RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDCD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000188389, ENSG00000276977

Ensembl transcript IDs: ENST00000334409.10, ENST00000343705.3, ENST00000418831.1, ENST00000618185.3, ENST00000630230.1, ENST00000630560.1

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCCAGGCAGCTCAGCCCCTGGACGGCCTGCAATGGCCTGCACCCTaGCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGG +
Preference number: 1 (lower is better)
Translates to: PQAAQPLDGLQWPAP*LLLLRKCADPGSWW
Trigger: CCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR TCA 90 bp GGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTaGCTGCATCTGGCCCTCCCTGTAGGGGACGGTGACACCTGCTGC +
Preference number: 1 (lower is better)
Translates to: GSWTQAALCWQDLKQ*LHLALPVGDGDTCC
Trigger: GCAGCAGGTGTCACCGTCCCCTACAGGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR TCA 90 bp AGCCCCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTaGGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAA +
Preference number: 1 (lower is better)
Translates to: SPWTACNGLHPACFS*GNALTRAHGGGSAE
Trigger: TTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR TCA 90 bp TGCCTGCCCGCTTACTGCCTCAGCTTCCCTGCCCCACAAAGGGCCTaGGGTGCTGCCTGGGCATGTGTAAAGGTGGAGGGGTTTCCTGCC +
Preference number: 1 (lower is better)
Translates to: CLPAYCLSFPAPQRA*GAAWACVKVEGFPA
Trigger: GGCAGGAAACCCCTCCACCTTTACACATGCCCAGGCAGCACCTCAGGCCCTTTGTGGGGCAGGGAAGCTGAGGCAGTAAGCGGGCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR GCA 90 bp GACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATaGGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTG +
Preference number: 1 (lower is better)
Translates to: DGLQWPAPCLLLLRK*ADPGSWWRVCRTLV
Trigger: CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR CCA 90 bp CCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTaGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGCCGGTCAGAGG +
Preference number: 1 (lower is better)
Translates to: PCLLLLRKCADPGSW*RVCRTLVAKEAGQR
Trigger: CCTCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR CCA 90 bp GCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATaGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGCCGGTCAG +
Preference number: 1 (lower is better)
Translates to: APCLLLLRKCADPGS*WRVCRTLVAKEAGQ
Trigger: CTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR TCA 90 bp CCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTaGCCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAA +
Preference number: 1 (lower is better)
Translates to: PAMACTLPASPEEMR*PGLMVEGLQNTGGQ
Trigger: TTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR GCA 90 bp GAAAGGCCTCCAGCTCTGCCTGCCCGCTTACTGCCTCAGCTTCCCTaGCCCACAAAGGGCCTGAGGTGCTGCCTGGGCATGTGTAAAGGT +
Preference number: 1 (lower is better)
Translates to: ERPPALPARLLPQLP*PTKGLRCCLGMCKG
Trigger: ACCTTTACACATGCCCAGGCAGCACCTCAGGCCCTTTGTGGGGCAGGGAAGCTGAGGCAGTAAGCGGGCAGGCAGAGCTGGAGGCCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR GCA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTaGAGAACACTGGTGGCCAAGGAAGCCGGTCAGAGGGGCCAAGAG +
Preference number: 1 (lower is better)
Translates to: LLLRKCADPGSWWRV*RTLVAKEAGQRGQE
Trigger: CTCTTGGCCCCTCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR CCA 90 bp AATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTaGCCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCT +
Preference number: 1 (lower is better)
Translates to: NALTRAHGGGSAEHW*PRKPVRGAKSSVHP
Trigger: AGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR CCA 90 bp GGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTaGTGGCCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCAT +
Preference number: 1 (lower is better)
Translates to: GNALTRAHGGGSAEH*WPRKPVRGAKSSVH
Trigger: ATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp CCCGGTCGCCCCCAGGCAGCTCAGCCCCTGGACGGCCTGCAATGGCCTGCACCCTCCTCCTTCAGGGGCTaGCCGGTGCGCCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: PGRPQAAQPLDGLQWPAPSSFRG*PVRLAP
Trigger: AGGAGCCAGGCGCACCGGCCAGCCCCTGAAGGAGGA...GGGTGCAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCTGGGGGCGACCGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR GCA 90 bp GCACTCCGAGGGCCGTCAGCTGAGCCCCTGCGGGCGGGGGATGAGGTGCCCATTAGCCCCTGGACGGCCTaGAATGGCCTGCACCCTGCC +
Preference number: 2 (lower is better)
Translates to: ALRGPSAEPLRAGDEVPISPWTA*NGLHPA
Trigger: GGCAGGGTGCAGGCCATTGCAGGCCGTCCAGGGGCT...AATGGGCACCTCATCCCCCGCCCGCAGGGGCTCAGCTGACGGCCCTCGGAGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR TCA 90 bp GCACTCCGAGGGCCGTCAGCTGAGCCCCTGCGGGCGGGGGATGAGGTGCCCATTGAACACAGGCACGGCTaGGGGGTCCTCCTTCAGGGG +
Preference number: 2 (lower is better)
Translates to: ALRGPSAEPLRAGDEVPIEHRHG*GVLLQG
Trigger: CCCCTGAAGGAGGACCCCTCAGCCGTGCCTGTGTTC...AATGGGCACCTCATCCCCCGCCCGCAGGGGCTCAGCTGACGGCCCTCGGAGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCGGTGCAGGTGCAGGCTaGAGCCCCGGTCGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: PGRPAMACTLPASPEEMRGAGAG*SPGRPQ
Trigger: CTGGGGGCGACCGGGGCTCCAGCCTGCACCTGCACC...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR TCA 90 bp CCCGGTCGCCCCCAGGCAGCTCAGCCCCTGGACGGCCTGCAATGGCCTGCACCCGCTCACTGTGGGCATTaGGACATGAGTCCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: PGRPQAAQPLDGLQWPAPAHCGH*DMSPVV
Trigger: CACCACAGGACTCATGTCTCAATGCCCACAGTGAGC...GGGTGCAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCTGGGGGCGACCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR TCA 90 bp GGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGCCGGTCAGAGGGGCCAAGAGCCCTGCGGGCGGGGGATaGGGTGCCCATTCCGCTAGG +
Preference number: 2 (lower is better)
Translates to: GGSAEHWWPRKPVRGAKSPAGGG*GAHSAR
Trigger: CCTAGCGGAATGGGCACCTCATCCCCCGCCCGCAGG...GCTCTTGGCCCCTCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR GCA 90 bp AGCCCCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGGGGGACGGTGACACCTaGTGCCTGGGCTCACTGTGG +
Preference number: 2 (lower is better)
Translates to: SPMYLPLLCPVLGPASRAGDGDT*CLGSLW
Trigger: CCACAGTGAGCCCAGGCAGCAGGTGTCACCGTCCCC...CGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR CCA 90 bp AAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCGGTGCAGGTGCAGGCTaGAGCCCCGGTCGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: KEAGQRGQEQCPSSGLSGGAGAG*SPGRPQ
Trigger: CTGGGGGCGACCGGGGCTCCAGCCTGCACCTGCACC...GCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCGGTGCAGGTGCAGGCTaGAGCCCCGGTCGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCGAGAG*SPGRPQ
Trigger: CTGGGGGCGACCGGGGCTCCAGCCTGCACCTGCACC...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CCA 90 bp AAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCACTGGCCGGCTGGCCTaGGTGAGGGGCTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: KEAGQRGQEQCPSSGLSGTGRLA*VRGWGG
Trigger: CCCACCCCAGCCCCTCACCCAGGCCAGCCGGCCAGT...GCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR TCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCCCCTGTAGGGGACGGTaGCACCTGCTGCCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPPCRGR*HLLPGL
Trigger: GAGCCCAGGCAGCAGGTGTCACCGTCCCCTACAGGG...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp CAGCAGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTGTGCCTGGTGCAGGTaGAGGCTGGAGCCCCGGTCG +
Preference number: 2 (lower is better)
Translates to: QQQQQQQQQRFRELDAGSCAWCR*RLEPRS
Trigger: CGACCGGGGCTCCAGCCTGCACCTGCACCAGGCACA...GCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CCA 90 bp ACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGGGGCTGGTGCAGGTGCAGGCTaGAGCCCCGGTCGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: TCCLGSLWALRHESCGGAGAGAG*SPGRPQ
Trigger: CTGGGGGCGACCGGGGCTCCAGCCTGCACCTGCACC...AGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CCA 90 bp TGCGTCCAGGGCGTTTCGGGATGCCACTGCCAGGGGCACCTTGGCTGCTCCAAGTGGTGGGGCTGTGCCTaGTGCAGGTGCAGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: CVQGVSGCHCQGHLGCSKWWGCA*CRCRLE
Trigger: CTCCAGCCTGCACCTGCACCAGGCACAGCCCCACCA...CTTGGAGCAGCCAAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTGGACGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR CCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGACTGGCCGGCTGGCCTaGGTGAGGGGCTGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQTGRLA*VRGWGG
Trigger: CCCACCCCAGCCCCTCACCCAGGCCAGCCGGCCAGT...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR TCA 90 bp GCACTCCGAGGGCCGTCAGCTGAGCCCCTGCGGGCGGGGGATGAGGTGCCCATTGCTCACTGTGGGCATTaGGACATGAGTCCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: ALRGPSAEPLRAGDEVPIAHCGH*DMSPVV
Trigger: CACCACAGGACTCATGTCTCAATGCCCACAGTGAGC...AATGGGCACCTCATCCCCCGCCCGCAGGGGCTCAGCTGACGGCCCTCGGAGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR TCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCCCCTGTAGGGGACGGTaGCACCTGCTGCCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCPCRGR*HLLPGL
Trigger: GAGCCCAGGCAGCAGGTGTCACCGTCCCCTACAGGG...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR TCA 90 bp CCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGCCGGTCAGAACACAGGCACGGCTaGGGGGTCCTCCTTCAGGGG +
Preference number: 2 (lower is better)
Translates to: PGLMVEGLQNTGGQGSRSEHRHG*GVLLQG
Trigger: CCCCTGAAGGAGGACCCCTCAGCCGTGCCTGTGTTC...TGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR GCA 90 bp AGGGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCATGTGCCTGGTGCAGGTaGAGGCTGGAGCCCCGGTCG +
Preference number: 2 (lower is better)
Translates to: RGTLAAPRPSPTSPQVQACAWCR*RLEPRS
Trigger: CGACCGGGGCTCCAGCCTGCACCTGCACCAGGCACA...TGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR GCA 90 bp CCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGTGTGCCTGGTGCAGGTaGAGGCTGGAGCCCCGGTCG +
Preference number: 2 (lower is better)
Translates to: PRKPVRGAKSSVHPQASVCAWCR*RLEPRS
Trigger: CGACCGGGGCTCCAGCCTGCACCTGCACCAGGCACA...CACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGTGGTGGGGCTGTGCCTaGTGCAGGTGCAGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLWWGCA*CRCRLE
Trigger: CTCCAGCCTGCACCTGCACCAGGCACAGCCCCACCA...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR CCA 90 bp CCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGGTGAGGGGCTGGGGTaGGCTGTGGGCACTTCTGCC +
Preference number: 2 (lower is better)
Translates to: PRKPVRGAKSSVHPQASVGEGLG*AVGTSA
Trigger: GGCAGAAGTGCCCACAGCCCACCCCAGCCCCTCACC...CACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCGGTGAGGGGCTGGGGTaGGCTGTGGGCACTTCTGCC +
Preference number: 2 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCGEGLG*AVGTSA
Trigger: GGCAGAAGTGCCCACAGCCCACCCCAGCCCCTCACC...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp AAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCTCCTCCTTCAGGGGCTaGCCGGTGCGCCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: KEAGQRGQEQCPSSGLSGSSFRG*PVRLAP
Trigger: AGGAGCCAGGCGCACCGGCCAGCCCCTGAAGGAGGA...GCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR TCA 90 bp CAGCAGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCCCTGAGGAAATGCGCTaGCCCGGGCTCATGGTGGAG +
Preference number: 2 (lower is better)
Translates to: QQQQQQQQQRFRELDAGSPEEMR*PGLMVE
Trigger: CTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGG...GCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR TCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCCCTGAGGAAATGCGCTaGCCCGGGCTCATGGTGGAG +
Preference number: 2 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGPEEMR*PGLMVE
Trigger: CTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGG...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR TCA 90 bp GGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCTGCCTGAGGAAATGCGCTaGCCCGGGCTCATGGTGGAG +
Preference number: 2 (lower is better)
Translates to: GSRSEGPRAVSILRPQWLPEEMR*PGLMVE
Trigger: CTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGG...CAGCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR TCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCCCTGCCTGCTTCTCCTaGGGAAATGCGCTGACCCGG +
Preference number: 2 (lower is better)
Translates to: PGRPAMACTLPASPEEMRPACFS*GNALTR
Trigger: CCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGG...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR TCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGCCCTGTAGGGGACGGTaGCACCTGCTGCCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQPCRGR*HLLPGL
Trigger: GAGCCCAGGCAGCAGGTGTCACCGTCCCCTACAGGG...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR TCA 90 bp CAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGGCCCCACAAAGGGCCTaGGGTGCTGCCTGGGCATGT +
Preference number: 2 (lower is better)
Translates to: QQQQQQQRFRELDAGSSVAPQRA*GAAWAC
Trigger: ACATGCCCAGGCAGCACCTCAGGCCCTTTGTGGGGC...CACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR GCA 90 bp CAGCAGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCCGGCCTGCAATGGCCTaGACCCTGCCTGCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: QQQQQQQQQRFRELDAGSRPAMA*TLPASP
Trigger: AGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCG...GCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCCGGCCTGCAATGGCCTaGACCCTGCCTGCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGRPAMA*TLPASP
Trigger: AGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCG...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp ACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGGGGCTAGCCCCTGGACGGCCTaGAATGGCCTGCACCCTGCC +
Preference number: 2 (lower is better)
Translates to: TCCLGSLWALRHESCGGASPWTA*NGLHPA
Trigger: GGCAGGGTGCAGGCCATTGCAGGCCGTCCAGGGGCT...AGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp CAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAAGCCCCTGGACGGCCTaGAATGGCCTGCACCCTGCC +
Preference number: 2 (lower is better)
Translates to: QRFRELDAGSSVLAGPEASPWTA*NGLHPA
Trigger: GGCAGGGTGCAGGCCATTGCAGGCCGTCCAGGGGCT...TGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGCCTGTGGTGGGGCTGTaGCTGGTGCAGGTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALPVVGL*LVQVQA
