RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000100889

Ensembl transcript IDs: ENST00000216780.9, ENST00000396973.8, ENST00000545054.6, ENST00000557969.1, ENST00000558096.5, ENST00000558674.5, ENST00000559250.5, ENST00000559503.1, ENST00000559584.5, ENST00000559837.5, ENST00000560106.5, ENST00000560657.1, ENST00000560736.5, ENST00000561050.5, ENST00000561286.5, ENST00000642552.1, ENST00000642758.1, ENST00000642858.1, ENST00000643521.1, ENST00000644361.1, ENST00000644466.1, ENST00000644626.1, ENST00000644679.1, ENST00000644897.1, ENST00000645217.2, ENST00000645466.1, ENST00000645536.1, ENST00000645709.1, ENST00000646542.1, ENST00000647090.1

Found 1368 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCTCTCATCCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTTaGCCAGCTGCCCACGGGCCCCACCAGGCGGGAGTGGTACCGTGT +
Preference number: 1 (lower is better)
Translates to: TSHPQLAGNQLGTSS*PAAHGPHQAGVVPC
Trigger: ACACGGTACCACTCCCGCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR CCA 90 bp GTGCGGCCCTGCATGCAGCCTGGAAACCTCTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATCCAGTTGCCCAGCTGCCCACGGGCC +
Preference number: 1 (lower is better)
Translates to: VRPCMQPGNLSSTAR*KSAGDIQLPSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGCCGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR CCA 90 bp CCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGCCAGCCCAAGGGGCTCAGCCCATGC +
Preference number: 1 (lower is better)
Translates to: PVGSWPRSPLSTRRV*MLRHDGQPKGLSPC
Trigger: GCATGGGCTGAGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR TCA 90 bp GCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATaGTGGCCAGCCCAAGGGGCTCAGCCCATGCCAGTTAAGCCTGGG +
Preference number: 1 (lower is better)
Translates to: AQISTKHSQGLDATA*WPAQGAQPMPVKPG
Trigger: CCCAGGCTTAACTGGCATGGGCTGAGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR GCA 90 bp GGAGTGGTACCGTGTCCCGCTGAGAAGGAGTTACAATCACCGTCTTaGTCTCTACTCGTGCCACATCCTTGGGGTCTGTGCGGGCCAGCC +
Preference number: 1 (lower is better)
Translates to: GVVPCPAEKELQSPS*SLLVPHPWGLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAACTCCTTCTCAGCGGGACACGGTACCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR CCA 90 bp GGTTTGCCCAGCCAGGAGGTCACAGTAACACCAGGTGGAAGAGGCTaGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCC +
Preference number: 1 (lower is better)
Translates to: GLPSQEVTVTPGGRG*SMPSQYTPPSLVSA
Trigger: GGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTGACCTCCTGGCTGGGCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR TCA 90 bp AGGACAGCCTCTCTCTCCCTGGAGCCTGGCTCACGTTATCTCTTGTaGAGCCCCCACACCCTCTTGCAGCCCTCTAAGTGGGACGTTTCC +
Preference number: 1 (lower is better)
Translates to: RTASLSLEPGSRYLL*SPHTLLQPSKWDVS
Trigger: GGAAACGTCCCACTTAGAGGGCTGCAAGAGGGTGTGGGGGCTTCACAAGAGATAACGTGAGCCAGGCTCCAGGGAGAGAGAGGCTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR CCA 90 bp AGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTAACACCAGGTaGAAGAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCACT +
Preference number: 1 (lower is better)
Translates to: RFPGFAQPGGHSNTR*KRLVNALPVHATIT
Trigger: AGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR CCA 90 bp AGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGAAGCTaGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTACGG +
Preference number: 1 (lower is better)
Translates to: RRALCSTKSRMPVGS*PRSPLSTRRVWMLR
Trigger: CCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR GCA 90 bp CCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTaGTCTACAAAATCTCGAATGCCAGTGGGAAGCTGGCCCAGATCT +
Preference number: 1 (lower is better)
Translates to: PSQMWMPSGWHRRAL*STKSRMPVGSWPRS
Trigger: AGATCTGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR GCA 90 bp GCCAGCCAGCAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCAGCCTCAGTT +
Preference number: 1 (lower is better)
Translates to: ASQQLLYLGSFRMRP*CSSRVSVAVFSASV
Trigger: AACTGAGGCTGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR CCA 90 bp TTTCAAGCACACAGTCTTGAGGACAGCCTCTCTCTCCCTGGAGCCTaGCTCACGTTATCTCTTGTGAAGCCCCCACACCCTCTTGCAGCC +
Preference number: 1 (lower is better)
Translates to: FQAHSLEDSLSLPGA*LTLSLVKPPHPLAA
Trigger: GGCTGCAAGAGGGTGTGGGGGCTTCACAAGAGATAACGTGAGCCAGGCTCCAGGGAGAGAGAGGCTGTCCTCAAGACTGTGTGCTTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR CCA 90 bp AGGGTCAGTGTGGCAGTATTCTCAGCCTCAGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAA +
Preference number: 1 (lower is better)
Translates to: RVSVAVFSASVPSQM*MPSGWHRRALCSTK
Trigger: TTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAACTGAGGCTGAGAATACTGCCACACTGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR GCA 90 bp TTGAAGATGTTAGTTAATATCAAATTGCTCATATTTTCTGCAAGGTaGCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGA +
Preference number: 1 (lower is better)
Translates to: LKMLVNIKLLIFSAR*LPYSQMRVLCPLAR
Trigger: TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATTAACTAACATCTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
3UTR-3UTR GCA 90 bp GCTGCCCACGGGCCCCACCAGGCGGGAGTGGTACCGTGTCCCGCTGAGAAGGAGCGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 2 (lower is better)
Translates to: AAHGPHQAGVVPCPAEKERMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...CTCCTTCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGGGCCCGTGGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR CCA 90 bp GCTGCCCACGGGCCCCACCAGGCGGGAGTGGTACCGTGTCCCGCTGAGAAGGAGTGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 2 (lower is better)
Translates to: AAHGPHQAGVVPCPAEKEWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...CTCCTTCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGGGCCCGTGGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR CAA 90 bp AACCTCTCATCCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCCCCACCAGGCGGGAGTGGTACCGTG +
Preference number: 2 (lower is better)
Translates to: NLSSTARWKSAGDIQ*PSCPRAPPGGSGTV
Trigger: CACGGTACCACTCCCGCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGAGAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR GCA 90 bp GCTGCCCACGGGCCCCACCAGGCGGGAGTGGTACCGTGTCCCGCTGAGAAGGAGCACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 2 (lower is better)
Translates to: AAHGPHQAGVVPCPAEKEHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...CTCCTTCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGGGCCCGTGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR TCA 90 bp TACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCATGGGGAGCTTTCGGATaGGGCCCTGCTGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: YLGSFRMRPCCSSRVSVAWGAFG*GPAAPA
Trigger: TGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCA...TGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR GCA 90 bp GAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCAGCCTCAGTTCCCGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 2 (lower is better)
Translates to: EALLLQQGQCGSILSLSSRMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...GGAACTGAGGCTGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CCA 90 bp GTGCGGGCCAGCCAGCAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 2 (lower is better)
Translates to: VRASQQLLYLGSFRMRPCWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...GCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGCCCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CCA 90 bp GAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCAGCCTCAGTTCCGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACT +
Preference number: 2 (lower is better)
Translates to: EALLLQQGQCGSILSLSSDVDAL*LAQAGT
Trigger: AGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC...GGAACTGAGGCTGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CCA 90 bp AGGCGGGAGTGGTACCGTGTCCCGCTGAGAAGGAGTTACAATCACCGTCTTGCTCTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: RREWYRVPLRRSYNHRLALVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...AGCAAGACGGTGATTGTAACTCCTTCTCAGCGGGACACGGTACCACTCCCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR TCA 90 bp CAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTAAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 2 (lower is better)
Translates to: QGSLSPGFQGLPSQEVTVSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...TACTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR TCA 90 bp CTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTACCAGGGGCAAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 2 (lower is better)
Translates to: LWIVAMALGLVVAEVPGASRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...TGCCCCTGGTACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR GCA 90 bp CACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGGAAGAGGCTGGTCAATaGCCTCCCAGTACACGCCAC +
Preference number: 2 (lower is better)
Translates to: HRAPCHQVSRVCPARRSQEEAGQ*PPSTRH
Trigger: GTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTC...CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR GCA 90 bp GAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCAGCCTCAGTTCCTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 2 (lower is better)
Translates to: EALLLQQGQCGSILSLSSFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...GGAACTGAGGCTGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CCA 90 bp GCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATTGGTGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 2 (lower is better)
Translates to: AGQCPPSTRHHHWSQPHWWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...CCAATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR CCA 90 bp TTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACT +
Preference number: 2 (lower is better)
Translates to: LYLGSFRMRPCCSSRVSVDVDAL*LAQAGT
Trigger: AGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC...CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR TCA 90 bp TCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATGGGGAGCTTTCGGATaGGGCCCTGCTGCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: SQMWMPSGWHRRALCSTKWGAFG*GPAAPA
Trigger: TGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCA...TTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR GCA 90 bp GCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATTGGATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAG +
