTAGA...AGCCGTGGCTGCAAATCCAGCAGGAATAAGGAGGGACAACCACAGCCTCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CAA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGCGAGGGCCAATCAGATaGAGGGCTGTGTACTTCCAG +
Preference number: 5 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVRGPIR*RAVYFQ
Trigger: CTGGAAGTACACAGCCCTCAATCTGATTGGCCCTCG...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCGCACTGCTGGTGGTCTaGCCAACATACTGCCCATTC +
Preference number: 5 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGALLVV*PTYCPF
Trigger: GAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGC...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CAA 90 bp CAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGCACTGCTGGTGGTCTaGCCAACATACTGCCCATTC +
Preference number: 5 (lower is better)
Translates to: QWSLLLSCQTYLLPPREAALLVV*PTYCPF
Trigger: GAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGC...AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CAA 90 bp ATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCCTGCACCACCCCGGCTaGCCCTGCCTTGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: MQNLKAAVTITHVHSGACLHHPG*PCLEMQ
Trigger: CTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCAG...GCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GCTGCCCCTCAGGGCTGCATCCGACACACGGCAACCCCACCAGAACTAATAGGCGTCAGATTAGGGCAGTaGATATGCAAGGGGAAAATG +
Preference number: 5 (lower is better)
Translates to: AAPQGCIRHTATPPELIGVRLGQ*ICKGKM
Trigger: CATTTTCCCCTTGCATATCAACTGCCCTAATCTGAC...GCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGATGCAGCCCTGAGGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCCGAGGGCCAATCAGATaGAGGGCCGGTGGAGATCTG +
Preference number: 5 (lower is better)
Translates to: VTITHVHSGACFCPVRHTRGPIR*RAGGDL
Trigger: CAGATCTCCACCGGCCCTCAATCTGATTGGCCCTCG...GGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000567046.5
CDS-3UTR CAA 90 bp CCCGGCTTGCCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTGCACTGCTGGTGGTCTaGCCAACATACTGCCCATTC +
Preference number: 5 (lower is better)
Translates to: PGLPCLEMQNLKAAVTITALLVV*PTYCPF
Trigger: GAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGC...AGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GGGGGAAAGGAGGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACGCACTGCTGGTGGTCTaGCCAACATACTGCCCATTC +
Preference number: 5 (lower is better)
Translates to: GGKEEKRSLALCNVHPLDALLVV*PTYCPF
Trigger: GAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGC...GTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCCTCCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp CCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCATCTGCTGTCACCACTaGCTCTTCCCCCGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: PPELIGCSKKMEPKGEGLICCHH*LFPRVL
Trigger: GAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGAT...GAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp CTCCAGGCTGTAGCTGTAGGCACTGCTGGTGGTCTTGCCAACATACTGCCCATTTGTCCACAGTGGAGCTaGCTTCTGTCCTGTCAGACA +
Preference number: 5 (lower is better)
Translates to: LQAVAVGTAGGLANILPICPQWS*LLSCQT
Trigger: TGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACA...AATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCTACAGCCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CAA 90 bp GCCAACACTCATCACTTCATTGTATACATGCAGGGCGTACTCTATGGGGATGTACTGCACCACCCCGGCTaGCCCTGCCTTGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: ANTHHFIVYMQGVLYGDVLHHPG*PCLEMQ