Trigger: AGCCTGCACCTGCACCAGGCACAGCCCCACCACAGG...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTCCTGTGGTGGGGCTGTaGCTGGTGCAGGTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCPVVGL*LVQVQA
Trigger: AGCCTGCACCTGCACCAGGCACAGCCCCACCACAGG...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCGACGGTGACACCTGCTaGCTGGGCTCACTGTGGGCA +
Preference number: 2 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPDGDTC*LGSLWA
Trigger: TGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp AAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCTCAGGGGCTGGCCGGTaGGCCTGGCTCCTATTGTCC +
Preference number: 2 (lower is better)
Translates to: KEAGQRGQEQCPSSGLSGSGAGR*AWLLLS
Trigger: GGACAATAGGAGCCAGGCGCACCGGCCAGCCCCTGA...GCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp CCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCCTGGACGGCCTGCAATaGCCTGCACCCTGCCTGCTT +
Preference number: 2 (lower is better)
Translates to: PCLLLLRKCADPGSWWRVLDGLQ*PAPCLL
Trigger: AAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAG...GACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCCTGGACGGCCTGCAATaGCCTGCACCCTGCCTGCTT +
Preference number: 2 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGLDGLQ*PAPCLL
Trigger: AAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAG...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CCA 90 bp CCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGAGGCAGCTCAGCCCCTaGACGGCCTGCAATGGCCTG +
Preference number: 2 (lower is better)
Translates to: PRKPVRGAKSSVHPQASVRQLSP*TACNGL
Trigger: CAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCT...CACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp CAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGTGGTGGGGCTGTGCCTaGTGCAGGTGCAGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: QQQQQQQRFRELDAGSSVWWGCA*CRCRLE
Trigger: CTCCAGCCTGCACCTGCACCAGGCACAGCCCCACCA...CACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CCA 90 bp CAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGGCTGGCCGGTGCGCCTaGCTCCTATTGTCCCTCGTG +
Preference number: 2 (lower is better)
Translates to: QQQQQQQRFRELDAGSSVAGRCA*LLLSLV
Trigger: CACGAGGGACAATAGGAGCCAGGCGCACCGGCCAGC...CACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR TCA 90 bp AGGGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCACCTGAGGAAATGCGCTaGCCCGGGCTCATGGTGGAG +
Preference number: 2 (lower is better)
Translates to: RGTLAAPRPSPTSPQVQAPEEMR*PGLMVE
Trigger: CTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGG...TGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR TCA 90 bp TGCGTCCAGGGCGTTTCGGGATGCCACTGCCAGGGGCACCTTGGCTGCTCCAAGTGTGCTGGCAGGACCTaGAGCAGTGACTGCATCTGG +
Preference number: 2 (lower is better)
Translates to: CVQGVSGCHCQGHLGCSKCAGRT*SSDCIW
Trigger: CCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACA...CTTGGAGCAGCCAAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTGGACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR GCA 90 bp AATCCAGCTCCCCATAGTCCACAGAGAACACAGGCACGGCTGAGGGGTCCTCCTTGTGCCTGGTGCAGGTaGAGGCTGGAGCCCCGGTCG +
Preference number: 2 (lower is better)
Translates to: NPAPHSPQRTQARLRGPPCAWCR*RLEPRS
Trigger: CGACCGGGGCTCCAGCCTGCACCTGCACCAGGCACA...AGGAGGACCCCTCAGCCGTGCCTGTGTTCTCTGTGGACTATGGGGAGCTGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR GCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGGGGGACGGTGACACCTaGTGCCTGGGCTCACTGTGG +
Preference number: 2 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQGDGDT*CLGSLW
Trigger: CCACAGTGAGCCCAGGCAGCAGGTGTCACCGTCCCC...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp CCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTTTCACGCAGGCAGCTCTGTaGTGGCAGGACCTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: PCTSHSCAQSWALRPGRFTQAAL*WQDLKQ
Trigger: CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGT...GAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR GCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCACGCAGGCAGCTCTGTaGTGGCAGGACCTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPTQAAL*WQDLKQ
Trigger: CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGT...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCACGCAGGCAGCTCTGTaGTGGCAGGACCTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGTQAAL*WQDLKQ
Trigger: CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGT...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGCAGGGCGTTTCGGGATaGCACTGCCAGGGGCACCTT +
Preference number: 2 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALQGVSG*HCQGHL
Trigger: AAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTG...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR GCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCTCCTATTGTCCCTCGTaGGGCCCGGGAGCAGATGAC +
Preference number: 2 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPSYCPS*GPGADD
Trigger: GTCATCTGCTCCCGGGCCGCACGAGGGACAATAGGA...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR GCA 90 bp GGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCTGGTGGCATACTCCGTCTaGTCAGGGACACAGGGCACG +
Preference number: 2 (lower is better)
Translates to: GSRSEGPRAVSILRPQWLVAYSV*SGTQGT
Trigger: CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCAC...CAGCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCGCTGACCCGGGCTCATaGTGGAGGGTCTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPADPGS*WRVCRT
Trigger: TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGC...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CCA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTCTGGACGGCCTGCAATaGCCTGCACCCTGCCTGCTT +
Preference number: 2 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCLDGLQ*PAPCLL
Trigger: AAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAG...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CCA 90 bp CAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAAGGCAGCTCAGCCCCTaGACGGCCTGCAATGGCCTG +
Preference number: 2 (lower is better)
Translates to: QRFRELDAGSSVLAGPEARQLSP*TACNGL
Trigger: CAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCT...TGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CCA 90 bp ACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGGGGCTAGGCAGCTCAGCCCCTaGACGGCCTGCAATGGCCTG +
Preference number: 2 (lower is better)
Translates to: TCCLGSLWALRHESCGGARQLSP*TACNGL
Trigger: CAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCT...AGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTCAGGCCTCAGTGGCTaGGCACTCCGAGGGCCGTCA +
Preference number: 2 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQSGLSG*ALRGPS
Trigger: TGACGGCCCTCGGAGTGCCCAGCCACTGAGGCCTGA...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCGGGTCTGCAGAACACTaGTGGCCAAGGAAGCCGGTC +
Preference number: 2 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGGSAEH*WPRKPV
Trigger: GACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCC...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR TCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCGTGGGCATTGAGACATaGGTCCTGTGGTGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: PGRPAMACTLPASPEEMRVGIET*VLWWGC
Trigger: ACAGCCCCACCACAGGACTCATGTCTCAATGCCCAC...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp CAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCACGGCCTGCAATGGCCTaGACCCTGCCTGCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: QRFRELDAGSSVLAGPEARPAMA*TLPASP
Trigger: AGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCG...TGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp CTAGGAAAGACAATGGTGGCATACTCCGTCTGCTCAGGGACACAGGGCACGGGGCCTGTGGTGGGGCTGTaGCTGGTGCAGGTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: LGKTMVAYSVCSGTQGTGPVVGL*LVQVQA
Trigger: AGCCTGCACCTGCACCAGGCACAGCCCCACCACAGG...CCCCGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCACCATTGTCTTTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR GCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGGACGGTGACACCTGCTaGCTGGGCTCACTGTGGGCA +
Preference number: 2 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQDGDTC*LGSLWA
Trigger: TGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp CCGCTAGGAAAGACAATGGTGGCATACTCCGTCTGCTCAGGGACACAGGGCACGGGGGACGGTGACACCTaGTGCCTGGGCTCACTGTGG +
Preference number: 2 (lower is better)
Translates to: PLGKTMVAYSVCSGTQGTGDGDT*CLGSLW
Trigger: CCACAGTGAGCCCAGGCAGCAGGTGTCACCGTCCCC...CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCACCATTGTCTTTCCTAGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp TGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGACCCGGGCTCATGGTaGAGGGTCTGCAGAACACTG +
Preference number: 2 (lower is better)
Translates to: CADPGSWWRVCRTLVAKEDPGSW*RVCRTL
Trigger: CAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTC...TTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCGACCCGGGCTCATGGTaGAGGGTCTGCAGAACACTG +
Preference number: 2 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCDPGSW*RVCRTL
Trigger: CAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTC...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CCA 90 bp AAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCGACCCGGGCTCATGGTaGAGGGTCTGCAGAACACTG +
Preference number: 2 (lower is better)
Translates to: KEAGQRGQEQCPSSGLSGDPGSW*RVCRTL
Trigger: CAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTC...GCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp TGCGTCCAGGGCGTTTCGGGATGCCACTGCCAGGGGCACCTTGGCTGCTCCAAGTGCCTGGGCTCACTGTaGGCATTGAGACATGAGTCC +
Preference number: 2 (lower is better)
Translates to: CVQGVSGCHCQGHLGCSKCLGSL*ALRHES
Trigger: GGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCA...CTTGGAGCAGCCAAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTGGACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR CCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGAGAGATTCAGGGAGCTaGACGCAGGCAGCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLRDSGS*TQAALC
Trigger: GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR CCA 90 bp CCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGCCGGTCAAGAGATTCAGGGAGCTaGACGCAGGCAGCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: PGLMVEGLQNTGGQGSRSRDSGS*TQAALC
Trigger: GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT...TGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp CCGCTAGGAAAGACAATGGTGGCATACTCCGTCTGCTCAGGGACACAGGGCACGGCTGGCCGGTGCGCCTaGCTCCTATTGTCCCTCGTG +
Preference number: 2 (lower is better)
Translates to: PLGKTMVAYSVCSGTQGTAGRCA*LLLSLV
Trigger: CACGAGGGACAATAGGAGCCAGGCGCACCGGCCAGC...CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCACCATTGTCTTTCCTAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR TCA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGTGGGCATTGAGACATaGGTCCTGTGGTGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCVGIET*VLWWGC
Trigger: ACAGCCCCACCACAGGACTCATGTCTCAATGCCCAC...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR TCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCGCTCACTGTGGGCATTaGGACATGAGTCCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPAHCGH*DMSPVV
Trigger: CACCACAGGACTCATGTCTCAATGCCCACAGTGAGC...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR TCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGTGCTGGCAGGACCTaGAGCAGTGACTGCATCTGG +
Preference number: 2 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALCAGRT*SSDCIW
Trigger: CCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACA...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR TCA 90 bp AAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCTGTGCTGGCAGGACCTaGAGCAGTGACTGCATCTGG +
Preference number: 2 (lower is better)
Translates to: KEAGQRGQEQCPSSGLSGCAGRT*SSDCIW
Trigger: CCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACA...GCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR GCA 90 bp CCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTTTCTCATGGTGGAGGGTCTaGAGAACACTGGTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: PCTSHSCAQSWALRPGRFSWWRV*RTLVAK
Trigger: CTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGA...GAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR GCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCTCATGGTGGAGGGTCTaGAGAACACTGGTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPSWWRV*RTLVAK
Trigger: CTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGA...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp CCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTCATGGTGGAGGGTCTaGAGAACACTGGTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: PCLLLLRKCADPGSWWRVSWWRV*RTLVAK
Trigger: CTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGA...GACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp CCGCTAGGAAAGACAATGGTGGCATACTCCGTCTGCTCAGGGACACAGGGCACGCGGCCTGCAATGGCCTaGACCCTGCCTGCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: PLGKTMVAYSVCSGTQGTRPAMA*TLPASP
Trigger: AGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCG...CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCACCATTGTCTTTCCTAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTGCCTGGGCTCACTGTaGGCATTGAGACATGAGTCC +
Preference number: 2 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGCLGSL*ALRHES
Trigger: GGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCA...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp CAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCACTTCTCCTGAGGAAATaGGCTGACCCGGGCTCATGG +
Preference number: 2 (lower is better)
Translates to: QRFRELDAGSSVLAGPEALLLRK*ADPGSW
Trigger: CCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG...TGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTAAGGGCCTGAGGTGCTaGCTGGGCATGTGTAAAGGT +
Preference number: 2 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCKGLRC*LGMCKG
Trigger: ACCTTTACACATGCCCAGGCAGCACCTCAGGCCCTT...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR GCA 90 bp CCGCTAGGAAAGACAATGGTGGCATACTCCGTCTGCTCAGGGACACAGGGCACGTCCTATTGTCCCTCGTaGGGCCCGGGAGCAGATGAC +
Preference number: 2 (lower is better)
Translates to: PLGKTMVAYSVCSGTQGTSYCPS*GPGADD
