RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDE2A (Homo sapiens)

Ensembl gene IDs: ENSG00000186642

Ensembl transcript IDs: ENST00000334456.10, ENST00000376450.7, ENST00000418754.6, ENST00000420501.5, ENST00000441209.6, ENST00000444035.6, ENST00000475807.6, ENST00000485058.7, ENST00000490749.1, ENST00000535701.1, ENST00000536308.5, ENST00000536458.1, ENST00000536918.1, ENST00000537631.5, ENST00000538299.1, ENST00000538749.5, ENST00000539367.5, ENST00000540345.5, ENST00000540380.5, ENST00000541998.5, ENST00000542969.2, ENST00000543575.5, ENST00000543750.5, ENST00000544239.1, ENST00000544570.5, ENST00000546038.1

Found 1523 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTCCCTGGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGCTGGCTaGAGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCC +
Preference number: 1 (lower is better)
Translates to: TPWGSWLLCKGVQAG*RLSAHGCGGGGGSS
Trigger: GGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCTGCAGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR TCA 90 bp GGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGCGATTTCCCCT +
Preference number: 1 (lower is better)
Translates to: GCRRMAAAAAAARPA*GRPAGPACGQAISP
Trigger: AGGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR GCA 90 bp TGGACGGCTCGGGGAGCCTCCCTGGGCCCGCGCTGCTGCAGGACCTaGACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGC +
Preference number: 1 (lower is better)
Translates to: WTARGASLGPRCCRT*TLRRATRVCFSTAC
Trigger: GCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGAGGCTCCCCGAGCCGTCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
3UTR CCA 90 bp CTCTACTCCCTGGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGCTaGCTGCAGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTC +
Preference number: 1 (lower is better)
Translates to: LYSLGVLAPLQGGPG*LQAVGAWLRRRRRL
Trigger: GAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCTGCAGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR GCA 90 bp CATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTaGTGGCCCCGCCTGTGGGCAAGCGATTTCCCCTCCTGGATCCTC +
Preference number: 1 (lower is better)
Translates to: HGCGGGGGSSGLRKT*WPRLWASDFPSWIL
Trigger: GAGGATCCAGGAGGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR CCA 90 bp GGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTaGCCCCGCCTGTGGGCAAGCGATTTCCCCTCCTGGATCCTCTGT +
Preference number: 1 (lower is better)
Translates to: GCGGGGGSSGLRKTC*PRLWASDFPSWILC
Trigger: ACAGAGGATCCAGGAGGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR GCA 90 bp AGGAAGTCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTaGATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGGGC +
Preference number: 1 (lower is better)
Translates to: RKSWSRTQDPWLCSQ*IWPDQWRAVGGGLG
Trigger: GCCCAGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGACTTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
3UTR CCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTaGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGGGCAGGGAA +
Preference number: 1 (lower is better)
Translates to: SWSRTQDPWLCSQCI*PDQWRAVGGGLGRE
Trigger: TTCCCTGCCCAGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
3UTR GCA 90 bp GCCGGTGCTGTCGTCCACGCCGCGGTAGAAAAGCGGATGGGCATATaGGTCAGGGATGTTCAGGATCTGGCCCGTGGTCGCCACGTGTCC +
Preference number: 1 (lower is better)
Translates to: AGAVVHAAVEKRMGI*VRDVQDLARGRHVS
Trigger: GGACACGTGGCGACCACGGGCCAGATCCTGAACATCCCTGACGCATATGCCCATCCGCTTTTCTACCGCGGCGTGGACGACAGCACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CCA 90 bp AAAGCGGATGGGCATATGCGTCAGGGATGTTCAGGATCTGGCCCGTaGTCGCCACGTGTCCCGCGATGCCCTGATCGGCCGGGATGCGGA +
Preference number: 1 (lower is better)
Translates to: KADGHMRQGCSGSGP*SPRVPRCPDRPGCG
Trigger: TCCGCATCCCGGCCGATCAGGGCATCGCGGGACACGTGGCGACCACGGGCCAGATCCTGAACATCCCTGACGCATATGCCCATCCGCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CCA 90 bp GGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTGGCCCCGCCTGTaGGCAAGCGATTTCCCCTCCTGGATCCTCTGTTTCTTCATCCAG +
Preference number: 1 (lower is better)
Translates to: GGGSSGLRKTCWPRL*ASDFPSWILCFFIQ
Trigger: CTGGATGAAGAAACAGAGGATCCAGGAGGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR CCA 90 bp GGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTaGCTCATTCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTC +
Preference number: 1 (lower is better)
Translates to: GKRLAQRHTGRRKHG*LIHTWACLPVRGSL
Trigger: GAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR CCA 90 bp AAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATaGGGTCTCCCAAGCCCCAGGGCACAGGTGGATATGGCCTTGAAG +
Preference number: 1 (lower is better)
Translates to: KREASGRADPRVPAL*GLPSPRAQVDMALK
Trigger: CTTCAAGGCCATATCCACCTGTGCCCTGGGGCTTGGGAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR GCA 90 bp CAGGGATGTTCAGGATCTGGCCCGTGGTCGCCACGTGTCCCGCGATaGCCTGATCGGCCGGGATGCGGATCTCATAGCTCTCATCATCCA +
Preference number: 1 (lower is better)
Translates to: QGCSGSGPWSPRVPR*PDRPGCGSHSSHHP
Trigger: TGGATGATGAGAGCTATGAGATCCGCATCCCGGCCGATCAGGGCATCGCGGGACACGTGGCGACCACGGGCCAGATCCTGAACATCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR GCA 90 bp GGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGTCTCCCAGTaGGGGGATCCCTCCTGCCCATCAATCCCATCCTGCTTCTCCCCA +
Preference number: 1 (lower is better)
Translates to: GGSMAGSFIPGPVSQ*GDPSCPSIPSCFSP
Trigger: TGGGGAGAAGCAGGATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR GCA 90 bp TCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATGACAGAGCCCAGACTCAGCAAGGCG +
Preference number: 1 (lower is better)
Translates to: STRGSTADRASLTAR*RPEMSMTEPRLSKA
Trigger: CGCCTTGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535701.1
3UTR CCA 90 bp AAGTCTCCTTCTAGCTTGTTGAAGGCGCAGGCCAAGGCCACCACCTaGTCAGTGGCCCGGCTGATGACAGGGACACAGAGCATGGCCTGC +
Preference number: 1 (lower is better)
Translates to: KSPSSLLKAQAKATT*SVARLMTGTQSMAC
Trigger: GCAGGCCATGCTCTGTGTCCCTGTCATCAGCCGGGCCACTGACCAGGTGGTGGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTaGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGG +
Preference number: 1 (lower is better)
Translates to: EAQEGSTCPGSHRKS*SRTQDPWLCSQCIW
Trigger: CCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
3UTR GCA 90 bp CCAGGCCATCTTCCCACCAGCTGTGATAAGGGTCTTCAGCCTCATTaGACATGGCCCCACTCCCACTCACATGCTTCTCCACCGCCTGCA +
Preference number: 1 (lower is better)
Translates to: PGHLPTSCDKGLQPH*TWPHSHSHASPPPA
Trigger: TGCAGGCGGTGGAGAAGCATGTGAGTGGGAGTGGGGCCATGTGCAATGAGGCTGAAGACCCTTATCACAGCTGGTGGGAAGATGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541998.5
3UTR CCA 90 bp GATGGAGAAGGCCGTCGCCAGGTCCTCGTCGAACTTGCTGAACCATaGCCCATTGATCTTGTTCACCAGCTCGGCCACACCGATGACCTC +
Preference number: 1 (lower is better)
Translates to: DGEGRRQVLVELAEP*PIDLVHQLGHTDDL
Trigger: GAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCTGGCGACGGCCTTCTCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CCA 90 bp CATCTTCCCACCAGCTGTGATAAGGGTCTTCAGCCTCATTGCACATaGCCCCACTCCCACTCACATGCTTCTCCACCGCCTGCAGGCTCC +
Preference number: 1 (lower is better)
Translates to: HLPTSCDKGLQPHCT*PHSHSHASPPPAGS
Trigger: GGAGCCTGCAGGCGGTGGAGAAGCATGTGAGTGGGAGTGGGGCCATGTGCAATGAGGCTGAAGACCCTTATCACAGCTGGTGGGAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541998.5
3UTR GCA 90 bp GGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCTCTCTGTaGCTTAGGGTTGCAGAAACATTCCATAGCCTCTGCTGGGACTCC +
Preference number: 1 (lower is better)
Translates to: GTLRGPLRHSGLGSL*LRVAETFHSLCWDS
Trigger: GGAGTCCCAGCAGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR GCA 90 bp TCATTGCACATGGCCCCACTCCCACTCACATGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACC +
Preference number: 1 (lower is better)
Translates to: SLHMAPLPLTCFSTA*RLHSSLSLSWPQCT
Trigger: GGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCATGTGAGTGGGAGTGGGGCCATGTGCAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541998.5
3UTR TCA 90 bp TCATCCACCACGCCCCCGTCGAACACCTTGGCCACCAGCTCATTCTaGTCCAGCAGGAACACAGAGCAGATCTCTGCGTTGCTGAGGTTT +
Preference number: 1 (lower is better)
Translates to: SSTTPPSNTLATSSF*SSRNTEQISALLRF
Trigger: AAACCTCAGCAACGCAGAGATCTGCTCTGTGTTCCTGCTGGATCAGAATGAGCTGGTGGCCAAGGTGTTCGACGGGGGCGTGGTGGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CCA 90 bp AAAAGCAGCAAAGCCGAAGCTGAAACCCAGGTCTGTCCAGCTCCCTaGCCAGGCCATCTTCCCACCAGCTGTGATAAGGGTCTTCAGCCT +
Preference number: 1 (lower is better)
Translates to: KSSKAEAETQVCPAP*PGHLPTSCDKGLQP
Trigger: AGGCTGAAGACCCTTATCACAGCTGGTGGGAAGATGGCCTGGCCAGGGAGCTGGACAGACCTGGGTTTCAGCTTCGGCTTTGCTGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541998.5
3UTR TCA 90 bp TGGCCATGGACGTGTCATCCTCGGGCAGGGAACGAGGGGTATAGGTaGAACTTGCAAAATTGGAGTCAATGGCAGCCACAGGCTGGATCC +
Preference number: 1 (lower is better)
Translates to: WPWTCHPRAGNEGYR*NLQNWSQWQPQAGS
Trigger: GGATCCAGCCTGTGGCTGCCATTGACTCCAATTTTGCAAGTTTCACCTATACCCCTCGTTCCCTGCCCGAGGATGACACGTCCATGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CCA 90 bp GGATCTCATAGCTCTCATCATCCACCACGCCCCCGTCGAACACCTTaGCCACCAGCTCATTCTGATCCAGCAGGAACACAGAGCAGATCT +
Preference number: 1 (lower is better)
Translates to: GSHSSHHPPRPRRTP*PPAHSDPAGTQSRS
Trigger: AGATCTGCTCTGTGTTCCTGCTGGATCAGAATGAGCTGGTGGCCAAGGTGTTCGACGGGGGCGTGGTGGATGATGAGAGCTATGAGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR TCA 90 bp AGATGCCACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATaGGGATCCTGGAGACCCCAAAGGGTGGGAGTCCTCAAAGGGAAA +
Preference number: 1 (lower is better)
Translates to: RCHTLLTQMSHLPLP*GSWRPQRVGVLKGK
Trigger: TTTCCCTTTGAGGACTCCCACCCTTTGGGGTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGTGGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR GCA 90 bp GGACGTGTCATCCTCGGGCAGGGAACGAGGGGTATAGGTGAAACTTaGAAAATTGGAGTCAATGGCAGCCACAGGCTGGATCCCATCATG +
Preference number: 1 (lower is better)
Translates to: GRVILGQGTRGIGET*KIGVNGSHRLDPIM
Trigger: CATGATGGGATCCAGCCTGTGGCTGCCATTGACTCCAATTTTGCAAGTTTCACCTATACCCCTCGTTCCCTGCCCGAGGATGACACGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CCA 90 bp AAGCTGCTCAGACAAAGAATGGCTTGGGAAAGACTTGCCAAGGTGTaGTCAGAGGTGCAGAGTAGGGCCCACTGCTCATTGGTCACCCCT +
Preference number: 1 (lower is better)
Translates to: KLLRQRMAWERLAKV*SEVQSRAHCSLVTP
Trigger: AGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACCACACCTTGGCAAGTCTTTCCCAAGCCATTCTTTGTCTGAGCAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR CCA 90 bp CCCCAAAGGGTGGGAGTCCTCAAAGGGAAAGGAGCAAAGATCTGGTaGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACA +
Preference number: 1 (lower is better)
Translates to: PQRVGVLKGKGAKIW*GRNGARRNHQAAQT
Trigger: TGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAGATCTTTGCTCCTTTCCCTTTGAGGACTCCCACCCTTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR GCA 90 bp GGTCAGAGGTGCAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTaGTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTC +
Preference number: 1 (lower is better)
Translates to: GQRCRVGPTAHWSPL*SQKTNYKVSVRLEV
Trigger: GACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR CCA 90 bp GGGAGTCCTCAAAGGGAAAGGAGCAAAGATCTGGTGGGGCAGAAATaGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTT +
Preference number: 1 (lower is better)
Translates to: GSPQRERSKDLVGQK*GKEKPSSCSDKEWL
Trigger: AAGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAGATCTTTGCTCCTTTCCCTTTGAGGACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR GCA 90 bp GAAAGACTTGCCAAGGTGTGGTCAGAGGTGCAGAGTAGGGCCCACTaGTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTACAAAGT +
Preference number: 1 (lower is better)
Translates to: ERLAKVWSEVQSRAH*SLVTPVLSENKLQS
Trigger: ACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACCACACCTTGGCAAGTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR GCA 90 bp AAAGATCTGGTGGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTaGTCAGACAAAGAATGGCTTGGGAAAGACTTGCCAAGGTGTGGT +
Preference number: 1 (lower is better)
Translates to: KDLVGQKWGKEKPSS*SDKEWLGKDLPRCG
Trigger: ACCACACCTTGGCAAGTCTTTCCCAAGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAGATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR CCA 90 bp GGGACTCCGCAGAGCGATAGAGCTATTTTAGACATTGATCTAAAATaGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCC +
Preference number: 1 (lower is better)
Translates to: GTPQSDRAILDIDLK*ILEHGLSYPLPVWP
Trigger: GGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAAAATAGCTCTATCGCTCTGCGGAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR CCA 90 bp CTTGCAAAATTGGAGTCAATGGCAGCCACAGGCTGGATCCCATCATaGAGAAGTTTGGTATACTCATCATCGGAGACCTTCATGTGGTAC +
Preference number: 1 (lower is better)
Translates to: LAKLESMAATGWIPS*RSLVYSSSETFMWY
Trigger: GTACCACATGAAGGTCTCCGATGATGAGTATACCAAACTTCTCCATGATGGGATCCAGCCTGTGGCTGCCATTGACTCCAATTTTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CAA 90 bp AGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGCGATTTCCCC +
Preference number: 2 (lower is better)
Translates to: RLSAHGCGGGGGSSG*RKTCWPRLWASDFP
Trigger: GGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR-3UTR GCA 90 bp GGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGCCGCGCTGCTGCAGGACCTaGACCCTCCGCAGGGCGACC +
Preference number: 2 (lower is better)
Translates to: GSCGRGRCTPPRPSGLPPRCCRT*TLRRAT
Trigger: GGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG...CGGCGGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
3UTR-3UTR GCA 90 bp GCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCGCTGCTGCAGGACCTaGACCCTCCGCAGGGCGACC +
Preference number: 2 (lower is better)
Translates to: AAAGPAPSAGRPGYASPPRCCRT*TLRRAT
Trigger: GGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG...CGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
3UTR-3UTR GCA 90 bp TGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCTCCCTGGGCCCGCGCTaGTGCAGGACCTGCACCCTC +
Preference number: 2 (lower is better)
Translates to: WRILRSRSVYAAPPFWSSSLGPR*CRTCTL
Trigger: GAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGA...GGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
3UTR-3UTR GCA 90 bp CGCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCTCCCTGGGCCCGCGCTaGTGCAGGACCTGCACCCTC +
Preference number: 2 (lower is better)
Translates to: RCCRTCTLRRATRVCFSTSLGPR*CRTCTL
Trigger: GAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGA...GGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
3UTR-3UTR TCA 90 bp AGTCGGTCGTCTCTACTCCCTGGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCC +
Preference number: 2 (lower is better)
Translates to: SRSSLLPGGPGSFARGSRAARPA*GRPAGP
Trigger: GGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGC...CCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGACCGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR-3UTR GCA 90 bp AGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCCGGGCCTGTCTCCCAGTaGGGGGATCCCTCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: REKPVAGLTQESRPYGVSGPVSQ*GDPSCP
Trigger: TGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCC...GGAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR GCA 90 bp CCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCACTGGGCCCGCGCTGCTaGAGGACCTGCACCCTCCGC +
Preference number: 2 (lower is better)
Translates to: PPPAGSIPHYHSAGHSAPLGPRC*RTCTLR
Trigger: GCGGAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAG...TGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
3UTR-3UTR GCA 90 bp GGATCTGGCCCGTGGTCGCCACGTGTCCCGCGATGCCCTGATCGGCCGGGATGCCAGTGCTGGATCACATaGTCGTCCTCGTCGGTGAAC +
Preference number: 2 (lower is better)
Translates to: GSGPWSPRVPRCPDRPGCQCWIT*SSSSVN
Trigger: GTTCACCGACGAGGACGAGCATGTGATCCAGCACTG...GCATCCCGGCCGATCAGGGCATCGCGGGACACGTGGCGACCACGGGCCAGATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR TCA 90 bp GAAGCCCAGCCCATTGCAGCCCAGCCGCTTCTGGGAGATGATAGCCTCCCGGACCTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: EAQPIAAQPLLGDDSLPDLTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...GTCCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
3UTR-3UTR TCA 90 bp AAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCCTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: KREASGRADPRVPALWGLLTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...GAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR GCA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCTGCGGGGATCCCTCCTaGCCATCAATCCCATCCTGC +
Preference number: 2 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGCGDPS*PSIPSC
Trigger: GCAGGATGGGATTGATGGGCAGGAGGGATCCCCGCA...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR CCA 90 bp CTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCAGCGATTTCCCCTCCTaGATCCTCTGTTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: LSAHGCGGGGGSSGLRKTSDFPS*ILCFFI
Trigger: GATGAAGAAACAGAGGATCCAGGAGGGGAAATCGCT...GGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR-3UTR TCA 90 bp TGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 2 (lower is better)
Translates to: CRTCTLRRATRVCFSTACSTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...GCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543575.5
3UTR-3UTR GCA 90 bp GCGCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 2 (lower is better)
Translates to: ALLQDLHPPQGDQGMLLHCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...GTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
3UTR-3UTR CCA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGCTGGCAGCTTCTTCCTaGGGCCCCTGTATCCCCCAG +
Preference number: 2 (lower is better)
Translates to: EKKREASGRADPRVPALWLAASS*GPCIPQ
Trigger: CTGGGGGATACAGGGGCCCCAGGAAGAAGCTGCCAG...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR TCA 90 bp CTGGTCAGTGGCCCGGCTGATGACAGGGACACAGAGCATGGCCTGCAGCTCACAGTACATCCTCGGAGGTaGGGTCCTTCAGCTGGATGG +
Preference number: 2 (lower is better)
Translates to: LVSGPADDRDTEHGLQLTVHPRR*GPSAGW
Trigger: CCATCCAGCTGAAGGACCTCACCTCCGAGGATGTAC...TGTGAGCTGCAGGCCATGCTCTGTGTCCCTGTCATCAGCCGGGCCACTGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR TCA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATAGGATGGCGATGGCCTaGGCAAAGTGGTGCCTCTCC +
Preference number: 2 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHRMAMA*AKWCLS
Trigger: GGAGAGGCACCACTTTGCTCAGGCCATCGCCATCCT...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CCA 90 bp CCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGGGGCCCACTGCTCATTaGTCACCCCTGTGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: PASHRQEEAWLAHSYLGLGPTAH*SPLCSQ
Trigger: CTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCC...CAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGGGAGACCCCAAAGGGTaGGAGTCCTCAAAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRGDPKG*ESSKGK
Trigger: CTTTCCCTTTGAGGACTCCCACCCTTTGGGGTCTCC...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCAGGCAGGAGGAAGCATaGCTGGCTCATTCATACCTG +
Preference number: 2 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGRQEEA*LAHSYL
Trigger: CAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCT...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR CCA 90 bp AGCTCTCATCATCCACCACGCCCCCGTCGAACACCTTGGCCACCAGCTCATTCTCAGCCCAGCCGCTTCTaGGAGATGATAGCCTCCCGG +
Preference number: 2 (lower is better)
Translates to: SSHHPPRPRRTPWPPAHSQPSRF*EMIASR
Trigger: CCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTG...AGAATGAGCTGGTGGCCAAGGTGTTCGACGGGGGCGTGGTGGATGATGAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR TCA 90 bp GCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: AGTHHPVGRCRQFPLGGALTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...TGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
3UTR-3UTR TCA 90 bp GGCATATGCGTCAGGGATGTTCAGGATCTGGCCCGTGGTCGCCACGTGTCCCGCCGTCATCCAGGTGGGTaGAGAGGTTCTTTGCCACTT +
Preference number: 2 (lower is better)
Translates to: GICVRDVQDLARGRHVSRRHPGG*RGSLPL
Trigger: AAGTGGCAAAGAACCTCTTCACCCACCTGGATGACG...GCGGGACACGTGGCGACCACGGGCCAGATCCTGAACATCCCTGACGCATATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR GCA 90 bp TCATCGGAGACCTTCATGTGGTACATCATCATCTCATTGGCCAGGTGGCTGCGATCCCTGGGCCCGCGCTaGTGCAGGACCTGCACCCTC +
Preference number: 2 (lower is better)
Translates to: SSETFMWYIIISLARWLRSLGPR*CRTCTL
Trigger: GAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGA...TCGCAGCCACCTGGCCAATGAGATGATGATGTACCACATGAAGGTCTCCGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CCA 90 bp AAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCAGACTTGCCAAGGTGTaGTCAGAGGTGCAGAGTAGG +
Preference number: 2 (lower is better)
Translates to: KREASGRADPRVPALWGLRLAKV*SEVQSR
Trigger: CCTACTCTGCACCTCTGACCACACCTTGGCAAGTCT...GAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGAGCAAAGATCTGGTaGGGCAGAAATGGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAGAKIW*GRNGAR
Trigger: CCTTGCCCCATTTCTGCCCCACCAGATCTTTGCTCC...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR CAA 90 bp AAGGCCGTCGCCAGGTCCTCGTCGAACTTGCTGAACCATGGCCCATaGATCTTGTTCACCAGCTCGGCCACACCGATGACCTCCTGGTTC +
Preference number: 2 (lower is better)
Translates to: KAVARSSSNLLNHGP*ILFTSSATPMTSWF
Trigger: GAACCAGGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCTGGCGACGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR TCA 90 bp TCTGAGAAGCCCAGCCCATTGCAGCCCAGCCGCTTCTGGGAGATGATAGCCTCCAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 2 (lower is better)
Translates to: SEKPSPLQPSRFWEMIASSTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...GGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
3UTR-3UTR TCA 90 bp GATGCCCTGATCGGCCGGGATGCGGATCTCATAGCTCTCATCATCCACCACGCCCTGTCAAGGGAAAGCTaGCCTCTTCCCCGAGCACTT +
Preference number: 2 (lower is better)
Translates to: DALIGRDADLIALIIHHALSRES*PLPRAL
Trigger: AAGTGCTCGGGGAAGAGGTCAGCTTTCCCTTGACAG...GGCGTGGTGGATGATGAGAGCTATGAGATCCGCATCCCGGCCGATCAGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR GCA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATAGAGGATGTTGCGCGTaGGGAAGCCGGTGCTGTCGT +
Preference number: 2 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHRGCCA*GSRCCR
Trigger: ACGACAGCACCGGCTTCCGCACGCGCAACATCCTCT...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CAA 90 bp CTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTaGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTC +
Preference number: 2 (lower is better)
Translates to: LRPRGTLRGPLRHSG*GSLCLRVAETFHSL
Trigger: GAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR CAA 90 bp GTCGCCAGGTCCTCGTCGAACTTGCTGAACCATGGCCCATTGATCTaGTTCACCAGCTCGGCCACACCGATGACCTCCTGGTTCTCGTTC +
Preference number: 2 (lower is better)
Translates to: VARSSSNLLNHGPLI*FTSSATPMTSWFSF
Trigger: GAACGAGAACCAGGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCTGGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR TCA 90 bp GGGGGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 2 (lower is better)
Translates to: GGPHTPAGTHHPVGRCRQSTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...CTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
3UTR-3UTR GCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGTGGCTCTGTTCCCAGTaGATCTGGCCAGACCAGTGG +
Preference number: 2 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRWLCSQ*IWPDQW
Trigger: CCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
3UTR-3UTR GCA 90 bp CCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCGGACTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 2 (lower is better)
Translates to: PPAGSIPHYHSAGHSAPDCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...GTCCGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541998.5
ENST00000543575.5
3UTR-3UTR GCA 90 bp CCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGCATTGGCCAGGTGGCTaGGATACTGAGCCTCATTCA +
Preference number: 2 (lower is better)
Translates to: PASHRQEEAWLAHSYLGLHWPGG*DTEPHS
Trigger: TGAATGAGGCTCAGTATCGCAGCCACCTGGCCAATG...CAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CCA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGAGGCAGGAGGAAGCATaGCTGGCTCATTCATACCTG +
Preference number: 2 (lower is better)
Translates to: EKKREASGRADPRVPALWRQEEA*LAHSYL
Trigger: CAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCT...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR CCA 90 bp CTCCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACTCCTCACACACCAGCTaGGACTCACCATCCAGTAGG +
Preference number: 2 (lower is better)
Translates to: LHRLQAPFLIITQLATVHSSHTS*DSPSSR
Trigger: CCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGA...GTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
3UTR-3UTR TCA 90 bp GGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTGCAGAGCACTaGGCTGCCCCTCTGGCAGCT +
Preference number: 2 (lower is better)
Translates to: GQPTGPYTTVAQSPRKTHLSAEH*AAPLAA
Trigger: AGCTGCCAGAGGGGCAGCTCAGTGCTCTGCAGAGAG...ATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR GCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCTGGCTCTGTTCCCAGTaGATCTGGCCAGACCAGTGG +
Preference number: 2 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRWLCSQ*IWPDQW
Trigger: CCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR GCA 90 bp TCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGAACTAAGGACTCAAGATGCCACACTCTaGTCACTCAGATGTCTCACC +
Preference number: 2 (lower is better)
Translates to: SGGLRPAAVSSPPTELRTQDATL*SLRCLT
Trigger: GGTGAGACATCTGAGTGAGCAGAGTGTGGCATCTTG...AGTCCTTAGTTCTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR GCA 90 bp GCAGGGAAGAGGCATCCAGGTCGTAGAGTTCCCCGCACAGTTGGAGGATCTTGCTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 2 (lower is better)
Translates to: AGKRHPGRRVPRTVGGSCCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...GCAAGATCCTCCAACTGTGCGGGGAACTCTACGACCTGGATGCCTCTTCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
3UTR-3UTR GCA 90 bp AGCTCTCATCATCCACCACGCCCCCGTCGAACACCTTGGCCACCAGCTCATTCTTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 2 (lower is better)
Translates to: SSHHPPRPRRTPWPPAHSCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...AGAATGAGCTGGTGGCCAAGGTGTTCGACGGGGGCGTGGTGGATGATGAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR GCA 90 bp CTCCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 2 (lower is better)
Translates to: LHRLQAPFLIITQLATVHCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...GTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
3UTR-3UTR GCA 90 bp TTGATCTTGTTCACCAGCTCGGCCACACCGATGACCTCCTGGTTCTCGTTCTTGCACCAAGATGACAGCTaGCACGGCCCCAGCCTCCTT +
Preference number: 2 (lower is better)
Translates to: LILFTSSATPMTSWFSFLHQDDS*HGPSLL
Trigger: AAGGAGGCTGGGGCCGTGGCAGCTGTCATCTTGGTG...CAAGAACGAGAACCAGGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CCA 90 bp ACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACGGGCCCACTGCTCATTaGTCACCCCTGTGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: TLCSLRCLTFPFHEDPGDGPTAH*SPLCSQ
Trigger: CTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCC...GTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCGGTATCAGGAGCCAGTaGAGCCACCAGCCTGGCCAA +
Preference number: 2 (lower is better)
Translates to: KRISLKATQKGKAGGPPPGIRSQ*SHQPGQ
Trigger: TTGGCCAGGCTGGTGGCTCCACTGGCTCCTGATACC...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CAA 90 bp TGTTGTACATCCTCGGAGGTGAGGTCCTTCAGCTGGATGGACTTCTaGTCTTCCACCACCTGGCCCAGGCATCCTGTCAAGGGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: CCTSSEVRSFSWMDF*SSTTWPRHPVKGKL
Trigger: CAGCTTTCCCTTGACAGGATGCCTGGGCCAGGTGGTGGAAGACAAGAAGTCCATCCAGCTGAAGGACCTCACCTCCGAGGATGTACAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR TCA 90 bp CTCAGAGCTGTAGAGCGCAGCCAGCACAGATTTCGAGGCCACCTGGAAAGAGTTAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 2 (lower is better)
Translates to: LRAVERSQHRFRGHLERVSTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...AACTCTTTCCAGGTGGCCTCGAAATCTGTGCTGGCTGCGCTCTACAGCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR TCA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGCTGTGGTCCAGGTCATaGCACATGCAGGAAATAAAC +
Preference number: 2 (lower is better)
Translates to: EKKREASGRADPRVPALWLWSRS*HMQEIN
Trigger: GTTTATTTCCTGCATGTGTCATGACCTGGACCACAG...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR GCA 90 bp ACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACAGGTGTGGTCAGAGGTaGAGAGTAGGGCCCACTGCT +
Preference number: 2 (lower is better)
Translates to: TLCSLRCLTFPFHEDPGDRCGQR*RVGPTA
Trigger: AGCAGTGGGCCCTACTCTGCACCTCTGACCACACCT...GTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR GCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGGAGAAACCATCAAGCTaGTCAGACAAAGAATGGCTT +
Preference number: 2 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGREKPSS*SDKEWL
Trigger: AAGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTC...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR GCA 90 bp TGTCCAGCTCCCTGGCCAGGCCATCTTCCCACCAGCTGTGATAAGGGTCTTCAGTCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 2 (lower is better)
Translates to: CPAPWPGHLPTSCDKGLQSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...CTGAAGACCCTTATCACAGCTGGTGGGAAGATGGCCTGGCCAGGGAGCTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541998.5
3UTR-3UTR GCA 90 bp AAAGATGTTGCAGCCGTGGGTGTTGAGGATGGCGATGGCCTGAGCAAAGTGGTGTGGAGCACTTTGAGCTaGAGGGAAGAGGCATCCAGG +
Preference number: 2 (lower is better)
Translates to: KDVAAVGVEDGDGLSKVVWSTLS*REEASR
Trigger: CCTGGATGCCTCTTCCCTGCAGCTCAAAGTGCTCCA...CACCACTTTGCTCAGGCCATCGCCATCCTCAACACCCACGGCTGCAACATCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR GCA 90 bp CAGAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGCTCACAGCCCAACATaGTCTGCAGCTGTTGTACAT +
Preference number: 2 (lower is better)
Translates to: QRKREKPVAGLTQESRPYAHSPT*SAAVVH
Trigger: ATGTACAACAGCTGCAGAGCATGTTGGGCTGTGAGC...ATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CCA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCTACCCGCTCCCTGTTTaGCCCAGACAGGGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: KRISLKATQKGKAGGPPPYPLPV*PRQGKR
Trigger: TCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTA...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR CCA 90 bp CCCATTGATCTTGTTCACCAGCTCGGCCACACCGATGACCTCCTGGTTCTCGTTTTGTCTTCCACCACCTaGCCCAGGCATCCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: PIDLVHQLGHTDDLLVLVLSSTT*PRHPVK
Trigger: CTTGACAGGATGCCTGGGCCAGGTGGTGGAAGACAA...AACGAGAACCAGGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CCA 90 bp GCTCCCTGGCCAGGCCATCTTCCCACCAGCTGTGATAAGGGTCTTCAGCCTCATTCATTATCACTCAGCTaGCCACAGTGCACCGGACTT +
Preference number: 2 (lower is better)
Translates to: APWPGHLPTSCDKGLQPHSLSLS*PQCTGL
Trigger: AAGTCCGGTGCACTGTGGCCAGCTGAGTGATAATGA...ATGAGGCTGAAGACCCTTATCACAGCTGGTGGGAAGATGGCCTGGCCAGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541998.5
3UTR-3UTR GCA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTCAGAGTAGGGCCCACTaGTCATTGGTCACCCCTGTG +
Preference number: 2 (lower is better)
Translates to: TQGWALCALGLQKHSIASQSRAH*SLVTPV
Trigger: CACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTG...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR GCA 90 bp CAAAGCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAAGGTGTGGTCAGAGGTaGAGAGTAGGGCCCACTGCT +
Preference number: 2 (lower is better)
Translates to: QSGQPTGPYTTVAQSPRKRCGQR*RVGPTA
Trigger: AGCAGTGGGCCCTACTCTGCACCTCTGACCACACCT...TTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR GCA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAACCCAGGGCCCCTCTCTaGAGAGCACTGAGCTGCCCC +
Preference number: 2 (lower is better)
Translates to: RQLHRVLEKRISLKATQKPRAPL*RALSCP
Trigger: GGGGCAGCTCAGTGCTCTGCAGAGAGGGGCCCTGGG...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR GCA 90 bp TCGTCGAACTTGCTGAACCATGGCCCATTGATCTTGTTCACCAGCTCGGCCACAACATTCCATAGCCTCTaGTGGGACTCCGCAGAGCGA +
Preference number: 2 (lower is better)
Translates to: SSNLLNHGPLILFTSSATTFHSL*WDSAER
Trigger: TCGCTCTGCGGAGTCCCAGCAGAGGCTATGGAATGT...TGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTCGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR GCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGTCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 2 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR GCA 90 bp GGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATGATGCCCGGGTCTCCTaGTGCAGGTATTGGAGCACT +
Preference number: 2 (lower is better)
Translates to: GQPTGPYTTVAQSPRKTHDARVS*CRYWST
Trigger: AGTGCTCCAATACCTGCAGCAGGAGACCCGGGCATC...ATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR GCA 90 bp TTGATCTTGTTCACCAGCTCGGCCACACCGATGACCTCCTGGTTCTCGTTCTTGACACAGAGCATGGCCTaGAGCTCACAGCCCAACATG +
Preference number: 2 (lower is better)
Translates to: LILFTSSATPMTSWFSFLTQSMA*SSQPNM
Trigger: CATGTTGGGCTGTGAGCTGCAGGCCATGCTCTGTGT...CAAGAACGAGAACCAGGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CCA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGTGCTCAGACAAAGAATaGCTTGGGAAAGACTTGCCA +
Preference number: 2 (lower is better)
Translates to: EKKREASGRADPRVPALWCSDKE*LGKDLP
Trigger: TGGCAAGTCTTTCCCAAGCCATTCTTTGTCTGAGCA...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp CCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTACTGGGGCAGCTCATGTaGGGGGTCCTCACACACCAG +
Preference number: 2 (lower is better)
Translates to: PRDHIRQLHRVLEKRISLLGQLM*GVLTHQ
Trigger: CTGGTGTGTGAGGACCCCCCACATGAGCTGCCCCAG...TAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CCA 90 bp CCCATTGATCTTGTTCACCAGCTCGGCCACACCGATGACCTCCTGGTTCTCGTTTCCGTGATGATCTCCTaGAGCAGGACAGAGACGTCA +
Preference number: 2 (lower is better)
Translates to: PIDLVHQLGHTDDLLVLVSVMIS*SRTETS
Trigger: TGACGTCTCTGTCCTGCTCCAGGAGATCATCACGGA...AACGAGAACCAGGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR GCA 90 bp CACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACATCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 2 (lower is better)
Translates to: HHPVGRCRQFPLGGAQLTSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...TGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
3UTR-3UTR GCA 90 bp CTCAGAGCTGTAGAGCGCAGCCAGCACAGATTTCGAGGCCACCTGGAAAGAGTTGGTGAAGAGGTTCTTTaGCACTTGGAGAAGAGCCTG +
Preference number: 2 (lower is better)
Translates to: LRAVERSQHRFRGHLERVGEEVL*HLEKSL
Trigger: CAGGCTCTTCTCCAAGTGGCAAAGAACCTCTTCACC...AACTCTTTCCAGGTGGCCTCGAAATCTGTGCTGGCTGCGCTCTACAGCTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCAAAGGAGCAAAGATCTaGTGGGGCAGAAATGGGGCA +
Preference number: 2 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRKGAKI*WGRNGA
Trigger: TGCCCCATTTCTGCCCCACCAGATCTTTGCTCCTTT...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp CAGTATAGTAGTGGTCCTTCCGGGAGAAATGATCAAAGATGTTGCAGCCGTGGGCACTGGCTGCAGGAATaGGTAAGGGGCTCAGGCCAA +
Preference number: 2 (lower is better)
Translates to: QYSSGPSGRNDQRCCSRGHWLQE*VRGSGQ
Trigger: TTGGCCTGAGCCCCTTACCCATTCCTGCAGCCAGTG...CCCACGGCTGCAACATCTTTGATCATTTCTCCCGGAAGGACCACTACTATACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CAA 90 bp CTTGCCAAGGTGTGGTCAGAGGTGCAGAGTAGGGCCCACTGCTCATaGGTCACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGT +
Preference number: 2 (lower is better)
Translates to: LAKVWSEVQSRAHCS*VTPVLSENKLQSLR
Trigger: ACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACCACACCTTGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR TCA 90 bp CTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGATGTCCGCTAGCGGCATaGCCAGCACTTGGGTATCAG +
Preference number: 2 (lower is better)
Translates to: LKWILEHGLSYPLPVWPRCPLAA*PALGYQ
Trigger: CTGATACCCAAGTGCTGGTCATGCCGCTAGCGGACA...TCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR GCA 90 bp CTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGATGGCTCTGTTCCCAGTaGATCTGGCCAGACCAGTGG +
Preference number: 2 (lower is better)
Translates to: LKWILEHGLSYPLPVWPRWLCSQ*IWPDQW
Trigger: CCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA...TCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR GCA 90 bp GGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTTCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 2 (lower is better)
Translates to: GPHTPAGTHHPVGRCRQFSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...AAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
3UTR-3UTR CCA 90 bp ATCTGGTGGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAGACTTGCCAAGGTGTaGTCAGAGGTGCAGAGTAGG +
Preference number: 2 (lower is better)
Translates to: IWWGRNGARRNHQAAQTKRLAKV*SEVQSR
Trigger: CCTACTCTGCACCTCTGACCACACCTTGGCAAGTCT...CTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCAGACAAAGAATGGCTTaGGAAAGACTTGCCAAGGTG +
Preference number: 2 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRRQRMA*ERLAKV
Trigger: CACCTTGGCAAGTCTTTCCCAAGCCATTCTTTGTCT...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp GTTTCCAAGATGCCACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGAAAGGAGCAAAGATCTaGTGGGGCAGAAATGGGGCA +
Preference number: 2 (lower is better)
Translates to: VSKMPHSAHSDVSPSPSMKGAKI*WGRNGA
Trigger: TGCCCCATTTCTGCCCCACCAGATCTTTGCTCCTTT...CATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGTGGCATCTTGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp CCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTACCCCGTCGAACACCTTaGCCACCAGCTCATTCTGAT +
Preference number: 2 (lower is better)
Translates to: PRDHIRQLHRVLEKRISLPRRTP*PPAHSD
Trigger: ATCAGAATGAGCTGGTGGCCAAGGTGTTCGACGGGG...TAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CCA 90 bp CCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAGGCAGGAGGAAGCATaGCTGGCTCATTCATACCTG +
Preference number: 2 (lower is better)
Translates to: PRDHIRQLHRVLEKRISLRQEEA*LAHSYL
Trigger: CAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCT...TAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR GCA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGACATTCCATAGCCTCTaGTGGGACTCCGCAGAGCGA +
Preference number: 2 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQTFHSL*WDSAER
Trigger: TCGCTCTGCGGAGTCCCAGCAGAGGCTATGGAATGT...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR GCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACACATTCCATAGCCTCTaGTGGGACTCCGCAGAGCGA +
Preference number: 2 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDTFHSL*WDSAER
Trigger: TCGCTCTGCGGAGTCCCAGCAGAGGCTATGGAATGT...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR CAA 90 bp ATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGTaGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAG +
Preference number: 2 (lower is better)
Translates to: ILMYKAVSPRDHIRQ*HRVLEKRISLKATQ
Trigger: CTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR CAA 90 bp TTGGAGTCAATGGCAGCCACAGGCTGGATCCCATCATGGAGAAGTTaGGTATACTCATCATCGGAGACCTTCATGTGGTACATCATCATC +
Preference number: 2 (lower is better)
Translates to: LESMAATGWIPSWRS*VYSSSETFMWYIII
Trigger: GATGATGATGTACCACATGAAGGTCTCCGATGATGAGTATACCAAACTTCTCCATGATGGGATCCAGCCTGTGGCTGCCATTGACTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR GCA 90 bp GGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTCATTGGTCACCCCTGTaGTCTCAGAAAACAAATTAC +
Preference number: 2 (lower is better)
Translates to: GAEMGQGETIKLLRQRMAHWSPL*SQKTNY
Trigger: GTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATG...AGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGCTGGTGGGGCAGAAATaGGGCAAGGAGAAACCATCA +
Preference number: 2 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQLVGQK*GKEKPS
Trigger: TGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAG...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR GCA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAACAAGATGCCACACTCTaGTCACTCAGATGTCTCACC +
Preference number: 2 (lower is better)
Translates to: RQLHRVLEKRISLKATQKQDATL*SLRCLT
Trigger: GGTGAGACATCTGAGTGAGCAGAGTGTGGCATCTTG...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAAAAAGGAGCAAAGATCTaGTGGGGCAGAAATGGGGCA +
Preference number: 2 (lower is better)
Translates to: RQLHRVLEKRISLKATQKKGAKI*WGRNGA
Trigger: TGCCCCATTTCTGCCCCACCAGATCTTTGCTCCTTT...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp GAAAGAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATAAGACTTGCCAAGGTGTaGTCAGAGGTGCAGAGTAGG +
Preference number: 2 (lower is better)
Translates to: ERNRFILMYKAVSPRDHIRLAKV*SEVQSR
Trigger: CCTACTCTGCACCTCTGACCACACCTTGGCAAGTCT...TATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CCA 90 bp GGGACTCCGCAGAGCGATAGAGCTATTTTAGACATTGATCTAAAATGGATCTTAAGGCAGGAGGAAGCATaGCTGGCTCATTCATACCTG +
Preference number: 2 (lower is better)
Translates to: GTPQSDRAILDIDLKWILRQEEA*LAHSYL
Trigger: CAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCT...TAAGATCCATTTTAGATCAATGTCTAAAATAGCTCTATCGCTCTGCGGAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR CCA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAAATGGATCTTAGAGCATaGATTGTCTTACCCGCTCCC +
Preference number: 2 (lower is better)
Translates to: RQLHRVLEKRISLKATQKMDLRA*IVLPAP
Trigger: GGGAGCGGGTAAGACAATCCATGCTCTAAGATCCAT...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR CCA 90 bp GGGACTCCGCAGAGCGATAGAGCTATTTTAGACATTGATCTAAAATGGATCTTAAGTTTCTGTTCCTTCTaGAAGGCCAGGGTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: GTPQSDRAILDIDLKWILSFCSF*KARVLV
Trigger: CACCAGCACCCTGGCCTTCCAGAAGGAACAGAAACT...TAAGATCCATTTTAGATCAATGTCTAAAATAGCTCTATCGCTCTGCGGAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CCA 90 bp CTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGATCGGAGACCTTCATGTaGTACATCATCATCTCATTG +
Preference number: 2 (lower is better)
Translates to: LKWILEHGLSYPLPVWPRSETFM*YIIISL
Trigger: CAATGAGATGATGATGTACCACATGAAGGTCTCCGA...TCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR TCA 72 bp CGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGCG +
Preference number: 3 (lower is better)
Translates to: RMAAAAAAARPA*GRPAGPACGQA
Trigger: CGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR GCA 72 bp TGGACGGCTCGGGGAGCCTCCCTGGGCCCGCGCTGCTaGAGGACCTGCACCCTCCGCAGGGCGACCAGGGTA +
Preference number: 3 (lower is better)
Translates to: WTARGASLGPRC*RTCTLRRATRV
Trigger: TACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGAGGCTCCCCGAGCCGTCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
3UTR GCA 72 bp GGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTaGTGGCCCCGCCTGTGGGCAAGCGATTTCCCCTCC +
Preference number: 3 (lower is better)
Translates to: GGGGGSSGLRKT*WPRLWASDFPS
Trigger: GGAGGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR CCA 72 bp CTGGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGCTaGCTGCAGGCTGTCGGCGCATGGCTGCGGCGGCGG +
Preference number: 3 (lower is better)
Translates to: LGVLAPLQGGPG*LQAVGAWLRRR
Trigger: CCGCCGCCGCAGCCATGCGCCGACAGCCTGCAGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR CCA 72 bp GGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTaGCCCCGCCTGTGGGCAAGCGATTTCCCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: GGGGSSGLRKTC*PRLWASDFPSW
Trigger: CCAGGAGGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR-3UTR CAA 90 bp TCGTCTCTACTCCCTGGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGCTGGCTGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCC +
Preference number: 3 (lower is better)
Translates to: SSLLPGGPGSFARGSRLAGGSSG*RKTCWP
Trigger: GGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCC...AGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR GCA 72 bp CCAGGTCGTAGAGTTCCCCGCACAGTTGGAGGATCTTaGGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCT +
Preference number: 3 (lower is better)
Translates to: PGRRVPRTVGGS*GRGRCTPPRPS
Trigger: AGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTCTACGACCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
3UTR CCA 72 bp GGGCATATGCGTCAGGGATGTTCAGGATCTGGCCCGTaGTCGCCACGTGTCCCGCGATGCCCTGATCGGCCG +
Preference number: 3 (lower is better)
Translates to: GHMRQGCSGSGP*SPRVPRCPDRP
Trigger: CGGCCGATCAGGGCATCGCGGGACACGTGGCGACCACGGGCCAGATCCTGAACATCCCTGACGCATATGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CAA 90 bp CGCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCCACAGTTGGAGGATCTaGCGGTCGCGGTCGGTGTAC +
Preference number: 3 (lower is better)
Translates to: RCCRTCTLRRATRVCFSTHSWRI*RSRSVY
Trigger: GTACACCGACCGCGACCGCAAGATCCTCCAACTGTG...GGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
3UTR GCA 72 bp TCGCCACGTGTCCCGCGATGCCCTGATCGGCCGGGATaGGGATCTCATAGCTCTCATCATCCACCACGCCCC +
Preference number: 3 (lower is better)
Translates to: SPRVPRCPDRPG*GSHSSHHPPRP
Trigger: GGGGCGTGGTGGATGATGAGAGCTATGAGATCCGCATCCCGGCCGATCAGGGCATCGCGGGACACGTGGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR GCA 72 bp TCAGGATCTGGCCCGTGGTCGCCACGTGTCCCGCGATaGCCTGATCGGCCGGGATGCGGATCTCATAGCTCT +
Preference number: 3 (lower is better)
Translates to: SGSGPWSPRVPR*PDRPGCGSHSS
Trigger: AGAGCTATGAGATCCGCATCCCGGCCGATCAGGGCATCGCGGGACACGTGGCGACCACGGGCCAGATCCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR GCA 72 bp TGGGGAAGCAGAGGATGTTGCGCGTGCGGAAGCCGGTaGTGTCGTCCACGCCGCGGTAGAAAAGCGGATGGG +
Preference number: 3 (lower is better)
Translates to: WGSRGCCACGSR*CRPRRGRKADG
Trigger: CCCATCCGCTTTTCTACCGCGGCGTGGACGACAGCACCGGCTTCCGCACGCGCAACATCCTCTGCTTCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR GCA 72 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTaGATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGT +
Preference number: 3 (lower is better)
Translates to: WSRTQDPWLCSQ*IWPDQWRAVGG
Trigger: ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
3UTR GCA 72 bp GTCGTCCACGCCGCGGTAGAAAAGCGGATGGGCATATaGGTCAGGGATGTTCAGGATCTGGCCCGTGGTCGC +
Preference number: 3 (lower is better)
Translates to: VVHAAVEKRMGI*VRDVQDLARGR
Trigger: GCGACCACGGGCCAGATCCTGAACATCCCTGACGCATATGCCCATCCGCTTTTCTACCGCGGCGTGGACGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CCA 72 bp TCTGAGAAGCCCAGCCCATTGCAGCCCAGCCGCTTCTaGGAGATGATAGCCTCCCGGACTTTCCCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: SEKPSPLQPSRF*EMIASRTFPSW
Trigger: CCAGGAGGGGAAAGTCCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
3UTR GCA 72 bp CTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTATCACTCAGCTGGCCA +
Preference number: 3 (lower is better)
Translates to: LRRATRVCFSTA*RLHSSLSLSWP
Trigger: TGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
3UTR GCA 72 bp ATTGTCCTCCGACACCAGCAGGAGGCAGCAGCGGGATaGCCGGGTCTCCTGCTGCAGGTATTGGAGCACTTT +
Preference number: 3 (lower is better)
Translates to: IVLRHQQEAAAG*PGLLLQVLEHF
Trigger: AAAGTGCTCCAATACCTGCAGCAGGAGACCCGGGCATCCCGCTGCTGCCTCCTGCTGGTGTCGGAGGACAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CCA 72 bp TCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTaGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGG +
Preference number: 3 (lower is better)
Translates to: SHRKSWSRTQDP*LCSQCIWPDQW
Trigger: CCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
3UTR CCA 72 bp GAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATaGCTGGCTCATTCATACCTGGGCCTGTCTCCCAGT +
Preference number: 3 (lower is better)
Translates to: ETRPASHRQEEA*LAHSYLGLSPS
Trigger: ACTGGGAGACAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR CAA 90 bp GCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCAGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: AGTHHPVGRCRQFPLGGAADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...TGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
3UTR-3UTR CAA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CAA 90 bp GGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: GTHHPVGRCRQFPLGGAQADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...CTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
3UTR TCA 72 bp ATGTTGCAGCCGTGGGTGTTGAGGATGGCGATGGCCTaGGCAAAGTGGTGCCTCTCCATGACGGAGCCCTCA +
Preference number: 3 (lower is better)
Translates to: MLQPWVLRMAMA*AKWCLSMTEPS
Trigger: TGAGGGCTCCGTCATGGAGAGGCACCACTTTGCTCAGGCCATCGCCATCCTCAACACCCACGGCTGCAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR GCA 72 bp GGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATGACAGAGCCCAGACTC +
Preference number: 3 (lower is better)
Translates to: GSTADRASLTAR*RPEMSMTEPRL
Trigger: GAGTCTGGGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535701.1
3UTR CCA 72 bp ACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTaGCCACAGTGCACCAAGATGACAGCTGCCACGGCC +
Preference number: 3 (lower is better)
Translates to: TACRLHSSLSLS*PQCTKMTAATA
Trigger: GGCCGTGGCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
3UTR-3UTR CAA 90 bp CAGAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATCAGGTGGATATGGCCTaGAAGAGAGAGCCCTGCCAG +
Preference number: 3 (lower is better)
Translates to: QRKREKPVAGLTQESRPYQVDMA*KREPCQ
Trigger: CTGGCAGGGCTCTCTCTTCAAGGCCATATCCACCTG...ATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR CAA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATCAGGTGGATATGGCCTaGAAGAGAGAGCCCTGCCAG +
Preference number: 3 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHQVDMA*KREPCQ
Trigger: CTGGCAGGGCTCTCTCTTCAAGGCCATATCCACCTG...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR GCA 72 bp ATGGCCCCACTCCCACTCACATGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTATCACTCAGCTGGCCA +
Preference number: 3 (lower is better)
Translates to: MAPLPLTCFSTA*RLHSSLSLSWP
Trigger: TGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCATGTGAGTGGGAGTGGGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541998.5
3UTR CCA 72 bp GAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTaGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAG +
Preference number: 3 (lower is better)
Translates to: EGSTCPGSHRKS*SRTQDPWLCSQ
Trigger: CTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
3UTR CCA 72 bp AAAGCCGAAGCTGAAACCCAGGTCTGTCCAGCTCCCTaGCCAGGCCATCTTCCCACCAGCTGTGATAAGGGT +
Preference number: 3 (lower is better)
Translates to: KAEAETQVCPAP*PGHLPTSCDKG
Trigger: ACCCTTATCACAGCTGGTGGGAAGATGGCCTGGCCAGGGAGCTGGACAGACCTGGGTTTCAGCTTCGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541998.5
3UTR CCA 72 bp AGCTGTTGTACATCCTCGGAGGTGAGGTCCTTCAGCTaGATGGACTTCTTGTCTTCCACCACCTGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: SCCTSSEVRSFS*MDFLSSTTWPR
Trigger: CCTGGGCCAGGTGGTGGAAGACAAGAAGTCCATCCAGCTGAAGGACCTCACCTCCGAGGATGTACAACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CCA 72 bp ACCAGCTGTGATAAGGGTCTTCAGCCTCATTGCACATaGCCCCACTCCCACTCACATGCTTCTCCACCGCCT +