Preference number: 2 (lower is better)
Translates to: AGQCPPSTRHHHWSQPHWIALLP*RAGDAQ
Trigger: CTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTAT...CCAATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR GCA 90 bp GCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATTGGTTTCCAGCCTGGCAGTaGAGGCCGCATCATAGCCAG +
Preference number: 2 (lower is better)
Translates to: AGQCPPSTRHHHWSQPHWFPAWQ*RPHHSQ
Trigger: CTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAA...CCAATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR GCA 90 bp CTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGCTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 2 (lower is better)
Translates to: LWLAQAGTVLYKISNASGLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...CCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR GCA 90 bp TTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 2 (lower is better)
Translates to: FHHRCGCPLVGTGGHCALLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...TAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR GCA 90 bp CCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTTGCCCAGCTGCCCACGGGCACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 2 (lower is better)
Translates to: PQLAGNQLGTSSCPAAHGHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...CCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR GCA 90 bp CACCAGGCGGGAGTGGTACCGTGTCCCGCTGAGAAGGAGTTACAATCACCGTCTCATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 2 (lower is better)
Translates to: HQAGVVPCPAEKELQSPSHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...AGACGGTGATTGTAACTCCTTCTCAGCGGGACACGGTACCACTCCCGCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR GCA 90 bp CTCTCATCCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTTGCCCAGCTGCCATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 2 (lower is better)
Translates to: LSSTARWKSAGDIQLPSCHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...GCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR GCA 90 bp CCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTAAAGGGGCTCAGCCCATaGCAGTTAAGCCTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: PVGSWPRSPLSTRRVWMLKGLSP*QLSLGL
Trigger: CAGACCCAGGCTTAACTGGCATGGGCTGAGCCCCTT...TAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR-3UTR CCA 90 bp GAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATCCATGGCGTTGGGATTaGTGGTGGCAGAGGTACCAG +
Preference number: 2 (lower is better)
Translates to: EAGQCPPSTRHHHWSQPHPWRWD*WWQRYQ
Trigger: CTGGTACCTCTGCCACCACCAATCCCAACGCCATGG...ATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR CCA 90 bp CCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 2 (lower is better)
Translates to: PSQMWMPSGWHRRALCSTSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...TGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CCA 90 bp TCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 2 (lower is better)
Translates to: SQMWMPSGWHRRALCSTKWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...TTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CCA 90 bp CTAAGCACTCGCAGGGTCTGGATGCTACGGCATGATGGCCAGCCCAAGGGGCTCTCTCTCCCTGGAGCCTaGCTCACGTTATCTCTTGTG +
Preference number: 2 (lower is better)
Translates to: LSTRRVWMLRHDGQPKGLSLPGA*LTLSLV
Trigger: CACAAGAGATAACGTGAGCCAGGCTCCAGGGAGAGA...GAGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR-3UTR TCA 90 bp GTGCGGGCCAGCCAGCAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTCACGTTATCTCTTGTaGAGCCCCCACACCCTCTTG +
Preference number: 2 (lower is better)
Translates to: VRASQQLLYLGSFRMRPCSRYLL*SPHTLL
Trigger: CAAGAGGGTGTGGGGGCTTCACAAGAGATAACGTGA...GCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGCCCGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR-3UTR GCA 90 bp CAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 2 (lower is better)
Translates to: QLLYLGSFRMRPCCSSRVFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...GACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR GCA 90 bp GAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCAGCCTCAGTTCCCTTGCTCTCTACTCGTaGCACATCCTTGGGGTCTGT +
Preference number: 2 (lower is better)
Translates to: EALLLQQGQCGSILSLSSLALYS*HILGVC
Trigger: ACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAG...GGAACTGAGGCTGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR CCA 90 bp GATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 2 (lower is better)
Translates to: DVDALWLAQAGTVLYKISSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...CGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CCA 90 bp GGAAACCTCTCATCCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTTGCCCAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 2 (lower is better)
Translates to: GNLSSTARWKSAGDIQLPSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...GGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGAGAGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR CCA 90 bp ATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 2 (lower is better)
Translates to: IVLGELSDEALLLQQGQCSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...ACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CCA 90 bp CAGGCGGGAGTGGTACCGTGTCCCGCTGAGAAGGAGTTACAATCACCGTCTTGCCCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: QAGVVPCPAEKELQSPSCPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...GCAAGACGGTGATTGTAACTCCTTCTCAGCGGGACACGGTACCACTCCCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR TCA 90 bp GCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAATGGGCAGATCCTGGTTaGCCTGCTCTGTCAGGTAGC +
Preference number: 2 (lower is better)
Translates to: ARLGPQVTFCAHVSPGPQWADPG*PALSGS
Trigger: GCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCA...TTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
3UTR-3UTR TCA 90 bp CCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACATGGGCAGATCCTGGTTaGCCTGCTCTGTCAGGTAGC +
Preference number: 2 (lower is better)
Translates to: PQVTFCAHVSPGPQAQPTWADPG*PALSGS
Trigger: GCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCA...TGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
3UTR-3UTR TCA 90 bp ACCTCTCATCCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTTGCCCAGCTGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACC +
Preference number: 2 (lower is better)
Translates to: TSHPQLAGNQLGTSSCPAGTVSR*EGVTIT
Trigger: GGTGATTGTAACTCCTTCTCAGCGGGACACGGTACC...AGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR TCA 90 bp TTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTAGAGGGAAGTTCTCCGTaGGCATCAGTTTTCAAGCAC +
Preference number: 2 (lower is better)
Translates to: LGSFRMRPCCSSRVSVAVEGSSP*ASVFKH
Trigger: GTGCTTGAAAACTGATGCTCACGGAGAACTTCCCTC...TACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR-3UTR GCA 90 bp AGCCTGGGTCTGTTCCTGCCTCAGAGGGAAGTTCTCCGTGAGCATCAGTTTTCACTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SLGLFLPQREVLREHQFSLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...TGAAAACTGATGCTCACGGAGAACTTCCCTCTGAGGCAGGAACAGACCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR-3UTR CCA 90 bp CTCTCATCCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTTGCCCAGCTGCAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 2 (lower is better)
Translates to: LSSTARWKSAGDIQLPSCNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...GCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR CCA 90 bp CAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCCCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: QLLYLGSFRMRPCCSSRVPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...GACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CCA 90 bp GGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGAAGCCCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: GWHRRALCSTKSRMPVGSPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...GCTTCCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR GCA 90 bp GCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCATCCCCCACAACTAGGGAAGGCGGCTaGCACATAGCGCTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: ARSRPSLSNLIQAISSPTTREGG*HIALLP
Trigger: GGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT...TGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR CCA 90 bp GCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACTCTTTGGGCAGATCCTaGTTGACCTGCTCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: ASGHILCTRLSRASSSANSLGRS*LTCSVR
Trigger: CCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGA...GTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
3UTR-3UTR CCA 90 bp GCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCATCCCCCACACTCCACTTTCCAGCCTaGCAGTGCAGGCCGCATCAT +
Preference number: 2 (lower is better)
Translates to: ARSRPSLSNLIQAISSPTLHFPA*QCRPHH
Trigger: ATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAG...TGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR CCA 90 bp TTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTAAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 2 (lower is better)
Translates to: FHHRCGCPLVGTGGHCALNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...TAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CCA 90 bp GATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 2 (lower is better)
Translates to: DVDALWLAQAGTVLYKISNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...CGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CCA 90 bp CAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: QLLYLGSFRMRPCCSSRVVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...GACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR GCA 90 bp AATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATCTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: NASGKLAQISTKHSQGLDLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...ATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CCA 90 bp TCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACCTCTTTGGGCAGATCCTaGTTGACCTGCTCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: SGHILCTRLSRASSSANTSLGRS*LTCSVR
Trigger: CCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGA...GGTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
