Pregenerated sensors for PDCD4 (Homo sapiens)
Ensembl gene IDs: ENSG00000150593Ensembl transcript IDs: ENST00000280154.12, ENST00000393104.6, ENST00000444997.1, ENST00000462577.5, ENST00000467574.5, ENST00000481353.5, ENST00000483670.5, ENST00000492932.5
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCAGGCATGAGCCACCGTaGCCAGCCCTTAAATCTCAT | + |
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Preference number: 2 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRRHEPP*PALKSH Trigger: ATGAGATTTAAGGGCTGGGCACGGTGGCTCATGCCT...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCCAGCAGCAGCCAACATaGGGTTTTAGCAGCTTAACT | + |
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Preference number: 2 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRQQQPT*GFSSLT Trigger: AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTG...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCACGTTGAGGCCTTGCTaGGTTATTAGGCTATGTAAA | + |
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Preference number: 2 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRTLRPC*VIRLCK Trigger: TTTACATAGCCTAATAACTCAGCAAGGCCTCAACGT...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| 3UTR-3UTR TCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCTGTTCCCTGGAAAGATaGATAAGTCTCATGACTAAT | + |
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Preference number: 2 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRCSLER*ISLMTN Trigger: ATTAGTCATGAGACTTATTCATCTTTCCAGGGAACA...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| 3UTR-3UTR CAA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCGGTAAATGTCAAGCTTaGGGTCTCTGGAGTATAACT | + |
|
Preference number: 3 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRGKCQA*GLWSIT Trigger: AGTTATACTCCAGAGACCCAAAGCTTGACATTTACC...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| 3UTR-3UTR CAA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCAATGTCAGAAATGCCTaGTACCCAAAACAAGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRNVRNA*YPKQVL Trigger: AAGCACTTGTTTTGGGTACAAGGCATTTCTGACATT...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCGGCCGGGTGGTCGGCTaGCCAATCGTGGCGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRGRVVG*PIVAAE Trigger: CTCCGCCGCCACGATTGGCCAGCCGACCACCCGGCC...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCTTGGCCGAGGCCGGGTaGTCGGCTGGCCAATCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRLAEAG*SAGQSW Trigger: CCACGATTGGCCAGCCGACCACCCGGCCTCGGCCAA...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTGAGGGCGGCGCTTATTaGCCGAGGCCGGGTGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTEGGAY*PRPGGR Trigger: CCGACCACCCGGCCTCGGCCAATAAGCGCCGCCCTC...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393104.6 |
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| CDS-3UTR TCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCCACTCCCACTGTCGCTaGCCGAATCGCCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRHSHCR*PNRLCQ Trigger: CTGGCAGAGGCGATTCGGTCAGCGACAGTGGGAGTG...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR TCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCACTCCCAACCTCAAGTaGTCCGCCCACCTCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRTPNLK*SAHLGL Trigger: GAGGCCGAGGTGGGCGGATCACTTGAGGTTGGGAGT...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCGCTCGCCCAGGTTCCTaGTCAGCCGGCCCCGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLARPGS*SAGPDP Trigger: GGGGTCGGGGCCGGCTGACCAGGAACCTGGGCGAGC...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR GCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTCCGCTCTTCTGTCTCTaGCGCCGCCTCGGAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTPLFCL*RRLGES Trigger: AGACTCTCCGAGGCGGCGGCAGAGACAGAAGAGCGG...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR GCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCACCATCTCGACTCACTaGAACCTCTGCCTCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRTISTH*NLCLPG Trigger: ACCTGGGAGGCAGAGGTTGCAGTGAGTCGAGATGGT...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCCTGGCCCACCAACTGTaGTGCTCTAGGAGTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRLAHQL*CSRSIQ Trigger: CTGGATACTCCTAGAGCACCACAGTTGGTGGGCCAG...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR TCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCACTCCCAACCTCAAGTaGTCCGCCCACCTCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLTPNLK*SAHLGL Trigger: GAGGCCGAGGTGGGCGGATCACTTGAGGTTGGGAGT...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTGCCTCGGAGAGTCTCTaGCCCTTCTCGCTCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTASESL*PFSLCL Trigger: CAAACAGAGCGAGAAGGGCCAGAGACTCTCCGAGGC...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393104.6 |