Preference number: 3 (lower is better)
Translates to: TSCDKGLQPHCT*PHSHSHASPPP
Trigger: AGGCGGTGGAGAAGCATGTGAGTGGGAGTGGGGCCATGTGCAATGAGGCTGAAGACCCTTATCACAGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541998.5
3UTR-3UTR CAA 90 bp CCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGCAGACAAAGAATGGCTaGGGAAAGACTTGCCAAGGT +
Preference number: 3 (lower is better)
Translates to: PASHRQEEAWLAHSYLGLQTKNG*GKTCQG
Trigger: ACCTTGGCAAGTCTTTCCCAAGCCATTCTTTGTCTG...CAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CAA 90 bp GAGACGTCATCCAGGTGGGTGAAGAGGTTCTTTGCCACTTGGAGAAGAGCCTGGCTCCTGCTGCAGGTATaGGAGCACTTTGAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: ETSSRWVKRFFATWRRAWLLLQV*EHFELQ
Trigger: CTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGAG...CCAGGCTCTTCTCCAAGTGGCAAAGAACCTCTTCACCCACCTGGATGACGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CAA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCGAGGTTCTTTGCCACTaGGAGAAGAGCCTGGCACTC +
Preference number: 3 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKREVLCH*EKSLAL
Trigger: GAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCTC...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR GCA 72 bp GCCAAGGTGTGGTCAGAGGTGCAGAGTAGGGCCCACTaGTCATTGGTCACCCCTGTGCTCTCAGAAAACAAA +
Preference number: 3 (lower is better)
Translates to: AKVWSEVQSRAH*SLVTPVLSENK
Trigger: TTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACCACACCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR GCA 72 bp CTTCCCACCAGCTGTGATAAGGGTCTTCAGCCTCATTaGACATGGCCCCACTCCCACTCACATGCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: LPTSCDKGLQPH*TWPHSHSHASP
Trigger: TGGAGAAGCATGTGAGTGGGAGTGGGGCCATGTGCAATGAGGCTGAAGACCCTTATCACAGCTGGTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541998.5
3UTR-3UTR CAA 90 bp CAGTATAGTAGTGGTCCTTCCGGGAGAAATGATCAAAGATGTTGCAGCCGTGGGCGGCATGACCAGCACTaGGGTATCAGGAGCCAGTGG +
Preference number: 3 (lower is better)
Translates to: QYSSGPSGRNDQRCCSRGRHDQH*GIRSQW
Trigger: CCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCG...CCCACGGCTGCAACATCTTTGATCATTTCTCCCGGAAGGACCACTACTATACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR TCA 72 bp GGGAGAAATGATCAAAGATGTTGCAGCCGTGGGTGTTaGGGATGGCGATGGCCTGAGCAAAGTGGTGCCTCT +
Preference number: 3 (lower is better)
Translates to: GRNDQRCCSRGC*GWRWPEQSGAS
Trigger: AGAGGCACCACTTTGCTCAGGCCATCGCCATCCTCAACACCCACGGCTGCAACATCTTTGATCATTTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CAA 90 bp CCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGGACCATATACGACAGTaGCACAGAGTCCTAGAAAAA +
Preference number: 3 (lower is better)
Translates to: PASHRQEEAWLAHSYLGLDHIRQ*HRVLEK
Trigger: TTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTC...CAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR CAA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATGACCATATACGACAGTaGCACAGAGTCCTAGAAAAA +
Preference number: 3 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHDHIRQ*HRVLEK
Trigger: TTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTC...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR CAA 90 bp TCATCGGAGACCTTCATGTGGTACATCATCATCTCATTGGCCAGGTGGCTGCGACATGCTCTGCAGCTGTaGTACATCCTCGGAGGTGAG +
Preference number: 3 (lower is better)
Translates to: SSETFMWYIIISLARWLRHALQL*YILGGE
Trigger: CTCACCTCCGAGGATGTACAACAGCTGCAGAGCATG...TCGCAGCCACCTGGCCAATGAGATGATGATGTACCACATGAAGGTCTCCGATGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR TCA 72 bp ACGTGTCATCCTCGGGCAGGGAACGAGGGGTATAGGTaGAACTTGCAAAATTGGAGTCAATGGCAGCCACAG +
Preference number: 3 (lower is better)
Translates to: TCHPRAGNEGYR*NLQNWSQWQPQ
Trigger: CTGTGGCTGCCATTGACTCCAATTTTGCAAGTTTCACCTATACCCCTCGTTCCCTGCCCGAGGATGACACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR GCA 72 bp ATCCTCGGGCAGGGAACGAGGGGTATAGGTGAAACTTaGAAAATTGGAGTCAATGGCAGCCACAGGCTGGAT +
Preference number: 3 (lower is better)
Translates to: ILGQGTRGIGET*KIGVNGSHRLD
Trigger: ATCCAGCCTGTGGCTGCCATTGACTCCAATTTTGCAAGTTTCACCTATACCCCTCGTTCCCTGCCCGAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CAA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATAAAGTCTCCGTGAGGTaGGAAGTCTTGCTTCCATTA +
Preference number: 3 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHKVSVR*EVLLPL
Trigger: TAATGGAAGCAAGACTTCCAACCTCACGGAGACTTT...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CAA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCATCTTAGAGCATGGATaGTCTTACCCGCTCCCTGTT +
Preference number: 3 (lower is better)
Translates to: KRISLKATQKGKAGGPPPILEHG*SYPLPV
Trigger: AACAGGGAGCGGGTAAGACAATCCATGCTCTAAGAT...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR CAA 90 bp TCATCGGAGACCTTCATGTGGTACATCATCATCTCATTGGCCAGGTGGCTGCGACTCTGTGCCTTAGGGTaGCAGAAACATTCCATAGCC +
Preference number: 3 (lower is better)
Translates to: SSETFMWYIIISLARWLRLCALG*QKHSIA
Trigger: GGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAG...TCGCAGCCACCTGGCCAATGAGATGATGATGTACCACATGAAGGTCTCCGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CAA 90 bp CTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACATGGCCCATTGATCTaGTTCACCAGCTCGGCCACA +
Preference number: 3 (lower is better)
Translates to: LKWILEHGLSYPLPVWPRHGPLI*FTSSAT
Trigger: TGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATG...TCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR GCA 72 bp TGCAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTaGTCTCAGAAAACAAATTACAAAGTCTCCGTGAGG +
Preference number: 3 (lower is better)
Translates to: CRVGPTAHWSPL*SQKTNYKVSVR
Trigger: CCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR-3UTR CAA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGCTGGATGGACTTCTaGTCTTCCACCACCTGGCCC +
Preference number: 3 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDSWMDF*SSTTWP
Trigger: GGGCCAGGTGGTGGAAGACAAGAAGTCCATCCAGCT...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR TCA 72 bp ACAAGGCAAAGATCTCGATGTCCTCGAGGTAGTTGGTaGGCTCCAGGTTCTTGTAGAGCAGGTAGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: TRQRSRCPRGSW*APGSCRAGSRS
Trigger: ACTTCTGCTACCTGCTCTACAAGAACCTGGAGCTCACCAACTACCTCGAGGACATCGAGATCTTTGCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CCA 72 bp CAAAGGGAAAGGAGCAAAGATCTGGTGGGGCAGAAATaGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAA +
Preference number: 3 (lower is better)
Translates to: QRERSKDLVGQK*GKEKPSSCSDK
Trigger: TTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAGATCTTTGCTCCTTTCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR CCA 72 bp CATCGGAGACCTTCATGTGGTACATCATCATCTCATTaGCCAGGTGGCTGCGATACTGAGCCTCATTCACTT +
Preference number: 3 (lower is better)
Translates to: HRRPSCGTSSSH*PGGCDTEPHSL
Trigger: AAGTGAATGAGGCTCAGTATCGCAGCCACCTGGCCAATGAGATGATGATGTACCACATGAAGGTCTCCGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CCA 72 bp TTGGAGTCAATGGCAGCCACAGGCTGGATCCCATCATaGAGAAGTTTGGTATACTCATCATCGGAGACCTTC +
Preference number: 3 (lower is better)
Translates to: LESMAATGWIPS*RSLVYSSSETF
Trigger: GAAGGTCTCCGATGATGAGTATACCAAACTTCTCCATGATGGGATCCAGCCTGTGGCTGCCATTGACTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CAA 90 bp CTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACTCTGTGCCTTAGGGTaGCAGAAACATTCCATAGCC +
Preference number: 3 (lower is better)
Translates to: LKWILEHGLSYPLPVWPRLCALG*QKHSIA
Trigger: GGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAG...TCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR-3UTR CAA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAACAAGAAAGCTGGAGATaGTCCTCCGACACCAGCAGG +
Preference number: 3 (lower is better)
Translates to: RQLHRVLEKRISLKATQKQESWR*SSDTSR
Trigger: CCTGCTGGTGTCGGAGGACAATCTCCAGCTTTCTTG...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR-3UTR CAA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGAGGTCCTCGTCGAACTaGCTGAACCATGGCCCATTG +
Preference number: 3 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQRSSSN*LNHGPL
Trigger: CAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCT...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR TCA 72 bp CCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTaGGGTTGGAAGTCTTGCTTCCATTATACAGACGAG +
Preference number: 3 (lower is better)
Translates to: PCALRKQITKSP*GWKSCFHYTDE
Trigger: CTCGTCTGTATAATGGAAGCAAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
3UTR-3UTR CAA 90 bp GGGACTCCGCAGAGCGATAGAGCTATTTTAGACATTGATCTAAAATGGATCTTAGACCATATACGACAGTaGCACAGAGTCCTAGAAAAA +
Preference number: 3 (lower is better)
Translates to: GTPQSDRAILDIDLKWILDHIRQ*HRVLEK
Trigger: TTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTC...TAAGATCCATTTTAGATCAATGTCTAAAATAGCTCTATCGCTCTGCGGAGTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GTCCAGGCTGGCTGCAGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGCGCTGCCACTGCCTCTaGTGCTCGGCTGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VQAGCRLSAHGCGGGGGSRCHCL*CSAGSG
Trigger: CCCAGAGCCAGCCGAGCAGCAGAGGCAGTGGCAGCG...CGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCTGCAGCCAGCCTGGAC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR CAA 72 bp GCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: AHGCGGGGGSSG*RKTCWPRLWAS
Trigger: GCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp GGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTGGCCCCGCCTGTGGCTCTCCCGCTGCCACTaGCTCTGCTGCTCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGGGGSSGLRKTCWPRLWLSRCH*LCCSAG
Trigger: GCCAGCCGAGCAGCAGAGGCAGTGGCAGCGGGAGAG...CCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp CATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTGGCCCGGGGTCCAGGCTGGCTaGAGGCTGTCGGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: HGCGGGGGSSGLRKTCWPGVQAG*RLSAHG
Trigger: GCCATGCGCCGACAGCCTGCAGCCAGCCTGGACCCC...GGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR CCA 90 bp CGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTGGCCCCGCCTGTGGGCCAAGGGGGTCCAGGCTaGCTGCAGGCTGTCGGCGCA +
Preference number: 4 (lower is better)
Translates to: RRRRLVRLEEDLLAPPVGQGGPG*LQAVGA
Trigger: TGCGCCGACAGCCTGCAGCCAGCCTGGACCCCCTTG...GCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp GGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTGCTCAGCCGGTCGCGCTaGCGGGTACTGCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GAWLRRRRRLVRLEEDLLLSRSR*RVLLAP
Trigger: AGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAG...CAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR CCA 90 bp GTCCAGGCTGGCTGCAGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTTGAGGAAGACCTGCTaGCCCCGCCTGTGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: VQAGCRLSAHGCGGGGGSLRKTC*PRLWAS
Trigger: GCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAA...CGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCTGCAGCCAGCCTGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR CCA 90 bp CGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTGGCCCCGCCTGTGGGCGCTGCCGGGTACTGCTaGCTCCTGCAGAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RRRRLVRLEEDLLAPPVGAAGYC*LLQRME
Trigger: CTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGC...GCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR CCA 90 bp CGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTGGCCCCGCCTGTGGGCCCTCTGCTGCTCGGCTaGCTCTGGGAGGAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: RRRRLVRLEEDLLAPPVGPLLLG*LWEEVG
Trigger: TCCAACCTCCTCCCAGAGCCAGCCGAGCAGCAGAGG...GCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp GGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTGGCCCCGCCTGTGGGCAGGTACTGCTGGCTCCTaGAGAGGATGGAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GGGGSSGLRKTCWPRLWAGTAGS*RGWSGR
Trigger: GCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACC...TGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp AGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGCCCGCTGCTGCAGGACCTaGACCCTCCGCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: RILRSRSVYAAPPFWSSARCCRT*TLRRAT
Trigger: GGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG...GGCGGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR GCA 90 bp TGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCCTGGGCCCGCGCTGCTaGAGGACCTGCACCCTCCGC +
Preference number: 4 (lower is better)
Translates to: CRTCTLRRATRVCFSTACLGPRC*RTCTLR
Trigger: GCGGAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAG...GCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR GCA 90 bp GACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGCTCTGGGCCCGCGCTGCTaGAGGACCTGCACCCTCCGC +
Preference number: 4 (lower is better)
Translates to: DLHPPQGDQGMLLHRLQALGPRC*RTCTLR
Trigger: GCGGAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAG...AGCCTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR GCA 90 bp CAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGCAGCACCAGGACCATaGTCGCAGCCGCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: QDLHPPQGDQGMLLHRLQAAPGP*SQPPAR
Trigger: GCGGGCGGGCGGCTGCGAGCATGGTCCTGGTGCTGC...CTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR GCA 90 bp CTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCGCAGCACCAGGACCATaGTCGCAGCCGCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: LLQDLHPPQGDQGMLLHRAAPGP*SQPPAR
Trigger: GCGGGCGGGCGGCTGCGAGCATGGTCCTGGTGCTGC...GCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR CCA 90 bp GGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTGGCCCCGCGCCCCCTACTCAGCCTaGACTCAACACCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: GCGGGGGSSGLRKTCWPRAPYSA*TQHPNP
Trigger: TGGATTGGGGTGTTGAGTCCAGGCTGAGTAGGGGGC...GCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR CCA 90 bp TGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTGGCCCCGGTCGTCTCTACTCCCTaGGGGTCCTGGCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: WLRRRRRLVRLEEDLLAPVVSTP*GSWLLC
Trigger: GCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGAC...CGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR TCA 90 bp CGCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RCCRTCTLRRATRVCFSTAARPA*GRPAGP
Trigger: GGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGC...GGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR GCA 90 bp CAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGCGCTGCTGCAGGACCTaGACCCTCCGCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: QDLHPPQGDQGMLLHRLQRCCRT*TLRRAT
Trigger: GGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG...CTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR GCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCTGGGCCCGCGCTGCTaGAGGACCTGCACCCTCCGC +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVALGPRC*RTCTLR
Trigger: GCGGAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CGCACAGTTGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTTCCCTGGGCCCGCGCTaGTGCAGGACCTGCACCCTC +
Preference number: 4 (lower is better)
Translates to: RTVGGSCGRGRCTPPRPSSLGPR*CRTCTL
Trigger: GAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGA...AGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCAACTGTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR GCA 90 bp TCCCCGCACAGTTGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCGGGTCCTGGCTCCTTTaGAAGGGGGTCCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPHSWRILRSRSVYAAPPGSWLL*KGVQAG
Trigger: GCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCC...GGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCAACTGTGCGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp CCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PRTRGSVPSASGQTSGGLAARPA*GRPAGP
Trigger: GGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGC...CAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp TTGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCAGCCAGTGGCCGGGCTaGCCCAAGAGTCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: LEDLAVAVGVRRPALLVFSQWPG*PKSPGP
Trigger: AGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCT...GAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTCTGCTGCCCCGCTaGTCCCGCCTCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRALLPR*SRLSRC
Trigger: GCAGCGGGAGAGGCGGGAGCAGCGGGGCAGCAGAGC...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR GCA 90 bp AGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGCGATTTCCCCTCCTGGATCCTCGCTCTGCTGCCCCGCTaGTCCCGCCTCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RKTCWPRLWASDFPSWILALLPR*SRLSRC
Trigger: GCAGCGGGAGAGGCGGGAGCAGCGGGGCAGCAGAGC...GAGGATCCAGGAGGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGCTGGGCCCGCGCTGCTaGAGGACCTGCACCCTCCGC +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRLGPRC*RTCTLR
Trigger: GCGGAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAG...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGCTCCCAGGGCCCCTCTCTaGAGAGCACTGAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DLHPPQGDQGMLLHRLQAPRAPL*RALSCP
Trigger: GGGGCAGCTCAGTGCTCTGCAGAGAGGGGCCCTGGG...AGCCTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp TCGTCCGGCTTGAGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGCGATTTCCCCTCGCCCTGTCCCCGCTaGCTGGAGTTCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSGLRKTCWPRLWASDFPSPCPR*LEFRAG
Trigger: CCCTGCCCTGAACTCCAGGCAGCGGGGACAGGGCGA...GGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCGCTGCTGCAGGACCTaGACCCTCCGCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWRCCRT*TLRRAT
Trigger: GGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGCTGGGCCCGCGCTGCTaGAGGACCTGCACCCTCCGC +
Preference number: 4 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQLGPRC*RTCTLR
Trigger: GCGGAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAG...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGTCCCTGGGCCCGCGCTaGTGCAGGACCTGCACCCTC +
Preference number: 4 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRSLGPR*CRTCTL
Trigger: GAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGA...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGATCCCTGGGCCCGCGCTaGTGCAGGACCTGCACCCTC +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGSLGPR*CRTCTL
Trigger: GAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGA...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGCGTGCGGAAGCCGGTaGTGTCGTCCACGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPACGSR*CRPRRG
Trigger: ACCGCGGCGTGGACGACAGCACCGGCTTCCGCACGC...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGCGTGCGGAAGCCGGTaGTGTCGTCCACGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGACGSR*CRPRRG
Trigger: ACCGCGGCGTGGACGACAGCACCGGCTTCCGCACGC...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGGGGGTCCAGGCTGGCTaGAGGCTGTCGGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWGVQAG*RLSAHG
Trigger: GCCATGCGCCGACAGCCTGCAGCCAGCCTGGACCCC...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000444035.6
CDS-3UTR CCA 90 bp CTACTCCCTGGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGCTGGCTGCAGGCCCAGCCAGACTAAGGTaGCACCTCGCCCTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LLPGGPGSFARGSRLAAGPARLR*HLALSP
Trigger: CGGGGACAGGGCGAGGTGCCACCTTAGTCTGGCTGG...GCCTGCAGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR CCA 90 bp GCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAAGAGTCCCGGCCCTATaGGGTCTCCCAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AGPAPSAGRPGYASPPPARVPAL*GLPSPR
Trigger: CCTGGGGCTTGGGAGACCCCATAGGGCCGGGACTCT...TGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp GCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AAAGPAPSAGRPGYASPPLTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...CGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
CDS-3UTR TCA 90 bp GCGCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ALLQDLHPPQGDQGMLLHLTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...GTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
CDS-3UTR TCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGATGTCCCGCGATGCCCTaGTCGGCCGGGATGCGGATC +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGCPAMP*SAGMRI
Trigger: GATCCGCATCCCGGCCGATCAGGGCATCGCGGGACA...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGTGTCCCGCGATGCCCTaGTCGGCCGGGATGCGGATC +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVCPAMP*SAGMRI
Trigger: GATCCGCATCCCGGCCGATCAGGGCATCGCGGGACA...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCCTGCTGGCCCCGCCTaGGGAATTGGACAACAGCGA +
Preference number: 4 (lower is better)
Translates to: LQDLHPPQGDQGMLLHRLPAGPA*GIGQQR
Trigger: TCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGG...CAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR TCA 90 bp CAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGCCTGCTGGCCCCGCCTaGGGAATTGGACAACAGCGA +
Preference number: 4 (lower is better)
Translates to: QDLHPPQGDQGMLLHRLQPAGPA*GIGQQR
Trigger: TCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGG...CTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR TCA 90 bp CGCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCCCTGCTGGCCCCGCCTaGGGAATTGGACAACAGCGA +
Preference number: 4 (lower is better)
Translates to: RCCRTCTLRRATRVCFSTPAGPA*GIGQQR
Trigger: TCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGG...GGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR TCA 90 bp TGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCCCTGCTGGCCCCGCCTaGGGAATTGGACAACAGCGA +
Preference number: 4 (lower is better)
Translates to: CRTCTLRRATRVCFSTACPAGPA*GIGQQR
Trigger: TCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGG...GCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR GCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTTCGCCCTGTCCCCGCTaGCTGGAGTTCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGSPCPR*LEFRAG
Trigger: CCCTGCCCTGAACTCCAGGCAGCGGGGACAGGGCGA...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR GCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCGCTGCTGCAGGACCTaGACCCTCCGCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDRCCRT*TLRRAT
Trigger: GGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GCTAGCGGCATGACCAGCACTTGGGTATCAGGAGCCAGTGGAGCCACCAGCCTGCGCTGCTGCAGGACCTaGACCCTCCGCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: ASGMTSTWVSGASGATSLRCCRT*TLRRAT
Trigger: GGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG...CAGGCTGGTGGCTCCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCGCTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp GGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGCCGACAGTTGGAGGATCTTaGGGTCGCGGTCGGTGTACG +
Preference number: 4 (lower is better)
Translates to: GSCGRGRCTPPRPSGLPPTVGGS*GRGRCT
Trigger: CGTACACCGACCGCGACCGCAAGATCCTCCAACTGT...CGGCGGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR GCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGAGGCAGCAGCGGGATaGCCGGGTCTCCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWEEAAAG*PGLLLQ
Trigger: CTGCAGCAGGAGACCCGGGCATCCCGCTGCTGCCTC...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGAGGCAGCAGCGGGATaGCCGGGTCTCCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRAEAAAG*PGLLLQ
Trigger: CTGCAGCAGGAGACCCGGGCATCCCGCTGCTGCCTC...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGCGTGCGGAAGCCGGTaGTGTCGTCCACGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSACGSR*CRPRRG
Trigger: ACCGCGGCGTGGACGACAGCACCGGCTTCCGCACGC...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGGGAAGCAGAGGATGTTaGGCGTGCGGAAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: AAAGPAPSAGRPGYASPPGSRGC*ACGSRC
Trigger: GCACCGGCTTCCGCACGCGCAACATCCTCTGCTTCC...CGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp CCATTGCAGCCCAGCCGCTTCTGGGAGATGATAGCCTCCCGGACTTTCCCCTCCGGGGTCCAGGCTGGCTaGAGGCTGTCGGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: PLQPSRFWEMIASRTFPSGVQAG*RLSAHG
Trigger: GCCATGCGCCGACAGCCTGCAGCCAGCCTGGACCCC...GGAGGGGAAAGTCCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp TCGTCCGGCTTGAGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGCGATTTCCCCGGCTTGAGGAAGACCTaGTGGCCCCGCCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SSGLRKTCWPRLWASDFPGLRKT*WPRLWA
Trigger: TGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCC...GGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR CCA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTCCTGTCCCCGCTGCCTaGAGTTCAGGGCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRAPVPAA*SSGQGT
Trigger: GGTGCCCTGCCCTGAACTCCAGGCAGCGGGGACAGG...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR CCA 90 bp CGCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCCTGGGGCAGCTCATGTaGGGGGTCCTCACACACCAG +
Preference number: 4 (lower is better)
Translates to: RCCRTCTLRRATRVCFSTLGQLM*GVLTHQ
Trigger: CTGGTGTGTGAGGACCCCCCACATGAGCTGCCCCAG...GGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
CDS-3UTR CCA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCTCAGGATCTGGCCCGTaGTCGCCACGTGTCCCGCGA +
Preference number: 4 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGSGSGP*SPRVPR
Trigger: TCGCGGGACACGTGGCGACCACGGGCCAGATCCTGA...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGCCGTTGAGGAAGACCTGCTaGCCCCGCCTGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: GSCGRGRCTPPRPSGLPPLRKTC*PRLRNW
Trigger: CCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAA...CGGCGGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR CCA 90 bp CAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGACTCCCTGGGGGTCCTaGCTCCTTTGCAAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: QDLHPPQGDQGMLLHRLQTPWGS*LLCKGV
Trigger: GACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGT...CTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543575.5
CDS-3UTR TCA 90 bp CCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCCACAGTGCACCAAGATaGCAGCTGCCACGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLPVWPRQGKRLAQRHTGHSAPR*QLPRPQ
Trigger: CTGGGGCCGTGGCAGCTGTCATCTTGGTGCACTGTG...GCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp TGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCAGGATGGCGATGGCCTaGGCAAAGTGGTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: WRILRSRSVYAAPPFWSSRMAMA*AKWCLS
Trigger: GGAGAGGCACCACTTTGCTCAGGCCATCGCCATCCT...GGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCGGAGGCCGCGGATGGTaGACTTGTGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAGGRGW*TCGTPW
Trigger: CCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCC...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCCTCTCTGCAGAGCACTaGGCTGCCCCTCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PLPVWPRQGKRLAQRHTGLSAEH*AAPLAA
Trigger: AGCTGCCAGAGGGGCAGCTCAGTGCTCTGCAGAGAG...GCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGAGCCCTGCCAGGGCTaGGGCCAGGTCTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSEPCQG*GQVSHW
Trigger: CCAGTGAGAGACCTGGCCTCAGCCCTGGCAGGGCTC...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGAGCCAGTGGCCGGGCTaGCCCAAGAGTCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: EKKREASGRADPRVPALWSQWPG*PKSPGP
Trigger: AGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCT...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTAGCCAGTGGCCGGGCTaGCCCAAGAGTCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRSQWPG*PKSPGP
Trigger: AGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCT...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTTCGCCCTGTCCCCGCTaGCTGGAGTTCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMASPCPR*LEFRAG
Trigger: CCCTGCCCTGAACTCCAGGCAGCGGGGACAGGGCGA...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334456.10
CDS-3UTR GCA 90 bp CCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGAAGCCCAGCCCATTaGAGCCCAGCCGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PLPVWPRQGKRLAQRHTGRSPAH*SPAASG
Trigger: CCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCT...GCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp TGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCCACCAAGATGACAGCTaGCACGGCCCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: CRTCTLRRATRVCFSTACHQDDS*HGPSLL
Trigger: AAGGAGGCTGGGGCCGTGGCAGCTGTCATCTTGGTG...GCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR GCA 90 bp CCAGGTCCCAATCCCACCATCAGTATAGTAGTGGTCCTCAGGGGGCCTTCGCCCTCCCTGGGCCCGCGCTaGTGCAGGACCTGCACCCTC +
Preference number: 4 (lower is better)
Translates to: PGPNPTISIVVVLRGPSPSLGPR*CRTCTL
Trigger: GAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGA...GGGCGAAGGCCCCCTGAGGACCACTACTATACTGATGGTGGGATTGGGACCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR GCA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGGAGGCAGCAGCGGGATaGCCGGGTCTCCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQEAAAG*PGLLLQ
Trigger: CTGCAGCAGGAGACCCGGGCATCCCGCTGCTGCCTC...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGAGGCAGCAGCGGGATaGCCGGGTCTCCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSEAAAG*PGLLLQ
Trigger: CTGCAGCAGGAGACCCGGGCATCCCGCTGCTGCCTC...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCGGAAGCAGAGGATGTTaGGCGTGCGGAAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAGSRGC*ACGSRC
Trigger: GCACCGGCTTCCGCACGCGCAACATCCTCTGCTTCC...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CGCACAGTTGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTTGCGGGGATCCCTCCTaGCCATCAATCCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: RTVGGSCGRGRCTPPRPSCGDPS*PSIPSC
Trigger: GCAGGATGGGATTGATGGGCAGGAGGGATCCCCGCA...AGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCAACTGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp GCTAGCGGCATGACCAGCACTTGGGTATCAGGAGCCAGTGGAGCCACCAGCCTGGGGCCTGTCTCCCAGTaGGGGGATCCCTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ASGMTSTWVSGASGATSLGPVSQ*GDPSCP
Trigger: TGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCC...CAGGCTGGTGGCTCCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCGCTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp CGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCGGACTGCAGCACCAGGACCATaGTCGCAGCCGCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: RLQAPFLIITQLATVHRTAAPGP*SQPPAR
Trigger: GCGGGCGGGCGGCTGCGAGCATGGTCCTGGTGCTGC...AGTCCGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541998.5
ENST00000543575.5
CDS-3UTR GCA 90 bp CCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCAGCAGCACCAGGACCATaGTCGCAGCCGCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: PPPAGSIPHYHSAGHSAPAAPGP*SQPPAR
Trigger: GCGGGCGGGCGGCTGCGAGCATGGTCCTGGTGCTGC...TGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR GCA 90 bp CGCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGGCTTGAGGAAGACCTaGTGGCCCCGCCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: RCCRTCTLRRATRVCFSTGLRKT*WPRLRN
Trigger: ATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCC...GGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR GCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGCTCAGCTGGCCACAGTaGACCTGCAGGCTGTCGGCG +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRLSWPQ*TCRLSA
Trigger: CGCCGACAGCCTGCAGGTGCACTGTGGCCAGCTGAG...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418754.6
CDS-3UTR GCA 90 bp AGTCGGTCGTCTCTACTCCCTGGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGGGGTCCTGGCTCCTTTaGAAGGGGGTCCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRSSLLPGGPGSFARGSRGSWLL*KGVQAG
Trigger: GCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCC...CCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGACCGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCGGCTTGAGGAAGACCTaGTGGCCCCGCCTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGGLRKT*WPRLWA
Trigger: TGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCC...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540345.5
CDS-3UTR CCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTCCAGCCAGACTAAGGTaGCACCTCGCCCTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGPARLR*HLALSP
Trigger: CGGGGACAGGGCGAGGTGCCACCTTAGTCTGGCTGG...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR CCA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCCTGGGGCAGCTCATGTaGGGGGTCCTCACACACCAG +
Preference number: 4 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGLGQLM*GVLTHQ
Trigger: CTGGTGTGTGAGGACCCCCCACATGAGCTGCCCCAG...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCCAGCCCAGCCGCTTCTaGGAGATGATAGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PLPVWPRQGKRLAQRHTGQPSRF*EMIASR
Trigger: CCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTG...GCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCAGCCCAGCCGCTTCTaGGAGATGATAGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAQPSRF*EMIASR
Trigger: CCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGTATCAGGAGCCAGTaGAGCCACCAGCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: AGPAPSAGRPGYASPPPAGIRSQ*SHQPGQ
Trigger: TTGGCCAGGCTGGTGGCTCCACTGGCTCCTGATACC...TGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR CCA 90 bp GACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGCTGGTATCAGGAGCCAGTaGAGCCACCAGCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: DLHPPQGDQGMLLHRLQAGIRSQ*SHQPGQ
Trigger: TTGGCCAGGCTGGTGGCTCCACTGGCTCCTGATACC...AGCCTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR CCA 90 bp GACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGCTAGTTCCCCGCACAGTTaGAGGATCTTGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: DLHPPQGDQGMLLHRLQASSPHS*RILRSR
Trigger: CCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACT...AGCCTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR CCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCTCAGGATCTGGCCCGTaGTCGCCACGTGTCCCGCGA +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGSGSGP*SPRVPR
Trigger: TCGCGGGACACGTGGCGACCACGGGCCAGATCCTGA...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGTCAGGATCTGGCCCGTaGTCGCCACGTGTCCCGCGA +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWESGSGP*SPRVPR
Trigger: TCGCGGGACACGTGGCGACCACGGGCCAGATCCTGA...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGTCAGGATCTGGCCCGTaGTCGCCACGTGTCCCGCGA +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVSGSGP*SPRVPR
Trigger: TCGCGGGACACGTGGCGACCACGGGCCAGATCCTGA...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCCTGGCAGCTTCTTCCTaGGGCCCCTGTATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGLAASS*GPCIPQ
Trigger: CTGGGGGATACAGGGGCCCCAGGAAGAAGCTGCCAG...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp TTGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCTGGCAGCTTCTTCCTaGGGCCCCTGTATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LEDLAVAVGVRRPALLVFLAASS*GPCIPQ
Trigger: CTGGGGGATACAGGGGCCCCAGGAAGAAGCTGCCAG...GAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGAGAGTCCCGGCCCTATaGGGTCTCCCAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWRVPAL*GLPSPR
Trigger: CCTGGGGCTTGGGAGACCCCATAGGGCCGGGACTCT...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CGGCTCGTCCGGCTTGAGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGCGATTTACTCCCTGGGGGTCCTaGCTCCTTTGCAAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RLVRLEEDLLAPPVGKRFTPWGS*LLCKGV
Trigger: GACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGT...AAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR CCA 90 bp TCGTCCGGCTTGAGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGCGATTTCCCCCTGCTCGGCTGGCTCTaGGAGGAGGTTGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSGLRKTCWPRLWASDFPLLGWL*EEVGAG
Trigger: ACCTGCTCCAACCTCCTCCCAGAGCCAGCCGAGCAG...GGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR CCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTTGAGGAAGACCTGCTaGCCCCGCCTGTGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVALRKTC*PRLWAS
Trigger: GCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAA...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540345.5
CDS-3UTR TCA 90 bp AGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGCCGGCCTGAAATGTCGATaGCAGAGCCCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: RILRSRSVYAAPPFWSSAGLKCR*QSPDSA
Trigger: TGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCC...GGCGGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR TCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGLTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWLTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp GCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTTGTCCGCTAGCGGCATaGCCAGCACTTGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: AAGPAPSAGRPGYASPPPCPLAA*PALGYQ
Trigger: CTGATACCCAAGTGCTGGTCATGCCGCTAGCGGACA...AGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR TCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCACAGTGCACCAAGATaGCAGCTGCCACGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWHSAPR*QLPRPQ
Trigger: CTGGGGCCGTGGCAGCTGTCATCTTGGTGCACTGTG...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp AAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCAGGCCAGGGTGCTGGTaGGCACGGTGCTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: KREASGRADPRVPALWGLRPGCW*ARCWCS
Trigger: ACTACACCAGCACCGTGCTCACCAGCACCCTGGCCT...GAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTAGGCCAGGGTGCTGGTaGGCACGGTGCTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPRPGCW*ARCWCS
Trigger: ACTACACCAGCACCGTGCTCACCAGCACCCTGGCCT...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGAGGCCAGGGTGCTGGTaGGCACGGTGCTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVRPGCW*ARCWCS
Trigger: ACTACACCAGCACCGTGCTCACCAGCACCCTGGCCT...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp TCCCCGCACAGTTGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCCGTCATCCAGGTGGGTaGAGAGGTTCTTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: SPHSWRILRSRSVYAAPPRHPGG*RGSLPL
Trigger: AAGTGGCAAAGAACCTCTTCACCCACCTGGATGACG...GGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCAACTGTGCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp TCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGAACTAAGGACTTGTCCCGCGATGCCCTaGTCGGCCGGGATGCGGATC +
Preference number: 4 (lower is better)
Translates to: SGGLRPAAVSSPPTELRTCPAMP*SAGMRI
Trigger: GATCCGCATCCCGGCCGATCAGGGCATCGCGGGACA...AGTCCTTAGTTCTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATTGTCCCGCGATGCCCTaGTCGGCCGGGATGCGGATC +
Preference number: 4 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHCPAMP*SAGMRI
Trigger: GATCCGCATCCCGGCCGATCAGGGCATCGCGGGACA...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCAGGATGGCGATGGCCTaGGCAAAGTGGTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVARMAMA*AKWCLS
Trigger: GGAGAGGCACCACTTTGCTCAGGCCATCGCCATCCT...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCGGAGGCCGCGGATGGTaGACTTGTGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGGGRGW*TCGTPW
Trigger: CCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCC...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CCAGGTCCCAATCCCACCATCAGTATAGTAGTGGTCCTCAGGGGGCCTTCGCCCGAGCCCTGCCAGGGCTaGGGCCAGGTCTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: PGPNPTISIVVVLRGPSPEPCQG*GQVSHW
Trigger: CCAGTGAGAGACCTGGCCTCAGCCCTGGCAGGGCTC...GGGCGAAGGCCCCCTGAGGACCACTACTATACTGATGGTGGGATTGGGACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp GTGTGGTCAGAGGTGCAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTGCTCGAGCCCTGCCAGGGCTaGGGCCAGGTCTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: VWSEVQSRAHCSLVTPVLEPCQG*GQVSHW
Trigger: CCAGTGAGAGACCTGGCCTCAGCCCTGGCAGGGCTC...GAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGCCTGCTGGCCCCGCCTaGGGAATTGGACAACAGCGA +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVPAGPA*GIGQQR
Trigger: TCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGG...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp AAGCCCAGCCCATTGCAGCCCAGCCGCTTCTGGGAGATGATAGCCTCCCGGACTGGGTCCAGGCTGGCCTaGGCTCCCGAAACTCCCATG +
Preference number: 4 (lower is better)
Translates to: KPSPLQPSRFWEMIASRTGSRLA*APETPM
Trigger: CATGGGAGTTTCGGGAGCTCAGGCCAGCCTGGACCC...AGTCCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS-3UTR GCA 90 bp TCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGAACTAAGGACTTCCCGCCTCTCCCGCTaGCACTGCCTCTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SGGLRPAAVSSPPTELRTSRLSR*HCLCCS
Trigger: CGAGCAGCAGAGGCAGTGGCAGCGGGAGAGGCGGGA...AGTCCTTAGTTCTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334456.10
CDS-3UTR GCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGCCAAGAGCAGTGGGCTaGCCCCTACTCAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWEPRAVG*PLLSLD
Trigger: GTCCAGGCTGAGTAGGGGGCAGCCCACTGCTCTTGG...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR GCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGGGTACTGCTGGCTCCTaGAGAGGATGGAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWGTAGS*RGWSGR
Trigger: GCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACC...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR GCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTCGCGCTGCCGGGTACTaGTGGCTCCTGCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMARAAGY*WLLQRM
Trigger: CATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCG...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334456.10
CDS-3UTR GCA 90 bp TCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTAGAAGCCCAGCCCATTaGAGCCCAGCCGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: STRGSTADRASLTARCRPRSPAH*SPAASG
Trigger: CCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCT...AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
CDS-3UTR GCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTAGAAGCCCAGCCCATTaGAGCCCAGCCGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGRSPAH*SPAASG
Trigger: CCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCT...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGAGAAGCCCAGCCCATTaGAGCCCAGCCGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRRSPAH*SPAASG
Trigger: CCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCT...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCACCAAGATGACAGCTaGCACGGCCCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRHQDDS*HGPSLL
Trigger: AAGGAGGCTGGGGCCGTGGCAGCTGTCATCTTGGTG...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTTCCCTGGGCCCGCGCTaGTGCAGGACCTGCACCCTC +
Preference number: 4 (lower is better)
Translates to: VGRCRQFPLGGAQLTGPPSLGPR*CRTCTL
Trigger: GAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGA...AGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543575.5
CDS-3UTR GCA 90 bp AGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCCAGAGGATGTTGCGCGTaGGGAAGCCGGTGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: REKPVAGLTQESRPYGVSRGCCA*GSRCCR
Trigger: ACGACAGCACCGGCTTCCGCACGCGCAACATCCTCT...GGAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGAAGCAGAGGATGTTaGGCGTGCGGAAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGGSRGC*ACGSRC
Trigger: GCACCGGCTTCCGCACGCGCAACATCCTCTGCTTCC...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGGACACCTTGGTCCAGTaGTCACGGTTGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRDTLVQ*SRLEAT
Trigger: CGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTC...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCAGGTCCCAATCCCACCATCAGTATAGTAGTGGTCCTCAGGGGGCCTTCGCCCCCCAGGGCCCCTCTCTaGAGAGCACTGAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PGPNPTISIVVVLRGPSPPRAPL*RALSCP
Trigger: GGGGCAGCTCAGTGCTCTGCAGAGAGGGGCCCTGGG...GGGCGAAGGCCCCCTGAGGACCACTACTATACTGATGGTGGGATTGGGACCTGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp TCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGAACTAAGGACTCCCAGGGCCCCTCTCTaGAGAGCACTGAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SGGLRPAAVSSPPTELRTPRAPL*RALSCP
Trigger: GGGGCAGCTCAGTGCTCTGCAGAGAGGGGCCCTGGG...AGTCCTTAGTTCTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGGGCTTGAGGAAGACCTaGTGGCCCCGCCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRGLRKT*WPRLRN
Trigger: ATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCC...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGCTGCCGGGTACTGCTaGCTCCTGCAGAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGAAGYC*LLQRME
Trigger: CTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGC...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR CCA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTTGAGGAAGACCTGCTaGCCCCGCGGCTCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQLRKTC*PRGSAG
Trigger: ACCGGCTGAGCCGCGGGGCCAGCAGGTCTTCCTCAA...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR CCA 90 bp AGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGCCTCCTCACACACCAGCTaGGACTCACCATCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: RILRSRSVYAAPPFWSSASSHTS*DSPSSR
Trigger: CCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGA...GGCGGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR CCA 90 bp AAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCCTGGGGCAGCTCATGTaGGGGGTCCTCACACACCAG +
Preference number: 4 (lower is better)
Translates to: KREASGRADPRVPALWGLLGQLM*GVLTHQ
Trigger: CTGGTGTGTGAGGACCCCCCACATGAGCTGCCCCAG...GAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTCTGGGGCAGCTCATGTaGGGGGTCCTCACACACCAG +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGLGQLM*GVLTHQ
Trigger: CTGGTGTGTGAGGACCCCCCACATGAGCTGCCCCAG...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGACTGGGGCAGCTCATGTaGGGGGTCCTCACACACCAG +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGLGQLM*GVLTHQ
Trigger: CTGGTGTGTGAGGACCCCCCACATGAGCTGCCCCAG...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCAGTTCCCCGCACAGTTaGAGGATCTTGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVASSPHS*RILRSR
Trigger: CCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACT...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCGGGATGTTCAGGATCTaGCCCGTGGTCGCCACGTGT +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAGMFRI*PVVATC
Trigger: ACACGTGGCGACCACGGGCCAGATCCTGAACATCCC...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp TTGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCGGGATGTTCAGGATCTaGCCCGTGGTCGCCACGTGT +
Preference number: 4 (lower is better)
Translates to: LEDLAVAVGVRRPALLVFGMFRI*PVVATC
Trigger: ACACGTGGCGACCACGGGCCAGATCCTGAACATCCC...GAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp GCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTTACCCGCTCCCTGTTTaGCCCAGACAGGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: AAGPAPSAGRPGYASPPPYPLPV*PRQGKR
Trigger: TCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTA...AGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp TGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCTTGAGGAAGACCTGCTaGCCCCGCCTGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: CRTCTLRRATRVCFSTACLRKTC*PRLRNW
Trigger: CCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAA...GCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR CCA 90 bp CTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGTTGAGGAAGACCTGCTaGCCCCGCCTGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: LQDLHPPQGDQGMLLHRLLRKTC*PRLRNW
Trigger: CCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAA...CAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR CCA 90 bp TCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTACTCCCTGGGGGTCCTaGCTCCTTTGCAAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: STRGSTADRASLTARCRPTPWGS*LLCKGV
Trigger: GACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGT...AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCGTCGTCTCTACTCCCTaGGGGTCCTGGCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGVVSTP*GSWLLC
Trigger: GCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGAC...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp TCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTCAAGGGGGTCCAGGCTaGCCTGAGCTCCCGAAACTC +
Preference number: 4 (lower is better)
Translates to: STRGSTADRASLTARCRPQGGPG*PELPKL
Trigger: GAGTTTCGGGAGCTCAGGCCAGCCTGGACCCCCTTG...AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS-3UTR CCA 90 bp CTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCAGCCCAGCCGCTTCTaGGAGATGATAGCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLQDLHPPQGDQGMLLHRQPSRF*EMIASH
Trigger: ATGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTG...GCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543750.5
CDS-3UTR TCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSAARPA*GRPAGP
Trigger: GGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGC...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHAARPA*GRPAGP
Trigger: GGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGC...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGGGCCTGAAATGTCGATaGCAGAGCCCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: AAAGPAPSAGRPGYASPPGLKCR*QSPDSA
Trigger: TGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCC...CGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
CDS-3UTR TCA 90 bp GCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: AAAGPAPSAGRPGYASPPSTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...CGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
CDS-3UTR TCA 90 bp AAGCCCAGCCCATTGCAGCCCAGCCGCTTCTGGGAGATGATAGCCTCCCGGACTCTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KPSPLQPSRFWEMIASRTLTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...AGTCCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
CDS-3UTR TCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGTCCGCTAGCGGCATaGCCAGCACTTGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRCPLAA*PALGYQ
Trigger: CTGATACCCAAGTGCTGGTCATGCCGCTAGCGGACA...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp TTGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCTCCTTCTAGCTTGTTaGAGGCGCAGGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LEDLAVAVGVRRPALLVFLLLAC*RRRPRP
Trigger: TGGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAG...GAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCTCCTTCTAGCTTGTTaGAGGCGCAGGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRLLLAC*RRRPRP
Trigger: TGGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAG...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACAGGCCAGGGTGCTGGTaGGCACGGTGCTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDRPGCW*ARCWCS
