RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE4A (Homo sapiens)

Ensembl gene IDs: ENSG00000065989

Ensembl transcript IDs: ENST00000293683.9, ENST00000344979.7, ENST00000380702.7, ENST00000440014.6, ENST00000586275.1, ENST00000589073.1, ENST00000590407.1, ENST00000591971.5, ENST00000592685.5

Found 409 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCAAACTGGAACTTGTCAGGCAGGGGTGGGTGGCCTGGCCCCCTTaGCTCCTCCTCGGGTGGCGGAGATGGGCTCTGCCGGATGGCGCT +
Preference number: 1 (lower is better)
Translates to: LKLELVRQGWVAWPP*LLLGWRRWALPDGA
Trigger: AGCGCCATCCGGCAGAGCCCATCTCCGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCACCCACCCCTGCCTGACAAGTTCCAGTTTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CCA 90 bp GAGTGGAGGAGGTCTAGGGCCCTCCTCAAATCCCAGGCCCGAGGCTaGCGGTGTGAACGCTCCCTTCCATACCACCCCCGTATCCTAAAG +
Preference number: 1 (lower is better)
Translates to: EWRRSRALLKSQARG*RCERSLPYHPRILK
Trigger: CTTTAGGATACGGGGGTGGTATGGAAGGGAGCGTTCACACCGCCAGCCTCGGGCCTGGGATTTGAGGAGGGCCCTAGACCTCCTCCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR CCA 90 bp CCTCCCGGGACGAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTaGACTGTGCCTGCTGTGTCAAATACACTGCCTCCAGCTCGGCCT +
Preference number: 1 (lower is better)
Translates to: PPGTRTHPEPQVHCL*TVPAVSNTLPPARP
Trigger: AGGCCGAGCTGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR GCA 90 bp GGACGAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTGGACTGTaGCTGCTGTGTCAAATACACTGCCTCCAGCTCGGCCTCCAGGGA +
Preference number: 1 (lower is better)
Translates to: GRELIRSHRCTACGL*LLCQIHCLQLGLQG
Trigger: TCCCTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CCA 90 bp TCGGCCTCCAGGGATGCTTCCTGTGCCATAACTTCCAACGACTCCTaGGCCGGGGATGCCTCCCAGGCTATGGTTGCATCCAGAGCTTCC +
Preference number: 1 (lower is better)
Translates to: SASRDASCAITSNDS*AGDASQAMVASRAS
Trigger: GGAAGCTCTGGATGCAACCATAGCCTGGGAGGCATCCCCGGCCCAGGAGTCGTTGGAAGTTATGGCACAGGAAGCATCCCTGGAGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR GCA 90 bp TGCCTGCTGTGTCAAATACACTGCCTCCAGCTCGGCCTCCAGGGATaGTTCCTGTGCCATAACTTCCAACGACTCCTGGGCCGGGGATGC +
Preference number: 1 (lower is better)
Translates to: CLLCQIHCLQLGLQG*FLCHNFQRLLGRGC
Trigger: GCATCCCCGGCCCAGGAGTCGTTGGAAGTTATGGCACAGGAAGCATCCCTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACAGCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR GCA 90 bp GAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTGGACTGTGCCTaGTGTGTCAAATACACTGCCTCCAGCTCGGCCTCCAGGGATGCT +
Preference number: 1 (lower is better)
Translates to: ENSSGATGALPVDCA*CVKYTASSSASRDA
Trigger: AGCATCCCTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR GCA 90 bp CTGGCCCTGCCTCATCCAAGGTGCAGGCGGCCACTGCAACCCCCTTaGCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGAGGAGAAG +
Preference number: 1 (lower is better)
Translates to: LALPHPRCRRPLQPP*LWPWELLRQKQEEK
Trigger: CTTCTCCTCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGCCGCCTGCACCTTGGATGAGGCAGGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR TCA 90 bp GGATGCCTCCCAGGCTATGGTTGCATCCAGAGCTTCCTCGACTCCTaGCAATCCCTGCGCAGTCAATGCCTCTTGGGCTGTGCACGGTAT +
Preference number: 1 (lower is better)
Translates to: GCLPGYGCIQSFLDS*QSLRSQCLLGCARY
Trigger: ATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGTCGAGGAAGCTCTGGATGCAACCATAGCCTGGGAGGCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR GCA 90 bp CACAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTaGCTCCAGCTCGGCCTCCAGGGATGCTTCCTGTGCCATAACTTC +
Preference number: 1 (lower is better)
Translates to: HRCTACGLCLLCQIH*LQLGLQGCFLCHNF
Trigger: GAAGTTATGGCACAGGAAGCATCCCTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR GCA 90 bp CAGGCTATGGTTGCATCCAGAGCTTCCTCGACTCCTGACAATCCCTaGGCAGTCAATGCCTCTTGGGCTGTGCACGGTATCTGGGCCATT +
Preference number: 1 (lower is better)
Translates to: QAMVASRASSTPDNP*AVNASWAVHGIWAI
Trigger: AATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGTCGAGGAAGCTCTGGATGCAACCATAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CCA 90 bp CTGCCTCATCCAAGGTGCAGGCGGCCACTGCAACCCCCTTGCCTGTaGCCGTGGGAATTATTAAGGCAGAAACAAGAGGAGAAGCAGCTA +
Preference number: 1 (lower is better)
Translates to: LPHPRCRRPLQPPCL*PWELLRQKQEEKQL
Trigger: TAGCTGCTTCTCCTCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGCCGCCTGCACCTTGGATGAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR CCA 90 bp AAAATTCAAAGTGAACCCAAAGTGGAAGGGAAAGGGGATGGAGAGTaGAGGAGGTCTAGGGCCCTCCTCAAATCCCAGGCCCGAGGCTGG +
Preference number: 1 (lower is better)
Translates to: KIQSEPKVEGKGDGE*RRSRALLKSQARGW
Trigger: CCAGCCTCGGGCCTGGGATTTGAGGAGGGCCCTAGACCTCCTCCACTCTCCATCCCCTTTCCCTTCCACTTTGGGTTCACTTTGAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR GCA 90 bp CCTCGACTCCTGACAATCCCTGCGCAGTCAATGCCTCTTGGGCTGTaGACGGTATCTGGGCCATTGATATTTCTTCCTCCTCTTCCTCCT +
Preference number: 1 (lower is better)
Translates to: PRLLTIPAQSMPLGL*TVSGPLIFLPPLPP
Trigger: AGGAGGAAGAGGAGGAAGAAATATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGTCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CCA 90 bp GAGAGGGAGAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTaGTGCCAGGGTGGAAGGAAGGGCTGCCCAGGAATGAGAATGAGG +
Preference number: 1 (lower is better)
Translates to: ERERLGKVRMEEKLF*CQGGRKGCPGMRMR
Trigger: CCTCATTCTCATTCCTGGGCAGCCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTCTCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR CCA 90 bp AGAGCTTCCTCGACTCCTGACAATCCCTGCGCAGTCAATGCCTCTTaGGCTGTGCACGGTATCTGGGCCATTGATATTTCTTCCTCCTCT +
Preference number: 1 (lower is better)
Translates to: RASSTPDNPCAVNAS*AVHGIWAIDISSSS
Trigger: AGAGGAGGAAGAAATATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGTCGAGGAAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR TCA 90 bp ATTGGAGACAAGATCGAAGGATTATTGATCAACGGACCGAATGACTaGTCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTG +
Preference number: 1 (lower is better)
Translates to: IGDKIEGLLINGPND*SSKWTIHKQLTEVL
Trigger: CAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCATTCGGTCCGTTGATCAATAATCCTTCGATCTTGTCTCCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR TCA 90 bp TTTAATTGGAGACAAGATCGAAGGATTATTGATCAACGGACCGAATaGCTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGT +
Preference number: 1 (lower is better)
Translates to: FNWRQDRRIIDQRTE*LIVKVDNTQAAYRG
Trigger: ACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCATTCGGTCCGTTGATCAATAATCCTTCGATCTTGTCTCCAATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR GCA 90 bp GGTGGCCTGGCCCCCTTGACTCCTCCTCGGGTGGCGGAGATGGGCTCTGCCGGATCCGTGGCCAGCACCTaGGGGCAAGGGGGCGTCACT +
Preference number: 2 (lower is better)
Translates to: GGLAPLTPPRVAEMGSAGSVAST*GQGGVT
Trigger: AGTGACGCCCCCTTGCCCGCAGGTGCTGGCCACGGA...TCCGGCAGAGCCCATCTCCGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CAA 90 bp GCTCAAACTGGAACTTGTCAGGCAGGGGTGGGTGGCCTGGCCCCCTaGACTCCTCCTCGGGTGGCGGAGATGGGCTCTGCCGGATGGCGC +
Preference number: 2 (lower is better)
Translates to: AQTGTCQAGVGGLAP*TPPRVAEMGSAGWR
Trigger: GCGCCATCCGGCAGAGCCCATCTCCGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCACCCACCCCTGCCTGACAAGTTCCAGTTTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR TCA 90 bp CAACGACTCCTGGGCCGGGGATGCCTCCCAGGCTATGGTTGCATCCAGAGCTTCGTGGCCTGGCCCCCTTaGCTCCTCCTCGGGTGGCGG +
Preference number: 2 (lower is better)
Translates to: QRLLGRGCLPGYGCIQSFVAWPP*LLLGWR
Trigger: CCGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCAC...GAAGCTCTGGATGCAACCATAGCCTGGGAGGCATCCCCGGCCCAGGAGTCGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR TCA 90 bp GGGTGGCGGAGATGGGCTCTGCCGGATGGCGCTGTAGTACCAGTCCCGGTTGTCGCCGCTGGCGCTTGCTaGGGTTCTGGAAGATGTCGC +
Preference number: 2 (lower is better)
Translates to: GWRRWALPDGAVVPVPVVAAGAC*GSGRCR
Trigger: GCGACATCTTCCAGAACCTCAGCAAGCGCCAGCGGC...GACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR TCA 90 bp GGGTGGCGGAGATGGGCTCTGCCGGATGGCGCTGTAGTACCAGTCCCGGTTGTCCCGCTCTGTCCAGGTTaGGGGTTCCTCTGGGACTCA +
Preference number: 2 (lower is better)
Translates to: GWRRWALPDGAVVPVPVVPLCPG*GFLWDS
Trigger: TGAGTCCCAGAGGAACCCTCAACCTGGACAGAGCGG...GACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR CCA 90 bp AATTCCTCCCGGGACGAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTGGACCTCGGGTGGCGGAGATaGGCTCTGCCGGATGGCGCT +
Preference number: 2 (lower is better)
Translates to: NSSRDENSSGATGALPVDLGWRR*ALPDGA
Trigger: AGCGCCATCCGGCAGAGCCCATCTCCGCCACCCGAG...GTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR CCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCAGACTCCCCAGGCGGCTaGAAGACTGAGCCTGGAACT +
Preference number: 2 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRADSPGG*KTEPGT
Trigger: AGTTCCAGGCTCAGTCTTCCAGCCGCCTGGGGAGTC...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCATCAGAGTGTGGAAGGTaGGGTCCGGAGGACCCTGGA +
Preference number: 2 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRASECGR*GPEDPG
Trigger: TCCAGGGTCCTCCGGACCCCACCTTCCACACTCTGA...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR TCA 90 bp GTAGAAGCCGCCCGCTCTGTCCAGGTTGAGGGTTCCTCTGGGACTCAGACCCACCGCCCACCATGTCGATaGCCATCTTGCGTAGGCTCT +
Preference number: 2 (lower is better)
Translates to: VEAARSVQVEGSSGTQTHRPPCR*PSCVGS
Trigger: AGAGCCTACGCAAGATGGTCATCGACATGGTGGGCG...GTGGGTCTGAGTCCCAGAGGAACCCTCAACCTGGACAGAGCGGGCGGCTTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR CCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCAGTGAGGGGAGGGATTTaGAAGTGGAAAGCGGGAACC +
Preference number: 2 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRAVRGGI*KWKAGT
Trigger: GGTTCCCGCTTTCCACTTCCAAATCCCTCCCCTCAC...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGCCAGGATGGGGGTTCTaGGCGCCTGGCCCTGCCTCA +
Preference number: 2 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGPGWGF*APGPAS
Trigger: TGAGGCAGGGCCAGGCGCCCAGAACCCCCATCCTGG...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR GCA 90 bp GCCACAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCATCTTGCGTAGGCTCTaGCGCTGGCGCTTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: ATGALPVDCACCVKYTASILRRL*RWRLLR
Trigger: CCTCAGCAAGCGCCAGCGGCAGAGCCTACGCAAGAT...GGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CAA 90 bp CCTGGCCCTGCCTCATCCAAGGTGCAGGCGGCCACTGCAACCCCCTaGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: PGPASSKVQAATATP*PVAVGIIKAETRGE
Trigger: TTCTCCTCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGCCGCCTGCACCTTGGATGAGGCAGGGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR GCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCGGTGCAGGCGGCCACTaGAACCCCCTTGCCTGTGGC +
Preference number: 2 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSAGAGGH*NPLACG
Trigger: GCCACAGGCAAGGGGGTTGCAGTGGCCGCCTGCACC...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR GCA 90 bp CAACGACTCCTGGGCCGGGGATGCCTCCCAGGCTATGGTTGCATCCAGAGCTTCACTCCTGACAATCCCTaGGCAGTCAATGCCTCTTGG +
Preference number: 2 (lower is better)
Translates to: QRLLGRGCLPGYGCIQSFTPDNP*AVNASW
Trigger: CCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGT...GAAGCTCTGGATGCAACCATAGCCTGGGAGGCATCCCCGGCCCAGGAGTCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR TCA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGACCGAGGCTGGCGGTGTaGACGCTCCCTTCCATACCA +
Preference number: 2 (lower is better)
Translates to: ATATPLPVAVGIIKAETRPRLAV*TLPSIP
Trigger: TGGTATGGAAGGGAGCGTTCACACCGCCAGCCTCGG...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCGGCCCCACACCTGCTTaGGCCCAGGTAGAGACTCCC +
Preference number: 2 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSAGPTPA*AQVETP
Trigger: GGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCC...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCTCCCAGGCCCGAGGCTaGCGGTGTGAACGCTCCCTT +
Preference number: 2 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSASQARG*RCERSL
Trigger: AAGGGAGCGTTCACACCGCCAGCCTCGGGCCTGGGA...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGGGGTTCTGGGCGCCTaGCCCTGCCTCATCCAAGGT +
Preference number: 2 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLGVLGA*PCLIQG
Trigger: ACCTTGGATGAGGCAGGGCCAGGCGCCCAGAACCCC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR TCA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGACCCCGTATCCTAAAGTaGACAGCTCCCCCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: ATATPLPVAVGIIKAETRPRILK*TAPPAP
Trigger: GGGAGCTGGGGGAGCTGTTCACTTTAGGATACGGGG...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR TCA 90 bp AATTCCTCCCGGGACGAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTGGACTCAATAAAACCCACCTaGGACTTCTCCACGGAGGCA +
Preference number: 2 (lower is better)
Translates to: NSSRDENSSGATGALPVDSIKPT*DFSTEA
Trigger: TGCCTCCGTGGAGAAGTCTCAGGTGGGTTTTATTGA...GTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR CCA 90 bp CTTGGGCTGTGCACGGTATCTGGGCCATTGATATTTCTTCCTCCTCTTCCTCCTCGTAGGCTCTGCCGCTaGCGCTTGCTGAGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: LGLCTVSGPLIFLPPLPPRRLCR*RLLRFW
Trigger: CCAGAACCTCAGCAAGCGCCAGCGGCAGAGCCTACG...AGGAGGAAGAGGAGGAAGAAATATCAATGGCCCAGATACCGTGCACAGCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR TCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGGAGGACAAGAGTCTTTaGGGCAGAGGAGGAGGTGGT +
Preference number: 2 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGEDKSL*GRGGGG
Trigger: ACCACCTCCTCCTCTGCCTCAAAGACTCTTGTCCTC...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR TCA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGAGCTCCCCCAGCTCCCTaGCTTTCTAGTCAGTATCGC +
Preference number: 2 (lower is better)
Translates to: ATATPLPVAVGIIKAETRAPPAP*LSSQYR
Trigger: GCGATACTGACTAGAAAGTCAGGGAGCTGGGGGAGC...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR GCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAACTGCCTCATCCAAGGTaGAGGCGGCCACTGCAACCC +
Preference number: 2 (lower is better)
Translates to: ARQGTDGGEIILVPGWKELPHPR*RRPLQP
Trigger: GGGTTGCAGTGGCCGCCTGCACCTTGGATGAGGCAG...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCACTGAGCCTGGAACTTaGGGGGCAGTGGGGGAAGGT +
Preference number: 2 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSATEPGT*GAVGEG
Trigger: ACCTTCCCCCACTGCCCCCCAAGTTCCAGGCTCAGT...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR CAA 90 bp GGAGAGGGAGAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTaGGTGCCAGGGTGGAAGGAAGGGCTGCCCAGGAATGAGAATGAG +
Preference number: 2 (lower is better)