Trigger: GTCATCTGCTCCCGGGCCGCACGAGGGACAATAGGA...CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCACCATTGTCTTTCCTAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp CCGCTAGGAAAGACAATGGTGGCATACTCCGTCTGCTCAGGGACACAGGGCACGGCTGACCCGGGCTCATaGTGGAGGGTCTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: PLGKTMVAYSVCSGTQGTADPGS*WRVCRT
Trigger: TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGC...CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCACCATTGTCTTTCCTAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp AGGGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCATGCCTGGGCTCACTGTaGGCATTGAGACATGAGTCC +
Preference number: 2 (lower is better)
Translates to: RGTLAAPRPSPTSPQVQACLGSL*ALRHES
Trigger: GGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCA...TGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR CCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGAGAGATTCAGGGAGCTaGACGCAGGCAGCTCTGTGC +
Preference number: 2 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQRDSGS*TQAALC
Trigger: GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR TCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGTGGGCATTGAGACATaGGTCCTGTGGTGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: DGDTCCLGSLWALRHESCVGIET*VLWWGC
Trigger: ACAGCCCCACCACAGGACTCATGTCTCAATGCCCAC...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR GCA 90 bp GAACACTGGTGGCCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTTCATGGTGGAGGGTCTaGAGAACACTGGTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: EHWWPRKPVRGAKSSVHPSWWRV*RTLVAK
Trigger: CTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGA...AGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGGCCACCAGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR TCA 90 bp CGGGGTCTTCTCTCGCCACTGGAAATCCAGCTCCCCATAGTCCACAGAGAACACGTGGGCATTGAGACATaGGTCCTGTGGTGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: RGLLSPLEIQLPIVHREHVGIET*VLWWGC
Trigger: ACAGCCCCACCACAGGACTCATGTCTCAATGCCCAC...GTGTTCTCTGTGGACTATGGGGAGCTGGATTTCCAGTGGCGAGAGAAGACCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CCA 90 bp CTAGGAAAGACAATGGTGGCATACTCCGTCTGCTCAGGGACACAGGGCACGGGGTGCCTGGGCTCACTGTaGGCATTGAGACATGAGTCC +
Preference number: 2 (lower is better)
Translates to: LGKTMVAYSVCSGTQGTGCLGSL*ALRHES
Trigger: GGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCA...CCCCGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCACCATTGTCTTTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CAA 90 bp GGCCTCAGTGGCTGGGCACTCCGAGGGCCGTCAGCTGAGCCCCTGCGGGCGGGGTGCGCCTGGCTCCTATaGTCCCTCGTGCGGCCCGGG +
Preference number: 3 (lower is better)
Translates to: GLSGWALRGPSAEPLRAGCAWLL*SLVRPG
Trigger: CCCGGGCCGCACGAGGGACAATAGGAGCCAGGCGCA...CCCCGCCCGCAGGGGCTCAGCTGACGGCCCTCGGAGTGCCCAGCCACTGAGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR GCA 72 bp GCACGGCTGAGGGGTCCTCCTTCAGGGGCTGGCCGGTaGGCCTGGCTCCTATTGTCCCTCGTGCGGCCCGGG +
Preference number: 3 (lower is better)
Translates to: ARLRGPPSGAGR*AWLLLSLVRPG
Trigger: CCCGGGCCGCACGAGGGACAATAGGAGCCAGGCGCACCGGCCAGCCCCTGAAGGAGGACCCCTCAGCCGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CAA 90 bp CCCGGTCGCCCCCAGGCAGCTCAGCCCCTGGACGGCCTGCAATGGCCTGCACCCGGCTCACTGTGGGCATaGAGACATGAGTCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: PGRPQAAQPLDGLQWPAPGSLWA*RHESCG
Trigger: ACCACAGGACTCATGTCTCAATGCCCACAGTGAGCC...GGGTGCAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCTGGGGGCGACCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CAA 90 bp CCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGCCGGTCATGCGCCTGGCTCCTATaGTCCCTCGTGCGGCCCGGG +
Preference number: 3 (lower is better)
Translates to: PGLMVEGLQNTGGQGSRSCAWLL*SLVRPG
Trigger: CCCGGGCCGCACGAGGGACAATAGGAGCCAGGCGCA...TGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CAA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTCTCCTGTGCCCAGTCTaGGGCCCTGCGTCCAGGGCG +
Preference number: 3 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCLLCPV*GPASRA
Trigger: CGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAG...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR GCA 72 bp CATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTaGGTCCAGGGCGTTTCGGGATGCCACTGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: HVPPTPVPSLGP*VQGVSGCHCQG
Trigger: CCCCTGGCAGTGGCATCCCGAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR TCA 72 bp ACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTaGGGAAATGCGCTGACCCGGGCTCATGGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: TACNGLHPACFS*GNALTRAHGGG
Trigger: CCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR CCA 72 bp CTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTaGTGGCCAAGGAAGCCGGTCAGAGGGGCCAAGAGC +
Preference number: 3 (lower is better)
Translates to: LTRAHGGGSAEH*WPRKPVRGAKS
Trigger: GCTCTTGGCCCCTCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR TCA 72 bp GCAGTGACTGCATCTGGCCCTCCCTGTAGGGGACGGTaGCACCTGCTGCCTGGGCTCACTGTGGGCATTGAG +
Preference number: 3 (lower is better)
Translates to: AVTASGPPCRGR*HLLPGLTVGIE
Trigger: CTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTCCCCTACAGGGAGGGCCAGATGCAGTCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR CCA 72 bp ACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTaGCCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGT +
Preference number: 3 (lower is better)
Translates to: TRAHGGGSAEHW*PRKPVRGAKSS
Trigger: ACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR TCA 72 bp GCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTaGCCCGGGCTCATGGTGGAGGGTCTGCAGAACACT +
Preference number: 3 (lower is better)
Translates to: ACTLPASPEEMR*PGLMVEGLQNT
Trigger: AGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR GCA 72 bp CAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATaGGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGA +
Preference number: 3 (lower is better)
Translates to: QWPAPCLLLLRK*ADPGSWWRVCR
Trigger: TCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR GCA 72 bp CCTCAGCTTCCCTGCCCCACAAAGGGCCTGAGGTGCTaGCTGGGCATGTGTAAAGGTGGAGGGGTTTCCTGC +
Preference number: 3 (lower is better)
Translates to: PQLPCPTKGLRC*LGMCKGGGVSC
Trigger: GCAGGAAACCCCTCCACCTTTACACATGCCCAGGCAGCACCTCAGGCCCTTTGTGGGGCAGGGAAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR GCA 72 bp CTGCCTCAGCTTCCCTGCCCCACAAAGGGCCTGAGGTaGTGCCTGGGCATGTGTAAAGGTGGAGGGGTTTCC +
Preference number: 3 (lower is better)
Translates to: LPQLPCPTKGLR*CLGMCKGGGVS
Trigger: GGAAACCCCTCCACCTTTACACATGCCCAGGCAGCACCTCAGGCCCTTTGTGGGGCAGGGAAGCTGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
3UTR-3UTR CAA 90 bp CCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGCCGGTCAGGCTCACTGTGGGCATaGAGACATGAGTCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: PGLMVEGLQNTGGQGSRSGSLWA*RHESCG
Trigger: ACCACAGGACTCATGTCTCAATGCCCACAGTGAGCC...TGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
3UTR-3UTR CAA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCGGCTCACTGTGGGCATaGAGACATGAGTCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: PGRPAMACTLPASPEEMRGSLWA*RHESCG
Trigger: ACCACAGGACTCATGTCTCAATGCCCACAGTGAGCC...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR CCA 72 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTaGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGCC +
Preference number: 3 (lower is better)
Translates to: LLLRKCADPGSW*RVCRTLVAKEA
Trigger: GGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR CCA 72 bp CTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATaGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAA +
Preference number: 3 (lower is better)
Translates to: LLLLRKCADPGS*WRVCRTLVAKE
Trigger: TTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
3UTR-3UTR CAA 90 bp CAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGGCTCACTGTGGGCATaGAGACATGAGTCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: QRFRELDAGSSVLAGPEAGSLWA*RHESCG
Trigger: ACCACAGGACTCATGTCTCAATGCCCACAGTGAGCC...TGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp AGTGGCTGGGCACTCCGAGGGCCGTCAGCTGAGCCCCTGCGGGCGGGGGATGAGACTGGCCGGCTGGCCTaGGTGAGGGGCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SGWALRGPSAEPLRAGDETGRLA*VRGWGG
Trigger: CCCACCCCAGCCCCTCACCCAGGCCAGCCGGCCAGT...CTCATCCCCCGCCCGCAGGGGCTCAGCTGACGGCCCTCGGAGTGCCCAGCCACT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR TCA 90 bp CCCGGTCGCCCCCAGGCAGCTCAGCCCCTGGACGGCCTGCAATGGCCTGCACCCCCCTGTAGGGGACGGTaGCACCTGCTGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PGRPQAAQPLDGLQWPAPPCRGR*HLLPGL
Trigger: GAGCCCAGGCAGCAGGTGTCACCGTCCCCTACAGGG...GGGTGCAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCTGGGGGCGACCGGG
73% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CCCGGTCGCCCCCAGGCAGCTCAGCCCCTGGACGGCCTGCAATGGCCTGCACCCCTCTCCCGAGTGGTGTaGGGGGCTGGGGTGGAATGC +
Preference number: 4 (lower is better)
Translates to: PGRPQAAQPLDGLQWPAPLSRVV*GAGVEC
Trigger: GCATTCCACCCCAGCCCCTCACACCACTCGGGAGAG...GGGTGCAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCTGGGGGCGACCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp CCCGGTCGCCCCCAGGCAGCTCAGCCCCTGGACGGCCTGCAATGGCCTGCACCCCCAGCCCTGCCCTCCTaGCCTTGGGACCGTAGGATG +
Preference number: 4 (lower is better)
Translates to: PGRPQAAQPLDGLQWPAPPALPS*PWDRRM
Trigger: CATCCTACGGTCCCAAGGTCAGGAGGGCAGGGCTGG...GGGTGCAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCTGGGGGCGACCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp GCGCCTGGCTCCTATTGTCCCTCGTGCGGCCCGGGAGCAGATGACGGCCAGGACGGTGCAGGTGCAGGCTaGAGCCCCGGTCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: APGSYCPSCGPGADDGQDGAGAG*SPGRPQ
Trigger: CTGGGGGCGACCGGGGCTCCAGCCTGCACCTGCACC...GTCCTGGCCGTCATCTGCTCCCGGGCCGCACGAGGGACAATAGGAGCCAGGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp AGTGGCTGGGCACTCCGAGGGCCGTCAGCTGAGCCCCTGCGGGCGGGGGATGAGAGGCAGCTCAGCCCCTaGACGGCCTGCAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: SGWALRGPSAEPLRAGDERQLSP*TACNGL
Trigger: CAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCT...CTCATCCCCCGCCCGCAGGGGCTCAGCTGACGGCCCTCGGAGTGCCCAGCCACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR TCA 90 bp GGCCTCAGTGGCTGGGCACTCCGAGGGCCGTCAGCTGAGCCCCTGCGGGCGGGGTGTGCTGGCAGGACCTaGAGCAGTGACTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: GLSGWALRGPSAEPLRAGCAGRT*SSDCIW
Trigger: CCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACA...CCCCGCCCGCAGGGGCTCAGCTGACGGCCCTCGGAGTGCCCAGCCACTGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR GCA 90 bp GCGCCTGGCTCCTATTGTCCCTCGTGCGGCCCGGGAGCAGATGACGGCCAGGACAGCCCCTGGACGGCCTaGAATGGCCTGCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: APGSYCPSCGPGADDGQDSPWTA*NGLHPA
Trigger: GGCAGGGTGCAGGCCATTGCAGGCCGTCCAGGGGCT...GTCCTGGCCGTCATCTGCTCCCGGGCCGCACGAGGGACAATAGGAGCCAGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp AGTGGCTGGGCACTCCGAGGGCCGTCAGCTGAGCCCCTGCGGGCGGGGGATGAGGGCTGGGGTGGGCTGTaGGCACTTCTGCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SGWALRGPSAEPLRAGDEGWGGL*ALLPFS
Trigger: AGAGAAGGGCAGAAGTGCCCACAGCCCACCCCAGCC...CTCATCCCCCGCCCGCAGGGGCTCAGCTGACGGCCCTCGGAGTGCCCAGCCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp GCGCCTGGCTCCTATTGTCCCTCGTGCGGCCCGGGAGCAGATGACGGCCAGGACTCCTCCTTCAGGGGCTaGCCGGTGCGCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: APGSYCPSCGPGADDGQDSSFRG*PVRLAP
Trigger: AGGAGCCAGGCGCACCGGCCAGCCCCTGAAGGAGGA...GTCCTGGCCGTCATCTGCTCCCGGGCCGCACGAGGGACAATAGGAGCCAGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp AGCCCCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTGCCTGCTGGCCGCCTaGATGCTGGTGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SPMYLPLLCPVLGPASRACLLAA*MLVALP
Trigger: GGGCAGGGCCACCAGCATCCAGGCGGCCAGCAGGCA...CGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGTGGCTGGGCACTCCGAGGGCCGTCAGCTGAGCCCCTGCGGGCGGGGGATGAGGTGGCATACTCCGTCTaGTCAGGGACACAGGGCACG +
Preference number: 4 (lower is better)
Translates to: SGWALRGPSAEPLRAGDEVAYSV*SGTQGT
Trigger: CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCAC...CTCATCCCCCGCCCGCAGGGGCTCAGCTGACGGCCCTCGGAGTGCCCAGCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR GCA 90 bp CCCGGTCGCCCCCAGGCAGCTCAGCCCCTGGACGGCCTGCAATGGCCTGCACCCCTTCTCCTGAGGAAATaGGCTGACCCGGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PGRPQAAQPLDGLQWPAPLLLRK*ADPGSW
Trigger: CCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG...GGGTGCAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCTGGGGGCGACCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp GCACTCCGAGGGCCGTCAGCTGAGCCCCTGCGGGCGGGGGATGAGGTGCCCATTCGGCCTGCAATGGCCTaGACCCTGCCTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ALRGPSAEPLRAGDEVPIRPAMA*TLPASP
Trigger: AGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCG...AATGGGCACCTCATCCCCCGCCCGCAGGGGCTCAGCTGACGGCCCTCGGAGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCACTGGCCGGCTGGCCTaGGTGAGGGGCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPTGRLA*VRGWGG
Trigger: CCCACCCCAGCCCCTCACCCAGGCCAGCCGGCCAGT...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp AGCCCCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGGCCCCACAAAGGGCCTaGGGTGCTGCCTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: SPMYLPLLCPVLGPASRAAPQRA*GAAWAC
Trigger: ACATGCCCAGGCAGCACCTCAGGCCCTTTGTGGGGC...CGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGCCCCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTCAGGGGCTGGCCGGTaGGCCTGGCTCCTATTGTCC +
Preference number: 4 (lower is better)
Translates to: SPMYLPLLCPVLGPASRASGAGR*AWLLLS
Trigger: GGACAATAGGAGCCAGGCGCACCGGCCAGCCCCTGA...CGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGCCCCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGCCTGTGGTGGGGCTGTaGCTGGTGCAGGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SPMYLPLLCPVLGPASRAPVVGL*LVQVQA
Trigger: AGCCTGCACCTGCACCAGGCACAGCCCCACCACAGG...CGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp GGACCCAGACTAGCAGCACCAGGCTGCCCAGCAGGCCGCCCACGACACCAACCAGGGGACGGTGACACCTaGTGCCTGGGCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: GPRLAAPGCPAGRPRHQPGDGDT*CLGSLW