Trigger: ACTACACCAGCACCGTGCTCACCAGCACCCTGGCCT...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp GAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGCCCTGGTTCTCGTTCTTaGTGGGGAAGCAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: EDLAVAVGVRRPALLVFRPGSRS*WGSRGC
Trigger: ACATCCTCTGCTTCCCCATCAAGAACGAGAACCAGG...GCGGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGAGTGGTGCCTCTCCATaGCGGAGCCCTCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVSGASP*RSPQSC
Trigger: ACAGCTCTGAGGGCTCCGTCATGGAGAGGCACCACT...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGAGTGGTGCCTCTCCATaGCGGAGCCCTCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVSGASP*RSPQSC
Trigger: ACAGCTCTGAGGGCTCCGTCATGGAGAGGCACCACT...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGAGTGGTGCCTCTCCATaGCGGAGCCCTCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWESGASP*RSPQSC
Trigger: ACAGCTCTGAGGGCTCCGTCATGGAGAGGCACCACT...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTAGGATGGCGATGGCCTaGGCAAAGTGGTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGRMAMA*AKWCLS
Trigger: GGAGAGGCACCACTTTGCTCAGGCCATCGCCATCCT...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACGGAGGCCGCGGATGGTaGACTTGTGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDGGRGW*TCGTPW
Trigger: CCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCC...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp AGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGCCATTGGACAACAGCGATaGGGATGTGGTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: RILRSRSVYAAPPFWSSAIGQQR*GCGAAP
Trigger: TGGTGCTGCACCACATCCTCATCGCTGTTGTCCAAT...GGCGGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR GCA 90 bp CCTGAAATGTCGATGACAGAGCCCAGACTCAGCAAGGCGTCCTCCAGTCGGTCGTCCCGCCTCTCCCGCTaGCACTGCCTCTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PEMSMTEPRLSKASSSRSSRLSR*HCLCCS
Trigger: CGAGCAGCAGAGGCAGTGGCAGCGGGAGAGGCGGGA...CGACCGACTGGAGGACGCCTTGCTGAGTCTGGGCTCTGTCATCGACATTTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR GCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTCCAAGAGCAGTGGGCTaGCCCCTACTCAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAPRAVG*PLLSLD
Trigger: GTCCAGGCTGAGTAGGGGGCAGCCCACTGCTCTTGG...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334456.10
CDS-3UTR GCA 90 bp GGGGGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTCGCCCTGTCCCCGCTaGCTGGAGTTCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGPHTPAGTHHPVGRCRQSPCPR*LEFRAG
Trigger: CCCTGCCCTGAACTCCAGGCAGCGGGGACAGGGCGA...CTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR GCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCGAGTGGCCGCATGCCTaGCCCATCACTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGEWPHA*PITPHR
Trigger: ACGATGAGGAGTGATGGGGCAGGCATGCGGCCACTC...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR GCA 90 bp GAGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGCGATTTCCCCTCCTGGATCCTGAGTGGCCGCATGCCTaGCCCATCACTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: EEDLLAPPVGKRFPLLDPEWPHA*PITPHR
Trigger: ACGATGAGGAGTGATGGGGCAGGCATGCGGCCACTC...AGGATCCAGGAGGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp GAGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGCGATTTCCCCTCCTGGATCCTGATGGAGTGGCCGCATaGCTGCCCCATCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: EEDLLAPPVGKRFPLLDPDGVAA*LPHHSS
Trigger: TGAGGAGTGATGGGGCAGGCATGCGGCCACTCCATC...AGGATCCAGGAGGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp GCTGGCCCCGCCTGTGGGCAAGCGATTTCCCCTCCTGGATCCTCTGTTTCTTCACGCGCTGCCGGGTACTaGTGGCTCCTGCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: AGPACGQAISPPGSSVSSRAAGY*WLLQRM
Trigger: CATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCG...TGAAGAAACAGAGGATCCAGGAGGGGAAATCGCTTGCCCACAGGCGGGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTCACCAAGATGACAGCTaGCACGGCCCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPHQDDS*HGPSLL
Trigger: AAGGAGGCTGGGGCCGTGGCAGCTGTCATCTTGGTG...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCTCAGCTGGCCACAGTaGACCAAGATGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVALSWPQ*TKMTAA
Trigger: GGCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCGCTGCTGCAGGACCTaGACCCTCCGCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSRCCRT*TLRRAT
Trigger: GGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCGCTGCTGCAGGACCTaGACCCTCCGCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: GTHHPVGRCRQFPLGGAQRCCRT*TLRRAT
Trigger: GGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG...CTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543575.5
CDS-3UTR GCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGCGCTGCTGCAGGACCTaGACCCTCCGCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRRCCRT*TLRRAT
Trigger: GGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCCTGGGCCCGCGCTGCTaGAGGACCTGCACCCTCCGC +
Preference number: 4 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRLGPRC*RTCTLR
Trigger: GCGGAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAG...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCGATGCCCGGGTCTCCTaGTGCAGGTATTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVADARVS*CRYWST
Trigger: AGTGCTCCAATACCTGCAGCAGGAGACCCGGGCATC...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGGATGCCCGGGTCTCCTaGTGCAGGTATTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRDARVS*CRYWST
Trigger: AGTGCTCCAATACCTGCAGCAGGAGACCCGGGCATC...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CAGCCCAACATGCTCTGCAGCTGTTGTACATCCTCGGAGGTGAGGTCCTTCAGCGCGTGCGGAAGCCGGTaGTGTCGTCCACGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: QPNMLCSCCTSSEVRSFSACGSR*CRPRRG
Trigger: ACCGCGGCGTGGACGACAGCACCGGCTTCCGCACGC...GCTGAAGGACCTCACCTCCGAGGATGTACAACAGCTGCAGAGCATGTTGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAAGAGGATGTTGCGCGTaGGGAAGCCGGTGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGRGCCA*GSRCCR
Trigger: ACGACAGCACCGGCTTCCGCACGCGCAACATCCTCT...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCAGAGGATGTTGCGCGTaGGGAAGCCGGTGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGRGCCA*GSRCCR
Trigger: ACGACAGCACCGGCTTCCGCACGCGCAACATCCTCT...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACGGAAGCAGAGGATGTTaGGCGTGCGGAAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDGSRGC*ACGSRC
Trigger: GCACCGGCTTCCGCACGCGCAACATCCTCTGCTTCC...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGAAGCAGAGGATGTTaGGCGTGCGGAAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAGSRGC*ACGSRC
Trigger: GCACCGGCTTCCGCACGCGCAACATCCTCTGCTTCC...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTCTCCATCGGCCTGTTaGCCATGGCCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVASPSAC*PWPSPG
Trigger: ACCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGA...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGCGCTCGTACAGCTCTaGCGCTTTGGGGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGALVQL*RFGEQV
Trigger: GACCTGTTCCCCAAAGCGGCAGAGCTGTACGAGCGC...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGGCGCTCGTACAGCTCTaGCGCTTTGGGGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWALVQL*RFGEQV
Trigger: GACCTGTTCCCCAAAGCGGCAGAGCTGTACGAGCGC...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGCGCTCGTACAGCTCTaGCGCTTTGGGGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVALVQL*RFGEQV
Trigger: GACCTGTTCCCCAAAGCGGCAGAGCTGTACGAGCGC...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGACACCTTGGTCCAGTaGTCACGGTTGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVDTLVQ*SRLEAT
Trigger: CGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTC...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCGACACCTTGGTCCAGTaGTCACGGTTGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGDTLVQ*SRLEAT
Trigger: CGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTC...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGACACCTTGGTCCAGTaGTCACGGTTGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPDTLVQ*SRLEAT
Trigger: CGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTC...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCTGGCTCTGTTCCCAGTaGATCTGGCCAGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGWLCSQ*IWPDQW
Trigger: CCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCTCTGTTCCCAGTaGATCTGGCCAGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRWLCSQ*IWPDQW
Trigger: CCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGCTCTGTTCCCAGTaGATCTGGCCAGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: PRTRGSVPSASGQTSGGLWLCSQ*IWPDQW
Trigger: CCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA...CAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp TCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACCCCAAAGGGGCAGCACCAGGACCATaGTCGCAGCCGCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SLRCLTFPFHEDPGDPKGAAPGP*SQPPAR
Trigger: GCGGGCGGGCGGCTGCGAGCATGGTCCTGGTGCTGC...CCCTTTGGGGTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp AAAGATGTTGCAGCCGTGGGTGTTGAGGATGGCGATGGCCTGAGCAAAGTGGTGGCAGCACCAGGACCATaGTCGCAGCCGCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: KDVAAVGVEDGDGLSKVVAAPGP*SQPPAR
Trigger: GCGGGCGGGCGGCTGCGAGCATGGTCCTGGTGCTGC...CACCACTTTGCTCAGGCCATCGCCATCCTCAACACCCACGGCTGCAACATCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGCAGCACCAGGACCATaGTCGCAGCCGCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQAAPGP*SQPPAR
Trigger: GCGGGCGGGCGGCTGCGAGCATGGTCCTGGTGCTGC...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AGTAGTGGTCCTCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGGGCTTGAGGAAGACCTaGTGGCCCCGCCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SSGPQGAFAPRLFLVLPQGLRKT*WPRLRN
Trigger: ATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCC...CTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGAGGACCACTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGGCTTGAGGAAGACCTaGTGGCCCCGCCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRAGLRKT*WPRLRN
Trigger: ATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCC...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGACAGAGCCCAGAGGGGTCCAGGCTGGCTaGAGGCTGTCGGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: RASLTARCRPEMSMTEPRGVQAG*RLSAHG
Trigger: GCCATGCGCCGACAGCCTGCAGCCAGCCTGGACCCC...TCTGGGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR GCA 90 bp AGCCTCATTGCACATGGCCCCACTCCCACTCACATGCTTCTCCACCGCCTGCAGGGGTCCTGGCTCCTTTaGAAGGGGGTCCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SLIAHGPTPTHMLLHRLQGSWLL*KGVQAG
Trigger: GCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCC...CTGCAGGCGGTGGAGAAGCATGTGAGTGGGAGTGGGGCCATGTGCAATGAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541998.5
CDS-3UTR GCA 90 bp TCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCCAGGTGTGGAAACAGTaGTCAGGAAGCTGTAAACTT +
Preference number: 4 (lower is better)
Translates to: SAHGCGGGGGSSGLRKTCQVWKQ*SGSCKL
Trigger: AAGTTTACAGCTTCCTGAGCACTGTTTCCACACCTG...GCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTATCAGGAGCCAGTaGAGCCACCAGCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGGIRSQ*SHQPGQ
Trigger: TTGGCCAGGCTGGTGGCTCCACTGGCTCCTGATACC...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGGCATGACCAGCACTTaGGTATCAGGAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: QDLHPPQGDQGMLLHRLQGMTST*VSGASG
Trigger: TCCACTGGCTCCTGATACCCAAGTGCTGGTCATGCC...CTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAAGTTCCCCGCACAGTTaGAGGATCTTGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGSSPHS*RILRSR
Trigger: CCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACT...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCAGTTCCCCGCACAGTTaGAGGATCTTGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGSSPHS*RILRSR
Trigger: CCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACT...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTTGAAGATGCGGAGATaGTGGGCCAGGTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVALKMRR*WARSVA
Trigger: GGCCACAGACCTGGCCCACCATCTCCGCATCTTCAA...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTTCCAGTGCTCACGGTTaGAGGCCACGCGCTCGTACA +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGSSAHG*RPRART
Trigger: TGTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGA...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTTCCAGTGCTCACGGTTaGAGGCCACGCGCTCGTACA +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPSSAHG*RPRART
Trigger: TGTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGA...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGCACTGGCTGCAGGAATaGGTAAGGGGCTCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: PRTRGSVPSASGQTSGGLHWLQE*VRGSGQ
Trigger: TTGGCCTGAGCCCCTTACCCATTCCTGCAGCCAGTG...CAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCACAGCGATGAGGATGTaGTGCAGCACCAGGACCATG +
Preference number: 4 (lower is better)
Translates to: LLQDLHPPQGDQGMLLHRTAMRM*CSTRTM
Trigger: CATGGTCCTGGTGCTGCACCACATCCTCATCGCTGT...GCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR CCA 90 bp GCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGACAGCGATGAGGATGTaGTGCAGCACCAGGACCATG +
Preference number: 4 (lower is better)
Translates to: AAAGPAPSAGRPGYASPPTAMRM*CSTRTM
Trigger: CATGGTCCTGGTGCTGCACCACATCCTCATCGCTGT...CGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR CCA 90 bp CAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGACAGCGATGAGGATGTaGTGCAGCACCAGGACCATG +
Preference number: 4 (lower is better)
Translates to: QDLHPPQGDQGMLLHRLQTAMRM*CSTRTM
Trigger: CATGGTCCTGGTGCTGCACCACATCCTCATCGCTGT...CTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR CCA 90 bp GACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGCTCCCCGCCTGAGGAATTaGACAACAGCGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: DLHPPQGDQGMLLHRLQAPRLRN*TTAMRM
Trigger: CATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGG...AGCCTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR CCA 90 bp GGGGGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGCAAGGGGGTCCAGGCTaGCTGCAGGCTGTCGGCGCA +
Preference number: 4 (lower is better)
Translates to: GGPHTPAGTHHPVGRCRQQGGPG*LQAVGA
Trigger: TGCGCCGACAGCCTGCAGCCAGCCTGGACCCCCTTG...CTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTACTCCCTGGGGGTCCTaGCTCCTTTGCAAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMATPWGS*LLCKGV
Trigger: GACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGT...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGGTCGTCTCTACTCCCTaGGGGTCCTGGCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRVVSTP*GSWLLC
Trigger: GCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGAC...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRAARPA*GRPAGP
Trigger: GGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGC...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVASTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATCTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHLTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTTGTCCGCTAGCGGCATaGCCAGCACTTGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGCPLAA*PALGYQ
Trigger: CTGATACCCAAGTGCTGGTCATGCCGCTAGCGGACA...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp GATGCCCTGATCGGCCGGGATGCGGATCTCATAGCTCTCATCATCCACCACGCCCACAGTGCACCAAGATaGCAGCTGCCACGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DALIGRDADLIALIIHHAHSAPR*QLPRPQ
Trigger: CTGGGGCCGTGGCAGCTGTCATCTTGGTGCACTGTG...GGCGTGGTGGATGATGAGAGCTATGAGATCCGCATCCCGGCCGATCAGGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGTACATCCTCGGAGGTaGGGTCCTTCAGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPVHPRR*GPSAGW
Trigger: CCATCCAGCTGAAGGACCTCACCTCCGAGGATGTAC...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGCTCCTTCTAGCTTGTTaGAGGCGCAGGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRLLLAC*RRRPRP
Trigger: TGGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAG...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGCTCCTTCTAGCTTGTTaGAGGCGCAGGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWELLLAC*RRRPRP
Trigger: TGGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAG...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGCTCCTTCTAGCTTGTTaGAGGCGCAGGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVLLLAC*RRRPRP
Trigger: TGGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAG...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp ATCCAGGTCGTAGAGTTCCCCGCACAGTTGGAGGATCTTGCGGTCGCGGTCGGTAGGCCAGGGTGCTGGTaGGCACGGTGCTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: IQVVEFPAQLEDLAVAVGRPGCW*ARCWCS
Trigger: ACTACACCAGCACCGTGCTCACCAGCACCCTGGCCT...ACCGACCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTCTACGACCTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCTGTCCCGCGATGCCCTaGTCGGCCGGGATGCGGATC +
Preference number: 4 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTCPAMP*SAGMRI
Trigger: GATCCGCATCCCGGCCGATCAGGGCATCGCGGGACA...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp CCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGGAGAATGGGCGATGCTaGTGCCGCAGTAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: PRTRGSVPSASGQTSGGLENGRC*CRSRWR
Trigger: TCTCCATCTACTGCGGCATCAGCATCGCCCATTCTC...CAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp CCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCGGTCTGTGGCCAAGATaGTGTCCCGCATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: PLPVWPRQGKRLAQRHTGGLWPR*CPASDP
Trigger: TGGATCTGATGCGGGACATCATCTTGGCCACAGACC...GCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGGGTCTGTGGCCAAGATaGTGTCCCGCATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRGLWPR*CPASDP
Trigger: TGGATCTGATGCGGGACATCATCTTGGCCACAGACC...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGGAGCCCTGCCAGGGCTaGGGCCAGGTCTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSEPCQG*GQVSHW
Trigger: CCAGTGAGAGACCTGGCCTCAGCCCTGGCAGGGCTC...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GAGTTCCCCGCACAGTTGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCATTGGACAACAGCGATaGGGATGTGGTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: EFPAQLEDLAVAVGVRRPIGQQR*GCGAAP
Trigger: TGGTGCTGCACCACATCCTCATCGCTGTTGTCCAAT...GGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR TCA 90 bp TGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCATTGGACAACAGCGATaGGGATGTGGTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: CRTCTLRRATRVCFSTACIGQQR*GCGAAP
Trigger: TGGTGCTGCACCACATCCTCATCGCTGTTGTCCAAT...GCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR GCA 90 bp AGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGCTCTCCCGCTGCCACTaGCTCTGCTGCTCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: STADRASLTARCRPEMSMLSRCH*LCCSAG
Trigger: GCCAGCCGAGCAGCAGAGGCAGTGGCAGCGGGAGAG...CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR GCA 90 bp GGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTGCTCTGCTGCCCCGCTaGTCCCGCCTCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPHTPAGTHHPVGRCRQFALLPR*SRLSRC
Trigger: GCAGCGGGAGAGGCGGGAGCAGCGGGGCAGCAGAGC...AAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR GCA 90 bp GGCCCCGCCTGTGGGCAAGCGATTTCCCCTCCTGGATCCTCTGTTTCTTCATCCCCAAGAGCAGTGGGCTaGCCCCTACTCAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: GPACGQAISPPGSSVSSSPRAVG*PLLSLD
Trigger: GTCCAGGCTGAGTAGGGGGCAGCCCACTGCTCTTGG...GGATGAAGAAACAGAGGATCCAGGAGGGGAAATCGCTTGCCCACAGGCGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGACTCAGCTGGCCACAGTaGACCAAGATGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGLSWPQ*TKMTAA
Trigger: GGCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAG...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 4 (lower is better)
Translates to: AAGPAPSAGRPGYASPPPCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...AGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR GCA 90 bp GACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGCTTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 4 (lower is better)
Translates to: DLHPPQGDQGMLLHRLQACFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...AGCCTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR GCA 90 bp CCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCAAGATGACAGCTGCCACCTGGGCCCGCGCTGCTaGAGGACCTGCACCCTCCGC +
Preference number: 4 (lower is better)
Translates to: PFLIITQLATVHQDDSCHLGPRC*RTCTLR
Trigger: GCGGAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAG...GTGGCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR GCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCCTGGGCCCGCGCTaGTGCAGGACCTGCACCCTC +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKSLGPR*CRTCTL
Trigger: GAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGA...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGTCCCTGGGCCCGCGCTaGTGCAGGACCTGCACCCTC +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRSLGPR*CRTCTL
Trigger: GAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGA...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTCCCTGGGCCCGCGCTaGTGCAGGACCTGCACCCTC +
Preference number: 4 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSSLGPR*CRTCTL
Trigger: GAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGA...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGACAGTTGGAGGATCTTaGGGTCGCGGTCGGTGTACG +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWETVGGS*GRGRCT
Trigger: CGTACACCGACCGCGACCGCAAGATCCTCCAACTGT...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGATGCCCGGGTCTCCTaGTGCAGGTATTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGDARVS*CRYWST
Trigger: AGTGCTCCAATACCTGCAGCAGGAGACCCGGGCATC...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGGAGGCAGCAGCGGGATaGCCGGGTCTCCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GTHHPVGRCRQFPLGGAQEAAAG*PGLLLQ
Trigger: CTGCAGCAGGAGACCCGGGCATCCCGCTGCTGCCTC...CTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCAGTGCTGGATCACATaGTCGTCCTCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAQCWIT*SSSSVN
Trigger: GTTCACCGACGAGGACGAGCATGTGATCCAGCACTG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCCACAGAGCAGATCTCTaGGTTGCTGAGGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: CRTCTLRRATRVCFSTACHRADL*VAEVSG
Trigger: GCCAGAAACCTCAGCAACGCAGAGATCTGCTCTGTG...GCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCCTGATCGGCCGGGATaGGGATCTCATAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRPDRPG*GSHSSH
Trigger: ATGAGAGCTATGAGATCCGCATCCCGGCCGATCAGG...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGGCGTGCGGAAGCCGGTaGTGTCGTCCACGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRACGSR*CRPRRG
Trigger: ACCGCGGCGTGGACGACAGCACCGGCTTCCGCACGC...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CCAGGTCCCAATCCCACCATCAGTATAGTAGTGGTCCTCAGGGGGCCTTCGCCCGGAAGCAGAGGATGTTaGGCGTGCGGAAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PGPNPTISIVVVLRGPSPGSRGC*ACGSRC
Trigger: GCACCGGCTTCCGCACGCGCAACATCCTCTGCTTCC...GGGCGAAGGCCCCCTGAGGACCACTACTATACTGATGGTGGGATTGGGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTCATGTCCTGCAGCATaGTCAGGATGGCCATGGACG +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVASCPAA*SGWPWT
Trigger: CGTCCATGGCCATCCTGAGCATGCTGCAGGACATGA...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGATCTCCATCGGCCTGTTaGCCATGGCCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGSPSAC*PWPSPG
Trigger: ACCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGA...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGTCTCCATCGGCCTGTTaGCCATGGCCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVSPSAC*PWPSPG
Trigger: ACCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGA...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGTCTCCATCGGCCTGTTaGCCATGGCCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWESPSAC*PWPSPG
Trigger: ACCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGA...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCTCTCCATCGGCCTGTTaGCCATGGCCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGSPSAC*PWPSPG
Trigger: ACCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGA...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACGCGCTCGTACAGCTCTaGCGCTTTGGGGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDALVQL*RFGEQV
Trigger: GACCTGTTCCCCAAAGCGGCAGAGCTGTACGAGCGC...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTTGGCTCTGTTCCCAGTaGATCTGGCCAGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRAWLCSQ*IWPDQW
Trigger: CCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGTGTGGTCAGAGGTaGAGAGTAGGGCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRRCGQR*RVGPTA
Trigger: AGCAGTGGGCCCTACTCTGCACCTCTGACCACACCT...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGAGGTGTGGTCAGAGGTaGAGAGTAGGGCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWERCGQR*RVGPTA
Trigger: AGCAGTGGGCCCTACTCTGCACCTCTGACCACACCT...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATGGGCCTGTCTCCCAGTaGGGGGATCCCTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHGPVSQ*GDPSCP
Trigger: TGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCC...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTGGGCCTGTCTCCCAGTaGGGGGATCCCTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRGPVSQ*GDPSCP
Trigger: TGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCC...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp CATCTTCCCACCAGCTGTGATAAGGGTCTTCAGCCTCATTGCACATGGCCCCACGGGGTCCAGGCTGGCTaGAGGCTGTCGGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: HLPTSCDKGLQPHCTWPHGVQAG*RLSAHG
Trigger: GCCATGCGCCGACAGCCTGCAGCCAGCCTGGACCCC...GTGGGGCCATGTGCAATGAGGCTGAAGACCCTTATCACAGCTGGTGGGAAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541998.5
CDS-3UTR GCA 90 bp GTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTGGGTCCTGGCTCCTTTaGAAGGGGGTCCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VGRCRQFPLGGAQLTGPPGSWLL*KGVQAG
Trigger: GCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCC...AGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR GCA 90 bp TCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTACAGGAAAGGCAGAATaGCTGCCCCCTGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: STRGSTADRASLTARCRPTGKAE*LPPEAT
Trigger: GGTGGCTTCAGGGGGCAGGCATTCTGCCTTTCCTGT...AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS-3UTR CCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTCCTCACACACCAGCTaGGACTCACCATCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVASSHTS*DSPSSR
Trigger: CCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGA...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp TCTGAGAAGCCCAGCCCATTGCAGCCCAGCCGCTTCTGGGAGATGATAGCCTCCCTGGGGCAGCTCATGTaGGGGGTCCTCACACACCAG +
Preference number: 4 (lower is better)
Translates to: SEKPSPLQPSRFWEMIASLGQLM*GVLTHQ
Trigger: CTGGTGTGTGAGGACCCCCCACATGAGCTGCCCCAG...GGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
CDS-3UTR CCA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCTGGGGCAGCTCATGTaGGGGGTCCTCACACACCAG +
Preference number: 4 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRLGQLM*GVLTHQ
Trigger: CTGGTGTGTGAGGACCCCCCACATGAGCTGCCCCAG...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CCAGGTCCCAATCCCACCATCAGTATAGTAGTGGTCCTCAGGGGGCCTTCGCCCCAGCCCAGCCGCTTCTaGGAGATGATAGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PGPNPTISIVVVLRGPSPQPSRF*EMIASR
Trigger: CCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTG...GGGCGAAGGCCCCCTGAGGACCACTACTATACTGATGGTGGGATTGGGACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR CCA 90 bp TCTGAGAAGCCCAGCCCATTGCAGCCCAGCCGCTTCTGGGAGATGATAGCCTCCCAGCCCAGCCGCTTCTaGGAGATGATAGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SEKPSPLQPSRFWEMIASQPSRF*EMIASR
Trigger: CCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTG...GGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
CDS-3UTR CCA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGGGTATCAGGAGCCAGTaGAGCCACCAGCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQGIRSQ*SHQPGQ
Trigger: TTGGCCAGGCTGGTGGCTCCACTGGCTCCTGATACC...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCCCCCGTCGAACACCTTaGCCACCAGCTCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: PLPVWPRQGKRLAQRHTGPRRTP*PPAHSD
Trigger: ATCAGAATGAGCTGGTGGCCAAGGTGTTCGACGGGG...GCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp AGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGCCCAAAATTGGAGTCAATaGCAGCCACAGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: RILRSRSVYAAPPFWSSAQNWSQ*QPQAGS
Trigger: GGATCCAGCCTGTGGCTGCCATTGACTCCAATTTTG...GGCGGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGTGCTCAGGATGGCCATaGACGTGTCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVCSGWP*TCHPRA
Trigger: TGCCCGAGGATGACACGTCCATGGCCATCCTGAGCA...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGTTGAAGATGCGGAGATaGTGGGCCAGGTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRLKMRR*WARSVA
Trigger: GGCCACAGACCTGGCCCACCATCTCCGCATCTTCAA...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCTTGAAGATGCGGAGATaGTGGGCCAGGTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGLKMRR*WARSVA
Trigger: GGCCACAGACCTGGCCCACCATCTCCGCATCTTCAA...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCTTCCAGCCCTTGGTCTaGTCAGAGAGGTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGFQPLV*SERSQE
Trigger: CTCCTGTGACCTCTCTGACCAGACCAAGGGCTGGAA...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACTCCAGTGCTCACGGTTaGAGGCCACGCGCTCGTACA +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDSSAHG*RPRART
Trigger: TGTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGA...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCACTTGTGGGACACCTTaGTCCAGTGCTCACGGTTGG +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVATCGTP*SSAHGW
Trigger: CCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGT...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCCGGATGGTGAACTTGTaGGACACCTTGGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGRMVNL*DTLVQC
Trigger: GCACTGGACCAAGGTGTCCCACAAGTTCACCATCCG...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCGGATGGTGAACTTGTaGGACACCTTGGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVARMVNL*DTLVQC
Trigger: GCACTGGACCAAGGTGTCCCACAAGTTCACCATCCG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCAGCGAGTTGTTACTTaGGAGGCCGCGGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAQRVVT*EAADGE
Trigger: TTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGCAGGGAAGTGTCCCTaGAGGGGATCACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGAGKCP*RGSLSI
Trigger: GATGCTGAGTGATCCCCTCCAGGGACACTTCCCTGC...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGCAGGGAAGTGTCCCTaGAGGGGATCACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPAGKCP*RGSLSI
Trigger: GATGCTGAGTGATCCCCTCCAGGGACACTTCCCTGC...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCAGGGAAGTGTCCCTaGAGGGGATCACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRAGKCP*RGSLSI
Trigger: GATGCTGAGTGATCCCCTCCAGGGACACTTCCCTGC...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCGGAGACCCCAAAGGGTaGGAGTCCTCAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAGDPKG*ESSKGK
Trigger: CTTTCCCTTTGAGGACTCCCACCCTTTGGGGTCTCC...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCGGAGACCCCAAAGGGTaGGAGTCCTCAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGGDPKG*ESSKGK
Trigger: CTTTCCCTTTGAGGACTCCCACCCTTTGGGGTCTCC...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCACAGCGATGAGGATGTaGTGCAGCACCAGGACCATG +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVATAMRM*CSTRTM
Trigger: CATGGTCCTGGTGCTGCACCACATCCTCATCGCTGT...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCCCCGCCTGAGGAATTaGACAACAGCGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRPRLRN*TTAMRM
Trigger: CATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGG...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGTTGAGGAAGACCTGCTaGCCCCGCCTGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRLRKTC*PRLRNW
Trigger: CCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAA...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGATTGAGGAAGACCTGCTaGCCCCGCCTGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGLRKTC*PRLRNW
Trigger: CCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAA...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGTTGAGGAAGACCTGCTaGCCCCGCCTGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWLRKTC*PRLRNW
Trigger: CCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAA...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATCAAGGGGGTCCAGGCTaGCTGCAGGCTGTCGGCGCA +
Preference number: 4 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHQGGPG*LQAVGA
Trigger: TGCGCCGACAGCCTGCAGCCAGCCTGGACCCCCTTG...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACACAAGGGGGTCCAGGCTaGGGCTCAGCCGGTCGCGCT +
Preference number: 4 (lower is better)
Translates to: HHPVGRCRQFPLGGAQLTQGGPG*GSAGRA
Trigger: AGCGCGACCGGCTGAGCCCCAGCCTGGACCCCCTTG...TGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535701.1
3UTR CAA 72 bp TCCTGGTTCTCGTTCTTGATGGGGAAGCAGAGGATGTaGCGCGTGCGGAAGCCGGTGCTGTCGTCCACGCCG +
Preference number: 4 (lower is better)
Translates to: SWFSFLMGKQRM*RVRKPVLSSTP
Trigger: CGGCGTGGACGACAGCACCGGCTTCCGCACGCGCAACATCCTCTGCTTCCCCATCAAGAACGAGAACCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGGCCTGAAATGTCGATaGCAGAGCCCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVGLKCR*QSPDSA
Trigger: TGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCC...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCCTGAAATGTCGATaGCAGAGCCCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGGLKCR*QSPDSA
Trigger: TGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCC...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRASTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTTGTCCGCTAGCGGCATaGCCAGCACTTGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMACPLAA*PALGYQ
Trigger: CTGATACCCAAGTGCTGGTCATGCCGCTAGCGGACA...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GTTTCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGTGTCCGCTAGCGGCATaGCCAGCACTTGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: VSTRGSTADRASLTARCRCPLAA*PALGYQ
Trigger: CTGATACCCAAGTGCTGGTCATGCCGCTAGCGGACA...CCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
CDS-3UTR TCA 90 bp AAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCCTGTCAAGGGAAAGCTaGCCTCTTCCCCGAGCACTT +
Preference number: 4 (lower is better)
Translates to: KREASGRADPRVPALWGLLSRES*PLPRAL
Trigger: AAGTGCTCGGGGAAGAGGTCAGCTTTCCCTTGACAG...GAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGCTGTCAAGGGAAAGCTaGCCTCTTCCCCGAGCACTT +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVLSRES*PLPRAL
Trigger: AAGTGCTCGGGGAAGAGGTCAGCTTTCCCTTGACAG...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGTCAAGGGAAAGCTaGCCTCTTCCCCGAGCACTT +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGLSRES*PLPRAL
Trigger: AAGTGCTCGGGGAAGAGGTCAGCTTTCCCTTGACAG...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CAGAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATAGGCCAGGGTGCTGGTaGGCACGGTGCTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: QRKREKPVAGLTQESRPYRPGCW*ARCWCS
Trigger: ACTACACCAGCACCGTGCTCACCAGCACCCTGGCCT...ATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCGTCATCCAGGTGGGTaGAGAGGTTCTTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVARHPGG*RGSLPL
Trigger: AAGTGGCAAAGAACCTCTTCACCCACCTGGATGACG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCGTCATCCAGGTGGGTaGAGAGGTTCTTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRRHPGG*RGSLPL
Trigger: AAGTGGCAAAGAACCTCTTCACCCACCTGGATGACG...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCCTGGTTCTCGTTCTTaGTGGGGAAGCAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAPGSRS*WGSRGC
Trigger: ACATCCTCTGCTTCCCCATCAAGAACGAGAACCAGG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGAGAATGGGCGATGCTaGTGCCGCAGTAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPENGRC*CRSRWR
Trigger: TCTCCATCTACTGCGGCATCAGCATCGCCCATTCTC...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp AGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCCCCTCGAGGTAGTTGGTaGGCTCCAGGTTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: REKPVAGLTQESRPYGVSPRGSW*APGSCR
Trigger: TCTACAAGAACCTGGAGCTCACCAACTACCTCGAGG...GGAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCCTCGAGGTAGTTGGTaGGCTCCAGGTTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAPRGSW*APGSCR
Trigger: TCTACAAGAACCTGGAGCTCACCAACTACCTCGAGG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp GAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGCCTGTGGTCCAGGTCATaGCACATGCAGGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: EDLAVAVGVRRPALLVFRLWSRS*HMQEIN
Trigger: GTTTATTTCCTGCATGTGTCATGACCTGGACCACAG...GCGGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGTCTTCTGGAGGTCCTTaGAGATGCGGAGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVSSGGP*RCGDGG
Trigger: CCCACCATCTCCGCATCTTCAAGGACCTCCAGAAGA...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGGAGTGGCCGCATGCCTaGCCCATCACTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: PASHRQEEAWLAHSYLGLEWPHA*PITPHR
Trigger: ACGATGAGGAGTGATGGGGCAGGCATGCGGCCACTC...CAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334456.10
CDS-3UTR GCA 90 bp GTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTGGTACTGCTGGCTCCTaGAGAGGATGGAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: VGRCRQFPLGGAQLTGPPGTAGS*RGWSGR
Trigger: GCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACC...AGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR GCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGCTCAGCCGGTCGCGCTaGCGGGTACTGCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKLSRSR*RVLLAP
Trigger: AGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAG...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR GCA 90 bp CACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACACTCAGCCGGTCGCGCTaGCGGGTACTGCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HHPVGRCRQFPLGGAQLTLSRSR*RVLLAP
Trigger: AGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAG...TGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR GCA 90 bp GAGTTCCCCGCACAGTTGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCTCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 4 (lower is better)
Translates to: EFPAQLEDLAVAVGVRRPSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...GGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR GCA 90 bp GCGCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACTCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 4 (lower is better)
Translates to: ALLQDLHPPQGDQGMLLHSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...GTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
CDS-3UTR GCA 90 bp CAGAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATAGAAGCCCAGCCCATTaGAGCCCAGCCGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QRKREKPVAGLTQESRPYRSPAH*SPAASG
Trigger: CCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCT...ATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVACFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCAAGATGACAGCTGCTCCCTGGGCCCGCGCTaGTGCAGGACCTGCACCCTC +
Preference number: 4 (lower is better)
Translates to: APFLIITQLATVHQDDSCSLGPR*CRTCTL
Trigger: GAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAGGGA...GCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR GCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGTGGAGCACTTTGAGCTaGAGGGAAGAGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRWSTLS*REEASR
Trigger: CCTGGATGCCTCTTCCCTGCAGCTCAAAGTGCTCCA...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTTGGAGCACTTTGAGCTaGAGGGAAGAGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPWSTLS*REEASR
Trigger: CCTGGATGCCTCTTCCCTGCAGCTCAAAGTGCTCCA...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGATGGAGCACTTTGAGCTaGAGGGAAGAGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGWSTLS*REEASR
Trigger: CCTGGATGCCTCTTCCCTGCAGCTCAAAGTGCTCCA...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGCAGCCCAACATGCTCTaGAGCTGTTGTACATCCTCG +
Preference number: 4 (lower is better)
Translates to: PRTRGSVPSASGQTSGGLQPNML*SCCTSS
Trigger: CGAGGATGTACAACAGCTGCAGAGCATGTTGGGCTG...CAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTACACAGAGCATGGCCTaGAGCTCACAGCCCAACATG +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGTQSMA*SSQPNM
Trigger: CATGTTGGGCTGTGAGCTGCAGGCCATGCTCTGTGT...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGACACAGAGCATGGCCTaGAGCTCACAGCCCAACATG +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWTQSMA*SSQPNM
Trigger: CATGTTGGGCTGTGAGCTGCAGGCCATGCTCTGTGT...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGCAGTGCTGGATCACATaGTCGTCCTCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRQCWIT*SSSSVN
Trigger: GTTCACCGACGAGGACGAGCATGTGATCCAGCACTG...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCAGTGCTGGATCACATaGTCGTCCTCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWQCWIT*SSSSVN
Trigger: GTTCACCGACGAGGACGAGCATGTGATCCAGCACTG...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCACAGAGCAGATCTCTaGGTTGCTGAGGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRHRADL*VAEVSG
Trigger: GCCAGAAACCTCAGCAACGCAGAGATCTGCTCTGTG...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTCCTGATCGGCCGGGATaGGGATCTCATAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPPDRPG*GSHSSH
Trigger: ATGAGAGCTATGAGATCCGCATCCCGGCCGATCAGG...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTTCATGTCCTGCAGCATaGTCAGGATGGCCATGGACG +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGSCPAA*SGWPWT
Trigger: CGTCCATGGCCATCCTGAGCATGCTGCAGGACATGA...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCTCATGTCCTGCAGCATaGTCAGGATGGCCATGGACG +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGSCPAA*SGWPWT
Trigger: CGTCCATGGCCATCCTGAGCATGCTGCAGGACATGA...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGGCATCAGATCCAGCATaGGCTGATAGTCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRASDPA*ADSPSG
Trigger: CCCGGAAGGACTATCAGCGCATGCTGGATCTGATGC...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGCATCAGATCCAGCATaGGCTGATAGTCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVASDPA*ADSPSG
Trigger: CCCGGAAGGACTATCAGCGCATGCTGGATCTGATGC...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCATCAGATCCAGCATaGGCTGATAGTCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVASDPA*ADSPSG
Trigger: CCCGGAAGGACTATCAGCGCATGCTGGATCTGATGC...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCACATTCCATAGCCTCTaGTGGGACTCCGCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGTFHSL*WDSAER
Trigger: TCGCTCTGCGGAGTCCCAGCAGAGGCTATGGAATGT...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCAGGGTCCTGGCTCCTTTaGAAGGGGGTCCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGTHHPVGRCRQFPLGGAGSWLL*KGVQAG
Trigger: CCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCC...TGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR CCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACGCCCCCTACTCAGCCTaGACTCAACACCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDAPYSA*TQHPNP
Trigger: TGGATTGGGGTGTTGAGTCCAGGCTGAGTAGGGGGC...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR CCA 90 bp GCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACCAGCCAGACTAAGGTaGCACCTCGCCCTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: AGTHHPVGRCRQFPLGGAPARLR*HLALSP
Trigger: CGGGGACAGGGCGAGGTGCCACCTTAGTCTGGCTGG...TGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR CCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGTCCTCACACACCAGCTaGGACTCACCATCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVSSHTS*DSPSSR
Trigger: CCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGA...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCGGACTCTGGGGCAGCTCATGTaGGGGGTCCTCACACACCAG +
Preference number: 4 (lower is better)
Translates to: RLQAPFLIITQLATVHRTLGQLM*GVLTHQ
Trigger: CTGGTGTGTGAGGACCCCCCACATGAGCTGCCCCAG...AGTCCGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGGCATGACCAGCACTTaGGTATCAGGAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPGMTST*VSGASG
Trigger: TCCACTGGCTCCTGATACCCAAGTGCTGGTCATGCC...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGATTGTCTTCCACCACCTaGCCCAGGCATCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGLSSTT*PRHPVK
Trigger: CTTGACAGGATGCCTGGGCCAGGTGGTGGAAGACAA...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGTTGTCTTCCACCACCTaGCCCAGGCATCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWELSSTT*PRHPVK
Trigger: CTTGACAGGATGCCTGGGCCAGGTGGTGGAAGACAA...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTTTGTCTTCCACCACCTaGCCCAGGCATCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPLSSTT*PRHPVK
Trigger: CTTGACAGGATGCCTGGGCCAGGTGGTGGAAGACAA...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGAGTTTCTGTTCCTTCTaGAAGGCCAGGGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRSFCSF*KARVLV
Trigger: CACCAGCACCCTGGCCTTCCAGAAGGAACAGAAACT...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGCCCCGTCGAACACCTTaGCCACCAGCTCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRPRRTP*PPAHSD
Trigger: ATCAGAATGAGCTGGTGGCCAAGGTGTTCGACGGGG...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCCCGTCGAACACCTTaGCCACCAGCTCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGPRRTP*PPAHSD
Trigger: ATCAGAATGAGCTGGTGGCCAAGGTGTTCGACGGGG...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GTGTGGTCAGAGGTGCAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTGCTCGGGATGTTCAGGATCTaGCCCGTGGTCGCCACGTGT +
Preference number: 4 (lower is better)
Translates to: VWSEVQSRAHCSLVTPVLGMFRI*PVVATC
Trigger: ACACGTGGCGACCACGGGCCAGATCCTGAACATCCC...GAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGATGGCAGCCACAGGCTaGATCCCATCATGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRMAATG*IPSWRS
Trigger: ACTTCTCCATGATGGGATCCAGCCTGTGGCTGCCAT...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTTGCTCAGGATGGCCATaGACGTGTCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSCSGWP*TCHPRA
Trigger: TGCCCGAGGATGACACGTCCATGGCCATCCTGAGCA...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGACCTCAGCCATCTTCTaGAGGTCCTTGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRTSAIF*RSLKMR
Trigger: CCGCATCTTCAAGGACCTCCAGAAGATGGCTGAGGT...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGTTCCAGCCCTTGGTCTaGTCAGAGAGGTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRFQPLV*SERSQE
Trigger: CTCCTGTGACCTCTCTGACCAGACCAAGGGCTGGAA...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGTTCCAGCCCTTGGTCTaGTCAGAGAGGTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWFQPLV*SERSQE
Trigger: CTCCTGTGACCTCTCTGACCAGACCAAGGGCTGGAA...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGACAGCTCTGCCGCTTTaGGGAACAGGTCCTGCAACA +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVTALPL*GTGPAT
Trigger: TGTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGT...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAACAGCTCTGCCGCTTTaGGGAACAGGTCCTGCAACA +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGTALPL*GTGPAT
Trigger: TGTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGT...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGACTTGTGGGACACCTTaGTCCAGTGCTCACGGTTGG +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVTCGTP*SSAHGW
Trigger: CCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGT...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGACTTGTGGGACACCTTaGTCCAGTGCTCACGGTTGG +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWETCGTP*SSAHGW
Trigger: CCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGT...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGCGGATGGTGAACTTGTaGGACACCTTGGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVRMVNL*DTLVQC
Trigger: GCACTGGACCAAGGTGTCCCACAAGTTCACCATCCG...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGGCAGGGAAGTGTCCCTaGAGGGGATCACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQAGKCP*RGSLSI
Trigger: GATGCTGAGTGATCCCCTCCAGGGACACTTCCCTGC...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGAACTAAGGACTGGGCCCACTGCTCATTaGTCACCCCTGTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SGGLRPAAVSSPPTELRTGPTAH*SPLCSQ
Trigger: CTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCC...AGTCCTTAGTTCTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTGGGCCCACTGCTCATTaGTCACCCCTGTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRGPTAH*SPLCSQ
Trigger: CTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCC...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGACTTGCCAAGGTGTaGTCAGAGGTGCAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: PLPVWPRQGKRLAQRHTGRLAKV*SEVQSR
Trigger: CCTACTCTGCACCTCTGACCACACCTTGGCAAGTCT...GCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGGAGCAAAGATCTGGTaGGGCAGAAATGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRAGAKIW*GRNGAR
Trigger: CCTTGCCCCATTTCTGCCCCACCAGATCTTTGCTCC...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGAGAGTCCCGGCCCTATaGGGTCTCCCAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSRVPAL*GLPSPR
Trigger: CCTGGGGCTTGGGAGACCCCATAGGGCCGGGACTCT...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTACAGCGATGAGGATGTaGTGCAGCACCAGGACCATG +
Preference number: 4 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRATAMRM*CSTRTM
Trigger: CATGGTCCTGGTGCTGCACCACATCCTCATCGCTGT...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGACAGCGATGAGGATGTaGTGCAGCACCAGGACCATG +
Preference number: 4 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRTAMRM*CSTRTM
Trigger: CATGGTCCTGGTGCTGCACCACATCCTCATCGCTGT...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGCCCCGCCTGAGGAATTaGACAACAGCGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVPRLRN*TTAMRM
Trigger: CATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGG...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCGGACTTTCCCCTCCTGCAAGGGGGTCCAGGCTaGCTGCAGGCTGTCGGCGCA +
Preference number: 4 (lower is better)
Translates to: SIPHYHSAGHSAPDFPLLQGGPG*LQAVGA
Trigger: TGCGCCGACAGCCTGCAGCCAGCCTGGACCCCCTTG...CAGGAGGGGAAAGTCCGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp GTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTACTCCCTGGGGGTCCTaGCTCCTTTGCAAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: VGRCRQFPLGGAQLTGPPTPWGS*LLCKGV