Translates to: GEGEARQGTDGGEII*VPGWKEGLPRNENE
Trigger: CTCATTCTCATTCCTGGGCAGCCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTCTCCCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGGGAGGGATTTGGAAGTaGAAAGCGGGAACCAGGAAC +
Preference number: 2 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGGGIWK*KAGTRN
Trigger: GTTCCTGGTTCCCGCTTTCCACTTCCAAATCCCTCC...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CCA 90 bp AGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGGAAAGGGGATGGAGAGTaGAGGAGGTCTAGGGCCCTC +
Preference number: 2 (lower is better)
Translates to: RQGTDGGEIILVPGWKEGKGDGE*RRSRAL
Trigger: GAGGGCCCTAGACCTCCTCCACTCTCCATCCCCTTT...CCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGCTGTGATCAGAGTGTaGAAGGTGGGGTCCGGAGGA +
Preference number: 2 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLAVIRV*KVGSGG
Trigger: TCCTCCGGACCCCACCTTCCACACTCTGATCACAGC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR TCA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCAGGGGCAGGCGATGAATaGGGTCGGTCCAGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTAGAGDE*GRSSCR
Trigger: TCTGCAGCTGGACCGACCTCATTCATCGCCTGCCCC...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR TCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTGTAGGGGGCAGGCGATaGATGAGGTCGGTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAVGGRR*MRSVQL
Trigger: CAGCTGGACCGACCTCATTCATCGCCTGCCCCCTAC...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR GCA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCAAGGAGGCCCCACACCTaGTTGGGCCCAGGTAGAGAC +
Preference number: 2 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTARRPHT*LGPGRD
Trigger: GTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCTCCT...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CCA 90 bp CTTGGGCTGTGCACGGTATCTGGGCCATTGATATTTCTTCCTCCTCTTCCTCCTGTGTCCAAGATCTCCTaGGCATCTGGGTGGACAAGG +
Preference number: 2 (lower is better)
Translates to: LGLCTVSGPLIFLPPLPPVSKIS*ASGWTR
Trigger: CCTTGTCCACCCAGATGCCCAGGAGATCTTGGACAC...AGGAGGAAGAGGAGGAAGAAATATCAATGGCCCAGATACCGTGCACAGCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR CCA 90 bp CAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCAGCTGCTGTGCACGGTATCTaGGCCATTGATATTTCTTCC +
Preference number: 2 (lower is better)
Translates to: QVHCLWTVPAVSNTLPPAAVHGI*AIDISS
Trigger: GGAAGAAATATCAATGGCCCAGATACCGTGCACAGC...AGCTGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR GCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACAGGCTACAGTACCGTGTaGTCAGAATTGGGTAGGGGG +
Preference number: 2 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTGYSTV*SELGRG
Trigger: CCCCCTACCCAATTCTGAGCACACGGTACTGTAGCC...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACACAGCCCCGCCTAGAATaGCTATTCCTGACCACGTTC +
Preference number: 2 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTQPRLE*LFLTTF
Trigger: GAACGTGGTCAGGAATAGCCATTCTAGGCGGGGCTG...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR CAA 90 bp AACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACAGTTaGTATAATACAGCAGGAACAGAGACTCTCCCAACGGGAGACCTC +
Preference number: 2 (lower is better)
Translates to: NNSGESTLFPGLWYS*YNTAGTETLPTGDL
Trigger: GAGGTCTCCCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR GCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGTATCGCCGGGATTGTaGAAAATCAAGCGGAAGACT +
Preference number: 2 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLVSPGL*KIKRKT
Trigger: AGTCTTCCGCTTGATTTTGCACAATCCCGGCGATAC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR GCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGGGTGGAAGGAAGGGCTaGCCAGGAATGAGAATGAGG +
Preference number: 2 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRGGRKG*PGMRMR
Trigger: CCTCATTCTCATTCCTGGGCAGCCCTTCCTTCCACC...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR TCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCGGAGAAAATTCAAAGTaGACCCAAAGTGGAAGGGAA +
Preference number: 2 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSAGENSK*TQSGRE
Trigger: TTCCCTTCCACTTTGGGTTCACTTTGAATTTTCTCC...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTCCTTGCCTGTGGCCGTaGGAATTATTAAGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAPCLWP*ELLRQK
Trigger: TTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGG...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR GCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGGGAGAAAAATGGTCTTaGATCTGTCTGCCGTATTGC +
Preference number: 2 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRGEKWS*ICLPYC
Trigger: GCAATACGGCAGACAGATGCAAGACCATTTTTCTCC...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR GCA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCAGGTATACACCATTATTaGTTCCTCCTAGGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTAGIHHY*FLLGQK
Trigger: CTTTTGCCCTAGGAGGAAGCAATAATGGTGTATACC...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR GCA 72 bp GGTGCGGCCAGGATGGGGGTTCTGGGCGCCTGGCCCTaGCTCATCCAAGGTGCAGGCGGCCACTGCAACCCC +
Preference number: 3 (lower is better)
Translates to: GAARMGVLGAWP*LIQGAGGHCNP
Trigger: GGGGTTGCAGTGGCCGCCTGCACCTTGGATGAGGCAGGGCCAGGCGCCCAGAACCCCCATCCTGGCCGCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR CCA 72 bp GTCAGCTCAAACTGGAACTTGTCAGGCAGGGGTGGGTaGCCTGGCCCCCTTGACTCCTCCTCGGGTGGCGGA +
Preference number: 3 (lower is better)
Translates to: VSSNWNLSGRGG*PGPLDSSSGGG
Trigger: TCCGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCACCCACCCCTGCCTGACAAGTTCCAGTTTGAGCTGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR CAA 90 bp AATTCCTCCCGGGACGAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTGGACCCCGCTCTGTCCAGGTaGAGGGTTCCTCTGGGACTC +
Preference number: 3 (lower is better)
Translates to: NSSRDENSSGATGALPVDPALSR*RVPLGL
Trigger: GAGTCCCAGAGGAACCCTCAACCTGGACAGAGCGGG...GTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR TCA 72 bp GGCCCTCCTCAAATCCCAGGCCCGAGGCTGGCGGTGTaGACGCTCCCTTCCATACCACCCCCGTATCCTAAA +
Preference number: 3 (lower is better)
Translates to: GPPQIPGPRLAV*TLPSIPPPYPK
Trigger: TTTAGGATACGGGGGTGGTATGGAAGGGAGCGTTCACACCGCCAGCCTCGGGCCTGGGATTTGAGGAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CAA 90 bp GTAGAAGCCGCCCGCTCTGTCCAGGTTGAGGGTTCCTCTGGGACTCAGACCCACATGTCGATGACCATCTaGCGTAGGCTCTGCCGCTGG +
Preference number: 3 (lower is better)
Translates to: VEAARSVQVEGSSGTQTHMSMTI*RRLCRW
Trigger: CCAGCGGCAGAGCCTACGCAAGATGGTCATCGACAT...GTGGGTCTGAGTCCCAGAGGAACCCTCAACCTGGACAGAGCGGGCGGCTTCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CCA 72 bp CCAACGACTCCTGGGCCGGGGATGCCTCCCAGGCTATaGTTGCATCCAGAGCTTCCTCGACTCCTGACAATC +
Preference number: 3 (lower is better)
Translates to: PTTPGPGMPPRL*LHPELPRLLTI
Trigger: GATTGTCAGGAGTCGAGGAAGCTCTGGATGCAACCATAGCCTGGGAGGCATCCCCGGCCCAGGAGTCGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR GCA 72 bp CTGTGCCATAACTTCCAACGACTCCTGGGCCGGGGATaGCTCCCAGGCTATGGTTGCATCCAGAGCTTCCTC +
Preference number: 3 (lower is better)
Translates to: LCHNFQRLLGRG*LPGYGCIQSFL
Trigger: GAGGAAGCTCTGGATGCAACCATAGCCTGGGAGGCATCCCCGGCCCAGGAGTCGTTGGAAGTTATGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR GCA 72 bp ACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTaGCTCCAGCTCGGCCTCCAGGGATGCTTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: TACGLCLLCQIH*LQLGLQGCFLC
Trigger: GCACAGGAAGCATCCCTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR GCA 72 bp CCCGGGACGAGAACTCATCCGGAGCCACAGGTGCACTaGCTGTGGACTGTGCCTGCTGTGTCAAATACACTG +
Preference number: 3 (lower is better)
Translates to: PGTRTHPEPQVH*LWTVPAVSNTL
Trigger: CAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CCA 72 bp AGGGATGCTTCCTGTGCCATAACTTCCAACGACTCCTaGGCCGGGGATGCCTCCCAGGCTATGGTTGCATCC +
Preference number: 3 (lower is better)
Translates to: RDASCAITSNDS*AGDASQAMVAS
Trigger: GGATGCAACCATAGCCTGGGAGGCATCCCCGGCCCAGGAGTCGTTGGAAGTTATGGCACAGGAAGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR CAA 90 bp GCCACAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCCGCAGTCAATGCCTCTaGGGCTGTGCACGGTATCTG +
Preference number: 3 (lower is better)
Translates to: ATGALPVDCACCVKYTASRSQCL*GCARYL
Trigger: CAGATACCGTGCACAGCCCAAGAGGCATTGACTGCG...GGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR CAA 90 bp GCCACAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCCCTCCCAGGCTATGGTaGCATCCAGAGCTTCCTCGA +
Preference number: 3 (lower is better)
Translates to: ATGALPVDCACCVKYTASPPRLW*HPELPR
Trigger: TCGAGGAAGCTCTGGATGCAACCATAGCCTGGGAGG...GGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR CAA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGAGGCCCCACACCTGCTaGGGCCCAGGTAGAGACTCC +
Preference number: 3 (lower is better)
Translates to: EARQGTDGGEIILVPGWKRPHTC*GPGRDS
Trigger: GGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR CCA 72 bp AGTGAACCCAAAGTGGAAGGGAAAGGGGATGGAGAGTaGAGGAGGTCTAGGGCCCTCCTCAAATCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: SEPKVEGKGDGE*RRSRALLKSQA
Trigger: GGCCTGGGATTTGAGGAGGGCCCTAGACCTCCTCCACTCTCCATCCCCTTTCCCTTCCACTTTGGGTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR GCA 72 bp CCTCATCCAAGGTGCAGGCGGCCACTGCAACCCCCTTaGCTGTGGCCGTGGGAATTATTAAGGCAGAAACAA +
Preference number: 3 (lower is better)
Translates to: PHPRCRRPLQPP*LWPWELLRQKQ
Trigger: TTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGCCGCCTGCACCTTGGATGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR GCA 72 bp TGTCAAATACACTGCCTCCAGCTCGGCCTCCAGGGATaGTTCCTGTGCCATAACTTCCAACGACTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: CQIHCLQLGLQG*FLCHNFQRLLG
Trigger: GCCCAGGAGTCGTTGGAAGTTATGGCACAGGAAGCATCCCTGGAGGCCGAGCTGGAGGCAGTGTATTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CCA 72 bp ACGAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTaGACTGTGCCTGCTGTGTCAAATACACTGCCTCCA +
Preference number: 3 (lower is better)
Translates to: TRTHPEPQVHCL*TVPAVSNTLPP
Trigger: TGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR CAA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGGGAGTATCGCCGGGATaGTGCAAAATCAAGCGGAAG +
Preference number: 3 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGGVSPG*CKIKRK
Trigger: CTTCCGCTTGATTTTGCACAATCCCGGCGATACTCC...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CAA 90 bp AATTCCTCCCGGGACGAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTGGACACGGTATCTGGGCCATaGATATTTCTTCCTCCTCTT +
Preference number: 3 (lower is better)
Translates to: NSSRDENSSGATGALPVDTVSGP*IFLPPL
Trigger: AAGAGGAGGAAGAAATATCAATGGCCCAGATACCGT...GTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CCA 72 bp TGCGCAGTCAATGCCTCTTGGGCTGTGCACGGTATCTaGGCCATTGATATTTCTTCCTCCTCTTCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: CAVNASWAVHGI*AIDISSSSSSS
Trigger: GGAGGAGGAAGAGGAGGAAGAAATATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR GCA 72 bp CCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTaGATCTGTCTGCCGTATTGCTCAGGGACTAGCTGG +
Preference number: 3 (lower is better)
Translates to: PNSPPWLGEKWS*ICLPYCSGTSW
Trigger: CCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR GCA 72 bp CTGACAATCCCTGCGCAGTCAATGCCTCTTGGGCTGTaGACGGTATCTGGGCCATTGATATTTCTTCCTCCT +
Preference number: 3 (lower is better)
Translates to: LTIPAQSMPLGL*TVSGPLIFLPP
Trigger: AGGAGGAAGAAATATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CCA 72 bp TCGACTCCTGACAATCCCTGCGCAGTCAATGCCTCTTaGGCTGTGCACGGTATCTGGGCCATTGATATTTCT +
Preference number: 3 (lower is better)
Translates to: STPDNPCAVNAS*AVHGIWAIDIS
Trigger: AGAAATATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR-3UTR CAA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAAGAGGACAAGAGTCTTaGAGGCAGAGGAGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: ARQGTDGGEIILVPGWKERGQES*RQRRRW
Trigger: CCACCTCCTCCTCTGCCTCAAAGACTCTTGTCCTCT...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CAA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGGAGGAGAAATTATTTaGGTGCCAGGGTGGAAGGAA +
Preference number: 3 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLGGEII*VPGWKE
Trigger: TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR CCA 72 bp TTCCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATaGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACT +
Preference number: 3 (lower is better)
Translates to: FLPNSPPWLGEK*SCICLPYCSGT
Trigger: AGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CAA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGGGTATACACCATTATaGCTTCCTCCTAGGGCAAAA +
Preference number: 3 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLGYTPL*LPPRAK
Trigger: TTTTGCCCTAGGAGGAAGCAATAATGGTGTATACCC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR TCA 72 bp GCCGGCTGGGACAAAAACGACTTTCGCTACAAAATATaGACCCTGTACAGACAGCATCAAGGGAGTGTGAGT +
Preference number: 3 (lower is better)
Translates to: AGWDKNDFRYKI*TLYRQHQGSVS
Trigger: ACTCACACTCCCTTGATGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR TCA 72 bp CCTAGGATGACACGACTTCCCATAAAACAACAGCGGTaGGTCCACCCTTTTCCCAGGACTATGGTACAGTTT +
Preference number: 3 (lower is better)
Translates to: PRMTRLPIKQQR*VHPFPRTMVQF
Trigger: AAACTGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGTCGTGTCATCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR-3UTR CAA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAACAGGAGCATCTACAGTaGCTGTGTTTCTTTCTTTTT +
Preference number: 3 (lower is better)
Translates to: ARQGTDGGEIILVPGWKEQEHLQ*LCFFLF
Trigger: AAAAAGAAAGAAACACAGCAACTGTAGATGCTCCTG...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR TCA 72 bp AGACAAGATCGAAGGATTATTGATCAACGGACCGAATaGCTGATCGTCAAAGTGGACAATACACAAGCAGCT +
Preference number: 3 (lower is better)
Translates to: RQDRRIIDQRTE*LIVKVDNTQAA
Trigger: AGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCATTCGGTCCGTTGATCAATAATCCTTCGATCTTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR TCA 72 bp AAGATCGAAGGATTATTGATCAACGGACCGAATGACTaGTCGTCAAAGTGGACAATACACAAGCAGCTTACA +
Preference number: 3 (lower is better)
Translates to: KIEGLLINGPND*SSKWTIHKQLT
Trigger: TGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCATTCGGTCCGTTGATCAATAATCCTTCGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp GCCCCAGCCCCGCCCACCATGTCGATGACCATCTTGCGTAGGCTCTGCCGCTGGGTGGCCTGGCCCCCTTaGCTCCTCCTCGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: APAPPTMSMTILRRLCRWVAWPP*LLLGWR