Trigger: CCACAGTGAGCCCAGGCAGCAGGTGTCACCGTCCCC...TGGTTGGTGTCGTGGGCGGCCTGCTGGGCAGCCTGGTGCTGCTAGTCTGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR GCA 90 bp TGCGTCCAGGGCGTTTCGGGATGCCACTGCCAGGGGCACCTTGGCTGCTCCAAGGGATGCTGGTGGCCCTaGCCCAGGAGTGGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: CVQGVSGCHCQGHLGCSKGCWWP*PRSGGA
Trigger: TGCACCCCCACTCCTGGGGCAGGGCCACCAGCATCC...CTTGGAGCAGCCAAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTGGACGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp AGCCCCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTGGCCAGGGCGCCTGTaGGATCTGCATGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SPMYLPLLCPVLGPASRAWPGRL*DLHAWS
Trigger: GCTCCAGGCATGCAGATCCCACAGGCGCCCTGGCCA...CGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGCAGTCCTGGCCGGGCTaGCTGCGGTCCTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLQSWPG*LRSSGK
Trigger: CTTCCCCGAGGACCGCAGCCAGCCCGGCCAGGACTG...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp AGGGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCACGGAAGCGGCAGTCCTaGCCGGGCTGGCTGCGGTCC +
Preference number: 4 (lower is better)
Translates to: RGTLAAPRPSPTSPQVQARKRQS*PGWLRS
Trigger: GGACCGCAGCCAGCCCGGCCAGGACTGCCGCTTCCG...TGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp GCGCCTGGCTCCTATTGTCCCTCGTGCGGCCCGGGAGCAGATGACGGCCAGGACGGCTGGGGTGGGCTGTaGGCACTTCTGCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: APGSYCPSCGPGADDGQDGWGGL*ALLPFS
Trigger: AGAGAAGGGCAGAAGTGCCCACAGCCCACCCCAGCC...GTCCTGGCCGTCATCTGCTCCCGGGCCGCACGAGGGACAATAGGAGCCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGACTGGCCGGCTGGCCTaGGTGAGGGGCTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALTGRLA*VRGWGG
Trigger: CCCACCCCAGCCCCTCACCCAGGCCAGCCGGCCAGT...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CAGGCTGCCCAGCAGGCCGCCCACGACACCAACCACCAGGGTTTGGAACTGGCCGCTGGCCGGTGCGCCTaGCTCCTATTGTCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: QAAQQAAHDTNHQGLELAAGRCA*LLLSLV
Trigger: CACGAGGGACAATAGGAGCCAGGCGCACCGGCCAGC...GGCCAGTTCCAAACCCTGGTGGTTGGTGTCGTGGGCGGCCTGCTGGGCAGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp CCCGGTCGCCCCCAGGCAGCTCAGCCCCTGGACGGCCTGCAATGGCCTGCACCCTCTGCAGAACACTGGTaGCCAAGGAAGCCGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PGRPQAAQPLDGLQWPAPSAEHW*PRKPVR
Trigger: TCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGA...GGGTGCAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCTGGGGGCGACCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp GGACCCAGACTAGCAGCACCAGGCTGCCCAGCAGGCCGCCCACGACACCAACCATGGTGGGGCTGTGCCTaGTGCAGGTGCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GPRLAAPGCPAGRPRHQPWWGCA*CRCRLE
Trigger: CTCCAGCCTGCACCTGCACCAGGCACAGCCCCACCA...TGGTTGGTGTCGTGGGCGGCCTGCTGGGCAGCCTGGTGCTGCTAGTCTGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGCCACCCAGGCCCTGGTaGGAGCCCGGCCAACCCCTT +
Preference number: 4 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLPPRPW*EPGQPL
Trigger: AAGGGGTTGGCCGGGCTCCCACCAGGGCCTGGGTGG...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCCCTGCGGGCGGGGGATaGGGTGCCCATTCCGCTAGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCPAGGG*GAHSAR
Trigger: CCTAGCGGAATGGGCACCTCATCCCCCGCCCGCAGG...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGCCTGCGGGCGGGGGATaGGGTGCCCATTCCGCTAGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALPAGGG*GAHSAR
Trigger: CCTAGCGGAATGGGCACCTCATCCCCCGCCCGCAGG...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTTTCCCCTGTAGGGGACGGTaGCACCTGCTGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PCTSHSCAQSWALRPGRFPCRGR*HLLPGL
Trigger: GAGCCCAGGCAGCAGGTGTCACCGTCCCCTACAGGG...GAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCTGTGCCTGGTGCAGGTaGAGGCTGGAGCCCCGGTCG +
Preference number: 4 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPCAWCR*RLEPRS
Trigger: CGACCGGGGCTCCAGCCTGCACCTGCACCAGGCACA...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp GGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCTGTGTGCCTGGTGCAGGTaGAGGCTGGAGCCCCGGTCG +
Preference number: 4 (lower is better)
Translates to: GSRSEGPRAVSILRPQWLCAWCR*RLEPRS
Trigger: CGACCGGGGCTCCAGCCTGCACCTGCACCAGGCACA...CAGCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCCGCCTGGATaGTGGTGGCCCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALCWPPG*WWPCPR
Trigger: CCTGGGGCAGGGCCACCAGCATCCAGGCGGCCAGCA...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGGGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCATGCTGGCCGCCTGGATaGTGGTGGCCCTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RGTLAAPRPSPTSPQVQACWPPG*WWPCPR
Trigger: CCTGGGGCAGGGCCACCAGCATCCAGGCGGCCAGCA...TGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCCAGTCCTGGCCGGGCTaGCTGCGGTCCTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCQSWPG*LRSSGK
Trigger: CTTCCCCGAGGACCGCAGCCAGCCCGGCCAGGACTG...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTTTCGGTGAGGGGCTGGGGTaGGCTGTGGGCACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PCTSHSCAQSWALRPGRFGEGLG*AVGTSA
Trigger: GGCAGAAGTGCCCACAGCCCACCCCAGCCCCTCACC...GAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCTCCTCCTTCAGGGGCTaGCCGGTGCGCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPSSFRG*PVRLAP
Trigger: AGGAGCCAGGCGCACCGGCCAGCCCCTGAAGGAGGA...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTCCTCCTTCAGGGGCTaGCCGGTGCGCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PCLLLLRKCADPGSWWRVSSFRG*PVRLAP
Trigger: AGGAGCCAGGCGCACCGGCCAGCCCCTGAAGGAGGA...GACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTCCTCCTTCAGGGGCTaGCCGGTGCGCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRSSFRG*PVRLAP
Trigger: AGGAGCCAGGCGCACCGGCCAGCCCCTGAAGGAGGA...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGGGTGCAGGTGCAGGCTaGAGCCCCGGTCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQGAGAG*SPGRPQ
Trigger: CTGGGGGCGACCGGGGCTCCAGCCTGCACCTGCACC...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCTGTGAGGGGCTGGGGTaGAATGCGGCGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPCEGLG*NAAAGG
Trigger: GCCTCCTGCCGCCGCATTCCACCCCAGCCCCTCACA...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCCTCCCAACACCCAGGTaGCCACAGCTGGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGLPTPR*PQLGGA
Trigger: GGCCCCTCCCAGCTGTGGCCACCTGGGTGTTGGGAG...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCCCACCCAGGCCCTGGTaGGAGCCCGGCCAACCCCTT +
Preference number: 4 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCPPRPW*EPGQPL
Trigger: AAGGGGTTGGCCGGGCTCCCACCAGGGCCTGGGTGG...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTCCGCCTGGATGCTGGTaGCCCTGCCCCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCPPGCW*PCPRSG
Trigger: CCCACTCCTGGGGCAGGGCCACCAGCATCCAGGCGG...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCCCCGCAGGCTCTCTTTaGTCTGCGCCTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPPAGSL*SAPWGP
Trigger: TGGCCCCCAAGGCGCAGATCAAAGAGAGCCTGCGGG...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp CCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTTTCCCCGCAGGCTCTCTTTaGTCTGCGCCTTGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PCTSHSCAQSWALRPGRFPAGSL*SAPWGP
Trigger: TGGCCCCCAAGGCGCAGATCAAAGAGAGCCTGCGGG...GAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCGAACACAGGCACGGCTaGGGGGTCCTCCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGEHRHG*GVLLQG
Trigger: CCCCTGAAGGAGGACCCCTCAGCCGTGCCTGTGTTC...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGCCTGCGGGCGGGGGATaGGGTGCCCATTCCGCTAGG +
Preference number: 4 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQPAGGG*GAHSAR
Trigger: CCTAGCGGAATGGGCACCTCATCCCCCGCCCGCAGG...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGCCCTGTAGGGGACGGTaGCACCTGCTGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PRKPVRGAKSSVHPQASVPCRGR*HLLPGL
Trigger: GAGCCCAGGCAGCAGGTGTCACCGTCCCCTACAGGG...CACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR TCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGCTCTCCCGAGTGGTGTaGGGGGCTGGGGTGGAATGC +
Preference number: 4 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLLSRVV*GAGVEC
Trigger: GCATTCCACCCCAGCCCCTCACACCACTCGGGAGAG...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCCCAGCCCTGCCCTCCTaGCCTTGGGACCGTAGGATG +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRPALPS*PWDRRM
Trigger: CATCCTACGGTCCCAAGGTCAGGAGGGCAGGGCTGG...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGGGCGCCTGTGGGATCTaGATGCCTGGAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLGACGI*MPGAAP
Trigger: TGGGGCTGCTCCAGGCATGCAGATCCCACAGGCGCC...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp GGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGCCGGTCAGAGGGGCCAAGAGCGGCGCCTGTGGGATCTaGATGCCTGGAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: GGSAEHWWPRKPVRGAKSGACGI*MPGAAP
Trigger: TGGGGCTGCTCCAGGCATGCAGATCCCACAGGCGCC...GCTCTTGGCCCCTCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR GCA 90 bp AGCCCCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGGCTTGTCCGTCTGGTTaGTGGGGCTCATGCGGTACC +
Preference number: 4 (lower is better)
Translates to: SPMYLPLLCPVLGPASRAACPSG*WGSCGT
Trigger: GGTACCGCATGAGCCCCAGCAACCAGACGGACAAGC...CGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCCCCCACAGAGGTAGGTaGCGCTGTCATTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRPHRGR*RCHCAG
Trigger: CCCGGCGCAATGACAGCGGCACCTACCTCTGTGGGG...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCCCCCACAGAGGTAGGTaGCGCTGTCATTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGPHRGR*RCHCAG
Trigger: CCCGGCGCAATGACAGCGGCACCTACCTCTGTGGGG...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp TGCGTCCAGGGCGTTTCGGGATGCCACTGCCAGGGGCACCTTGGCTGCTCCAAGGACGGTGACACCTGCTaGCTGGGCTCACTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: CVQGVSGCHCQGHLGCSKDGDTC*LGSLWA
Trigger: TGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC...CTTGGAGCAGCCAAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTGGACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCGGTGGAGGGGTTTCCTaGCCTGCCCACCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGGGGVS*PAHHSQ
Trigger: CTGGCTGTGGTGGGCAGGGCAGGAAACCCCTCCACC...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCGGATGCTGGTGGCCCTaGCCCAGGAGTGGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCGCWWP*PRSGGA
Trigger: TGCACCCCCACTCCTGGGGCAGGGCCACCAGCATCC...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTCCCAGCCACTCAGGTaGCTGCTGGCCGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRSQPLR*LLAAWM
Trigger: CATCCAGGCGGCCAGCAGGCACCTGAGTGGCTGGGA...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTCACCGCCCAGACGACTaGCCAGGGCGCCTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCHRPDD*PGRLWD
Trigger: ATCCCACAGGCGCCCTGGCCAGTCGTCTGGGCGGTG...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTCGGAAGCGGCAGTCCTaGCCGGGCTGGCTGCGGTCC +
Preference number: 4 (lower is better)
Translates to: DGDTCCLGSLWALRHESCRKRQS*PGWLRS
Trigger: GGACCGCAGCCAGCCCGGCCAGGACTGCCGCTTCCG...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp TGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGGTGAGGGGCTGGGGTaGGCTGTGGGCACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CADPGSWWRVCRTLVAKEGEGLG*AVGTSA
Trigger: GGCAGAAGTGCCCACAGCCCACCCCAGCCCCTCACC...TTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGGCTGGCCGGTGCGCCTaGCTCCTATTGTCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLAGRCA*LLLSLV
Trigger: CACGAGGGACAATAGGAGCCAGGCGCACCGGCCAGC...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTCAGGCCTCAGTGGCTaGGCACTCCGAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRSGLSG*ALRGPS
Trigger: TGACGGCCCTCGGAGTGCCCAGCCACTGAGGCCTGA...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTCAGGCCTCAGTGGCTaGGCACTCCGAGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: PCLLLLRKCADPGSWWRVSGLSG*ALRGPS
Trigger: TGACGGCCCTCGGAGTGCCCAGCCACTGAGGCCTGA...GACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGAGGCAGCTCAGCCCCTaGACGGCCTGCAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLRQLSP*TACNGL
Trigger: CAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCT...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCAGGCAGCTCAGCCCCTaGACGGCCTGCAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGRQLSP*TACNGL
Trigger: CAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCT...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACAGGTGCAGGTGCAGGCTaGAGCCCCGGTCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTGAGAG*SPGRPQ
Trigger: CTGGGGGCGACCGGGGCTCCAGCCTGCACCTGCACC...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGCAGGTGCAGGCTaGAGCCCCGGTCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: DGDTCCLGSLWALRHESCGAGAG*SPGRPQ
Trigger: CTGGGGGCGACCGGGGCTCCAGCCTGCACCTGCACC...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp GGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCTGTGGTGGGGCTGTGCCTaGTGCAGGTGCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GSRSEGPRAVSILRPQWLWWGCA*CRCRLE
Trigger: CTCCAGCCTGCACCTGCACCAGGCACAGCCCCACCA...CAGCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp TGCGTCCAGGGCGTTTCGGGATGCCACTGCCAGGGGCACCTTGGCTGCTCCAAGCTGCCAGGGGCACCTTaGCTGCTCCAAGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: CVQGVSGCHCQGHLGCSKLPGAP*LLQGHL
Trigger: GAGATGGCCTTGGAGCAGCCAAGGTGCCCCTGGCAG...CTTGGAGCAGCCAAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTGGACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGTCCCTCTCCCGAGTaGTGTGAGGGGCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PCLLLLRKCADPGSWWRVCPSPE*CEGLGW
Trigger: CCACCCCAGCCCCTCACACCACTCGGGAGAGGGACA...GACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGCCTGCTGGCCGCCTaGATGCTGGTGGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQCLLAA*MLVALP
Trigger: GGGCAGGGCCACCAGCATCCAGGCGGCCAGCAGGCA...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCCACTCAGGTGCCTGCTaGCCGCCTGGATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRHSGAC*PPGCWW
Trigger: CCACCAGCATCCAGGCGGCCAGCAGGCACCTGAGTG...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCGAACACAGGCACGGCTaGGGGGTCCTCCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCEHRHG*GVLLQG