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| CDS-3UTR GCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTACCATCTCGACTCACTaGAACCTCTGCCTCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTTISTH*NLCLPG Trigger: ACCTGGGAGGCAGAGGTTGCAGTGAGTCGAGATGGT...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCGCTCTAGCAATAAACTaGCCCACCAACTGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRALAIN*PTNCGA Trigger: AGCACCACAGTTGGTGGGCCAGTTTATTGCTAGAGC...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTAGCCTCCCAAGTAGCTaGGATTACACGCATGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTSLPSS*DYTHAP Trigger: TGGCGCATGCGTGTAATCCCAGCTACTTGGGAGGCT...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR TCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCGATGTCATCTCTCTATaGCTAGCCTTCCCCTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRDVISL*LAFPSN Trigger: ATTGGAGGGGAAGGCTAGTCATAGAGAGATGACATC...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR GCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCAGAGCAGCTCTAGCCTaGACACAATCTACAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRRAALA*TQSTVP Trigger: AGGAACTGTAGATTGTGTGCAGGCTAGAGCTGCTCT...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR GCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTAGGCATGAGCCACCGTaGCCAGCCCTTAAATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTRHEPP*PALKSH Trigger: ATGAGATTTAAGGGCTGGGCACGGTGGCTCATGCCT...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCACCTTCCCTTTGGACTaGTTGGCACAGTTAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRTFPLD*LAQLIH Trigger: GTGGATTAACTGTGCCAACCAGTCCAAAGGGAAGGT...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR TCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTACGCTTTCTGCCCCTTaGAGGACAAAGATCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTTLSAP*RTKISE Trigger: CTCAGAGATCTTTGTCCTTCAAGGGGCAGAAAGCGT...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR GCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCGCCCACCAACTGTGGTaGTCTAGGAGTATCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLAHQLW*SRSIQC Trigger: GCACTGGATACTCCTAGAGCACCACAGTTGGTGGGC...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCCTGGCCCACCAACTGTaGTGCTCTAGGAGTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLLAHQL*CSRSIQ Trigger: CTGGATACTCCTAGAGCACCACAGTTGGTGGGCCAG...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR TCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTCTCCAGCACAGAGTATaGATGTGGGACATCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTLQHRV*MWDIQI Trigger: AATCTGGATGTCCCACATTCATACTCTGTGCTGGAG...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR GCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCTACCCCAGACACCTTTaGCTCCTGCACCACCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLYPRHL*LLHHLS Trigger: AGAAAGGTGGTGCAGGAGGCAAAGGTGTCTGGGGTA...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTCAGCAGCAGCCAACATaGGGTTTTAGCAGCTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTQQQPT*GFSSLT Trigger: AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTG...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR TCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCACGCTTTCTGCCCCTTaGAGGACAAAGATCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLTLSAP*RTKISE Trigger: CTCAGAGATCTTTGTCCTTCAAGGGGCAGAAAGCGT...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR GCA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCTTTCCACATCAGTTGTaGTCATTACTGTCCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRFPHQL*SLLSHK Trigger: TTTGTGGGACAGTAATGAGCACAACTGATGTGGAAA...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCTTCCTTTCCCAGATCTaGATCGCCTATCCAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLFLSQI*IAYPAT Trigger: GGTTGCTGGATAGGCGATCCAGATCTGGGAAAGGAA...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCGCTCTAGCAATAAACTaGCCCACCAACTGTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLALAIN*PTNCGA Trigger: AGCACCACAGTTGGTGGGCCAGTTTATTGCTAGAGC...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR TCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTATCTCTTTAACAAGGTaGTTGACAGATTGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTISLTR*LTDCCP Trigger: TGGGCAGCAATCTGTCAATCACCTTGTTAAAGAGAT...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR TCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCCTCCAGCACAGAGTATaGATGTGGGACATCCAGATT | + |