Trigger: CCGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCAC...CCAGCGGCAGAGCCTACGCAAGATGGTCATCGACATGGTGGGCGGGGCTGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp AGGCCCCACACCTGCTTGGGCCCAGGTAGAGACTCCCCAGGCGGCTGGAAGACTCGGCGCCTGGAGCTCTaGTCAGTGCCCGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: RPHTCLGPGRDSPGGWKTRRLEL*SVPGGA
Trigger: AGCGCCGCCGGGCACTGAGCAGAGCTCCAGGCGCCG...AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp AGGCCCCACACCTGCTTGGGCCCAGGTAGAGACTCCCCAGGCGGCTGGAAGACTACGAGGGCCAGGACATaGGGGTCGTGCGCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RPHTCLGPGRDSPGGWKTTRART*GSCAGR
Trigger: CCGGCCTGCGCACGACCCGCATGTCCTGGCCCTCGT...AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GGTGGCCTGGCCCCCTTGACTCCTCCTCGGGTGGCGGAGATGGGCTCTGCCGGAACTTCCAACGACTCCTaGGCCGGGGATGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GGLAPLTPPRVAEMGSAGTSNDS*AGDASQ
Trigger: CTGGGAGGCATCCCCGGCCCAGGAGTCGTTGGAAGT...TCCGGCAGAGCCCATCTCCGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp GGTGGCCTGGCCCCCTTGACTCCTCCTCGGGTGGCGGAGATGGGCTCTGCCGGAATCCGGAGCCACAGGTaGACTGCCTGTGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: GGLAPLTPPRVAEMGSAGIRSHR*TACGLC
Trigger: GCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGAT...TCCGGCAGAGCCCATCTCCGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CAA 72 bp CCCGCCCCAGCCCCGCCCACCATGTCGATGACCATCTaGCGTAGGCTCTGCCGCTGGCGCTTGCTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PAPAPPTMSMTI*RRLCRWRLLRF
Trigger: GAACCTCAGCAAGCGCCAGCGGCAGAGCCTACGCAAGATGGTCATCGACATGGTGGGCGGGGCTGGGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp GGGTGGCGGAGATGGGCTCTGCCGGATGGCGCTGTAGTACCAGTCCCGGTTGTCCTCCTGGGCCGGGGATaGCTCCCAGGCTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: GWRRWALPDGAVVPVPVVLLGRG*LPGYGC
Trigger: GCAACCATAGCCTGGGAGGCATCCCCGGCCCAGGAG...GACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp GGGTGGCGGAGATGGGCTCTGCCGGATGGCGCTGTAGTACCAGTCCCGGTTGTCTCCCAGCAGCAGCCCTaGTTACATGGCCCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GWRRWALPDGAVVPVPVVSQQQP*LHGPPA
Trigger: GGCTGGCGGGCCATGTAACCAGGGCTGCTGCTGGGA...GACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp GGGTGGCGGAGATGGGCTCTGCCGGATGGCGCTGTAGTACCAGTCCCGGTTGTCGGGGTTAACAACCACTaGGGAGGGGGTGCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GWRRWALPDGAVVPVPVVGVNNH*GGGAGQ
Trigger: CTGCCCGGCACCCCCTCCCCAGTGGTTGTTAACCCC...GACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp CCTCCCCAAAGCCCTCGACTCCTAGGCTTCCTTTCCCGCTCCGTCCCGCCCCAGGATCTCCTGGGCATCTaGGTGGACAAGGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PPQSPRLLGFLSRSVPPQDLLGI*VDKVRP
Trigger: TGGGCGGACCTTGTCCACCCAGATGCCCAGGAGATC...CTGGGGCGGGACGGAGCGGGAAAGGAAGCCTAGGAGTCGAGGGCTTTGGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp CCTCCCCAAAGCCCTCGACTCCTAGGCTTCCTTTCCCGCTCCGTCCCGCCCCAGATGGGCTCTGCCGGATaGCGCTGTAGTACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: PPQSPRLLGFLSRSVPPQMGSAG*RCSTSP
Trigger: GGGACTGGTACTACAGCGCCATCCGGCAGAGCCCAT...CTGGGGCGGGACGGAGCGGGAAAGGAAGCCTAGGAGTCGAGGGCTTTGGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR TCA 90 bp AGGCCCCACACCTGCTTGGGCCCAGGTAGAGACTCCCCAGGCGGCTGGAAGACTCCCCGTATCCTAAAGTaGACAGCTCCCCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RPHTCLGPGRDSPGGWKTPRILK*TAPPAP
Trigger: GGGAGCTGGGGGAGCTGTTCACTTTAGGATACGGGG...AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GGTGGCCTGGCCCCCTTGACTCCTCCTCGGGTGGCGGAGATGGGCTCTGCCGGAACTCCTGACAATCCCTaGGCAGTCAATGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GGLAPLTPPRVAEMGSAGTPDNP*AVNASW
Trigger: CCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGT...TCCGGCAGAGCCCATCTCCGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp GGGTGGCGGAGATGGGCTCTGCCGGATGGCGCTGTAGTACCAGTCCCGGTTGTCGAGCCACAGGTGCACTaGCTGTGGACTGTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GWRRWALPDGAVVPVPVVEPQVH*LWTVPA
Trigger: AGCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTC...GACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCAAGGAGGCCCCACACCTaGTTGGGCCCAGGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRARRPHT*LGPGRD
Trigger: GTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCTCCT...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCACGGCTGGGAGGGTCTTaGTCGCGGCGCTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRARLGGS*SRRLLF
Trigger: AAACAGCAAGCGCCGCGACCAAGACCCTCCCAGCCG...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ACTCCTCCTCGGGTGGCGGAGATGGGCTCTGCCGGATGGCGCTGTAGTACCAGTCGTAGGCTCTGCCGCTaGCGCTTGCTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TPPRVAEMGSAGWRCSTSRRLCR*RLLRFW
Trigger: CCAGAACCTCAGCAAGCGCCAGCGGCAGAGCCTACG...ACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACCCGAGGAGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp CCTCCCCAAAGCCCTCGACTCCTAGGCTTCCTTTCCCGCTCCGTCCCGCCCCAGGGAGGGTCATGTGCTTaGACATGTCCGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PPQSPRLLGFLSRSVPPQGGSCA*TCPWPA
Trigger: TGCTGGCCACGGACATGTCCAAGCACATGACCCTCC...CTGGGGCGGGACGGAGCGGGAAAGGAAGCCTAGGAGTCGAGGGCTTTGGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp GGGTGGCGGAGATGGGCTCTGCCGGATGGCGCTGTAGTACCAGTCCCGGTTGTCCCACCAAGGGCATCTTaGAGACTTAGCCCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GWRRWALPDGAVVPVPVVPPRAS*RLSPPG
Trigger: CCCAGGCGGGCTAAGTCTCCAAGATGCCCTTGGTGG...GACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp AGGCCCCACACCTGCTTGGGCCCAGGTAGAGACTCCCCAGGCGGCTGGAAGACTAGCCCTGCTTGGGGGTaGGTCTGTCTCTCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RPHTCLGPGRDSPGGWKTSPAWG*VCLSSH
Trigger: GTGACTGGAGAGACAGACCCACCCCCAAGCAGGGCT...AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCAGCGAGGCCATCTCGCTaGCAGAGCGATAGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRAARPSR*QSDRSA
Trigger: TGCAGACCTATCGCTCTGTCAGCGAGATGGCCTCGC...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCAATCTTGCGTAGGCTCTaGCGCTGGCGCTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRAILRRL*RWRLLR
Trigger: CCTCAGCAAGCGCCAGCGGCAGAGCCTACGCAAGAT...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCACCAGGGCAGAGGGGCTaGTGTGGCTTACAGCAACCA +
Preference number: 4 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRAPGQRG*CGLQQP
Trigger: TGGTTGCTGTAAGCCACAGCAGCCCCTCTGCCCTGG...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp AGGCCCCACACCTGCTTGGGCCCAGGTAGAGACTCCCCAGGCGGCTGGAAGACTCTTACAGAGGTCCTGTaGTCACCCTGGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RPHTCLGPGRDSPGGWKTLTEVL*SPWGEE
Trigger: CTCCTCTCCCCAGGGTGAGCACAGGACCTCTGTAAG...AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GCCACAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCTCCGTGGCCAGCACCTaGGGGCAAGGGGGCGTCACT +
Preference number: 4 (lower is better)
Translates to: ATGALPVDCACCVKYTASSVAST*GQGGVT
Trigger: AGTGACGCCCCCTTGCCCGCAGGTGCTGGCCACGGA...GGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGCCTTGCAGACAGGGGTaGGGCCGCCCAGCGGGGACC +
Preference number: 4 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGPCRQG*GRPAGT
Trigger: GGTCCCCGCTGGGCGGCCCCACCCCTGTCTGCAAGG...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CAACGACTCCTGGGCCGGGGATGCCTCCCAGGCTATGGTTGCATCCAGAGCTTCTCCTGGGCATCTGGGTaGACAAGGTCCGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QRLLGRGCLPGYGCIQSFSWASG*TRSAQV
Trigger: GACCTGGGCGGACCTTGTCCACCCAGATGCCCAGGA...GAAGCTCTGGATGCAACCATAGCCTGGGAGGCATCCCCGGCCCAGGAGTCGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp AGTTTTCACCAGGTAGAAGCCGCCCGCTCTGTCCAGGTTGAGGGTTCCTCTGGGCTCGGGTGGCGGAGATaGGCTCTGCCGGATGGCGCT +
Preference number: 4 (lower is better)
Translates to: SFHQVEAARSVQVEGSSGLGWRR*ALPDGA
Trigger: AGCGCCATCCGGCAGAGCCCATCTCCGCCACCCGAG...CCCAGAGGAACCCTCAACCTGGACAGAGCGGGCGGCTTCTACCTGGTGAAAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp ACTCCTGACAATCCCTGCGCAGTCAATGCCTCTTGGGCTGTGCACGGTATCTGGAGTGGGTGGAGGCGGTaGGGGGTCCGTGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: TPDNPCAVNASWAVHGIWSGWRR*GVRAHG
Trigger: CCCATGGGCACGGACCCCCCACCGCCTCCACCCACT...CCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp CAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCAGCTGCAGCCCTGGTTACATaGCCCGCCAGCCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: QVHCLWTVPAVSNTLPPAAALVT*PASPGP
Trigger: GGGCCCAGGGCTGGCGGGCCATGTAACCAGGGCTGC...AGCTGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR TCA 90 bp AATTCCTCCCGGGACGAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTGGACGCCGCTGGCGCTTGCTaGGGTTCTGGAAGATGTCGC +
Preference number: 4 (lower is better)
Translates to: NSSRDENSSGATGALPVDAAGAC*GSGRCR
Trigger: GCGACATCTTCCAGAACCTCAGCAAGCGCCAGCGGC...GTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR TCA 90 bp AGGCCCCACACCTGCTTGGGCCCAGGTAGAGACTCCCCAGGCGGCTGGAAGACTGAGGACAAGAGTCTTTaGGGCAGAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RPHTCLGPGRDSPGGWKTEDKSL*GRGGGG
Trigger: ACCACCTCCTCCTCTGCCTCAAAGACTCTTGTCCTC...AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp GTAGAAGCCGCCCGCTCTGTCCAGGTTGAGGGTTCCTCTGGGACTCAGACCCACCCGCTCTGTCCAGGTTaGGGGTTCCTCTGGGACTCA +
Preference number: 4 (lower is better)
Translates to: VEAARSVQVEGSSGTQTHPLCPG*GFLWDS
Trigger: TGAGTCCCAGAGGAACCCTCAACCTGGACAGAGCGG...GTGGGTCTGAGTCCCAGAGGAACCCTCAACCTGGACAGAGCGGGCGGCTTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR TCA 90 bp GCCCCAGCCCCGCCCACCATGTCGATGACCATCTTGCGTAGGCTCTGCCGCTGGACTGACCCGGGCCTCTaGAGTTTTCACCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: APAPPTMSMTILRRLCRWTDPGL*SFHQVE
Trigger: TTCTACCTGGTGAAAACTTCAGAGGCCCGGGTCAGT...CCAGCGGCAGAGCCTACGCAAGATGGTCATCGACATGGTGGGCGGGGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp CCTCCCCAAAGCCCTCGACTCCTAGGCTTCCTTTCCCGCTCCGTCCCGCCCCAGCCTGGTTTCCGGACCTaGTCATTTCTGACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: PPQSPRLLGFLSRSVPPQPGFRT*SFLTGV
Trigger: CACACCTGTCAGAAATGAGCAGGTCCGGAAACCAGG...CTGGGGCGGGACGGAGCGGGAAAGGAAGCCTAGGAGTCGAGGGCTTTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCAGGAGGGTCATGTGCTTaGACATGTCCGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRAGGSCA*TCPWPA
Trigger: TGCTGGCCACGGACATGTCCAAGCACATGACCCTCC...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CCTCCCCAAAGCCCTCGACTCCTAGGCTTCCTTTCCCGCTCCGTCCCGCCCCAGAGCGTCAGCTCAAACTaGAACTTGTCAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PPQSPRLLGFLSRSVPPQSVSSN*NLSGRG
Trigger: ACCCCTGCCTGACAAGTTCCAGTTTGAGCTGACGCT...CTGGGGCGGGACGGAGCGGGAAAGGAAGCCTAGGAGTCGAGGGCTTTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp GCCCCAGCCCCGCCCACCATGTCGATGACCATCTTGCGTAGGCTCTGCCGCTGGAACATCCTTTTGAACTaGTCCCACCAGCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: APAPPTMSMTILRRLCRWNILLN*SHQPTS
Trigger: GCTGGTGGGCTGGTGGGACCAGTTCAAAAGGATGTT...CCAGCGGCAGAGCCTACGCAAGATGGTCATCGACATGGTGGGCGGGGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp AGGCCCCACACCTGCTTGGGCCCAGGTAGAGACTCCCCAGGCGGCTGGAAGACTCAGCCCCGCCTAGAATaGCTATTCCTGACCACGTTC +
Preference number: 4 (lower is better)
Translates to: RPHTCLGPGRDSPGGWKTQPRLE*LFLTTF
Trigger: GAACGTGGTCAGGAATAGCCATTCTAGGCGGGGCTG...AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCAGCTGTGATCAGAGTGTaGAAGGTGGGGTCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRAAVIRV*KVGSGG
Trigger: TCCTCCGGACCCCACCTTCCACACTCTGATCACAGC...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCAAGGCTAGGGAGGAACTaGGGGCTACAGTACCGTGTG +
Preference number: 4 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRARLGRN*GLQYRV
Trigger: CACACGGTACTGTAGCCCCCAGTTCCTCCCTAGCCT...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp AGGCCCCACACCTGCTTGGGCCCAGGTAGAGACTCCCCAGGCGGCTGGAAGACTACTCCGATCGCCGGCTaGGACAAAAACGACTTTCGC +
Preference number: 4 (lower is better)
Translates to: RPHTCLGPGRDSPGGWKTTPIAG*DKNDFR
Trigger: GCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGT...AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp AGGCCCCACACCTGCTTGGGCCCAGGTAGAGACTCCCCAGGCGGCTGGAAGACTCAAATGGTGTTACGATaGGGTCTTCAGCGTGCGCCT +
Preference number: 4 (lower is better)
Translates to: RPHTCLGPGRDSPGGWKTQMVLR*GLQRAP
Trigger: AGGCGCACGCTGAAGACCTCATCGTAACACCATTTG...AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp AGGCCCCACACCTGCTTGGGCCCAGGTAGAGACTCCCCAGGCGGCTGGAAGACTGAATCTCCAGGTCCGTaGACACTGCATCTAGTGCAG +
Preference number: 4 (lower is better)
Translates to: RPHTCLGPGRDSPGGWKTESPGP*TLHLVQ
Trigger: CTGCACTAGATGCAGTGTTCACGGACCTGGAGATTC...AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp ACTCCTCCTCGGGTGGCGGAGATGGGCTCTGCCGGATGGCGCTGTAGTACCAGTAGCTTCCTCGACTCCTaGCAATCCCTGCGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: TPPRVAEMGSAGWRCSTSSFLDS*QSLRSQ
Trigger: TTGACTGCGCAGGGATTGTCAGGAGTCGAGGAAGCT...ACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACCCGAGGAGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGGCGAGTCCAGGGGGCTaGGGCCAGGAGATGGTGTCG +
Preference number: 4 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGASPGG*GQEMVS
Trigger: CGACACCATCTCCTGGCCGCAGCCCCCTGGACTCGC...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGTGGCCGCCCCGGCGTaGAGCACGAGTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLVAAPA*STSPGL
Trigger: GAGCCCAGGACTCGTGCTGCACGCCGGGGCGGCCAC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGCTGACAGCGTGGCCTTaGAGACAGGGGTGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGLTAWP*RQGWGR
Trigger: GCGGCCCCACCCCTGTCTGCAAGGCCACGCTGTCAG...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCAGGCTACAGTACCGTGTaGTCAGAATTGGGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRAGYSTV*SELGRG
Trigger: CCCCCTACCCAATTCTGAGCACACGGTACTGTAGCC...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp AGTTTTCACCAGGTAGAAGCCGCCCGCTCTGTCCAGGTTGAGGGTTCCTCTGGGGATCCACATCGTGGATaGCAGCCGCGAAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: SFHQVEAARSVQVEGSSGDPHRG*QPRRGR
Trigger: CCGCCCTCTTCGCGGCTGCCATCCACGATGTGGATC...CCCAGAGGAACCCTCAACCTGGACAGAGCGGGCGGCTTCTACCTGGTGAAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp GGATGCGGTCGGAGTAGTTATCTAGCAGGAGGACCCCTGAGCTGGTCACTTTCTTCAGGCAGGGGTGGGTaGCCTGGCCCCCTTGACTCC +
Preference number: 4 (lower is better)
Translates to: GCGRSSYLAGGPLSWSLSSGRGG*PGPLDS
Trigger: GGAGTCAAGGGGGCCAGGCCACCCACCCCTGCCTGA...AGAAAGTGACCAGCTCAGGGGTCCTCCTGCTAGATAACTACTCCGACCGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp GGTGGCCTGGCCCCCTTGACTCCTCCTCGGGTGGCGGAGATGGGCTCTGCCGGATGCCCAGGAATGTTGTaGAAATGTACTCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: GGLAPLTPPRVAEMGSAGCPGML*KCTLRP