Trigger: CCCCTGAAGGAGGACCCCTCAGCCGTGCCTGTGTTC...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTCCTGCGGGCGGGGGATaGGGTGCCCATTCCGCTAGG +
Preference number: 4 (lower is better)
Translates to: DGDTCCLGSLWALRHESCPAGGG*GAHSAR
Trigger: CCTAGCGGAATGGGCACCTCATCCCCCGCCCGCAGG...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCCCTGAGGAAATGCGCTaGCCCGGGCTCATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRPEEMR*PGLMVE
Trigger: CTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGG...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CAGCAGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCCCTGCCTGCTTCTCCTaGGGAAATGCGCTGACCCGG +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQQRFRELDAGSPACFS*GNALTR
Trigger: CCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGG...GCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCCCTGCCTGCTTCTCCTaGGGAAATGCGCTGACCCGG +
Preference number: 4 (lower is better)
Translates to: PCLLLLRKCADPGSWWRVPACFS*GNALTR
Trigger: CCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGG...GACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCACCCTGTAGGGGACGGTaGCACCTGCTGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QRFRELDAGSSVLAGPEAPCRGR*HLLPGL
Trigger: GAGCCCAGGCAGCAGGTGTCACCGTCCCCTACAGGG...TGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCGCCCCACAAAGGGCCTaGGGTGCTGCCTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCAPQRA*GAAWAC
Trigger: ACATGCCCAGGCAGCACCTCAGGCCCTTTGTGGGGC...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGGGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCAGGCGCCTGTGGGATCTaGATGCCTGGAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RGTLAAPRPSPTSPQVQAGACGI*MPGAAP
Trigger: TGGGGCTGCTCCAGGCATGCAGATCCCACAGGCGCC...TGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCGGCGCCTGTGGGATCTaGATGCCTGGAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: KEAGQRGQEQCPSSGLSGGACGI*MPGAAP
Trigger: TGGGGCTGCTCCAGGCATGCAGATCCCACAGGCGCC...GCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTCAGGGGCTGGCCGGTaGGCCTGGCTCCTATTGTCC +
Preference number: 4 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALSGAGR*AWLLLS
Trigger: GGACAATAGGAGCCAGGCGCACCGGCCAGCCCCTGA...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGAGCCCCTGGACGGCCTaGAATGGCCTGCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVSPWTA*NGLHPA
Trigger: GGCAGGGTGCAGGCCATTGCAGGCCGTCCAGGGGCT...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp TGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAACCTGTGGTGGGGCTGTaGCTGGTGCAGGTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: CADPGSWWRVCRTLVAKEPVVGL*LVQVQA
Trigger: AGCCTGCACCTGCACCAGGCACAGCCCCACCACAGG...TTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGGACGGTGACACCTGCTaGCTGGGCTCACTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLDGDTC*LGSLWA
Trigger: TGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCGGGGACGGTGACACCTaGTGCCTGGGCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCGDGDT*CLGSLW
Trigger: CCACAGTGAGCCCAGGCAGCAGGTGTCACCGTCCCC...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCGTTTCGGGATGCCACTaGCAGGGGCACCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRVSGCH*QGHLGC
Trigger: GCAGCCAAGGTGCCCCTGGCAGTGGCATCCCGAAAC...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCCAGGGCGTTTCGGGATaGCACTGCCAGGGGCACCTT +
Preference number: 4 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPQGVSG*HCQGHL
Trigger: AAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTG...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGGGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCAGGCAGGAGGCCAGAGTaGTGGCTGGGCCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: RGTLAAPRPSPTSPQVQAGRRPE*WLGLKG
Trigger: GCCTTTCAGGCCCAGCCAGCACTCTGGCCTCCTGCC...TGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCGGCAGGAGGCCAGAGTaGTGGCTGGGCCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCGRRPE*WLGLKG
Trigger: GCCTTTCAGGCCCAGCCAGCACTCTGGCCTCCTGCC...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGAGCCACTCAGGTGCCTaGTGGCCGCCTGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALSHSGA*WPPGCW
Trigger: CCAGCATCCAGGCGGCCAGCAGGCACCTGAGTGGCT...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGGGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCATCCCAGCCACTCAGGTaGCTGCTGGCCGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: RGTLAAPRPSPTSPQVQASQPLR*LLAAWM
Trigger: CATCCAGGCGGCCAGCAGGCACCTGAGTGGCTGGGA...TGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCCGCCTTCTCCACTaGTCAGGCGGAGGTGAGCGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALCRLLH*SGGGER
Trigger: CCGCTCACCTCCGCCTGAGCAGTGGAGAAGGCGGCA...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618185.3
CDS-3UTR CCA 90 bp AAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCTGGCCAGGGCGCCTGTaGGATCTGCATGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KEAGQRGQEQCPSSGLSGWPGRL*DLHAWS
Trigger: GCTCCAGGCATGCAGATCCCACAGGCGCCCTGGCCA...GCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp CCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGTGGCCAGGGCGCCTGTaGGATCTGCATGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PRKPVRGAKSSVHPQASVWPGRL*DLHAWS
Trigger: GCTCCAGGCATGCAGATCCCACAGGCGCCCTGGCCA...CACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGGCCAGCTTGTCCGTCTaGTTGCTGGGGCTCATGCGG +
Preference number: 4 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLASLSV*LLGLMR
Trigger: CCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGC...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTTTCGGCTGGGGTGGGCTGTaGGCACTTCTGCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PCTSHSCAQSWALRPGRFGWGGL*ALLPFS
Trigger: AGAGAAGGGCAGAAGTGCCCACAGCCCACCCCAGCC...GAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGGCTGGCCGGTGCGCCTaGCTCCTATTGTCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALAGRCA*LLLSLV
Trigger: CACGAGGGACAATAGGAGCCAGGCGCACCGGCCAGC...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCCGGTGCGCCTaGCTCCTATTGTCCCTCGTG +
Preference number: 4 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCAGRCA*LLLSLV
Trigger: CACGAGGGACAATAGGAGCCAGGCGCACCGGCCAGC...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGATCCTCAGGCCTCAGTaGCTGGGCACTCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALILRPQ*LGTPRA
Trigger: GGCCCTCGGAGTGCCCAGCCACTGAGGCCTGAGGAT...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp AGGGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCAATCCTCAGGCCTCAGTaGCTGGGCACTCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RGTLAAPRPSPTSPQVQAILRPQ*LGTPRA
Trigger: GGCCCTCGGAGTGCCCAGCCACTGAGGCCTGAGGAT...TGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp AAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCATCCTCAGGCCTCAGTaGCTGGGCACTCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: KEAGQRGQEQCPSSGLSGILRPQ*LGTPRA
Trigger: GGCCCTCGGAGTGCCCAGCCACTGAGGCCTGAGGAT...GCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCCTGGACGGCCTGCAATaGCCTGCACCCTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPLDGLQ*PAPCLL
Trigger: AAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAG...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp GGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCTGCTGGACGGCCTGCAATaGCCTGCACCCTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: GSRSEGPRAVSILRPQWLLDGLQ*PAPCLL
Trigger: AAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAG...CAGCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp TGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAATGGTGGGGCTGTGCCTaGTGCAGGTGCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CADPGSWWRVCRTLVAKEWWGCA*CRCRLE
Trigger: CTCCAGCCTGCACCTGCACCAGGCACAGCCCCACCA...TTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp TGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAATGTCCCTCTCCCGAGTaGTGTGAGGGGCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: CADPGSWWRVCRTLVAKECPSPE*CEGLGW
Trigger: CCACCCCAGCCCCTCACACCACTCGGGAGAGGGACA...TTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTCCGCCTGGATGCTGGTaGCCCTGCCCCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: DGDTCCLGSLWALRHESCPPGCW*PCPRSG
Trigger: CCCACTCCTGGGGCAGGGCCACCAGCATCCAGGCGG...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp TGCGTCCAGGGCGTTTCGGGATGCCACTGCCAGGGGCACCTTGGCTGCTCCAAGTGGAGAAGCTGCAGGTaGAGGTGGCGTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: CVQGVSGCHCQGHLGCSKWRSCR*RWRCPL
Trigger: AAGGGGACAACGCCACCTTCACCTGCAGCTTCTCCA...CTTGGAGCAGCCAAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTGGACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp AGGGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCACATTGCGCCGGGCCCTaGCCACGCTCATGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RGTLAAPRPSPTSPQVQAHCAGP*PRSCGS
Trigger: ACTTCCACATGAGCGTGGTCAGGGCCCGGCGCAATG...TGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp CCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTTTCTTCTCTCTGTCACCCTaGGCTCTGCCCGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PCTSHSCAQSWALRPGRFFSLSP*ALPAGS
Trigger: AGAGCCTGCGGGCAGAGCTCAGGGTGACAGAGAGAA...GAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGGAACACAGGCACGGCTaGGGGGTCCTCCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQEHRHG*GVLLQG
Trigger: CCCCTGAAGGAGGACCCCTCAGCCGTGCCTGTGTTC...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp ACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGGGGCTGAACACAGGCACGGCTaGGGGGTCCTCCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TCCLGSLWALRHESCGGAEHRHG*GVLLQG
Trigger: CCCCTGAAGGAGGACCCCTCAGCCGTGCCTGTGTTC...AGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGCCTGAGGAAATGCGCTaGCCCGGGCTCATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PRKPVRGAKSSVHPQASVPEEMR*PGLMVE
Trigger: CTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGG...CACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR TCA 90 bp CAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCCTGCCTGCTTCTCCTaGGGAAATGCGCTGACCCGG +
Preference number: 4 (lower is better)
Translates to: QQQQQQQRFRELDAGSSVPACFS*GNALTR
Trigger: CCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGG...CACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTTTCAGGCTCTCTTTGATCTaGGCCTTGGGGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PCTSHSCAQSWALRPGRFRLSLI*ALGARE
Trigger: CTCCCTGGCCCCCAAGGCGCAGATCAAAGAGAGCCT...GAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCAGGCTCTCTTTGATCTaGGCCTTGGGGGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRRLSLI*ALGARE
Trigger: CTCCCTGGCCCCCAAGGCGCAGATCAAAGAGAGCCT...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTCCTATTGTCCCTCGTaGGGCCCGGGAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRSYCPS*GPGADD
Trigger: GTCATCTGCTCCCGGGCCGCACGAGGGACAATAGGA...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTTTCTCCTATTGTCCCTCGTaGGGCCCGGGAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: PCTSHSCAQSWALRPGRFSYCPS*GPGADD
Trigger: GTCATCTGCTCCCGGGCCGCACGAGGGACAATAGGA...GAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CAGCAGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCGTGGCATACTCCGTCTaGTCAGGGACACAGGGCACG +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQQRFRELDAGSVAYSV*SGTQGT
Trigger: CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCAC...GCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCGTGGCATACTCCGTCTaGTCAGGGACACAGGGCACG +
Preference number: 4 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGVAYSV*SGTQGT
Trigger: CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCAC...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTAGCCCCTGGACGGCCTaGAATGGCCTGCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: DGDTCCLGSLWALRHESCSPWTA*NGLHPA
Trigger: GGCAGGGTGCAGGCCATTGCAGGCCGTCCAGGGGCT...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACATGTGCCTGGTGCAGGTaGAGGCTGGAGCCCCGGTCG +
Preference number: 4 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTCAWCR*RLEPRS
Trigger: CGACCGGGGCTCCAGCCTGCACCTGCACCAGGCACA...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp TGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGACGGTGACACCTGCTaGCTGGGCTCACTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: CADPGSWWRVCRTLVAKEDGDTC*LGSLWA
Trigger: TGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC...TTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp ACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGGGGCTGGGGACGGTGACACCTaGTGCCTGGGCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: TCCLGSLWALRHESCGGAGDGDT*CLGSLW
Trigger: CCACAGTGAGCCCAGGCAGCAGGTGTCACCGTCCCC...AGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGGGGACGGTGACACCTaGTGCCTGGGCTCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVGDGDT*CLGSLW
Trigger: CCACAGTGAGCCCAGGCAGCAGGTGTCACCGTCCCC...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCCAGGGGCACCTTGGCTaGTCCAAGGCCATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: PCLLLLRKCADPGSWWRVQGHLG*SKAISN
Trigger: GTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCTG...GACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGGTGGAGGGGTTTCCTaGCCTGCCCACCACAGCCAG +
Preference number: 4 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVGGGVS*PAHHSQ
Trigger: CTGGCTGTGGTGGGCAGGGCAGGAAACCCCTCCACC...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGAAAGGCCTCCAGCTCTaGCTGCCCGCTTACTGCCTC +
Preference number: 4 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLKGLQL*LPAYCL
Trigger: GAGGCAGTAAGCGGGCAGGCAGAGCTGGAGGCCTTT...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CAGCAGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCAAAGGCCTCCAGCTCTaGCTGCCCGCTTACTGCCTC +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQQRFRELDAGSKGLQL*LPAYCL
Trigger: GAGGCAGTAAGCGGGCAGGCAGAGCTGGAGGCCTTT...GCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAAGCCACTCAGGTGCCTaGTGGCCGCCTGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: QRFRELDAGSSVLAGPEASHSGA*WPPGCW