3UTR-3UTR CCA 90 bp TGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAAGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: CGCPLVGTGGHCALQNLEVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...TTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR GCA 90 bp TCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAACTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: SQMWMPSGWHRRALCSTKLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...TTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR GCA 90 bp TTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTCACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 2 (lower is better)
Translates to: LLYLGSFRMRPCCSSRVSHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR GCA 90 bp AAAATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAG +
Preference number: 2 (lower is better)
Translates to: KIVLLWIVAMALGLVVAEIALLP*RAGDAQ
Trigger: CTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTAT...CTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAGTAACACTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR GCA 90 bp AAAATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGACTAGGGAAGGCGGCTaGCACATAGCGCTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: KIVLLWIVAMALGLVVAETREGG*HIALLP
Trigger: GGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT...CTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAGTAACACTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR GCA 90 bp AAAATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGTTTCCAGCCTGGCAGTaGAGGCCGCATCATAGCCAG +
Preference number: 2 (lower is better)
Translates to: KIVLLWIVAMALGLVVAEFPAWQ*RPHHSQ
Trigger: CTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAA...CTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAGTAACACTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR CCA 90 bp ACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTAAAATAGTGTTACTCTaGATTGTAGCCATGGCGTTG +
Preference number: 2 (lower is better)
Translates to: TGLLVTRFPGFAQPGGHSKIVLL*IVAMAL
Trigger: CAACGCCATGGCTACAATCCAGAGTAACACTATTTT...ACTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR CAA 90 bp TCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGA +
Preference number: 2 (lower is better)
Translates to: SMPSQYTPPSLVSAT*VKIVLLWIVAMALG
Trigger: TCCCAACGCCATGGCTACAATCCAGAGTAACACTATTTTTACCAATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR TCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCAACTGCAAACGTTCATaGCTTCTGTGCCTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSNCKRS*LLCLLA
Trigger: TGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTT...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
3UTR-3UTR GCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCATGAACTGAGATTTTaGCTGGGACTGGAAACTGCA +
Preference number: 2 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSHELRF*LGLETA
Trigger: TGCAGTTTCCAGTCCCAGGCAAAATCTCAGTTCATG...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
3UTR-3UTR CCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCAGATTTTGCCTGGGACTaGAAACTGCAAACGTTCATG +
Preference number: 2 (lower is better)
Translates to: MWKLKLREVEQLSQITKPDFAWD*KLQTFM
Trigger: CATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
3UTR GCA 72 bp CGCTGGAAATCAGCTGGGGACATCCAGTTGCCCAGCTaGCCACGGGCCCCACCAGGCGGGAGTGGTACCGTG +
Preference number: 3 (lower is better)
Translates to: RWKSAGDIQLPS*PRAPPGGSGTV
Trigger: CACGGTACCACTCCCGCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR GCA 72 bp CCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTTaGCCAGCTGCCCACGGGCCCCACCAGGCGGGAGTG +
Preference number: 3 (lower is better)
Translates to: PQLAGNQLGTSS*PAAHGPHQAGV
Trigger: CACTCCCGCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR CCA 72 bp GTTGCCCAGCTGCCCACGGGCCCCACCAGGCGGGAGTaGTACCGTGTCCCGCTGAGAAGGAGTTACAATCAC +
Preference number: 3 (lower is better)
Translates to: VAQLPTGPTRRE*YRVPLRRSYNH
Trigger: GTGATTGTAACTCCTTCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGGGCCCGTGGGCAGCTGGGCAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR CAA 90 bp GTTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTGTGGATGCCCTCTGGTaGGCACAGGCGGGCACTGTG +
Preference number: 3 (lower is better)
Translates to: VPSQMWMPSGWHRRALCSVDALW*AQAGTV
Trigger: CACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCAC...AGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR CCA 72 bp TGGAAACCTCTCATCCACAGCTCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAGCTGCCCACGGGCCCC +
Preference number: 3 (lower is better)
Translates to: WKPLIHSSLEIS*GHPVAQLPTGP
Trigger: GGGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGAGAGGTTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR CCA 72 bp AGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGCCAGCCCAAGGGGCTC +
Preference number: 3 (lower is better)
Translates to: SWPRSPLSTRRV*MLRHDGQPKGL
Trigger: GAGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR TCA 72 bp CGGGCCCCACCAGGCGGGAGTGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACCGTCTTGCTCTCTACT +
Preference number: 3 (lower is better)
Translates to: RAPPGGSGTVSR*EGVTITVLLST
Trigger: AGTAGAGAGCAAGACGGTGATTGTAACTCCTTCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGGGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR TCA 72 bp TCCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATaGTGGCCAGCCCAAGGGGCTCAGCCCATGCCAGTT +
Preference number: 3 (lower is better)
Translates to: STKHSQGLDATA*WPAQGAQPMPV
Trigger: AACTGGCATGGGCTGAGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR-3UTR CAA 90 bp GCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATTGGGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCA +
Preference number: 3 (lower is better)
Translates to: AGQCPPSTRHHHWSQPHWAMALG*VVAEVP
Trigger: TGGTACCTCTGCCACCACCAATCCCAACGCCATGGC...CCAATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR CAA 90 bp ATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGATGCCCTCTGGTaGGCACAGGCGGGCACTGTG +
Preference number: 3 (lower is better)
Translates to: MPSGWHRRALCSTKSRMPVDALW*AQAGTV
Trigger: CACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCAC...TGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CAA 90 bp TTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGAAGCTGGTGGATGCCCTCTGGTaGGCACAGGCGGGCACTGTG +
Preference number: 3 (lower is better)
Translates to: LAQAGTVLYKISNASGKLVDALW*AQAGTV
Trigger: CACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCAC...CAGCTTCCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CAA 90 bp AGTAACACCAGGTGGAAGAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 3 (lower is better)
Translates to: SNTRWKRLVNALPVHATIKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...GATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGGTGTTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR CAA 90 bp ATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAAGCCCCCACACCCTCTaGCAGCCCTCTAAGTGGGAC +
Preference number: 3 (lower is better)
Translates to: MPSGWHRRALCSTKSRMPSPHTL*QPSKWD
Trigger: GTCCCACTTAGAGGGCTGCAAGAGGGTGTGGGGGCT...TGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR-3UTR CAA 90 bp CTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTACCAGGGGCAATAGCCAGGTTGGTCTaGCCACAGGCACTAGGGAAG +
Preference number: 3 (lower is better)
Translates to: LWIVAMALGLVVAEVPGAIARLV*PQALGK
Trigger: CTTCCCTAGTGCCTGTGGCAAGACCAACCTGGCTAT...TGCCCCTGGTACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR CAA 90 bp ACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTCGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 3 (lower is better)
Translates to: TGLLVTRFPGFAQPGGHSRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...ACTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR CAA 90 bp CTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTACCAGGGGCACGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 3 (lower is better)
Translates to: LWIVAMALGLVVAEVPGARIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...TGCCCCTGGTACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR TCA 72 bp TCTCTCTCCCTGGAGCCTGGCTCACGTTATCTCTTGTaGAGCCCCCACACCCTCTTGCAGCCCTCTAAGTGG +
Preference number: 3 (lower is better)
Translates to: SLSLEPGSRYLL*SPHTLLQPSKW
Trigger: CCACTTAGAGGGCTGCAAGAGGGTGTGGGGGCTTCACAAGAGATAACGTGAGCCAGGCTCCAGGGAGAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR GCA 72 bp CTGGCGAGCCGGGGCACAAAATCGAGAGTTGGGATGTaGACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTT +
Preference number: 3 (lower is better)
Translates to: LASRGTKSRVGM*TGLLVTRFPGF
Trigger: AAACCCTGGAAACCTGGTGACAAGGAGCCCTGTGCACATCCCAACTCTCGATTTTGTGCCCCGGCTCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR CCA 72 bp CACAGTCTTGAGGACAGCCTCTCTCTCCCTGGAGCCTaGCTCACGTTATCTCTTGTGAAGCCCCCACACCCT +
Preference number: 3 (lower is better)
Translates to: HSLEDSLSLPGA*LTLSLVKPPHP
Trigger: AGGGTGTGGGGGCTTCACAAGAGATAACGTGAGCCAGGCTCCAGGGAGAGAGAGGCTGTCCTCAAGACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR-3UTR CAA 90 bp AGTAACACCAGGTGGAAGAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCATTGTAGCCATGGCGTaGGGATTGGTGGTGGCAGAG +
Preference number: 3 (lower is better)
Translates to: SNTRWKRLVNALPVHATIIVAMA*GLVVAE
Trigger: CTCTGCCACCACCAATCCCAACGCCATGGCTACAAT...GATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGGTGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR-3UTR CAA 90 bp TGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 3 (lower is better)
Translates to: CPLVGTGGHCALQNLECQASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...CTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR TCA 72 bp TACCAGGGGCAACCCCAAAGAAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTTCACTGTCAAACCTCA +
Preference number: 3 (lower is better)
Translates to: YQGQPQRSRSQG*WPGVDLHCQTS
Trigger: TGAGGTTTGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGTTGCCCCTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
3UTR GCA 72 bp CCGTGTCCCGCTGAGAAGGAGTTACAATCACCGTCTTaGTCTCTACTCGTGCCACATCCTTGGGGTCTGTGC +
Preference number: 3 (lower is better)
Translates to: PCPAEKELQSPS*SLLVPHPWGLC