Trigger: CTGCATCTCAAGGCAGGGCAAGCCGGGGTGGTGCAG...TACATCCCCATAGAGTACGCCCTGCATGTATACAATGAAGTGATGAGTGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564563.1
CDS-3UTR CAA 90 bp TGGCTTTGGAGGGGTGCAAATGCTACGTGTTTGGAAGAGCAGAGGAGGCCTGCAGCAAATGCTACGTGTTaGGAAGAGCAGAGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: WLWRGANATCLEEQRRPAANATC*EEQRRP
Trigger: AGGCCTCCTCTGCTCTTCCAAACACGTAGCATTTGC...TGCAGGCCTCCTCTGCTCTTCCAAACACGTAGCATTTGCACCCCTCCAAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp CTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGATCCCTTCCGAACAGCTAAGATGCTaGGACACTAGACAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: LSTARKVERPRTTHLIPSEQLRC*DTRQRQ
Trigger: TTGCCTCTGTCTAGTGTCCAAGCATCTTAGCTGTTC...GGAAGGGATCAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGATGAGGAGGCTGTGGTaGTCCCTCCTTATTCCTGCT +
Preference number: 5 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVMRRLW*SLLIPA
Trigger: AGCAGGAATAAGGAGGGACAACCACAGCCTCCTCAT...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp CTGCTCCAAGAAAATGGAACCCAAGGGAGAGGGACTCGTGCCCTGAGACCTGCAACCCTGGGTCTCCGTTaGAGGCCAATATACTTTGTG +
Preference number: 5 (lower is better)
Translates to: LLQENGTQGRGTRALRPATLGLR*RPIYFV
Trigger: CACAAAGTATATTGGCCTCAAACGGAGACCCAGGGT...TGCAGGTCTCAGGGCACGAGTCCCTCTCCCTTGGGTTCCATTTTCTTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp AGGAAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGATGGCTCACCACTTATaGCGTGTACACAAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RKRSSKVTPTLGQDDGEEMAHHL*RVHKAW
Trigger: CCAGGCCTTGTGTACACGCAATAAGTGGTGAGCCAT...CTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CAA 90 bp CAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTCTCCTGACACTCATCACTTCATaGTATACATGCAGGGCGTAC +
Preference number: 5 (lower is better)
Translates to: QRHCLKAQGTSGHPHCLLTLITS*YTCRAY
Trigger: GTACGCCCTGCATGTATACAATGAAGTGATGAGTGT...CAGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR CAA 90 bp TTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGTCACGCACTGCTGGTGGTCTaGCCAACATACTGCCCATTC +
Preference number: 5 (lower is better)
Translates to: FNVGGQGSLEEREKYSGHALLVV*PTYCPF
Trigger: GAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGC...GTGACCACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp TGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACATCTGCTGTCACCACTaGCTCTTCCCCCGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: CHHHSCPQWSLLLSCQTYICCHH*LFPRVL
Trigger: GAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGAT...GTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CAA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGTCATACTCTCCCCGGTaGATGAAATCTGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVSYSPR*MKSAVT
Trigger: GGTGACAGCAGATTTCATCAACCGGGGAGAGTATGA...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GTGGGAAGGGAAGAAGAGCCCAGAGTGAATATTAGGAGGAGGAGGTGGAAGGGCTCATACTCTCCCCGGTaGATGAAATCTGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: VGREEEPRVNIRRRRWKGSYSPR*MKSAVT