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Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLLQHRV*MWDIQI Trigger: AATCTGGATGTCCCACATTCATACTCTGTGCTGGAG...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR TCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTACGTTGAGGCCTTGCTaGGTTATTAGGCTATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTTLRPC*VIRLCK Trigger: TTTACATAGCCTAATAACTCAGCAAGGCCTCAACGT...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR GCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCAGAGCAGCTCTAGCCTaGACACAATCTACAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLRAALA*TQSTVP Trigger: AGGAACTGTAGATTGTGTGCAGGCTAGAGCTGCTCT...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCACCTTCCCTTTGGACTaGTTGGCACAGTTAATCCAC | + |
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Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLTFPLD*LAQLIH Trigger: GTGGATTAACTGTGCCAACCAGTCCAAAGGGAAGGT...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTGGATACTGCCAACACTaGTACTCCACTTTTCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTGYCQH*YSTFHF Trigger: GAAATGAAAAGTGGAGTACCAGTGTTGGCAGTATCC...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCCAGCAGCAGCCAACATaGGGTTTTAGCAGCTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLQQQPT*GFSSLT Trigger: AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTG...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR GCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTTTTCCACATCAGTTGTaGTCATTACTGTCCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTFPHQL*SLLSHK Trigger: TTTGTGGGACAGTAATGAGCACAACTGATGTGGAAA...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR GCA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTTTACAAAACGCTTTCTaGCCCTTGAAGGACAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTLQNAF*PLKDKD Trigger: ATCTTTGTCCTTCAAGGGGCAGAAAGCGTTTTGTAA...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCTATTCAGTAGCTCTCTaGTTTAAGACGACCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLYSVAL*FKTTSI Trigger: GATGGAGGTCGTCTTAAACCAGAGAGCTACTGAATA...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR GCA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCTTACAAAACGCTTTCTaGCCCTTGAAGGACAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLLQNAF*PLKDKD Trigger: ATCTTTGTCCTTCAAGGGGCAGAAAGCGTTTTGTAA...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS CCA 90 bp | GTTTTCTTCTACCCAGTAACACGGGGGCGAGAGGGCGGCGCTTATTaGCCGAGGCCGGGTGGTCGGCTGGCCAATCGTGGCGGCGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: VFFYPVTRGREGGAY*PRPGGRLANRGGGA Trigger: GGCTCCGCCGCCACGATTGGCCAGCCGACCACCCGGCCTCGGCCAATAAGCGCCGCCCTCTCGCCCCCGTGTTACTGGGTAGAAGAAAAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393104.6 |
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| CDS GCA 90 bp | GCCCAGGTTCCTGGTCAGCCGGCCCCGACCCCGCTCTTCTGTCTCTaGCGCCGCCTCGGAGAGTCTCTGGCCCTTCTCGCTCTGTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: AQVPGQPAPTPLFCL*RRLGESLALLALFV Trigger: AACAAACAGAGCGAGAAGGGCCAGAGACTCTCCGAGGCGGCGGCAGAGACAGAAGAGCGGGGTCGGGGCCGGCTGACCAGGAACCTGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000393104.6 ENST00000467574.5 |
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| CDS-3UTR CAA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTAGAGGGCGGCGCTTATaGGCCGAGGCCGGGTGGTCG | + |
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Preference number: 5 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTRGRRL*AEAGWS Trigger: CGACCACCCGGCCTCGGCCAATAAGCGCCGCCCTCT...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393104.6 |
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| CDS-3UTR CAA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCTTCCCTTTGGACTGGTaGGCACAGTTAATCCACTTC | + |
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Preference number: 5 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRFPLDW*AQLIHF Trigger: GAAGTGGATTAACTGTGCCAACCAGTCCAAAGGGAA...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CAA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCAAGGTGATTGACAGATaGCTGCCCACCTCCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLKVIDR*LPTSRA Trigger: GGCTCTGGAGGTGGGCAGCAATCTGTCAATCACCTT...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS TCA 90 bp | ACTGTCCCACAAAGGTCAGAAAGAAGCTTAGATGTCATCTCTCTATaGCTAGCCTTCCCCTCCAATGCTAAGGATACTGCCAACACTGGT | + |