Trigger: GCACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAACTCCTTCTCAGCGGGACACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
3UTR-3UTR CAA 90 bp GCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAATCAGCCAACACCTCTTaGGGCAGATCCTGGTTGACC +
Preference number: 3 (lower is better)
Translates to: ARLGPQVTFCAHVSPGPQSANTS*GRSWLT
Trigger: GGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGA...TTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
3UTR TCA 72 bp GTTCTCCGTGAGCATCAGTTTTCAAGCACACAGTCTTaGGGACAGCCTCTCTCTCCCTGGAGCCTGGCTCAC +
Preference number: 3 (lower is better)
Translates to: VLREHQFSSTQS*GQPLSPWSLAH
Trigger: GTGAGCCAGGCTCCAGGGAGAGAGAGGCTGTCCTCAAGACTGTGTGCTTGAAAACTGATGCTCACGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR CCA 72 bp CTGTGCTCTACAAAATCTCGAATGCCAGTGGGAAGCTaGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: LCSTKSRMPVGS*PRSPLSTRRVW
Trigger: CCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAGAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR CCA 72 bp GCCTCAGTTCCATCACAGATGTGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGCTCTACAAAATCTCGA +
Preference number: 3 (lower is better)
Translates to: ASVPSQMWMPSG*HRRALCSTKSR
Trigger: TCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAACTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR CCA 72 bp CTCAGCCTCAGTTCCATCACAGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACTGTGCTCTACAAAATC +
Preference number: 3 (lower is better)
Translates to: LSLSSITDVDAL*LAQAGTVLYKI
Trigger: GATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAACTGAGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR GCA 72 bp CAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCA +
Preference number: 3 (lower is better)
Translates to: QLLYLGSFRMRP*CSSRVSVAVFS
Trigger: TGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR-3UTR CAA 90 bp TGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAACAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 3 (lower is better)
Translates to: CGCPLVGTGGHCALQNLEQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...TTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
3UTR TCA 72 bp CCTGGGTCTGTTCCTGCCTCAGAGGGAAGTTCTCCGTaGGCATCAGTTTTCAAGCACACAGTCTTGAGGACA +
Preference number: 3 (lower is better)
Translates to: PGSVPASEGSSP*ASVFKHTVLRT
Trigger: TGTCCTCAAGACTGTGTGCTTGAAAACTGATGCTCACGGAGAACTTCCCTCTGAGGCAGGAACAGACCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR TCA 72 bp CACAAAACCAGTGACTGGTGGAGTTGGGACATGAACTaGGATTTTGCCTGGGACTGGAAACTGCAAACGTTC +
Preference number: 3 (lower is better)
Translates to: HKTSDWWSWDMN*DFAWDWKLQTF
Trigger: GAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAGTTCATGTCCCAACTCCACCAGTCACTGGTTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
3UTR TCA 72 bp CCTTTTTATGCACTATTTAATCCTCCAACAATCTCATaGGATAGGTACTATCACAACTACCCTCATTCAACT +
Preference number: 3 (lower is better)
Translates to: PFYALFNPPTIS*DRYYHNYPHST
Trigger: AGTTGAATGAGGGTAGTTGTGATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp GCTGCCCACGGGCCCCACCAGGCGGGAGTGGTACCGTGTCCCGCTGAGAAGGAGTTGTCCCCAGGGCCCTaGTGCCTCTCGAAGTACCCT +
Preference number: 4 (lower is better)
Translates to: AAHGPHQAGVVPCPAEKELSPGP*CLSKYP
Trigger: AGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGACAA...CTCCTTCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGGGCCCGTGGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR TCA 90 bp CTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTCCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: LGELSDEALLLQQGQCGSPWGAG*EPVRGP
Trigger: CGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGG...ACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp CCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTTGCCCAGCTGCCCACGGGCTGGGGACATCCAGTTaGCCAGCTGCCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: PQLAGNQLGTSSCPAAHGLGTSS*PAAHGP
Trigger: GGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAG...CCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp TACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGCAGGGGCTGCGGGGTaGCCAGGAACCGAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: YLGSFRMRPCCSSRVSVAAGAAG*PGTERS
Trigger: GCTCCGCTCGGTTCCTGGCCACCCCGCAGCCCCTGC...TGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp GGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATGCGGCCATGGCACCTaGGCAGGGGCTGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GKLAQISTKHSQGLDATACGHGT*AGAAGW
Trigger: CCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCA...TGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp CCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTTGCCCAGCTGCCCACGGGCCCACCAGGCGGGAGTaGTACCGTGTCCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PQLAGNQLGTSSCPAAHGPTRRE*YRVPLR
Trigger: TCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGG...CCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp CTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTTCCCCAGGGCCCTGCTaGCTCTCGAAGTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGELSDEALLLQQGQCGSSPGPC*LSKYPG
Trigger: CCCAGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGA...ACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp GGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGAAGCTGCGGCCATGGCACCTaGGCAGGGGCTGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GWHRRALCSTKSRMPVGSCGHGT*AGAAGW
Trigger: CCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCA...GCTTCCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp CTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGELSDEALLLQQGQCGSGTMRP*HLGRGC
Trigger: GCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACC...ACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR TCA 90 bp CTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTCATAGGCTGAGTCAGTaGGCTGCACCCCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: LGELSDEALLLQQGQCGSHRLSQ*AAPRCG
Trigger: CCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATG...ACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR TCA 90 bp GATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGCCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: DVDALWLAQAGTVLYKISPWGAG*EPVRGP
Trigger: CGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGG...CGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR TCA 90 bp AGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCACCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: SFRMRPCCSSRVSVAVFSPWGAG*EPVRGP
Trigger: CGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGG...TGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR TCA 90 bp TTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: FHHRCGCPLVGTGGHCALPWGAG*EPVRGP
Trigger: CGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGG...TAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp GTCTGTGCGGGCCAGCCAGCAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCATCCAGTTGCCCAGCTaGCCACGGGCCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: VCAGQPAVIVLGELSDEAIQLPS*PRAPPG
Trigger: GCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGAT...GGCCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGCCCGCACAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp TGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAAGCAGGGGCTGCGGGGTaGCCAGGAACCGAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: CGCPLVGTGGHCALQNLEAGAAG*PGTERS
Trigger: GCTCCGCTCGGTTCCTGGCCACCCCGCAGCCCCTGC...TTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp CACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATTGCGGCCATGGCACCTaGGCAGGGGCTGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HRCGCPLVGTGGHCALQNCGHGT*AGAAGW
Trigger: CCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCA...ATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR TCA 90 bp CACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGCCATCTCCCAGGGCCTaGAGCACAGGTGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: HRAPCHQVSRVCPARRSQPSPRA*STGVPS
Trigger: ACTGGGGACACCTGTGCTTCAGGCCCTGGGAGATGG...CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp CTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTACCAGGGGCATCCCTGCAGGGCTGGTaGTGCCCAGGATCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LWIVAMALGLVVAEVPGASLQGW*CPGSGP
Trigger: AGGGCCTGATCCTGGGCATCACCAGCCCTGCAGGGA...TGCCCCTGGTACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp CCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATGATGGCCAGCCCAAGGGGCTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLSTRRVWMLRHDGQPKGLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...CCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp AATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATATCCAGTTGCCCAGCTaGCCACGGGCCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: NASGKLAQISTKHSQGLDIQLPS*PRAPPG
Trigger: GCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGAT...ATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp TTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTAGCTGAGTCAGTGAGCTaGACCCCGATGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: LGSFRMRPCCSSRVSVAVAESVS*TPMRDS
Trigger: GCTGTCCCGCATCGGGGTGCAGCTCACTGACTCAGC...TACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp CGAATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGGCTGAGTCAGTGAGCTaGACCCCGATGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: RMPVGSWPRSPLSTRRVWAESVS*TPMRDS
Trigger: GCTGTCCCGCATCGGGGTGCAGCTCACTGACTCAGC...CCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGGAGCACCGGCCGGCTaGCCTCCCAAGAGACGCGCG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQGAPAG*PPKRRA
Trigger: CGCGCGTCTCTTGGGAGGGCAGCCGGCCGGTGCTCC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGGAGCACCGGCCGGCTaGCCTCCCAAGAGACGCGCG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGGAPAG*PPKRRA
Trigger: CGCGCGTCTCTTGGGAGGGCAGCCGGCCGGTGCTCC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR GCA 90 bp TCAGTTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCCCCAGGGCCCTGCTaGCTCTCGAAGTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: SVPSQMWMPSGWHRRALCSPGPC*LSKYPG
Trigger: CCCAGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGA...GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTGCGGCCATGGCACCTaGGCAGGGGCTGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGCGHGT*AGAAGW