Trigger: CCAGCATCCAGGCGGCCAGCAGGCACCTGAGTGGCT...TGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGTGGCCAGGGCGCCTGTaGGATCTGCATGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVWPGRL*DLHAWS
Trigger: GCTCCAGGCATGCAGATCCCACAGGCGCCCTGGCCA...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp AGGGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCAGCCAGCTTGTCCGTCTaGTTGCTGGGGCTCATGCGG +
Preference number: 4 (lower is better)
Translates to: RGTLAAPRPSPTSPQVQAASLSV*LLGLMR
Trigger: CCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGC...TGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCCTGACCACGCTCATGTaGAAGTCACGCCCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PCLLLLRKCADPGSWWRVLTTLM*KSRPLG
Trigger: GCCCAACGGGCGTGACTTCCACATGAGCGTGGTCAG...GACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGCTGACCACGCTCATGTaGAAGTCACGCCCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLLTTLM*KSRPLG
Trigger: GCCCAACGGGCGTGACTTCCACATGAGCGTGGTCAG...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CCGCTAGGAAAGACAATGGTGGCATACTCCGTCTGCTCAGGGACACAGGGCACGGGTGAGGGGCTGGGGTaGGCTGTGGGCACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PLGKTMVAYSVCSGTQGTGEGLG*AVGTSA
Trigger: GGCAGAAGTGCCCACAGCCCACCCCAGCCCCTCACC...CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCACCATTGTCTTTCCTAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGAGGGGCTGGGGTaGGCTGTGGGCACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: DGDTCCLGSLWALRHESCGEGLG*AVGTSA
Trigger: GGCAGAAGTGCCCACAGCCCACCCCAGCCCCTCACC...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp GGACCCAGACTAGCAGCACCAGGCTGCCCAGCAGGCCGCCCACGACACCAACCATCTGCAGAACACTGGTaGCCAAGGAAGCCGGTCAGA +
Preference number: 4 (lower is better)
Translates to: GPRLAAPGCPAGRPRHQPSAEHW*PRKPVR
Trigger: TCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGA...TGGTTGGTGTCGTGGGCGGCCTGCTGGGCAGCCTGGTGCTGCTAGTCTGGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp GGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCAGGGGGTCTGCAGAACACTaGTGGCCAAGGAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: GHLGCSKAISNQPPSSGRGSAEH*WPRKPV
Trigger: GACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCC...CCTGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCGACCCGGGCTCATGGTaGAGGGTCTGCAGAACACTG +
Preference number: 4 (lower is better)
Translates to: PCLLLLRKCADPGSWWRVDPGSW*RVCRTL
Trigger: CAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTC...GACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCGACCCGGGCTCATGGTaGAGGGTCTGCAGAACACTG +
Preference number: 4 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPDPGSW*RVCRTL
Trigger: CAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTC...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGCCGGTCAGACCCGGGCTCATGGTaGAGGGTCTGCAGAACACTG +
Preference number: 4 (lower is better)
Translates to: PGLMVEGLQNTGGQGSRSDPGSW*RVCRTL
Trigger: CAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTC...TGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCGCTGACCCGGGCTCATaGTGGAGGGTCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRADPGS*WRVCRT
Trigger: TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGC...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGCTGGACGGCCTGCAATaGCCTGCACCCTGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PRKPVRGAKSSVHPQASVLDGLQ*PAPCLL
Trigger: AAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAG...CACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp TGCGTCCAGGGCGTTTCGGGATGCCACTGCCAGGGGCACCTTGGCTGCTCCAAGAGAGATTCAGGGAGCTaGACGCAGGCAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: CVQGVSGCHCQGHLGCSKRDSGS*TQAALC
Trigger: GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT...CTTGGAGCAGCCAAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTGGACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACATGTGAGGGGCTGGGGTaGAATGCGGCGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTCEGLG*NAAAGG
Trigger: GCCTCCTGCCGCCGCATTCCACCCCAGCCCCTCACA...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTCTCCCAACACCCAGGTaGCCACAGCTGGGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: DGDTCCLGSLWALRHESCLPTPR*PQLGGA
Trigger: GGCCCCTCCCAGCTGTGGCCACCTGGGTGTTGGGAG...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CAGCAGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTGTGGATGTGAGGAGTaGATAGGCCACGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQQRFRELDAGSCGCEE*IGHGGG
Trigger: ACCCCCGCCGTGGCCTATCCACTCCTCACATCCACA...GCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp ACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGGGGCTCACTCAGGTGCCTGCTaGCCGCCTGGATGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TCCLGSLWALRHESCGGAHSGAC*PPGCWW
Trigger: CCACCAGCATCCAGGCGGCCAGCAGGCACCTGAGTG...AGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGGAGAAGCTGCAGGTaGAGGTGGCGTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRWRSCR*RWRCPL
Trigger: AAGGGGACAACGCCACCTTCACCTGCAGCTTCTCCA...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTCGTTGGGCAGTTGTGTaGCACGGAAGCGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCRWAVV*HGSGSP
Trigger: AGGACTGCCGCTTCCGTGTCACACAACTGCCCAACG...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp CCTCCTGACCTTGGGACCGTAGGATGTCCCTCTCCCGAGTGGTGTGAGGGGCTGGTGGGCATTGAGACATaGGTCCTGTGGTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPDLGTVGCPSPEWCEGLVGIET*VLWWGC
Trigger: ACAGCCCCACCACAGGACTCATGTCTCAATGCCCAC...CAGCCCCTCACACCACTCGGGAGAGGGACATCCTACGGTCCCAAGGTCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp GGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCTGGTGGGCATTGAGACATaGGTCCTGTGGTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GSRSEGPRAVSILRPQWLVGIET*VLWWGC
Trigger: ACAGCCCCACCACAGGACTCATGTCTCAATGCCCAC...CAGCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR TCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTGTGCTGGCAGGACCTaGAGCAGTGACTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGCAGRT*SSDCIW
Trigger: CCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACA...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGTGCTGGCAGGACCTaGAGCAGTGACTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRCAGRT*SSDCIW
Trigger: CCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACA...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp GGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCAGGGGCTGTGGGCACTTCTaGCCTTCTCTCTGTCACCCT +
Preference number: 4 (lower is better)
Translates to: GHLGCSKAISNQPPSSGRGCGHF*PSLCHP
Trigger: AGGGTGACAGAGAGAAGGGCAGAAGTGCCCACAGCC...CCTGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCTCCTATTGTCCCTCGTaGGGCCCGGGAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: KEAGQRGQEQCPSSGLSGSYCPS*GPGADD
Trigger: GTCATCTGCTCCCGGGCCGCACGAGGGACAATAGGA...GCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR GCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTTCAGGGGCTGGCCGGTaGGCCTGGCTCCTATTGTCC +
Preference number: 4 (lower is better)
Translates to: DGDTCCLGSLWALRHESCSGAGR*AWLLLS
Trigger: GGACAATAGGAGCCAGGCGCACCGGCCAGCCCCTGA...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACATCAGGGGCTGGCCGGTaGGCCTGGCTCCTATTGTCC +
Preference number: 4 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTSGAGR*AWLLLS
Trigger: GGACAATAGGAGCCAGGCGCACCGGCCAGCCCCTGA...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CAGCAGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCCTTCTCCTGAGGAAATaGGCTGACCCGGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQQRFRELDAGSLLLRK*ADPGSW
Trigger: CCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG...GCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp TGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAAACGCAGGCAGCTCTGTaGTGGCAGGACCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: CADPGSWWRVCRTLVAKETQAAL*WQDLKQ
Trigger: CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGT...TTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGTTTCGGGATGCCACTaGCAGGGGCACCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVVSGCH*QGHLGC
Trigger: GCAGCCAAGGTGCCCCTGGCAGTGGCATCCCGAAAC...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp TGCGTCCAGGGCGTTTCGGGATGCCACTGCCAGGGGCACCTTGGCTGCTCCAAGAAGGGCCTGAGGTGCTaGCTGGGCATGTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: CVQGVSGCHCQGHLGCSKKGLRC*LGMCKG
Trigger: ACCTTTACACATGCCCAGGCAGCACCTCAGGCCCTT...CTTGGAGCAGCCAAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTGGACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGCCCCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGACAAAGGGCCTGAGGTaGTGCCTGGGCATGTGTAAA +
Preference number: 4 (lower is better)
Translates to: SPMYLPLLCPVLGPASRATKGLR*CLGMCK
Trigger: TTTACACATGCCCAGGCAGCACCTCAGGCCCTTTGT...CGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGAGGTGCCTGCACTTCTaGCCTCCCAACACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALRCLHF*PPNTQV
Trigger: CACCTGGGTGTTGGGAGGGCAGAAGTGCAGGCACCT...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCTGTCCGTCTGGTTGCTaGGGCTCATGCGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPCPSGC*GSCGTS
Trigger: ACTGGTACCGCATGAGCCCCAGCAACCAGACGGACA...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACAATCCTCAGGCCTCAGTaGCTGGGCACTCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTILRPQ*LGTPRA
Trigger: GGCCCTCGGAGTGCCCAGCCACTGAGGCCTGAGGAT...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGGGTCTGCAGAACACTaGTGGCCAAGGAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCGSAEH*WPRKPV
Trigger: GACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCC...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CCGCTAGGAAAGACAATGGTGGCATACTCCGTCTGCTCAGGGACACAGGGCACGAGGCAGCTCAGCCCCTaGACGGCCTGCAATGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLGKTMVAYSVCSGTQGTRQLSP*TACNGL
Trigger: CAGGCCATTGCAGGCCGTCCAGGGGCTGAGCTGCCT...CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCACCATTGTCTTTCCTAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp CCTGAAACTTCTCTAGGCCTGCAGGGAGCAGATAACTCCTGGGGAGTCCCCAGCTGGTGGGGCTGTGCCTaGTGCAGGTGCAGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PETSLGLQGADNSWGVPSWWGCA*CRCRLE
Trigger: CTCCAGCCTGCACCTGCACCAGGCACAGCCCCACCA...GCTGGGGACTCCCCAGGAGTTATCTGCTCCCTGCAGGCCTAGAGAAGTTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp GGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGAGATTCAGGGAGCTaGACGCAGGCAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: GGSAEHWWPRKPVRGAKSRDSGS*TQAALC
Trigger: GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT...GCTCTTGGCCCCTCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGGAGCAGATAACTCCTaGGGAGTCCCCAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCGADNS*GVPSPM
Trigger: CATGGGGCTGGGGACTCCCCAGGAGTTATCTGCTCC...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGAGGAGGCCAGAGTGCTaGCTGGGCCTGAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQRRPEC*LGLKGL
Trigger: GAGGCCTTTCAGGCCCAGCCAGCACTCTGGCCTCCT...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGAGGAGGCCAGAGTGCTaGCTGGGCCTGAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVRRPEC*LGLKGL
Trigger: GAGGCCTTTCAGGCCCAGCCAGCACTCTGGCCTCCT...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACATTGCGCCGGGCCCTaGCCACGCTCATGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTHCAGP*PRSCGS
Trigger: ACTTCCACATGAGCGTGGTCAGGGCCCGGCGCAATG...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTCCTGCCTGCTTCTCCTaGGGAAATGCGCTGACCCGG +
Preference number: 4 (lower is better)
Translates to: DGDTCCLGSLWALRHESCPACFS*GNALTR
Trigger: CCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGG...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCGCTCACTGTGGGCATTaGGACATGAGTCCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGAHCGH*DMSPVV
Trigger: CACCACAGGACTCATGTCTCAATGCCCACAGTGAGC...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCGCTCACTGTGGGCATTaGGACATGAGTCCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PGRPAMACTLPASPEEMRAHCGH*DMSPVV
Trigger: CACCACAGGACTCATGTCTCAATGCCCACAGTGAGC...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp AGGGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCATGTGCTGGCAGGACCTaGAGCAGTGACTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: RGTLAAPRPSPTSPQVQACAGRT*SSDCIW
Trigger: CCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACA...TGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGCAGTGTGTGGATGTaGGGAGTGGATAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCCSVWM*GVDRPR
Trigger: CCGTGGCCTATCCACTCCTCACATCCACACACTGCA...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTCCTATTGTCCCTCGTaGGGCCCGGGAGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQSYCPS*GPGADD
Trigger: GTCATCTGCTCCCGGGCCGCACGAGGGACAATAGGA...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp ACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGGGGCTGTGGCATACTCCGTCTaGTCAGGGACACAGGGCACG +
Preference number: 4 (lower is better)
Translates to: TCCLGSLWALRHESCGGAVAYSV*SGTQGT
Trigger: CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCAC...AGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGCTTCTCCTGAGGAAATaGGCTGACCCGGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PRKPVRGAKSSVHPQASVLLLRK*ADPGSW
Trigger: CCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG...CACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR GCA 90 bp CTAGGAAAGACAATGGTGGCATACTCCGTCTGCTCAGGGACACAGGGCACGGGGGACGGTGACACCTGCTaGCTGGGCTCACTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGKTMVAYSVCSGTQGTGDGDTC*LGSLWA
Trigger: TGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC...CCCCGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCACCATTGTCTTTCCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR GCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGACGCAGGCAGCTCTGTaGTGGCAGGACCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQTQAAL*WQDLKQ