Trigger: GGTGACAGCAGATTTCATCAACCGGGGAGAGTATGA...GCCCTTCCACCTCCTCCTCCTAATATTCACTCTGGGCTCTTCTTCCCTTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GGGGGAAAGGAGGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTGTCCACAGTGGAGCTaGCTTCTGTCCTGTCAGACA +
Preference number: 5 (lower is better)
Translates to: GGKEEKRSLALCNVHPLDCPQWS*LLSCQT
Trigger: TGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACA...GTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCCTCCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp AAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAGTGCACAGCCCGCAAGGTaGAAAGGCCCAGGACAACAC +
Preference number: 5 (lower is better)
Translates to: KAVSSLMQRTPFGLRTLSAQPAR*KGPGQH
Trigger: GTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGC...ACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp CTCAGCACAGCCCGCAAGGTTGAAAGGCCCAGGACAACACACCTGATCCCTTCCTTTACAAAGATGGCTTaGGAGGGGTGCAAATGCTAC +
Preference number: 5 (lower is better)
Translates to: LSTARKVERPRTTHLIPSFTKMA*EGCKCY
Trigger: GTAGCATTTGCACCCCTCCAAAGCCATCTTTGTAAA...GGAAGGGATCAGGTGTGTTGTCCTGGGCCTTTCAACCTTGCGGGCTGTGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp CTGCTGGATTTGCAGCCACGGCTCTGGATCTGGGGCATCTACTGGCCTCCCCTGAAGCTGAACTGCAAATaGACAAACACAAACGATGAG +
Preference number: 5 (lower is better)
Translates to: LLDLQPRLWIWGIYWPPLKLNCK*TNTNDE
Trigger: CTCATCGTTTGTGTTTGTCAATTTGCAGTTCAGCTT...CAGGGGAGGCCAGTAGATGCCCCAGATCCAGAGCCGTGGCTGCAAATCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CAA 90 bp AGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGAGCTGTGGTTGCCACTaGCAAAAGAGGCTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: SSCHHHSCPQWSLLLSCQSCGCH*QKRLGK
Trigger: CTTCCCAAGCCTCTTTTGCAAGTGGCAACCACAGCT...CTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564563.1
CDS-3UTR CAA 90 bp TTCAATGTCGGGGGACAGGGATCCCTGGAAGAGCGTGAAAAATACAGTGGTCACCCCACACTCATCTCCTaGCAAAAGAGGCTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: FNVGGQGSLEEREKYSGHPTLIS*QKRLGK
Trigger: CTTCCCAAGCCTCTTTTGCAAGGAGATGAGTGTGGG...GTGACCACTGTATTTTTCACGCTCTTCCAGGGATCCCTGTCCCCCGACATTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp AACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATCAGGCACTGCTGGTGGTCTaGCCAACATACTGCCCATTC +
Preference number: 5 (lower is better)
Translates to: NCLSPLQTRERPCDASYQALLVV*PTYCPF
Trigger: GAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGC...CTGATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GAAGGAGGAACGGCTGAACTTTGGACAGCTGAGAGAAAAGCAGCATTGTTTCCAATCTGCTGTCACCACTaGCTCTTCCCCCGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: EGGTAELWTAERKAALFPICCHH*LFPRVL
Trigger: GAGGACACGGGGGAAGAGCAAGTGGTGACAGCAGAT...TGGAAACAATGCTGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCCTCCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp AGCTGTAGGCACTGCTGGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGTCATACTCTCCCCGGTaGATGAAATCTGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: SCRHCWWSCQHTAHSGKWSYSPR*MKSAVT
Trigger: GGTGACAGCAGATTTCATCAACCGGGGAGAGTATGA...CCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CAA 90 bp TACACTCCATTCTGCTTCTGCTGCAGGAGGGCGTCGCGACCAATGAAATCCATGTGCAACGTACACCCTTaGGACTCAGAACTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: YTPFCFCCRRASRPMKSMCNVHP*DSELSV