Trigger: CCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTGCGGCCATGGCACCTaGGCAGGGGCTGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQCGHGT*AGAAGW
Trigger: CCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TCTCGAATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCCTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SRMPVGSWPRSPLSTRRVLVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...GACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp AGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCCCCACCAGGCGGGAGTaGTACCGTGTCCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RASGHILCTRLSRASSSAPTRRE*YRVPLR
Trigger: TCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGG...GGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: HRAPCHQVSRVCPARRSQCPVRG*PTECRH
Trigger: GTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACA...CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp AGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCCATAGGCTGAGTCAGTaGGCTGCACCCCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: RASGHILCTRLSRASSSAHRLSQ*AAPRCG
Trigger: CCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATG...GGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp TCTGTGCGGGCCAGCCAGCAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCCATAGGCTGAGTCAGTaGGCTGCACCCCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: SVRASQQLLYLGSFRMRPHRLSQ*AAPRCG
Trigger: CCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATG...GGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGCCCGCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR TCA 90 bp AGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCCCATCTCCCAGGGCCTaGAGCACAGGTGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: RASGHILCTRLSRASSSAPSPRA*STGVPS
Trigger: ACTGGGGACACCTGTGCTTCAGGCCCTGGGAGATGG...GGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp AGTAACACCAGGTGGAAGAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCCGCTGCCGAAGGAGATaGTCTCCCGCTGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SNTRWKRLVNALPVHATIRCRRR*SPAGRA
Trigger: TGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCG...GATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGGTGTTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp CACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: HRAPCHQVSRVCPARRSQSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCCCAGGCTGGGTCCATaGTGGGGCACTGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQPRLGP*WGTGEP
Trigger: CGGCTCGCCAGTGCCCCATCATGGACCCAGCCTGGG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCCAGGCTGGGTCCATaGTGGGGCACTGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPRLGP*WGTGEP
Trigger: CGGCTCGCCAGTGCCCCATCATGGACCCAGCCTGGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGPWGAG*EPVRGP
Trigger: CGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645536.1
CDS-3UTR TCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPWGAG*EPVRGP
Trigger: CGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645536.1
CDS-3UTR GCA 90 bp TTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTACTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGSFRMRPCCSSRVSVAVLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...TACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp CTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCAGCCGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LSDEALLLQQGQCGSILSRMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...GCTGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp GTTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTCGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: VPSQMWMPSGWHRRALCSRMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...AGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp TCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAACTGGGGACATCCAGTTaGCCAGCTGCCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: SQMWMPSGWHRRALCSTKLGTSS*PAAHGP
Trigger: GGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAG...TTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGAGCACCGGCCGGCTaGCCTCCCAAGAGACGCGCG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLGAPAG*PPKRRA
Trigger: CGCGCGTCTCTTGGGAGGGCAGCCGGCCGGTGCTCC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR GCA 90 bp TTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTATCCCCAGGGCCCTGCTaGCTCTCGAAGTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: FHHRCGCPLVGTGGHCALSPGPC*LSKYPG
Trigger: CCCAGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGA...TAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp CCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATGATGGCCAGCCCAAGGGGAAGGGGCTCAGCCCATaGCAGTTAAGCCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PLSTRRVWMLRHDGQPKGKGLSP*QLSLGL
Trigger: CAGACCCAGGCTTAACTGGCATGGGCTGAGCCCCTT...CCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGCAGGGGCTGCGGGGTaGCCAGGAACCGAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLAGAAG*PGTERS
Trigger: GCTCCGCTCGGTTCCTGGCCACCCCGCAGCCCCTGC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATGCGGCCATGGCACCTaGGCAGGGGCTGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLCGHGT*AGAAGW
Trigger: CCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CPLVGTGGHCALQNLECQGTMRP*HLGRGC
Trigger: GCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACC...CTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp GTCTGTGCGGGCCAGCCAGCAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCTGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: VCAGQPAVIVLGELSDEAWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...GGCCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGCCCGCACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp TCTCGAATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: SRMPVGSWPRSPLSTRRVWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...GACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp ATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTCTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: IVLGELSDEALLLQQGQCLVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...ACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp GGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACCCACCAGGCGGGAGTaGTACCGTGTCCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GLRSHFVHTSLQGLKLSQPTRRE*YRVPLR
Trigger: TCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGG...TTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp AGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCTGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: RASGHILCTRLSRASSSACPVRG*PTECRH
Trigger: GTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACA...GGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTACCAGGGGCATGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: LWIVAMALGLVVAEVPGACPVRG*PTECRH
Trigger: GTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACA...TGCCCCTGGTACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp GAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATCGGCCACTGGCTCACTaGCTCCCCTTGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: EAGQCPPSTRHHHWSQPHRPLAH*LPLSCQ
Trigger: CTGACAGGACAAGGGGAGCCAGTGAGCCAGTGGCCG...ATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp GATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGTGGGGAGCTTTCGGATaGGGCCCTGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DVDALWLAQAGTVLYKISWGAFG*GPAAPA
Trigger: TGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCA...CGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR TCA 90 bp ACCCCAAAGAAGCCGTTCTCAGGGTTGATGGCCCGGAGTCGACCTTCACTGTCACATAGGCTGAGTCAGTaGGCTGCACCCCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: TPKKPFSGLMARSRPSLSHRLSQ*AAPRCG
Trigger: CCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATG...TGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp GGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCATGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: GPQVTFCAHVSPGPQAQPCHHIG*VSELHP
Trigger: GGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCA...TGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp CTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTACCAGGGGCATGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: LWIVAMALGLVVAEVPGACHHIG*VSELHP
Trigger: GGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCA...TGCCCCTGGTACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp ACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: TGLLVTRFPGFAQPGGHSSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...ACTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACCCAGGCTGGGTCCATaGTGGGGCACTGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLPRLGP*WGTGEP
Trigger: CGGCTCGCCAGTGCCCCATCATGGACCCAGCCTGGG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACCCAGGCTGGGTCCATaGTGGGGCACTGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARPRLGP*WGTGEP
Trigger: CGGCTCGCCAGTGCCCCATCATGGACCCAGCCTGGG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGCCAGGGCGGTACAATaGGGCCATGGCACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: MPSGWHRRALCSTKSRMPARAVQ*GHGTWA
Trigger: TGCCCAGGTGCCATGGCCGCATTGTACCGCCCTGGC...TGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp TTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: FHHRCGCPLVGTGGHCALRMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...TAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp ATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTCGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: IVLGELSDEALLLQQGQCRMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...ACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp GTGCGGGCCAGCCAGCAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: VRASQQLLYLGSFRMRPCFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...GCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGCCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp GTGCGGGCCAGCCAGCAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCCATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: VRASQQLLYLGSFRMRPCHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...GCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGCCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTATCCAGTTGCCCAGCTaGCCACGGGCCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPIQLPS*PRAPPG