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Preference number: 5 (lower is better) Translates to: TVPQRSERSLDVISL*LAFPSNAKDTANTG Trigger: ACCAGTGTTGGCAGTATCCTTAGCATTGGAGGGGAAGGCTAGTCATAGAGAGATGACATCTAAGCTTCTTTCTGACCTTTGTGGGACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000280154.12 ENST00000393104.6 ENST00000444997.1 ENST00000462577.5 ENST00000481353.5 ENST00000492932.5 |
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| CDS-3UTR CAA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTTTCCCTTTGGACTGGTaGGCACAGTTAATCCACTTC | + |
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Preference number: 5 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTFPLDW*AQLIHF Trigger: GAAGTGGATTAACTGTGCCAACCAGTCCAAAGGGAA...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CAA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCCCAGCAACCTTCCCTTaGGACTGGTTGGCACAGTTA | + |
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Preference number: 5 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLPATFP*DWLAQL Trigger: TAACTGTGCCAACCAGTCCAAAGGGAAGGTTGCTGG...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CAA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTAGAGTTTCACTCTTGTaGCCCAAACGAGAGCAATGG | + |
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Preference number: 5 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTRVSLL*PKREQW Trigger: CCATTGCTCTCGTTTGGGCAACAAGAGTGAAACTCT...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CAA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTACAAGAGTTTCACTCTaGTTGCCCAAACGAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTTRVSL*LPKREQ Trigger: TTGCTCTCGTTTGGGCAACAAGAGTGAAACTCTTGT...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CAA 90 bp | GGTTTCTTCATGTTGGTCAAGCTGGTCATGAACTCCCAACCTCAAGTGATCCGCACAAAGATCTCTGAGTaGTTTGGAAATTATTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GFFMLVKLVMNSQPQVIRTKISE*FGNYSS Trigger: GCTGGAATAATTTCCAAACAACTCAGAGATCTTTGT...GCGGATCACTTGAGGTTGGGAGTTCATGACCAGCTTGACCAACATGAAGAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CAA 90 bp | CAAAGCACAGTATCTCAACAGCAGCAGCCAACATGGGGTTTTAGCAGCTTAACTGGTAAATGTCAAGCTTaGGGTCTCTGGAGTATAACT | + |
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Preference number: 5 (lower is better) Translates to: QSTVSQQQQPTWGFSSLTGKCQA*GLWSIT Trigger: AGTTATACTCCAGAGACCCAAAGCTTGACATTTACC...AGTTAAGCTGCTAAAACCCCATGTTGGCTGCTGCTGTTGAGATACTGTGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CAA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCAGAGTTTCACTCTTGTaGCCCAAACGAGAGCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLRVSLL*PKREQW Trigger: CCATTGCTCTCGTTTGGGCAACAAGAGTGAAACTCT...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CAA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCAGTCGCCTTTTTGCCTaGGCATTAATTCTAGCTTCG | + |
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Preference number: 5 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLSRLFA*ALILAS Trigger: CGAAGCTAGAATTAATGCCAAGGCAAAAAGGCGACT...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CAA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCGGTAAATGTCAAGCTTaGGGTCTCTGGAGTATAACT | + |
|
Preference number: 5 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLGKCQA*GLWSIT Trigger: AGTTATACTCCAGAGACCCAAAGCTTGACATTTACC...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS-3UTR CAA 90 bp | ATTAGAATATTCCACTTAAGAAGAGGTTACTTTTCTGTCCCTCCTTGCCCCCTCAATGTCAGAAATGCCTaGTACCCAAAACAAGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: IRIFHLRRGYFSVPPCPLNVRNA*YPKQVL Trigger: AAGCACTTGTTTTGGGTACAAGGCATTTCTGACATT...GAGGGGGCAAGGAGGGACAGAAAAGTAACCTCTTCTTAAGTGGAATATTCTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000280154.12 ENST00000393104.6 |
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| CDS CCA 72 bp | GGGGCGAGAGGGCGGCGCTTATTGGCCGAGGCCGGGTaGTCGGCTGGCCAATCGTGGCGGCGGAGCCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GARGRRLLAEAG*SAGQSWRRSRS Trigger: GCTCCGGCTCCGCCGCCACGATTGGCCAGCCGACCACCCGGCCTCGGCCAATAAGCGCCGCCCTCTCGCCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393104.6 |