Trigger: CACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCA...CATGGATTTCATTGGTCGCGACGCCCTCCTGCAGCAGAAGCAGAATGGAGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CAA 90 bp CAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACATTGTCTCCTGTCACACAGCTTGTATTaGAATGAACCAGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: QRHCLKAQGTSGHPHCLLSHSLY*NEPGET
Trigger: AGTCTCTCCTGGTTCATTCAAATACAAGCTGTGTGA...CAGGAGACAATGTGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCACCAGACTCACACAGCTaGTATTTGAATGAACCAGGA +
Preference number: 5 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPPDSHS*YLNEPG
Trigger: TCCTGGTTCATTCAAATACAAGCTGTGTGAGTCTGG...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp ACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTTATTCCTGCTGGATTaGCAGCCACGGCTCTGGATC +
Preference number: 5 (lower is better)
Translates to: TITHVHSGACFCPVRHTSLFLLD*QPRLWI
Trigger: GATCCAGAGCCGTGGCTGCAAATCCAGCAGGAATAA...GGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp CCCGGCTTGCCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTAAGCTCCCATCATTCTaGCATCGCTACTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: PGLPCLEMQNLKAAVTITKLPSF*HRYCHQ
Trigger: TTGGTGGCAGTAGCGATGCAAGAATGATGGGAGCTT...AGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp AAGAGAAGCTCCAAGGTGACGCCCACTCTAGGACAAGATGATGGGGAGGAGGTGACACTCATCACTTCATaGTATACATGCAGGGCGTAC +
Preference number: 5 (lower is better)
Translates to: KRSSKVTPTLGQDDGEEVTLITS*YTCRAY
Trigger: GTACGCCCTGCATGTATACAATGAAGTGATGAGTGT...CACCTCCTCCCCATCATCTTGTCCTAGAGTGGGCGTCACCTTGGAGCTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000398122.7
ENST00000564563.1
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CAA 90 bp CAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGTCAGATTAGGGCAGTaGATATGCAAGGGGAAAATG +
Preference number: 5 (lower is better)
Translates to: QWSLLLSCQTYLLPPREAVRLGQ*ICKGKM
Trigger: CATTTTCCCCTTGCATATCAACTGCCCTAATCTGAC...AGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAGTGAGTTTACAAAGATGGCTTaGGAGGGGTGCAAATGCTAC +
Preference number: 5 (lower is better)
Translates to: ACFCPVRHTSCHHEKLSEFTKMA*EGCKCY
Trigger: GTAGCATTTGCACCCCTCCAAAGCCATCTTTGTAAA...CTCACTCAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp CCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACTCATACTCTCCCCGGTaGATGAAATCTGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: PCLEMQNLKAAVTITHVHSYSPR*MKSAVT
Trigger: GGTGACAGCAGATTTCATCAACCGGGGAGAGTATGA...GTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CAA 90 bp AGCTGTAGGCACTGCTGGTGGTCTTGCCAACATACTGCCCATTCCGGTAAATGGCTTGAGATGCAGAATTaGAAAGCAGCTGTCACCATC +
Preference number: 5 (lower is better)
Translates to: SCRHCWWSCQHTAHSGKWLEMQN*KAAVTI
Trigger: GATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAG...CCATTTACCGGAATGGGCAGTATGTTGGCAAGACCACCAGCAGTGCCTACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CAA 90 bp ATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAATGCAACGTACACCCTTaGGACTCAGAACTCTCAGTG +
Preference number: 5 (lower is better)
Translates to: IRHTATPPELIGCSKKMECNVHP*DSELSV
Trigger: CACTGAGAGTTCTGAGTCCAAAGGGTGTACGTTGCA...TTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp CCTAGGTTCAGATGGCATACACCGACAAGAGAAGGCAGAGACCATCCTTCGTGGCCAGACTCACACAGCTaGTATTTGAATGAACCAGGA +
Preference number: 5 (lower is better)