Trigger: GCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGAT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCTGGGGACATCCAGTTaGCCAGCTGCCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPLGTSS*PAAHGP
Trigger: GGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCTGGGGACATCCAGTTaGCCAGCTGCCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQLGTSS*PAAHGP
Trigger: GGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp ACCCCAAAGAAGCCGTTCTCAGGGTTGATGGCCCGGAGTCGACCTTCACTGTCAGCTGAGTCAGTGAGCTaGACCCCGATGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: TPKKPFSGLMARSRPSLSAESVS*TPMRDS
Trigger: GCTGTCCCGCATCGGGGTGCAGCTCACTGACTCAGC...TGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp CACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGCAGGTTTCCAGGGTTTaGCCAGCCAGGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: HRAPCHQVSRVCPARRSQQVSRV*PARRSQ
Trigger: CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTG...CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp GGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCACAGAGCGCATGGCGCTaGCCACAAACACCCCATGAC +
Preference number: 4 (lower is better)
Translates to: GPQVTFCAHVSPGPQAQPQSAWR*PQTPHD
Trigger: GTCATGGGGTGTTTGTGGGCAGCGCCATGCGCTCTG...TGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGGCCACAGGAAGTaGCCTGCCTCGTCACGCCGG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGPGHRK*PASSRR
Trigger: CCGGCGTGACGAGGCAGGGCACTTCCTGTGGCCAGG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCTGGCCACAGGAAGTaGCCTGCCTCGTCACGCCGG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPGHRK*PASSRR
Trigger: CCGGCGTGACGAGGCAGGGCACTTCCTGTGGCCAGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCACAGCAGTCGCCCCTaGCCGCCTCCGCCTAGGATG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPHSSRP*PPPPRM
Trigger: CATCCTAGGCGGAGGCGGGCAGGGGCGACTGCTGTG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCACAGCAGTCGCCCCTaGCCGCCTCCGCCTAGGATG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQHSSRP*PPPPRM
Trigger: CATCCTAGGCGGAGGCGGGCAGGGGCGACTGCTGTG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR GCA 90 bp TGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATCCCCAGGGCCCTGCTaGCTCTCGAAGTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: CGCPLVGTGGHCALQNLESPGPC*LSKYPG
Trigger: CCCAGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGA...TTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp GTTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACCACCCACAAGGGCTaGCCAAGTGGAACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VPSQMWMPSGWHRRALCSTTHKG*PSGTGC
Trigger: ACAGCCCGTTCCACTTGGGCAGCCCTTGTGGGTGGT...AGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGCGGCCATGGCACCTaGGCAGGGGCTGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASCGHGT*AGAAGW
Trigger: CCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCA...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTGCGGCCATGGCACCTaGGCAGGGGCTGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCCGHGT*AGAAGW
Trigger: CCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGAAGCTGGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LAQAGTVLYKISNASGKLGTMRP*HLGRGC
Trigger: GCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACC...CAGCTTCCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp TGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAAGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CGCPLVGTGGHCALQNLEGTMRP*HLGRGC
Trigger: GCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACC...TTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp CGAATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: RMPVGSWPRSPLSTRRVWSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...CCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp CTCAGTTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: LSSITDVDALWLAQAGTVDVDAL*LAQAGT
Trigger: AGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC...CACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAACTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp TCTCGAATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: SRMPVGSWPRSPLSTRRVDVDAL*LAQAGT
Trigger: AGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC...GACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp GGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: GPQVTFCAHVSPGPQAQPDVDAL*LAQAGT
Trigger: AGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC...TGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTTGCCCAGCTGCCCACGGGGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: PQLAGNQLGTSSCPAAHGVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...CCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp CTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTCCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LGELSDEALLLQQGQCGSPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...ACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp TGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAACCCACCAGGCGGGAGTaGTACCGTGTCCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: CGCPLVGTGGHCALQNLEPTRRE*YRVPLR
Trigger: TCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGG...TTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp CACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGCGTTGGGATTGGTGGTaGCAGAGGTACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: HRAPCHQVSRVCPARRSQRWDWW*QRYQGQ
Trigger: TTGCCCCTGGTACCTCTGCCACCACCAATCCCAACG...CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp GGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCATGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: GPQVTFCAHVSPGPQAQPWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...TGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTATGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: QGSLSPGFQGLPSQEVTVWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...TACTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp CCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACTGGATGCTACGGCATaGTGGCCAGCCCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PQVTFCAHVSPGPQAQPTLDATA*WPAQGA
Trigger: AGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAG...TGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp CTCAAGCTCAGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGTGGGGAGCTTTCGGATaGGGCCCTGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LKLSQHLFGQILVDLLCQWGAFG*GPAAPA
Trigger: TGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCA...CTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGAGCTTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp TTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTTGGGGAGCTTTCGGATaGGGCCCTGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLYLGSFRMRPCCSSRVSWGAFG*GPAAPA
Trigger: TGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCA...ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR TCA 90 bp ATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCATGGGGAGCTTTCGGATaGGGCCCTGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: MPSGWHRRALCSTKSRMPWGAFG*GPAAPA
Trigger: TGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCA...TGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR TCA 90 bp CCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATGATGGCCAGCCCAAGGGGCCACAGGACCCATGCTaGATGGAAGCACATACATGG +
Preference number: 4 (lower is better)
Translates to: PLSTRRVWMLRHDGQPKGPQDPC*MEAHTW
Trigger: CCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGG...CCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR TCA 90 bp CCCAAAGAAGCCGTTCTCAGGGTTGATGGCCCGGAGTCGACCTTCACTGTCAAACATAGGCTGAGTCAGTaGGCTGCACCCCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: PKEAVLRVDGPESTFTVKHRLSQ*AAPRCG
Trigger: CCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATG...TTTGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCGCTGCCGAAGGAGATaGTCTCCCGCTGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPRCRRR*SPAGRA
Trigger: TGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCGCTGCCGAAGGAGATaGTCTCCCGCTGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGRCRRR*SPAGRA
Trigger: TGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp AGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: SQHLFGQILVDLLCQVAPSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...CGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCCAGGCTGGGTCCATaGTGGGGCACTGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPRLGP*WGTGEP
Trigger: CGGCTCGCCAGTGCCCCATCATGGACCCAGCCTGGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCCCAGGCTGGGTCCATaGTGGGGCACTGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSPRLGP*WGTGEP
Trigger: CGGCTCGCCAGTGCCCCATCATGGACCCAGCCTGGG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPWGAG*EPVRGP
Trigger: CGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGCCAGGGCGGTACAATaGGGCCATGGCACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQARAVQ*GHGTWA
Trigger: TGCCCAGGTGCCATGGCCGCATTGTACCGCCCTGGC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGCTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DVDALWLAQAGTVLYKISLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...CGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp CCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PQVTFCAHVSPGPQAQPTRMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...TGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp GGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCATTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: GPQVTFCAHVSPGPQAQPFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...TGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp CTCAGTTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: LSSITDVDALWLAQAGTVFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...CACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAACTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp TCAGTTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCCATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: SVPSQMWMPSGWHRRALCHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTATCCAGTTGCCCAGCTaGCCACGGGCCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSIQLPS*PRAPPG