Trigger: GACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGT...AGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp CGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCGGACTACTCCCTGGGGGTCCTaGCTCCTTTGCAAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RLQAPFLIITQLATVHRTTPWGS*LLCKGV
Trigger: GACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGT...AGTCCGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp TGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCTCATTATCACTCAGCTaGCCACAGTGCACCGGACTT +
Preference number: 4 (lower is better)
Translates to: WRILRSRSVYAAPPFWSSSLSLS*PQCTGL
Trigger: AAGTCCGGTGCACTGTGGCCAGCTGAGTGATAATGA...GGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536308.5
CDS-3UTR CCA 90 bp GACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGCTTCATTATCACTCAGCTaGCCACAGTGCACCGGACTT +
Preference number: 4 (lower is better)
Translates to: DLHPPQGDQGMLLHRLQASLSLS*PQCTGL
Trigger: AAGTCCGGTGCACTGTGGCCAGCTGAGTGATAATGA...AGCCTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000543575.5
3UTR CAA 72 bp TGCACCAAGATGACAGCTGCCACGGCCCCAGCCTCCTaGTCCGCTAGCGGCATGACCAGCACTTGGGTATCA +
Preference number: 4 (lower is better)
Translates to: CTKMTAATAPAS*SASGMTSTWVS
Trigger: TGATACCCAAGTGCTGGTCATGCCGCTAGCGGACAAGGAGGCTGGGGCCGTGGCAGCTGTCATCTTGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp GCTAGCGGCATGACCAGCACTTGGGTATCAGGAGCCAGTGGAGCCACCAGCCTGAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: ASGMTSTWVSGASGATSLSTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...CAGGCTGGTGGCTCCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCGCTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
CDS-3UTR TCA 90 bp GGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GTHHPVGRCRQFPLGGAQLTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...CTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR TCA 90 bp AGCTCACAGCCCAACATGCTCTGCAGCTGTTGTACATCCTCGGAGGTGAGGTCCCTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SSQPNMLCSCCTSSEVRSLTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...GGACCTCACCTCCGAGGATGTACAACAGCTGCAGAGCATGTTGGGCTGTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTCACAGTGCACCAAGATaGCAGCTGCCACGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRHSAPR*QLPRPQ
Trigger: CTGGGGCCGTGGCAGCTGTCATCTTGGTGCACTGTG...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp ACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCAAGCACAGTGCACCAAGATaGCAGCTGCCACGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TACRLHSSLSLSWPQCTKHSAPR*QLPRPQ
Trigger: CTGGGGCCGTGGCAGCTGTCATCTTGGTGCACTGTG...CTTGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR TCA 90 bp GCTAGCGGCATGACCAGCACTTGGGTATCAGGAGCCAGTGGAGCCACCAGCCTGCTGTCAAGGGAAAGCTaGCCTCTTCCCCGAGCACTT +
Preference number: 4 (lower is better)
Translates to: ASGMTSTWVSGASGATSLLSRES*PLPRAL
Trigger: AAGTGCTCGGGGAAGAGGTCAGCTTTCCCTTGACAG...CAGGCTGGTGGCTCCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCGCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGCGTCATCCAGGTGGGTaGAGAGGTTCTTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVRHPGG*RGSLPL
Trigger: AAGTGGCAAAGAACCTCTTCACCCACCTGGATGACG...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCTGTCCCGCGATGCCCTaGTCGGCCGGGATGCGGATC +
Preference number: 4 (lower is better)
Translates to: KRISLKATQKGKAGGPPPCPAMP*SAGMRI
Trigger: GATCCGCATCCCGGCCGATCAGGGCATCGCGGGACA...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGGTTCTCGTTCTTaGTGGGGAAGCAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWPGSRS*WGSRGC
Trigger: ACATCCTCTGCTTCCCCATCAAGAACGAGAACCAGG...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGCCTGGTTCTCGTTCTTaGTGGGGAAGCAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWEPGSRS*WGSRGC
Trigger: ACATCCTCTGCTTCCCCATCAAGAACGAGAACCAGG...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGAGAATGGGCGATGCTaGTGCCGCAGTAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAENGRC*CRSRWR
Trigger: TCTCCATCTACTGCGGCATCAGCATCGCCCATTCTC...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTCCTCGAGGTAGTTGGTaGGCTCCAGGTTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGPRGSW*APGSCR
Trigger: TCTACAAGAACCTGGAGCTCACCAACTACCTCGAGG...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CAGAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATAGTGGTGCCTCTCCATaGCGGAGCCCTCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: QRKREKPVAGLTQESRPYSGASP*RSPQSC
Trigger: ACAGCTCTGAGGGCTCCGTCATGGAGAGGCACCACT...ATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GGGGGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGAGTGGTGCCTCTCCATaGCGGAGCCCTCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GGPHTPAGTHHPVGRCRQSGASP*RSPQSC
Trigger: ACAGCTCTGAGGGCTCCGTCATGGAGAGGCACCACT...CTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACGGTCTGTGGCCAAGATaGTGTCCCGCATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDGLWPR*CPASDP
Trigger: TGGATCTGATGCGGGACATCATCTTGGCCACAGACC...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACTCTTCTGGAGGTCCTTaGAGATGCGGAGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDSSGGP*RCGDGG
Trigger: CCCACCATCTCCGCATCTTCAAGGACCTCCAGAAGA...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTGGAGGCCGCGGATGGTaGACTTGTGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRGGRGW*TCGTPW
Trigger: CCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCC...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp ATCTGGTGGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAGCCAGTGGCCGGGCTaGCCCAAGAGTCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: IWWGRNGARRNHQAAQTKSQWPG*PKSPGP
Trigger: AGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCT...CTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGATTGGACAACAGCGATaGGGATGTGGTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVIGQQR*GCGAAP
Trigger: TGGTGCTGCACCACATCCTCATCGCTGTTGTCCAAT...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTCTCTCCCGCTGCCACTaGCTCTGCTGCTCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPLSRCH*LCCSAG
Trigger: GCCAGCCGAGCAGCAGAGGCAGTGGCAGCGGGAGAG...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334456.10
CDS-3UTR GCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGCGCGCTGCCGGGTACTaGTGGCTCCTGCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKRAAGY*WLLQRM
Trigger: CATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCG...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR GCA 90 bp CACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACACGCGCTGCCGGGTACTaGTGGCTCCTGCAGAGGATG +
Preference number: 4 (lower is better)
Translates to: HHPVGRCRQFPLGGAQLTRAAGY*WLLQRM
Trigger: CATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCG...TGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR GCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTCTCAGCCGGTCGCGCTaGCGGGTACTGCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPLSRSR*RVLLAP
Trigger: AGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAG...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR GCA 90 bp AGTAGTGGTCCTCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 4 (lower is better)
Translates to: SSGPQGAFAPRLFLVLPQCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...CTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGAGGACCACTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR GCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGATGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTCAGCCCAACATGCTCTaGAGCTGTTGTACATCCTCG +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGQPNML*SCCTSS
Trigger: CGAGGATGTACAACAGCTGCAGAGCATGTTGGGCTG...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGGCTCACAGCCCAACATaGTCTGCAGCTGTTGTACAT +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRAHSPT*SAAVVH
Trigger: ATGTACAACAGCTGCAGAGCATGTTGGGCTGTGAGC...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGACACAGAGCATGGCCTaGAGCTCACAGCCCAACATG +
Preference number: 4 (lower is better)
Translates to: RGSTADRASLTARCRPEMTQSMA*SSQPNM
Trigger: CATGTTGGGCTGTGAGCTGCAGGCCATGCTCTGTGT...CATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGCACAGAGCAGATCTCTaGGTTGCTGAGGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWEHRADL*VAEVSG
Trigger: GCCAGAAACCTCAGCAACGCAGAGATCTGCTCTGTG...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTCACAGAGCAGATCTCTaGGTTGCTGAGGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGHRADL*VAEVSG
Trigger: GCCAGAAACCTCAGCAACGCAGAGATCTGCTCTGTG...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CAAAGCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAGCGTGCGGAAGCCGGTaGTGTCGTCCACGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: QSGQPTGPYTTVAQSPRKACGSR*CRPRRG
Trigger: ACCGCGGCGTGGACGACAGCACCGGCTTCCGCACGC...TTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTGCGTGCGGAAGCCGGTaGTGTCGTCCACGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: TQGWALCALGLQKHSIASACGSR*CRPRRG
Trigger: ACCGCGGCGTGGACGACAGCACCGGCTTCCGCACGC...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGACATTGGCCAGGTGGCTaGGATACTGAGCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGHWPGG*DTEPHS
Trigger: TGAATGAGGCTCAGTATCGCAGCCACCTGGCCAATG...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGCATTGGCCAGGTGGCTaGGATACTGAGCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRHWPGG*DTEPHS
Trigger: TGAATGAGGCTCAGTATCGCAGCCACCTGGCCAATG...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTCATTGGCCAGGTGGCTaGGATACTGAGCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPHWPGG*DTEPHS
Trigger: TGAATGAGGCTCAGTATCGCAGCCACCTGGCCAATG...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGCTATGAAATTCATGTCCTaGAGCATGCTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: DLHPPQGDQGMLLHRLQAMKFMS*SMLRMA
Trigger: GGCCATCCTGAGCATGCTGCAGGACATGAATTTCAT...AGCCTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGGGGTTGGGCTCTCTGTaGCTTAGGGTTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRGLGSL*LRVAET
Trigger: TGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCC...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp TCCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCGGCTTGAGGAAGACCTaGTGGCCCCGCCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: STACRLHSSLSLSWPQCTGLRKT*WPRLRN
Trigger: ATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCC...GGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR GCA 90 bp ACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGACAGGGTCCTGGCTCCTTTaGAAGGGGGTCCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TADRASLTARCRPEMSMTGSWLL*KGVQAG
Trigger: GCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCC...TGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp TCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGAACTAAGGACTGCCCCCTACTCAGCCTaGACTCAACACCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: SGGLRPAAVSSPPTELRTAPYSA*TQHPNP
Trigger: TGGATTGGGGTGTTGAGTCCAGGCTGAGTAGGGGGC...AGTCCTTAGTTCTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000334456.10
CDS-3UTR CCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGCCAGCCAGACTAAGGTaGCACCTCGCCCTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRPARLR*HLALSP
Trigger: CGGGGACAGGGCGAGGTGCCACCTTAGTCTGGCTGG...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR CCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTGCTGCCGGGTACTGCTaGCTCCTGCAGAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRAAGYC*LLQRME
Trigger: CTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGC...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR CCA 90 bp CGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCCTCACACACCAGCTaGGACTCACCATCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: RGSTADRASLTARCRPEMSSHTS*DSPSSR
Trigger: CCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGA...CATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp AGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGCTGGGGCAGCTCATGTaGGGGGTCCTCACACACCAG +
Preference number: 4 (lower is better)
Translates to: STADRASLTARCRPEMSMLGQLM*GVLTHQ
Trigger: CTGGTGTGTGAGGACCCCCCACATGAGCTGCCCCAG...CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp GCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCGGACTTTCCCCTCCCTGGGGCAGCTCATGTaGGGGGTCCTCACACACCAG +
Preference number: 4 (lower is better)
Translates to: APFLIITQLATVHRTFPSLGQLM*GVLTHQ
Trigger: CTGGTGTGTGAGGACCCCCCACATGAGCTGCCCCAG...GGAGGGGAAAGTCCGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp GGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCAGCCCAGCCGCTTCTaGGAGATGATAGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GTHHPVGRCRQFPLGGAQQPSRF*EMIASR
Trigger: CCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTG...CTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
CDS-3UTR CCA 90 bp GCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTTCATTATCACTCAGCTaGCCACAGTGCACCAAGATG +
Preference number: 4 (lower is better)
Translates to: AAGPAPSAGRPGYASPPPSLSLS*PQCTKM
Trigger: CATCTTGGTGCACTGTGGCCAGCTGAGTGATAATGA...AGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR CCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGTCCTGCTGCAGGTATTaGAGCACTTTGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVSCCRY*STLSCR
Trigger: CCTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGA...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGTCCTGCTGCAGGTATTaGAGCACTTTGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWESCCRY*STLSCR
Trigger: CCTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGA...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AAGCCCAGCCCATTGCAGCCCAGCCGCTTCTGGGAGATGATAGCCTCCCGGACTTTGTCTTCCACCACCTaGCCCAGGCATCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: KPSPLQPSRFWEMIASRTLSSTT*PRHPVK
Trigger: CTTGACAGGATGCCTGGGCCAGGTGGTGGAAGACAA...AGTCCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp AGTAGTGGTCCTCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGAGTTTCTGTTCCTTCTaGAAGGCCAGGGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SSGPQGAFAPRLFLVLPQSFCSF*KARVLV
Trigger: CACCAGCACCCTGGCCTTCCAGAAGGAACAGAAACT...CTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGAGGACCACTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGAGTTTCTGTTCCTTCTaGAAGGCCAGGGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWSFCSF*KARVLV
Trigger: CACCAGCACCCTGGCCTTCCAGAAGGAACAGAAACT...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGAGTTTCTGTTCCTTCTaGAAGGCCAGGGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRSFCSF*KARVLV
Trigger: CACCAGCACCCTGGCCTTCCAGAAGGAACAGAAACT...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGAGGTTCTTTGCCACTTaGAGAAGAGCCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRRFFAT*RRAWHS
Trigger: TGAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCT...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGAGACGTCATCCAGGTaGGTGAAGAGGTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVETSSR*VKRFFA
Trigger: GGCAAAGAACCTCTTCACCCACCTGGATGACGTCTC...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGAGACGTCATCCAGGTaGGTGAAGAGGTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVETSSR*VKRFFA
Trigger: GGCAAAGAACCTCTTCACCCACCTGGATGACGTCTC...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGAGACGTCATCCAGGTaGGTGAAGAGGTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPETSSR*VKRFFA
Trigger: GGCAAAGAACCTCTTCACCCACCTGGATGACGTCTC...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGTCCGTGATGATCTCCTaGAGCAGGACAGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRSVMIS*SRTETS
Trigger: TGACGTCTCTGTCCTGCTCCAGGAGATCATCACGGA...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGTCCGTGATGATCTCCTaGAGCAGGACAGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRSVMIS*SRTETS
Trigger: TGACGTCTCTGTCCTGCTCCAGGAGATCATCACGGA...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTTCCGTGATGATCTCCTaGAGCAGGACAGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGSVMIS*SRTETS
Trigger: TGACGTCTCTGTCCTGCTCCAGGAGATCATCACGGA...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp TCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACCCCAAAGGGTCAGGATCTGGCCCGTaGTCGCCACGTGTCCCGCGA +
Preference number: 4 (lower is better)
Translates to: SLRCLTFPFHEDPGDPKGSGSGP*SPRVPR
Trigger: TCGCGGGACACGTGGCGACCACGGGCCAGATCCTGA...CCCTTTGGGGTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTACACCGATGACCTCCTaGTTCTCGTTCTTGATGGGG +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPTPMTS*FSFLMG
Trigger: CCCCATCAAGAACGAGAACCAGGAGGTCATCGGTGT...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCACACCGATGACCTCCTaGTTCTCGTTCTTGATGGGG +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGTPMTS*FSFLMG
Trigger: CCCCATCAAGAACGAGAACCAGGAGGTCATCGGTGT...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AGTAGTGGTCCTCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGACACCGATGACCTCCTaGTTCTCGTTCTTGATGGGG +
Preference number: 4 (lower is better)
Translates to: SSGPQGAFAPRLFLVLPQTPMTS*FSFLMG
Trigger: CCCCATCAAGAACGAGAACCAGGAGGTCATCGGTGT...CTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGAGGACCACTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGACACCGATGACCTCCTaGTTCTCGTTCTTGATGGGG +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWTPMTS*FSFLMG
Trigger: CCCCATCAAGAACGAGAACCAGGAGGTCATCGGTGT...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGATGGCAGCCACAGGCTaGATCCCATCATGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWMAATG*IPSWRS
Trigger: ACTTCTCCATGATGGGATCCAGCCTGTGGCTGCCAT...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGATGGCAGCCACAGGCTaGATCCCATCATGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRMAATG*IPSWRS
Trigger: ACTTCTCCATGATGGGATCCAGCCTGTGGCTGCCAT...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGATGGCAGCCACAGGCTaGATCCCATCATGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWEMAATG*IPSWRS
Trigger: ACTTCTCCATGATGGGATCCAGCCTGTGGCTGCCAT...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTAAGATGTTGCAGCCGTaGGTGTTGAGGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPKMLQP*VLRMAM
Trigger: CATCGCCATCCTCAACACCCACGGCTGCAACATCTT...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGAAGATGTTGCAGCCGTaGGTGTTGAGGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVKMLQP*VLRMAM
Trigger: CATCGCCATCCTCAACACCCACGGCTGCAACATCTT...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTAAGATGTTGCAGCCGTaGGTGTTGAGGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGKMLQP*VLRMAM
Trigger: CATCGCCATCCTCAACACCCACGGCTGCAACATCTT...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCAAGATGTTGCAGCCGTaGGTGTTGAGGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGKMLQP*VLRMAM
Trigger: CATCGCCATCCTCAACACCCACGGCTGCAACATCTT...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CCAGGTCCCAATCCCACCATCAGTATAGTAGTGGTCCTCAGGGGGCCTTCGCCCTTGAAGATGCGGAGATaGTGGGCCAGGTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: PGPNPTISIVVVLRGPSPLKMRR*WARSVA
Trigger: GGCCACAGACCTGGCCCACCATCTCCGCATCTTCAA...GGGCGAAGGCCCCCTGAGGACCACTACTATACTGATGGTGGGATTGGGACCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp AGTAGTGGTCCTCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGACCTCAGCCATCTTCTaGAGGTCCTTGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: SSGPQGAFAPRLFLVLPQTSAIF*RSLKMR
Trigger: CCGCATCTTCAAGGACCTCCAGAAGATGGCTGAGGT...CTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGAGGACCACTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGACCTCAGCCATCTTCTaGAGGTCCTTGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWETSAIF*RSLKMR
Trigger: CCGCATCTTCAAGGACCTCCAGAAGATGGCTGAGGT...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTACCTCAGCCATCTTCTaGAGGTCCTTGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPTSAIF*RSLKMR
Trigger: CCGCATCTTCAAGGACCTCCAGAAGATGGCTGAGGT...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTTCCAGCCCTTGGTCTaGTCAGAGAGGTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQFQPLV*SERSQE
Trigger: CTCCTGTGACCTCTCTGACCAGACCAAGGGCTGGAA...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACACAGCTCTGCCGCTTTaGGGAACAGGTCCTGCAACA +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDTALPL*GTGPAT
Trigger: TGTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGT...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCGGATGGTGAACTTGTaGGACACCTTGGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDRMVNL*DTLVQC
Trigger: GCACTGGACCAAGGTGTCCCACAAGTTCACCATCCG...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGCGAGTTGTTACTTaGGAGGCCGCGGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDQRVVT*EAADGE
Trigger: TTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTG...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCAAAGGAGCAAAGATCTaGTGGGGCAGAAATGGGGCA +
Preference number: 4 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGKGAKI*WGRNGA
Trigger: TGCCCCATTTCTGCCCCACCAGATCTTTGCTCCTTT...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGAGACCCCAAAGGGTaGGAGTCCTCAAAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAGDPKG*ESSKGK
Trigger: CTTTCCCTTTGAGGACTCCCACCCTTTGGGGTCTCC...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTCTGGCAGCTTCTTCCTaGGGCCCCTGTATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRLAASS*GPCIPQ
Trigger: CTGGGGGATACAGGGGCCCCAGGAAGAAGCTGCCAG...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGAGGCAGGAGGAAGCATaGCTGGCTCATTCATACCTG +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVRQEEA*LAHSYL
Trigger: CAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCT...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGAGGCAGGAGGAAGCATaGCTGGCTCATTCATACCTG +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWRQEEA*LAHSYL
Trigger: CAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCT...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACTGGCTGCAGGAATaGGTAAGGGGCTCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRHWLQE*VRGSGQ
Trigger: TTGGCCTGAGCCCCTTACCCATTCCTGCAGCCAGTG...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCAGAGTCCCGGCCCTATaGGGTCTCCCAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRRVPAL*GLPSPR
Trigger: CCTGGGGCTTGGGAGACCCCATAGGGCCGGGACTCT...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGCCCCGCCTGAGGAATTaGACAACAGCGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: RGSTADRASLTARCRPEMPRLRN*TTAMRM
Trigger: CATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGG...CATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp TCAGCCTCATTGCACATGGCCCCACTCCCACTCACATGCTTCTCCACCGCCTGCTTGAGGAAGACCTGCTaGCCCCGCCTGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: SASLHMAPLPLTCFSTACLRKTC*PRLRNW
Trigger: CCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAA...GCAGGCGGTGGAGAAGCATGTGAGTGGGAGTGGGGCCATGTGCAATGAGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541998.5
CDS-3UTR CCA 90 bp CTCCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACGTCGTCTCTACTCCCTaGGGGTCCTGGCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LHRLQAPFLIITQLATVHVVSTP*GSWLLC
Trigger: GCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGAC...GTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp CTACTCCCTGGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGCTGGCTGCAGGCAGCGATTTCCCCTCCTaGATCCTCTGTTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: LLPGGPGSFARGSRLAAGSDFPS*ILCFFI
Trigger: GATGAAGAAACAGAGGATCCAGGAGGGGAAATCGCT...GCCTGCAGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000546038.1
3UTR CAA 72 bp AGCTCGGCCACACCGATGACCTCCTGGTTCTCGTTCTaGATGGGGAAGCAGAGGATGTTGCGCGTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: SSATPMTSWFSF*MGKQRMLRVRK
Trigger: CTTCCGCACGCGCAACATCCTCTGCTTCCCCATCAAGAACGAGAACCAGGAGGTCATCGGTGTGGCCGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTCGTCATCCAGGTGGGTaGAGAGGTTCTTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSRHPGG*RGSLPL
Trigger: AAGTGGCAAAGAACCTCTTCACCCACCTGGATGACG...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp TCATCGGAGACCTTCATGTGGTACATCATCATCTCATTGGCCAGGTGGCTGCGATGTCCCGCGATGCCCTaGTCGGCCGGGATGCGGATC +
Preference number: 4 (lower is better)
Translates to: SSETFMWYIIISLARWLRCPAMP*SAGMRI
Trigger: GATCCGCATCCCGGCCGATCAGGGCATCGCGGGACA...TCGCAGCCACCTGGCCAATGAGATGATGATGTACCACATGAAGGTCTCCGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp AGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGCCAACGAGGGGTATAGGTaGAACTTGCAAAATTGGAGT +
Preference number: 4 (lower is better)
Translates to: RILRSRSVYAAPPFWSSANEGYR*NLQNWS
Trigger: ACTCCAATTTTGCAAGTTTCACCTATACCCCTCGTT...GGCGGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCCTCGAGGTAGTTGGTaGGCTCCAGGTTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDPRGSW*APGSCR
Trigger: TCTACAAGAACCTGGAGCTCACCAACTACCTCGAGG...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCTGTGGTCCAGGTCATaGCACATGCAGGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVALWSRS*HMQEIN
Trigger: GTTTATTTCCTGCATGTGTCATGACCTGGACCACAG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCTGTGGTCCAGGTCATaGCACATGCAGGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRLWSRS*HMQEIN
Trigger: GTTTATTTCCTGCATGTGTCATGACCTGGACCACAG...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATAGGATGGCGATGGCCTaGGCAAAGTGGTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHRMAMA*AKWCLS
Trigger: GGAGAGGCACCACTTTGCTCAGGCCATCGCCATCCT...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGAGGATGGCGATGGCCTaGGCAAAGTGGTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRRMAMA*AKWCLS
Trigger: GGAGAGGCACCACTTTGCTCAGGCCATCGCCATCCT...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTTCCTTCCGGGAGAAATaGTCAAAGATGTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGSFREK*SKMLQP
Trigger: CGGCTGCAACATCTTTGATCATTTCTCCCGGAAGGA...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGGGAGGCCGCGGATGGTaGACTTGTGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRGGRGW*TCGTPW
Trigger: CCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCC...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTATTGGACAACAGCGATaGGGATGTGGTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAIGQQR*GCGAAP
Trigger: TGGTGCTGCACCACATCCTCATCGCTGTTGTCCAAT...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp CACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACACCTGCTGGCCCCGCCTaGGGAATTGGACAACAGCGA +
Preference number: 4 (lower is better)
Translates to: HHPVGRCRQFPLGGAQLTPAGPA*GIGQQR
Trigger: TCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGG...TGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR GCA 90 bp AGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGGAGTGGCCGCATGCCTaGCCCATCACTCCTCATCGT +
Preference number: 4 (lower is better)
Translates to: STADRASLTARCRPEMSMEWPHA*PITPHR
Trigger: ACGATGAGGAGTGATGGGGCAGGCATGCGGCCACTC...CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR GCA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCGATGGAGTGGCCGCATaGCTGCCCCATCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTDGVAA*LPHHSS
Trigger: TGAGGAGTGATGGGGCAGGCATGCGGCCACTCCATC...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR GCA 90 bp TCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACCCCAAAGGGGGTACTGCTGGCTCCTaGAGAGGATGGAGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SLRCLTFPFHEDPGDPKGGTAGS*RGWSGR
Trigger: GCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACC...CCCTTTGGGGTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334456.10
CDS-3UTR GCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGTCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGATCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTTCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GAGACGTCATCCAGGTGGGTGAAGAGGTTCTTTGCCACTTGGAGAAGAGCCTGGAGAAGCCCAGCCCATTaGAGCCCAGCCGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ETSSRWVKRFFATWRRAWRSPAH*SPAASG
Trigger: CCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCT...CCAGGCTCTTCTCCAAGTGGCAAAGAACCTCTTCACCCACCTGGATGACGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATCACCAAGATGACAGCTaGCACGGCCCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHHQDDS*HGPSLL
Trigger: AAGGAGGCTGGGGCCGTGGCAGCTGTCATCTTGGTG...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp TCCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCCTCAGCTGGCCACAGTaGACCAAGATGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: STACRLHSSLSLSWPQCTLSWPQ*TKMTAA
Trigger: GGCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAG...GGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR GCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGCTCACAGCCCAACATaGTCTGCAGCTGTTGTACAT +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGAHSPT*SAAVVH
Trigger: ATGTACAACAGCTGCAGAGCATGTTGGGCTGTGAGC...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATACACAGAGCATGGCCTaGAGCTCACAGCCCAACATG +
Preference number: 4 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHTQSMA*SSQPNM
Trigger: CATGTTGGGCTGTGAGCTGCAGGCCATGCTCTGTGT...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGTGAAGAGGTTCTTTaGCACTTGGAGAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGGEEVL*HLEKSL
Trigger: CAGGCTCTTCTCCAAGTGGCAAAGAACCTCTTCACC...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGGTGAAGAGGTTCTTTaGCACTTGGAGAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWEGEEVL*HLEKSL
Trigger: CAGGCTCTTCTCCAAGTGGCAAAGAACCTCTTCACC...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGCACAGAGCAGATCTCTaGGTTGCTGAGGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQHRADL*VAEVSG
Trigger: GCCAGAAACCTCAGCAACGCAGAGATCTGCTCTGTG...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCCTGATCGGCCGGGATaGGGATCTCATAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRPDRPG*GSHSSH
Trigger: ATGAGAGCTATGAGATCCGCATCCCGGCCGATCAGG...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAAGCGGATGGGCATATaGGTCAGGGATGTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRKRMGI*VRDVQD
Trigger: ATCCTGAACATCCCTGACGCATATGCCCATCCGCTT...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTAAGCGGATGGGCATATaGGTCAGGGATGTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPKRMGI*VRDVQD
Trigger: ATCCTGAACATCCCTGACGCATATGCCCATCCGCTT...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGAAGCGGATGGGCATATaGGTCAGGGATGTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWKRMGI*VRDVQD
Trigger: ATCCTGAACATCCCTGACGCATATGCCCATCCGCTT...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCAGAGGATGTTGCGCGTaGGGAAGCCGGTGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTRGCCA*GSRCCR
Trigger: ACGACAGCACCGGCTTCCGCACGCGCAACATCCTCT...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGGAAGCAGAGGATGTTaGGCGTGCGGAAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQGSRGC*ACGSRC
Trigger: GCACCGGCTTCCGCACGCGCAACATCCTCTGCTTCC...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTCATTGGCCAGGTGGCTaGGATACTGAGCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAHWPGG*DTEPHS
Trigger: TGAATGAGGCTCAGTATCGCAGCCACCTGGCCAATG...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATTCATGTCCTGCAGCATaGTCAGGATGGCCATGGACG +
Preference number: 4 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHSCPAA*SGWPWT
Trigger: CGTCCATGGCCATCCTGAGCATGCTGCAGGACATGA...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCGGAAAGAGTTGTTTGTaGCTCTGTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAGKSCL*LCGPGH
Trigger: ATGACCTGGACCACAGAGGCACAAACAACTCTTTCC...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGGGCTTGGGAAAGACTTaGCAAGGTGTGGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQGLGKT*QGVVRG
Trigger: ACCTCTGACCACACCTTGGCAAGTCTTTCCCAAGCC...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCAAGATGCCACACTCTaGTCACTCAGATGTCTCACC +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWQDATL*SLRCLT
Trigger: GGTGAGACATCTGAGTGAGCAGAGTGTGGCATCTTG...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGCAAGATGCCACACTCTaGTCACTCAGATGTCTCACC +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVQDATL*SLRCLT
Trigger: GGTGAGACATCTGAGTGAGCAGAGTGTGGCATCTTG...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGTGCGGGGATCCCTCCTaGCCATCAATCCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRCGDPS*PSIPSC
Trigger: GCAGGATGGGATTGATGGGCAGGAGGGATCCCCGCA...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGGTCCTGGCTCCTTTaGAAGGGGGTCCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPGSWLL*KGVQAG
Trigger: GCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCC...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444035.6
CDS-3UTR CCA 90 bp GTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTGCCCCCTACTCAGCCTaGACTCAACACCCCAATCCA +
Preference number: 4 (lower is better)
Translates to: VGRCRQFPLGGAQLTGPPAPYSA*TQHPNP
Trigger: TGGATTGGGGTGTTGAGTCCAGGCTGAGTAGGGGGC...AGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR CCA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTTTGAGGAAGACCTGCTaGCCCCGCGGCTCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSLRKTC*PRGSAG
Trigger: ACCGGCTGAGCCGCGGGGCCAGCAGGTCTTCCTCAA...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000418754.6
CDS-3UTR CCA 90 bp CCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCGGACTCCTCACACACCAGCTaGGACTCACCATCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: PPAGSIPHYHSAGHSAPDSSHTS*DSPSSR
Trigger: CCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGA...GTCCGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTCATTATCACTCAGCTaGCCACAGTGCACCAAGATG +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRSLSLS*PQCTKM
Trigger: CATCTTGGTGCACTGTGGCCAGCTGAGTGATAATGA...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGAGTTCCCCGCACAGTTaGAGGATCTTGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSSSPHS*RILRSR
Trigger: CCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACT...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTACCTTGCAAGAAAGCTaGAGATTGTCCTCCGACACC +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPTLQES*RLSSDT
Trigger: GGTGTCGGAGGACAATCTCCAGCTTTCTTGCAAGGT...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTCCTTCAGCTGGATaGACTTCTTGTCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGGPSAG*TSCLPP
Trigger: TGGTGGAAGACAAGAAGTCCATCCAGCTGAAGGACC...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCGTGAGGTCCTTCAGCTaGATGGACTTCTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: KREASGRADPRVPALWGLVRSFS*MDFLSS
Trigger: GGAAGACAAGAAGTCCATCCAGCTGAAGGACCTCAC...GAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGAGGTCCTTCAGCTaGATGGACTTCTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRAVRSFS*MDFLSS
Trigger: GGAAGACAAGAAGTCCATCCAGCTGAAGGACCTCAC...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGGTGAGGTCCTTCAGCTaGATGGACTTCTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWVRSFS*MDFLSS
Trigger: GGAAGACAAGAAGTCCATCCAGCTGAAGGACCTCAC...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCCACTTGGAGAAGAGCCTaGCACTCACACTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: REKPVAGLTQESRPYGVSTWRRA*HSHLSF
Trigger: GAAACTCAAGTGTGAGTGCCAGGCTCTTCTCCAAGT...GGAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGACTTGGAGAAGAGCCTaGCACTCACACTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PRTRGSVPSASGQTSGGLTWRRA*HSHLSF
Trigger: GAAACTCAAGTGTGAGTGCCAGGCTCTTCTCCAAGT...CAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTAGGTTCTTTGCCACTTaGAGAAGAGCCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRARFFAT*RRAWHS
Trigger: TGAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCT...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGAGACGTCATCCAGGTaGGTGAAGAGGTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAETSSR*VKRFFA
Trigger: GGCAAAGAACCTCTTCACCCACCTGGATGACGTCTC...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGAGACGTCATCCAGGTaGGTGAAGAGGTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSETSSR*VKRFFA
Trigger: GGCAAAGAACCTCTTCACCCACCTGGATGACGTCTC...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGCCCCGTCGAACACCTTaGCCACCAGCTCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: EKKREASGRADPRVPALWPRRTP*PPAHSD
Trigger: ATCAGAATGAGCTGGTGGCCAAGGTGTTCGACGGGG...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCGGGATGTTCAGGATCTaGCCCGTGGTCGCCACGTGT +
Preference number: 4 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTGMFRI*PVVATC
Trigger: ACACGTGGCGACCACGGGCCAGATCCTGAACATCCC...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGTTGTATAGGAGAGAATaGGCGATGCTGATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: VALFPVHLARPVEGCGRWLYRRE*AMLMPQ
Trigger: CTGCGGCATCAGCATCGCCCATTCTCTCCTATACAA...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTTTGTATAGGAGAGAATaGGCGATGCTGATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPLYRRE*AMLMPQ
Trigger: CTGCGGCATCAGCATCGCCCATTCTCTCCTATACAA...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGACATCATCATCTCATTaGCCAGGTGGCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRTSSSH*PGGCDT
Trigger: AGTATCGCAGCCACCTGGCCAATGAGATGATGATGT...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGCAAAATTGGAGTCAATaGCAGCCACAGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWEQNWSQ*QPQAGS
Trigger: GGATCCAGCCTGTGGCTGCCATTGACTCCAATTTTG...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGCAAAATTGGAGTCAATaGCAGCCACAGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVQNWSQ*QPQAGS
Trigger: GGATCCAGCCTGTGGCTGCCATTGACTCCAATTTTG...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGACAAAATTGGAGTCAATaGCAGCCACAGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGQNWSQ*QPQAGS
Trigger: GGATCCAGCCTGTGGCTGCCATTGACTCCAATTTTG...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTCAGAGGAGAAGTCTGTaGTGCTGCTTGTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGQRRSL*CCLLFR
Trigger: CCGAAACAACAAGCAGCACCACAGACTTCTCCTCTG...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGACAGAGGAGAAGTCTGTaGTGCTGCTTGTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGQRRSL*CCLLFR
Trigger: CCGAAACAACAAGCAGCACCACAGACTTCTCCTCTG...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCAGAGGAGAAGTCTGTaGTGCTGCTTGTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGQRRSL*CCLLFR
Trigger: CCGAAACAACAAGCAGCACCACAGACTTCTCCTCTG...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGGCAACAGCTTGTAGATaGGCATTGCAATGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PRTRGSVPSASGQTSGGLATACR*ALQCAP
Trigger: TGGAGCACATTGCAATGCCCATCTACAAGCTGTTGC...CAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATTCCAGTGCTCACGGTTaGAGGCCACGCGCTCGTACA +
Preference number: 4 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHSSAHG*RPRART
Trigger: TGTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGA...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGACTTGTGGGACACCTTaGTCCAGTGCTCACGGTTGG +
Preference number: 4 (lower is better)
Translates to: PASHRQEEAWLAHSYLGLTCGTP*SSAHGW
Trigger: CCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGT...CAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGAAAGGAGCAAAGATCTaGTGGGGCAGAAATGGGGCA +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWEKGAKI*WGRNGA
Trigger: TGCCCCATTTCTGCCCCACCAGATCTTTGCTCCTTT...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp AGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCCATGGATCTTAGAGCATaGATTGTCTTACCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: REKPVAGLTQESRPYGVSMDLRA*IVLPAP
Trigger: GGGAGCGGGTAAGACAATCCATGCTCTAAGATCCAT...GGAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp AGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGGTCGTCTCTACTCCCTaGGGGTCCTGGCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: STADRASLTARCRPEMSMVVSTP*GSWLLC
Trigger: GCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGAC...CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp GGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGGTCGTCTCTACTCCCTaGGGGTCCTGGCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GTHHPVGRCRQFPLGGAQVVSTP*GSWLLC
Trigger: GCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGAC...CTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR TCA 90 bp ACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACCTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TLCSLRCLTFPFHEDPGDLTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...GTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp GGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCTGACAGGGCCTCCTTaGCAGCACGTTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GPHTPAGTHHPVGRCRQFLTGPP*QHVAGL
Trigger: CAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAG...AAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGGTACATCCTCGGAGGTaGGGTCCTTCAGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRVHPRR*GPSAGW
Trigger: CCATCCAGCTGAAGGACCTCACCTCCGAGGATGTAC...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp AAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTAGGATGGCGATGGCCTaGGCAAAGTGGTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KLRPRKVVLVQGHTGSPGRMAMA*AKWCLS
Trigger: GGAGAGGCACCACTTTGCTCAGGCCATCGCCATCCT...ACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp CAGAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATTCTTCTGGAGGTCCTTaGAGATGCGGAGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: QRKREKPVAGLTQESRPYSSGGP*RCGDGG
Trigger: CCCACCATCTCCGCATCTTCAAGGACCTCCAGAAGA...ATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTATTGGACAACAGCGATaGGGATGTGGTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRIGQQR*GCGAAP
Trigger: TGGTGCTGCACCACATCCTCATCGCTGTTGTCCAAT...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCCCTGCTGGCCCCGCCTaGGGAATTGGACAACAGCGA +
Preference number: 4 (lower is better)
Translates to: KRISLKATQKGKAGGPPPPAGPA*GIGQQR
Trigger: TCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGG...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGGTGGTGAGGATTAAATaGGATCACAGGTGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRVVRIK*DHRCGN
Trigger: GTTTCCACACCTGTGATCTCATTTAATCCTCACCAC...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540345.5
CDS-3UTR GCA 90 bp TTGACAGCACGTTGCAGGCCTGAAATGTCGATGACAGAGCCCAGACTCAGCAAGCCAAGAGCAGTGGGCTaGCCCCTACTCAGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: LTARCRPEMSMTEPRLSKPRAVG*PLLSLD
Trigger: GTCCAGGCTGAGTAGGGGGCAGCCCACTGCTCTTGG...CTTGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR GCA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 4 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCAAGATGACAGCTGCCACAGAAGCCCAGCCCATTaGAGCCCAGCCGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PFLIITQLATVHQDDSCHRSPAH*SPAASG
Trigger: CCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCT...GTGGCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR GCA 90 bp ATCCAGGTCGTAGAGTTCCCCGCACAGTTGGAGGATCTTGCGGTCGCGGTCGGTTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 4 (lower is better)
Translates to: IQVVEFPAQLEDLAVAVGCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...ACCGACCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTCTACGACCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR GCA 90 bp GTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTTGGAGCACTTTGAGCTaGAGGGAAGAGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: VGRCRQFPLGGAQLTGPPWSTLS*REEASR
Trigger: CCTGGATGCCTCTTCCCTGCAGCTCAAAGTGCTCCA...AGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp AAGCCCAGCCCATTGCAGCCCAGCCGCTTCTGGGAGATGATAGCCTCCCGGACTGCTCACAGCCCAACATaGTCTGCAGCTGTTGTACAT +
Preference number: 4 (lower is better)
Translates to: KPSPLQPSRFWEMIASRTAHSPT*SAAVVH
Trigger: ATGTACAACAGCTGCAGAGCATGTTGGGCTGTGAGC...AGTCCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp CAGAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATACACAGAGCATGGCCTaGAGCTCACAGCCCAACATG +
Preference number: 4 (lower is better)
Translates to: QRKREKPVAGLTQESRPYTQSMA*SSQPNM
Trigger: CATGTTGGGCTGTGAGCTGCAGGCCATGCTCTGTGT...ATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp CAGAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATCAGTGCTGGATCACATaGTCGTCCTCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: QRKREKPVAGLTQESRPYQCWIT*SSSSVN
Trigger: GTTCACCGACGAGGACGAGCATGTGATCCAGCACTG...ATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGAGAGGATGTTGCGCGTaGGGAAGCCGGTGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQRGCCA*GSRCCR
Trigger: ACGACAGCACCGGCTTCCGCACGCGCAACATCCTCT...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGATGAAATTCATGTCCTaGAGCATGCTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVMKFMS*SMLRMA
Trigger: GGCCATCCTGAGCATGCTGCAGGACATGAATTTCAT...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGATGAAATTCATGTCCTaGAGCATGCTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVMKFMS*SMLRMA
Trigger: GGCCATCCTGAGCATGCTGCAGGACATGAATTTCAT...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCATGAAATTCATGTCCTaGAGCATGCTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGMKFMS*SMLRMA
Trigger: GGCCATCCTGAGCATGCTGCAGGACATGAATTTCAT...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGGAAAGAGTTGTTTGTaGCTCTGTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVGKSCL*LCGPGH
Trigger: ATGACCTGGACCACAGAGGCACAAACAACTCTTTCC...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGATGGGCATTGCAATGTaGTCCATGAAGCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRMGIAM*SMKLIC
Trigger: GCAAATCAGCTTCATGGAGCACATTGCAATGCCCAT...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp AAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTGACACCTTGGTCCAGTaGTCACGGTTGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: KLRPRKVVLVQGHTGSPGDTLVQ*SRLEAT
Trigger: CGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTC...ACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCTGGCTCTGTTCCCAGTaGATCTGGCCAGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTWLCSQ*IWPDQW
Trigger: CCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GTGTGGTCAGAGGTGCAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTGCTCGGCTTGGGAAAGACTTaGCAAGGTGTGGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: VWSEVQSRAHCSLVTPVLGLGKT*QGVVRG
Trigger: ACCTCTGACCACACCTTGGCAAGTCTTTCCCAAGCC...GAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp TCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACCCCAAAGGGTGCGGGGATCCCTCCTaGCCATCAATCCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: SLRCLTFPFHEDPGDPKGCGDPS*PSIPSC
Trigger: GCAGGATGGGATTGATGGGCAGGAGGGATCCCCGCA...CCCTTTGGGGTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTGGGTTGGGCTCTCTGTaGCTTAGGGTTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRGLGSL*LRVAET
Trigger: TGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCC...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp CACTGCTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGCAGCACCAGGACCATaGTCGCAGCCGCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: HCSLVTPVLSENKLQSLRAAPGP*SQPPAR
Trigger: GCGGGCGGGCGGCTGCGAGCATGGTCCTGGTGCTGC...ACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp ACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGACACCACTCCCACTCACATaGTTCTCCACCGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TADRASLTARCRPEMSMTPLPLT*FSTACR
Trigger: CCTGCAGGCGGTGGAGAAGCATGTGAGTGGGAGTGG...TGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541998.5
CDS-3UTR GCA 90 bp AGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGCGTGGATGGGAGGCATaGAAGGCCAACTCCCTTAGG +
Preference number: 4 (lower is better)
Translates to: STADRASLTARCRPEMSMRGWEA*KANSLR
Trigger: CCTAAGGGAGTTGGCCTTGCATGCCTCCCATCCACG...CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS-3UTR GCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCAGGTGTGGAAACAGTaGTCAGGAAGCTGTAAACTT +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRQVWKQ*SGSCKL
Trigger: AAGTTTACAGCTTCCTGAGCACTGTTTCCACACCTG...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540345.5
CDS-3UTR CCA 90 bp GGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTGCTGCCGGGTACTGCTaGCTCCTGCAGAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: GPHTPAGTHHPVGRCRQFAAGYC*LLQRME
Trigger: CTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGC...AAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR CCA 90 bp GTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTTCCTCACACACCAGCTaGGACTCACCATCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: VGRCRQFPLGGAQLTGPPSSHTS*DSPSSR
Trigger: CCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGA...AGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp ACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACCTGGGGCAGCTCATGTaGGGGGTCCTCACACACCAG +
Preference number: 4 (lower is better)
Translates to: TLCSLRCLTFPFHEDPGDLGQLM*GVLTHQ
Trigger: CTGGTGTGTGAGGACCCCCCACATGAGCTGCCCCAG...GTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCGGTATCAGGAGCCAGTaGAGCCACCAGCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRGIRSQ*SHQPGQ
Trigger: TTGGCCAGGCTGGTGGCTCCACTGGCTCCTGATACC...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAGGTATCAGGAGCCAGTaGAGCCACCAGCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: HHPVGRCRQFPLGGAQLTGIRSQ*SHQPGQ
Trigger: TTGGCCAGGCTGGTGGCTCCACTGGCTCCTGATACC...TGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
CDS-3UTR CCA 90 bp GGGGGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGGGCATGACCAGCACTTaGGTATCAGGAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: GGPHTPAGTHHPVGRCRQGMTST*VSGASG
Trigger: TCCACTGGCTCCTGATACCCAAGTGCTGGTCATGCC...CTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
CDS-3UTR CCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTACCTTGCAAGAAAGCTaGAGATTGTCCTCCGACACC +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMATLQES*RLSSDT
Trigger: GGTGTCGGAGGACAATCTCCAGCTTTCTTGCAAGGT...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGGTGAGGTCCTTCAGCTaGATGGACTTCTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQVRSFS*MDFLSS
Trigger: GGAAGACAAGAAGTCCATCCAGCTGAAGGACCTCAC...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTACTTGGAGAAGAGCCTaGCACTCACACTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPTWRRA*HSHLSF
Trigger: GAAACTCAAGTGTGAGTGCCAGGCTCTTCTCCAAGT...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGACTTGGAGAAGAGCCTaGCACTCACACTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRTWRRA*HSHLSF