Trigger: CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGT...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGACGCAGGCAGCTCTGTaGTGGCAGGACCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVTQAAL*WQDLKQ
Trigger: CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGT...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTCAGGGCGTTTCGGGATaGCACTGCCAGGGGCACCTT +
Preference number: 4 (lower is better)
Translates to: DGDTCCLGSLWALRHESCQGVSG*HCQGHL
Trigger: AAGGTGCCCCTGGCAGTGGCATCCCGAAACGCCCTG...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAAGGTGCCTGCACTTCTaGCCTCCCAACACCCAGGTG +
Preference number: 4 (lower is better)
Translates to: QRFRELDAGSSVLAGPEARCLHF*PPNTQV
Trigger: CACCTGGGTGTTGGGAGGGCAGAAGTGCAGGCACCT...TGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACAGGCTGGGGTGGGCTGTaGGCACTTCTGCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTGWGGL*ALLPFS
Trigger: AGAGAAGGGCAGAAGTGCCCACAGCCCACCCCAGCC...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCTGCAGAACACTGGTaGCCAAGGAAGCCGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LQWPAPCLLLLRKCADPGSAEHW*PRKPVR
Trigger: TCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGA...GCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGGGTCTGCAGAACACTaGTGGCCAAGGAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVGSAEH*WPRKPV
Trigger: GACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCC...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp ACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGGGGCTGACCCGGGCTCATGGTaGAGGGTCTGCAGAACACTG +
Preference number: 4 (lower is better)
Translates to: TCCLGSLWALRHESCGGADPGSW*RVCRTL
Trigger: CAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTC...AGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp GCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGACTGCATCTGGCCCTCCCTGCCTGGGCTCACTGTaGGCATTGAGACATGAGTCC +
Preference number: 4 (lower is better)
Translates to: AGSSVLAGPEAVTASGPPCLGSL*ALRHES
Trigger: GGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCA...GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CCTGAAACTTCTCTAGGCCTGCAGGGAGCAGATAACTCCTGGGGAGTCCCCAGCCTGCCAGGGGCACCTTaGCTGCTCCAAGGCCATCTC +
Preference number: 4 (lower is better)
Translates to: PETSLGLQGADNSWGVPSLPGAP*LLQGHL
Trigger: GAGATGGCCTTGGAGCAGCCAAGGTGCCCCTGGCAG...GCTGGGGACTCCCCAGGAGTTATCTGCTCCCTGCAGGCCTAGAGAAGTTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGGGAGCAGATAACTCCTaGGGAGTCCCCAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQGADNS*GVPSPM
Trigger: CATGGGGCTGGGGACTCCCCAGGAGTTATCTGCTCC...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGTGGATGTGAGGAGTaGATAGGCCACGGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQCGCEE*IGHGGG
Trigger: ACCCCCGCCGTGGCCTATCCACTCCTCACATCCACA...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGTGGAGAAGCTGCAGGTaGAGGTGGCGTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVWRSCR*RWRCPL
Trigger: AAGGGGACAACGCCACCTTCACCTGCAGCTTCTCCA...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTTTCTCTCTGTCACCCTaGGCTCTGCCCGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: DGDTCCLGSLWALRHESCFSLSP*ALPAGS
Trigger: AGAGCCTGCGGGCAGAGCTCAGGGTGACAGAGAGAA...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp CAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGTGGGCATTGAGACATaGGTCCTGTGGTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: QRFRELDAGSSVLAGPEAVGIET*VLWWGC
Trigger: ACAGCCCCACCACAGGACTCATGTCTCAATGCCCAC...TGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp ACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGGGGCTGTGGGCATTGAGACATaGGTCCTGTGGTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TCCLGSLWALRHESCGGAVGIET*VLWWGC
Trigger: ACAGCCCCACCACAGGACTCATGTCTCAATGCCCAC...AGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCATGCAGTGTGTGGATGTaGGGAGTGGATAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: QRFRELDAGSSVLAGPEACSVWM*GVDRPR
Trigger: CCGTGGCCTATCCACTCCTCACATCCACACACTGCA...TGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGTGTCACCCTGAGCTCTaGCCGCAGGCTCTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQRFRELDAGSSVCHPEL*PQALFD
Trigger: ATCAAAGAGAGCCTGCGGGCAGAGCTCAGGGTGACA...CACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTCATGGTGGAGGGTCTaGAGAACACTGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCSWWRV*RTLVAK
Trigger: CTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGA...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGTCATGGTGGAGGGTCTaGAGAACACTGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QQQQQQQRFRELDAGSSVSWWRV*RTLVAK
Trigger: CTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGA...CACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTCATGGTGGAGGGTCTaGAGAACACTGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SSSSSSSRDSGSWTQAALSWWRV*RTLVAK
Trigger: CTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGA...CAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CCTGAAACTTCTCTAGGCCTGCAGGGAGCAGATAACTCCTGGGGAGTCCCCAGCCAGGGGCACCTTGGCTaGTCCAAGGCCATCTCCAAC +
Preference number: 4 (lower is better)
Translates to: PETSLGLQGADNSWGVPSQGHLG*SKAISN
Trigger: GTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCCCTG...GCTGGGGACTCCCCAGGAGTTATCTGCTCCCTGCAGGCCTAGAGAAGTTTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCAAGGGCCTGAGGTGCTaGCTGGGCATGTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCKGLRC*LGMCKG
Trigger: ACCTTTACACATGCCCAGGCAGCACCTCAGGCCCTT...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTTTCACAAAGGGCCTGAGGTaGTGCCTGGGCATGTGTAAA +
Preference number: 4 (lower is better)
Translates to: PCTSHSCAQSWALRPGRFTKGLR*CLGMCK
Trigger: TTTACACATGCCCAGGCAGCACCTCAGGCCCTTTGT...GAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp GGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGCTGGGCTGTGGGCACTTCTaGCCTTCTCTCAGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: GSRSEGPRAVSILRPQWLGCGHF*PSLSLA
Trigger: TGCTAAACTGAGAGAAGGGCAGAAGTGCCCACAGCC...CAGCCACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTCTGCAGAACACTGGTaGCCAAGGAAGCCGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCSAEHW*PRKPVR
Trigger: TCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGA...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp GACGGTGACACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGCTGACCCGGGCTCATaGTGGAGGGTCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: DGDTCCLGSLWALRHESCADPGS*WRVCRT
Trigger: TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGC...ACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGTGTCACCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGAGAGATTCAGGGAGCTaGACGCAGGCAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVRDSGS*TQAALC
Trigger: GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CCA 90 bp ACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGGGGCTAGAGATTCAGGGAGCTaGACGCAGGCAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: TCCLGSLWALRHESCGGARDSGS*TQAALC
Trigger: GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT...AGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACATGGAGAAGCTGCAGGTaGAGGTGGCGTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTWRSCR*RWRCPL
Trigger: AAGGGGACAACGCCACCTTCACCTGCAGCTTCTCCA...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR GCA 90 bp CAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGGGCTGTGGGCACTTCTaGCCTTCTCTCAGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: QQQQQQQRFRELDAGSSVGCGHF*PSLSLA
Trigger: TGCTAAACTGAGAGAAGGGCAGAAGTGCCCACAGCC...CACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACATGTCCGTCTGGTTGCTaGGGCTCATGCGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTCPSGC*GSCGTS
Trigger: ACTGGTACCGCATGAGCCCCAGCAACCAGACGGACA...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CCA 90 bp CGGGGTCTTCTCTCGCCACTGGAAATCCAGCTCCCCATAGTCCACAGAGAACACGCTGACCCGGGCTCATaGTGGAGGGTCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: RGLLSPLEIQLPIVHREHADPGS*WRVCRT
Trigger: TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGC...GTGTTCTCTGTGGACTATGGGGAGCTGGATTTCCAGTGGCGAGAGAAGACCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp GAACACTGGTGGCCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTTGCCTGGGCTCACTGTaGGCATTGAGACATGAGTCC +
Preference number: 4 (lower is better)
Translates to: EHWWPRKPVRGAKSSVHPCLGSL*ALRHES
Trigger: GGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCA...AGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGGCCACCAGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CCA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGTGCCTGGGCTCACTGTaGGCATTGAGACATGAGTCC +
Preference number: 4 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVCLGSL*ALRHES
Trigger: GGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCA...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR TCA 90 bp CCGCTAGGAAAGACAATGGTGGCATACTCCGTCTGCTCAGGGACACAGGGCACGGCTCACTGTGGGCATTaGGACATGAGTCCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PLGKTMVAYSVCSGTQGTAHCGH*DMSPVV
Trigger: CACCACAGGACTCATGTCTCAATGCCCACAGTGAGC...CGTGCCCTGTGTCCCTGAGCAGACGGAGTATGCCACCATTGTCTTTCCTAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR TCA 90 bp AGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCAGAGCCAGGAGCTCTTCTaGCCTTCCCTGAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: RDSGSWTQAALCWQDLKQSQELF*PSLKLL
Trigger: GAGAAGTTTCAGGGAAGGTCAGAAGAGCTCCTGGCT...CTGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR TCA 90 bp ACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGGGGCTAGCCAGGAGCTCTTCTaGCCTTCCCTGAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: TCCLGSLWALRHESCGGASQELF*PSLKLL
Trigger: GAGAAGTTTCAGGGAAGGTCAGAAGAGCTCCTGGCT...AGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR GCA 90 bp CCTGAAACTTCTCTAGGCCTGCAGGGAGCAGATAACTCCTGGGGAGTCCCCAGCTGTCACCCTGAGCTCTaGCCGCAGGCTCTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: PETSLGLQGADNSWGVPSCHPEL*PQALFD
Trigger: ATCAAAGAGAGCCTGCGGGCAGAGCTCAGGGTGACA...GCTGGGGACTCCCCAGGAGTTATCTGCTCCCTGCAGGCCTAGAGAAGTTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS CCA 90 bp CCGTTGGGCAGTTGTGTGACACGGAAGCGGCAGTCCTGGCCGGGCTaGCTGCGGTCCTCGGGGAAGGCGGCCAGCTTGTCCGTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PLGSCVTRKRQSWPG*LRSSGKAASLSVWL
Trigger: CAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGGACCGCAGCCAGCCCGGCCAGGACTGCCGCTTCCGTGTCACACAACTGCCCAACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS-3UTR CAA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTGCGCCTGGCTCCTATaGTCCCTCGTGCGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: PGRPAMACTLPASPEEMRCAWLL*SLVRPG
Trigger: CCCGGGCCGCACGAGGGACAATAGGAGCCAGGCGCA...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CAA 90 bp GGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCAGGCTCCTGTGCCCAGTCTaGGGCCCTGCGTCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: GHLGCSKAISNQPPSSGRLLCPV*GPASRA
Trigger: CGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAG...CCTGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS GCA 90 bp AGTTGTAGCACCGCCCAGACGACTGGCCAGGGCGCCTGTGGGATCTaGATGCCTGGAGCAGCCCCACCAGAGTGCCGCCTTCTCCACTGC +
Preference number: 5 (lower is better)
Translates to: SCSTAQTTGQGACGI*MPGAAPPECRLLHC
Trigger: GCAGTGGAGAAGGCGGCACTCTGGTGGGGCTGCTCCAGGCATGCAGATCCCACAGGCGCCCTGGCCAGTCGTCTGGGCGGTGCTACAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS GCA 90 bp CAGGGCGCCTGTGGGATCTGCATGCCTGGAGCAGCCCCACCAGAGTaGCGCCTTCTCCACTGCTCAGGCGGAGGTGAGCGGAAGGGAAAC +
Preference number: 5 (lower is better)
Translates to: QGACGICMPGAAPPE*RLLHCSGGGERKGN
Trigger: GTTTCCCTTCCGCTCACCTCCGCCTGAGCAGTGGAGAAGGCGGCACTCTGGTGGGGCTGCTCCAGGCATGCAGATCCCACAGGCGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618185.3
CDS CCA 90 bp CCGGGCTGGCTGCGGTCCTCGGGGAAGGCGGCCAGCTTGTCCGTCTaGTTGCTGGGGCTCATGCGGTACCAGTTTAGCACGAAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PGWLRSSGKAASLSV*LLGLMRYQFSTKLS
Trigger: GGAGAGCTTCGTGCTAAACTGGTACCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGGACCGCAGCCAGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS-3UTR CAA 90 bp GGGCACCTTGGCTGCTCCAAGGCCATCTCCAACCAGCCCCCAAGTTCAGGCAGGGCCCGCAGGCTCTCTTaGATCTGCGCCTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: GHLGCSKAISNQPPSSGRARRLS*ICALGA
Trigger: GGCCCCCAAGGCGCAGATCAAAGAGAGCCTGCGGGC...CCTGCCTGAACTTGGGGGCTGGTTGGAGATGGCCTTGGAGCAGCCAAGGTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CAA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTTGCGCCTGGCTCCTATaGTCCCTCGTGCGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCCAWLL*SLVRPG
Trigger: CCCGGGCCGCACGAGGGACAATAGGAGCCAGGCGCA...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CAA 90 bp AGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGCGCCTGGCTCCTATaGTCCCTCGTGCGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: SSSSSSRDSGSWTQAALCCAWLL*SLVRPG
Trigger: CCCGGGCCGCACGAGGGACAATAGGAGCCAGGCGCA...GCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CAA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGGGAAGGCGGCCAGCTaGTCCGTCTGGTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCGKAAS*SVWLLG
Trigger: CCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCC...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CAA 90 bp CAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGGCCCGCAGGCTCTCTTaGATCTGCGCCTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: QQQQQQQRFRELDAGSSVARRLS*ICALGA
Trigger: GGCCCCCAAGGCGCAGATCAAAGAGAGCCTGCGGGC...CACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS GCA 90 bp GCTGGCTGCGGTCCTCGGGGAAGGCGGCCAGCTTGTCCGTCTGGTTaGTGGGGCTCATGCGGTACCAGTTTAGCACGAAGCTCTCCGATG +
Preference number: 5 (lower is better)
Translates to: AGCGPRGRRPACPSG*WGSCGTSLARSSPM
Trigger: CATCGGAGAGCTTCGTGCTAAACTGGTACCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGGACCGCAGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS-3UTR CAA 90 bp CCATGTACCTCCCACTCCTGTGCCCAGTCTTGGGCCCTGCGTCCAGGGCGTTTCCAGGTGAAGGTGGCGTaGTCCCCTTCGGTCACCACG +
Preference number: 5 (lower is better)
Translates to: PCTSHSCAQSWALRPGRFQVKVA*SPSVTT