Translates to: PRFRWHTPTREGRDHPSWPDSHS*YLNEPG
Trigger: TCCTGGTTCATTCAAATACAAGCTGTGTGAGTCTGG...CCACGAAGGATGGTCTCTGCCTTCTCTTGTCGGTGTATGCCATCTGAACCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp ACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTCATTCAGCAAATATTaGAGGGTGGCTGGGCATGGT +
Preference number: 5 (lower is better)
Translates to: TITHVHSGACFCPVRHTSSFSKY*RVAGHG
Trigger: ACCATGCCCAGCCACCCTCAAATATTTGCTGAATGA...GGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565186.5
CDS-3UTR CAA 90 bp AAGTTTCACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGCTTGAGATGCAGAATTaGAAAGCAGCTGTCACCATC +
Preference number: 5 (lower is better)
Translates to: KFHLGKTETLPESAGHFWLEMQN*KAAVTI
Trigger: GATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAG...CCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGTGAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp ACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCCTTGAGATGCAGAATTaGAAAGCAGCTGTCACCATC +
Preference number: 5 (lower is better)
Translates to: TITHVHSGACFCPVRHTSLEMQN*KAAVTI
Trigger: GATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAG...GGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CAA 90 bp AGCTTTCTACCCCACGCCCATTGTTCCGAAGAAGGAGAGGCTATGTGGGGCGGAAACACTGTGGCTTACTaGTTTACTCAACTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: SFLPHAHCSEEGEAMWGGNTVAY*FTQLRK
Trigger: CTTTCTTAGTTGAGTAAACAAGTAAGCCACAGTGTT...TCCGCCCCACATAGCCTCTCCTTCTTCGGAACAATGGGCGTGGGGTAGAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CAA 90 bp ACCTTGGGAAAACAGAGACACTGCCTGAAAGCGCAGGGCACTTCTGGGCACCCAAAACAGTGCATAATTTaGGACACAGCATCAGATTTC +
Preference number: 5 (lower is better)
Translates to: TLGKQRHCLKAQGTSGHPKQCII*DTASDF
Trigger: GAAATCTGATGCTGTGTCCAAAATTATGCACTGTTT...TGGGTGCCCAGAAGTGCCCTGCGCTTTCAGGCAGTGTCTCTGTTTTCCCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp ATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAAGAACAGCTAAGATGCTaGGACACTAGACAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: IRHTATPPELIGCSKKMEEQLRC*DTRQRQ
Trigger: TTGCCTCTGTCTAGTGTCCAAGCATCTTAGCTGTTC...TTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp CAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGGAATGAGGAGGCTGTGGTaGTCCCTCCTTATTCCTGCT +
Preference number: 5 (lower is better)
Translates to: QGRRLTFKCMQRQVIYCGMRRLW*SLLIPA
Trigger: AGCAGGAATAAGGAGGGACAACCACAGCCTCCTCAT...TCCACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp GAAGGAGGAACGGCTGAACTTTGGACAGCTGAGAGAAAAGCAGCATTGTTTCCATTCACTCAGCTGTGGTaGCCACTTGCAAAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: EGGTAELWTAERKAALFPFTQLW*PLAKEA
Trigger: AGCCTCTTTTGCAAGTGGCAACCACAGCTGAGTGAA...TGGAAACAATGCTGCTTTTCTCTCAGCTGTCCAAAGTTCAGCCGTTCCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564563.1
CDS-3UTR CAA 90 bp TCTTCAGAGTTCCTGAATGAGAGCTTTTCTGGCTTCAGTACCAATGATCACAGACGAGGGCCAATCAGATaGAGGGCTGTGTACTTCCAG +
Preference number: 5 (lower is better)
Translates to: SSEFLNESFSGFSTNDHRRGPIR*RAVYFQ
Trigger: CTGGAAGTACACAGCCCTCAATCTGATTGGCCCTCG...TCTGTGATCATTGGTACTGAAGCCAGAAAAGCTCTCATTCAGGAACTCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp ATCCGACACACGGCAACCCCACCAGAACTAATAGGCTGCTCCAAGAAAATGGAAACACTCATCACTTCATaGTATACATGCAGGGCGTAC +
Preference number: 5 (lower is better)