Trigger: GAAACTCAAGTGTGAGTGCCAGGCTCTTCTCCAAGT...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCACTTGGAGAAGAGCCTaGCACTCACACTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGTWRRA*HSHLSF
Trigger: GAAACTCAAGTGTGAGTGCCAGGCTCTTCTCCAAGT...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AAGCCCAGCCCATTGCAGCCCAGCCGCTTCTGGGAGATGATAGCCTCCCGGACTAGGTTCTTTGCCACTTaGAGAAGAGCCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: KPSPLQPSRFWEMIASRTRFFAT*RRAWHS
Trigger: TGAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCT...AGTCCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTAGGTTCTTTGCCACTTaGAGAAGAGCCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSRFFAT*RRAWHS
Trigger: TGAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCT...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATGAGACGTCATCCAGGTaGGTGAAGAGGTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHETSSR*VKRFFA
Trigger: GGCAAAGAACCTCTTCACCCACCTGGATGACGTCTC...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCGGGATGTTCAGGATCTaGCCCGTGGTCGCCACGTGT +
Preference number: 4 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSGMFRI*PVVATC
Trigger: ACACGTGGCGACCACGGGCCAGATCCTGAACATCCC...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGGGGATGTTCAGGATCTaGCCCGTGGTCGCCACGTGT +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKGMFRI*PVVATC
Trigger: ACACGTGGCGACCACGGGCCAGATCCTGAACATCCC...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp AGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCCGAACTTGCTGAACCATaGCCCATTGATCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: REKPVAGLTQESRPYGVSELAEP*PIDLVH
Trigger: GTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTC...GGAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCGAACTTGCTGAACCATaGCCCATTGATCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAELAEP*PIDLVH
Trigger: GTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTC...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CTGGTCAGTGGCCCGGCTGATGACAGGGACACAGAGCATGGCCTGCAGCTCACATTGTATAGGAGAGAATaGGCGATGCTGATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: LVSGPADDRDTEHGLQLTLYRRE*AMLMPQ
Trigger: CTGCGGCATCAGCATCGCCCATTCTCTCCTATACAA...TGTGAGCTGCAGGCCATGCTCTGTGTCCCTGTCATCAGCCGGGCCACTGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTTTGTATAGGAGAGAATaGGCGATGCTGATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSLYRRE*AMLMPQ
Trigger: CTGCGGCATCAGCATCGCCCATTCTCTCCTATACAA...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GGCATATGCGTCAGGGATGTTCAGGATCTGGCCCGTGGTCGCCACGTGTCCCGCACATCATCATCTCATTaGCCAGGTGGCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: GICVRDVQDLARGRHVSRTSSSH*PGGCDT
Trigger: AGTATCGCAGCCACCTGGCCAATGAGATGATGATGT...GCGGGACACGTGGCGACCACGGGCCAGATCCTGAACATCCCTGACGCATATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTACATCATCATCTCATTaGCCAGGTGGCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRATSSSH*PGGCDT
Trigger: AGTATCGCAGCCACCTGGCCAATGAGATGATGATGT...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGTGCTCAGGATGGCCATaGACGTGTCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSCSGWP*TCHPRA
Trigger: TGCCCGAGGATGACACGTCCATGGCCATCCTGAGCA...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp AGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGTGCTCAGGATGGCCATaGACGTGTCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: STADRASLTARCRPEMSMCSGWP*TCHPRA
Trigger: TGCCCGAGGATGACACGTCCATGGCCATCCTGAGCA...CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGATTTCGAGGCCACCTaGAAAGAGTTGTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRADFEAT*KELFVP
Trigger: AGGCACAAACAACTCTTTCCAGGTGGCCTCGAAATC...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGATTTCGAGGCCACCTaGAAAGAGTTGTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGDFEAT*KELFVP
Trigger: AGGCACAAACAACTCTTTCCAGGTGGCCTCGAAATC...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp TCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGAACTAAGGACTAAGATGTTGCAGCCGTaGGTGTTGAGGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: SGGLRPAAVSSPPTELRTKMLQP*VLRMAM
Trigger: CATCGCCATCCTCAACACCCACGGCTGCAACATCTT...AGTCCTTAGTTCTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GTGTGGTCAGAGGTGCAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTGCTCACCTCAGCCATCTTCTaGAGGTCCTTGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: VWSEVQSRAHCSLVTPVLTSAIF*RSLKMR
Trigger: CCGCATCTTCAAGGACCTCCAGAAGATGGCTGAGGT...GAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTCAGAGGAGAAGTCTGTaGTGCTGCTTGTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAQRRSL*CCLLFR
Trigger: CCGAAACAACAAGCAGCACCACAGACTTCTCCTCTG...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGCAACAGCTTGTAGATaGGCATTGCAATGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPATACR*ALQCAP
Trigger: TGGAGCACATTGCAATGCCCATCTACAAGCTGTTGC...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCAGACAAAGAATGGCTTaGGAAAGACTTGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGRQRMA*ERLAKV
Trigger: CACCTTGGCAAGTCTTTCCCAAGCCATTCTTTGTCT...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp AGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGACAGAGCCCAGACACTGGCTGCAGGAATaGGTAAGGGGCTCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RASLTARCRPEMSMTEPRHWLQE*VRGSGQ
Trigger: TTGGCCTGAGCCCCTTACCCATTCCTGCAGCCAGTG...TCTGGGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp CCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCACCCCGCCTGAGGAATTaGACAACAGCGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: PPPAGSIPHYHSAGHSAPPRLRN*TTAMRM
Trigger: CATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGG...TGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR CCA 90 bp CACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAGTCGTCTCTACTCCCTaGGGGTCCTGGCTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: HHPVGRCRQFPLGGAQLTVVSTP*GSWLLC
Trigger: GCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGAC...TGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp GGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGAGAGGCAACCGTGGATaGGAGGCATGCAAGGCCAAC +
Preference number: 4 (lower is better)
Translates to: GTHHPVGRCRQFPLGGAQRGNRG*EACKAN
Trigger: GTTGGCCTTGCATGCCTCCCATCCACGGTTGCCTCT...CTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAATGAGATCACAGGTGTaGAAACAGTGCTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGMRSQV*KQCSGS
Trigger: GCTTCCTGAGCACTGTTTCCACACCTGTGATCTCAT...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540345.5
CDS-3UTR CCA 90 bp TCGTCTCTACTCCCTGGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGCTGGCTATGAGATCACAGGTGTaGAAACAGTGCTCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SSLLPGGPGSFARGSRLAMRSQV*KQCSGS
Trigger: GCTTCCTGAGCACTGTTTCCACACCTGTGATCTCAT...AGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTAGCGATTTCCCCTCCTaGATCCTCTGTTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPSDFPS*ILCFFI
Trigger: GATGAAGAAACAGAGGATCCAGGAGGGGAAATCGCT...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540345.5
3UTR CAA 72 bp GTTTCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCTGAAATGTCGATGACA +
Preference number: 4 (lower is better)
Translates to: VSTRGSTADRAS*TARCRPEMSMT
Trigger: TGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
3UTR CAA 72 bp TCCTCGGAGGTGAGGTCCTTCAGCTGGATGGACTTCTaGTCTTCCACCACCTGGCCCAGGCATCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: SSEVRSFSWMDF*SSTTWPRHPVK
Trigger: CTTGACAGGATGCCTGGGCCAGGTGGTGGAAGACAAGAAGTCCATCCAGCTGAAGGACCTCACCTCCGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CAA 72 bp TCGTCCTCGTCGGTGAACAAGTCTCCTTCTAGCTTGTaGAAGGCGCAGGCCAAGGCCACCACCTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SSSSVNKSPSSL*KAQAKATTWSV
Trigger: CACTGACCAGGTGGTGGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGACTTGTTCACCGACGAGGACGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CAA 72 bp TGCTCGTCCTCGTCGGTGAACAAGTCTCCTTCTAGCTaGTTGAAGGCGCAGGCCAAGGCCACCACCTGGTCA +
Preference number: 4 (lower is better)
Translates to: CSSSSVNKSPSS*LKAQAKATTWS
Trigger: TGACCAGGTGGTGGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGACTTGTTCACCGACGAGGACGAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
3UTR CAA 72 bp GCCAGGTCCTCGTCGAACTTGCTGAACCATGGCCCATaGATCTTGTTCACCAGCTCGGCCACACCGATGACC +
Preference number: 4 (lower is better)
Translates to: ARSSSNLLNHGP*ILFTSSATPMT
Trigger: GGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTGGCCTGAAATGTCGATaGCAGAGCCCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRGLKCR*QSPDSA
Trigger: TGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCC...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp AGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGACAGAGCCCAGAGGCCTGAAATGTCGATaGCAGAGCCCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: RASLTARCRPEMSMTEPRGLKCR*QSPDSA
Trigger: TGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCC...TCTGGGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGGGCCTGAAATGTCGATaGCAGAGCCCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRGLKCR*QSPDSA
Trigger: TGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCC...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp GCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCAAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: AGTHHPVGRCRQFPLGGASTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...TGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGGAGAATGGGCGATGCTaGTGCCGCAGTAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRENGRC*CRSRWR
Trigger: TCTCCATCTACTGCGGCATCAGCATCGCCCATTCTC...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp GGGGGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGCCTCGAGGTAGTTGGTaGGCTCCAGGTTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GGPHTPAGTHHPVGRCRQPRGSW*APGSCR
Trigger: TCTACAAGAACCTGGAGCTCACCAACTACCTCGAGG...CTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTAGTGGTGCCTCTCCATaGCGGAGCCCTCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSSGASP*RSPQSC
Trigger: ACAGCTCTGAGGGCTCCGTCATGGAGAGGCACCACT...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTAGGATGGCGATGGCCTaGGCAAAGTGGTGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSRMAMA*AKWCLS
Trigger: GGAGAGGCACCACTTTGCTCAGGCCATCGCCATCCT...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp GATGCCCTGATCGGCCGGGATGCGGATCTCATAGCTCTCATCATCCACCACGCCTCCTTCCGGGAGAAATaGTCAAAGATGTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: DALIGRDADLIALIIHHASFREK*SKMLQP
Trigger: CGGCTGCAACATCTTTGATCATTTCTCCCGGAAGGA...GGCGTGGTGGATGATGAGAGCTATGAGATCCGCATCCCGGCCGATCAGGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp GTTTCCAAGATGCCACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGGGAGGCCGCGGATGGTaGACTTGTGGGACACCTTGG +
Preference number: 4 (lower is better)
Translates to: VSKMPHSAHSDVSPSPSMGGRGW*TCGTPW
Trigger: CCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCC...CATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGTGGCATCTTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTCTCTCTGCAGAGCACTaGGCTGCCCCTCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TQGWALCALGLQKHSIASLSAEH*AAPLAA
Trigger: AGCTGCCAGAGGGGCAGCTCAGTGCTCTGCAGAGAG...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTATTGGACAACAGCGATaGGGATGTGGTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: VGRCRQFPLGGAQLTGPPIGQQR*GCGAAP
Trigger: TGGTGCTGCACCACATCCTCATCGCTGTTGTCCAAT...AGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR TCA 90 bp AGTCGGTCGTCTCTACTCCCTGGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGGTGGTGAGGATTAAATaGGATCACAGGTGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SRSSLLPGGPGSFARGSRVVRIK*DHRCGN
Trigger: GTTTCCACACCTGTGATCTCATTTAATCCTCACCAC...CCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGACCGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR TCA 90 bp GTCCGGCTTGAGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGCGATTTCCCCTCCTCTTGGGTTTGTGGTaGGGATTAAATGAGATCACA +
Preference number: 4 (lower is better)
Translates to: VRLEEDLLAPPVGKRFPLLLGLW*GLNEIT
Trigger: TGTGATCTCATTTAATCCTCACCACAAACCCAAGAG...GAGGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR GCA 90 bp TTGACAGCACGTTGCAGGCCTGAAATGTCGATGACAGAGCCCAGACTCAGCAAGGATGGAGTGGCCGCATaGCTGCCCCATCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: LTARCRPEMSMTEPRLSKDGVAA*LPHHSS
Trigger: TGAGGAGTGATGGGGCAGGCATGCGGCCACTCCATC...CTTGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR GCA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGCTCAGCTGGCCACAGTaGACCAAGATGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQLSWPQ*TKMTAA
Trigger: GGCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAG...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GCTCCCTGGCCAGGCCATCTTCCCACCAGCTGTGATAAGGGTCTTCAGCCTCATTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 4 (lower is better)
Translates to: APWPGHLPTSCDKGLQPHCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...ATGAGGCTGAAGACCCTTATCACAGCTGGTGGGAAGATGGCCTGGCCAGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541998.5
CDS-3UTR GCA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTCTGGGCCCGCGCTGCTaGAGGACCTGCACCCTCCGC +
Preference number: 4 (lower is better)
Translates to: TPVLSENKLQSLREVGSLLGPRC*RTCTLR
Trigger: GCGGAGGGTGCAGGTCCTGCAGCAGCGCGGGCCCAG...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp TGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGACAGTTGGAGGATCTTaGGGTCGCGGTCGGTGTACG +
Preference number: 4 (lower is better)
Translates to: WILEHGLSYPLPVWPRQGTVGGS*GRGRCT
Trigger: CGTACACCGACCGCGACCGCAAGATCCTCCAACTGT...CCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACAGTTGGAGGATCTTaGGGTCGCGGTCGGTGTACG +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRTVGGS*GRGRCT
Trigger: CGTACACCGACCGCGACCGCAAGATCCTCCAACTGT...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AAAGATGTTGCAGCCGTGGGTGTTGAGGATGGCGATGGCCTGAGCAAAGTGGTGACAGTTGGAGGATCTTaGGGTCGCGGTCGGTGTACG +
Preference number: 4 (lower is better)
Translates to: KDVAAVGVEDGDGLSKVVTVGGS*GRGRCT
Trigger: CGTACACCGACCGCGACCGCAAGATCCTCCAACTGT...CACCACTTTGCTCAGGCCATCGCCATCCTCAACACCCACGGCTGCAACATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp CCCATTGATCTTGTTCACCAGCTCGGCCACACCGATGACCTCCTGGTTCTCGTTGATGCCCGGGTCTCCTaGTGCAGGTATTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: PIDLVHQLGHTDDLLVLVDARVS*CRYWST
Trigger: AGTGCTCCAATACCTGCAGCAGGAGACCCGGGCATC...AACGAGAACCAGGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp TCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGAACTAAGGACTGCTCACAGCCCAACATaGTCTGCAGCTGTTGTACAT +
Preference number: 4 (lower is better)
Translates to: SGGLRPAAVSSPPTELRTAHSPT*SAAVVH
Trigger: ATGTACAACAGCTGCAGAGCATGTTGGGCTGTGAGC...AGTCCTTAGTTCTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR GCA 90 bp AGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGACAGAGCCCAGACAGTGCTGGATCACATaGTCGTCCTCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: RASLTARCRPEMSMTEPRQCWIT*SSSSVN
Trigger: GTTCACCGACGAGGACGAGCATGTGATCCAGCACTG...TCTGGGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp GTGTGGTCAGAGGTGCAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTGCTCGGTGAAGAGGTTCTTTaGCACTTGGAGAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VWSEVQSRAHCSLVTPVLGEEVL*HLEKSL
Trigger: CAGGCTCTTCTCCAAGTGGCAAAGAACCTCTTCACC...GAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp CCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGGGTGAAGAGGTTCTTTaGCACTTGGAGAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PASHRQEEAWLAHSYLGLGEEVL*HLEKSL
Trigger: CAGGCTCTTCTCCAAGTGGCAAAGAACCTCTTCACC...CAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp CCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCAAGATGACAGCTGCCACAGAGGATGTTGCGCGTaGGGAAGCCGGTGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: PFLIITQLATVHQDDSCHRGCCA*GSRCCR
Trigger: ACGACAGCACCGGCTTCCGCACGCGCAACATCCTCT...GTGGCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTTCATGTCCTGCAGCATaGTCAGGATGGCCATGGACG +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRSCPAA*SGWPWT
Trigger: CGTCCATGGCCATCCTGAGCATGCTGCAGGACATGA...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCGCGCTCGTACAGCTCTaGCGCTTTGGGGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: KRISLKATQKGKAGGPPPALVQL*RFGEQV
Trigger: GACCTGTTCCCCAAAGCGGCAGAGCTGTACGAGCGC...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGCTCTGTTCCCAGTaGATCTGGCCAGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSWLCSQ*IWPDQW
Trigger: CCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCCAGAGTAGGGCCCACTaGTCATTGGTCACCCCTGTG +
Preference number: 4 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSQSRAH*SLVTPV
Trigger: CACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTG...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTTGCGGGGATCCCTCCTaGCCATCAATCCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSCGDPS*PSIPSC
Trigger: GCAGGATGGGATTGATGGGCAGGAGGGATCCCCGCA...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGACATTCCATAGCCTCTaGTGGGACTCCGCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSTFHSL*WDSAER
Trigger: TCGCTCTGCGGAGTCCCAGCAGAGGCTATGGAATGT...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp ATAAGGGTCTTCAGCCTCATTGCACATGGCCCCACTCCCACTCACATGCTTCTCGGCTTGAGGAAGACCTaGTGGCCCCGCCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: IRVFSLIAHGPTPTHMLLGLRKT*WPRLRN
Trigger: ATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCC...GAGAAGCATGTGAGTGGGAGTGGGGCCATGTGCAATGAGGCTGAAGACCCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541998.5
CDS-3UTR GCA 90 bp GGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTGGCTTGAGGAAGACCTaGTGGCCCCGCCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GPHTPAGTHHPVGRCRQFGLRKT*WPRLRN
Trigger: ATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCC...AAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp CTCCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACTCCTGCTGCAGGTATTaGAGCACTTTGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LHRLQAPFLIITQLATVHSCCRY*STLSCR
Trigger: CCTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGA...GTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp CCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGACCTTGCAAGAAAGCTaGAGATTGTCCTCCGACACC +
Preference number: 4 (lower is better)
Translates to: PASHRQEEAWLAHSYLGLTLQES*RLSSDT
Trigger: GGTGTCGGAGGACAATCTCCAGCTTTCTTGCAAGGT...CAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTTTGTCTTCCACCACCTaGCCCAGGCATCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRLSSTT*PRHPVK
Trigger: CTTGACAGGATGCCTGGGCCAGGTGGTGGAAGACAA...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCTTGTCTTCCACCACCTaGCCCAGGCATCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTLSSTT*PRHPVK
Trigger: CTTGACAGGATGCCTGGGCCAGGTGGTGGAAGACAA...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCCCCGTCGAACACCTTaGCCACCAGCTCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTPRRTP*PPAHSD
Trigger: ATCAGAATGAGCTGGTGGCCAAGGTGTTCGACGGGG...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTCGGAGACCTTCATGTaGTACATCATCATCTCATTG +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRSETFM*YIIISL
Trigger: CAATGAGATGATGATGTACCACATGAAGGTCTCCGA...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTCGGAGACCTTCATGTaGTACATCATCATCTCATTG +
Preference number: 4 (lower is better)
Translates to: PRTRGSVPSASGQTSGGLSETFM*YIIISL
Trigger: CAATGAGATGATGATGTACCACATGAAGGTCTCCGA...CAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATCAAAATTGGAGTCAATaGCAGCCACAGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHQNWSQ*QPQAGS
Trigger: GGATCCAGCCTGTGGCTGCCATTGACTCCAATTTTG...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGTGCTCAGGATGGCCATaGACGTGTCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQCSGWP*TCHPRA
Trigger: TGCCCGAGGATGACACGTCCATGGCCATCCTGAGCA...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGTTGAAGATGCGGAGATaGTGGGCCAGGTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRLKMRR*WARSVA
Trigger: GGCCACAGACCTGGCCCACCATCTCCGCATCTTCAA...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGCAACAGCTTGTAGATaGGCATTGCAATGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSATACR*ALQCAP
Trigger: TGGAGCACATTGCAATGCCCATCTACAAGCTGTTGC...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACAGCTCTGCCGCTTTaGGGAACAGGTCCTGCAACA +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRTALPL*GTGPAT
Trigger: TGTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGT...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAAGACAAAGAATGGCTTaGGAAAGACTTGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGRQRMA*ERLAKV
Trigger: CACCTTGGCAAGTCTTTCCCAAGCCATTCTTTGTCT...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp AGTAGTGGTCCTCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGTGCTCAGACAAAGAATaGCTTGGGAAAGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: SSGPQGAFAPRLFLVLPQCSDKE*LGKDLP
Trigger: TGGCAAGTCTTTCCCAAGCCATTCTTTGTCTGAGCA...CTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGAGGACCACTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGGGAGCAAAGATCTGGTaGGGCAGAAATGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSGAKIW*GRNGAR
Trigger: CCTTGCCCCATTTCTGCCCCACCAGATCTTTGCTCC...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GTGTGGTCAGAGGTGCAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTGCTCAAAGGAGCAAAGATCTaGTGGGGCAGAAATGGGGCA +
Preference number: 4 (lower is better)
Translates to: VWSEVQSRAHCSLVTPVLKGAKI*WGRNGA
Trigger: TGCCCCATTTCTGCCCCACCAGATCTTTGCTCCTTT...GAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTATGGATCTTAGAGCATaGATTGTCTTACCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAMDLRA*IVLPAP
Trigger: GGGAGCGGGTAAGACAATCCATGCTCTAAGATCCAT...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp ACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCAAGACAGCGATGAGGATGTaGTGCAGCACCAGGACCATG +
Preference number: 4 (lower is better)
Translates to: TACRLHSSLSLSWPQCTKTAMRM*CSTRTM
Trigger: CATGGTCCTGGTGCTGCACCACATCCTCATCGCTGT...CTTGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR CCA 90 bp GCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCGGACTTTCCCCTCCCCCCGCCTGAGGAATTaGACAACAGCGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: APFLIITQLATVHRTFPSPRLRN*TTAMRM
Trigger: CATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGG...GGAGGGGAAAGTCCGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp GCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCCTCATTGCACATaGCCCCACTCCCACTCACAT +
Preference number: 4 (lower is better)
Translates to: AGTHHPVGRCRQFPLGGAQPHCT*PHSHSH
Trigger: ATGTGAGTGGGAGTGGGGCCATGTGCAATGAGGCTG...TGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541998.5
3UTR CAA 72 bp GATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTaGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: DLRAWIVLPAPC*AQTGEETRPAS
Trigger: TGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR CAA 72 bp AGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTaGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTC +
Preference number: 4 (lower is better)
Translates to: RGTLRGPLRHSG*GSLCLRVAETF
Trigger: GAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR CAA 72 bp TCCTCGTCGAACTTGCTGAACCATGGCCCATTGATCTaGTTCACCAGCTCGGCCACACCGATGACCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSNLLNHGPLI*FTSSATPMTSW
Trigger: CCAGGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTCGACGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCGGCCTGAAATGTCGATaGCAGAGCCCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRGLKCR*QSPDSA
Trigger: TGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCC...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRSTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp CACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: HHPVGRCRQFPLGGAQLTSTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...TGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR TCA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCTGTCCGCTAGCGGCATaGCCAGCACTTGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: KRISLKATQKGKAGGPPPCPLAA*PALGYQ
Trigger: CTGATACCCAAGTGCTGGTCATGCCGCTAGCGGACA...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGCTGTCAAGGGAAAGCTaGCCTCTTCCCCGAGCACTT +
Preference number: 4 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQLSRES*PLPRAL
Trigger: AAGTGCTCGGGGAAGAGGTCAGCTTTCCCTTGACAG...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGCGTCATCCAGGTGGGTaGAGAGGTTCTTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRRHPGG*RGSLPL
Trigger: AAGTGGCAAAGAACCTCTTCACCCACCTGGATGACG...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp AAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTGAGAATGGGCGATGCTaGTGCCGCAGTAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: KLRPRKVVLVQGHTGSPGENGRC*CRSRWR
Trigger: TCTCCATCTACTGCGGCATCAGCATCGCCCATTCTC...ACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGAACGAGGGGTATAGGTaGAACTTGCAAAATTGGAGT +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWENEGYR*NLQNWS
Trigger: ACTCCAATTTTGCAAGTTTCACCTATACCCCTCGTT...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGCCTCGAGGTAGTTGGTaGGCTCCAGGTTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRPRGSW*APGSCR
Trigger: TCTACAAGAACCTGGAGCTCACCAACTACCTCGAGG...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp GGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTAGTGGTGCCTCTCCATaGCGGAGCCCTCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: GAEMGQGETIKLLRQRMASGASP*RSPQSC
Trigger: ACAGCTCTGAGGGCTCCGTCATGGAGAGGCACCACT...AGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGGTCTGTGGCCAAGATaGTGTCCCGCATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQGLWPR*CPASDP
Trigger: TGGATCTGATGCGGGACATCATCTTGGCCACAGACC...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGCTCTTGGGTTTGTGGTaGGGATTAAATGAGATCACA +
Preference number: 4 (lower is better)
Translates to: TRGSVPSASGQTSGGLWELLGLW*GLNEIT
Trigger: TGTGATCTCATTTAATCCTCACCACAAACCCAAGAG...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540345.5
CDS-3UTR GCA 90 bp CAAAGCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAGATGGAGTGGCCGCATaGCTGCCCCATCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: QSGQPTGPYTTVAQSPRKDGVAA*LPHHSS
Trigger: TGAGGAGTGATGGGGCAGGCATGCGGCCACTCCATC...TTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334456.10
CDS-3UTR GCA 90 bp GCAGGGAAGAGGCATCCAGGTCGTAGAGTTCCCCGCACAGTTGGAGGATCTTGCTCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 4 (lower is better)
Translates to: AGKRHPGRRVPRTVGGSCSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...GCAAGATCCTCCAACTGTGCGGGGAACTCTACGACCTGGATGCCTCTTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR GCA 90 bp ACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCGGATCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 4 (lower is better)
Translates to: TACRLHSSLSLSWPQCTGSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...TCCGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541998.5
ENST00000543575.5
CDS-3UTR GCA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTCACCAAGATGACAGCTaGCACGGCCCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: TQGWALCALGLQKHSIASHQDDS*HGPSLL
Trigger: AAGGAGGCTGGGGCCGTGGCAGCTGTCATCTTGGTG...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCCTCAGCTGGCCACAGTaGACCAAGATGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KRISLKATQKGKAGGPPPLSWPQ*TKMTAA
Trigger: GGCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAG...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTACAGTTGGAGGATCTTaGGGTCGCGGTCGGTGTACG +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPTVGGS*GRGRCT
Trigger: CGTACACCGACCGCGACCGCAAGATCCTCCAACTGT...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGTGGAGCACTTTGAGCTaGAGGGAAGAGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRWSTLS*REEASR
Trigger: CCTGGATGCCTCTTCCCTGCAGCTCAAAGTGCTCCA...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCAGCCCAACATGCTCTaGAGCTGTTGTACATCCTCG +
Preference number: 4 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSQPNML*SCCTSS
Trigger: CGAGGATGTACAACAGCTGCAGAGCATGTTGGGCTG...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGACACAGAGCATGGCCTaGAGCTCACAGCCCAACATG +
Preference number: 4 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQTQSMA*SSQPNM
Trigger: CATGTTGGGCTGTGAGCTGCAGGCCATGCTCTGTGT...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGCAGTGCTGGATCACATaGTCGTCCTCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRQCWIT*SSSSVN
Trigger: GTTCACCGACGAGGACGAGCATGTGATCCAGCACTG...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp TCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACCCCAAAGGGCCTGATCGGCCGGGATaGGGATCTCATAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: SLRCLTFPFHEDPGDPKGPDRPG*GSHSSH
Trigger: ATGAGAGCTATGAGATCCGCATCCCGGCCGATCAGG...CCCTTTGGGGTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGCCTGATCGGCCGGGATaGGGATCTCATAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKPDRPG*GSHSSH
Trigger: ATGAGAGCTATGAGATCCGCATCCCGGCCGATCAGG...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCATTGGCCAGGTGGCTaGGATACTGAGCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSHWPGG*DTEPHS
Trigger: TGAATGAGGCTCAGTATCGCAGCCACCTGGCCAATG...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp CCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGGGTATAGGTGAAACTTaGAAAATTGGAGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: PRTRGSVPSASGQTSGGLGIGET*KIGVNG
Trigger: GCCATTGACTCCAATTTTGCAAGTTTCACCTATACC...CAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCGGTATAGGTGAAACTTaGAAAATTGGAGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAGIGET*KIGVNG
Trigger: GCCATTGACTCCAATTTTGCAAGTTTCACCTATACC...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp TCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACCCCAAAGGGGCATCAGATCCAGCATaGGCTGATAGTCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SLRCLTFPFHEDPGDPKGASDPA*ADSPSG
Trigger: CCCGGAAGGACTATCAGCGCATGCTGGATCTGATGC...CCCTTTGGGGTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTTCTCCATCGGCCTGTTaGCCATGGCCTTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPSPSAC*PWPSPG
Trigger: ACCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGA...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp ACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACCAGAGTAGGGCCCACTaGTCATTGGTCACCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TLCSLRCLTFPFHEDPGDQSRAH*SLVTPV
Trigger: CACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTG...GTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCACATTCCATAGCCTCTaGTGGGACTCCGCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRTFHSL*WDSAER
Trigger: TCGCTCTGCGGAGTCCCAGCAGAGGCTATGGAATGT...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGGGGTTGGGCTCTCTGTaGCTTAGGGTTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSGLGSL*LRVAET
Trigger: TGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCC...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCTCCTCACACACCAGCTaGGACTCACCATCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRSSHTS*DSPSSR
Trigger: CCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGA...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp ACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGACATCCTCACACACCAGCTaGGACTCACCATCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: TADRASLTARCRPEMSMTSSHTS*DSPSSR
Trigger: CCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGA...TGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CCA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTCCTCACACACCAGCTaGGACTCACCATCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSSSHTS*DSPSSR
Trigger: CCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGA...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CTCAGAGCTGTAGAGCGCAGCCAGCACAGATTTCGAGGCCACCTGGAAAGAGTTGGCATGACCAGCACTTaGGTATCAGGAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LRAVERSQHRFRGHLERVGMTST*VSGASG
Trigger: TCCACTGGCTCCTGATACCCAAGTGCTGGTCATGCC...AACTCTTTCCAGGTGGCCTCGAAATCTGTGCTGGCTGCGCTCTACAGCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGGGCATGACCAGCACTTaGGTATCAGGAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRGMTST*VSGASG
Trigger: TCCACTGGCTCCTGATACCCAAGTGCTGGTCATGCC...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TCCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCGGTCCTTCAGCTGGATaGACTTCTTGTCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: STACRLHSSLSLSWPQCTGPSAG*TSCLPP
Trigger: TGGTGGAAGACAAGAAGTCCATCCAGCTGAAGGACC...GGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCTCCGTGATGATCTCCTaGAGCAGGACAGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTSVMIS*SRTETS
Trigger: TGACGTCTCTGTCCTGCTCCAGGAGATCATCACGGA...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCACACCGATGACCTCCTaGTTCTCGTTCTTGATGGGG +
Preference number: 4 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTTPMTS*FSFLMG
Trigger: CCCCATCAAGAACGAGAACCAGGAGGTCATCGGTGT...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACGAACTTGCTGAACCATaGCCCATTGATCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDELAEP*PIDLVH
Trigger: GTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTC...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGAACTTGCTGAACCATaGCCCATTGATCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAELAEP*PIDLVH
Trigger: GTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTC...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGGAACTTGCTGAACCATaGCCCATTGATCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: RGSTADRASLTARCRPEMELAEP*PIDLVH
Trigger: GTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTC...CATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTTCGGAGACCTTCATGTaGTACATCATCATCTCATTG +
Preference number: 4 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPSETFM*YIIISL
Trigger: CAATGAGATGATGATGTACCACATGAAGGTCTCCGA...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCATCATGGAGAAGTTTaGTATACTCATCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: PVALFPVHLARPVEGCGRHHGEV*YTHHRR
Trigger: TCTCCGATGATGAGTATACCAAACTTCTCCATGATG...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATATGGCAGCCACAGGCTaGATCCCATCATGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHMAATG*IPSWRS
Trigger: ACTTCTCCATGATGGGATCCAGCCTGTGGCTGCCAT...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp ACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACTGCTCAGGATGGCCATaGACGTGTCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: TLCSLRCLTFPFHEDPGDCSGWP*TCHPRA
Trigger: TGCCCGAGGATGACACGTCCATGGCCATCCTGAGCA...GTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp TCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGAACTAAGGACTGATTTCGAGGCCACCTaGAAAGAGTTGTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SGGLRPAAVSSPPTELRTDFEAT*KELFVP
Trigger: AGGCACAAACAACTCTTTCCAGGTGGCCTCGAAATC...AGTCCTTAGTTCTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTGATTTCGAGGCCACCTaGAAAGAGTTGTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRDFEAT*KELFVP
Trigger: AGGCACAAACAACTCTTTCCAGGTGGCCTCGAAATC...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTACCTCAGCCATCTTCTaGAGGTCCTTGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRTSAIF*RSLKMR
Trigger: CCGCATCTTCAAGGACCTCCAGAAGATGGCTGAGGT...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGTTCCAGCCCTTGGTCTaGTCAGAGAGGTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRFQPLV*SERSQE
Trigger: CTCCTGTGACCTCTCTGACCAGACCAAGGGCTGGAA...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCACAGCTCTGCCGCTTTaGGGAACAGGTCCTGCAACA +
Preference number: 4 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSTALPL*GTGPAT
Trigger: TGTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGT...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGCAGCGAGTTGTTACTTaGGAGGCCGCGGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQQRVVT*EAADGE
Trigger: TTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTG...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CAGGCCATCTTCCCACCAGCTGTGATAAGGGTCTTCAGCCTCATTGCACATGGCACAGCGATGAGGATGTaGTGCAGCACCAGGACCATG +
Preference number: 4 (lower is better)
Translates to: QAIFPPAVIRVFSLIAHGTAMRM*CSTRTM
Trigger: CATGGTCCTGGTGCTGCACCACATCCTCATCGCTGT...GCCATGTGCAATGAGGCTGAAGACCCTTATCACAGCTGGTGGGAAGATGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541998.5
CDS-3UTR CCA 90 bp GGGGGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTCATTATCACTCAGCTaGCCACAGTGCACCGGACTT +
Preference number: 4 (lower is better)
Translates to: GGPHTPAGTHHPVGRCRQSLSLS*PQCTGL
Trigger: AAGTCCGGTGCACTGTGGCCAGCTGAGTGATAATGA...CTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541998.5
ENST00000543575.5
3UTR CAA 72 bp ACTTTGTCTCCGATGACCTTGCAAGAAAGCTGGAGATaGTCCTCCGACACCAGCAGGAGGCAGCAGCGGGAT +
Preference number: 4 (lower is better)
Translates to: TLSPMTLQESWR*SSDTSRRQQRD
Trigger: ATCCCGCTGCTGCCTCCTGCTGGTGTCGGAGGACAATCTCCAGCTTTCTTGCAAGGTCATCGGAGACAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp TTGACAGCACGTTGCAGGCCTGAAATGTCGATGACAGAGCCCAGACTCAGCAAGGGCCTGAAATGTCGATaGCAGAGCCCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: LTARCRPEMSMTEPRLSKGLKCR*QSPDSA
Trigger: TGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCC...CTTGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS-3UTR TCA 90 bp GGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTGGCCTGAAATGTCGATaGCAGAGCCCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: GPHTPAGTHHPVGRCRQFGLKCR*QSPDSA
Trigger: TGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCC...AAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR TCA 90 bp ATAAGGGTCTTCAGCCTCATTGCACATGGCCCCACTCCCACTCACATGCTTCTCAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: IRVFSLIAHGPTPTHMLLSTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...GAGAAGCATGTGAGTGGGAGTGGGGCCATGTGCAATGAGGCTGAAGACCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541998.5
CDS-3UTR TCA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTTGTCCGCTAGCGGCATaGCCAGCACTTGGGTATCAG +
Preference number: 4 (lower is better)
Translates to: TQGWALCALGLQKHSIASCPLAA*PALGYQ
Trigger: CTGATACCCAAGTGCTGGTCATGCCGCTAGCGGACA...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTGTACATCCTCGGAGGTaGGGTCCTTCAGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: TQGWALCALGLQKHSIASVHPRR*GPSAGW
Trigger: CCATCCAGCTGAAGGACCTCACCTCCGAGGATGTAC...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp TGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGCCTGGTTCTCGTTCTTaGTGGGGAAGCAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: WILEHGLSYPLPVWPRQGPGSRS*WGSRGC
Trigger: ACATCCTCTGCTTCCCCATCAAGAACGAGAACCAGG...CCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTGAGAATGGGCGATGCTaGTGCCGCAGTAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSENGRC*CRSRWR
Trigger: TCTCCATCTACTGCGGCATCAGCATCGCCCATTCTC...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCGGTCTGTGGCCAAGATaGTGTCCCGCATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: KRISLKATQKGKAGGPPPGLWPR*CPASDP
Trigger: TGGATCTGATGCGGGACATCATCTTGGCCACAGACC...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp CACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAATTGGACAACAGCGATaGGGATGTGGTGCAGCACCA +
Preference number: 4 (lower is better)
Translates to: HHPVGRCRQFPLGGAQLTIGQQR*GCGAAP
Trigger: TGGTGCTGCACCACATCCTCATCGCTGTTGTCCAAT...TGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR GCA 90 bp GGGACTCCGCAGAGCGATAGAGCTATTTTAGACATTGATCTAAAATGGATCTTAGCTCTGCTGCCCCGCTaGTCCCGCCTCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GTPQSDRAILDIDLKWILALLPR*SRLSRC
Trigger: GCAGCGGGAGAGGCGGGAGCAGCGGGGCAGCAGAGC...TAAGATCCATTTTAGATCAATGTCTAAAATAGCTCTATCGCTCTGCGGAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334456.10
CDS-3UTR GCA 90 bp GCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCATCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 4 (lower is better)
Translates to: AGTHHPVGRCRQFPLGGASLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...TGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR GCA 90 bp GGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGTCCTTGACAGCACGTTaGAGGCCTGAAATGTCGATG +
Preference number: 4 (lower is better)
Translates to: GTHHPVGRCRQFPLGGAQSLTAR*RPEMSM
Trigger: CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGA...CTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR GCA 90 bp TGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCGGACTTTCCTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 4 (lower is better)
Translates to: CRLHSSLSLSWPQCTGLSCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...GGAAAGTCCGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000541998.5
ENST00000543575.5
CDS-3UTR GCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGTGCTTCTCCACCGCCTaGAGGCTCCATTCCTCATTA +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRCFSTA*RLHSSL
Trigger: TAATGAGGAATGGAGCCTGCAGGCGGTGGAGAAGCA...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTTGGAGCACTTTGAGCTaGAGGGAAGAGGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSWSTLS*REEASR
Trigger: CCTGGATGCCTCTTCCCTGCAGCTCAAAGTGCTCCA...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCCAGCCCAACATGCTCTaGAGCTGTTGTACATCCTCG +
Preference number: 4 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSQPNML*SCCTSS
Trigger: CGAGGATGTACAACAGCTGCAGAGCATGTTGGGCTG...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCCACAGAGCAGATCTCTaGGTTGCTGAGGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRHRADL*VAEVSG
Trigger: GCCAGAAACCTCAGCAACGCAGAGATCTGCTCTGTG...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGAAGCGGATGGGCATATaGGTCAGGGATGTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSKRMGI*VRDVQD
Trigger: ATCCTGAACATCCCTGACGCATATGCCCATCCGCTT...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp AGTAGTGGTCCTCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGGGTATAGGTGAAACTTaGAAAATTGGAGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: SSGPQGAFAPRLFLVLPQGIGET*KIGVNG
Trigger: GCCATTGACTCCAATTTTGCAAGTTTCACCTATACC...CTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGAGGACCACTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCGGTATAGGTGAAACTTaGAAAATTGGAGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGGIGET*KIGVNG
Trigger: GCCATTGACTCCAATTTTGCAAGTTTCACCTATACC...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR GCA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTGCATCAGATCCAGCATaGGCTGATAGTCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSASDPA*ADSPSG
Trigger: CCCGGAAGGACTATCAGCGCATGCTGGATCTGATGC...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGATGGGCATTGCAATGTaGTCCATGAAGCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: PASHRQEEAWLAHSYLGLMGIAM*SMKLIC
Trigger: GCAAATCAGCTTCATGGAGCACATTGCAATGCCCAT...CAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTCATTGGTCACCCCTGTaGTCTCAGAAAACAAATTAC +
Preference number: 4 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSHWSPL*SQKTNY
Trigger: GTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATG...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACCCCAGGGCCCCTCTCTaGAGAGCACTGAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDPRAPL*RALSCP
Trigger: GGGGCAGCTCAGTGCTCTGCAGAGAGGGGCCCTGGG...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACGGGCCTGTCTCCCAGTaGGGGGATCCCTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDGPVSQ*GDPSCP
Trigger: TGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCC...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp ACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACGGCATGACCAGCACTTaGGTATCAGGAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: TLCSLRCLTFPFHEDPGDGMTST*VSGASG
Trigger: TCCACTGGCTCCTGATACCCAAGTGCTGGTCATGCC...GTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR CCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGCTGCAGGTATTaGAGCACTTTGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKSCCRY*STLSCR
Trigger: CCTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGA...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCGGTCCTTCAGCTGGATaGACTTCTTGTCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTGPSAG*TSCLPP
Trigger: TGGTGGAAGACAAGAAGTCCATCCAGCTGAAGGACC...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGGGTCCTTCAGCTGGATaGACTTCTTGTCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRGPSAG*TSCLPP
Trigger: TGGTGGAAGACAAGAAGTCCATCCAGCTGAAGGACC...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGTCCGTGATGATCTCCTaGAGCAGGACAGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRSVMIS*SRTETS
Trigger: TGACGTCTCTGTCCTGCTCCAGGAGATCATCACGGA...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTCCCCGTCGAACACCTTaGCCACCAGCTCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPPRRTP*PPAHSD
Trigger: ATCAGAATGAGCTGGTGGCCAAGGTGTTCGACGGGG...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGTTGTATAGGAGAGAATaGGCGATGCTGATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRLYRRE*AMLMPQ
Trigger: CTGCGGCATCAGCATCGCCCATTCTCTCCTATACAA...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGCATCATGGAGAAGTTTaGTATACTCATCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVHHGEV*YTHHRR
Trigger: TCTCCGATGATGAGTATACCAAACTTCTCCATGATG...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CCA 90 bp CCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCAGATTTCGAGGCCACCTaGAAAGAGTTGTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: PPPAGSIPHYHSAGHSAPDFEAT*KELFVP
Trigger: AGGCACAAACAACTCTTTCCAGGTGGCCTCGAAATC...TGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp TGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGATGTTGCAGCCGTaGGTGTTGAGGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: WILEHGLSYPLPVWPRQGKMLQP*VLRMAM
Trigger: CATCGCCATCCTCAACACCCACGGCTGCAACATCTT...CCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCCAGCGAGTTGTTACTTaGGAGGCCGCGGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: KRISLKATQKGKAGGPPPQRVVT*EAADGE
Trigger: TTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTG...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCCTGGTGGGGCAGAAATaGGGCAAGGAGAAACCATCA +
Preference number: 4 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRLVGQK*GKEKPS
Trigger: TGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAG...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp ATAAGGGTCTTCAGCCTCATTGCACATGGCCCCACTCCCACTCACATGCTTCTCCCCCGCCTGAGGAATTaGACAACAGCGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: IRVFSLIAHGPTPTHMLLPRLRN*TTAMRM
Trigger: CATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGG...GAGAAGCATGTGAGTGGGAGTGGGGCCATGTGCAATGAGGCTGAAGACCCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541998.5
CDS-3UTR CCA 90 bp CAAAGCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAATTGAGGAAGACCTGCTaGCCCCGCCTGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: QSGQPTGPYTTVAQSPRKLRKTC*PRLRNW
Trigger: CCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAA...TTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGCAAGGGGGTCCAGGCTaGCTGCAGGCTGTCGGCGCA +
Preference number: 4 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQQGGPG*LQAVGA
Trigger: TGCGCCGACAGCCTGCAGCCAGCCTGGACCCCCTTG...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTCCTGGTTCTCGTTCTTaGTGGGGAAGCAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPPGSRS*WGSRGC
Trigger: ACATCCTCTGCTTCCCCATCAAGAACGAGAACCAGG...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGTCCTTCCGGGAGAAATaGTCAAAGATGTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQSFREK*SKMLQP
Trigger: CGGCTGCAACATCTTTGATCATTTCTCCCGGAAGGA...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp CACTGCTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTCCTGCTGGCCCCGCCTaGGGAATTGGACAACAGCGA +
Preference number: 4 (lower is better)
Translates to: HCSLVTPVLSENKLQSLRPAGPA*GIGQQR
Trigger: TCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGG...ACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp CAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTACTCAGCTGGCCACAGTaGACCAAGATGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QSRAHCSLVTPVLSENKLLSWPQ*TKMTAA
Trigger: GGCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAG...TAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR GCA 90 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTCGCTGCTGCAGGACCTaGACCCTCCGCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: LDIDLKWILEHGLSYPLPRCCRT*TLRRAT
Trigger: GGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCG...AGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTCAGCCCAACATGCTCTaGAGCTGTTGTACATCCTCG +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPQPNML*SCCTSS
Trigger: CGAGGATGTACAACAGCTGCAGAGCATGTTGGGCTG...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGGCTCACAGCCCAACATaGTCTGCAGCTGTTGTACAT +
Preference number: 4 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRAHSPT*SAAVVH
Trigger: ATGTACAACAGCTGCAGAGCATGTTGGGCTGTGAGC...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp ACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGACAGGTGAAGAGGTTCTTTaGCACTTGGAGAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TADRASLTARCRPEMSMTGEEVL*HLEKSL
Trigger: CAGGCTCTTCTCCAAGTGGCAAAGAACCTCTTCACC...TGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGAAGCGGATGGGCATATaGGTCAGGGATGTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKKRMGI*VRDVQD
Trigger: ATCCTGAACATCCCTGACGCATATGCCCATCCGCTT...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCGGAAAGAGTTGTTTGTaGCTCTGTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTGKSCL*LCGPGH
Trigger: ATGACCTGGACCACAGAGGCACAAACAACTCTTTCC...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CCAGGTCCCAATCCCACCATCAGTATAGTAGTGGTCCTCAGGGGGCCTTCGCCCCATTGGTCACCCCTGTaGTCTCAGAAAACAAATTAC +
Preference number: 4 (lower is better)
Translates to: PGPNPTISIVVVLRGPSPHWSPL*SQKTNY
Trigger: GTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATG...GGGCGAAGGCCCCCTGAGGACCACTACTATACTGATGGTGGGATTGGGACCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCGGCTTGGGAAAGACTTaGCAAGGTGTGGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: KRISLKATQKGKAGGPPPGLGKT*QGVVRG