Trigger: AGGTCTCAGAGTACATTTCCACAACATTCCTGGGCA...TCCGGCAGAGCCCATCTCCGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589073.1
3UTR CAA 72 bp ACGACTCCTGGGCCGGGGATGCCTCCCAGGCTATGGTaGCATCCAGAGCTTCCTCGACTCCTGACAATCCCT +
Preference number: 4 (lower is better)
Translates to: TTPGPGMPPRLW*HPELPRLLTIP
Trigger: AGGGATTGTCAGGAGTCGAGGAAGCTCTGGATGCAACCATAGCCTGGGAGGCATCCCCGGCCCAGGAGTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR TCA 90 bp AGGCCCCACACCTGCTTGGGCCCAGGTAGAGACTCCCCAGGCGGCTGGAAGACTTGTGGAAATGTACTCTaGGACCTGGTTTCCGGACCT +
Preference number: 4 (lower is better)
Translates to: RPHTCLGPGRDSPGGWKTCGNVL*DLVSGP
Trigger: AGGTCCGGAAACCAGGTCTCAGAGTACATTTCCACA...AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp CAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCAGCTCCCACGGCCAGGTGGTaGTTCTCGAGCACCGACTCA +
Preference number: 4 (lower is better)
Translates to: QVHCLWTVPAVSNTLPPAPTARW*FSSTDS
Trigger: TGAGTCGGTGCTCGAGAATCACCACCTGGCCGTGGG...AGCTGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR TCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGTGGCCTGGCCCCCTTaGCTCCTCCTCGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKEVAWPP*LLLGWR
Trigger: CCGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCAC...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp AATTCCTCCCGGGACGAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTGGACCGCCCACCATGTCGATaGCCATCTTGCGTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: NSSRDENSSGATGALPVDRPPCR*PSCVGS
Trigger: AGAGCCTACGCAAGATGGTCATCGACATGGTGGGCG...GTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCACCTGGTTTCCGGACCTaGTCATTTCTGACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRAPGFRT*SFLTGV
Trigger: CACACCTGTCAGAAATGAGCAGGTCCGGAAACCAGG...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCCCCCGGGCCGGGCTCTaGAGCTTCCTTTCGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSAPRAGL*SFLSAP
Trigger: AGGCGCCGAAAGGAAGCTGCAGAGCCCGGCCCGGGG...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAAGGACATGCGGGTCGTaGGCAGGCCGGGCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKERTCGS*AGRAGR
Trigger: GCGACCGGCCCGGCCTGCGCACGACCCGCATGTCCT...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CCTCCCCAAAGCCCTCGACTCCTAGGCTTCCTTTCCCGCTCCGTCCCGCCCCAGATGTACTCTGAGACCTaGTTTCCGGACCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: PPQSPRLLGFLSRSVPPQMYSET*FPDLLI
Trigger: AATGAGCAGGTCCGGAAACCAGGTCTCAGAGTACAT...CTGGGGCGGGACGGAGCGGGAAAGGAAGCCTAGGAGTCGAGGGCTTTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp GTAGAAGCCGCCCGCTCTGTCCAGGTTGAGGGTTCCTCTGGGACTCAGACCCACGTGTCCAAGATCTCCTaGGCATCTGGGTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: VEAARSVQVEGSSGTQTHVSKIS*ASGWTR
Trigger: CCTTGTCCACCCAGATGCCCAGGAGATCTTGGACAC...GTGGGTCTGAGTCCCAGAGGAACCCTCAACCTGGACAGAGCGGGCGGCTTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGACTCGGGTGGCGGAGATaGGCTCTGCCGGATGGCGCT +
Preference number: 4 (lower is better)
Translates to: ATATPLPVAVGIIKAETRLGWRR*ALPDGA
Trigger: AGCGCCATCCGGCAGAGCCCATCTCCGCCACCCGAG...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CCTCCCCAAAGCCCTCGACTCCTAGGCTTCCTTTCCCGCTCCGTCCCGCCCCAGGCTGTGCACGGTATCTaGGCCATTGATATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PPQSPRLLGFLSRSVPPQAVHGI*AIDISS
Trigger: GGAAGAAATATCAATGGCCCAGATACCGTGCACAGC...CTGGGGCGGGACGGAGCGGGAAAGGAAGCCTAGGAGTCGAGGGCTTTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR TCA 90 bp ACTCCTCCTCGGGTGGCGGAGATGGGCTCTGCCGGATGGCGCTGTAGTACCAGTTCAATAAAACCCACCTaGGACTTCTCCACGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TPPRVAEMGSAGWRCSTSSIKPT*DFSTEA
Trigger: TGCCTCCGTGGAGAAGTCTCAGGTGGGTTTTATTGA...ACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACCCGAGGAGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR TCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCCCGGGGCCCGGGCAGTaGCAGAGACAGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSAPGPGQ*QRQAPF
Trigger: GAAAGGAGCCTGTCTCTGTCACTGCCCGGGCCCCGG...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp AGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCAGCTCTCCCTGCGCAGTCAATaGCTCTTGGGCTGTGCACGG +
Preference number: 4 (lower is better)
Translates to: RCTACGLCLLCQIHCLQLSLRSQ*LLGCAR
Trigger: CCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGA...GAGCTGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGCTGCCGCCACAGGTaGTGCGGGGGAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKEGCRHR*CGGGFR
Trigger: CCTGAAGCCTCCCCCGCAGCACCTGTGGCGGCAGCC...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGAGTGCAGCACGAGTCCTaGGCTCGCCTGCGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ATATPLPVAVGIIKAETRVQHES*ARLRVQ
Trigger: CTGGACTCGCAGGCGAGCCCAGGACTCGTGCTGCAC...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCTCAGGCAGGGGTGGGTaGCCTGGCCCCCTTGACTCC +
Preference number: 4 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSASGRGG*PGPLDS
Trigger: GGAGTCAAGGGGGCCAGGCCACCCACCCCTGCCTGA...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCAGCTCACAGAGGCTGGGCTTaGGGAGTCCCGGGGTTAACA +
Preference number: 4 (lower is better)
Translates to: QVHCLWTVPAVSNTLPPAHRGWA*GVPGLT
Trigger: TGTTAACCCCGGGACTCCCCAAGCCCAGCCTCTGTG...AGCTGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR TCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGGGAGAAGGGGGCTTTaGAGAGCCAGGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLGRRGL*RARAEG
Trigger: CCCCTCTGCCCTGGCTCTTCAAAGCCCCCTTCTCCC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp AGGCCCCACACCTGCTTGGGCCCAGGTAGAGACTCCCCAGGCGGCTGGAAGACTAACGGACCGAATGACTaGTCGTCAAAGTGGACAATA +
Preference number: 4 (lower is better)
Translates to: RPHTCLGPGRDSPGGWKTNGPND*SSKWTI
Trigger: TATTGTCCACTTTGACGATCAGTCATTCGGTCCGTT...AGTCTTCCAGCCGCCTGGGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGAGTACGTGGGTGGACTaGAGCACGTCAGCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGSTWVD*STSAAC
Trigger: GCACGCAGCTGACGTGCTGCAGTCCACCCACGTACT...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp AGTTTTCACCAGGTAGAAGCCGCCCGCTCTGTCCAGGTTGAGGGTTCCTCTGGGATGCCTCTTGGGCTGTaGACGGTATCTGGGCCATTG +
Preference number: 4 (lower is better)
Translates to: SFHQVEAARSVQVEGSSGMPLGL*TVSGPL
Trigger: CAATGGCCCAGATACCGTGCACAGCCCAAGAGGCAT...CCCAGAGGAACCCTCAACCTGGACAGAGCGGGCGGCTTCTACCTGGTGAAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp GCCACAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCCTCCCAGGCTATGGTTaGATCCAGAGCTTCCTCGAC +
Preference number: 4 (lower is better)
Translates to: ATGALPVDCACCVKYTASLPGYG*IQSFLD
Trigger: GTCGAGGAAGCTCTGGATGCAACCATAGCCTGGGAG...GGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp AGTTTTCACCAGGTAGAAGCCGCCCGCTCTGTCCAGGTTGAGGGTTCCTCTGGGCTGTGTCAAATACACTaGCTCCAGCTCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SFHQVEAARSVQVEGSSGLCQIH*LQLGLQ
Trigger: CTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACAG...CCCAGAGGAACCCTCAACCTGGACAGAGCGGGCGGCTTCTACCTGGTGAAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGACTGCCTCATCCAAGGTaGAGGCGGCCACTGCAACCC +
Preference number: 4 (lower is better)
Translates to: ATATPLPVAVGIIKAETRLPHPR*RRPLQP
Trigger: GGGTTGCAGTGGCCGCCTGCACCTTGGATGAGGCAG...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp CAACGACTCCTGGGCCGGGGATGCCTCCCAGGCTATGGTTGCATCCAGAGCTTCCAGGTCCGTGAACACTaGCCAGGAATGTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: QRLLGRGCLPGYGCIQSFQVREH*PGMLWK
Trigger: TTTCCACAACATTCCTGGGCAGTGTTCACGGACCTG...GAAGCTCTGGATGCAACCATAGCCTGGGAGGCATCCCCGGCCCAGGAGTCGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCAATGTACTCTGAGACCTaGTTTCCGGACCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRAMYSET*FPDLLI
Trigger: AATGAGCAGGTCCGGAAACCAGGTCTCAGAGTACAT...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGCCCTCTTGGCAGCCTaGTGCTCTCGTTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLALLAA*CSRWAS
Trigger: GGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCACGGTCGGGGGTTCCATaGCGCCGGCCCCCACTTGCG +
Preference number: 4 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTARSGVP*RRPPLA
Trigger: CGCAAGTGGGGGCCGGCGCCATGGAACCCCCGACCG...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGCTGCTGGATACGGATaGGGGTCCGAGGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKEAAGYG*GSEAAA
Trigger: GGCGGCAGCCTCGGACCCCCATCCGTATCCAGCAGC...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTGGCCGGGCCGGTCGCTaGTGTCCATGGCATCGGCGC +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAGRAGR*CPWHRR
Trigger: GCGCCGATGCCATGGACACCAGCGACCGGCCCGGCC...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCACCTTGCCTGTGGCCGTaGGAATTATTAAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRAPCLWP*ELLRQK
Trigger: TTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGG...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGAGAGAGGAGCCCTGCTTaGGGGTGGGTCTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ATATPLPVAVGIIKAETRERSPA*GWVCLS
Trigger: GGAGAGACAGACCCACCCCCAAGCAGGGCTCCTCTC...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
3UTR CAA 72 bp GCCTCATCCAAGGTGCAGGCGGCCACTGCAACCCCCTaGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: ASSKVQAATATP*PVAVGIIKAET
Trigger: TGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGCCGCCTGCACCTTGGATGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp AATTCCTCCCGGGACGAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTGGACTTTCTGACAGGTGTGTaGGCTCACGGTTCAACATCC +
Preference number: 4 (lower is better)
Translates to: NSSRDENSSGATGALPVDFLTGV*AHGSTS
Trigger: GGATGTTGAACCGTGAGCTCACACACCTGTCAGAAA...GTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR TCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTACCCACGGCCAGGTGGTaGTTCTCGAGCACCGACTCA +
Preference number: 4 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLPTARW*FSSTDS
Trigger: TGAGTCGGTGCTCGAGAATCACCACCTGGCCGTGGG...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGCCGAGGCTGGCGGTGTaGACGCTCCCTTCCATACCA +
Preference number: 4 (lower is better)
Translates to: EARQGTDGGEIILVPGWKPRLAV*TLPSIP
Trigger: TGGTATGGAAGGGAGCGTTCACACCGCCAGCCTCGG...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp AGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGGGGGGCAGGCGATGAATaGGGTCGGTCCAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RQGTDGGEIILVPGWKEGGAGDE*GRSSCR
Trigger: TCTGCAGCTGGACCGACCTCATTCATCGCCTGCCCC...CCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGTAGGGGGCAGGCGATaGATGAGGTCGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLVGGRR*MRSVQL
Trigger: CAGCTGGACCGACCTCATTCATCGCCTGCCCCCTAC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp GCCACAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCGAATCTCCAGGTCCGTaGACACTGCCCAGGAATGTT +
Preference number: 4 (lower is better)
Translates to: ATGALPVDCACCVKYTASESPGP*TLPRNV
Trigger: AACATTCCTGGGCAGTGTTCACGGACCTGGAGATTC...GGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGATGGGGGTCCGAGGCTaGCGCCACAGGTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRMGVRG*RHRCCG
Trigger: CCCGCAGCACCTGTGGCGGCAGCCTCGGACCCCCAT...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCGATCCACATCGTGGATaGCAGCCGCGAAGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSADPHRG*QPRRGR
Trigger: CCGCCCTCTTCGCGGCTGCCATCCACGATGTGGATC...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGACTTCCAACGACTCCTaGGCCGGGGATGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: EARQGTDGGEIILVPGWKTSNDS*AGDASQ
Trigger: CTGGGAGGCATCCCCGGCCCAGGAGTCGTTGGAAGT...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GGATGCGGTCGGAGTAGTTATCTAGCAGGAGGACCCCTGAGCTGGTCACTTTCTCAGGTGCACTGCCTGTaGACTGTGCCTGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: GCGRSSYLAGGPLSWSLSQVHCL*TVPAVS
Trigger: TGACACAGCAGGCACAGTCCACAGGCAGTGCACCTG...AGAAAGTGACCAGCTCAGGGGTCCTCCTGCTAGATAACTACTCCGACCGCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGGCCTGGTGCTCTCGTTaGGCCTCCACCTCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRAWCSR*ASTSAA
Trigger: GGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGC...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAACCCGCCACCAGGAGCTaGGAGTGCGGATGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKEPATRS*ECGCVL
Trigger: GAGGACACATCCGCACTCCCAGCTCCTGGTGGCGGG...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGGGTTCTGGGCGCCTaGCCCTGCCTCATCCAAGGT +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKEGVLGA*PCLIQG
Trigger: ACCTTGGATGAGGCAGGGCCAGGCGCCCAGAACCCC...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGATCCCGGGCCAACTGCTaGCACGTTTCTTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: ATATPLPVAVGIIKAETRSRANC*HVSSDS
Trigger: GCTGTCAGAAGAAACGTGTCAGCAGTTGGCCCGGGA...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp CAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCAGCTACTCATCGTTGTACATaGGCGCCAGCTCCGAATTGG +
Preference number: 4 (lower is better)
Translates to: QVHCLWTVPAVSNTLPPATHRCT*APAPNW
Trigger: CCAATTCGGAGCTGGCGCTCATGTACAACGATGAGT...AGCTGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR TCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGCCAGCACCATGTCGATaGCCATCTTGCGTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGPAPCR*PSCVGS
Trigger: AGAGCCTACGCAAGATGGTCATCGACATGGTGCTGG...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp AATTCCTCCCGGGACGAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTGGACCGGTATCTGGGCCATTaGTATTTCTTCCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NSSRDENSSGATGALPVDRYLGH*YFFLLF
Trigger: GAAGAGGAGGAAGAAATATCAATGGCCCAGATACCG...GTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGATCAGGAGTGAGAAGTTaGTACGGACGCTCCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ATATPLPVAVGIIKAETRSGVRS*YGRSGG
Trigger: GCCTCCGGAGCGTCCGTAGCAACTTCTCACTCCTGA...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp TGCGCAGTCAATGCCTCTTGGGCTGTGCACGGTATCTGGGCCATTGATATTTCTATCTTGCGTAGGCTCTaGCGCTGGCGCTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CAVNASWAVHGIWAIDISILRRL*RWRLLR
Trigger: CCTCAGCAAGCGCCAGCGGCAGAGCCTACGCAAGAT...AGAAATATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACACTCCTGGGCCGGGGATaGCTCCCAGGCTATGGTTGC +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTLLGRG*LPGYGC