Translates to: IRHTATPPELIGCSKKMETLITS*YTCRAY
Trigger: GTACGCCCTGCATGTATACAATGAAGTGATGAGTGT...TTCCATTTTCTTGGAGCAGCCTATTAGTTCTGGTGGGGTTGCCGTGTGTCGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR CAA 90 bp CTGTCACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATAACACTCATCACTTCATaGTATACATGCAGGGCGTAC +
Preference number: 5 (lower is better)
Translates to: LSPSLMSTVELASVLSDITLITS*YTCRAY
Trigger: GTACGCCCTGCATGTATACAATGAAGTGATGAGTGT...TATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGTGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CAA 90 bp TCTGAATCATGGTCGTCCAGGATGAACATGGTGAGGCGTTTATACACTCCATTCTCATACTCTCCCCGGTaGATGAAATCTGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: SESWSSRMNMVRRLYTPFSYSPR*MKSAVT
Trigger: GGTGACAGCAGATTTCATCAACCGGGGAGAGTATGA...GAATGGAGTGTATAAACGCCTCACCATGTTCATCCTGGACGACCATGATTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564563.1
ENST00000565186.5
CDS-3UTR CAA 90 bp ACCCAAAGTCACCCAGGATCTCTAGAAAAGATCCCACTTACTGAAGTGCCTCGGCTTGAGATGCAGAATTaGAAAGCAGCTGTCACCATC +
Preference number: 5 (lower is better)
Translates to: TQSHPGSLEKIPLTEVPRLEMQN*KAAVTI
Trigger: GATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAG...CCGAGGCACTTCAGTAAGTGGGATCTTTTCTAGAGATCCTGGGTGACTTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CAA 90 bp AGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCACGAGAAGCTGAACACTGTGGCTTACTaGTTTACTCAACTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: SGACFCPVRHTSCHHEKLNTVAY*FTQLRK
Trigger: CTTTCTTAGTTGAGTAAACAAGTAAGCCACAGTGTT...CAGCTTCTCGTGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp ACCATCACTCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTATCTAAGTTTCACCTaGGGAAAACAGAGACACTGC +
Preference number: 5 (lower is better)
Translates to: TITHVHSGACFCPVRHTSYLSFT*GKQRHC
Trigger: GCAGTGTCTCTGTTTTCCCAAGGTGAAACTTAGATA...GGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGAGTGATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCGTCAGATTAGGGCAGTaGATATGCAAGGGGAAAATG +
Preference number: 5 (lower is better)
Translates to: GKAVSSLMQRTPFGLRTLVRLGQ*ICKGKM
Trigger: CATTTTCCCCTTGCATATCAACTGCCCTAATCTGAC...GAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp ATGCAGAATTTGAAAGCAGCTGTCACCATCACTCATGTCCACAGTGGAGCTTGCCTTGAGATGCAGAATTaGAAAGCAGCTGTCACCATC +
Preference number: 5 (lower is better)
Translates to: MQNLKAAVTITHVHSGACLEMQN*KAAVTI
Trigger: GATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAG...GCAAGCTCCACTGTGGACATGAGTGATGGTGACAGCTGCTTTCAAATTCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000567046.5
ENST00000568530.5
CDS-3UTR CAA 90 bp CCCGGCTTGCCCTGCCTTGAGATGCAGAATTTGAAAGCAGCTGTCACCATCACTAACACTGTGGCTTACTaGTTTACTCAACTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: PGLPCLEMQNLKAAVTITNTVAY*FTQLRK
Trigger: CTTTCTTAGTTGAGTAAACAAGTAAGCCACAGTGTT...AGTGATGGTGACAGCTGCTTTCAAATTCTGCATCTCAAGGCAGGGCAAGCCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp TCATGTCCACAGTGGAGCTTGCTTCTGTCCTGTCAGACATACCTCCTGCCACCAAAACAGTGCATAATTTaGGACACAGCATCAGATTTC +
Preference number: 5 (lower is better)
Translates to: SCPQWSLLLSCQTYLLPPKQCII*DTASDF
Trigger: GAAATCTGATGCTGTGTCCAAAATTATGCACTGTTT...TGGTGGCAGGAGGTATGTCTGACAGGACAGAAGCAAGCTCCACTGTGGACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp GTTAACTGCTTGTCTCCACTACAGACCAGAGAACGTCCATGCGATGCCTCTTATTATCTAAGTTTCACCTaGGGAAAACAGAGACACTGC +