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| CDS CCA 72 bp | AGGGCGGCGCTTATTGGCCGAGGCCGGGTGGTCGGCTaGCCAATCGTGGCGGCGGAGCCGGAGCTGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RAALIGRGRVVG*PIVAAEPELRR Trigger: CCTCCTCAGCTCCGGCTCCGCCGCCACGATTGGCCAGCCGACCACCCGGCCTCGGCCAATAAGCGCCGCCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393104.6 |
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| CDS GCA 72 bp | CCTGGTCAGCCGGCCCCGACCCCGCTCTTCTGTCTCTaGCGCCGCCTCGGAGAGTCTCTGGCCCTTCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: PGQPAPTPLFCL*RRLGESLALLA Trigger: AGCGAGAAGGGCCAGAGACTCTCCGAGGCGGCGGCAGAGACAGAAGAGCGGGGTCGGGGCCGGCTGACCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000393104.6 ENST00000467574.5 |
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| CDS CCA 72 bp | TACCCAGTAACACGGGGGCGAGAGGGCGGCGCTTATTaGCCGAGGCCGGGTGGTCGGCTGGCCAATCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: YPVTRGREGGAY*PRPGGRLANRG Trigger: GCCACGATTGGCCAGCCGACCACCCGGCCTCGGCCAATAAGCGCCGCCCTCTCGCCCCCGTGTTACTGGGTA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393104.6 |
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| CDS CAA 72 bp | CTACCCAGTAACACGGGGGCGAGAGGGCGGCGCTTATaGGCCGAGGCCGGGTGGTCGGCTGGCCAATCGTGG | + |
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Preference number: 6 (lower is better) Translates to: LPSNTGARGRRL*AEAGWSAGQSW Trigger: CCACGATTGGCCAGCCGACCACCCGGCCTCGGCCAATAAGCGCCGCCCTCTCGCCCCCGTGTTACTGGGTAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393104.6 |
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| CDS CAA 90 bp | TGTTTTCTTCTACCCAGTAACACGGGGGCGAGAGGGCGGCGCTTATaGGCCGAGGCCGGGTGGTCGGCTGGCCAATCGTGGCGGCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: CFLLPSNTGARGRRL*AEAGWSAGQSWRRS Trigger: GCTCCGCCGCCACGATTGGCCAGCCGACCACCCGGCCTCGGCCAATAAGCGCCGCCCTCTCGCCCCCGTGTTACTGGGTAGAAGAAAACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393104.6 |
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| CDS GCA 72 bp | CATCATACACCTGTCCAGGTGTACCCCAGACACCTTTaGCTCCTGCACCACCTTTCTTTGGTAGTCCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: HHTPVQVYPRHL*LLHHLSLVVPF Trigger: GAAGGGGACTACCAAAGAAAGGTGGTGCAGGAGGCAAAGGTGTCTGGGGTACACCTGGACAGGTGTATGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000280154.12 ENST00000393104.6 ENST00000444997.1 ENST00000467574.5 ENST00000483670.5 ENST00000492932.5 |
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| CDS CAA 90 bp | CTGCCAGAGTCCCGGGATGAGTTTTTCCTTAGTCGCCTTTTTGCCTaGGCATTAATTCTAGCTTCGTTAATGGAGGATGCTGAAATCCAA | + |
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Preference number: 6 (lower is better) Translates to: LPESRDEFFLSRLFA*ALILASLMEDAEIQ Trigger: TTGGATTTCAGCATCCTCCATTAACGAAGCTAGAATTAATGCCAAGGCAAAAAGGCGACTAAGGAAAAACTCATCCCGGGACTCTGGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENST00000280154.12 ENST00000393104.6 ENST00000444997.1 ENST00000467574.5 ENST00000483670.5 ENST00000492932.5 |
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| CDS TCA 72 bp | CAAAGGTCAGAAAGAAGCTTAGATGTCATCTCTCTATaGCTAGCCTTCCCCTCCAATGCTAAGGATACTGCC | + |
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Preference number: 6 (lower is better) Translates to: QRSERSLDVISL*LAFPSNAKDTA Trigger: GGCAGTATCCTTAGCATTGGAGGGGAAGGCTAGTCATAGAGAGATGACATCTAAGCTTCTTTCTGACCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000280154.12 ENST00000393104.6 ENST00000444997.1 ENST00000462577.5 ENST00000481353.5 ENST00000492932.5 |
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| CDS CAA 72 bp | TCCCGGGATGAGTTTTTCCTTAGTCGCCTTTTTGCCTaGGCATTAATTCTAGCTTCGTTAATGGAGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: SRDEFFLSRLFA*ALILASLMEDA Trigger: AGCATCCTCCATTAACGAAGCTAGAATTAATGCCAAGGCAAAAAGGCGACTAAGGAAAAACTCATCCCGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENST00000280154.12 ENST00000393104.6 ENST00000444997.1 ENST00000467574.5 ENST00000483670.5 ENST00000492932.5 |
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| CDS GCA 72 bp | TCTCTTAACATTTCCGCAACTTCATTAGTATCTCCATaGTCAAAATATTCCTGTATGATTGGTGTTAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: SLNISATSLVSP*SKYSCMIGVKV Trigger: GACTTTAACACCAATCATACAGGAATATTTTGAGCATGGAGATACTAATGAAGTTGCGGAAATGTTAAGAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000280154.12 ENST00000393104.6 ENST00000444997.1 ENST00000462577.5 ENST00000467574.5 ENST00000481353.5 ENST00000492932.5 |
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