Trigger: GCAACCATAGCCTGGGAGGCATCCCCGGCCCAGGAG...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GGATGCGGTCGGAGTAGTTATCTAGCAGGAGGACCCCTGAGCTGGTCACTTTCTCTCGGCCTCCAGGGATaGTTCCTGTGCCATAACTTC +
Preference number: 4 (lower is better)
Translates to: GCGRSSYLAGGPLSWSLSLGLQG*FLCHNF
Trigger: GAAGTTATGGCACAGGAAGCATCCCTGGAGGCCGAG...AGAAAGTGACCAGCTCAGGGGTCCTCCTGCTAGATAACTACTCCGACCGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGAGCCACAGGTGCACTaGCTGTGGACTGTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLEPQVH*LWTVPA
Trigger: AGCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp AGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGGATCCGGAGCCACAGGTaGACTGCCTGTGGACTGTGC +
Preference number: 4 (lower is better)
Translates to: RQGTDGGEIILVPGWKEGIRSHR*TACGLC
Trigger: GCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGAT...CCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAACTCTTGGCAGCCTGGTaGTCTCGTTGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKELLAAW*SRWAST
Trigger: GGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAG...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAATCCCTGCGCAGGCACTaGAAGCCCTCTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKESLRRH*KPSWQP
Trigger: AGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGA...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTACTCCCCAAATGTCCCTaGGCAGGCACTGCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLLPKCP*AGTASP
Trigger: AGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAG...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCATACACCCCGCTCAGCTaGGCGCAAGCCAGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTAYTPLS*AQASEP
Trigger: GGGCTCGCTGGCTTGCGCGCAGCTGAGCGGGGTGTA...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTGGTGCAGGCGGCCACTaGAACCCCCTTGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAGAGGH*NPLACG
Trigger: GCCACAGGCAAGGGGGTTGCAGTGGCCGCCTGCACC...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGATCTGTCTGCCGTATTaGTCAGGGACTAGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGICLPY*SGTSWG
Trigger: CCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGAT...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp AGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGGTCAAGGGAGTGTGAGTaGGGGGTTACCTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RQGTDGGEIILVPGWKEGSRECE*GVTSPW
Trigger: CCAGGGGGAGGTAACCCCGCACTCACACTCCCTTGA...CCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGTGGCCAGCAGTACGTaGGTGGACTGCAGCACGTCA +
Preference number: 4 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLVASST*VDCSTS
Trigger: TGACGTGCTGCAGTCCACCCACGTACTGCTGGCCAC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp AGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGGGATCTCCTGGGCATCTaGGTGGACAAGGTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: RQGTDGGEIILVPGWKEGDLLGI*VDKVRP
Trigger: TGGGCGGACCTTGTCCACCCAGATGCCCAGGAGATC...CCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GGATGCGGTCGGAGTAGTTATCTAGCAGGAGGACCCCTGAGCTGGTCACTTTCTGCAGTCAATGCCTCTTaGGCTGTGCACGGTATCTGG +
Preference number: 4 (lower is better)
Translates to: GCGRSSYLAGGPLSWSLSAVNAS*AVHGIW
Trigger: CCAGATACCGTGCACAGCCCAAGAGGCATTGACTGC...AGAAAGTGACCAGCTCAGGGGTCCTCCTGCTAGATAACTACTCCGACCGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGGCAGAGGGGCTGCTGTaGCTTACAGCAACCACGAAT +
Preference number: 4 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGAEGLL*LTATTN
Trigger: ATTCGTGGTTGCTGTAAGCCACAGCAGCCCCTCTGC...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAACTTCCTTTCGGCGCCTaGAGCTCTGCTCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKELPFGA*SSAQCP
Trigger: CGGGCACTGAGCAGAGCTCCAGGCGCCGAAAGGAAG...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGACTGAGCCTGGAACTTaGGGGGCAGTGGGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: EARQGTDGGEIILVPGWKTEPGT*GAVGEG
Trigger: ACCTTCCCCCACTGCCCCCCAAGTTCCAGGCTCAGT...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGACTCCCCAGGCGGCTaGAAGACTGAGCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLDSPGG*KTEPGT
Trigger: AGTTCCAGGCTCAGTCTTCCAGCCGCCTGGGGAGTC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGCCAGGATGGGGGTTCTaGGCGCCTGGCCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRPGWGF*APGPAS
Trigger: TGAGGCAGGGCCAGGCGCCCAGAACCCCCATCCTGG...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGTCAGAGTGTGGAAGGTaGGGTCCGGAGGACCCTGGA +
Preference number: 4 (lower is better)
Translates to: EARQGTDGGEIILVPGWKSECGR*GPEDPG
Trigger: TCCAGGGTCCTCCGGACCCCACCTTCCACACTCTGA...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTCGTGCGCCTCGCTGGTaGCCGATGAGTTCCGGGACA +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCARAPRW*PMSSGT
Trigger: TGTCCCGGAACTCATCGGTCACCAGCGAGGCGCACG...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACAGCCGCTGGCGCTTGCTaGGGTTCTGGAAGATGTCGC +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTAAGAC*GSGRCR
Trigger: GCGACATCTTCCAGAACCTCAGCAAGCGCCAGCGGC...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGCTTGGTCGCGGCGCTTaGTGTTTTTCTCGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGLGRGA*CFSRSF
Trigger: GAAGGAACGAGAAAAACAGCAAGCGCCGCGACCAAG...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGACTGCAGCACGTCAGCTaGGTGCAGGCTGTTATGGTA +
Preference number: 4 (lower is better)
Translates to: ATATPLPVAVGIIKAETRLQHVS*VQAVMV
Trigger: TACCATAACAGCCTGCACGCAGCTGACGTGCTGCAG...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GGATGCGGTCGGAGTAGTTATCTAGCAGGAGGACCCCTGAGCTGGTCACTTTCTTCCGGAGGACCTGGATaGGGTCGGAGTAGTTATCTA +
Preference number: 4 (lower is better)
Translates to: GCGRSSYLAGGPLSWSLSSGGPG*GRSSYL
Trigger: TAGATAACTACTCCGACCGCATCCAGGTCCTCCGGA...AGAAAGTGACCAGCTCAGGGGTCCTCCTGCTAGATAACTACTCCGACCGCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGACTCCTGACAATCCCTaGGCAGTCAATGCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGTPDNP*AVNASW
Trigger: CCAAGAGGCATTGACTGCGCAGGGATTGTCAGGAGT...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAATGTCGGCCCATTCTCTaGCTCGAAGCGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKECRPIL*LEAPAA
Trigger: AGCAGCAGGCGCTTCGAGGCAGAGAATGGGCCGACA...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACAGGACGCTCCGGAGGCTaGCCAGCACCTGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTGRSGG*PAPEQM
Trigger: CATTTGCTCAGGTGCTGGCCAGCCTCCGGAGCGTCC...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACATCCTGGGCATCTGGGTaGACAAGGTCCGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTSWASG*TRSAQV
Trigger: GACCTGGGCGGACCTTGTCCACCCAGATGCCCAGGA...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp AGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGGCAGGTGCACTGCCTGTaGACTGTGCCTGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: RQGTDGGEIILVPGWKEGQVHCL*TVPAVS
Trigger: TGACACAGCAGGCACAGTCCACAGGCAGTGCACCTG...CCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTCCGGTGCCAGTGCCATaGAAGGACGAGGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAPVPVP*KDEGQD
Trigger: GTCCTGGCCCTCGTCCTTCCATGGCACTGGCACCGG...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTGGCCCCACACCTGCTTaGGCCCAGGTAGAGACTCCC +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAGPTPA*AQVETP
Trigger: GGGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCC...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCATCCCAGGCCCGAGGCTaGCGGTGTGAACGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTASQARG*RCERSL
Trigger: AAGGGAGCGTTCACACCGCCAGCCTCGGGCCTGGGA...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCAGCTTCCTCGACTCCTaGCAATCCCTGCGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSASFLDS*QSLRSQ
Trigger: TTGACTGCGCAGGGATTGTCAGGAGTCGAGGAAGCT...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCAGCCCGGGGCATGCTCTaGAACAGACAGGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTAARGML*NRQGPP
Trigger: TGGAGGACCCTGTCTGTTTCAGAGCATGCCCCGGGC...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCATGCCTCTTGGGCTGTaGACGGTATCTGGGCCATTG +
Preference number: 4 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSAMPLGL*TVSGPL
Trigger: CAATGGCCCAGATACCGTGCACAGCCCAAGAGGCAT...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GGATGCGGTCGGAGTAGTTATCTAGCAGGAGGACCCCTGAGCTGGTCACTTTCTCAGGGATGCTTCCTGTaGCATAACTTCCAACGACTC +
Preference number: 4 (lower is better)
Translates to: GCGRSSYLAGGPLSWSLSQGCFL*HNFQRL
Trigger: GAGTCGTTGGAAGTTATGGCACAGGAAGCATCCCTG...AGAAAGTGACCAGCTCAGGGGTCCTCCTGCTAGATAACTACTCCGACCGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR GCA 90 bp AGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGGGGTGGAAGGAAGGGCTaGCCAGGAATGAGAATGAGG +
Preference number: 4 (lower is better)
Translates to: RQGTDGGEIILVPGWKEGGGRKG*PGMRMR
Trigger: CCTCATTCTCATTCCTGGGCAGCCCTTCCTTCCACC...CCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTGCTGCGGCCAGGAGATaGTGTCGGCCCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAAAARR*CRPILC
Trigger: GCAGAGAATGGGCCGACACCATCTCCTGGCCGCAGC...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGGGACCGCTTGTTACTaGGAACGGGCACATTGGTCA +
Preference number: 4 (lower is better)
Translates to: EARQGTDGGEIILVPGWKGTACY*ERAHWS
Trigger: TGACCAATGTGCCCGTTCCCAGTAACAAGCGGTCCC...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACACCAGCAGTACGTGGGTaGACTGCAGCACGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTPAVRG*TAARQL
Trigger: CAGCTGACGTGCTGCAGTCCACCCACGTACTGCTGG...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCACGTAGGCTCTGCCGCTaGCGCTTGCTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTARRLCR*RLLRFW
Trigger: CCAGAACCTCAGCAAGCGCCAGCGGCAGAGCCTACG...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGAAGCGTCAGCTCAAACTaGAACTTGTCAGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: ATATPLPVAVGIIKAETRSVSSN*NLSGRG
Trigger: ACCCCTGCCTGACAAGTTCCAGTTTGAGCTGACGCT...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCGCAGTCAATGCCTCTTaGGCTGTGCACGGTATCTGG +
Preference number: 4 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSAAVNAS*AVHGIW
Trigger: CCAGATACCGTGCACAGCCCAAGAGGCATTGACTGC...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAACACTGCAAGCCCTCTTaGCAGCCTGGTGCTCTCGTT +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKEHCKPS*QPGALV
Trigger: AACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTG...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAACAGGGACAGAGGTCTaGGGATCAGGTAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKETGTEV*GSGRVS
Trigger: GGAGACCCTACCTGATCCCCAGACCTCTGTCCCTGT...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTGGTCGCTGGTGTCCATaGCATCGGCGCGCTCTATGG +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAGRWCP*HRRALW
Trigger: CCATAGAGCGCGCCGATGCCATGGACACCAGCGACC...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAAAAGGGGATGGAGAGTaGAGGAGGTCTAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKEKGDGE*RRSRAL
Trigger: GAGGGCCCTAGACCTCCTCCACTCTCCATCCCCTTT...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACACTCGCTGGTGACCGATaGGTTCCGGGACATGGTCTT +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTLAGDR*VPGHGL
Trigger: AAGACCATGTCCCGGAACTCATCGGTCACCAGCGAG...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACACATGATGCAGGTGAGTaGGCGGCCTCCAGCGTAATC +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTHDAGE*AASSVI
Trigger: GATTACGCTGGAGGCCGCTCACTCACCTGCATCATG...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGAGCATCAAGGGAGTGTaGGTGCGGGGTTACCTCCCC +
Preference number: 4 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRSIKGV*VRGYLP
Trigger: GGGGAGGTAACCCCGCACTCACACTCCCTTGATGCT...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTTCCCTGCGCAGTCAATaGCTCTTGGGCTGTGCACGG +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCASLRSQ*LLGCAR
Trigger: CCGTGCACAGCCCAAGAGGCATTGACTGCGCAGGGA...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACACCACTGCAACCCCCTTaGCTGTGGCCGTGGGAATTA +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTPLQPP*LWPWEL
Trigger: TAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGG...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGTGGGAACGGGCACATTaGTCAGGAGTGAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: EARQGTDGGEIILVPGWKWERAH*SGVRSC
Trigger: GCAACTTCTCACTCCTGACCAATGTGCCCGTTCCCA...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGAGCAGGTCCCGCTCCTaGAATATCATGTACATGATG +
Preference number: 4 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGSRSRS*NIMYMM
Trigger: CATCATGTACATGATATTCCAGGAGCGGGACCTGCT...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGTGTCCAAGATCTCCTaGGCATCTGGGTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKEVSKIS*ASGWTR
Trigger: CCTTGTCCACCCAGATGCCCAGGAGATCTTGGACAC...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTATGGGCTCTGCCGGATaGCGCTGTAGTACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAMGSAG*RCSTSP
Trigger: GGGACTGGTACTACAGCGCCATCCGGCAGAGCCCAT...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp AGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGGGGAGGGATTTGGAAGTaGAAAGCGGGAACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RQGTDGGEIILVPGWKEGGGIWK*KAGTRN
Trigger: GTTCCTGGTTCCCGCTTTCCACTTCCAAATCCCTCC...CCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp TGCGCAGTCAATGCCTCTTGGGCTGTGCACGGTATCTGGGCCATTGATATTTCTTGTGGAAATGTACTCTaGGACCTGGTTTCCGGACCT +
Preference number: 4 (lower is better)
Translates to: CAVNASWAVHGIWAIDISCGNVL*DLVSGP
Trigger: AGGTCCGGAAACCAGGTCTCAGAGTACATTTCCACA...AGAAATATCAATGGCCCAGATACCGTGCACAGCCCAAGAGGCATTGACTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR TCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGGCTCCCCCAGCTCCCTaGCTTTCTAGTCAGTATCGC +
Preference number: 4 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRAPPAP*LSSQYR
Trigger: GCGATACTGACTAGAAAGTCAGGGAGCTGGGGGAGC...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCGATCAACGGACCGAATaGCTGATCGTCAAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSADQRTE*LIVKVD
Trigger: GTCCACTTTGACGATCAGTCATTCGGTCCGTTGATC...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGCAGGGATGCTTCCTGTaGCATAACTTCCAACGACTC +
Preference number: 4 (lower is better)
Translates to: EARQGTDGGEIILVPGWKQGCFL*HNFQRL
Trigger: GAGTCGTTGGAAGTTATGGCACAGGAAGCATCCCTG...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGGTCTTGCATCTGTCTaGCGTATTGCTCAGGGACTA +