Trigger: CGTGGTGACCGAAGGGGACAACGCCACCTTCACCTG...GAAACGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAGTGGGAGGTACATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CAA 90 bp GGAGGGTCTGCAGAACACTGGTGGCCAAGGAAGCCGGTCAGAGGGGCCAAGAGCCAGGTGAAGGTGGCGTaGTCCCCTTCGGTCACCACG +
Preference number: 5 (lower is better)
Translates to: GGSAEHWWPRKPVRGAKSQVKVA*SPSVTT
Trigger: CGTGGTGACCGAAGGGGACAACGCCACCTTCACCTG...GCTCTTGGCCCCTCTGACCGGCTTCCTTGGCCACCAGTGTTCTGCAGACCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CAA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGGGAAGGCGGCCAGCTaGTCCGTCTGGTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVGKAAS*SVWLLG
Trigger: CCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCC...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CAA 90 bp CCTGGACGGCCTGCAATGGCCTGCACCCTGCCTGCTTCTCCTGAGGAAATGCGCTCTTTGATCTGCGCCTaGGGGGCCAGGGAGATGGCC +
Preference number: 5 (lower is better)
Translates to: PGRPAMACTLPASPEEMRSLICA*GAREMA
Trigger: GGCCATCTCCCTGGCCCCCAAGGCGCAGATCAAAGA...GCGCATTTCCTCAGGAGAAGCAGGCAGGGTGCAGGCCATTGCAGGCCGTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CAA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACATGCGCCTGGCTCCTATaGTCCCTCGTGCGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTCAWLL*SLVRPG
Trigger: CCCGGGCCGCACGAGGGACAATAGGAGCCAGGCGCA...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CAA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTCCTGTGCCCAGTCTaGGGCCCTGCGTCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTLLCPV*GPASRA
Trigger: CGCCCTGGACGCAGGGCCCAAGACTGGGCACAGGAG...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS CCA 90 bp GGCTGCGGTCCTCGGGGAAGGCGGCCAGCTTGTCCGTCTGGTTGCTaGGGCTCATGCGGTACCAGTTTAGCACGAAGCTCTCCGATGTGT +
Preference number: 5 (lower is better)
Translates to: GCGPRGRRPACPSGC*GSCGTSLARSSPMC
Trigger: ACACATCGGAGAGCTTCGTGCTAAACTGGTACCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGGACCGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS-3UTR CAA 90 bp GCAGCAGCAGCAGCAGCAGCAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTCAGGTGAAGGTGGCGTaGTCCCCTTCGGTCACCACG +
Preference number: 5 (lower is better)
Translates to: AAAAAAAEIQGAGRRQLCQVKVA*SPSVTT
Trigger: CGTGGTGACCGAAGGGGACAACGCCACCTTCACCTG...ACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTGCTGCTGCTGCTGCTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CAA 90 bp CCCTGCCTGCTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCAGCTTGTCCGTCTGGTaGCTGGGGCTCATGCGGTAC +
Preference number: 5 (lower is better)
Translates to: PCLLLLRKCADPGSWWRVSLSVW*LGLMRY
Trigger: GTACCGCATGAGCCCCAGCAACCAGACGGACAAGCT...GACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAGCAGGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CAA 90 bp CAGGCTGCCCAGCAGGCCGCCCACGACACCAACCACCAGGGTTTGGAACTGGCCGGCTCACTGTGGGCATaGAGACATGAGTCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: QAAQQAAHDTNHQGLELAGSLWA*RHESCG
Trigger: ACCACAGGACTCATGTCTCAATGCCCACAGTGAGCC...GGCCAGTTCCAAACCCTGGTGGTTGGTGTCGTGGGCGGCCTGCTGGGCAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CAA 90 bp CAGAGATTCAGGGAGCTGGACGCAGGCAGCTCTGTGCTGGCAGGACCTGAAGCACAGGTGAAGGTGGCGTaGTCCCCTTCGGTCACCACG +
Preference number: 5 (lower is better)
Translates to: QRFRELDAGSSVLAGPEAQVKVA*SPSVTT
Trigger: CGTGGTGACCGAAGGGGACAACGCCACCTTCACCTG...TGCTTCAGGTCCTGCCAGCACAGAGCTGCCTGCGTCCAGCTCCCTGAATCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CAA 90 bp ACCTGCTGCCTGGGCTCACTGTGGGCATTGAGACATGAGTCCTGTGGTGGGGCTACGCCCGTTGGGCAGTaGTGTGACACGGAAGCGGCA +
Preference number: 5 (lower is better)
Translates to: TCCLGSLWALRHESCGGATPVGQ*CDTEAA
Trigger: TGCCGCTTCCGTGTCACACAACTGCCCAACGGGCGT...AGCCCCACCACAGGACTCATGTCTCAATGCCCACAGTGAGCCCAGGCAGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CAA 90 bp TGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGCCAAGGAATGGAAGTCACGCCCGTaGGGCAGTTGTGTGACACGG +
Preference number: 5 (lower is better)
Translates to: CADPGSWWRVCRTLVAKEWKSRP*GSCVTR
Trigger: CCGTGTCACACAACTGCCCAACGGGCGTGACTTCCA...TTCCTTGGCCACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS GCA 90 bp CCTCGGGGAAGGCGGCCAGCTTGTCCGTCTGGTTGCTGGGGCTCATaGGGTACCAGTTTAGCACGAAGCTCTCCGATGTGTTGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: PRGRRPACPSGCWGS*GTSLARSSPMCWRS
Trigger: GCTTCTCCAACACATCGGAGAGCTTCGTGCTAAACTGGTACCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CAA 90 bp CCTGAAACTTCTCTAGGCCTGCAGGGAGCAGATAACTCCTGGGGAGTCCCCAGCACGCCCGTTGGGCAGTaGTGTGACACGGAAGCGGCA +
Preference number: 5 (lower is better)
Translates to: PETSLGLQGADNSWGVPSTPVGQ*CDTEAA
Trigger: TGCCGCTTCCGTGTCACACAACTGCCCAACGGGCGT...GCTGGGGACTCCCCAGGAGTTATCTGCTCCCTGCAGGCCTAGAGAAGTTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CAA 90 bp CCTGAAACTTCTCTAGGCCTGCAGGGAGCAGATAACTCCTGGGGAGTCCCCAGCTCTTTGATCTGCGCCTaGGGGGCCAGGGAGATGGCC +
Preference number: 5 (lower is better)
Translates to: PETSLGLQGADNSWGVPSSLICA*GAREMA
Trigger: GGCCATCTCCCTGGCCCCCAAGGCGCAGATCAAAGA...GCTGGGGACTCCCCAGGAGTTATCTGCTCCCTGCAGGCCTAGAGAAGTTTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS TCA 90 bp ACCAGTTTAGCACGAAGCTCTCCGATGTGTTGGAGAAGCTGCAGGTaGAGGTGGCGTTGTCCCCTTCGGTCACCACGAGCAGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: TSLARSSPMCWRSCR*RWRCPLRSPRAGLG
Trigger: CCCCAGCCCTGCTCGTGGTGACCGAAGGGGACAACGCCACCTTCACCTGCAGCTTCTCCAACACATCGGAGAGCTTCGTGCTAAACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS TCA 90 bp CTCAGTTTAGCACGAAGCTCTCCGATGTGTTGGAGAAGCTGCAGGTaGAGGTGGCGTTGTCCCCTTCGGTCACCACGAGCAGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LSLARSSPMCWRSCR*RWRCPLRSPRAGLG
Trigger: CCCCAGCCCTGCTCGTGGTGACCGAAGGGGACAACGCCACCTTCACCTGCAGCTTCTCCAACACATCGGAGAGCTTCGTGCTAAACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CAA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACAAGCTTGTCCGTCTGGTaGCTGGGGCTCATGCGGTAC +
Preference number: 5 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTSLSVW*LGLMRY
Trigger: GTACCGCATGAGCCCCAGCAACCAGACGGACAAGCT...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS-3UTR CAA 90 bp CCAAGGAAGCCGGTCAGAGGGGCCAAGAGCAGTGTCCATCCTCAGGCCTCAGTGGGCTCACTGTGGGCATaGAGACATGAGTCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: PRKPVRGAKSSVHPQASVGSLWA*RHESCG
Trigger: ACCACAGGACTCATGTCTCAATGCCCACAGTGAGCC...CACTGAGGCCTGAGGATGGACACTGCTCTTGGCCCCTCTGACCGGCTTCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS-3UTR CAA 90 bp CTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACACTGGTGGGCTCACTGTGGGCATaGAGACATGAGTCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: LRKCADPGSWWRVCRTLVGSLWA*RHESCG
Trigger: ACCACAGGACTCATGTCTCAATGCCCACAGTGAGCC...CACCAGTGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CAA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACAGGCTCACTGTGGGCATaGAGACATGAGTCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTGSLWA*RHESCG
Trigger: ACCACAGGACTCATGTCTCAATGCCCACAGTGAGCC...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS-3UTR CAA 90 bp CTTCTCCTGAGGAAATGCGCTGACCCGGGCTCATGGTGGAGGGTCTGCAGAACAAAGCTCTCCGATGTGTaGGAGAAGCTGCAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: LLLRKCADPGSWWRVCRTKLSDV*EKLQVK
Trigger: CTTCACCTGCAGCTTCTCCAACACATCGGAGAGCTT...TGTTCTGCAGACCCTCCACCATGAGCCCGGGTCAGCGCATTTCCTCAGGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS CAA 72 bp CCGGGCTGGCTGCGGTCCTCGGGGAAGGCGGCCAGCTaGTCCGTCTGGTTGCTGGGGCTCATGCGGTACCAG +
Preference number: 6 (lower is better)
Translates to: PGWLRSSGKAAS*SVWLLGLMRYQ
Trigger: CTGGTACCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGGACCGCAGCCAGCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS CAA 90 bp CCGGGCCCTGACCACGCTCATGTGGAAGTCACGCCCGTTGGGCAGTaGTGTGACACGGAAGCGGCAGTCCTGGCCGGGCTGGCTGCGGTC +
Preference number: 6 (lower is better)
Translates to: PGPDHAHVEVTPVGQ*CDTEAAVLAGLAAV
Trigger: GACCGCAGCCAGCCCGGCCAGGACTGCCGCTTCCGTGTCACACAACTGCCCAACGGGCGTGACTTCCACATGAGCGTGGTCAGGGCCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS GCA 72 bp ACCGCCCAGACGACTGGCCAGGGCGCCTGTGGGATCTaGATGCCTGGAGCAGCCCCACCAGAGTGCCGCCTT +
Preference number: 6 (lower is better)
Translates to: TAQTTGQGACGI*MPGAAPPECRL
Trigger: AAGGCGGCACTCTGGTGGGGCTGCTCCAGGCATGCAGATCCCACAGGCGCCCTGGCCAGTCGTCTGGGCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS CAA 90 bp CAGTCCTGGCCGGGCTGGCTGCGGTCCTCGGGGAAGGCGGCCAGCTaGTCCGTCTGGTTGCTGGGGCTCATGCGGTACCAGTTTAGCACG +
Preference number: 6 (lower is better)
Translates to: QSWPGWLRSSGKAAS*SVWLLGLMRYQFST
Trigger: CGTGCTAAACTGGTACCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGGACCGCAGCCAGCCCGGCCAGGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS CAA 90 bp TCATTGCGCCGGGCCCTGACCACGCTCATGTGGAAGTCACGCCCGTaGGGCAGTTGTGTGACACGGAAGCGGCAGTCCTGGCCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: SLRRALTTLMWKSRP*GSCVTRKRQSWPGW
Trigger: CCAGCCCGGCCAGGACTGCCGCTTCCGTGTCACACAACTGCCCAACGGGCGTGACTTCCACATGAGCGTGGTCAGGGCCCGGCGCAATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS TCA 72 bp CGCTCATGTGGAAGTCACGCCCGTTGGGCAGTTGTGTaGCACGGAAGCGGCAGTCCTGGCCGGGCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: RSCGSHARWAVV*HGSGSPGRAGC
Trigger: GCAGCCAGCCCGGCCAGGACTGCCGCTTCCGTGTCACACAACTGCCCAACGGGCGTGACTTCCACATGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS CAA 72 bp GTCCCTGTCACCCTGAGCTCTGCCCGCAGGCTCTCTTaGATCTGCGCCTTGGGGGCCAGGGAGATGGCCCCA +
Preference number: 6 (lower is better)
Translates to: VPVTLSSARRLS*ICALGAREMAP
Trigger: TGGGGCCATCTCCCTGGCCCCCAAGGCGCAGATCAAAGAGAGCCTGCGGGCAGAGCTCAGGGTGACAGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343705.3
ENST00000630230.1
CDS TCA 72 bp CACAGAGGTAGGTGCCGCTGTCATTGCGCCGGGCCCTaGCCACGCTCATGTGGAAGTCACGCCCGTTGGGCA +
Preference number: 6 (lower is better)
Translates to: HRGRCRCHCAGP*PRSCGSHARWA
Trigger: TGCCCAACGGGCGTGACTTCCACATGAGCGTGGTCAGGGCCCGGCGCAATGACAGCGGCACCTACCTCTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS CCA 72 bp CTGCGGTCCTCGGGGAAGGCGGCCAGCTTGTCCGTCTaGTTGCTGGGGCTCATGCGGTACCAGTTTAGCACG +
Preference number: 6 (lower is better)
Translates to: LRSSGKAASLSV*LLGLMRYQFST
Trigger: CGTGCTAAACTGGTACCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGGACCGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS CCA 72 bp CCGCTGTCATTGCGCCGGGCCCTGACCACGCTCATGTaGAAGTCACGCCCGTTGGGCAGTTGTGTGACACGG +
Preference number: 6 (lower is better)
Translates to: PLSLRRALTTLM*KSRPLGSCVTR
Trigger: CCGTGTCACACAACTGCCCAACGGGCGTGACTTCCACATGAGCGTGGTCAGGGCCCGGCGCAATGACAGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS CAA 72 bp GACCACGCTCATGTGGAAGTCACGCCCGTTGGGCAGTaGTGTGACACGGAAGCGGCAGTCCTGGCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: DHAHVEVTPVGQ*CDTEAAVLAGL
Trigger: CAGCCCGGCCAGGACTGCCGCTTCCGTGTCACACAACTGCCCAACGGGCGTGACTTCCACATGAGCGTGGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS CAA 72 bp CGGGCCCTGACCACGCTCATGTGGAAGTCACGCCCGTaGGGCAGTTGTGTGACACGGAAGCGGCAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: RALTTLMWKSRP*GSCVTRKRQSW
Trigger: CCAGGACTGCCGCTTCCGTGTCACACAACTGCCCAACGGGCGTGACTTCCACATGAGCGTGGTCAGGGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS CAA 90 bp GGCTGGCTGCGGTCCTCGGGGAAGGCGGCCAGCTTGTCCGTCTGGTaGCTGGGGCTCATGCGGTACCAGTTTAGCACGAAGCTCTCCGAT +
Preference number: 6 (lower is better)
Translates to: GWLRSSGKAASLSVW*LGLMRYQFSTKLSD
Trigger: ATCGGAGAGCTTCGTGCTAAACTGGTACCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGGACCGCAGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS GCA 72 bp GGTCCTCGGGGAAGGCGGCCAGCTTGTCCGTCTGGTTaGTGGGGCTCATGCGGTACCAGTTTAGCACGAAGC +
Preference number: 6 (lower is better)
Translates to: GPRGRRPACPSG*WGSCGTSLARS
Trigger: GCTTCGTGCTAAACTGGTACCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS CAA 72 bp CGGTCCTCGGGGAAGGCGGCCAGCTTGTCCGTCTGGTaGCTGGGGCTCATGCGGTACCAGTTTAGCACGAAG +
Preference number: 6 (lower is better)
Translates to: RSSGKAASLSVW*LGLMRYQFSTK
Trigger: CTTCGTGCTAAACTGGTACCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS CAA 90 bp ACGAAGCTCTCCGATGTGTTGGAGAAGCTGCAGGTGAAGGTGGCGTaGTCCCCTTCGGTCACCACGAGCAGGGCTGGGGAGAAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: TKLSDVLEKLQVKVA*SPSVTTSRAGEKVG
Trigger: CCCCACCTTCTCCCCAGCCCTGCTCGTGGTGACCGAAGGGGACAACGCCACCTTCACCTGCAGCTTCTCCAACACATCGGAGAGCTTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000418831.1
ENST00000618185.3
ENST00000630560.1
CDS CCA 72 bp CCTCGGGGAAGGCGGCCAGCTTGTCCGTCTGGTTGCTaGGGCTCATGCGGTACCAGTTTAGCACGAAGCTCT +
Preference number: 6 (lower is better)
Translates to: PRGRRPACPSGC*GSCGTSLARSS
Trigger: AGAGCTTCGTGCTAAACTGGTACCGCATGAGCCCCAGCAACCAGACGGACAAGCTGGCCGCCTTCCCCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334409.10
ENST00000343705.3
ENST00000618185.3
ENST00000630230.1
CDS CAA 90 bp CTGGGGCTCATGCGGTACCAGTTTAGCACGAAGCTCTCCGATGTGTaGGAGAAGCTGCAGGTGAAGGTGGCGTTGTCCCCTTCGGTCACC +
Preference number: 6 (lower is better)
Translates to: LGLMRYQFSTKLSDV*EKLQVKVALSPSVT
Trigger: GGTGACCGAAGGGGACAACGCCACCTTCACCTGCAGCTTCTCCAACACATCGGAGAGCTTCGTGCTAAACTGGTACCGCATGAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS CAA 90 bp GCACTTCTGCCCTTCTCTCAGTTTAGCACGAAGCTCTCCGATGTGTaGGAGAAGCTGCAGGTGAAGGTGGCGTTGTCCCCTTCGGTCACC +
Preference number: 6 (lower is better)
Translates to: ALLPFSQFSTKLSDV*EKLQVKVALSPSVT
Trigger: GGTGACCGAAGGGGACAACGCCACCTTCACCTGCAGCTTCTCCAACACATCGGAGAGCTTCGTGCTAAACTGAGAGAAGGGCAGAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1
CDS CAA 72 bp ATGCGGTACCAGTTTAGCACGAAGCTCTCCGATGTGTaGGAGAAGCTGCAGGTGAAGGTGGCGTTGTCCCCT +
Preference number: 6 (lower is better)
Translates to: MRYQFSTKLSDV*EKLQVKVALSP
Trigger: AGGGGACAACGCCACCTTCACCTGCAGCTTCTCCAACACATCGGAGAGCTTCGTGCTAAACTGGTACCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334409.10
ENST00000618185.3
CDS CAA 72 bp CCCTTCTCTCAGTTTAGCACGAAGCTCTCCGATGTGTaGGAGAAGCTGCAGGTGAAGGTGGCGTTGTCCCCT +
Preference number: 6 (lower is better)
Translates to: PFSQFSTKLSDV*EKLQVKVALSP
Trigger: AGGGGACAACGCCACCTTCACCTGCAGCTTCTCCAACACATCGGAGAGCTTCGTGCTAAACTGAGAGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418831.1
ENST00000630560.1