Trigger: GCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGAT...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAATCCAGTTGCCCAGCTaGCCACGGGCCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLIQLPS*PRAPPG
Trigger: GCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGAT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTCTGGGGACATCCAGTTaGCCAGCTGCCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSLGTSS*PAAHGP
Trigger: GGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAG...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTGGGGACATCCAGTTaGCCAGCTGCCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARLGTSS*PAAHGP
Trigger: GGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACTGGGGACATCCAGTTaGCCAGCTGCCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLLGTSS*PAAHGP
Trigger: GGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATTGGGGGTTTTCTCTGGGTTaGACGGCCACTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AGQCPPSTRHHHWSQPHWGFSLG*TATGSL
Trigger: CAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCC...CCAATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp CACACACTCCACTTTCCAGCCTGGCAGTGCAGGCCGCATCATAGCCAGGTTGGTGGGTTTTCTCTGGGTTaGACGGCCACTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HTLHFPAWQCRPHHSQVGGFSLG*TATGSL
Trigger: CAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCC...ACCAACCTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp CCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCTGCCCAGCAGGGAGTTaGCACCATAGCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PYSQMRVLCPLARLGPQVCPAGS*HHSRCR
Trigger: TCGGCAGCGGCTATGGTGGCAACTCCCTGCTGGGCA...GACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp TCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACCTGCCCAGCAGGGAGTTaGCACCATAGCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: SGHILCTRLSRASSSANTCPAGS*HHSRCR
Trigger: TCGGCAGCGGCTATGGTGGCAACTCCCTGCTGGGCA...GGTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp CACACACTCCACTTTCCAGCCTGGCAGTGCAGGCCGCATCATAGCCAGGTTGGTCCAGCCGAGAGGCGATaGGTAGGGCAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: HTLHFPAWQCRPHHSQVGPAERR*VGQSTS
Trigger: AGAAGTGCTTTGCCCTACGCATCGCCTCTCGGCTGG...ACCAACCTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAGTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp GCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACGATCAGCATGTGCTCTaGCAGCCAGCCCTCATCCCG +
Preference number: 4 (lower is better)
Translates to: ASGHILCTRLSRASSSANDQHVL*QPALIP
Trigger: CGGGATGAGGGCTGGCTGGCAGAGCACATGCTGATC...GTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp GAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATTTTCCAGCCTGGCAGTaGAGGCCGCATCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: EAGQCPPSTRHHHWSQPHFPAWQ*RPHHSQ
Trigger: CTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAA...ATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp CAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTAGAAGAGGCTGGTCAATaGCCTCCCAGTACACGCCAC +
Preference number: 4 (lower is better)
Translates to: QGSLSPGFQGLPSQEVTVEEAGQ*PPSTRH
Trigger: GTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTC...TACTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACCTGGCCACAGGAAGTaGCCTGCCTCGTCACGCCGG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLPGHRK*PASSRR
Trigger: CCGGCGTGACGAGGCAGGGCACTTCCTGTGGCCAGG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACCTGGCCACAGGAAGTaGCCTGCCTCGTCACGCCGG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARPGHRK*PASSRR
Trigger: CCGGCGTGACGAGGCAGGGCACTTCCTGTGGCCAGG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTCCCCAGGGCCCTGCTaGCTCTCGAAGTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPSPGPC*LSKYPG
Trigger: CCCAGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTCCCCAGGGCCCTGCTaGCTCTCGAAGTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQSPGPC*LSKYPG
Trigger: CCCAGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645536.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTCCCCAGGGCCCTGCTaGCTCTCGAAGTACCCTGGG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGSPGPC*LSKYPG
Trigger: CCCAGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645536.1
CDS-3UTR GCA 90 bp GATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGTTGTCCCCAGGGCCCTaGTGCCTCTCGAAGTACCCT +
Preference number: 4 (lower is better)
Translates to: DVDALWLAQAGTVLYKISLSPGP*CLSKYP
Trigger: AGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGACAA...CGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp TTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGAAGGGGCTCAGCCCATaGCAGTTAAGCCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: LYLGSFRMRPCCSSRVSVKGLSP*QLSPCP
Trigger: GGGACAAGGGCTTAACTGGCATGGGCTGAGCCCCTT...CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp CTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGACCACCCACAAGGGCTaGCCAAGTGGAACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LWLAQAGTVLYKISNASGTTHKG*PSGTGC
Trigger: ACAGCCCGTTCCACTTGGGCAGCCCTTGTGGGTGGT...CCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTGCAGGGGCTGCGGGGTaGCCAGGAACCGAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSAGAAG*PGTERS
Trigger: GCTCCGCTCGGTTCCTGGCCACCCCGCAGCCCCTGC...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216780.9
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGGTMRP*HLGRGC
Trigger: GCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPGTMRP*HLGRGC
Trigger: GCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GTTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: VPSQMWMPSGWHRRALCSSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...AGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp CACCAGGCGGGAGTGGTACCGTGTCCCGCTGAGAAGGAGTTACAATCACCGTCTAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: HQAGVVPCPAEKELQSPSSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...AGACGGTGATTGTAACTCCTTCTCAGCGGGACACGGTACCACTCCCGCCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp GTCTGTGCGGGCCAGCCAGCAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: VCAGQPAVIVLGELSDEASTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...GGCCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGCCCGCACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp GGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: GPQVTFCAHVSPGPQAQPSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...TGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CTAAGCACTCGCAGGGTCTGGATGCTACGGCATGATGGCCAGCCCAAGGGGCTCAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: LSTRRVWMLRHDGQPKGLNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...GAGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CCA 90 bp GCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAATGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: ARLGPQVTFCAHVSPGPQWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...TTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp TGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: CGCPLVGTGGHCALQNLEWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...TTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGLVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQLVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPLVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCCACCAGGCGGGAGTaGTACCGTGTCCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPTRRE*YRVPLR
Trigger: TCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCCCACCAGGCGGGAGTaGTACCGTGTCCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQPTRRE*YRVPLR
Trigger: TCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCCACCAGGCGGGAGTaGTACCGTGTCCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGPTRRE*YRVPLR
Trigger: TCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCAGCGCCCTGCATGCAGCCTaGAAACCTCTCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: LSDEALLLQQGQCGSILSALHAA*KPLIHS
Trigger: GCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGC...GCTGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp CCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTAGCCCTGCATGCAGCCTaGAAACCTCTCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: PVGSWPRSPLSTRRVWMLALHAA*KPLIHS
Trigger: GCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGC...TAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp GCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAATGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: ARLGPQVTFCAHVSPGPQCPVRG*PTECRH
Trigger: GTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACA...TTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp GAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATCGCTGGTCGGGCACGTaGCCAATCAGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: EAGQCPPSTRHHHWSQPHRWSGT*PIRVFS
Trigger: AGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCG...ATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp ACCCCAAAGAAGCCGTTCTCAGGGTTGATGGCCCGGAGTCGACCTTCACTGTCAGAGATGATCTCCCGCTaGTCGGGCACGTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: TPKKPFSGLMARSRPSLSEMISR*SGTWPI
Trigger: GATTGGCCACGTGCCCGACCAGCGGGAGATCATCTC...TGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp CTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTACCAGGGGCACTCCACTTTCCAGCCTaGCAGTGCAGGCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: LWIVAMALGLVVAEVPGALHFPA*QCRPHH
Trigger: ATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAG...TGCCCCTGGTACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp GAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATCGTTGGGATTGGTGGTaGCAGAGGTACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: EAGQCPPSTRHHHWSQPHRWDWW*QRYQGQ
Trigger: TTGCCCCTGGTACCTCTGCCACCACCAATCCCAACG...ATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp GGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCACCATGGCGTTGGGATTaGTGGTGGCAGAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: GPQVTFCAHVSPGPQAQPPWRWD*WWQRYQ