Trigger: ACCTCTGACCACACCTTGGCAAGTCTTTCCCAAGCC...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGAGAAACCATCAAGCTaGTCAGACAAAGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: EKKREASGRADPRVPALWEKPSS*SDKEWL
Trigger: AAGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTC...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATGAGAAACCATCAAGCTaGTCAGACAAAGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHEKPSS*SDKEWL
Trigger: AAGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTC...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTACATTCCATAGCCTCTaGTGGGACTCCGCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: GAEMGQGETIKLLRQRMATFHSL*WDSAER
Trigger: TCGCTCTGCGGAGTCCCAGCAGAGGCTATGGAATGT...AGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTTCCTCACACACCAGCTaGGACTCACCATCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GAEMGQGETIKLLRQRMASSHTS*DSPSSR
Trigger: CCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGA...AGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGACCTTGCAAGAAAGCTaGAGATTGTCCTCCGACACC +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKTLQES*RLSSDT
Trigger: GGTGTCGGAGGACAATCTCCAGCTTTCTTGCAAGGT...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCACCTTGCAAGAAAGCTaGAGATTGTCCTCCGACACC +
Preference number: 4 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSTLQES*RLSSDT
Trigger: GGTGTCGGAGGACAATCTCCAGCTTTCTTGCAAGGT...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGGGTCCTTCAGCTGGATaGACTTCTTGTCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKGPSAG*TSCLPP
Trigger: TGGTGGAAGACAAGAAGTCCATCCAGCTGAAGGACC...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCTGACAGTGAGGTCCTTCAGCTaGATGGACTTCTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HHPVGRCRQFPLGGAQLTVRSFS*MDFLSS
Trigger: GGAAGACAAGAAGTCCATCCAGCTGAAGGACCTCAC...TGTCAGCTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp TCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACCCCAAAGGGAGGTTCTTTGCCACTTaGAGAAGAGCCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: SLRCLTFPFHEDPGDPKGRFFAT*RRAWHS
Trigger: TGAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCT...CCCTTTGGGGTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp AAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTAGGTTCTTTGCCACTTaGAGAAGAGCCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: KLRPRKVVLVQGHTGSPGRFFAT*RRAWHS
Trigger: TGAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCT...ACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTTCCGTGATGATCTCCTaGAGCAGGACAGAGACGTCA +
Preference number: 4 (lower is better)
Translates to: GPHTPAGTHHPVGRCRQFSVMIS*SRTETS
Trigger: TGACGTCTCTGTCCTGCTCCAGGAGATCATCACGGA...AAACTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp ATCTGGTGGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGCCCCGTCGAACACCTTaGCCACCAGCTCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: IWWGRNGARRNHQAAQTKPRRTP*PPAHSD
Trigger: ATCAGAATGAGCTGGTGGCCAAGGTGTTCGACGGGG...CTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTTCAGGATCTGGCCCGTaGTCGCCACGTGTCCCGCGA +
Preference number: 4 (lower is better)
Translates to: TPVLSENKLQSLREVGSLSGSGP*SPRVPR
Trigger: TCGCGGGACACGTGGCGACCACGGGCCAGATCCTGA...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATTCGGAGACCTTCATGTaGTACATCATCATCTCATTG +
Preference number: 4 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHSETFM*YIIISL
Trigger: CAATGAGATGATGATGTACCACATGAAGGTCTCCGA...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGCATCATGGAGAAGTTTaGTATACTCATCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQHHGEV*YTHHRR
Trigger: TCTCCGATGATGAGTATACCAAACTTCTCCATGATG...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGCAAAATTGGAGTCAATaGCAGCCACAGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKQNWSQ*QPQAGS
Trigger: GGATCCAGCCTGTGGCTGCCATTGACTCCAATTTTG...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp AAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCAGAGGAGAAGTCTGTaGTGCTGCTTGTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: KLRPRKVVLVQGHTGSPGQRRSL*CCLLFR
Trigger: CCGAAACAACAAGCAGCACCACAGACTTCTCCTCTG...ACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTGCAACAGCTTGTAGATaGGCATTGCAATGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRATACR*ALQCAP
Trigger: TGGAGCACATTGCAATGCCCATCTACAAGCTGTTGC...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CAAAGCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACAGCTCTGCCGCTTTaGGGAACAGGTCCTGCAACA +
Preference number: 4 (lower is better)
Translates to: QSGQPTGPYTTVAQSPRKTALPL*GTGPAT
Trigger: TGTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGT...TTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGATCCAGTGCTCACGGTTaGAGGCCACGCGCTCGTACA +
Preference number: 4 (lower is better)
Translates to: LKWILEHGLSYPLPVWPRSSAHG*RPRART
Trigger: TGTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGA...TCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTCGGATGGTGAACTTGTaGGACACCTTGGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GAEMGQGETIKLLRQRMARMVNL*DTLVQC
Trigger: GCACTGGACCAAGGTGTCCCACAAGTTCACCATCCG...AGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CAAAGCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAACGGATGGTGAACTTGTaGGACACCTTGGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: QSGQPTGPYTTVAQSPRKRMVNL*DTLVQC
Trigger: GCACTGGACCAAGGTGTCCCACAAGTTCACCATCCG...TTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAGGGCCCACTGCTCATTaGTCACCCCTGTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PRDHIRQLHRVLEKRISLGPTAH*SPLCSQ
Trigger: CTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCC...TAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CAGAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATTGCTCAGACAAAGAATaGCTTGGGAAAGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: QRKREKPVAGLTQESRPYCSDKE*LGKDLP
Trigger: TGGCAAGTCTTTCCCAAGCCATTCTTTGTCTGAGCA...ATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTCCCCGCCTGAGGAATTaGACAACAGCGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: TQGWALCALGLQKHSIASPRLRN*TTAMRM
Trigger: CATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGG...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTTCATTATCACTCAGCTaGCCACAGTGCACCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSSLSLS*PQCTCR
Trigger: CCTGCAGGTGCACTGTGGCCAGCTGAGTGATAATGA...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418754.6
3UTR CAA 72 bp CCTGTCAAGGGAAAGCTGACCTCTTCCCCGAGCACTTaGTCTCCGATGACCTTGCAAGAAAGCTGGAGATTG +
Preference number: 4 (lower is better)
Translates to: PVKGKLTSSPST*SPMTLQESWRL
Trigger: CAATCTCCAGCTTTCTTGCAAGGTCATCGGAGACAAAGTGCTCGGGGAAGAGGTCAGCTTTCCCTTGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR TCA 90 bp CCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAGTACATCCTCGGAGGTaGGGTCCTTCAGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: PRDHIRQLHRVLEKRISLVHPRR*GPSAGW
Trigger: CCATCCAGCTGAAGGACCTCACCTCCGAGGATGTAC...TAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGGCCAGGGTGCTGGTaGGCACGGTGCTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDRPGCW*ARCWCS
Trigger: ACTACACCAGCACCGTGCTCACCAGCACCCTGGCCT...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGCTGTGGTCCAGGTCATaGCACATGCAGGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKLWSRS*HMQEIN
Trigger: GTTTATTTCCTGCATGTGTCATGACCTGGACCACAG...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGCTCTCTGCAGAGCACTaGGCTGCCCCTCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQLSAEH*AAPLAA
Trigger: AGCTGCCAGAGGGGCAGCTCAGTGCTCTGCAGAGAG...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTGGTGAAGAGGTTCTTTaGCACTTGGAGAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSGEEVL*HLEKSL
Trigger: CAGGCTCTTCTCCAAGTGGCAAAGAACCTCTTCACC...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCAAGCGGATGGGCATATaGGTCAGGGATGTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: KRISLKATQKGKAGGPPPKRMGI*VRDVQD
Trigger: ATCCTGAACATCCCTGACGCATATGCCCATCCGCTT...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTCATTGGCCAGGTGGCTaGGATACTGAGCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: TQGWALCALGLQKHSIASHWPGG*DTEPHS
Trigger: TGAATGAGGCTCAGTATCGCAGCCACCTGGCCAATG...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGGGAAAGAGTTGTTTGTaGCTCTGTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKGKSCL*LCGPGH
Trigger: ATGACCTGGACCACAGAGGCACAAACAACTCTTTCC...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATATGGGCATTGCAATGTaGTCCATGAAGCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHMGIAM*SMKLIC
Trigger: GCAAATCAGCTTCATGGAGCACATTGCAATGCCCAT...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCATGGGCATTGCAATGTaGTCCATGAAGCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTMGIAM*SMKLIC
Trigger: GCAAATCAGCTTCATGGAGCACATTGCAATGCCCAT...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTATGGGCATTGCAATGTaGTCCATGAAGCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRMGIAM*SMKLIC
Trigger: GCAAATCAGCTTCATGGAGCACATTGCAATGCCCAT...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGTCATTATCACTCAGCTaGCCACAGTGCACCAAGATG +
Preference number: 4 (lower is better)
Translates to: WILEHGLSYPLPVWPRQGSLSLS*PQCTKM
Trigger: CATCTTGGTGCACTGTGGCCAGCTGAGTGATAATGA...CCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp TCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACCCCAAAGGGTCATTATCACTCAGCTaGCCACAGTGCACCAAGATG +
Preference number: 4 (lower is better)
Translates to: SLRCLTFPFHEDPGDPKGSLSLS*PQCTKM
Trigger: CATCTTGGTGCACTGTGGCCAGCTGAGTGATAATGA...CCCTTTGGGGTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR CCA 90 bp ACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGACATCATTATCACTCAGCTaGCCACAGTGCACCAAGATG +
Preference number: 4 (lower is better)
Translates to: TADRASLTARCRPEMSMTSLSLS*PQCTKM
Trigger: CATCTTGGTGCACTGTGGCCAGCTGAGTGATAATGA...TGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp AAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTACTTGGAGAAGAGCCTaGCACTCACACTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: KLRPRKVVLVQGHTGSPGTWRRA*HSHLSF
Trigger: GAAACTCAAGTGTGAGTGCCAGGCTCTTCTCCAAGT...ACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCAGGTTCTTTGCCACTTaGAGAAGAGCCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: KRISLKATQKGKAGGPPPRFFAT*RRAWHS
Trigger: TGAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCT...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGACATCATCATCTCATTaGCCAGGTGGCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKTSSSH*PGGCDT
Trigger: AGTATCGCAGCCACCTGGCCAATGAGATGATGATGT...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCACATCATCATCTCATTaGCCAGGTGGCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRTSSSH*PGGCDT
Trigger: AGTATCGCAGCCACCTGGCCAATGAGATGATGATGT...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp TCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGAACTAAGGACTCATCATGGAGAAGTTTaGTATACTCATCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: SGGLRPAAVSSPPTELRTHHGEV*YTHHRR
Trigger: TCTCCGATGATGAGTATACCAAACTTCTCCATGATG...AGTCCTTAGTTCTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTATGGCAGCCACAGGCTaGATCCCATCATGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: TQGWALCALGLQKHSIASMAATG*IPSWRS
Trigger: ACTTCTCCATGATGGGATCCAGCCTGTGGCTGCCAT...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATATGGCAGCCACAGGCTaGATCCCATCATGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GQPTGPYTTVAQSPRKTHMAATG*IPSWRS
Trigger: ACTTCTCCATGATGGGATCCAGCCTGTGGCTGCCAT...ATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGGATTTCGAGGCCACCTaGAAAGAGTTGTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKDFEAT*KELFVP
Trigger: AGGCACAAACAACTCTTTCCAGGTGGCCTCGAAATC...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTTGCTCAGACAAAGAATaGCTTGGGAAAGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRCSDKE*LGKDLP
Trigger: TGGCAAGTCTTTCCCAAGCCATTCTTTGTCTGAGCA...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp TCAAAGGGAAAGGAGCAAAGATCTGGTGGGGCAGAAATGGGGCAAGGAGAAACCCTGGTGGGGCAGAAATaGGGCAAGGAGAAACCATCA +
Preference number: 4 (lower is better)
Translates to: SKGKEQRSGGAEMGQGETLVGQK*GKEKPS
Trigger: TGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAG...GGTTTCTCCTTGCCCCATTTCTGCCCCACCAGATCTTTGCTCCTTTCCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGATGGATCTTAGAGCATaGATTGTCTTACCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKMDLRA*IVLPAP
Trigger: GGGAGCGGGTAAGACAATCCATGCTCTAAGATCCAT...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCGACATTGATCTAAAATaGATCTTAGAGCATGGATTG +
Preference number: 4 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGDIDLK*ILEHGL
Trigger: CAATCCATGCTCTAAGATCCATTTTAGATCAATGTC...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACACTGGCTGCAGGAATaGGTAAGGGGCTCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LKWILEHGLSYPLPVWPRHWLQE*VRGSGQ
Trigger: TTGGCCTGAGCCCCTTACCCATTCCTGCAGCCAGTG...TCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGAACGAGGGGTATAGGTaGAACTTGCAAAATTGGAGT +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRNEGYR*NLQNWS
Trigger: ACTCCAATTTTGCAAGTTTCACCTATACCCCTCGTT...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTAACGAGGGGTATAGGTaGAACTTGCAAAATTGGAGT +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRNEGYR*NLQNWS
Trigger: ACTCCAATTTTGCAAGTTTCACCTATACCCCTCGTT...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTCTGTGGTCCAGGTCATaGCACATGCAGGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPLWSRS*HMQEIN
Trigger: GTTTATTTCCTGCATGTGTCATGACCTGGACCACAG...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTTCCTTCCGGGAGAAATaGTCAAAGATGTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: TQGWALCALGLQKHSIASSFREK*SKMLQP
Trigger: CGGCTGCAACATCTTTGATCATTTCTCCCGGAAGGA...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTTGGGAAAGACTTGGTCTGTGGCCAAGATaGTGTCCCGCATCAGATCCA +
Preference number: 4 (lower is better)
Translates to: GQGETIKLLRQRMAWERLGLWPR*CPASDP
Trigger: TGGATCTGATGCGGGACATCATCTTGGCCACAGACC...AAGTCTTTCCCAAGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp CTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGATCTTCTGGAGGTCCTTaGAGATGCGGAGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: LKWILEHGLSYPLPVWPRSSGGP*RCGDGG
Trigger: CCCACCATCTCCGCATCTTCAAGGACCTCCAGAAGA...TCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp CCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTATCTTCTGGAGGTCCTTaGAGATGCGGAGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: PRDHIRQLHRVLEKRISLSSGGP*RCGDGG
Trigger: CCCACCATCTCCGCATCTTCAAGGACCTCCAGAAGA...TAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGCACCAAGATGACAGCTaGCACGGCCCCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQHQDDS*HGPSLL
Trigger: AAGGAGGCTGGGGCCGTGGCAGCTGTCATCTTGGTG...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp CTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGTGCTGGATCACATaGTCGTCCTCGTCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: LKWILEHGLSYPLPVWPRQCWIT*SSSSVN
Trigger: GTTCACCGACGAGGACGAGCATGTGATCCAGCACTG...TCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTATGAAATTCATGTCCTaGAGCATGCTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPMKFMS*SMLRMA
Trigger: GGCCATCCTGAGCATGCTGCAGGACATGAATTTCAT...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTATGAAATTCATGTCCTaGAGCATGCTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSMKFMS*SMLRMA
Trigger: GGCCATCCTGAGCATGCTGCAGGACATGAATTTCAT...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGAAAGAGTTGTTTGTaGCTCTGTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPGKSCL*LCGPGH
Trigger: ATGACCTGGACCACAGAGGCACAAACAACTCTTTCC...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp TCGTCGAACTTGCTGAACCATGGCCCATTGATCTTGTTCACCAGCTCGGCCACAGGAAAGAGTTGTTTGTaGCTCTGTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SSNLLNHGPLILFTSSATGKSCL*LCGPGH
Trigger: ATGACCTGGACCACAGAGGCACAAACAACTCTTTCC...TGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTCGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACGCGCTCGTACAGCTCTaGCGCTTTGGGGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDALVQL*RFGEQV
Trigger: GACCTGTTCCCCAAAGCGGCAGAGCTGTACGAGCGC...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTCATTGGTCACCCCTGTaGTCTCAGAAAACAAATTAC +
Preference number: 4 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRHWSPL*SQKTNY
Trigger: GTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATG...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACGGCTTGAGGAAGACCTaGTGGCCCCGCCTGAGGAAT +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDGLRKT*WPRLRN
Trigger: ATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCC...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAAGGTATCAGGAGCCAGTaGAGCCACCAGCCTGGCCAA +
Preference number: 4 (lower is better)
Translates to: RQLHRVLEKRISLKATQKGIRSQ*SHQPGQ
Trigger: TTGGCCAGGCTGGTGGCTCCACTGGCTCCTGATACC...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTTCATTATCACTCAGCTaGCCACAGTGCACCAAGATG +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPSLSLS*PQCTKM
Trigger: CATCTTGGTGCACTGTGGCCAGCTGAGTGATAATGA...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGTTCCCCGCACAGTTaGAGGATCTTGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDSSPHS*RILRSR
Trigger: CCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACT...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGAGTTCCCCGCACAGTTaGAGGATCTTGCGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQSSPHS*RILRSR
Trigger: CCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACT...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTACCTTGCAAGAAAGCTaGAGATTGTCCTCCGACACC +
Preference number: 4 (lower is better)
Translates to: TQGWALCALGLQKHSIASTLQES*RLSSDT
Trigger: GGTGTCGGAGGACAATCTCCAGCTTTCTTGCAAGGT...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GAAAGAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATATCAGGATCTGGCCCGTaGTCGCCACGTGTCCCGCGA +
Preference number: 4 (lower is better)
Translates to: ERNRFILMYKAVSPRDHISGSGP*SPRVPR
Trigger: TCGCGGGACACGTGGCGACCACGGGCCAGATCCTGA...TATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp ATCTGGTGGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGTTGTATAGGAGAGAATaGGCGATGCTGATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: IWWGRNGARRNHQAAQTKLYRRE*AMLMPQ
Trigger: CTGCGGCATCAGCATCGCCCATTCTCTCCTATACAA...CTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CAAAGCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAATTGTATAGGAGAGAATaGGCGATGCTGATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: QSGQPTGPYTTVAQSPRKLYRRE*AMLMPQ
Trigger: CTGCGGCATCAGCATCGCCCATTCTCTCCTATACAA...TTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGTCGGAGACCTTCATGTaGTACATCATCATCTCATTG +
Preference number: 4 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRSETFM*YIIISL
Trigger: CAATGAGATGATGATGTACCACATGAAGGTCTCCGA...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTGATTTCGAGGCCACCTaGAAAGAGTTGTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSDFEAT*KELFVP
Trigger: AGGCACAAACAACTCTTTCCAGGTGGCCTCGAAATC...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGCAACAGCTTGTAGATaGGCATTGCAATGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPATACR*ALQCAP
Trigger: TGGAGCACATTGCAATGCCCATCTACAAGCTGTTGC...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGTCCAGTGCTCACGGTTaGAGGCCACGCGCTCGTACA +
Preference number: 4 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQSSAHG*RPRART
Trigger: TGTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGA...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp TCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACCCCAAAGGGAGACAAAGAATGGCTTaGGAAAGACTTGCCAAGGTG +
Preference number: 4 (lower is better)
Translates to: SLRCLTFPFHEDPGDPKGRQRMA*ERLAKV
Trigger: CACCTTGGCAAGTCTTTCCCAAGCCATTCTTTGTCT...CCCTTTGGGGTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTACTGGTGGGGCAGAAATaGGGCAAGGAGAAACCATCA +
Preference number: 4 (lower is better)
Translates to: QSRAHCSLVTPVLSENKLLVGQK*GKEKPS
Trigger: TGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAG...TAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CAGTATAGTAGTGGTCCTTCCGGGAGAAATGATCAAAGATGTTGCAGCCGTGGGAGGCAGGAGGAAGCATaGCTGGCTCATTCATACCTG +
Preference number: 4 (lower is better)
Translates to: QYSSGPSGRNDQRCCSRGRQEEA*LAHSYL
Trigger: CAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCT...CCCACGGCTGCAACATCTTTGATCATTTCTCCCGGAAGGACCACTACTATACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp CACTGCTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTTACCCGCTCCCTGTTTaGCCCAGACAGGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HCSLVTPVLSENKLQSLRYPLPV*PRQGKR
Trigger: TCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTA...ACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp CACTGCTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: HCSLVTPVLSENKLQSLRSTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...ACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp CACTGCTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTCTGTCAAGGGAAAGCTaGCCTCTTCCCCGAGCACTT +
Preference number: 4 (lower is better)
Translates to: HCSLVTPVLSENKLQSLRLSRES*PLPRAL
Trigger: AAGTGCTCGGGGAAGAGGTCAGCTTTCCCTTGACAG...ACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR TCA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGCTCCTTCTAGCTTGTTaGAGGCGCAGGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQLLLAC*RRRPRP
Trigger: TGGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAG...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTCTGTGGTCCAGGTCATaGCACATGCAGGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: TQGWALCALGLQKHSIASLWSRS*HMQEIN
Trigger: GTTTATTTCCTGCATGTGTCATGACCTGGACCACAG...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GAAAGAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACTCTCTGCAGAGCACTaGGCTGCCCCTCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ERNRFILMYKAVSPRDHILSAEH*AAPLAA
Trigger: AGCTGCCAGAGGGGCAGCTCAGTGCTCTGCAGAGAG...TATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTACAGTTGGAGGATCTTaGGGTCGCGGTCGGTGTACG +
Preference number: 4 (lower is better)
Translates to: TPVLSENKLQSLREVGSLTVGGS*GRGRCT
Trigger: CGTACACCGACCGCGACCGCAAGATCCTCCAACTGT...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAACAGAGTAGGGCCCACTaGTCATTGGTCACCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RQLHRVLEKRISLKATQKQSRAH*SLVTPV
Trigger: CACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTG...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp CCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTGCTAGGTGTGGTCAGAGGTaGAGAGTAGGGCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: PVLSENKLQSLREVGSLARCGQR*RVGPTA
Trigger: AGCAGTGGGCCCTACTCTGCACCTCTGACCACACCT...AGCAAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp TGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGGAGAAACCATCAAGCTaGTCAGACAAAGAATGGCTT +
Preference number: 4 (lower is better)
Translates to: WILEHGLSYPLPVWPRQGEKPSS*SDKEWL
Trigger: AAGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTC...CCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp TCATCGGAGACCTTCATGTGGTACATCATCATCTCATTGGCCAGGTGGCTGCGAACTTGGAGAAGAGCCTaGCACTCACACTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SSETFMWYIIISLARWLRTWRRA*HSHLSF
Trigger: GAAACTCAAGTGTGAGTGCCAGGCTCTTCTCCAAGT...TCGCAGCCACCTGGCCAATGAGATGATGATGTACCACATGAAGGTCTCCGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGAACTTGCTGAACCATaGCCCATTGATCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPELAEP*PIDLVH
Trigger: GTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTC...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GTTTCCAAGATGCCACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGACATCATCATCTCATTaGCCAGGTGGCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: VSKMPHSAHSDVSPSPSMTSSSH*PGGCDT
Trigger: AGTATCGCAGCCACCTGGCCAATGAGATGATGATGT...CATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGTGGCATCTTGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTGCTTGCTCAGGATGGCCATaGACGTGTCATCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PVLSENKLQSLREVGSLACSGWP*TCHPRA
Trigger: TGCCCGAGGATGACACGTCCATGGCCATCCTGAGCA...AGCAAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAAGCAGGGAAGTGTCCCTaGAGGGGATCACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: RQLHRVLEKRISLKATQKAGKCP*RGSLSI
Trigger: GATGCTGAGTGATCCCCTCCAGGGACACTTCCCTGC...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGGCAGGGAAGTGTCCCTaGAGGGGATCACTCAGCATC +
Preference number: 4 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQAGKCP*RGSLSI
Trigger: GATGCTGAGTGATCCCCTCCAGGGACACTTCCCTGC...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CACTGCTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGGAGCAAAGATCTGGTaGGGCAGAAATGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: HCSLVTPVLSENKLQSLRGAKIW*GRNGAR
Trigger: CCTTGCCCCATTTCTGCCCCACCAGATCTTTGCTCC...ACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GAAAGAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACTGGCAGCTTCTTCCTaGGGCCCCTGTATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: ERNRFILMYKAVSPRDHILAASS*GPCIPQ
Trigger: CTGGGGGATACAGGGGCCCCAGGAAGAAGCTGCCAG...TATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTGACATTGATCTAAAATaGATCTTAGAGCATGGATTG +
Preference number: 4 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRDIDLK*ILEHGL
Trigger: CAATCCATGCTCTAAGATCCATTTTAGATCAATGTC...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR CAA 72 bp AGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTaGGGAAAGACTTGCCAAGGTGTGGTCAGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RRNHQAAQTKNG*GKTCQGVVRGA
Trigger: TGCACCTCTGACCACACCTTGGCAAGTCTTTCCCAAGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: TPVLSENKLQSLREVGSLSTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGCACGTTGCAGGCCTaGAATGTCGATGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDSTLQA*NVDDRA
Trigger: GGCTCTGTCATCGACATTTCAGGCCTGCAACGTGCT...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp CACTGCTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTCCTGGTTCTCGTTCTTaGTGGGGAAGCAGAGGATGT +
Preference number: 4 (lower is better)
Translates to: HCSLVTPVLSENKLQSLRPGSRS*WGSRGC
Trigger: ACATCCTCTGCTTCCCCATCAAGAACGAGAACCAGG...ACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTGAGAATGGGCGATGCTaGTGCCGCAGTAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: TPVLSENKLQSLREVGSLENGRC*CRSRWR
Trigger: TCTCCATCTACTGCGGCATCAGCATCGCCCATTCTC...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACCCTGATCGGCCGGGATaGGGATCTCATAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDPDRPG*GSHSSH
Trigger: ATGAGAGCTATGAGATCCGCATCCCGGCCGATCAGG...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATATGGGCATTGCAATGTaGTCCATGAAGCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: GQPTGPYTTVAQSPRKTHMGIAM*SMKLIC
Trigger: GCAAATCAGCTTCATGGAGCACATTGCAATGCCCAT...ATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGACACCTTGGTCCAGTaGTCACGGTTGGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: LDIDLKWILEHGLSYPLPDTLVQ*SRLEAT
Trigger: CGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTC...AGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACGGCATGACCAGCACTTaGGTATCAGGAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDGMTST*VSGASG
Trigger: TCCACTGGCTCCTGATACCCAAGTGCTGGTCATGCC...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CACTGCTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTTCCTGCTGCAGGTATTaGAGCACTTTGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HCSLVTPVLSENKLQSLRSCCRY*STLSCR
Trigger: CCTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGA...ACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR CCA 90 bp CCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAGTGAGGTCCTTCAGCTaGATGGACTTCTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PRDHIRQLHRVLEKRISLVRSFS*MDFLSS
Trigger: GGAAGACAAGAAGTCCATCCAGCTGAAGGACCTCAC...TAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAAAATTGGAGTCAATaGCAGCCACAGGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: LKWILEHGLSYPLPVWPRQNWSQ*QPQAGS
Trigger: GGATCCAGCCTGTGGCTGCCATTGACTCCAATTTTG...TCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAAACTTGTGGGACACCTTaGTCCAGTGCTCACGGTTGG +
Preference number: 4 (lower is better)
Translates to: RQLHRVLEKRISLKATQKTCGTP*SSAHGW
Trigger: CCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGT...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR CAA 72 bp TACAAAGCGGTCAGCCCACGGGACCATATACGACAGTaGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: YKAVSPRDHIRQ*HRVLEKRISLK
Trigger: CTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GTTTCCAAGATGCCACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGAACGAGGGGTATAGGTaGAACTTGCAAAATTGGAGT +
Preference number: 4 (lower is better)
Translates to: VSKMPHSAHSDVSPSPSMNEGYR*NLQNWS
Trigger: ACTCCAATTTTGCAAGTTTCACCTATACCCCTCGTT...CATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGTGGCATCTTGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR TCA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTCCTCGAGGTAGTTGGTaGGCTCCAGGTTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: TPVLSENKLQSLREVGSLPRGSW*APGSCR
Trigger: TCTACAAGAACCTGGAGCTCACCAACTACCTCGAGG...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GGGACTCCGCAGAGCGATAGAGCTATTTTAGACATTGATCTAAAATGGATCTTAGATGCCCGGGTCTCCTaGTGCAGGTATTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: GTPQSDRAILDIDLKWILDARVS*CRYWST
Trigger: AGTGCTCCAATACCTGCAGCAGGAGACCCGGGCATC...TAAGATCCATTTTAGATCAATGTCTAAAATAGCTCTATCGCTCTGCGGAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGATGCCCGGGTCTCCTaGTGCAGGTATTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: LDIDLKWILEHGLSYPLPDARVS*CRYWST
Trigger: AGTGCTCCAATACCTGCAGCAGGAGACCCGGGCATC...AGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTCACAGAGCAGATCTCTaGGTTGCTGAGGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TPVLSENKLQSLREVGSLHRADL*VAEVSG
Trigger: GCCAGAAACCTCAGCAACGCAGAGATCTGCTCTGTG...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTCATTGGCCAGGTGGCTaGGATACTGAGCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: TPVLSENKLQSLREVGSLHWPGG*DTEPHS
Trigger: TGAATGAGGCTCAGTATCGCAGCCACCTGGCCAATG...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTATAGGTGAAACTTaGAAAATTGGAGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPGIGET*KIGVNG
Trigger: GCCATTGACTCCAATTTTGCAAGTTTCACCTATACC...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp GGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTTGGGAAAGACTTATGAAATTCATGTCCTaGAGCATGCTCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: GQGETIKLLRQRMAWERLMKFMS*SMLRMA
Trigger: GGCCATCCTGAGCATGCTGCAGGACATGAATTTCAT...AAGTCTTTCCCAAGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp GGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTTGGGAAAGACTTGGAAAGAGTTGTTTGTaGCTCTGTGGTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GQGETIKLLRQRMAWERLGKSCL*LCGPGH
Trigger: ATGACCTGGACCACAGAGGCACAAACAACTCTTTCC...AAGTCTTTCCCAAGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR GCA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGGGGTTGGGCTCTCTGTaGCTTAGGGTTGCAGAAACA +
Preference number: 4 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQGLGSL*LRVAET
Trigger: TGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCC...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAATCCTGCTGCAGGTATTaGAGCACTTTGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RQLHRVLEKRISLKATQKSCCRY*STLSCR
Trigger: CCTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGA...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAAAGTTTCTGTTCCTTCTaGAAGGCCAGGGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RQLHRVLEKRISLKATQKSFCSF*KARVLV
Trigger: CACCAGCACCCTGGCCTTCCAGAAGGAACAGAAACT...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGTTTCTGTTCCTTCTaGAAGGCCAGGGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDSFCSF*KARVLV
Trigger: CACCAGCACCCTGGCCTTCCAGAAGGAACAGAAACT...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGGAGACGTCATCCAGGTaGGTGAAGAGGTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQETSSR*VKRFFA
Trigger: GGCAAAGAACCTCTTCACCCACCTGGATGACGTCTC...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTGCTACACCGATGACCTCCTaGTTCTCGTTCTTGATGGGG +
Preference number: 4 (lower is better)
Translates to: PVLSENKLQSLREVGSLATPMTS*FSFLMG
Trigger: CCCCATCAAGAACGAGAACCAGGAGGTCATCGGTGT...AGCAAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TCATCGGAGACCTTCATGTGGTACATCATCATCTCATTGGCCAGGTGGCTGCGATCGGAGACCTTCATGTaGTACATCATCATCTCATTG +
Preference number: 4 (lower is better)
Translates to: SSETFMWYIIISLARWLRSETFM*YIIISL
Trigger: CAATGAGATGATGATGTACCACATGAAGGTCTCCGA...TCGCAGCCACCTGGCCAATGAGATGATGATGTACCACATGAAGGTCTCCGATGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CCA 90 bp GGGACTCCGCAGAGCGATAGAGCTATTTTAGACATTGATCTAAAATGGATCTTATACCCGCTCCCTGTTTaGCCCAGACAGGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: GTPQSDRAILDIDLKWILYPLPV*PRQGKR
Trigger: TCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTA...TAAGATCCATTTTAGATCAATGTCTAAAATAGCTCTATCGCTCTGCGGAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GAAAGAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATAGGCCTGAAATGTCGATaGCAGAGCCCAGACTCAGCA +
Preference number: 4 (lower is better)
Translates to: ERNRFILMYKAVSPRDHIGLKCR*QSPDSA
Trigger: TGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCC...TATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACTCCTTCCGGGAGAAATaGTCAAAGATGTTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDSFREK*SKMLQP
Trigger: CGGCTGCAACATCTTTGATCATTTCTCCCGGAAGGA...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTGCTCACAGCCCAACATaGTCTGCAGCTGTTGTACAT +
Preference number: 4 (lower is better)
Translates to: TPVLSENKLQSLREVGSLAHSPT*SAAVVH
Trigger: ATGTACAACAGCTGCAGAGCATGTTGGGCTGTGAGC...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR GCA 90 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTCCTGATCGGCCGGGATaGGGATCTCATAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LDIDLKWILEHGLSYPLPPDRPG*GSHSSH
Trigger: ATGAGAGCTATGAGATCCGCATCCCGGCCGATCAGG...AGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp TCATCGGAGACCTTCATGTGGTACATCATCATCTCATTGGCCAGGTGGCTGCGAGGTATAGGTGAAACTTaGAAAATTGGAGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: SSETFMWYIIISLARWLRGIGET*KIGVNG
Trigger: GCCATTGACTCCAATTTTGCAAGTTTCACCTATACC...TCGCAGCCACCTGGCCAATGAGATGATGATGTACCACATGAAGGTCTCCGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR GCA 90 bp GGGACTCCGCAGAGCGATAGAGCTATTTTAGACATTGATCTAAAATGGATCTTAGCATCAGATCCAGCATaGGCTGATAGTCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GTPQSDRAILDIDLKWILASDPA*ADSPSG
Trigger: CCCGGAAGGACTATCAGCGCATGCTGGATCTGATGC...TAAGATCCATTTTAGATCAATGTCTAAAATAGCTCTATCGCTCTGCGGAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp CCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTGCTGGTCCTTCAGCTGGATaGACTTCTTGTCTTCCACCA +
Preference number: 4 (lower is better)
Translates to: PVLSENKLQSLREVGSLAGPSAG*TSCLPP
Trigger: TGGTGGAAGACAAGAAGTCCATCCAGCTGAAGGACC...AGCAAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTCAGAGGAGAAGTCTGTaGTGCTGCTTGTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: TPVLSENKLQSLREVGSLQRRSL*CCLLFR
Trigger: CCGAAACAACAAGCAGCACCACAGACTTCTCCTCTG...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTACTTGTGGGACACCTTaGTCCAGTGCTCACGGTTGG +
Preference number: 4 (lower is better)
Translates to: LDIDLKWILEHGLSYPLPTCGTP*SSAHGW
Trigger: CCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGT...AGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GAAAGAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACAGCGAGTTGTTACTTaGGAGGCCGCGGATGGTGAA +
Preference number: 4 (lower is better)
Translates to: ERNRFILMYKAVSPRDHIQRVVT*EAADGE
Trigger: TTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTG...TATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
3UTR CAA 72 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATaGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGG +
Preference number: 4 (lower is better)
Translates to: LDIDLKWILEHG*SYPLPVWPRQG
Trigger: CCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR TCA 90 bp GGGACTCCGCAGAGCGATAGAGCTATTTTAGACATTGATCTAAAATGGATCTTACGTCATCCAGGTGGGTaGAGAGGTTCTTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: GTPQSDRAILDIDLKWILRHPGG*RGSLPL
Trigger: AAGTGGCAAAGAACCTCTTCACCCACCTGGATGACG...TAAGATCCATTTTAGATCAATGTCTAAAATAGCTCTATCGCTCTGCGGAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTCAGCCCAACATGCTCTaGAGCTGTTGTACATCCTCG +
Preference number: 4 (lower is better)
Translates to: LDIDLKWILEHGLSYPLPQPNML*SCCTSS
Trigger: CGAGGATGTACAACAGCTGCAGAGCATGTTGGGCTG...AGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTACACCGATGACCTCCTaGTTCTCGTTCTTGATGGGG +
Preference number: 4 (lower is better)
Translates to: LDIDLKWILEHGLSYPLPTPMTS*FSFLMG
Trigger: CCCCATCAAGAACGAGAACCAGGAGGTCATCGGTGT...AGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GAAAGAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATAAAGATGTTGCAGCCGTaGGTGTTGAGGATGGCGATG +
Preference number: 4 (lower is better)
Translates to: ERNRFILMYKAVSPRDHIKMLQP*VLRMAM
Trigger: CATCGCCATCCTCAACACCCACGGCTGCAACATCTT...TATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTGCTGCAACAGCTTGTAGATaGGCATTGCAATGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PVLSENKLQSLREVGSLAATACR*ALQCAP
Trigger: TGGAGCACATTGCAATGCCCATCTACAAGCTGTTGC...AGCAAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CCA 90 bp GAAAGAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATAAGGCAGGAGGAAGCATaGCTGGCTCATTCATACCTG +
Preference number: 4 (lower is better)
Translates to: ERNRFILMYKAVSPRDHIRQEEA*LAHSYL
Trigger: CAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCT...TATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTCAAGATGCCACACTCTaGTCACTCAGATGTCTCACC +
Preference number: 4 (lower is better)
Translates to: LDIDLKWILEHGLSYPLPQDATL*SLRCLT
Trigger: GGTGAGACATCTGAGTGAGCAGAGTGTGGCATCTTG...AGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACGAACTTGCTGAACCATaGCCCATTGATCTTGTTCAC +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDELAEP*PIDLVH
Trigger: GTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTC...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GAAAGAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATAACATCATCATCTCATTaGCCAGGTGGCTGCGATACT +
Preference number: 4 (lower is better)
Translates to: ERNRFILMYKAVSPRDHITSSSH*PGGCDT
Trigger: AGTATCGCAGCCACCTGGCCAATGAGATGATGATGT...TATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GGGACTCCGCAGAGCGATAGAGCTATTTTAGACATTGATCTAAAATGGATCTTAATGGATCTTAGAGCATaGATTGTCTTACCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: GTPQSDRAILDIDLKWILMDLRA*IVLPAP
Trigger: GGGAGCGGGTAAGACAATCCATGCTCTAAGATCCAT...TAAGATCCATTTTAGATCAATGTCTAAAATAGCTCTATCGCTCTGCGGAGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR GCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACGGTATAGGTGAAACTTaGAAAATTGGAGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDGIGET*KIGVNG
Trigger: GCCATTGACTCCAATTTTGCAAGTTTCACCTATACC...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACCATCATGGAGAAGTTTaGTATACTCATCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDHHGEV*YTHHRR
Trigger: TCTCCGATGATGAGTATACCAAACTTCTCCATGATG...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGCATCATGGAGAAGTTTaGTATACTCATCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQHHGEV*YTHHRR
Trigger: TCTCCGATGATGAGTATACCAAACTTCTCCATGATG...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp CCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAGACATTGATCTAAAATaGATCTTAGAGCATGGATTG +
Preference number: 4 (lower is better)
Translates to: PRDHIRQLHRVLEKRISLDIDLK*ILEHGL
Trigger: CAATCCATGCTCTAAGATCCATTTTAGATCAATGTC...TAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
3UTR CAA 72 bp TGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTaGGAAGTCTTGCTTCCATTATACAGACGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: CSQKTNYKVSVR*EVLLPLYRRES
Trigger: GCTTTCTCGTCTGTATAATGGAAGCAAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR TCA 90 bp GAAAGAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATAAACGAGGGGTATAGGTaGAACTTGCAAAATTGGAGT +
Preference number: 4 (lower is better)
Translates to: ERNRFILMYKAVSPRDHINEGYR*NLQNWS
Trigger: ACTCCAATTTTGCAAGTTTCACCTATACCCCTCGTT...TATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTCATCATGGAGAAGTTTaGTATACTCATCATCGGAGA +
Preference number: 4 (lower is better)
Translates to: LDIDLKWILEHGLSYPLPHHGEV*YTHHRR
Trigger: TCTCCGATGATGAGTATACCAAACTTCTCCATGATG...AGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CCA 90 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGACATTGATCTAAAATaGATCTTAGAGCATGGATTG +
Preference number: 4 (lower is better)
Translates to: LDIDLKWILEHGLSYPLPDIDLK*ILEHGL
Trigger: CAATCCATGCTCTAAGATCCATTTTAGATCAATGTC...AGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS TCA 90 bp GGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCCGCGGCTCAGCCGGTCGCGCTGCCG +
Preference number: 5 (lower is better)
Translates to: GCRRMAAAAAAARPA*GRPAGPAAQPVALP
Trigger: CGGCAGCGCGACCGGCTGAGCCGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000542969.2
CDS TCA 90 bp GGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCCGCAGACACCGAGCGCACACACGGC +
Preference number: 5 (lower is better)
Translates to: GCRRMAAAAAAARPA*GRPAGPADTERTHG
Trigger: GCCGTGTGTGCGCTCGGTGTCTGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485058.7
CDS TCA 90 bp GGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCCGCTGTGTGTCCAGCTTGGTCCAAC +
Preference number: 5 (lower is better)
Translates to: GCRRMAAAAAAARPA*GRPAGPAVCPAWSN
Trigger: GTTGGACCAAGCTGGACACACAGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536458.1
CDS GCA 90 bp AAGACCTGCTGGCCCCGCGGCTCAGCCGGTCGCGCTGCCGGGTACTaGTGGCTCCTGCAGAGGATGGAGTGGCCGCATGCCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: KTCWPRGSAGRAAGY*WLLQRMEWPHACPI
Trigger: GATGGGGCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCGCGGGGCCAGCAGGTCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000542969.2
CDS CCA 90 bp ACCTGCTGGCCCCGCGGCTCAGCCGGTCGCGCTGCCGGGTACTGCTaGCTCCTGCAGAGGATGGAGTGGCCGCATGCCTGCCCCATCACT +
Preference number: 5 (lower is better)
Translates to: TCWPRGSAGRAAGYC*LLQRMEWPHACPIT
Trigger: AGTGATGGGGCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCGCGGGGCCAGCAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000542969.2
CDS GCA 90 bp TGCTGGCCCCGCCTGAGGAATTGGACAACAGCGATGAGGATGTGGTaGAGCACCAGGACCATGCTCGCAGCCGCCCGCCCGCCCGCCGGC +
Preference number: 5 (lower is better)
Translates to: CWPRLRNWTTAMRMW*STRTMLAAARPPAG
Trigger: GCCGGCGGGCGGGCGGGCGGCTGCGAGCATGGTCCTGGTGCTGCACCACATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000536308.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
ENST00000544570.5
CDS CCA 90 bp GCCGGTCGCGCTGCCGGGTACTGCTGGCTCCTGCAGAGGATGGAGTaGCCGCATGCCTGCCCCATCACTCCTCATCGTCCGCCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: AGRAAGYCWLLQRME*PHACPITPHRPPPQ
Trigger: CTGGGGAGGCGGACGATGAGGAGTGATGGGGCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000535701.1
ENST00000540380.5
ENST00000542969.2
ENST00000546038.1
CDS-3UTR CAA 90 bp CAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: QDLHPPQGDQGMLLHRLQGGSSG*RKTCWP
Trigger: GGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCC...CTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS GCA 90 bp AGGCCTGAAATGTCGATGACAGAGCCCAGACTCAGCAAGGCGTCCTaGAGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: RPEMSMTEPRLSKAS*RLSAHGCGGGGGSS
Trigger: GGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCTGCAGGACGCCTTGCTGAGTCTGGGCTCTGTCATCGACATTTCAGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000536308.5
ENST00000540345.5
ENST00000544570.5
CDS GCA 90 bp ACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTaGACCTGCAGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: TACRLHSSLSLSWPQ*TCRLSAHGCGGGGG
Trigger: GCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCTGCAGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418754.6
CDS GCA 90 bp AATCCAGCTCTGCTGCCCCGCTGCTCCCGCCTCTCCCGCTGCCACTaGCTCTGCTGCTCGGCTGGCTCTGGGAGGAGGTTGGAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: NPALLPRCSRLSRCH*LCCSAGSGRRLEQV
Trigger: GACCTGCTCCAACCTCCTCCCAGAGCCAGCCGAGCAGCAGAGGCAGTGGCAGCGGGAGAGGCGGGAGCAGCGGGGCAGCAGAGCTGGATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540380.5
ENST00000546038.1
CDS GCA 90 bp CAGACTCAGCAAGGCGTCGGCTCAGCCGGTCGCGCTGCCGGGTACTaGTGGCTCCTGCAGAGGATGGAGTGGCCGCATGCCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: QTQQGVGSAGRAAGY*WLLQRMEWPHACPI
Trigger: GATGGGGCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCGACGCCTTGCTGAGTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540380.5
CDS CCA 90 bp GCTCAGCCGGTCGCGCTGCCGGGTACTGCTGGCTCCTGCAGAGGATaGAGTGGCCGCATGCCTGCCCCATCACTCCTCATCGTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: AQPVALPGTAGSCRG*SGRMPAPSLLIVRL
Trigger: GAGGCGGACGATGAGGAGTGATGGGGCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000535701.1
ENST00000540380.5
ENST00000542969.2
ENST00000546038.1
CDS CCA 90 bp ACCTGCTGGCCCCGCCTGAGGAATTGGACAACAGCGATGAGGATGTaGTGCAGCACCAGGACCATGCTCGCAGCCGCCCGCCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: TCWPRLRNWTTAMRM*CSTRTMLAAARPPA
Trigger: GGCGGGCGGGCGGGCGGCTGCGAGCATGGTCCTGGTGCTGCACCACATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000536308.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
ENST00000544570.5
CDS CCA 90 bp GGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTaGCCCCGCCTGAGGAATTGGACAACAGCGATGAGGATGTGGTGC +
Preference number: 5 (lower is better)
Translates to: GCGGGGGSSGLRKTC*PRLRNWTTAMRMWC
Trigger: GCACCACATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000536308.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGCTGGGGTCCTGGCTCCTTaGCAAGGGGGTCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: DLHPPQGDQGMLLHRLQAGVLAP*QGGPGW
Trigger: CCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCC...AGCCTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543575.5
CDS-3UTR CAA 90 bp CTACTCCCTGGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGCTGGCTGCAGGCGGGGTCCTGGCTCCTTaGCAAGGGGGTCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LLPGGPGSFARGSRLAAGGVLAP*QGGPGW
Trigger: CCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCC...GCCTGCAGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS GCA 90 bp CATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTaGTGGCCCCGCCTGAGGAATTGGACAACAGCGATGAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: HGCGGGGGSSGLRKT*WPRLRNWTTAMRMW
Trigger: CCACATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000536308.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
ENST00000544570.5
CDS GCA 90 bp TGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCTaGAGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: CRLHSSLSLSWPQCT*RLSAHGCGGGGGSS
Trigger: GGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCTGCAGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418754.6
CDS CCA 90 bp ACTCAGCAAGGCGTCGGCTCAGCCGGTCGCGCTGCCGGGTACTGCTaGCTCCTGCAGAGGATGGAGTGGCCGCATGCCTGCCCCATCACT +
Preference number: 5 (lower is better)
Translates to: TQQGVGSAGRAAGYC*LLQRMEWPHACPIT
Trigger: AGTGATGGGGCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCGACGCCTTGCTGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540380.5
CDS-3UTR CAA 90 bp TTGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCACGGCCCCAGCCTCCTaGTCCGCTAGCGGCATGACC +
Preference number: 5 (lower is better)
Translates to: LEDLAVAVGVRRPALLVFTAPAS*SASGMT
Trigger: GGTCATGCCGCTAGCGGACAAGGAGGCTGGGGCCGT...GAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGACGGCCCCAGCCTCCTaGTCCGCTAGCGGCATGACC +
Preference number: 5 (lower is better)
Translates to: PVALFPVHLARPVEGCGRTAPAS*SASGMT
Trigger: GGTCATGCCGCTAGCGGACAAGGAGGCTGGGGCCGT...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGGGAAGCAGAGGATGTaGCGCGTGCGGAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: AAGPAPSAGRPGYASPPPGKQRM*RVRKPV
Trigger: CACCGGCTTCCGCACGCGCAACATCCTCTGCTTCCC...AGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS GCA 90 bp CGCTGCCGGGTACTGCTGGCTCCTGCAGAGGATGGAGTGGCCGCATaGCTGCCCCATCACTCCTCATCGTCCGCCTCCCCAGCCAGACTA +
Preference number: 5 (lower is better)
Translates to: RCRVLLAPAEDGVAA*LPHHSSSSASPARL
Trigger: TAGTCTGGCTGGGGAGGCGGACGATGAGGAGTGATGGGGCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000535701.1
ENST00000540380.5
ENST00000542969.2
ENST00000546038.1
CDS CCA 90 bp GCCCAGACTCAGCAAGGCGTCCTCCAGTCGGTCGTCTCTACTCCCTaGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGCTGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AQTQQGVLQSVVSTP*GSWLLCKGVQAGCR
Trigger: CCTGCAGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGACCGACTGGAGGACGCCTTGCTGAGTCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000444035.6
ENST00000485058.7
ENST00000538749.5
ENST00000539367.5
ENST00000541998.5
ENST00000542969.2
ENST00000543575.5
CDS CCA 90 bp GGGACCTGCCCTCGCAGTTTCCGCAGGTTACGTACGTCCCAGGCATaGAACCCGACTCCCTTATGCTCCGGGACGCTGGAGGCGGTGGGG +
Preference number: 5 (lower is better)
Translates to: GTCPRSFRRLRTSQA*NPTPLCSGTLEAVG
Trigger: CCCCACCGCCTCCAGCGTCCCGGAGCATAAGGGAGTCGGGTTCCATGCCTGGGACGTACGTAACCTGCGGAAACTGCGAGGGCAGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441209.6
CDS CCA 90 bp GCCCAGACTCAGCAAGGCGTCCTCCAGTCGGTCGTCTCTACTCCCTaGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGCTGGCCTGAGC +
Preference number: 5 (lower is better)
Translates to: AQTQQGVLQSVVSTP*GSWLLCKGVQAGLS
Trigger: GCTCAGGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGACCGACTGGAGGACGCCTTGCTGAGTCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS-3UTR CAA 90 bp CTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LLQDLHPPQGDQGMLLHRADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...GCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