Preference number: 4 (lower is better)
Translates to: EARQGTDGGEIILVPGWKGLASV*RIAQGL
Trigger: TAGTCCCTGAGCAATACGGCAGACAGATGCAAGACC...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACAAGCGATAGGTCTGCATaGTCTCCAGCTGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTSDRSA*SPAAPD
Trigger: GTCTGGAGCAGCTGGAGACCATGCAGACCTATCGCT...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTACTCGTTCCTTCATCGTaGGTGATGGGATCTCCACTT +
Preference number: 4 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLLVPSS*VMGSPL
Trigger: AAGTGGAGATCCCATCACCCACGATGAAGGAACGAG...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGATGGCTTGGAGAAAAATaGTCTTGCATCTGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: ATATPLPVAVGIIKAETRWLGEK*SCICLP
Trigger: CGGCAGACAGATGCAAGACCATTTTTCTCCAAGCCA...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTAGGCTGGCCAGCACCTaGGCAAATGGTGTTACGATG +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCARLAST*ANGVTM
Trigger: CATCGTAACACCATTTGCTCAGGTGCTGGCCAGCCT...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGTTCCTTCATCGTGGGTaGTGGGATCTCCACTTCATT +
Preference number: 4 (lower is better)
Translates to: EARQGTDGGEIILVPGWKFLHRG*WDLHFI
Trigger: AATGAAGTGGAGATCCCATCACCCACGATGAAGGAA...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGCTCCCAGGCTATGGTTaGATCCAGAGCTTCCTCGAC +
Preference number: 4 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRLPGYG*IQSFLD
Trigger: GTCGAGGAAGCTCTGGATGCAACCATAGCCTGGGAG...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTCTCGGCCTCCAGGGATaGTTCCTGTGCCATAACTTC +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCALGLQG*FLCHNF
Trigger: GAAGTTATGGCACAGGAAGCATCCCTGGAGGCCGAG...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTCTGTGTCAAATACACTaGCTCCAGCTCGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCALCQIH*LQLGLQ
Trigger: CTGGAGGCCGAGCTGGAGGCAGTGTATTTGACACAG...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGCAGCACCTGAGCAAATaGTGTTACGATGAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: EARQGTDGGEIILVPGWKQHLSK*CYDEVF
Trigger: GAAGACCTCATCGTAACACCATTTGCTCAGGTGCTG...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGTTTCTTCTGACAGCGTaGCCTTGCAGACAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRFLLTA*PCRQGW
Trigger: CCACCCCTGTCTGCAAGGCCACGCTGTCAGAAGAAA...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGCTGTGCACGGTATCTaGGCCATTGATATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLAVHGI*AIDISS
Trigger: GGAAGAAATATCAATGGCCCAGATACCGTGCACAGC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGGTGAGGGGAGGGATTTaGAAGTGGAAAGCGGGAACC +
Preference number: 4 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRVRGGI*KWKAGT
Trigger: GGTTCCCGCTTTCCACTTCCAAATCCCTCCCCTCAC...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTCACATTGGTCAGGAGTaGGAAGTTGCTACGGACGCT +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAHIGQE*EVATDA
Trigger: AGCGTCCGTAGCAACTTCTCACTCCTGACCAATGTG...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCACTTTTTCAACCCTGTaGTTTGGGACATGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSATFSTL*FGTWAV
Trigger: TACAGCCCATGTCCCAAATCACAGGGTTGAAAAAGT...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTGCCAGGAGCTCTTCTTaGTCGGTCTTCACCCCAAAT +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAARSSS*SVFTPN
Trigger: ATTTGGGGTGAAGACCGATCAAGAAGAGCTCCTGGC...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCAACTCATCGTTGTACATaGGCGCCAGCTCCGAATTGG +
Preference number: 4 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTATHRCT*APAPNW
Trigger: CCAATTCGGAGCTGGCGCTCATGTACAACGATGAGT...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACATCAATAAAACCCACCTaGGACTTCTCCACGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTSIKPT*DFSTEA
Trigger: TGCCTCCGTGGAGAAGTCTCAGGTGGGTTTTATTGA...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTTCCGGAGGACCTGGATaGGGTCGGAGTAGTTATCTA +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCASGGPG*GRSSYL
Trigger: TAGATAACTACTCCGACCGCATCCAGGTCCTCCGGA...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGCAACCCCCTTGCCTGTaGCCGTGGGAATTATTAAGG +
Preference number: 4 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRQPPCL*PWELLR
Trigger: CCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTG...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAACCAAACAGTCCCCCATaGCTTGGAGAAAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKEPNSPP*LGEKWS
Trigger: AGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGG...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGTTTCTGACAGGTGTGTaGGCTCACGGTTCAACATCC +
Preference number: 4 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRFLTGV*AHGSTS
Trigger: GGATGTTGAACCGTGAGCTCACACACCTGTCAGAAA...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACACGGTATCTGGGCCATTaGTATTTCTTCCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTRYLGH*YFFLLF
Trigger: GAAGAGGAGGAAGAAATATCAATGGCCCAGATACCG...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCAATAAAACAACAGCGGTaGGTCCACCCTTTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTAIKQQR*VHPFPR
Trigger: CCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTAT...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACAATCCTTTTGAACTTGTaGGAGGCCATCTCGCTGACA +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTILLNL*EAISLT
Trigger: TGTCAGCGAGATGGCCTCGCACAAGTTCAAAAGGAT...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGTGTCCAGGAATGTTGTaGAAATGTACTCTGAGACCT +
Preference number: 4 (lower is better)
Translates to: EARQGTDGGEIILVPGWKCPGML*KCTLRP
Trigger: AGGTCTCAGAGTACATTTCCACAACATTCCTGGACA...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCTTTCGCTACAAAATATaGACCCTGTACAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSAFRYKI*TLYRQH
Trigger: ATGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAA...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGGTATCGCCGGGATTGTaGAAAATCAAGCGGAAGACT +
Preference number: 4 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRVSPGL*KIKRKT
Trigger: AGTCTTCCGCTTGATTTTGCACAATCCCGGCGATAC...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR GCA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGTATACACCATTATTaGTTCCTCCTAGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: ARQGTDGGEIILVPGWKEGIHHY*FLLGQK
Trigger: CTTTTGCCCTAGGAGGAAGCAATAATGGTGTATACC...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCACAGTCCCCCATGGCTTaGAGAAAAATGGTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTAQSPMA*RKMVLH
Trigger: ATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTG...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTTTCAACCCTGTGATTTaGGACATGGGCTGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAFNPVI*DMGCKC
Trigger: ACACTTACAGCCCATGTCCCAAATCACAGGGTTGAA...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTGGAGAAAATTCAAAGTaGACCCAAAGTGGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAGENSK*TQSGRE
Trigger: TTCCCTTCCACTTTGGGTTCACTTTGAATTTTCTCC...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR TCA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTAGATCGAAGGATTATTaGTCAACGGACCGAATGACT +
Preference number: 4 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCARSKDY*STDRMT
Trigger: AGTCATTCGGTCCGTTGATCAATAATCCTTCGATCT...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CCA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACAAAGCCTCGGTTTAATTaGAGACAAGATCGAAGGATT +
Preference number: 4 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTKPRFN*RQDRRI
Trigger: AATCCTTCGATCTTGTCTCCAATTAAACCGAGGCTT...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS CCA 90 bp GCAGGCCGGGCCGGTCGCTGGTGTCCATGGCATCGGCGCGCTCTATaGGCCGGTGCGGCTGCCGCTCCCGCTCGGCGCGCTCCGCGCTGT +
Preference number: 5 (lower is better)
Translates to: AGRAGRWCPWHRRAL*AGAAAAPARRAPRC
Trigger: ACAGCGCGGAGCGCGCCGAGCGGGAGCGGCAGCCGCACCGGCCCATAGAGCGCGCCGATGCCATGGACACCAGCGACCGGCCCGGCCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS GCA 90 bp ACAGACCCGGGGGCGCTGCGGGCCAATCGCCCCCGGGCCGGGCTCTaGAGCTTCCTTTCGGCGCCTGGAGCTCTGCTCAGTGCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: TDPGALRANRPRAGL*SFLSAPGALLSARR
Trigger: CCGCCGGGCACTGAGCAGAGCTCCAGGCGCCGAAAGGAAGCTGCAGAGCCCGGCCCGGGGGCGATTGGCCCGCAGCGCCCCCGGGTCTGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS CCA 90 bp AGGACATGCGGGTCGTGCGCAGGCCGGGCCGGTCGCTGGTGTCCATaGCATCGGCGCGCTCTATGGGCCGGTGCGGCTGCCGCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: RTCGSCAGRAGRWCP*HRRALWAGAAAAPA
Trigger: AGCGGGAGCGGCAGCCGCACCGGCCCATAGAGCGCGCCGATGCCATGGACACCAGCGACCGGCCCGGCCTGCGCACGACCCGCATGTCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS CCA 90 bp CGAGGCTGCCGCCACAGGTGCTGCGGGGGAGGCTTCAGGGTGGCCTaGCCCTCCCGGGGCCCGGGCAGTGACAGAGACAGGCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: RGCRHRCCGGGFRVA*PSRGPGSDRDRLLS
Trigger: GGAAAGGAGCCTGTCTCTGTCACTGCCCGGGCCCCGGGAGGGCCAGGCCACCCTGAAGCCTCCCCCGCAGCACCTGTGGCGGCAGCCTCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp GCCCCAGCCCCGCCCACCATGTCGATGACCATCTTGCGTAGGCTCTGCCGCTGGGGTGGCCTGGCCCCCTaGACTCCTCCTCGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: APAPPTMSMTILRRLCRWGGLAP*TPPRVA
Trigger: CGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCACC...CCAGCGGCAGAGCCTACGCAAGATGGTCATCGACATGGTGGGCGGGGCTGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS CCA 90 bp TCCCCAAATGTCCCTGCGCAGGCACTGCAAGCCCTCTTGGCAGCCTaGTGCTCTCGTTGGGCCTCCACCTCGGCCGCCGTGGAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: SPNVPAQALQALLAA*CSRWASTSAAVEGR
Trigger: CCTCCCCTCCACGGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS GCA 90 bp CCTGGCGGCCCAAATCCTGGCAGCTGCGGAGAAGCCGAAGGCGTCTaGGGAAAGTTGGGGACGGGCTGGCGAAGAAGACGGGCGAGGAGG +
Preference number: 5 (lower is better)
Translates to: PGGPNPGSCGEAEGV*GKLGTGWRRRRARR
Trigger: CCTCCTCGCCCGTCTTCTTCGCCAGCCCGTCCCCAACTTTCCGCAGACGCCTTCGGCTTCTCCGCAGCTGCCAGGATTTGGGCCGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293683.9
CDS CCA 90 bp TGCCTCGAAGCTGTCGTTCTCGGCCCTGGTGATGGAAATCCGCGGTaGGATCAGCAGCGGCAGGGTGGTGGGCCGTGGCGGCAGAGGGAC +
Preference number: 5 (lower is better)
Translates to: CLEAVVLGPGDGNPR*DQQRQGGGPWRQRD
Trigger: GTCCCTCTGCCGCCACGGCCCACCACCCTGCCGCTGCTGATCCCACCGCGGATTTCCATCACCAGGGCCGAGAACGACAGCTTCGAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS GCA 90 bp TCTCCCTCGACCTCTCGTCCCCGGTCCCTGCCACGGACAGGGCACTaGGACTCCTCTTCATCTCGCCAACCTAGCGCGCCGTTGGGACTG +
Preference number: 5 (lower is better)
Translates to: SPSTSRPRSLPRTGH*DSSSSRQPSAPLGL
Trigger: CAGTCCCAACGGCGCGCTAGGTTGGCGAGATGAAGAGGAGTCGCAGTGCCCTGTCCGTGGCAGGGACCGGGGACGAGAGGTCGAGGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS CCA 90 bp CAAATCCTGGCAGCTGCGGAGAAGCCGAAGGCGTCTGCGGAAAGTTaGGGACGGGCTGGCGAAGAAGACGGGCGAGGAGGGCGGCGAACG +
Preference number: 5 (lower is better)
Translates to: QILAAAEKPKASAES*GRAGEEDGRGGRRT
Trigger: CGTTCGCCGCCCTCCTCGCCCGTCTTCTTCGCCAGCCCGTCCCCAACTTTCCGCAGACGCCTTCGGCTTCTCCGCAGCTGCCAGGATTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293683.9
CDS CCA 90 bp ATGTGTCCTCCCCAAATGTCCCTGCGCAGGCACTGCAAGCCCTCTTaGCAGCCTGGTGCTCTCGTTGGGCCTCCACCTCGGCCGCCGTGG +
Preference number: 5 (lower is better)
Translates to: MCPPQMSLRRHCKPS*QPGALVGPPPRPPW
Trigger: CCACGGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAGGACACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS CCA 90 bp CAGGGCACTGCGACTCCTCTTCATCTCGCCAACCTAGCGCGCCGTTaGGACTGCGGTGGCCATGTCGGCAGGGCCAGGGCCTCCTATTGC +
Preference number: 5 (lower is better)
Translates to: QGTATPLHLANLARR*DCGGHVGRARASYC
Trigger: GCAATAGGAGGCCCTGGCCCTGCCGACATGGCCACCGCAGTCCCAACGGCGCGCTAGGTTGGCGAGATGAAGAGGAGTCGCAGTGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS-3UTR CAA 90 bp CCTCCCCAAAGCCCTCGACTCCTAGGCTTCCTTTCCCGCTCCGTCCCGCCCCAGCTCTGCCGCTGGCGCTaGCTGAGGTTCTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: PPQSPRLLGFLSRSVPPQLCRWR*LRFWKM
Trigger: CATCTTCCAGAACCTCAGCAAGCGCCAGCGGCAGAG...CTGGGGCGGGACGGAGCGGGAAAGGAAGCCTAGGAGTCGAGGGCTTTGGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CAA 90 bp GCCCCAGCCCCGCCCACCATGTCGATGACCATCTTGCGTAGGCTCTGCCGCTGGAGGAGGGTCATGTGCTaGGACATGTCCGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: APAPPTMSMTILRRLCRWRRVMC*DMSVAS
Trigger: GCTGGCCACGGACATGTCCAAGCACATGACCCTCCT...CCAGCGGCAGAGCCTACGCAAGATGGTCATCGACATGGTGGGCGGGGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CAA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCAAGGCCCCACACCTGCTaGGGCCCAGGTAGAGACTCC +
Preference number: 5 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRARPHTC*GPGRDS
Trigger: GGAGTCTCTACCTGGGCCCAAGCAGGTGTGGGGCCT...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS GCA 90 bp CTGGGAGTGCGGATGTGTCCTCCCCAAATGTCCCTGCGCAGGCACTaGAAGCCCTCTTGGCAGCCTGGTGCTCTCGTTGGGCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: LGVRMCPPQMSLRRH*KPSWQPGALVGPPP
Trigger: AGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAGGACACATCCGCACTCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS GCA 90 bp GCCACCAGGAGCTGGGAGTGCGGATGTGTCCTCCCCAAATGTCCCTaGGCAGGCACTGCAAGCCCTCTTGGCAGCCTGGTGCTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: ATRSWECGCVLPKCP*AGTASPLGSLVLSL
Trigger: CAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAGGACACATCCGCACTCCCAGCTCCTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS-3UTR CAA 90 bp GCCCCAGCCCCGCCCACCATGTCGATGACCATCTTGCGTAGGCTCTGCCGCTGGCCTCCCAGGCTATGGTaGCATCCAGAGCTTCCTCGA +
Preference number: 5 (lower is better)
Translates to: APAPPTMSMTILRRLCRWPPRLW*HPELPR
Trigger: TCGAGGAAGCTCTGGATGCAACCATAGCCTGGGAGG...CCAGCGGCAGAGCCTACGCAAGATGGTCATCGACATGGTGGGCGGGGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CAA 90 bp CCAACGGGAGACCTCCTTCCCTACCTTCCCGACTGGGTCAGCCAGGGAAGGGCAGCCACTGCAACCCCCTaGCCTGTGGCCGTGGGAATT +
Preference number: 5 (lower is better)
Translates to: PTGDLLPYLPDWVSQGRAATATP*PVAVGI
Trigger: AATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC...TGCCCTTCCCTGGCTGACCCAGTCGGGAAGGTAGGGAAGGAGGTCTCCCGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS TCA 90 bp CAGCGGGGACCGCTTGTTACTGGGAACGGGCACATTGGTCAGGAGTaGGAAGTTGCTACGGACGCTCCGGAGGCTGGCCAGCACCTGAGC +
Preference number: 5 (lower is better)
Translates to: QRGPLVTGNGHIGQE*EVATDAPEAGQHLS
Trigger: GCTCAGGTGCTGGCCAGCCTCCGGAGCGTCCGTAGCAACTTCTCACTCCTGACCAATGTGCCCGTTCCCAGTAACAAGCGGTCCCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293683.9