Preference number: 5 (lower is better)
Translates to: VNCLSPLQTRERPCDASYYLSFT*GKQRHC
Trigger: GCAGTGTCTCTGTTTTCCCAAGGTGAAACTTAGATA...ATAAGAGGCATCGCATGGACGTTCTCTGGTCTGTAGTGGAGACAAGCAGTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp GGAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACAGTGGAAACCTTGCTaGGTGGAGACAGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: GKATHKAIWFFPFKHCGLQWKPC*VETVHS
Trigger: ACTGTGCACTGTCTCCACCAAGCAAGGTTTCCACTG...TAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CAA 90 bp CAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGGATCACACAGCTTGTATTaGAATGAACCAGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: QGRRLTFKCMQRQVIYCGSHSLY*NEPGET
Trigger: AGTCTCTCCTGGTTCATTCAAATACAAGCTGTGTGA...TCCACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp GGAAAAGCGGTCTCTAGCCTTATGCAACGTACACCCTTTGGACTCAGAACTCTCAAATACTCAGTTGTCTaGAAAAGTGTACTGGTAGTG +
Preference number: 5 (lower is better)
Translates to: GKAVSSLMQRTPFGLRTLKYSVV*KSVLVV
Trigger: CACTACCAGTACACTTTTCAAGACAACTGAGTATTT...GAGAGTTCTGAGTCCAAAGGGTGTACGTTGCATAAGGCTAGAGACCGCTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CAA 90 bp AAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTTTCATACTCTCCCCGGTaGATGAAATCTGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: KATHKAIWFFPFKHCGLLSYSPR*MKSAVT
Trigger: GGTGACAGCAGATTTCATCAACCGGGGAGAGTATGA...AAGTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000565186.5
ENST00000568530.5
CDS-3UTR CAA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCAACCCTGGGTCTCCGTTaGAGGCCAATATACTTTGTG +
Preference number: 5 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPTLGLR*RPIYFV
Trigger: CACAAAGTATATTGGCCTCAAACGGAGACCCAGGGT...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp CAAGGGAGGAGGCTAACTTTCAAATGCATGCAACGGCAGGTAATATACTGTGGAGTTTTAGTTACTTTCTaGCAAACAGCAGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: QGRRLTFKCMQRQVIYCGVLVTF*QTAVQE
Trigger: TTCCTGGACTGCTGTTTGCAAGAAAGTAACTAAAAC...TCCACAGTATATTACCTGCCGTTGCATGCATTTGAAAGTTAGCCTCCTCCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5
CDS-3UTR CAA 90 bp GGAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTAACACTCATCACTTCATaGTATACATGCAGGGCGTAC +
Preference number: 5 (lower is better)
Translates to: GKATHKAIWFFPFKHCGLTLITS*YTCRAY
Trigger: GTACGCCCTGCATGTATACAATGAAGTGATGAGTGT...TAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288050.9
ENST00000564563.1
ENST00000568530.5
CDS-3UTR CAA 90 bp GAAAAGCAACACACAAGGCAATATGGTTTTTCCCTTTCAAACACTGTGGCTTACTCTAAGCTCCAGTTCTaGGTGTGCAAAGGAAATTCT +
Preference number: 5 (lower is better)
Translates to: EKQHTRQYGFSLSNTVAYSKLQF*VCKGNS
Trigger: AGAATTTCCTTTGCACACCAAGAACTGGAGCTTAGA...GTAAGCCACAGTGTTTGAAAGGGAAAAACCATATTGCCTTGTGTGTTGCTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288050.9
CDS-3UTR CAA 90 bp AATGGAAGGATGTCCCTTAATACACTTATAGACCTATCAGAGCTAATGCTTCCAGTTTTAGTTACTTTCTaGCAAACAGCAGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: NGRMSLNTLIDLSELMLPVLVTF*QTAVQE
Trigger: TTCCTGGACTGCTGTTTGCAAGAAAGTAACTAAAAC...TGGAAGCATTAGCTCTGATAGGTCTATAAGTGTATTAAGGGACATCCTTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288050.9
ENST00000568530.5