CDS-3UTR CAA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTACGGCCCCAGCCTCCTaGTCCGCTAGCGGCATGACC +
Preference number: 5 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPTAPAS*SASGMT
Trigger: GGTCATGCCGCTAGCGGACAAGGAGGCTGGGGCCGT...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAACGGCCCCAGCCTCCTaGTCCGCTAGCGGCATGACC +
Preference number: 5 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGTAPAS*SASGMT
Trigger: GGTCATGCCGCTAGCGGACAAGGAGGCTGGGGCCGT...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp TGGAGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGAGTTCCCCGCACAGTaGGAGGATCTTGCGGTCGCG +
Preference number: 5 (lower is better)
Translates to: WRILRSRSVYAAPPFWSSEFPAQ*EDLAVA
Trigger: CGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTC...GGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR CAA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCGGGAAGCAGAGGATGTaGCGCGTGCGGAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAGKQRM*RVRKPV
Trigger: CACCGGCTTCCGCACGCGCAACATCCTCTGCTTCCC...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGGTCCAGTGCTCACGGTaGGAGGCCACGCGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: PVALFPVHLARPVEGCGRVQCSR*EATRSY
Trigger: GTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGAC...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS GCA 90 bp CACTTTGAGCTGCAGGGAAGAGGCATCCAGGTCGTAGAGTTCCCCTaGAAGGGCCAGGCGCCGGTCAGAGAGAGGGCCCCTCCGCACCTC +
Preference number: 5 (lower is better)
Translates to: HFELQGRGIQVVEFP*KGQAPVRERAPPHL
Trigger: GAGGTGCGGAGGGGCCCTCTCTCTGACCGGCGCCTGGCCCTTGCAGGGGAACTCTACGACCTGGATGCCTCTTCCCTGCAGCTCAAAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475807.6
CDS GCA 90 bp AAGCTGGAGATTGTCCTCCGACACCAGCAGGAGGCAGCAGCGGGATaGCCGGGTCTCCTGCTGCAGCTGAGAGAGGGACAGGCAGGGCGA +
Preference number: 5 (lower is better)
Translates to: KLEIVLRHQQEAAAG*PGLLLQLREGQAGR
Trigger: TCGCCCTGCCTGTCCCTCTCTCAGCTGCAGCAGGAGACCCGGGCATCCCGCTGCTGCCTCCTGCTGGTGTCGGAGGACAATCTCCAGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538299.1
CDS CCA 90 bp CAGCAAGGCGTCCTCCAGTCGGTCGTCTCTACTCCCTGGGGGTCCTaGCTCCTTTGCAAGGGGGTCCAGGCTGGCCTGAGCTCCCGAAAC +
Preference number: 5 (lower is better)
Translates to: QQGVLQSVVSTPWGS*LLCKGVQAGLSSRN
Trigger: GTTTCGGGAGCTCAGGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGACCGACTGGAGGACGCCTTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS-3UTR CAA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: EKKREASGRADPRVPALWGGSSG*RKTCWP
Trigger: GGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCC...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp TGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCCGGCATGACCAGCACTaGGGTATCAGGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: CRTCTLRRATRVCFSTACRHDQH*GIRSQW
Trigger: CCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCG...GCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR CAA 90 bp CTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCGGCATGACCAGCACTaGGGTATCAGGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: LLQDLHPPQGDQGMLLHRRHDQH*GIRSQW
Trigger: CCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCG...GCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR CAA 90 bp GCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTCACAGTTGGAGGATCTaGCGGTCGCGGTCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: AAGPAPSAGRPGYASPPPHSWRI*RSRSVY
Trigger: GTACACCGACCGCGACCGCAAGATCCTCCAACTGTG...AGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR CAA 90 bp CCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGGAGTTCCCCGCACAGTaGGAGGATCTTGCGGTCGCG +
Preference number: 5 (lower is better)
Translates to: PRTRGSVPSASGQTSGGLEFPAQ*EDLAVA
Trigger: CGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTC...CAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGGAAGCAGAGGATGTaGCGCGTGCGGAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVGKQRM*RVRKPV
Trigger: CACCGGCTTCCGCACGCGCAACATCCTCTGCTTCCC...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGGTCCAGTGCTCACGGTaGGAGGCCACGCGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: VALFPVHLARPVEGCGRWVQCSR*EATRSY
Trigger: GTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGAC...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGTCCAGTGCTCACGGTaGGAGGCCACGCGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVVQCSR*EATRSY
Trigger: GTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGAC...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS GCA 90 bp TCAGGAAGCTGTAAACTTGGCTCAGCCGGTCGCGCTGCCGGGTACTaGTGGCTCCTGCAGAGGATGGAGTGGCCGCATGCCTGCCCCATC +
Preference number: 5 (lower is better)
Translates to: SGSCKLGSAGRAAGY*WLLQRMEWPHACPI
Trigger: GATGGGGCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCAAGTTTACAGCTTCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS CCA 90 bp GGAAGCTGTAAACTTGGCTCAGCCGGTCGCGCTGCCGGGTACTGCTaGCTCCTGCAGAGGATGGAGTGGCCGCATGCCTGCCCCATCACT +
Preference number: 5 (lower is better)
Translates to: GSCKLGSAGRAAGYC*LLQRMEWPHACPIT
Trigger: AGTGATGGGGCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCAAGTTTACAGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS-3UTR CAA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: TRGSVPSASGQTSGGLWEADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp TCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: STRGSTADRASLTARCRPADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CAA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCGGCATGACCAGCACTaGGGTATCAGGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: GSVPSASGQTSGGLWEVARHDQH*GIRSQW
Trigger: CCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCACAGTTGGAGGATCTaGCGGTCGCGGTCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: PVALFPVHLARPVEGCGRHSWRI*RSRSVY
Trigger: GTACACCGACCGCGACCGCAAGATCCTCCAACTGTG...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGAGTTCCCCGCACAGTaGGAGGATCTTGCGGTCGCG +
Preference number: 5 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRAEFPAQ*EDLAVA
Trigger: CGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTC...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGAGTTCCCCGCACAGTaGGAGGATCTTGCGGTCGCG +
Preference number: 5 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGEFPAQ*EDLAVA
Trigger: CGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTC...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGAGTTCCCCGCACAGTaGGAGGATCTTGCGGTCGCG +
Preference number: 5 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPEFPAQ*EDLAVA
Trigger: CGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTC...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GCGCTGCTGCAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACAGCTGGATGGACTTCTaGTCTTCCACCACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: ALLQDLHPPQGDQGMLLHSWMDF*SSTTWP
Trigger: GGGCCAGGTGGTGGAAGACAAGAAGTCCATCCAGCT...GTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTGCAGCAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp AGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCCCCGCGGATGGTGAACTaGTGGGACACCTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: REKPVAGLTQESRPYGVSPRMVN*WDTLVQ
Trigger: CTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGG...GGAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCCGCGGATGGTGAACTaGTGGGACACCTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAPRMVN*WDTLVQ
Trigger: CTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCAGGAAGTCCAGCGAGTaGTTACTTGGGAGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: GSVPSASGQTSGGLWEVARKSSE*LLGRPR
Trigger: CCGCGGCCTCCCAAGTAACAACTCGCTGGACTTCCT...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGAGGCTGCAGCAGCCATaGATGGGGGCCCTAGTGCCA +
Preference number: 5 (lower is better)
Translates to: VALFPVHLARPVEGCGRWRLQQP*MGALVP
Trigger: TGGCACTAGGGCCCCCATCAATGGCTGCTGCAGCCT...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCAGGCTGCAGCAGCCATaGATGGGGGCCCTAGTGCCA +
Preference number: 5 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGRLQQP*MGALVP
Trigger: TGGCACTAGGGCCCCCATCAATGGCTGCTGCAGCCT...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGGCTGCCCCGCCTGAGGAATaGGACAACAGCGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: DLHPPQGDQGMLLHRLQAAPPEE*DNSDED
Trigger: ATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGC...AGCCTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536308.5
ENST00000539367.5
ENST00000543575.5
ENST00000543750.5
CDS-3UTR CAA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATGGGGTCCTGGCTCCTTaGCAAGGGGGTCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHGVLAP*QGGPGW
Trigger: CCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCC...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp TCATTGCACATGGCCCCACTCCCACTCACATGCTTCTCCACCGCCTGCAGGCTCGGGGTCCTGGCTCCTTaGCAAGGGGGTCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SLHMAPLPLTCFSTACRLGVLAP*QGGPGW
Trigger: CCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCC...GAGCCTGCAGGCGGTGGAGAAGCATGTGAGTGGGAGTGGGGCCATGTGCAATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541998.5
CDS GCA 90 bp CTTGGGAGGCCGCGGATGGTGAACTTGTGGGACACCTTGGTCCAGTaGTCACGGTTGGAGGCCACGCGCTCGTACAGCTCTGCCGCTTTG +
Preference number: 5 (lower is better)
Translates to: LGRPRMVNLWDTLVQ*SRLEATRSYSSAAL
Trigger: CAAAGCGGCAGAGCTGTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CCA 90 bp CCTGAGGTCACATGCCCTGGGCATGGTTGGTCCAAGAGCAGCCCTTaGGATCATCCAGTCCAGCCTCTAGCCCCTGGGCAGGCCCTATGG +
Preference number: 5 (lower is better)
Translates to: PEVTCPGHGWSKSSP*DHPVQPLAPGQALW
Trigger: CCATAGGGCCTGCCCAGGGGCTAGAGGCTGGACTGGATGATCCCAAGGGCTGCTCTTGGACCAACCATGCCCAGGGCATGTGACCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420501.5
CDS-3UTR CAA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTGGSSG*RKTCWP
Trigger: GGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCC...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCAACGGCCCCAGCCTCCTaGTCCGCTAGCGGCATGACC +
Preference number: 5 (lower is better)
Translates to: PPPAGSIPHYHSAGHSAPTAPAS*SASGMT
Trigger: GGTCATGCCGCTAGCGGACAAGGAGGCTGGGGCCGT...TGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR CAA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGCACAGTTGGAGGATCTaGCGGTCGCGGTCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: TRGSVPSASGQTSGGLWEHSWRI*RSRSVY
Trigger: GTACACCGACCGCGACCGCAAGATCCTCCAACTGTG...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CAGGACCTGCACCCTCCGCAGGGCGACCAGGGTATGCTTCTCCACCGCCTGCAGCTCCTGCTGCAGGTATaGGAGCACTTTGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: QDLHPPQGDQGMLLHRLQLLLQV*EHFELQ
Trigger: CTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGAG...CTGCAGGCGGTGGAGAAGCATACCCTGGTCGCCCTGCGGAGGGTGCAGGTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp GTGTGGTCAGAGGTGCAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTGCTCGGGAAGCAGAGGATGTaGCGCGTGCGGAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: VWSEVQSRAHCSLVTPVLGKQRM*RVRKPV
Trigger: CACCGGCTTCCGCACGCGCAACATCCTCTGCTTCCC...GAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAATCTCCATCGGCCTGTaGCCCATGGCCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGISIGL*PMAFSR
Trigger: CCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGAT...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTATCTCCATCGGCCTGTaGCCCATGGCCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPISIGL*PMAFSR
Trigger: CCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGAT...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTACAGCTCTGCCGCTTaGGGGAACAGGTCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAYSSAA*GNRSCN
Trigger: GTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGTA...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTACAGCTCTGCCGCTTaGGGGAACAGGTCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: PVALFPVHLARPVEGCGRYSSAA*GNRSCN
Trigger: GTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGTA...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGTCCAGTGCTCACGGTaGGAGGCCACGCGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: EKKREASGRADPRVPALWVQCSR*EATRSY
Trigger: GTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGAC...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGACCGCGGATGGTGAACTaGTGGGACACCTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGPRMVN*WDTLVQ
Trigger: CTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGG...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGAGGAAGTCCAGCGAGTaGTTACTTGGGAGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: TRGSVPSASGQTSGGLWERKSSE*LLGRPR
Trigger: CCGCGGCCTCCCAAGTAACAACTCGCTGGACTTCCT...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGTCCAGCGAGTaGTTACTTGGGAGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRRKSSE*LLGRPR
Trigger: CCGCGGCCTCCCAAGTAACAACTCGCTGGACTTCCT...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp GAGGAAGACCTGCTGGCCCCGCCTGTGGGCAAGCGATTTCCCCTCCTGGATCCTCAGGAAGCTGTAAACTaGGCTCAGCCGGTCGCGCTG +
Preference number: 5 (lower is better)
Translates to: EEDLLAPPVGKRFPLLDPQEAVN*AQPVAL
Trigger: CAGCGCGACCGGCTGAGCCAAGTTTACAGCTTCCTG...AGGATCCAGGAGGGGAAATCGCTTGCCCACAGGCGGGGCCAGCAGGTCTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS TCA 90 bp GTCATGCCCTCCTACTGGACACCCCCACCCATTTGCCCATCCCAGTaGGCCTCCACTCCTTGGCTCCTTATCCCACCTCCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VMPSYWTPPPICPSQ*ASTPWLLIPPPASS
Trigger: GGAGCTGGCTGGAGGTGGGATAAGGAGCCAAGGAGTGGAGGCTCACTGGGATGGGCAAATGGGTGGGGGTGTCCAGTAGGAGGGCATGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536918.1
CDS GCA 90 bp GATCCAGCATGCGCTGATAGTCCTGAGGCGAGGGCAGGGGTGTCATaGCCTCCTACTGGACACCCCCACCCATTTGCCCATCCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: DPACADSPEARAGVS*PPTGHPHPFAHPSE
Trigger: CTCACTGGGATGGGCAAATGGGTGGGGGTGTCCAGTAGGAGGGCATGACACCCCTGCCCTCGCCTCAGGACTATCAGCGCATGCTGGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536918.1
CDS CCA 90 bp TGGCCCATTGATCTTGTTCACCAGCTCGGCCACACCGATGACCTCTaGGGAAGGGAGAGGGGCAAGGAACCACCGGTGGAGGGAGGGATC +
Preference number: 5 (lower is better)
Translates to: WPIDLVHQLGHTDDL*GRERGKEPPVEGGI
Trigger: GATCCCTCCCTCCACCGGTGGTTCCTTGCCCCTCTCCCTTCCCCAGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441209.6
CDS CCA 90 bp GAGGCAACCGTGGATGGGAGGCATGCAAGGCCAACTCCCTTAGGGTaGGAGACAGGAAAGGCAGAATGCCTGCCCCCTGAAGCCACCAGC +
Preference number: 5 (lower is better)
Translates to: EATVDGRHARPTPLG*ETGKAECLPPEATS
Trigger: GCTGGTGGCTTCAGGGGGCAGGCATTCTGCCTTTCCTGTCTCCCACCCTAAGGGAGTTGGCCTTGCATGCCTCCCATCCACGGTTGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS-3UTR CAA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGCACAGTTGGAGGATCTaGCGGTCGCGGTCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQHSWRI*RSRSVY
Trigger: GTACACCGACCGCGACCGCAAGATCCTCCAACTGTG...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGAGTTCCCCGCACAGTaGGAGGATCTTGCGGTCGCG +
Preference number: 5 (lower is better)
Translates to: EKKREASGRADPRVPALWEFPAQ*EDLAVA
Trigger: CGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTC...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp ATCCAGGTCGTAGAGTTCCCCGCACAGTTGGAGGATCTTGCGGTCGCGGTCGGTGAGTTCCCCGCACAGTaGGAGGATCTTGCGGTCGCG +
Preference number: 5 (lower is better)
Translates to: IQVVEFPAQLEDLAVAVGEFPAQ*EDLAVA
Trigger: CGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTC...ACCGACCGCGACCGCAAGATCCTCCAACTGTGCGGGGAACTCTACGACCTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536308.5
ENST00000539367.5
CDS-3UTR CAA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGCTCCTGCTGCAGGTATaGGAGCACTTTGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PVALFPVHLARPVEGCGRLLLQV*EHFELQ
Trigger: CTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGAG...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGAGCTGGATGGACTTCTaGTCTTCCACCACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: VALFPVHLARPVEGCGRWSWMDF*SSTTWP
Trigger: GGGCCAGGTGGTGGAAGACAAGAAGTCCATCCAGCT...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGAGCTGGATGGACTTCTaGTCTTCCACCACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVSWMDF*SSTTWP
Trigger: GGGCCAGGTGGTGGAAGACAAGAAGTCCATCCAGCT...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTTCTCCTTCTAGCTTGTaGAAGGCGCAGGCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGSPSSL*KAQAKA
Trigger: GGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGA...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCATGGCCCATTGATCTaGTTCACCAGCTCGGCCACA +
Preference number: 5 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAHGPLI*FTSSAT
Trigger: TGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCAGGTCCTCGTCGAACTaGCTGAACCATGGCCCATTG +
Preference number: 5 (lower is better)
Translates to: GSVPSASGQTSGGLWEVARSSSN*LNHGPL
Trigger: CAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCT...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGGCCACCTGGAAAGAGTaGTTTGTGCCTCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PVALFPVHLARPVEGCGRATWKE*FVPLWS
Trigger: GGACCACAGAGGCACAAACAACTCTTTCCAGGTGGC...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGGTAGTCTTCCAGCCCTaGGTCTGGTCAGAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: PVALFPVHLARPVEGCGRVVFQP*VWSERS
Trigger: TGACCTCTCTGACCAGACCAAGGGCTGGAAGACTAC...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTTACAGCTCTGCCGCTTaGGGGAACAGGTCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRAYSSAA*GNRSCN
Trigger: GTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGTA...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCAACTTGTGGGACACCTaGGTCCAGTGCTCACGGTTG +
Preference number: 5 (lower is better)
Translates to: GSVPSASGQTSGGLWEVANLWDT*VQCSRL
Trigger: CAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTT...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTCCGCGGATGGTGAACTaGTGGGACACCTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSPRMVN*WDTLVQ
Trigger: CTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGG...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGAGGCTGCAGCAGCCATaGATGGGGGCCCTAGTGCCA +
Preference number: 5 (lower is better)
Translates to: PASHRQEEAWLAHSYLGLRLQQP*MGALVP
Trigger: TGGCACTAGGGCCCCCATCAATGGCTGCTGCAGCCT...CAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGCTGAGACACTCAGGGTaGGGCTCTCTGTGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRLRHSG*GSLCLR
Trigger: CCTAAGGCACAGAGAGCCCAACCCTGAGTGTCTCAG...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGGGGGTCCTGGCTCCTTaGCAAGGGGGTCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GTHHPVGRCRQFPLGGAQGVLAP*QGGPGW
Trigger: CCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCC...CTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CAA 90 bp AGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGGGGGTCCTGGCTCCTTaGCAAGGGGGTCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: STADRASLTARCRPEMSMGVLAP*QGGPGW
Trigger: CCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCC...CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CAA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATGGGGTCCTGGCTCCTTaGCAAGGGGGTCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHGVLAP*QGGPGW
Trigger: CCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCC...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444035.6
ENST00000539367.5
CDS GCA 90 bp CTCCCAGTGGCAGCCCCCAGTAGAGGCAACCGTGGATGGGAGGCATaGAAGGCCAACTCCCTTAGGGTGGGAGACAGGAAAGGCAGAATG +
Preference number: 5 (lower is better)
Translates to: LPVAAPSRGNRGWEA*KANSLRVGDRKGRM
Trigger: CATTCTGCCTTTCCTGTCTCCCACCCTAAGGGAGTTGGCCTTGCATGCCTCCCATCCACGGTTGCCTCTACTGGGGGCTGCCACTGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS CCA 90 bp AAGTCCAGCGAGTTGTTACTTGGGAGGCCGCGGATGGTGAACTTGTaGGACACCTTGGTCCAGTGCTCACGGTTGGAGGCCACGCGCTCG +
Preference number: 5 (lower is better)
Translates to: KSSELLLGRPRMVNL*DTLVQCSRLEATRS
Trigger: CGAGCGCGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTGGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CCA 90 bp CCTTGGGATCATCCAGTCCAGCCTCTAGCCCCTGGGCAGGCCCTATaGCTTCCTGATGGCAGACTACAAGCCCCTCCATCTCTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: PWDHPVQPLAPGQAL*LPDGRLQAPPSLRD
Trigger: GTCCCTCAGAGATGGAGGGGCTTGTAGTCTGCCATCAGGAAGCCATAGGGCCTGCCCAGGGGCTAGAGGCTGGACTGGATGATCCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420501.5
CDS CCA 90 bp CCTTCCTGTCTCCCAGTGGCAGCCCCCAGTAGAGGCAACCGTGGATaGGAGGCATGCAAGGCCAACTCCCTTAGGGTGGGAGACAGGAAA +
Preference number: 5 (lower is better)
Translates to: PSCLPVAAPSRGNRG*EACKANSLRVGDRK
Trigger: TTTCCTGTCTCCCACCCTAAGGGAGTTGGCCTTGCATGCCTCCCATCCACGGTTGCCTCTACTGGGGGCTGCCACTGGGAGACAGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS-3UTR CAA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPGGSSG*RKTCWP
Trigger: GGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCC...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCAGGTCCCAATCCCACCATCAGTATAGTAGTGGTCCTCAGGGGGCCTTCGCCCCACAGTTGGAGGATCTaGCGGTCGCGGTCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: PGPNPTISIVVVLRGPSPHSWRI*RSRSVY
Trigger: GTACACCGACCGCGACCGCAAGATCCTCCAACTGTG...GGGCGAAGGCCCCCTGAGGACCACTACTATACTGATGGTGGGATTGGGACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR CAA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGAGGTATTGGAGCACTTaGAGCTGCAGGGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: PVALFPVHLARPVEGCGRRYWST*SCREEA
Trigger: TGCCTCTTCCCTGCAGCTCAAAGTGCTCCAATACCT...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp ACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTCTCCTGCTGCAGGTATaGGAGCACTTTGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TQDPWLCSQCIWPDQWRALLLQV*EHFELQ
Trigger: CTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGAG...AGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTCCTGCTGCAGGTATaGGAGCACTTTGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGLLLQV*EHFELQ
Trigger: CTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGAG...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGCAAGAAAGCTGGAGATaGTCCTCCGACACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRQESWR*SSDTSR
Trigger: CCTGCTGGTGTCGGAGGACAATCTCCAGCTTTCTTG...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTCAAGAAAGCTGGAGATaGTCCTCCGACACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGQESWR*SSDTSR
Trigger: CCTGCTGGTGTCGGAGGACAATCTCCAGCTTTCTTG...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp AGGATCTTGCGGTCGCGGTCGGTGTACGCCGCCCCGCCCTTCTGGTCTTCCGCCTTGTCTCCGATGACCTaGCAAGAAAGCTGGAGATTG +
Preference number: 5 (lower is better)
Translates to: RILRSRSVYAAPPFWSSALSPMT*QESWRL
Trigger: CAATCTCCAGCTTTCTTGCAAGGTCATCGGAGACAA...GGCGGAAGACCAGAAGGGCGGGGCGGCGTACACCGACCGCGACCGCAAGATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGCATGCTCTGCAGCTGTaGTACATCCTCGGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVHALQL*YILGGE
Trigger: CTCACCTCCGAGGATGTACAACAGCTGCAGAGCATG...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGACATGCTCTGCAGCTGTaGTACATCCTCGGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGHALQL*YILGGE
Trigger: CTCACCTCCGAGGATGTACAACAGCTGCAGAGCATG...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAAGTCTCCTTCTAGCTaGTTGAAGGCGCAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: PLPVWPRQGKRLAQRHTGKSPSS*LKAQAK
Trigger: CTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGACTT...GCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGAAGTCTCCTTCTAGCTaGTTGAAGGCGCAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: PVALFPVHLARPVEGCGRKSPSS*LKAQAK
Trigger: CTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGACTT...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGGCCTGGCACTCACACTaGAGTTTCTGTTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PVALFPVHLARPVEGCGRAWHSH*SFCSFW
Trigger: CCAGAAGGAACAGAAACTCAAGTGTGAGTGCCAGGC...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGAGGTTCTTTGCCACTaGGAGAAGAGCCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVEVLCH*EKSLAL
Trigger: GAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCTC...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGAGGTTCTTTGCCACTaGGAGAAGAGCCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVEVLCH*EKSLAL
Trigger: GAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCTC...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGAGGTTCTTTGCCACTaGGAGAAGAGCCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPEVLCH*EKSLAL
Trigger: GAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCTC...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTGGGAAGCAGAGGATGTaGCGCGTGCGGAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRGKQRM*RVRKPV
Trigger: CACCGGCTTCCGCACGCGCAACATCCTCTGCTTCCC...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCTCCTGGTTCTCGTTCTaGATGGGGAAGCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGSWFSF*MGKQRM
Trigger: CATCCTCTGCTTCCCCATCAAGAACGAGAACCAGGA...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGCATGGCCCATTGATCTaGTTCACCAGCTCGGCCACA +
Preference number: 5 (lower is better)
Translates to: TRGSVPSASGQTSGGLWEHGPLI*FTSSAT
Trigger: TGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATG...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGCTGAACCATGGCCCATaGATCTTGTTCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: PRTRGSVPSASGQTSGGLLNHGP*ILFTSS
Trigger: CGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAG...CAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCCTGAACCATGGCCCATaGATCTTGTTCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GSVPSASGQTSGGLWEVALNHGP*ILFTSS
Trigger: CGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAG...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGAGGTCCTCGTCGAACTaGCTGAACCATGGCCCATTG +
Preference number: 5 (lower is better)
Translates to: TRGSVPSASGQTSGGLWERSSSN*LNHGPL
Trigger: CAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCT...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGAGGTCCTCGTCGAACTaGCTGAACCATGGCCCATTG +
Preference number: 5 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVRSSSN*LNHGPL
Trigger: CAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCT...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCCCTGGAAAGAGTTGTTaGTGCCTCTGTGGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: PLPVWPRQGKRLAQRHTGPGKSC*CLCGPG
Trigger: ACCTGGACCACAGAGGCACAAACAACTCTTTCCAGG...GCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp CCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGCCTGGAAAGAGTTGTTaGTGCCTCTGTGGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: PRTRGSVPSASGQTSGGLPGKSC*CLCGPG
Trigger: ACCTGGACCACAGAGGCACAAACAACTCTTTCCAGG...CAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGCCACCTGGAAAGAGTaGTTTGTGCCTCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGATWKE*FVPLWS
Trigger: GGACCACAGAGGCACAAACAACTCTTTCCAGGTGGC...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTGTAGTCTTCCAGCCCTaGGTCTGGTCAGAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPVVFQP*VWSERS
Trigger: TGACCTCTCTGACCAGACCAAGGGCTGGAAGACTAC...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTAACTTGTGGGACACCTaGGTCCAGTGCTCACGGTTG +
Preference number: 5 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGNLWDT*VQCSRL
Trigger: CAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTT...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTAACTTGTGGGACACCTaGGTCCAGTGCTCACGGTTG +
Preference number: 5 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPNLWDT*VQCSRL
Trigger: CAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTT...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCATTGCAGCCCAGCCGCTTCTGGGAGATGATAGCCTCCCGGACTTTCCCCTCCGCCCCGCCTGAGGAATaGGACAACAGCGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: PLQPSRFWEMIASRTFPSAPPEE*DNSDED
Trigger: ATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGC...GGAGGGGAAAGTCCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp CGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGGCCCCGCCTGAGGAATaGGACAACAGCGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: RGSTADRASLTARCRPEMAPPEE*DNSDED
Trigger: ATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGC...CATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS GCA 90 bp CTTGGTCCAGTGCTCACGGTTGGAGGCCACGCGCTCGTACAGCTCTaGCGCTTTGGGGAACAGGTCCTGCAACAGCTTGTAGATGGGCAT +
Preference number: 5 (lower is better)
Translates to: LGPVLTVGGHALVQL*RFGEQVLQQLVDGH
Trigger: ATGCCCATCTACAAGCTGTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CCA 90 bp GTTGGGAGGGATGCAAACCCTGAGGTCACATGCCCTGGGCATGGTTaGTCCAAGAGCAGCCCTTGGGATCATCCAGTCCAGCCTCTAGCC +
Preference number: 5 (lower is better)
Translates to: VGRDANPEVTCPGHG*SKSSPWDHPVQPLA
Trigger: GGCTAGAGGCTGGACTGGATGATCCCAAGGGCTGCTCTTGGACCAACCATGCCCAGGGCATGTGACCTCAGGGTTTGCATCCCTCCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420501.5
CDS-3UTR CAA 90 bp GTTTCCAAGATGCCACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: VSKMPHSAHSDVSPSPSMGGSSG*RKTCWP
Trigger: GGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCC...CATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGTGGCATCTTGGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp AGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: STADRASLTARCRPEMSMADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CAA 90 bp AGCTCACAGCCCAACATGCTCTGCAGCTGTTGTACATCCTCGGAGGTGAGGTCCGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: SSQPNMLCSCCTSSEVRSADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...GGACCTCACCTCCGAGGATGTACAACAGCTGCAGAGCATGTTGGGCTGTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTTCTTCCCCGAGCACTTaGTCTCCGATGACCTTGCAA +
Preference number: 5 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGSSPST*SPMTLQ
Trigger: TTGCAAGGTCATCGGAGACAAAGTGCTCGGGGAAGA...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGAGCTGGATGGACTTCTaGTCTTCCACCACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: EKKREASGRADPRVPALWSWMDF*SSTTWP
Trigger: GGGCCAGGTGGTGGAAGACAAGAAGTCCATCCAGCT...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGCATGCTCTGCAGCTGTaGTACATCCTCGGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQHALQL*YILGGE
Trigger: CTCACCTCCGAGGATGTACAACAGCTGCAGAGCATG...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp AGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGAAGTCTCCTTCTAGCTaGTTGAAGGCGCAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: RTQDPWLCSQCIWPDQWRKSPSS*LKAQAK
Trigger: CTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGACTT...CCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTAAGTCTCCTTCTAGCTaGTTGAAGGCGCAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGKSPSS*LKAQAK
Trigger: CTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGACTT...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGCCTGGCACTCACACTaGAGTTTCTGTTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGAWHSH*SFCSFW
Trigger: CCAGAAGGAACAGAAACTCAAGTGTGAGTGCCAGGC...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp AAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTGGGAAGCAGAGGATGTaGCGCGTGCGGAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: KLRPRKVVLVQGHTGSPGGKQRM*RVRKPV
Trigger: CACCGGCTTCCGCACGCGCAACATCCTCTGCTTCCC...ACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGTCCTGGTTCTCGTTCTaGATGGGGAAGCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVSWFSF*MGKQRM
Trigger: CATCCTCTGCTTCCCCATCAAGAACGAGAACCAGGA...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp AAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCTCCTGGTTCTCGTTCTaGATGGGGAAGCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: KREASGRADPRVPALWGLSWFSF*MGKQRM
Trigger: CATCCTCTGCTTCCCCATCAAGAACGAGAACCAGGA...GAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGATCCTGGTTCTCGTTCTaGATGGGGAAGCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGSWFSF*MGKQRM
Trigger: CATCCTCTGCTTCCCCATCAAGAACGAGAACCAGGA...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp ACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGCTGAACCATGGCCCATaGATCTTGTTCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: TRGSVPSASGQTSGGLWELNHGP*ILFTSS
Trigger: CGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAG...CTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTAGGTCCTCGTCGAACTaGCTGAACCATGGCCCATTG +
Preference number: 5 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSRSSSN*LNHGPL
Trigger: CAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCT...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCTCCTGGAAAGAGTTGTTaGTGCCTCTGTGGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: ALFPVHLARPVEGCGRWPPGKSC*CLCGPG
Trigger: ACCTGGACCACAGAGGCACAAACAACTCTTTCCAGG...AGGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGGCCACCTGGAAAGAGTaGTTTGTGCCTCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQATWKE*FVPLWS
Trigger: GGACCACAGAGGCACAAACAACTCTTTCCAGGTGGC...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGATCTTCTGGAGGTCCTaGAAGATGCGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: RGSVPSASGQTSGGLWEVIFWRS*KMRRWW
Trigger: CCACCATCTCCGCATCTTCAAGGACCTCCAGAAGAT...CACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGATCTTCTGGAGGTCCTaGAAGATGCGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: VALFPVHLARPVEGCGRWIFWRS*KMRRWW
Trigger: CCACCATCTCCGCATCTTCAAGGACCTCCAGAAGAT...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CAGAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATATCTCCATCGGCCTGTaGCCCATGGCCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QRKREKPVAGLTQESRPYISIGL*PMAFSR
Trigger: CCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGAT...ATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp AAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTGTCCAGTGCTCACGGTaGGAGGCCACGCGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: KLRPRKVVLVQGHTGSPGVQCSR*EATRSY
Trigger: GTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGAC...ACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGCTGAGACACTCAGGGTaGGGCTCTCTGTGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: EKKREASGRADPRVPALWLRHSG*GSLCLR
Trigger: CCTAAGGCACAGAGAGCCCAACCCTGAGTGTCTCAG...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCAGGTGGATATGGCCTaGAAGAGAGAGCCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRQVDMA*KREPCQ
Trigger: CTGGCAGGGCTCTCTCTTCAAGGCCATATCCACCTG...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS TCA 90 bp CATCCAGGAAGTCCAGCGAGTTGTTACTTGGGAGGCCGCGGATGGTaGACTTGTGGGACACCTTGGTCCAGTGCTCACGGTTGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: HPGSPASCYLGGRGW*TCGTPWSSAHGWRP
Trigger: TGGCCTCCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTGGACTTCCTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CCA 90 bp CCCACCTCAGCCATCTTCTGGAGGTCCTTGAAGATGCGGAGATGGTaGGCCAGGTCTGTGGCCAAGATGATGTCCCGCATCAGATCCAGC +
Preference number: 5 (lower is better)
Translates to: PTSAIFWRSLKMRRW*ARSVAKMMSRIRSS
Trigger: GCTGGATCTGATGCGGGACATCATCTTGGCCACAGACCTGGCCCACCATCTCCGCATCTTCAAGGACCTCCAGAAGATGGCTGAGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000420501.5
ENST00000444035.6
ENST00000536918.1
ENST00000540345.5
ENST00000544239.1
ENST00000544570.5
CDS-3UTR CAA 90 bp ACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGACAGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: TADRASLTARCRPEMSMTADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...TGTCATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535701.1
ENST00000537631.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS-3UTR CAA 90 bp AGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGCGGCATGACCAGCACTaGGGTATCAGGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: STADRASLTARCRPEMSMRHDQH*GIRSQW
Trigger: CCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCG...CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537631.5
ENST00000539367.5
CDS-3UTR CAA 90 bp GTTTCCACTCGGGGGAGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGAGGTATTGGAGCACTTaGAGCTGCAGGGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: VSTRGSTADRASLTARCRRYWST*SCREEA
Trigger: TGCCTCTTCCCTGCAGCTCAAAGTGCTCCAATACCT...CCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCTCCCCCGAGTGGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTTGTCTCCGATGACCTaGCAAGAAAGCTGGAGATTG +
Preference number: 5 (lower is better)
Translates to: PVALFPVHLARPVEGCGRLSPMT*QESWRL
Trigger: CAATCTCCAGCTTTCTTGCAAGGTCATCGGAGACAA...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GCTAGCGGCATGACCAGCACTTGGGTATCAGGAGCCAGTGGAGCCACCAGCCTGTCCTGGTTCTCGTTCTaGATGGGGAAGCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: ASGMTSTWVSGASGATSLSWFSF*MGKQRM
Trigger: CATCCTCTGCTTCCCCATCAAGAACGAGAACCAGGA...CAGGCTGGTGGCTCCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCGCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp ATTGCAGCCCAGCCGCTTCTGGGAGATGATAGCCTCCCGGACTTTCCCCTCCTGCATGGCCCATTGATCTaGTTCACCAGCTCGGCCACA +
Preference number: 5 (lower is better)
Translates to: IAAQPLLGDDSLPDFPLLHGPLI*FTSSAT
Trigger: TGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATG...CAGGAGGGGAAAGTCCGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp TGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGCTGAACCATGGCCCATaGATCTTGTTCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: WSRTQDPWLCSQCIWPDQLNHGP*ILFTSS
Trigger: CGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAG...CTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTTACATCATCATCTCATaGGCCAGGTGGCTGCGATAC +
Preference number: 5 (lower is better)
Translates to: PWLCSQCIWPDQWRAVGGYIIIS*ARWLRY
Trigger: GTATCGCAGCCACCTGGCCAATGAGATGATGATGTA...ACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGTACATCATCATCTCATaGGCCAGGTGGCTGCGATAC +
Preference number: 5 (lower is better)
Translates to: VALFPVHLARPVEGCGRWYIIIS*ARWLRY
Trigger: GTATCGCAGCCACCTGGCCAATGAGATGATGATGTA...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTATCTTCTGGAGGTCCTaGAAGATGCGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: GLGPRTRGSVPSASGQTSIFWRS*KMRRWW
Trigger: CCACCATCTCCGCATCTTCAAGGACCTCCAGAAGAT...ACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGGTAGTCTTCCAGCCCTaGGTCTGGTCAGAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: PASHRQEEAWLAHSYLGLVVFQP*VWSERS
Trigger: TGACCTCTCTGACCAGACCAAGGGCTGGAAGACTAC...CAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGTCCAGTGCTCACGGTaGGAGGCCACGCGCTCGTAC +
Preference number: 5 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPVQCSR*EATRSY
Trigger: GTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGAC...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp TCAGGGGGCCTTCGCCCCGCGGCTGTTTCTAGTCCTCCCACAGAACTAAGGACTAACTTGTGGGACACCTaGGTCCAGTGCTCACGGTTG +
Preference number: 5 (lower is better)
Translates to: SGGLRPAAVSSPPTELRTNLWDT*VQCSRL
Trigger: CAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTT...AGTCCTTAGTTCTGTGGGAGGACTAGAAACAGCCGCGGGGCGAAGGCCCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGAGGAAGTCCAGCGAGTaGTTACTTGGGAGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRRKSSE*LLGRPR
Trigger: CCGCGGCCTCCCAAGTAACAACTCGCTGGACTTCCT...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCATCTTAGAGCATGGATaGTCTTACCCGCTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGILEHG*SYPLPV
Trigger: AACAGGGAGCGGGTAAGACAATCCATGCTCTAAGAT...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp CCACCGCCTGCAGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCACAGGTGGATATGGCCTaGAAGAGAGAGCCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: PPPAGSIPHYHSAGHSAPQVDMA*KREPCQ
Trigger: CTGGCAGGGCTCTCTCTTCAAGGCCATATCCACCTG...TGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCTGCAGGCGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp GGGGGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGGCCCCGCCTGAGGAATaGGACAACAGCGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: GGPHTPAGTHHPVGRCRQAPPEE*DNSDED
Trigger: ATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGC...CTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
CDS CCA 90 bp AGTGCTCACGGTTGGAGGCCACGCGCTCGTACAGCTCTGCCGCTTTaGGGAACAGGTCCTGCAACAGCTTGTAGATGGGCATTGCAATGT +
Preference number: 5 (lower is better)
Translates to: SAHGWRPRARTALPL*GTGPATACRWALQC
Trigger: ACATTGCAATGCCCATCTACAAGCTGTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGTACGAGCGCGTGGCCTCCAACCGTGAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CCA 90 bp AGGCACCTCGTACTCCTCATCCAGGAAGTCCAGCGAGTTGTTACTTaGGAGGCCGCGGATGGTGAACTTGTGGGACACCTTGGTCCAGTG +
Preference number: 5 (lower is better)
Translates to: RHLVLLIQEVQRVVT*EAADGELVGHLGPV
Trigger: CACTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTGGACTTCCTGGATGAGGAGTACGAGGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCCGGCATGACCAGCACTaGGGTATCAGGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSRHDQH*GIRSQW
Trigger: CCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCG...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GGGGGTCCTCACACACCAGCTGGGACTCACCATCCAGTAGGTAGGTGTAGACAGCAAGAAAGCTGGAGATaGTCCTCCGACACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GGPHTPAGTHHPVGRCRQQESWR*SSDTSR
Trigger: CCTGCTGGTGTCGGAGGACAATCTCCAGCTTTCTTG...CTGTCTACACCTACCTACTGGATGGTGAGTCCCAGCTGGTGTGTGAGGACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGTCTTCCCCGAGCACTTaGTCTCCGATGACCTTGCAA +
Preference number: 5 (lower is better)
Translates to: EKKREASGRADPRVPALWSSPST*SPMTLQ
Trigger: TTGCAAGGTCATCGGAGACAAAGTGCTCGGGGAAGA...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTTCTTCCCCGAGCACTTaGTCTCCGATGACCTTGCAA +
Preference number: 5 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRSSPST*SPMTLQ
Trigger: TTGCAAGGTCATCGGAGACAAAGTGCTCGGGGAAGA...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp AGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGTCTCCTTCTAGCTTGTaGAAGGCGCAGGCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: STADRASLTARCRPEMSMSPSSL*KAQAKA
Trigger: GGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGA...CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTAAGTCTCCTTCTAGCTaGTTGAAGGCGCAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRKSPSS*LKAQAK
Trigger: CTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGACTT...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATGCCTGGCACTCACACTaGAGTTTCTGTTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHAWHSH*SFCSFW
Trigger: CCAGAAGGAACAGAAACTCAAGTGTGAGTGCCAGGC...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp CAGAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATAGGTCCTCGTCGAACTaGCTGAACCATGGCCCATTG +
Preference number: 5 (lower is better)
Translates to: QRKREKPVAGLTQESRPYRSSSN*LNHGPL
Trigger: CAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCT...ATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp CCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGGCCTCATTCACTTTTTaGTATAGGAGAGAATGGGCG +
Preference number: 5 (lower is better)
Translates to: PVALFPVHLARPVEGCGRASFTF*YRREWA
Trigger: CGCCCATTCTCTCCTATACAAAAAAGTGAATGAGGC...CCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCGCCTCATTCACTTTTTaGTATAGGAGAGAATGGGCG +
Preference number: 5 (lower is better)
Translates to: GSVPSASGQTSGGLWEVAASFTF*YRREWA
Trigger: CGCCCATTCTCTCCTATACAAAAAAGTGAATGAGGC...GGCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTTACATCATCATCTCATaGGCCAGGTGGCTGCGATAC +
Preference number: 5 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAYIIIS*ARWLRY
Trigger: GTATCGCAGCCACCTGGCCAATGAGATGATGATGTA...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp TTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTATCTTCTGGAGGTCCTaGAAGATGCGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: LSYPLPVWPRQGKRLAQRIFWRS*KMRRWW
Trigger: CCACCATCTCCGCATCTTCAAGGACCTCCAGAAGAT...ACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGATCTCCATCGGCCTGTaGCCCATGGCCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRISIGL*PMAFSR
Trigger: CCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGAT...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGCCGCGGATGGTGAACTaGTGGGACACCTTGGTCCAG +
Preference number: 5 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQPRMVN*WDTLVQ
Trigger: CTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGG...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGAGGAAGTCCAGCGAGTaGTTACTTGGGAGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQRKSSE*LLGRPR
Trigger: CCGCGGCCTCCCAAGTAACAACTCGCTGGACTTCCT...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTAGGCTGCAGCAGCCATaGATGGGGGCCCTAGTGCCA +
Preference number: 5 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPRLQQP*MGALVP
Trigger: TGGCACTAGGGCCCCCATCAATGGCTGCTGCAGCCT...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGATCTTAGAGCATGGATaGTCTTACCCGCTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: QDPWLCSQCIWPDQWRAVILEHG*SYPLPV
Trigger: AACAGGGAGCGGGTAAGACAATCCATGCTCTAAGAT...CACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp AAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGGGTCTCATCTTAGAGCATGGATaGTCTTACCCGCTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: KREASGRADPRVPALWGLILEHG*SYPLPV
Trigger: AACAGGGAGCGGGTAAGACAATCCATGCTCTAAGAT...GAGACCCCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTGCCCCGCCTGAGGAATaGGACAACAGCGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRAPPEE*DNSDED
Trigger: ATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGC...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CAGAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATAGGTATTGGAGCACTTaGAGCTGCAGGGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: QRKREKPVAGLTQESRPYRYWST*SCREEA
Trigger: TGCCTCTTCCCTGCAGCTCAAAGTGCTCCAATACCT...ATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGACCCGTCAAGAAAGCTGGAGATaGTCCTCCGACACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VVLVQGHTGSPGLGPRTRQESWR*SSDTSR
Trigger: CCTGCTGGTGTCGGAGGACAATCTCCAGCTTTCTTG...ACGGGTCCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTCTCCTTCTAGCTTGTaGAAGGCGCAGGCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSSPSSL*KAQAKA
Trigger: GGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGA...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGTCTCCTTCTAGCTTGTaGAAGGCGCAGGCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQSPSSL*KAQAKA
Trigger: GGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGA...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCATGGCCCATTGATCTaGTTCACCAGCTCGGCCACA +
Preference number: 5 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTHGPLI*FTSSAT
Trigger: TGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATG...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp TGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCGCCTCATTCACTTTTTaGTATAGGAGAGAATGGGCG +
Preference number: 5 (lower is better)
Translates to: WLCSQCIWPDQWRAVGGGASFTF*YRREWA
Trigger: CGCCCATTCTCTCCTATACAAAAAAGTGAATGAGGC...GCCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GAGAAAAAGAGAGAAGCCAGTGGCCGGGCTGACCCAAGAGTCCCGGCCCTATGGTACATCATCATCTCATaGGCCAGGTGGCTGCGATAC +
Preference number: 5 (lower is better)
Translates to: EKKREASGRADPRVPALWYIIIS*ARWLRY
Trigger: GTATCGCAGCCACCTGGCCAATGAGATGATGATGTA...CCATAGGGCCGGGACTCTTGGGTCAGCCCGGCCACTGGCTTCTCTCTTTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAGGTGGCCATCATGGAGAAGTTaGGTATACTCATCATCGGAG +
Preference number: 5 (lower is better)
Translates to: VALFPVHLARPVEGCGRWPSWRS*VYSSSE
Trigger: CTCCGATGATGAGTATACCAAACTTCTCCATGATGG...CCACCTCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGGCCACCTGGAAAGAGTaGTTTGTGCCTCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRATWKE*FVPLWS
Trigger: GGACCACAGAGGCACAAACAACTCTTTCCAGGTGGC...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp AAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATAACTTGTGGGACACCTaGGTCCAGTGCTCACGGTTG +
Preference number: 5 (lower is better)
Translates to: KRLAQRHTGRRKHGWLIHNLWDT*VQCSRL
Trigger: CAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTT...ATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTAGGCTGCAGCAGCCATaGATGGGGGCCCTAGTGCCA +
Preference number: 5 (lower is better)
Translates to: TQGWALCALGLQKHSIASRLQQP*MGALVP
Trigger: TGGCACTAGGGCCCCCATCAATGGCTGCTGCAGCCT...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp GACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCAGTGGAGGGCTGTGGGAAAAGTCTCCGTGAGGTaGGAAGTCTTGCTTCCATTA +
Preference number: 5 (lower is better)
Translates to: DPWLCSQCIWPDQWRAVGKVSVR*EVLLPL
Trigger: TAATGGAAGCAAGACTTCCAACCTCACGGAGACTTT...TCCCACAGCCCTCCACTGGTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCAGCGTCACACAGGCAGGAGGAAGCATGGCTGGCTCATTCATACCTGGGCCTGCTCTGTGCCTTAGGGTaGCAGAAACATTCCATAGCC +
Preference number: 5 (lower is better)
Translates to: PASHRQEEAWLAHSYLGLLCALG*QKHSIA
Trigger: GGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAG...CAGGCCCAGGTATGAATGAGCCAGCCATGCTTCCTCCTGCCTGTGTGACGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GAGACGTCATCCAGGTGGGTGAAGAGGTTCTTTGCCACTTGGAGAAGAGCCTGGCTGAGACACTCAGGGTaGGGCTCTCTGTGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: ETSSRWVKRFFATWRRAWLRHSG*GSLCLR
Trigger: CCTAAGGCACAGAGAGCCCAACCCTGAGTGTCTCAG...CCAGGCTCTTCTCCAAGTGGCAAAGAACCTCTTCACCCACCTGGATGACGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCCAGGTGGATATGGCCTaGAAGAGAGAGCCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSQVDMA*KREPCQ
Trigger: CTGGCAGGGCTCTCTCTTCAAGGCCATATCCACCTG...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp GGGCTCAGGCCAAGGGGAACACTCAGGGGGCCTCTGAGACACTCAGGGTTGGGCGACCATATACGACAGTaGCACAGAGTCCTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: GLRPRGTLRGPLRHSGLGDHIRQ*HRVLEK
Trigger: TTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTC...GCCCAACCCTGAGTGTCTCAGAGGCCCCCTGAGTGTTCCCCTTGGCCTGAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGGCCCCGCCTGAGGAATaGGACAACAGCGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKAPPEE*DNSDED
Trigger: ATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGC...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGTCTTCCCCGAGCACTTaGTCTCCGATGACCTTGCAA +
Preference number: 5 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRSSPST*SPMTLQ