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS CCA 90 bp ACTGCTGACACGTTTCTTCTGACAGCGTGGCCTTGCAGACAGGGGTaGGGCCGCCCAGCGGGGACCGCTTGTTACTGGGAACGGGCACAT +
Preference number: 5 (lower is better)
Translates to: TADTFLLTAWPCRQG*GRPAGTACYWERAH
Trigger: ATGTGCCCGTTCCCAGTAACAAGCGGTCCCCGCTGGGCGGCCCCACCCCTGTCTGCAAGGCCACGCTGTCAGAAGAAACGTGTCAGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293683.9
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS-3UTR CAA 90 bp GGGTGGCGGAGATGGGCTCTGCCGGATGGCGCTGTAGTACCAGTCCCGGTTGTCCGCAGTCAATGCCTCTaGGGCTGTGCACGGTATCTG +
Preference number: 5 (lower is better)
Translates to: GWRRWALPDGAVVPVPVVRSQCL*GCARYL
Trigger: CAGATACCGTGCACAGCCCAAGAGGCATTGACTGCG...GACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CAA 90 bp GGGTGGCGGAGATGGGCTCTGCCGGATGGCGCTGTAGTACCAGTCCCGGTTGTCAGCGCCAGCTCCGAATaGGTGTTGATGAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: GWRRWALPDGAVVPVPVVSASSE*VLMRNW
Trigger: CCAGTTCCTCATCAACACCAATTCGGAGCTGGCGCT...GACAACCGGGACTGGTACTACAGCGCCATCCGGCAGAGCCCATCTCCGCCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CAA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGAGGTGGCCTGGCCCCCTaGACTCCTCCTCGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: ATATPLPVAVGIIKAETRGGLAP*TPPRVA
Trigger: CGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCACC...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGAGCCTGGTGCTCTCGTaGGGCCTCCACCTCGGCCGC +
Preference number: 5 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGSLVLS*GLHLGR
Trigger: GCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCT...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp GGTGGCCTGGCCCCCTTGACTCCTCCTCGGGTGGCGGAGATGGGCTCTGCCGGAACGGTATCTGGGCCATaGATATTTCTTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GGLAPLTPPRVAEMGSAGTVSGP*IFLPPL
Trigger: AAGAGGAGGAAGAAATATCAATGGCCCAGATACCGT...TCCGGCAGAGCCCATCTCCGCCACCCGAGGAGGAGTCAAGGGGGCCAGGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS GCA 90 bp TCCAAGCAGGGAGAAGGGGGCTTTGAAGAGCCAGGGCAGAGGGGCTaGTGTGGCTTACAGCAACCACGAATTCCTCCCGGGACGAGAACT +
Preference number: 5 (lower is better)
Translates to: SKQGEGGFEEPGQRG*CGLQQPRIPPGTRT
Trigger: AGTTCTCGTCCCGGGAGGAATTCGTGGTTGCTGTAAGCCACAGCAGCCCCTCTGCCCTGGCTCTTCAAAGCCCCCTTCTCCCTGCTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS-3UTR CAA 90 bp AATTCCTCCCGGGACGAGAACTCATCCGGAGCCACAGGTGCACTGCCTGTGGACATGTCGATGACCATCTaGCGTAGGCTCTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: NSSRDENSSGATGALPVDMSMTI*RRLCRW
Trigger: CCAGCGGCAGAGCCTACGCAAGATGGTCATCGACAT...GTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS-3UTR CAA 90 bp CAACGACTCCTGGGCCGGGGATGCCTCCCAGGCTATGGTTGCATCCAGAGCTTCCGGTTCAACATCCTTTaGAACTGGTCCCACCAGCCC +
Preference number: 5 (lower is better)
Translates to: QRLLGRGCLPGYGCIQSFRFNIL*NWSHQP
Trigger: GGGCTGGTGGGACCAGTTCAAAAGGATGTTGAACCG...GAAGCTCTGGATGCAACCATAGCCTGGGAGGCATCCCCGGCCCAGGAGTCGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS GCA 90 bp ACCGCTTGTTACTGGGAACGGGCACATTGGTCAGGAGTGAGAAGTTaGTACGGACGCTCCGGAGGCTGGCCAGCACCTGAGCAAATGGTG +
Preference number: 5 (lower is better)
Translates to: TACYWERAHWSGVRS*YGRSGGWPAPEQMV
Trigger: CACCATTTGCTCAGGTGCTGGCCAGCCTCCGGAGCGTCCGTAGCAACTTCTCACTCCTGACCAATGTGCCCGTTCCCAGTAACAAGCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293683.9
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS GCA 90 bp CGAATTCCTCCCGGGACGAGAACTCATCCGGAGCCACAGGTGCACTaGCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: RIPPGTRTHPEPQVH*LWTVPAVSNTLPPA
Trigger: AGCTGGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS-3UTR CAA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAGCGGCTGGGAGGGTCTaGGTCGCGGCGCTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLAAGRV*VAALAV
Trigger: AACAGCAAGCGCCGCGACCAAGACCCTCCCAGCCGC...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp GCCACAGGTGCACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTCCAGCTCAAACTGGAACTaGTCAGGCAGGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ATGALPVDCACCVKYTASSSNWN*SGRGGW
Trigger: CCACCCACCCCTGCCTGACAAGTTCCAGTTTGAGCT...GGAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS GCA 90 bp AACCACGAATTCCTCCCGGGACGAGAACTCATCCGGAGCCACAGGTaGACTGCCTGTGGACTGTGCCTGCTGTGTCAAATACACTGCCTC +
Preference number: 5 (lower is better)
Translates to: NHEFLPGRELIRSHR*TACGLCLLCQIHCL
Trigger: GAGGCAGTGTATTTGACACAGCAGGCACAGTCCACAGGCAGTGCACCTGTGGCTCCGGATGAGTTCTCGTCCCGGGAGGAATTCGTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS-3UTR CAA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGCCCAGCGGGGACCGCTaGTTACTGGGAACGGGCACA +
Preference number: 5 (lower is better)
Translates to: EARQGTDGGEIILVPGWKPSGDR*LLGTGT
Trigger: TGTGCCCGTTCCCAGTAACAAGCGGTCCCCGCTGGG...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCGCACTGCAAGCCCTCTaGGCAGCCTGGTGCTCTCGT +
Preference number: 5 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSAALQAL*AAWCSR
Trigger: ACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGC...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS TCA 90 bp CAGCAGGTCCCGCTCCTGGAATATCATGTACATGATGCAGGTGAGTaGGCGGCCTCCAGCGTAATCCGACACGCAAAAGATGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: QQVPLLEYHVHDAGE*AASSVIRHAKDVQA
Trigger: GGCCTGAACATCTTTTGCGTGTCGGATTACGCTGGAGGCCGCTCACTCACCTGCATCATGTACATGATATTCCAGGAGCGGGACCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000590407.1
ENST00000592685.5
CDS-3UTR CAA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGCAGGTTCTCCAGTTCTaGGGCCAGGAGCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGQVLQF*GQELFL
Trigger: CAAGAAGAGCTCCTGGCCCAAGAACTGGAGAACCTG...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGAAGCTCAAACTGGAACTaGTCAGGCAGGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ATATPLPVAVGIIKAETRSSNWN*SGRGGW
Trigger: CCACCCACCCCTGCCTGACAAGTTCCAGTTTGAGCT...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS TCA 90 bp GTCCGTGAACACTGCCTGGAATATCATGTACATGATGCAGGTGAGTaGGCGGCCTCCAGCGTAATCCGACACGCAAAAGATGTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: VREHCLEYHVHDAGE*AASSVIRHAKDVQA
Trigger: GGCCTGAACATCTTTTGCGTGTCGGATTACGCTGGAGGCCGCTCACTCACCTGCATCATGTACATGATATTCCAGGCAGTGTTCACGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591971.5
CDS-3UTR CAA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGAGCGCCAGCTCCGAATaGGTGTTGATGAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: EARQGTDGGEIILVPGWKSASSE*VLMRNW
Trigger: CCAGTTCCTCATCAACACCAATTCGGAGCTGGCGCT...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACACTCTGCCGCTGGCGCTaGCTGAGGTTCTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTLCRWR*LRFWKM
Trigger: CATCTTCCAGAACCTCAGCAAGCGCCAGCGGCAGAG...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACAAGGAGGGTCATGTGCTaGGACATGTCCGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTRRVMC*DMSVAS
Trigger: GCTGGCCACGGACATGTCCAAGCACATGACCCTCCT...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS TCA 90 bp GAAGCCTGTAAGGCTCAGGGCCCTGGAGAACATTTCCTAGGAGTTTaGAGCCTTGGTCTGAAGGAAGCACCATTATTGCTCACCCAGTGG +
Preference number: 5 (lower is better)
Translates to: EACKAQGPGEHFLGV*SLGLKEAPLLLTQW
Trigger: CCACTGGGTGAGCAATAATGGTGCTTCCTTCAGACCAAGGCTTCAAACTCCTAGGAAATGTTCTCCAGGGCCCTGAGCCTTACAGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590407.1
CDS-3UTR CAA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTGTCAGGAGTGAGAAGTaGCTACGGACGCTCCGGAGG +
Preference number: 5 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAVRSEK*LRTLRR
Trigger: CCTCCGGAGCGTCCGTAGCAACTTCTCACTCCTGAC...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp GCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAACTGGGAACGGGCACATaGGTCAGGAGTGAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: ARQGTDGGEIILVPGWKELGTGT*VRSEKL
Trigger: CAACTTCTCACTCCTGACCAATGTGCCCGTTCCCAG...TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGAAACATCCTTTTGAACTaGTGCGAGGCCATCTCGCTG +
Preference number: 5 (lower is better)
Translates to: ATATPLPVAVGIIKAETRNILLN*CEAISL
Trigger: CAGCGAGATGGCCTCGCACAAGTTCAAAAGGATGTT...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp CCTTCCAAACAGTCCCCCATGGCTTGGAGAAAAATGGTCTTGCATCTGTCTGCCTCTTGGTCGCGGCGCTaGCTGTTTTTCTCGTTCCTT +
Preference number: 5 (lower is better)
Translates to: PSKQSPMAWRKMVLHLSASWSRR*LFFSFL
Trigger: AAGGAACGAGAAAAACAGCAAGCGCCGCGACCAAGA...GGCAGACAGATGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGTTTGGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGAATGTTCAGGCCCCACTaGTTCAGGTTCTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: ATATPLPVAVGIIKAETRMFRPH*FRFSSS
Trigger: AGAACTGGAGAACCTGAACAAGTGGGGCCTGAACAT...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp ACTTCCCATAAAACAACAGCGGTGAGTCCACCCTTTTCCCAGGACTATGGTACACCTCCCAGGCTATGGTaGCATCCAGAGCTTCCTCGA +
Preference number: 5 (lower is better)
Translates to: TSHKTTAVSPPFSQDYGTPPRLW*HPELPR
Trigger: TCGAGGAAGCTCTGGATGCAACCATAGCCTGGGAGG...TGTACCATAGTCCTGGGAAAAGGGTGGACTCACCGCTGTTGTTTTATGGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp AGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGGGGAGTATCGCCGGGATaGTGCAAAATCAAGCGGAAG +
Preference number: 5 (lower is better)
Translates to: RQGTDGGEIILVPGWKEGGVSPG*CKIKRK
Trigger: CTTCCGCTTGATTTTGCACAATCCCGGCGATACTCC...CCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp AGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGAAGGGCGGTTCAACATCCTTTaGAACTTGTGCGAGGCCATC +
Preference number: 5 (lower is better)
Translates to: RQGTDGGEIILVPGWKEGRFNIL*NLCEAI
Trigger: GATGGCCTCGCACAAGTTCAAAAGGATGTTGAACCG...CCCTTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp CAGGACTATGGTACAGTTTGTATAATACAGCAGGAACAGAGACTCTCCCAACGGATGTCGATGACCATCTaGCGTAGGCTCTGCCGCTGG +
Preference number: 5 (lower is better)
Translates to: QDYGTVCIIQQEQRLSQRMSMTI*RRLCRW
Trigger: CCAGCGGCAGAGCCTACGCAAGATGGTCATCGACAT...CCGTTGGGAGAGTCTCTGTTCCTGCTGTATTATACAAACTGTACCATAGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGACGGTATCTGGGCCATaGATATTTCTTCCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGTVSGP*IFLPPL
Trigger: AAGAGGAGGAAGAAATATCAATGGCCCAGATACCGT...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCACGCAGTCAATGCCTCTaGGGCTGTGCACGGTATCTG +
Preference number: 5 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTARSQCL*GCARYL
Trigger: CAGATACCGTGCACAGCCCAAGAGGCATTGACTGCG...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp AAGAAAGAAAAGGCCCACTCCGATCGCCGGCTGGGACAAAAACGACTTTCGCTAACAGTCCCCCATGGCTaGGAGAAAAATGGTCTTGCA +
Preference number: 5 (lower is better)
Translates to: KKEKAHSDRRLGQKRLSLTVPHG*EKNGLA
Trigger: TGCAAGACCATTTTTCTCCAAGCCATGGGGGACTGT...TAGCGAAAGTCGTTTTTGTCCCAGCCGGCGATCGGAGTGGGCCTTTTCTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp AAATGGTCTTGCATCTGTCTGCCGTATTGCTCAGGGACTAGCTGGGGGAGAGGGTCCACTTCATTCTGTTaGTCCAGGAATGTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: KWSCICLPYCSGTSWGRGSTSFC*SRNVVE
Trigger: TTCCACAACATTCCTGGACAAACAGAATGAAGTGGA...CCCTCTCCCCCAGCTAGTCCCTGAGCAATACGGCAGACAGATGCAAGACCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTGGCCAGGAGCTCTTCTaGATCGGTCTTCACCCCAAA +
Preference number: 5 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAGQELF*IGLHPK
Trigger: TTTGGGGTGAAGACCGATCAAGAAGAGCTCCTGGCC...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp GCCACTGCAACCCCCTTGCCTGTGGCCGTGGGAATTATTAAGGCAGAAACAAGATGGAGAAAAATGGTCTaGCATCTGTCTGCCGTATTG +
Preference number: 5 (lower is better)
Translates to: ATATPLPVAVGIIKAETRWRKMV*HLSAVL
Trigger: CAATACGGCAGACAGATGCAAGACCATTTTTCTCCA...TCTTGTTTCTGCCTTAATAATTCCCACGGCCACAGGCAAGGGGGTTGCAGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS CCA 90 bp TCATTCTGTTTGTCCAGGAATGTTGTGGAAATGTACTCTGAGACCTaGTTTCCGGACCTGCTCATTTCTGACAGGTGTGTGAGCTCACGG +
Preference number: 5 (lower is better)
Translates to: SFCLSRNVVEMYSET*FPDLLISDRCVSSR
Trigger: CCGTGAGCTCACACACCTGTCAGAAATGAGCAGGTCCGGAAACCAGGTCTCAGAGTACATTTCCACAACATTCCTGGACAAACAGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000586275.1
ENST00000591971.5
ENST00000592685.5
CDS-3UTR CAA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTCGGGGAATGTTAGAGTaGTTCAGGCTGTTACTATGC +
Preference number: 5 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCARGMLE*FRLLLC
Trigger: GCATAGTAACAGCCTGAACAACTCTAACATTCCCCG...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGCAGGAGCATCTACAGTaGCTGTGTTTCTTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: EARQGTDGGEIILVPGWKQEHLQ*LCFFLF
Trigger: AAAAAGAAAGAAACACAGCAACTGTAGATGCTCCTG...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp CGGCTGGGACAAAAACGACTTTCGCTACAAAATATGAACCCTGTACAGACAGCAGGAGGAGAAATTATTTaGGTGCCAGGGTGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: RLGQKRLSLQNMNPVQTAGGEII*VPGWKE
Trigger: TTCCTTCCACCCTGGCACCAAAATAATTTCTCCTCC...TGCTGTCTGTACAGGGTTCATATTTTGTAGCGAAAGTCGTTTTTGTCCCAGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp GAGGCTAGGCAAGGTACGGATGGAGGAGAAATTATTTTGGTGCCAGGGTGGAAGGGACTATGGTACAGTTaGTATAATACAGCAGGAACA +
Preference number: 5 (lower is better)
Translates to: EARQGTDGGEIILVPGWKGLWYS*YNTAGT
Trigger: TGTTCCTGCTGTATTATACAAACTGTACCATAGTCC...CTTCCACCCTGGCACCAAAATAATTTCTCCTCCATCCGTACCTTGCCTAGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTGGGTATACACCATTATaGCTTCCTCCTAGGGCAAAA +
Preference number: 5 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAGYTPL*LPPRAK
Trigger: TTTTGCCCTAGGAGGAAGCAATAATGGTGTATACCC...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS-3UTR CAA 90 bp ATGACTGATCGTCAAAGTGGACAATACACAAGCAGCTTACAGAGGTCCTGTGCTAAGATCGAAGGATTATaGATCAACGGACCGAATGAC +
Preference number: 5 (lower is better)
Translates to: MTDRQSGQYTSSLQRSCAKIEGL*INGPND
Trigger: GTCATTCGGTCCGTTGATCAATAATCCTTCGATCTT...AGCACAGGACCTCTGTAAGCTGCTTGTGTATTGTCCACTTTGACGATCAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS CCA 72 bp GCCGGTCGCTGGTGTCCATGGCATCGGCGCGCTCTATaGGCCGGTGCGGCTGCCGCTCCCGCTCGGCGCGCT +
Preference number: 6 (lower is better)
Translates to: AGRWCPWHRRAL*AGAAAAPARRA
Trigger: AGCGCGCCGAGCGGGAGCGGCAGCCGCACCGGCCCATAGAGCGCGCCGATGCCATGGACACCAGCGACCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS CCA 72 bp GGGTCGTGCGCAGGCCGGGCCGGTCGCTGGTGTCCATaGCATCGGCGCGCTCTATGGGCCGGTGCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: GSCAGRAGRWCP*HRRALWAGAAA
Trigger: GGCAGCCGCACCGGCCCATAGAGCGCGCCGATGCCATGGACACCAGCGACCGGCCCGGCCTGCGCACGACCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS GCA 72 bp GGGGCGCTGCGGGCCAATCGCCCCCGGGCCGGGCTCTaGAGCTTCCTTTCGGCGCCTGGAGCTCTGCTCAGT +
Preference number: 6 (lower is better)
Translates to: GALRANRPRAGL*SFLSAPGALLS
Trigger: ACTGAGCAGAGCTCCAGGCGCCGAAAGGAAGCTGCAGAGCCCGGCCCGGGGGCGATTGGCCCGCAGCGCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS CAA 72 bp CGGCGGCGAGGGCGACGCAGGTCGGCCCCCAGCATGTaGGCACGGTCGGATTCGGGGGTCTCCCTCGACCTC +
Preference number: 6 (lower is better)
Translates to: RRRGRRRSAPSM*ARSDSGVSLDL
Trigger: GAGGTCGAGGGAGACCCCCGAATCCGACCGTGCCAACATGCTGGGGGCCGACCTGCGTCGCCCTCGCCGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS TCA 72 bp CTTCAGGGTGGCCTGGCCCTCCCGGGGCCCGGGCAGTaGCAGAGACAGGCTCCTTTCCGAGGGGACGGTCGG +
Preference number: 6 (lower is better)
Translates to: LQGGLALPGPGQ*QRQAPFRGDGR
Trigger: CCGACCGTCCCCTCGGAAAGGAGCCTGTCTCTGTCACTGCCCGGGCCCCGGGAGGGCCAGGCCACCCTGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS CCA 72 bp GCACTGCAAGCCCTCTTGGCAGCCTGGTGCTCTCGTTaGGCCTCCACCTCGGCCGCCGTGGAGGGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: ALQALLAAWCSR*ASTSAAVEGRP
Trigger: GGGCCTCCCCTCCACGGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS CCA 72 bp AGGACATGCGGGTCGTGCGCAGGCCGGGCCGGTCGCTaGTGTCCATGGCATCGGCGCGCTCTATGGGCCGGT +
Preference number: 6 (lower is better)
Translates to: RTCGSCAGRAGR*CPWHRRALWAG
Trigger: ACCGGCCCATAGAGCGCGCCGATGCCATGGACACCAGCGACCGGCCCGGCCTGCGCACGACCCGCATGTCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380702.7
CDS CCA 72 bp GGCGGCGAGGGCGACGCAGGTCGGCCCCCAGCATGTTaGCACGGTCGGATTCGGGGGTCTCCCTCGACCTCT +
Preference number: 6 (lower is better)
Translates to: GGEGDAGRPPAC*HGRIRGSPSTS
Trigger: AGAGGTCGAGGGAGACCCCCGAATCCGACCGTGCCAACATGCTGGGGGCCGACCTGCGTCGCCCTCGCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS CAA 72 bp GGCACTGCAAGCCCTCTTGGCAGCCTGGTGCTCTCGTaGGGCCTCCACCTCGGCCGCCGTGGAGGGGAGGCC +
Preference number: 6 (lower is better)
Translates to: GTASPLGSLVLS*GLHLGRRGGEA
Trigger: GGCCTCCCCTCCACGGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS GCA 72 bp CCTGCGCAGGCACTGCAAGCCCTCTTGGCAGCCTGGTaGTCTCGTTGGGCCTCCACCTCGGCCGCCGTGGAG +
Preference number: 6 (lower is better)
Translates to: PAQALQALLAAW*SRWASTSAAVE
Trigger: CTCCACGGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS TCA 72 bp ATCTGCCCGGAGGGTGCCGACGGGTGTCCTCATCGCTaGAGGGGAAGTGGGTCAGGGACTCGGGGCCCGTGG +
Preference number: 6 (lower is better)
Translates to: ICPEGADGCPHR*RGSGSGTRGPW
Trigger: CCACGGGCCCCGAGTCCCTGACCCACTTCCCCTTCAGCGATGAGGACACCCGTCGGCACCCTCCGGGCAGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440014.6
CDS CCA 72 bp GCGACTCCTCTTCATCTCGCCAACCTAGCGCGCCGTTaGGACTGCGGTGGCCATGTCGGCAGGGCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: ATPLHLANLARR*DCGGHVGRARA
Trigger: GGCCCTGGCCCTGCCGACATGGCCACCGCAGTCCCAACGGCGCGCTAGGTTGGCGAGATGAAGAGGAGTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS CCA 72 bp GCTGTCGTTCTCGGCCCTGGTGATGGAAATCCGCGGTaGGATCAGCAGCGGCAGGGTGGTGGGCCGTGGCGG +
Preference number: 6 (lower is better)
Translates to: AVVLGPGDGNPR*DQQRQGGGPWR
Trigger: CCGCCACGGCCCACCACCCTGCCGCTGCTGATCCCACCGCGGATTTCCATCACCAGGGCCGAGAACGACAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS GCA 72 bp ACCTCTCGTCCCCGGTCCCTGCCACGGACAGGGCACTaGGACTCCTCTTCATCTCGCCAACCTAGCGCGCCG +
Preference number: 6 (lower is better)
Translates to: TSRPRSLPRTGH*DSSSSRQPSAP
Trigger: CGGCGCGCTAGGTTGGCGAGATGAAGAGGAGTCGCAGTGCCCTGTCCGTGGCAGGGACCGGGGACGAGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS CCA 72 bp GCAGCTGCGGAGAAGCCGAAGGCGTCTGCGGAAAGTTaGGGACGGGCTGGCGAAGAAGACGGGCGAGGAGGG +
Preference number: 6 (lower is better)
Translates to: AAAEKPKASAES*GRAGEEDGRGG
Trigger: CCCTCCTCGCCCGTCTTCTTCGCCAGCCCGTCCCCAACTTTCCGCAGACGCCTTCGGCTTCTCCGCAGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293683.9
CDS CAA 72 bp GGCAGCTGCGGAGAAGCCGAAGGCGTCTGCGGAAAGTaGGGGACGGGCTGGCGAAGAAGACGGGCGAGGAGG +
Preference number: 6 (lower is better)
Translates to: GSCGEAEGVCGK*GTGWRRRRARR
Trigger: CCTCCTCGCCCGTCTTCTTCGCCAGCCCGTCCCCAACTTTCCGCAGACGCCTTCGGCTTCTCCGCAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293683.9
CDS CAA 72 bp TGCGACTCCTCTTCATCTCGCCAACCTAGCGCGCCGTaGGGACTGCGGTGGCCATGTCGGCAGGGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: CDSSSSRQPSAP*GLRWPCRQGQG
Trigger: GCCCTGGCCCTGCCGACATGGCCACCGCAGTCCCAACGGCGCGCTAGGTTGGCGAGATGAAGAGGAGTCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS CAA 90 bp CCAAATCCTGGCAGCTGCGGAGAAGCCGAAGGCGTCTGCGGAAAGTaGGGGACGGGCTGGCGAAGAAGACGGGCGAGGAGGGCGGCGAAC +
Preference number: 6 (lower is better)
Translates to: PNPGSCGEAEGVCGK*GTGWRRRRARRAAN
Trigger: GTTCGCCGCCCTCCTCGCCCGTCTTCTTCGCCAGCCCGTCCCCAACTTTCCGCAGACGCCTTCGGCTTCTCCGCAGCTGCCAGGATTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293683.9
CDS CAA 90 bp GATGTGTCCTCCCCAAATGTCCCTGCGCAGGCACTGCAAGCCCTCTaGGCAGCCTGGTGCTCTCGTTGGGCCTCCACCTCGGCCGCCGTG +
Preference number: 6 (lower is better)
Translates to: DVSSPNVPAQALQAL*AAWCSRWASTSAAV
Trigger: CACGGCGGCCGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAGGACACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS GCA 72 bp CCTCTTCATCTCGCCAACCTAGCGCGCCGTTGGGACTaGGGTGGCCATGTCGGCAGGGCCAGGGCCTCCTAT +
Preference number: 6 (lower is better)
Translates to: PLHLANLARRWD*GGHVGRARASY
Trigger: ATAGGAGGCCCTGGCCCTGCCGACATGGCCACCGCAGTCCCAACGGCGCGCTAGGTTGGCGAGATGAAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS GCA 72 bp TTCGGGGGTCTCCCTCGACCTCTCGTCCCCGGTCCCTaGCACGGACAGGGCACTGCGACTCCTCTTCATCTC +
Preference number: 6 (lower is better)
Translates to: FGGLPRPLVPGP*HGQGTATPLHL
Trigger: GAGATGAAGAGGAGTCGCAGTGCCCTGTCCGTGGCAGGGACCGGGGACGAGAGGTCGAGGGAGACCCCCGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS CAA 90 bp ACAGGGCACTGCGACTCCTCTTCATCTCGCCAACCTAGCGCGCCGTaGGGACTGCGGTGGCCATGTCGGCAGGGCCAGGGCCTCCTATTG +
Preference number: 6 (lower is better)
Translates to: TGHCDSSSSRQPSAP*GLRWPCRQGQGLLL
Trigger: CAATAGGAGGCCCTGGCCCTGCCGACATGGCCACCGCAGTCCCAACGGCGCGCTAGGTTGGCGAGATGAAGAGGAGTCGCAGTGCCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS GCA 72 bp GGCGGGGGCGGCTGGGAGGGTCTTGGTCGCGGCGCTTaGTGTTTTTCTCGTTCCTTCATCGTGGGTGATGGG +
Preference number: 6 (lower is better)
Translates to: GGGGWEGLGRGA*CFSRSFIVGDG
Trigger: CCCATCACCCACGATGAAGGAACGAGAAAAACAGCAAGCGCCGCGACCAAGACCCTCCCAGCCGCCCCCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000586275.1
ENST00000591971.5
ENST00000592685.5
CDS CAA 72 bp TCCCCAAATGTCCCTGCGCAGGCACTGCAAGCCCTCTaGGCAGCCTGGTGCTCTCGTTGGGCCTCCACCTCG +
Preference number: 6 (lower is better)
Translates to: SPNVPAQALQAL*AAWCSRWASTS
Trigger: CGAGGTGGAGGCCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS GCA 72 bp CCAAATCCTGGCAGCTGCGGAGAAGCCGAAGGCGTCTaGGGAAAGTTGGGGACGGGCTGGCGAAGAAGACGG +
Preference number: 6 (lower is better)
Translates to: PNPGSCGEAEGV*GKLGTGWRRRR
Trigger: CCGTCTTCTTCGCCAGCCCGTCCCCAACTTTCCGCAGACGCCTTCGGCTTCTCCGCAGCTGCCAGGATTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293683.9
CDS GCA 72 bp CGGATGTGTCCTCCCCAAATGTCCCTGCGCAGGCACTaGAAGCCCTCTTGGCAGCCTGGTGCTCTCGTTGGG +
Preference number: 6 (lower is better)
Translates to: RMCPPQMSLRRH*KPSWQPGALVG
Trigger: CCCAACGAGAGCACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAGGACACATCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS GCA 72 bp AGCTGGGAGTGCGGATGTGTCCTCCCCAAATGTCCCTaGGCAGGCACTGCAAGCCCTCTTGGCAGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: SWECGCVLPKCP*AGTASPLGSLV
Trigger: CACCAGGCTGCCAAGAGGGCTTGCAGTGCCTGCGCAGGGACATTTGGGGAGGACACATCCGCACTCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS CCA 72 bp ACGTTTCTTCTGACAGCGTGGCCTTGCAGACAGGGGTaGGGCCGCCCAGCGGGGACCGCTTGTTACTGGGAA +
Preference number: 6 (lower is better)
Translates to: TFLLTAWPCRQG*GRPAGTACYWE
Trigger: TTCCCAGTAACAAGCGGTCCCCGCTGGGCGGCCCCACCCCTGTCTGCAAGGCCACGCTGTCAGAAGAAACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293683.9
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS TCA 72 bp CATTCTCTGCCTCGAAGCTGTCGTTCTCGGCCCTGGTaGTGGAAATCCGCGGTGGGATCAGCAGCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: HSLPRSCRSRPW*WKSAVGSAAAG
Trigger: CCCTGCCGCTGCTGATCCCACCGCGGATTTCCATCACCAGGGCCGAGAACGACAGCTTCGAGGCAGAGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592685.5
CDS GCA 72 bp GGAGAAGGGGGCTTTGAAGAGCCAGGGCAGAGGGGCTaGTGTGGCTTACAGCAACCACGAATTCCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: GEGGFEEPGQRG*CGLQQPRIPPG
Trigger: CCCGGGAGGAATTCGTGGTTGCTGTAAGCCACAGCAGCCCCTCTGCCCTGGCTCTTCAAAGCCCCCTTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS GCA 72 bp TTCTCTGCCTCGAAGCTGACAGATCTGCCCGGAGGGTaGCGACGGGTGTCCTCATCGCTGAAGGGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: FSASKLTDLPGG*RRVSSSLKGKW
Trigger: CCACTTCCCCTTCAGCGATGAGGACACCCGTCGGCACCCTCCGGGCAGATCTGTCAGCTTCGAGGCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440014.6
CDS CAA 72 bp CCCAGCGGGGACCGCTTGTTACTGGGAACGGGCACATaGGTCAGGAGTGAGAAGTTGCTACGGACGCTCCGG +
Preference number: 6 (lower is better)
Translates to: PSGDRLLLGTGT*VRSEKLLRTLR
Trigger: CCGGAGCGTCCGTAGCAACTTCTCACTCCTGACCAATGTGCCCGTTCCCAGTAACAAGCGGTCCCCGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293683.9
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS TCA 72 bp CCGCTTGTTACTGGGAACGGGCACATTGGTCAGGAGTaGGAAGTTGCTACGGACGCTCCGGAGGCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: PLVTGNGHIGQE*EVATDAPEAGQ
Trigger: CTGGCCAGCCTCCGGAGCGTCCGTAGCAACTTCTCACTCCTGACCAATGTGCCCGTTCCCAGTAACAAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293683.9
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS GCA 72 bp TACTGGGAACGGGCACATTGGTCAGGAGTGAGAAGTTaGTACGGACGCTCCGGAGGCTGGCCAGCACCTGAG +
Preference number: 6 (lower is better)
Translates to: YWERAHWSGVRS*YGRSGGWPAPE
Trigger: CTCAGGTGCTGGCCAGCCTCCGGAGCGTCCGTAGCAACTTCTCACTCCTGACCAATGTGCCCGTTCCCAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293683.9
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS CCA 72 bp CCAGCGGGGACCGCTTGTTACTGGGAACGGGCACATTaGTCAGGAGTGAGAAGTTGCTACGGACGCTCCGGA +
Preference number: 6 (lower is better)
Translates to: PAGTACYWERAH*SGVRSCYGRSG
Trigger: TCCGGAGCGTCCGTAGCAACTTCTCACTCCTGACCAATGTGCCCGTTCCCAGTAACAAGCGGTCCCCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293683.9
ENST00000380702.7
ENST00000440014.6
ENST00000592685.5
CDS CAA 72 bp GACATGTCCGTGGCCAGCACCATGTCGATGACCATCTaGCGTAGGCTCTGCCGCTGGCGCTTGCTGAGGTTC +
Preference number: 6 (lower is better)
Translates to: DMSVASTMSMTI*RRLCRWRLLRF
Trigger: GAACCTCAGCAAGCGCCAGCGGCAGAGCCTACGCAAGATGGTCATCGACATGGTGCTGGCCACGGACATGTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000590407.1
ENST00000591971.5
ENST00000592685.5
CDS CCA 72 bp AGCAGGTCTCGCAGAAGAAATCCACCAAGGGCATCTTaGAGACTTAGCCCGCCTGGGGCTGCTGCACACAGA +
Preference number: 6 (lower is better)
Translates to: SRSRRRNPPRAS*RLSPPGAAAHR
Trigger: TCTGTGTGCAGCAGCCCCAGGCGGGCTAAGTCTCCAAGATGCCCTTGGTGGATTTCTTCTGCGAGACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344979.7
ENST00000589073.1
CDS GCA 72 bp GTAGTCAATAAAACCCACCCTGTGCCCGTCCATCAATaGCCCGAGCCTGTACCTGAGACTTCTCCACGGAGG +
Preference number: 6 (lower is better)
Translates to: VVNKTHPVPVHQ*PEPVPETSPRR
Trigger: CCTCCGTGGAGAAGTCTCAGGTACAGGCTCGGGGCATTGATGGACGGGCACAGGGTGGGTTTTATTGACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590407.1
CDS TCA 72 bp CCGCTCCTGGAATATCATGTACATGATGCAGGTGAGTaGGCGGCCTCCAGCGTAATCCGACACGCAAAAGAT +
Preference number: 6 (lower is better)
Translates to: PLLEYHVHDAGE*AASSVIRHAKD
Trigger: ATCTTTTGCGTGTCGGATTACGCTGGAGGCCGCTCACTCACCTGCATCATGTACATGATATTCCAGGAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000590407.1
ENST00000592685.5
CDS TCA 72 bp TGGCAGGTGAAGGCACCAAGGCTCAGAGAGGCGATGTaGCTTCTCCAAGATCATGCAGCTCATAAGTGGCAA +
Preference number: 6 (lower is better)
Translates to: WQVKAPRLREAM*LLQDHAAHKWQ
Trigger: TTGCCACTTATGAGCTGCATGATCTTGGAGAAGTCACATCGCCTCTCTGAGCCTTGGTGCCTTCACCTGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590407.1
CDS TCA 72 bp CACTGCCTGGAATATCATGTACATGATGCAGGTGAGTaGGCGGCCTCCAGCGTAATCCGACACGCAAAAGAT +
Preference number: 6 (lower is better)
Translates to: HCLEYHVHDAGE*AASSVIRHAKD
Trigger: ATCTTTTGCGTGTCGGATTACGCTGGAGGCCGCTCACTCACCTGCATCATGTACATGATATTCCAGGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591971.5
CDS CCA 72 bp CTGCCCAGGAATGTTGTGGAAATGTACTCTGAGACCTaGTTTCCGGACCTGCTCATTTCTGACAGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: LPRNVVEMYSET*FPDLLISDRCV
Trigger: CACACACCTGTCAGAAATGAGCAGGTCCGGAAACCAGGTCTCAGAGTACATTTCCACAACATTCCTGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589073.1
CDS TCA 72 bp AAGGCTCAGGGCCCTGGAGAACATTTCCTAGGAGTTTaGAGCCTTGGTCTGAAGGAAGCACCATTATTGCTC +
Preference number: 6 (lower is better)
Translates to: KAQGPGEHFLGV*SLGLKEAPLLL
Trigger: GAGCAATAATGGTGCTTCCTTCAGACCAAGGCTTCAAACTCCTAGGAAATGTTCTCCAGGGCCCTGAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590407.1
CDS TCA 72 bp CATCACCTGGAATATCATGTACATGATGCAGGTGAGTaGGCGGCCTCCAGCGTAATCCGACACGCAAAAGAT +
Preference number: 6 (lower is better)
Translates to: HHLEYHVHDAGE*AASSVIRHAKD
Trigger: ATCTTTTGCGTGTCGGATTACGCTGGAGGCCGCTCACTCACCTGCATCATGTACATGATATTCCAGGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586275.1
CDS GCA 72 bp AACAGCACAGAATGTACTGCCCTCGTCCTACTGGGCTaGAAAATAGCGAAAGCAATCACAGCCACTGTCTTT +
Preference number: 6 (lower is better)
Translates to: NSTECTALVLLG*KIAKAITATVF
Trigger: AAAGACAGTGGCTGTGATTGCTTTCGCTATTTTGCAGCCCAGTAGGACGAGGGCAGTACATTCTGTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590407.1
CDS CCA 72 bp TTGTCCAGGAATGTTGTGGAAATGTACTCTGAGACCTaGTTTCCGGACCTGCTCATTTCTGACAGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: LSRNVVEMYSET*FPDLLISDRCV
Trigger: CACACACCTGTCAGAAATGAGCAGGTCCGGAAACCAGGTCTCAGAGTACATTTCCACAACATTCCTGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293683.9
ENST00000344979.7
ENST00000380702.7
ENST00000440014.6
ENST00000586275.1
ENST00000591971.5
ENST00000592685.5
CDS TCA 72 bp CGAAAGCAATCACAGCCACTGTCTTTTGAGTACTTATaGTCTGCCAAGTATTGCTCTAAGCACTTGATCTCG +
Preference number: 6 (lower is better)
Translates to: RKQSQPLSFEYL*SAKYCSKHLIS
Trigger: CGAGATCAAGTGCTTAGAGCAATACTTGGCAGATCATAAGTACTCAAAAGACAGTGGCTGTGATTGCTTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590407.1