Trigger: TTGCAAGGTCATCGGAGACAAAGTGCTCGGGGAAGA...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTAGCTGGATGGACTTCTaGTCTTCCACCACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSSWMDF*SSTTWP
Trigger: GGGCCAGGTGGTGGAAGACAAGAAGTCCATCCAGCT...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp ACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACTCTCCTTCTAGCTTGTaGAAGGCGCAGGCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: TLCSLRCLTFPFHEDPGDSPSSL*KAQAKA
Trigger: GGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGA...GTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR CAA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCAAGTCTCCTTCTAGCTaGTTGAAGGCGCAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTKSPSS*LKAQAK
Trigger: CTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGACTT...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCCATGGCCCATTGATCTaGTTCACCAGCTCGGCCACA +
Preference number: 5 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSHGPLI*FTSSAT
Trigger: TGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATG...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGCATGGCCCATTGATCTaGTTCACCAGCTCGGCCACA +
Preference number: 5 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRHGPLI*FTSSAT
Trigger: TGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATG...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGCTGAACCATGGCCCATaGATCTTGTTCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRLNHGP*ILFTSS
Trigger: CGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAG...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp AGCTCACAGCCCAACATGCTCTGCAGCTGTTGTACATCCTCGGAGGTGAGGTCCCTGAACCATGGCCCATaGATCTTGTTCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SSQPNMLCSCCTSSEVRSLNHGP*ILFTSS
Trigger: CGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAG...GGACCTCACCTCCGAGGATGTACAACAGCTGCAGAGCATGTTGGGCTGTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGAGGTCCTCGTCGAACTaGCTGAACCATGGCCCATTG +
Preference number: 5 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKRSSSN*LNHGPL
Trigger: CAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCT...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCCATTGATCTTGTTCACCAGCTCGGCCACACCGATGACCTCCTGGTTCTCGTTAGGTCCTCGTCGAACTaGCTGAACCATGGCCCATTG +
Preference number: 5 (lower is better)
Translates to: PIDLVHQLGHTDDLLVLVRSSSN*LNHGPL
Trigger: CAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCT...AACGAGAACCAGGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp CCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGAGGAAGCATGGCTGCCTCATTCACTTTTTaGTATAGGAGAGAATGGGCG +
Preference number: 5 (lower is better)
Translates to: PDRGRDSPSVTQAGGSMAASFTF*YRREWA
Trigger: CGCCCATTCTCTCCTATACAAAAAAGTGAATGAGGC...AGCCATGCTTCCTCCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp TCCTGGTCTAGGACCCAGGACCCGTGGCTCTGTTCCCAGTGCATCTGGCCAGACCCATCATGGAGAAGTTaGGTATACTCATCATCGGAG +
Preference number: 5 (lower is better)
Translates to: SWSRTQDPWLCSQCIWPDPSWRS*VYSSSE
Trigger: CTCCGATGATGAGTATACCAAACTTCTCCATGATGG...GTCTGGCCAGATGCACTGGGAACAGAGCCACGGGTCCTGGGTCCTAGACCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCTGGAAAGAGTTGTTaGTGCCTCTGTGGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSPGKSC*CLCGPG
Trigger: ACCTGGACCACAGAGGCACAAACAACTCTTTCCAGG...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGTAGTCTTCCAGCCCTaGGTCTGGTCAGAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQVVFQP*VWSERS
Trigger: TGACCTCTCTGACCAGACCAAGGGCTGGAAGACTAC...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTATCTCCATCGGCCTGTaGCCCATGGCCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GAEMGQGETIKLLRQRMAISIGL*PMAFSR
Trigger: CCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGAT...AGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCCAGGTGGATATGGCCTaGAAGAGAGAGCCCTGCCAG +
Preference number: 5 (lower is better)
Translates to: KRISLKATQKGKAGGPPPQVDMA*KREPCQ
Trigger: CTGGCAGGGCTCTCTCTTCAAGGCCATATCCACCTG...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp CTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCCCAGCGTCACACAGGCAGGGACCATATACGACAGTaGCACAGAGTCCTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: LPVWPRQGKRLAQRHTGRDHIRQ*HRVLEK
Trigger: TTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTC...CCTGCCTGTGTGACGCTGGGCGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp CCATTCCTCATTATCACTCAGCTGGCCACAGTGCACCAAGATGACAGCTGCCACGCCCCGCCTGAGGAATaGGACAACAGCGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: PFLIITQLATVHQDDSCHAPPEE*DNSDED
Trigger: ATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGC...GTGGCAGCTGTCATCTTGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539367.5
ENST00000543750.5
CDS-3UTR CAA 90 bp GGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTTGGGAAAGACTTGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: GQGETIKLLRQRMAWERLADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...AAGTCTTTCCCAAGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGAGGTATTGGAGCACTTaGAGCTGCAGGGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQRYWST*SCREEA
Trigger: TGCCTCTTCCCTGCAGCTCAAAGTGCTCCAATACCT...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp ATCTGGTGGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAGCTGGATGGACTTCTaGTCTTCCACCACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: IWWGRNGARRNHQAAQTKSWMDF*SSTTWP
Trigger: GGGCCAGGTGGTGGAAGACAAGAAGTCCATCCAGCT...CTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR CAA 90 bp GCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCGCCTGGCACTCACACTaGAGTTTCTGTTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: AVSPRDHIRQLHRVLEKRAWHSH*SFCSFW
Trigger: CCAGAAGGAACAGAAACTCAAGTGTGAGTGCCAGGC...GCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGAGGTTCTTTGCCACTaGGAGAAGAGCCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPEVLCH*EKSLAL
Trigger: GAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCTC...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTTCTCGTTCTaGATGGGGAAGCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKSWFSF*MGKQRM
Trigger: CATCCTCTGCTTCCCCATCAAGAACGAGAACCAGGA...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp TCATACCTGGGCCTGTCTCCCAGTGCGGGGATCCCTCCTGCCCATCAATCCCATGCCTCATTCACTTTTTaGTATAGGAGAGAATGGGCG +
Preference number: 5 (lower is better)
Translates to: SYLGLSPSAGIPPAHQSHASFTF*YRREWA
Trigger: CGCCCATTCTCTCCTATACAAAAAAGTGAATGAGGC...ATGGGATTGATGGGCAGGAGGGATCCCCGCACTGGGAGACAGGCCCAGGTATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GTGTGGTCAGAGGTGCAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTGCTCGCCTCATTCACTTTTTaGTATAGGAGAGAATGGGCG +
Preference number: 5 (lower is better)
Translates to: VWSEVQSRAHCSLVTPVLASFTF*YRREWA
Trigger: CGCCCATTCTCTCCTATACAAAAAAGTGAATGAGGC...GAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTGCACCTCTGACCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp GAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGTACATCATCATCTCATaGGCCAGGTGGCTGCGATAC +
Preference number: 5 (lower is better)
Translates to: EAQEGSTCPGSHRKSWSRYIIIS*ARWLRY
Trigger: GTATCGCAGCCACCTGGCCAATGAGATGATGATGTA...CCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGCCTGGAAAGAGTTGTTaGTGCCTCTGTGGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: QEGSTCPGSHRKSWSRTQPGKSC*CLCGPG
Trigger: ACCTGGACCACAGAGGCACAAACAACTCTTTCCAGG...CTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGCCTGGAAAGAGTTGTTaGTGCCTCTGTGGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: DEKAEAQEGSTCPGSHRKPGKSC*CLCGPG
Trigger: ACCTGGACCACAGAGGCACAAACAACTCTTTCCAGG...CTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp AGCACAGCTGACAGGGCCTCCTTGACAGCACGTTGCAGGCCTGAAATGTCGATGCTCTGTGCCTTAGGGTaGCAGAAACATTCCATAGCC +
Preference number: 5 (lower is better)
Translates to: STADRASLTARCRPEMSMLCALG*QKHSIA
Trigger: GGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAG...CATCGACATTTCAGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGCTGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp CAAAGCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAACTGAGACACTCAGGGTaGGGCTCTCTGTGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: QSGQPTGPYTTVAQSPRKLRHSG*GSLCLR
Trigger: CCTAAGGCACAGAGAGCCCAACCCTGAGTGTCTCAG...TTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS TCA 90 bp CCACACAAAATGTTAGAAAAACAGGGTTGGGAGGGATGCAAACCCTaGGGTCACATGCCCTGGGCATGGTTGGTCCAAGAGCAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PHKMLEKQGWEGCKP*GHMPWAWLVQEQPL
Trigger: CAAGGGCTGCTCTTGGACCAACCATGCCCAGGGCATGTGACCTCAGGGTTTGCATCCCTCCCAACCCTGTTTTTCTAACATTTTGTGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420501.5
CDS-3UTR CAA 90 bp CCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTACACAGTTGGAGGATCTaGCGGTCGCGGTCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: PRDHIRQLHRVLEKRISLHSWRI*RSRSVY
Trigger: GTACACCGACCGCGACCGCAAGATCCTCCAACTGTG...TAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTAGGTATTGGAGCACTTaGAGCTGCAGGGAAGAGGCA +
Preference number: 5 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSRYWST*SCREEA
Trigger: TGCCTCTTCCCTGCAGCTCAAAGTGCTCCAATACCT...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTCAAGAAAGCTGGAGATaGTCCTCCGACACCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GAEMGQGETIKLLRQRMAQESWR*SSDTSR
Trigger: CCTGCTGGTGTCGGAGGACAATCTCCAGCTTTCTTG...AGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR CAA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTTCTTCCCCGAGCACTTaGTCTCCGATGACCTTGCAA +
Preference number: 5 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSSSPST*SPMTLQ
Trigger: TTGCAAGGTCATCGGAGACAAAGTGCTCGGGGAAGA...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTCATGCTCTGCAGCTGTaGTACATCCTCGGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: TQGWALCALGLQKHSIASHALQL*YILGGE
Trigger: CTCACCTCCGAGGATGTACAACAGCTGCAGAGCATG...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp CAGAGTAGGGCCCACTGCTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTATCTCCTTCTAGCTTGTaGAAGGCGCAGGCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: QSRAHCSLVTPVLSENKLSPSSL*KAQAKA
Trigger: GGCCTTGGCCTGCGCCTTCAACAAGCTAGAAGGAGA...TAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTGGGCCCTACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334456.10
ENST00000444035.6
CDS-3UTR CAA 90 bp ACGAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTGCCTGGCACTCACACTaGAGTTTCTGTTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: TRKLRPRKVVLVQGHTGSAWHSH*SFCSFW
Trigger: CCAGAAGGAACAGAAACTCAAGTGTGAGTGCCAGGC...ACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGCCTGGCACTCACACTaGAGTTTCTGTTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPAWHSH*SFCSFW
Trigger: CCAGAAGGAACAGAAACTCAAGTGTGAGTGCCAGGC...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACGGGAAGCAGAGGATGTaGCGCGTGCGGAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDGKQRM*RVRKPV
Trigger: CACCGGCTTCCGCACGCGCAACATCCTCTGCTTCCC...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCCCTGGAAAGAGTTGTTaGTGCCTCTGTGGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: KRISLKATQKGKAGGPPPPGKSC*CLCGPG
Trigger: ACCTGGACCACAGAGGCACAAACAACTCTTTCCAGG...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp CAAAGCGGTCAGCCCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAGTAGTCTTCCAGCCCTaGGTCTGGTCAGAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: QSGQPTGPYTTVAQSPRKVVFQP*VWSERS
Trigger: TGACCTCTCTGACCAGACCAAGGGCTGGAAGACTAC...TTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGGGCTGACCGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGCAGACAAAGAATGGCTaGGGAAAGACTTGCCAAGGT +
Preference number: 5 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSQTKNG*GKTCQG
Trigger: ACCTTGGCAAGTCTTTCCCAAGCCATTCTTTGTCTG...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGCTCTGTGCCTTAGGGTaGCAGAAACATTCCATAGCC +
Preference number: 5 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRLCALG*QKHSIA
Trigger: GGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAG...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp GGGACTCCGCAGAGCGATAGAGCTATTTTAGACATTGATCTAAAATGGATCTTAACGGCCCCAGCCTCCTaGTCCGCTAGCGGCATGACC +
Preference number: 5 (lower is better)
Translates to: GTPQSDRAILDIDLKWILTAPAS*SASGMT
Trigger: GGTCATGCCGCTAGCGGACAAGGAGGCTGGGGCCGT...TAAGATCCATTTTAGATCAATGTCTAAAATAGCTCTATCGCTCTGCGGAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GTTTCCAAGATGCCACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGTCCTGGTTCTCGTTCTaGATGGGGAAGCAGAGGATG +
Preference number: 5 (lower is better)
Translates to: VSKMPHSAHSDVSPSPSMSWFSF*MGKQRM
Trigger: CATCCTCTGCTTCCCCATCAAGAACGAGAACCAGGA...CATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGTGGCATCTTGGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTCTGAACCATGGCCCATaGATCTTGTTCACCAGCTCG +
Preference number: 5 (lower is better)
Translates to: TQGWALCALGLQKHSIASLNHGP*ILFTSS
Trigger: CGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAG...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp AAACGCATCTCTCTAAAGGCAACTCAGAAAGGTAAGGCAGGTGGACCCCCTCCCTACATCATCATCTCATaGGCCAGGTGGCTGCGATAC +
Preference number: 5 (lower is better)
Translates to: KRISLKATQKGKAGGPPPYIIIS*ARWLRY
Trigger: GTATCGCAGCCACCTGGCCAATGAGATGATGATGTA...GGGAGGGGGTCCACCTGCCTTACCTTTCTGAGTTGCCTTTAGAGAGATGCGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCCATCATGGAGAAGTTaGGTATACTCATCATCGGAG +
Preference number: 5 (lower is better)
Translates to: AQEGSTCPGSHRKSWSRTPSWRS*VYSSSE
Trigger: CTCCGATGATGAGTATACCAAACTTCTCCATGATGG...GGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GGGACTCACCATCCAGTAGGTAGGTGTAGACAGTTTCCACTCGGGGGAGCACAGCCATCATGGAGAAGTTaGGTATACTCATCATCGGAG +
Preference number: 5 (lower is better)
Translates to: GTHHPVGRCRQFPLGGAQPSWRS*VYSSSE
Trigger: CTCCGATGATGAGTATACCAAACTTCTCCATGATGG...CTGTGCTCCCCCGAGTGGAAACTGTCTACACCTACCTACTGGATGGTGAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539367.5
CDS-3UTR CAA 90 bp ATCTGGTGGGGCAGAAATGGGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGATCTTCTGGAGGTCCTaGAAGATGCGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: IWWGRNGARRNHQAAQTKIFWRS*KMRRWW
Trigger: CCACCATCTCCGCATCTTCAAGGACCTCCAGAAGAT...CTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCCCATTTCTGCCCCACCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACCGGCATGACCAGCACTaGGGTATCAGGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDRHDQH*GIRSQW
Trigger: CCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCG...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTCGGCATGACCAGCACTaGGGTATCAGGAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: TPVLSENKLQSLREVGSLRHDQH*GIRSQW
Trigger: CCACTGGCTCCTGATACCCAAGTGCTGGTCATGCCG...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp AGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTTTGTCTCCGATGACCTaGCAAGAAAGCTGGAGATTG +
Preference number: 5 (lower is better)
Translates to: RKLRPRKVVLVQGHTGSPLSPMT*QESWRL
Trigger: CAATCTCCAGCTTTCTTGCAAGGTCATCGGAGACAA...AGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GAGAAAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCCCATCATGGAGAAGTTaGGTATACTCATCATCGGAG +
Preference number: 5 (lower is better)
Translates to: EKAEAQEGSTCPGSHRKSPSWRS*VYSSSE
Trigger: CTCCGATGATGAGTATACCAAACTTCTCCATGATGG...GGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCACGGGACCATATACGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAGCCACCTGGAAAGAGTaGTTTGTGCCTCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: PRDHIRQLHRVLEKRISLATWKE*FVPLWS
Trigger: GGACCACAGAGGCACAAACAACTCTTTCCAGGTGGC...TAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTCCCGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp CACTGCTCATTGGTCACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTTACAGCTCTGCCGCTTaGGGGAACAGGTCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: HCSLVTPVLSENKLQSLRYSSAA*GNRSCN
Trigger: GTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGTA...ACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGTGACCAATGAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp CCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTGCTAGGAAGTCCAGCGAGTaGTTACTTGGGAGGCCGCGG +
Preference number: 5 (lower is better)
Translates to: PVLSENKLQSLREVGSLARKSSE*LLGRPR
Trigger: CCGCGGCCTCCCAAGTAACAACTCGCTGGACTTCCT...AGCAAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp AGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTCTAGGACCCAGGAAAGTCTCCGTGAGGTaGGAAGTCTTGCTTCCATTA +
Preference number: 5 (lower is better)
Translates to: RKVVLVQGHTGSPGLGPRKVSVR*EVLLPL
Trigger: TAATGGAAGCAAGACTTCCAACCTCACGGAGACTTT...CCTGGGTCCTAGACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp AAGCTGAGGCCCAGGAAGGTAGTACTTGTCCAGGGTCACACAGGAAGTCCTGGTAAAGTCTCCGTGAGGTaGGAAGTCTTGCTTCCATTA +
Preference number: 5 (lower is better)
Translates to: KLRPRKVVLVQGHTGSPGKVSVR*EVLLPL
Trigger: TAATGGAAGCAAGACTTCCAACCTCACGGAGACTTT...ACCAGGACTTCCTGTGTGACCCTGGACAAGTACTACCTTCCTGGGCCTCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp ACACTCTGCTCACTCAGATGTCTCACCTTCCCCTTCCATGAGGATCCTGGAGACATCTTAGAGCATGGATaGTCTTACCCGCTCCCTGTT +
Preference number: 5 (lower is better)
Translates to: TLCSLRCLTFPFHEDPGDILEHG*SYPLPV
Trigger: AACAGGGAGCGGGTAAGACAATCCATGCTCTAAGAT...GTCTCCAGGATCCTCATGGAAGGGGAAGGTGAGACATCTGAGTGAGCAGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp AGCATGGATTGTCTTACCCGCTCCCTGTTTGGCCCAGACAGGGGAAGAGACTCGGACCATATACGACAGTaGCACAGAGTCCTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: SMDCLTRSLFGPDRGRDSDHIRQ*HRVLEK
Trigger: TTTTTCTAGGACTCTGTGCAACTGTCGTATATGGTC...CGAGTCTCTTCCCCTGTCTGGGCCAAACAGGGAGCGGGTAAGACAATCCATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTGCTGACAGGGCCTCCTaGACAGCACGTTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LDIDLKWILEHGLSYPLPADRAS*TARCRP
Trigger: AGGCCTGCAACGTGCTGTCAAGGAGGCCCTGTCAGC...AGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp ACTCAGGGTTGGGCTCTCTGTGCCTTAGGGTTGCAGAAACATTCCATAGCCTCTTTGTCTCCGATGACCTaGCAAGAAAGCTGGAGATTG +
Preference number: 5 (lower is better)
Translates to: TQGWALCALGLQKHSIASLSPMT*QESWRL
Trigger: CAATCTCCAGCTTTCTTGCAAGGTCATCGGAGACAA...AGAGGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAGAGCCCAACCCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGTACAGCTCTGCCGCTTaGGGGAACAGGTCCTGCAAC +
Preference number: 5 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQYSSAA*GNRSCN
Trigger: GTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGTA...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp CCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTGCTGCCCCGCCTGAGGAATaGGACAACAGCGATGAGGAT +
Preference number: 5 (lower is better)
Translates to: PVLSENKLQSLREVGSLAAPPEE*DNSDED
Trigger: ATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGC...AGCAAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTGCTCTCCTGCTGCAGGTATaGGAGCACTTTGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PVLSENKLQSLREVGSLALLLQV*EHFELQ
Trigger: CTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGAG...AGCAAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTCTCCTGCTGCAGGTATaGGAGCACTTTGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TPVLSENKLQSLREVGSLLLLQV*EHFELQ
Trigger: CTGCAGCTCAAAGTGCTCCAATACCTGCAGCAGGAG...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTCATGCTCTGCAGCTGTaGTACATCCTCGGAGGTGAG +
Preference number: 5 (lower is better)
Translates to: TPVLSENKLQSLREVGSLHALQL*YILGGE
Trigger: CTCACCTCCGAGGATGTACAACAGCTGCAGAGCATG...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAAGAGGTTCTTTGCCACTaGGAGAAGAGCCTGGCACTC +
Preference number: 5 (lower is better)
Translates to: RQLHRVLEKRISLKATQKEVLCH*EKSLAL
Trigger: GAGTGCCAGGCTCTTCTCCAAGTGGCAAAGAACCTC...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp TCAAAGGGAAAGGAGCAAAGATCTGGTGGGGCAGAAATGGGGCAAGGAGAAACCCCATCATGGAGAAGTTaGGTATACTCATCATCGGAG +
Preference number: 5 (lower is better)
Translates to: SKGKEQRSGGAEMGQGETPSWRS*VYSSSE
Trigger: CTCCGATGATGAGTATACCAAACTTCTCCATGATGG...GGTTTCTCCTTGCCCCATTTCTGCCCCACCAGATCTTTGCTCCTTTCCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTGCCACCTGGAAAGAGTaGTTTGTGCCTCTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: TPVLSENKLQSLREVGSLATWKE*FVPLWS
Trigger: GGACCACAGAGGCACAAACAACTCTTTCCAGGTGGC...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp GGGACTCCGCAGAGCGATAGAGCTATTTTAGACATTGATCTAAAATGGATCTTAATCTCCATCGGCCTGTaGCCCATGGCCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GTPQSDRAILDIDLKWILISIGL*PMAFSR
Trigger: CCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGAT...TAAGATCCATTTTAGATCAATGTCTAAAATAGCTCTATCGCTCTGCGGAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp AATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACAGAACTTGTGGGACACCTaGGTCCAGTGCTCACGGTTG +
Preference number: 5 (lower is better)
Translates to: NRFILMYKAVSPRDHIRQNLWDT*VQCSRL
Trigger: CAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTT...CTGTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp TCAAAGGGAAAGGAGCAAAGATCTGGTGGGGCAGAAATGGGGCAAGGAGAAACCAAAGTCTCCGTGAGGTaGGAAGTCTTGCTTCCATTA +
Preference number: 5 (lower is better)
Translates to: SKGKEQRSGGAEMGQGETKVSVR*EVLLPL
Trigger: TAATGGAAGCAAGACTTCCAACCTCACGGAGACTTT...GGTTTCTCCTTGCCCCATTTCTGCCCCACCAGATCTTTGCTCCTTTCCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACGCCTGGCACTCACACTaGAGTTTCTGTTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDAWHSH*SFCSFW
Trigger: CCAGAAGGAACAGAAACTCAAGTGTGAGTGCCAGGC...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GGGCAAGGAGAAACCATCAAGCTGCTCAGACAAAGAATGGCTTGGGAAAGACTTCAGACAAAGAATGGCTaGGGAAAGACTTGCCAAGGT +
Preference number: 5 (lower is better)
Translates to: GQGETIKLLRQRMAWERLQTKNG*GKTCQG
Trigger: ACCTTGGCAAGTCTTTCCCAAGCCATTCTTTGTCTG...AAGTCTTTCCCAAGCCATTCTTTGTCTGAGCAGCTTGATGGTTTCTCCTTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTTACATCATCATCTCATaGGCCAGGTGGCTGCGATAC +
Preference number: 5 (lower is better)
Translates to: TPVLSENKLQSLREVGSLYIIIS*ARWLRY
Trigger: GTATCGCAGCCACCTGGCCAATGAGATGATGATGTA...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTCTCTGTGCCTTAGGGTaGCAGAAACATTCCATAGCC +
Preference number: 5 (lower is better)
Translates to: TPVLSENKLQSLREVGSLLCALG*QKHSIA
Trigger: GGCTATGGAATGTTTCTGCAACCCTAAGGCACAGAG...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp CGACAGTTGCACAGAGTCCTAGAAAAACGCATCTCTCTAAAGGCAACTCAGAAATTGTCTCCGATGACCTaGCAAGAAAGCTGGAGATTG +
Preference number: 5 (lower is better)
Translates to: RQLHRVLEKRISLKATQKLSPMT*QESWRL
Trigger: CAATCTCCAGCTTTCTTGCAAGGTCATCGGAGACAA...TTTCTGAGTTGCCTTTAGAGAGATGCGTTTTTCTAGGACTCTGTGCAACTGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTTTGTCTCCGATGACCTaGCAAGAAAGCTGGAGATTG +
Preference number: 5 (lower is better)
Translates to: TPVLSENKLQSLREVGSLLSPMT*QESWRL
Trigger: CAATCTCCAGCTTTCTTGCAAGGTCATCGGAGACAA...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000544570.5
CDS-3UTR CAA 90 bp TTAGACATTGATCTAAAATGGATCTTAGAGCATGGATTGTCTTACCCGCTCCCTTCTTCCCCGAGCACTTaGTCTCCGATGACCTTGCAA +
Preference number: 5 (lower is better)
Translates to: LDIDLKWILEHGLSYPLPSSPST*SPMTLQ
Trigger: TTGCAAGGTCATCGGAGACAAAGTGCTCGGGGAAGA...AGGGAGCGGGTAAGACAATCCATGCTCTAAGATCCATTTTAGATCAATGTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACCAGACAAAGAATGGCTaGGGAAAGACTTGCCAAGGT +
Preference number: 5 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDQTKNG*GKTCQG
Trigger: ACCTTGGCAAGTCTTTCCCAAGCCATTCTTTGTCTG...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
CDS-3UTR CAA 90 bp GAAATAGATTTATTCTCATGTACAAAGCGGTCAGCCCACGGGACCATATACGACGCCTCATTCACTTTTTaGTATAGGAGAGAATGGGCG +
Preference number: 5 (lower is better)
Translates to: EIDLFSCTKRSAHGTIYDASFTF*YRREWA
Trigger: CGCCCATTCTCTCCTATACAAAAAAGTGAATGAGGC...GTCGTATATGGTCCCGTGGGCTGACCGCTTTGTACATGAGAATAAATCTATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000539367.5
CDS-3UTR CAA 90 bp ACCCCTGTGCTCTCAGAAAACAAATTACAAAGTCTCCGTGAGGTTGGAAGTCTTCCATCATGGAGAAGTTaGGTATACTCATCATCGGAG +
Preference number: 5 (lower is better)
Translates to: TPVLSENKLQSLREVGSLPSWRS*VYSSSE
Trigger: CTCCGATGATGAGTATACCAAACTTCTCCATGATGG...AAGACTTCCAACCTCACGGAGACTTTGTAATTTGTTTTCTGAGAGCACAGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000444035.6
ENST00000544570.5
CDS CAA 90 bp AGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCCCGCGGCTCAGCCGGTCGCGCTGCC +
Preference number: 6 (lower is better)
Translates to: RLSAHGCGGGGGSSG*RKTCWPRGSAGRAA
Trigger: GGCAGCGCGACCGGCTGAGCCGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000542969.2
CDS TCA 72 bp CGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCCGCGGCTCAGCCGGTC +
Preference number: 6 (lower is better)
Translates to: RMAAAAAAARPA*GRPAGPAAQPV
Trigger: GACCGGCTGAGCCGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000542969.2
CDS CAA 72 bp GCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCCCGCGGCTCAGCCGGT +
Preference number: 6 (lower is better)
Translates to: AHGCGGGGGSSG*RKTCWPRGSAG
Trigger: ACCGGCTGAGCCGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000542969.2
CDS TCA 72 bp CGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCCGCAGACACCGAGCGC +
Preference number: 6 (lower is better)
Translates to: RMAAAAAAARPA*GRPAGPADTER
Trigger: GCGCTCGGTGTCTGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485058.7
CDS CAA 72 bp GCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCCCGCAGACACCGAGCG +
Preference number: 6 (lower is better)
Translates to: AHGCGGGGGSSG*RKTCWPRRHRA
Trigger: CGCTCGGTGTCTGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485058.7
CDS CCA 72 bp CAGCTGGCCACAGTGCACCTGCAGGCTGTCGGCGCATaGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAG +
Preference number: 6 (lower is better)
Translates to: QLATVHLQAVGA*LRRRRRLVRLE
Trigger: CTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCTGCAGGTGCACTGTGGCCAGCTG
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418754.6
CDS CAA 72 bp GCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCCCGCTGTGTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: AHGCGGGGGSSG*RKTCWPRCVSS
Trigger: GCTGGACACACAGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536458.1
CDS CAA 90 bp AGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCCCGCAGACACCGAGCGCACACACGG +
Preference number: 6 (lower is better)
Translates to: RLSAHGCGGGGGSSG*RKTCWPRRHRAHTR
Trigger: CCGTGTGTGCGCTCGGTGTCTGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485058.7
CDS TCA 72 bp CGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTaGGGAAGACCTGCTGGCCCCGCTGTGTGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: RMAAAAAAARPA*GRPAGPAVCPA
Trigger: AGCTGGACACACAGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536458.1
CDS GCA 72 bp TGGCCCCGCGGCTCAGCCGGTCGCGCTGCCGGGTACTaGTGGCTCCTGCAGAGGATGGAGTGGCCGCATGCC +
Preference number: 6 (lower is better)
Translates to: WPRGSAGRAAGY*WLLQRMEWPHA
Trigger: GGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCGCGGGGCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000542969.2
CDS CCA 72 bp CCCCGCGGCTCAGCCGGTCGCGCTGCCGGGTACTGCTaGCTCCTGCAGAGGATGGAGTGGCCGCATGCCTGC +
Preference number: 6 (lower is better)
Translates to: PRGSAGRAAGYC*LLQRMEWPHAC
Trigger: GCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCGCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000542969.2
CDS CCA 72 bp CAGACTCAGCAAGGCGTCCTGCAGGCTGTCGGCGCATaGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAG +
Preference number: 6 (lower is better)
Translates to: QTQQGVLQAVGA*LRRRRRLVRLE
Trigger: CTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCTGCAGGACGCCTTGCTGAGTCTG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000536308.5
ENST00000540345.5
ENST00000544570.5
CDS CAA 72 bp GCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCCCGCCTGAGGAATTGG +
Preference number: 6 (lower is better)
Translates to: AHGCGGGGGSSG*RKTCWPRLRNW
Trigger: CCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000536308.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
ENST00000544570.5
CDS GCA 72 bp CCAGGCTGGGGCTCAGCCGGTCGCGCTGCCGGGTACTaGTGGCTCCTGCAGAGGATGGAGTGGCCGCATGCC +
Preference number: 6 (lower is better)
Translates to: PGWGSAGRAAGY*WLLQRMEWPHA
Trigger: GGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCCCAGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS CCA 72 bp GGCGTCGGCTCAGCCGGTCGCGCTGCCGGGTACTGCTaGCTCCTGCAGAGGATGGAGTGGCCGCATGCCTGC +
Preference number: 6 (lower is better)
Translates to: GVGSAGRAAGYC*LLQRMEWPHAC
Trigger: GCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCGACGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540380.5
CDS CAA 90 bp AGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCCCGCCTGAGGAATTGGACAACAGCG +
Preference number: 6 (lower is better)
Translates to: RLSAHGCGGGGGSSG*RKTCWPRLRNWTTA
Trigger: CGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000536308.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
ENST00000544570.5
CDS CAA 90 bp AGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTaGAGGAAGACCTGCTGGCCCCGCTGTGTGTCCAGCTTGGTCCAA +
Preference number: 6 (lower is better)
Translates to: RLSAHGCGGGGGSSG*RKTCWPRCVSSLVQ
Trigger: TTGGACCAAGCTGGACACACAGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536458.1
CDS GCA 72 bp GAAGACCTGCTGGCCCCGCGGCTCAGCCGGTCGCGCTaGCGGGTACTGCTGGCTCCTGCAGAGGATGGAGTG +
Preference number: 6 (lower is better)
Translates to: EDLLAPRLSRSR*RVLLAPAEDGV
Trigger: CACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCGCGGGGCCAGCAGGTCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000542969.2
CDS GCA 72 bp CAAGGCGTCGGCTCAGCCGGTCGCGCTGCCGGGTACTaGTGGCTCCTGCAGAGGATGGAGTGGCCGCATGCC +
Preference number: 6 (lower is better)
Translates to: QGVGSAGRAAGY*WLLQRMEWPHA
Trigger: GGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCGACGCCTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540380.5
CDS GCA 72 bp GCAAGGGGGTCCAGGCTGGGGCTCAGCCGGTCGCGCTaGCGGGTACTGCTGGCTCCTGCAGAGGATGGAGTG +
Preference number: 6 (lower is better)
Translates to: ARGSRLGLSRSR*RVLLAPAEDGV
Trigger: CACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCCCAGCCTGGACCCCCTTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535701.1
CDS GCA 72 bp GCTCAGCCGGTCGCGCTGCCGGGTACTGCTGGCTCCTaGAGAGGATGGAGTGGCCGCATGCCTGCCCCATCA +
Preference number: 6 (lower is better)
Translates to: AQPVALPGTAGS*RGWSGRMPAPS
Trigger: TGATGGGGCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000535701.1
ENST00000540380.5
ENST00000542969.2
ENST00000546038.1
CDS GCA 72 bp GGCGGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTaGTGGCCCCGCCTGAGGAATTGGACAACAGCGATG +
Preference number: 6 (lower is better)
Translates to: GGGGGSSGLRKT*WPRLRNWTTAM
Trigger: CATCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000536308.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
ENST00000544570.5
CDS CCA 72 bp GTAGGTGTAGACAGTTTCCTGCAGGCTGTCGGCGCATaGCTGCGGCGGCGGCGGCGGCTCGTCCGGCTTGAG +
Preference number: 6 (lower is better)
Translates to: VGVDSFLQAVGA*LRRRRRLVRLE
Trigger: CTCAAGCCGGACGAGCCGCCGCCGCCGCCGCAGCCATGCGCCGACAGCCTGCAGGAAACTGTCTACACCTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543750.5
CDS GCA 72 bp CCAGACTCAGCAAGGCGTCGGCTCAGCCGGTCGCGCTaGCGGGTACTGCTGGCTCCTGCAGAGGATGGAGTG +
Preference number: 6 (lower is better)
Translates to: PDSARRRLSRSR*RVLLAPAEDGV
Trigger: CACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCGACGCCTTGCTGAGTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540380.5
CDS CCA 72 bp GGCGGCGGCGGCTCGTCCGGCTTGAGGAAGACCTGCTaGCCCCGCCTGAGGAATTGGACAACAGCGATGAGG +
Preference number: 6 (lower is better)
Translates to: GGGGSSGLRKTC*PRLRNWTTAMR
Trigger: CCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCCGGACGAGCCGCCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000536308.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
ENST00000544570.5
CDS GCA 72 bp CATTCCTCATTATCACTCAGCTGGCCACAGTGCACCTaGAGGCTGTCGGCGCATGGCTGCGGCGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: HSSLSLSWPQCT*RLSAHGCGGGG
Trigger: GCCGCCGCCGCCGCAGCCATGCGCCGACAGCCTGCAGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418754.6
CDS GCA 72 bp CTGCAGGGAAGAGGCATCCAGGTCGTAGAGTTCCCCTaGAAGGGCCAGGCGCCGGTCAGAGAGAGGGCCCCT +
Preference number: 6 (lower is better)
Translates to: LQGRGIQVVEFP*KGQAPVRERAP
Trigger: AGGGGCCCTCTCTCTGACCGGCGCCTGGCCCTTGCAGGGGAACTCTACGACCTGGATGCCTCTTCCCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475807.6
CDS CCA 72 bp CACTCCTCATCGTCCGCCTCCCCAGCCAGACTAAGGTaGCACCTCGCCCTGTCCCCGCTGCCTGGAGTTCAG +
Preference number: 6 (lower is better)
Translates to: HSSSSASPARLR*HLALSPLPGVQ
Trigger: CTGAACTCCAGGCAGCGGGGACAGGGCGAGGTGCCACCTTAGTCTGGCTGGGGAGGCGGACGATGAGGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000418754.6
ENST00000535701.1
ENST00000540380.5
ENST00000542969.2
ENST00000546038.1
CDS CCA 72 bp GTCCTCCAGTCGGTCGTCTCTACTCCCTGGGGGTCCTaGCTCCTTTGCAAGGGGGTCCAGGCTGGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: VLQSVVSTPWGS*LLCKGVQAGCR
Trigger: CCTGCAGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGACCGACTGGAGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000444035.6
ENST00000485058.7
ENST00000538749.5
ENST00000539367.5
ENST00000541998.5
ENST00000542969.2
ENST00000543575.5
CDS CCA 72 bp GTCCTCCAGTCGGTCGTCTCTACTCCCTGGGGGTCCTaGCTCCTTTGCAAGGGGGTCCAGGCTGGCCTGAGC +
Preference number: 6 (lower is better)
Translates to: VLQSVVSTPWGS*LLCKGVQAGLS
Trigger: GCTCAGGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGACCGACTGGAGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS CCA 72 bp AAACTTGGCTCAGCCGGTCGCGCTGCCGGGTACTGCTaGCTCCTGCAGAGGATGGAGTGGCCGCATGCCTGC +
Preference number: 6 (lower is better)
Translates to: KLGSAGRAAGYC*LLQRMEWPHAC
Trigger: GCAGGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCAAGTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS CAA 90 bp CGTCCTCCAGTCGGTCGTCTCTACTCCCTGGGGGTCCTGGCTCCTTaGCAAGGGGGTCCAGGCTGGCCTGAGCTCCCGAAACTCCCATGC +
Preference number: 6 (lower is better)
Translates to: RPPVGRLYSLGVLAP*QGGPGWPELPKLPC
Trigger: GCATGGGAGTTTCGGGAGCTCAGGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGACCGACTGGAGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS GCA 72 bp CGCCTGAGGAATTGGACAACAGCGATGAGGATGTGGTaGAGCACCAGGACCATGCTCGCAGCCGCCCGCCCG +
Preference number: 6 (lower is better)
Translates to: RLRNWTTAMRMW*STRTMLAAARP
Trigger: CGGGCGGGCGGCTGCGAGCATGGTCCTGGTGCTGCACCACATCCTCATCGCTGTTGTCCAATTCCTCAGGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000536308.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
ENST00000544570.5
CDS GCA 72 bp TGTAAACTTGGCTCAGCCGGTCGCGCTGCCGGGTACTaGTGGCTCCTGCAGAGGATGGAGTGGCCGCATGCC +
Preference number: 6 (lower is better)
Translates to: CKLGSAGRAAGY*WLLQRMEWPHA
Trigger: GGCATGCGGCCACTCCATCCTCTGCAGGAGCCAGCAGTACCCGGCAGCGCGACCGGCTGAGCCAAGTTTACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546038.1
CDS CCA 72 bp CCCCGCCTGAGGAATTGGACAACAGCGATGAGGATGTaGTGCAGCACCAGGACCATGCTCGCAGCCGCCCGC +
Preference number: 6 (lower is better)
Translates to: PRLRNWTTAMRM*CSTRTMLAAAR
Trigger: GCGGGCGGCTGCGAGCATGGTCCTGGTGCTGCACCACATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000536308.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
ENST00000544570.5
CDS CCA 72 bp CAGCAAGGCGTCCTCCAGTCGGTCGTCTCTACTCCCTaGGGGTCCTGGCTCCTTTGCAAGGGGGTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: QQGVLQSVVSTP*GSWLLCKGVQA
Trigger: AGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGACCGACTGGAGGACGCCTTGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000444035.6
ENST00000485058.7
ENST00000535701.1
ENST00000537631.5
ENST00000538749.5
ENST00000539367.5
ENST00000541998.5
ENST00000542969.2
ENST00000543575.5
CDS CAA 72 bp CTTGGGAGGCCGCGGATGGTGAACTTGTGGGACACCTaGGTCCAGTGCTCACGGTTGGAGGCCACGCGCTCG +
Preference number: 6 (lower is better)
Translates to: LGRPRMVNLWDT*VQCSRLEATRS
Trigger: CGAGCGCGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCCCAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CAA 72 bp GTCGGTCGTCTCTACTCCCTGGGGGTCCTGGCTCCTTaGCAAGGGGGTCCAGGCTGGCCTGAGCTCCCGAAA +
Preference number: 6 (lower is better)
Translates to: VGRLYSLGVLAP*QGGPGWPELPK
Trigger: TTTCGGGAGCTCAGGCCAGCCTGGACCCCCTTGCAAAGGAGCCAGGACCCCCAGGGAGTAGAGACGACCGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS GCA 72 bp AGGCTCCATTCCTCATTATCACTCAGCTGGCCACAGTaGACCTGCAGGCTGTCGGCGCATGGCTGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: RLHSSLSLSWPQ*TCRLSAHGCGG
Trigger: GCCGCCGCAGCCATGCGCCGACAGCCTGCAGGTGCACTGTGGCCAGCTGAGTGATAATGAGGAATGGAGCCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418754.6
CDS GCA 72 bp CCTGCTGGCCCCGCTGTGTGTCCAGCTTGGTCCAACTaGAGAGGCAGCCTCAGTGAAGGCCATGATGGGAGC +
Preference number: 6 (lower is better)
Translates to: PAGPAVCPAWSN*RGSLSEGHDGS
Trigger: GCTCCCATCATGGCCTTCACTGAGGCTGCCTCTGCAGTTGGACCAAGCTGGACACACAGCGGGGCCAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536458.1
CDS CCA 72 bp CTCCCAGTGGCAGCCCCCAGTAGAGGCAACCGTGGATaGGAGGCATGCAAGGCCAACTCCCTTAGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: LPVAAPSRGNRG*EACKANSLRVG
Trigger: TCCCACCCTAAGGGAGTTGGCCTTGCATGCCTCCCATCCACGGTTGCCTCTACTGGGGGCTGCCACTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS CAA 90 bp CCGCGGATGGTGAACTTGTGGGACACCTTGGTCCAGTGCTCACGGTaGGAGGCCACGCGCTCGTACAGCTCTGCCGCTTTGGGGAACAGG +
Preference number: 6 (lower is better)
Translates to: PRMVNLWDTLVQCSR*EATRSYSSAALGNR
Trigger: CCTGTTCCCCAAAGCGGCAGAGCTGTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CAA 90 bp CGAGGGCAGGGGTGTCATGCCCTCCTACTGGACACCCCCACCCATTaGCCCATCCCAGTGAGCCTCCACTCCTTGGCTCCTTATCCCACC +
Preference number: 6 (lower is better)
Translates to: RGQGCHALLLDTPTH*PIPVSLHSLAPYPT
Trigger: GGTGGGATAAGGAGCCAAGGAGTGGAGGCTCACTGGGATGGGCAAATGGGTGGGGGTGTCCAGTAGGAGGGCATGACACCCCTGCCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536918.1
CDS GCA 72 bp CCGCGGATGGTGAACTTGTGGGACACCTTGGTCCAGTaGTCACGGTTGGAGGCCACGCGCTCGTACAGCTCT +
Preference number: 6 (lower is better)
Translates to: PRMVNLWDTLVQ*SRLEATRSYSS
Trigger: AGAGCTGTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS GCA 72 bp TGCGCTGATAGTCCTGAGGCGAGGGCAGGGGTGTCATaGCCTCCTACTGGACACCCCCACCCATTTGCCCAT +
Preference number: 6 (lower is better)
Translates to: CADSPEARAGVS*PPTGHPHPFAH
Trigger: ATGGGCAAATGGGTGGGGGTGTCCAGTAGGAGGGCATGACACCCCTGCCCTCGCCTCAGGACTATCAGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536918.1
CDS CCA 72 bp ACATGCCCTGGGCATGGTTGGTCCAAGAGCAGCCCTTaGGATCATCCAGTCCAGCCTCTAGCCCCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: TCPGHGWSKSSP*DHPVQPLAPGQ
Trigger: CTGCCCAGGGGCTAGAGGCTGGACTGGATGATCCCAAGGGCTGCTCTTGGACCAACCATGCCCAGGGCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420501.5
CDS CCA 72 bp CCTCGCAGTTTCCGCAGGTTACGTACGTCCCAGGCATaGAACCCGACTCCCTTATGCTCCGGGACGCTGGAG +
Preference number: 6 (lower is better)
Translates to: PRSFRRLRTSQA*NPTPLCSGTLE
Trigger: CTCCAGCGTCCCGGAGCATAAGGGAGTCGGGTTCCATGCCTGGGACGTACGTAACCTGCGGAAACTGCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441209.6
CDS CCA 72 bp GATCTTGTTCACCAGCTCGGCCACACCGATGACCTCTaGGGAAGGGAGAGGGGCAAGGAACCACCGGTGGAG +
Preference number: 6 (lower is better)
Translates to: DLVHQLGHTDDL*GRERGKEPPVE
Trigger: CTCCACCGGTGGTTCCTTGCCCCTCTCCCTTCCCCAGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441209.6
CDS CCA 72 bp ACTGCCTCTGCTGCTCGGCTGGCTCTGGGAGGAGGTTaGAGCAGGTCTGATAATGCAGAAGGGGGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: TASAARLALGGG*SRSDNAEGGGR
Trigger: CCTCCCTCCCCCTTCTGCATTATCAGACCTGCTCCAACCTCCTCCCAGAGCCAGCCGAGCAGCAGAGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540380.5
CDS CAA 72 bp CACATGCCCTGGGCATGGTTGGTCCAAGAGCAGCCCTaGGGATCATCCAGTCCAGCCTCTAGCCCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: HMPWAWLVQEQP*GSSSPASSPWA
Trigger: TGCCCAGGGGCTAGAGGCTGGACTGGATGATCCCAAGGGCTGCTCTTGGACCAACCATGCCCAGGGCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420501.5
CDS CAA 90 bp AGGAAGTCCAGCGAGTTGTTACTTGGGAGGCCGCGGATGGTGAACTaGTGGGACACCTTGGTCCAGTGCTCACGGTTGGAGGCCACGCGC +
Preference number: 6 (lower is better)
Translates to: RKSSELLLGRPRMVN*WDTLVQCSRLEATR
Trigger: GCGCGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTGGACTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS GCA 72 bp AGGCCTTCTCCCGGTCCATCATCTCCATCGGCCTGTTaGCCATGGCCTTCTCCAGGTCTCCCTGGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: RPSPGPSSPSAC*PWPSPGLPGRR
Trigger: TCTTCTCCCAGGGAGACCTGGAGAAGGCCATGGGCAACAGGCCGATGGAGATGATGGACCGGGAGAAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000536918.1
ENST00000540345.5
ENST00000544570.5
CDS GCA 72 bp GTGCTCACGGTTGGAGGCCACGCGCTCGTACAGCTCTaGCGCTTTGGGGAACAGGTCCTGCAACAGCTTGTA +
Preference number: 6 (lower is better)
Translates to: VLTVGGHALVQL*RFGEQVLQQLV
Trigger: TACAAGCTGTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGTACGAGCGCGTGGCCTCCAACCGTGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS GCA 72 bp GCAGCCCCCAGTAGAGGCAACCGTGGATGGGAGGCATaGAAGGCCAACTCCCTTAGGGTGGGAGACAGGAAA +
Preference number: 6 (lower is better)
Translates to: AAPSRGNRGWEA*KANSLRVGDRK
Trigger: TTTCCTGTCTCCCACCCTAAGGGAGTTGGCCTTGCATGCCTCCCATCCACGGTTGCCTCTACTGGGGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS CCA 72 bp GGTTGGAGGCCACGCGCTCGTACAGCTCTGCCGCTTTaGGGAACAGGTCCTGCAACAGCTTGTAGATGGGCA +
Preference number: 6 (lower is better)
Translates to: GWRPRARTALPL*GTGPATACRWA
Trigger: TGCCCATCTACAAGCTGTTGCAGGACCTGTTCCCCAAAGCGGCAGAGCTGTACGAGCGCGTGGCCTCCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CCA 72 bp GGCTTGAGGAAGACCTGCTGGCCCCGCCTGAGGAATTaGACAACAGCGATGAGGATGTGGTGCAGCACCAGG +
Preference number: 6 (lower is better)
Translates to: GLRKTCWPRLRN*TTAMRMWCSTR
Trigger: CCTGGTGCTGCACCACATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000536308.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
ENST00000544570.5
CDS CCA 72 bp CATCCAGTCCAGCCTCTAGCCCCTGGGCAGGCCCTATaGCTTCCTGATGGCAGACTACAAGCCCCTCCATCT +
Preference number: 6 (lower is better)
Translates to: HPVQPLAPGQAL*LPDGRLQAPPS
Trigger: AGATGGAGGGGCTTGTAGTCTGCCATCAGGAAGCCATAGGGCCTGCCCAGGGGCTAGAGGCTGGACTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420501.5
CDS CAA 72 bp GTGAACTTGTGGGACACCTTGGTCCAGTGCTCACGGTaGGAGGCCACGCGCTCGTACAGCTCTGCCGCTTTG +
Preference number: 6 (lower is better)
Translates to: VNLWDTLVQCSR*EATRSYSSAAL
Trigger: CAAAGCGGCAGAGCTGTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CAA 72 bp GGAGGGGATCACTCAGCATCAAGGCTGCAGCAGCCATaGATGGGGGCCCTAGTGCCATCCAGATCAGGCACC +
Preference number: 6 (lower is better)
Translates to: GGDHSASRLQQP*MGALVPSRSGT
Trigger: GGTGCCTGATCTGGATGGCACTAGGGCCCCCATCAATGGCTGCTGCAGCCTTGATGCTGAGTGATCCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CAA 72 bp CGGCTTGAGGAAGACCTGCTGGCCCCGCCTGAGGAATaGGACAACAGCGATGAGGATGTGGTGCAGCACCAG +
Preference number: 6 (lower is better)
Translates to: RLEEDLLAPPEE*DNSDEDVVQHQ
Trigger: CTGGTGCTGCACCACATCCTCATCGCTGTTGTCCAATTCCTCAGGCGGGGCCAGCAGGTCTTCCTCAAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000376450.7
ENST00000444035.6
ENST00000536308.5
ENST00000539367.5
ENST00000541998.5
ENST00000543575.5
ENST00000543750.5
ENST00000544570.5
CDS CAA 90 bp GAGTTGTTACTTGGGAGGCCGCGGATGGTGAACTTGTGGGACACCTaGGTCCAGTGCTCACGGTTGGAGGCCACGCGCTCGTACAGCTCT +
Preference number: 6 (lower is better)
Translates to: ELLLGRPRMVNLWDT*VQCSRLEATRSYSS
Trigger: AGAGCTGTACGAGCGCGTGGCCTCCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCCCAAGTAACAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CAA 90 bp AGTGTCCCTGGAGGGGATCACTCAGCATCAAGGCTGCAGCAGCCATaGATGGGGGCCCTAGTGCCATCCAGATCAGGCACCTCGTACTCC +
Preference number: 6 (lower is better)
Translates to: SVPGGDHSASRLQQP*MGALVPSRSGTSYS
Trigger: GGAGTACGAGGTGCCTGATCTGGATGGCACTAGGGCCCCCATCAATGGCTGCTGCAGCCTTGATGCTGAGTGATCCCCTCCAGGGACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CCA 72 bp GAGTTGTTACTTGGGAGGCCGCGGATGGTGAACTTGTaGGACACCTTGGTCCAGTGCTCACGGTTGGAGGCC +
Preference number: 6 (lower is better)
Translates to: ELLLGRPRMVNL*DTLVQCSRLEA
Trigger: GGCCTCCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCCCAAGTAACAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CCA 72 bp GTGGATGGGAGGCATGCAAGGCCAACTCCCTTAGGGTaGGAGACAGGAAAGGCAGAATGCCTGCCCCCTGAA +
Preference number: 6 (lower is better)
Translates to: VDGRHARPTPLG*ETGKAECLPPE
Trigger: TTCAGGGGGCAGGCATTCTGCCTTTCCTGTCTCCCACCCTAAGGGAGTTGGCCTTGCATGCCTCCCATCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537631.5
CDS CAA 90 bp GTCGCCAGGTCCTCGTCGAACTTGCTGAACCATGGCCCATTGATCTaGTTCACCAGCTCGGCCACACCGATGACCTCTGGGGAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: VARSSSNLLNHGPLI*FTSSATPMTSGEGR
Trigger: TCTCCCTTCCCCAGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCTGGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441209.6
CDS CAA 90 bp AAGGCCGTCGCCAGGTCCTCGTCGAACTTGCTGAACCATGGCCCATaGATCTTGTTCACCAGCTCGGCCACACCGATGACCTCTGGGGAA +
Preference number: 6 (lower is better)
Translates to: KAVARSSSNLLNHGP*ILFTSSATPMTSGE
Trigger: TTCCCCAGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTCGACGAGGACCTGGCGACGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441209.6
CDS TCA 72 bp AGTCCAGCGAGTTGTTACTTGGGAGGCCGCGGATGGTaGACTTGTGGGACACCTTGGTCCAGTGCTCACGGT +
Preference number: 6 (lower is better)
Translates to: SPASCYLGGRGW*TCGTPWSSAHG
Trigger: ACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CCA 72 bp GCCATCTTCTGGAGGTCCTTGAAGATGCGGAGATGGTaGGCCAGGTCTGTGGCCAAGATGATGTCCCGCATC +
Preference number: 6 (lower is better)
Translates to: AIFWRSLKMRRW*ARSVAKMMSRI
Trigger: GATGCGGGACATCATCTTGGCCACAGACCTGGCCCACCATCTCCGCATCTTCAAGGACCTCCAGAAGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000420501.5
ENST00000441209.6
ENST00000444035.6
ENST00000536918.1
ENST00000540345.5
ENST00000544239.1
ENST00000544570.5
CDS CCA 72 bp TCAGCCATCTTCTGGAGGTCCTTGAAGATGCGGAGATaGTGGGCCAGGTCTGTGGCCAAGATGATGTCCCGC +
Preference number: 6 (lower is better)
Translates to: SAIFWRSLKMRR*WARSVAKMMSR
Trigger: GCGGGACATCATCTTGGCCACAGACCTGGCCCACCATCTCCGCATCTTCAAGGACCTCCAGAAGATGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000420501.5
ENST00000441209.6
ENST00000444035.6
ENST00000536918.1
ENST00000540345.5
ENST00000544239.1
ENST00000544570.5
CDS CCA 72 bp GATGCAAACCCTGAGGTCACATGCCCTGGGCATGGTTaGTCCAAGAGCAGCCCTTGGGATCATCCAGTCCAG +
Preference number: 6 (lower is better)
Translates to: DANPEVTCPGHG*SKSSPWDHPVQ
Trigger: CTGGACTGGATGATCCCAAGGGCTGCTCTTGGACCAACCATGCCCAGGGCATGTGACCTCAGGGTTTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420501.5
CDS CCA 72 bp TCTGAGAAGCCCAGCCCATTGCAGCCCAGCCGCTTCTaGGAGATGATAGCCTCCCATCCAGTAGGTAGGTGT +
Preference number: 6 (lower is better)
Translates to: SEKPSPLQPSRF*EMIASHPVGRC
Trigger: ACACCTACCTACTGGATGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543750.5
CDS CAA 72 bp AGCGAGTTGTTACTTGGGAGGCCGCGGATGGTGAACTaGTGGGACACCTTGGTCCAGTGCTCACGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: SELLLGRPRMVN*WDTLVQCSRLE
Trigger: CTCCAACCGTGAGCACTGGACCAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCCCAAGTAACAACTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CAA 72 bp GGCACCTCGTACTCCTCATCCAGGAAGTCCAGCGAGTaGTTACTTGGGAGGCCGCGGATGGTGAACTTGTGG +
Preference number: 6 (lower is better)
Translates to: GTSYSSSRKSSE*LLGRPRMVNLW
Trigger: CCACAAGTTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTGGACTTCCTGGATGAGGAGTACGAGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CAA 90 bp TCCAGATCAGGCACCTCGTACTCCTCATCCAGGAAGTCCAGCGAGTaGTTACTTGGGAGGCCGCGGATGGTGAACTTGTGGGACACCTTG +
Preference number: 6 (lower is better)
Translates to: SRSGTSYSSSRKSSE*LLGRPRMVNLWDTL
Trigger: CAAGGTGTCCCACAAGTTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTGGACTTCCTGGATGAGGAGTACGAGGTGCCTGATCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS CCA 72 bp TCTGAGAAGCCCAGCCCATTGCAGCCCAGCCGCTTCTaGGAGATGATAGCCTCCCTGAGTTTGCACCAAATG +
Preference number: 6 (lower is better)
Translates to: SEKPSPLQPSRF*EMIASLSLHQM
Trigger: CATTTGGTGCAAACTCAGGGAGGCTATCATCTCCCAGAAGCGGCTGGGCTGCAATGGGCTGGGCTTCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485058.7
CDS CAA 72 bp TCCTCGTCGAACTTGCTGAACCATGGCCCATTGATCTaGTTCACCAGCTCGGCCACACCGATGACCTCTGGG +
Preference number: 6 (lower is better)
Translates to: SSSNLLNHGPLI*FTSSATPMTSG
Trigger: CCCAGAGGTCATCGGTGTGGCCGAGCTGGTGAACAAGATCAATGGGCCATGGTTCAGCAAGTTCGACGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441209.6
CDS CCA 72 bp GTACTCCTCATCCAGGAAGTCCAGCGAGTTGTTACTTaGGAGGCCGCGGATGGTGAACTTGTGGGACACCTT +
Preference number: 6 (lower is better)
Translates to: VLLIQEVQRVVT*EAADGELVGHL
Trigger: AAGGTGTCCCACAAGTTCACCATCCGCGGCCTCCCAAGTAACAACTCGCTGGACTTCCTGGATGAGGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000540345.5
ENST00000544570.5
CDS GCA 72 bp AGTGCTCAGGAAGCTGTAAACTTCTTTGTGAGCACCTaGCGCATGCCAGGGGCTAAGCTCTGCACTTCCAGA +
Preference number: 6 (lower is better)
Translates to: SAQEAVNFFVST*RMPGAKLCTSR
Trigger: TCTGGAAGTGCAGAGCTTAGCCCCTGGCATGCGGCAGGTGCTCACAAAGAAGTTTACAGCTTCCTGAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540345.5
CDS GCA 72 bp AGGTGTGAAACTGAGGCCCAGAGACGTTTAGTGACTTaGTCAAGGTCACACAGCTCAAAAGCAGCAAAGCCG +
Preference number: 6 (lower is better)
Translates to: RCETEAQRRLVT*SRSHSSKAAKP
Trigger: CGGCTTTGCTGCTTTTGAGCTGTGTGACCTTGAGCAAGTCACTAAACGTCTCTGGGCCTCAGTTTCACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490749.1
CDS CAA 90 bp CAACAGCTTGTAGATGGGCATTGCAATGTGCTCCATGAAGCTGATTaGCAGCTCAGGGATATAGGCCTTCTCCCGGTCCATCATCTCCAT +
Preference number: 6 (lower is better)
Translates to: QQLVDGHCNVLHEAD*QLRDIGLLPVHHLH
Trigger: ATGGAGATGATGGACCGGGAGAAGGCCTATATCCCTGAGCTGCAAATCAGCTTCATGGAGCACATTGCAATGCCCATCTACAAGCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334456.10
ENST00000376450.7
ENST00000418754.6
ENST00000444035.6
ENST00000536918.1
ENST00000540345.5
ENST00000544570.5
CDS CAA 90 bp AGAACTCTTGAAACCAAGCCCACACAAAATGTTAGAAAAACAGGGTaGGGAGGGATGCAAACCCTGAGGTCACATGCCCTGGGCATGGTT +
Preference number: 6 (lower is better)
Translates to: RTLETKPTQNVRKTG*GGMQTLRSHALGMV
Trigger: AACCATGCCCAGGGCATGTGACCTCAGGGTTTGCATCCCTCCCAACCCTGTTTTTCTAACATTTTGTGTGGGCTTGGTTTCAAGAGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420501.5