Trigger: CTGGTACCTCTGCCACCACCAATCCCAACGCCATGG...TGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp GCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATTGGCCATGGCGTTGGGATTaGTGGTGGCAGAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: AGQCPPSTRHHHWSQPHWPWRWD*WWQRYQ
Trigger: CTGGTACCTCTGCCACCACCAATCCCAACGCCATGG...CCAATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTGGGGCCTCCCAGGCTaGGTCCATGATGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGWGLPG*VHDGAL
Trigger: CAGTGCCCCATCATGGACCCAGCCTGGGAGGCCCCA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTGGGGCCTCCCAGGCTaGGTCCATGATGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPWGLPG*VHDGAL
Trigger: CAGTGCCCCATCATGGACCCAGCCTGGGAGGCCCCA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTGGGGCCTCCCAGGCTaGGTCCATGATGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQWGLPG*VHDGAL
Trigger: CAGTGCCCCATCATGGACCCAGCCTGGGAGGCCCCA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGAAGATACGGGGCAGCTaGGCCCCCTTGCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGKIRGS*APLRPS
Trigger: GGAAGGGCGCAAGGGGGCCCAGCTGCCCCGTATCTT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTAAGATACGGGGCAGCTaGGCCCCCTTGCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPKIRGS*APLRPS
Trigger: GGAAGGGCGCAAGGGGGCCCAGCTGCCCCGTATCTT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCGCCTCCGCCTAGGATaGGAAACCTGGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQRLRLG*ETWRRL
Trigger: CAGCCTCCGCCAGGTTTCCCATCCTAGGCGGAGGCG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR CCA 90 bp CGAATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGGGTCACTTCCGACTCTaGGACAAAAGCCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: RMPVGSWPRSPLSTRRVWGHFRL*DKSLVP
Trigger: GGGGACAAGGCTTTTGTCCCAGAGTCGGAAGTGACC...CCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CCA 90 bp CTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCAGCGCTGTGCGACAGATGTaGGTCACTTCCGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSDEALLLQQGQCGSILSAVRQM*VTSDSG
Trigger: CCCAGAGTCGGAAGTGACCCACATCTGTCGCACAGC...GCTGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CCA 90 bp GTTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTGCTGTGCGACAGATGTaGGTCACTTCCGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: VPSQMWMPSGWHRRALCSAVRQM*VTSDSG
Trigger: CCCAGAGTCGGAAGTGACCCACATCTGTCGCACAGC...AGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CCA 90 bp CTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACCTCCCATTGGAGGACTaGGTCCACTCTTCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LRSHFVHTSLQGLKLSQHLPLED*VHSSAP
Trigger: GGGGGCCGAAGAGTGGACCCAGTCCTCCAATGGGAG...GTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCTGGATGCTACGGCATaGTGGCCAGCCCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGLDATA*WPAQGA
Trigger: AGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCTGGATGCTACGGCATaGTGGCCAGCCCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQLDATA*WPAQGA
Trigger: AGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTGGGGAGCTTTCGGATaGGGCCCTGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQWGAFG*GPAAPA
Trigger: TGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp GTCTGTGCGGGCCAGCCAGCAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACC +
Preference number: 4 (lower is better)
Translates to: VCAGQPAVIVLGELSDEAGTVSR*EGVTIT
Trigger: GGTGATTGTAACTCCTTCTCAGCGGGACACGGTACC...GGCCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGCCCGCACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR TCA 90 bp TCTGTGCGGGCCAGCCAGCAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACC +
Preference number: 4 (lower is better)
Translates to: SVRASQQLLYLGSFRMRPGTVSR*EGVTIT
Trigger: GGTGATTGTAACTCCTTCTCAGCGGGACACGGTACC...GGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGCCCGCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR TCA 90 bp GAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCAGCCTCAGTTCCCCACAGGACCCATGCTaGATGGAAGCACATACATGG +
Preference number: 4 (lower is better)
Translates to: EALLLQQGQCGSILSLSSPQDPC*MEAHTW
Trigger: CCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGG...GGAACTGAGGCTGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCATAGGCTGAGTCAGTaGGCTGCACCCCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQHRLSQ*AAPRCG
Trigger: CCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCATAGGCTGAGTCAGTaGGCTGCACCCCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGHRLSQ*AAPRCG
Trigger: CCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp ATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCATGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: MPSGWHRRALCSTKSRMPCHHIG*VSELHP
Trigger: GGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCA...TGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR TCA 90 bp GTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATTGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: VDALWLAQAGTVLYKISNCHHIG*VSELHP
Trigger: GGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCA...ATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCATCTCCCAGGGCCTaGAGCACAGGTGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGPSPRA*STGVPS
Trigger: ACTGGGGACACCTGTGCTTCAGGCCCTGGGAGATGG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCCATCTCCCAGGGCCTaGAGCACAGGTGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQPSPRA*STGVPS
Trigger: ACTGGGGACACCTGTGCTTCAGGCCCTGGGAGATGG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGCGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: HRAPCHQVSRVCPARRSQRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACGCTGCCGAAGGAGATaGTCTCCCGCTGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARRCRRR*SPAGRA
Trigger: TGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACGCTGCCGAAGGAGATaGTCTCCCGCTGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLRCRRR*SPAGRA
Trigger: TGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CTCAAGCTCAGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGTCCCTGCAGGGCTGGTaGTGCCCAGGATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LKLSQHLFGQILVDLLCQSLQGW*CPGSAC
Trigger: ACATGCTGATCCTGGGCATCACCAGCCCTGCAGGGA...CTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGAGCTTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp CTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACCCCACAAACACCCCATaGCGCCAGTTGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LRSHFVHTSLQGLKLSQHPTNTP*RQLKAS
Trigger: CGAGGCCTTCAACTGGCGTCATGGGGTGTTTGTGGG...GTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTAAACCTGGCGGAGGCTaGGAGCAGGAGAGCGCCACT +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPKPGGG*EQESAT
Trigger: AGTGGCGCTCTCCTGCTCTCAGCCTCCGCCAGGTTT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR TCA 90 bp GGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATCACGTTATCTCTTGTaGAGCCCCCACACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GKLAQISTKHSQGLDATASRYLL*SPHTLL
Trigger: CAAGAGGGTGTGGGGGCTTCACAAGAGATAACGTGA...TGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGCCAGGGCGGTACAATaGGGCCATGGCACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLARAVQ*GHGTWA
Trigger: TGCCCAGGTGCCATGGCCGCATTGTACCGCCCTGGC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPRMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: DVDALWLAQAGTVLYKISFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...CGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp ATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: IVLGELSDEALLLQQGQCFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...ACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp CGAATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGCTTGCTCTCTACTCGTaGCACATCCTTGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: RMPVGSWPRSPLSTRRVWLALYS*HILGVC
Trigger: ACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAG...CCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCATCCAGTTGCCCAGCTaGCCACGGGCCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSIQLPS*PRAPPG
Trigger: GCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGAT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGCTGAGTCAGTGAGCTaGACCCCGATGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQAESVS*TPMRDS
Trigger: GCTGTCCCGCATCGGGGTGCAGCTCACTGACTCAGC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGCTGAGTCAGTGAGCTaGACCCCGATGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPAESVS*TPMRDS
Trigger: GCTGTCCCGCATCGGGGTGCAGCTCACTGACTCAGC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTGCCCAGCAGGGAGTTaGCACCATAGCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPCPAGS*HHSRCR
Trigger: TCGGCAGCGGCTATGGTGGCAACTCCCTGCTGGGCA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTGCCCAGCAGGGAGTTaGCACCATAGCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQCPAGS*HHSRCR
Trigger: TCGGCAGCGGCTATGGTGGCAACTCCCTGCTGGGCA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCATCCCCCACATGCCCAGCAGGGAGTTaGCACCATAGCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: ARSRPSLSNLIQAISSPTCPAGS*HHSRCR
Trigger: TCGGCAGCGGCTATGGTGGCAACTCCCTGCTGGGCA...TGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTGCCCAGCAGGGAGTTaGCACCATAGCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGCPAGS*HHSRCR
Trigger: TCGGCAGCGGCTATGGTGGCAACTCCCTGCTGGGCA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: SQHLFGQILVDLLCQVAPIALLP*RAGDAQ
Trigger: CTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTAT...CGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp ACCCCAAAGAAGCCGTTCTCAGGGTTGATGGCCCGGAGTCGACCTTCACTGTCAACTAGGGAAGGCGGCTaGCACATAGCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TPKKPFSGLMARSRPSLSTREGG*HIALLP
Trigger: GGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT...TGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp AGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGTTTCCAGCCTGGCAGTaGAGGCCGCATCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: SQHLFGQILVDLLCQVAPFPAWQ*RPHHSQ
Trigger: CTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAA...CGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp ACCCCAAAGAAGCCGTTCTCAGGGTTGATGGCCCGGAGTCGACCTTCACTGTCAGAAGAGGCTGGTCAATaGCCTCCCAGTACACGCCAC +
Preference number: 4 (lower is better)
Translates to: TPKKPFSGLMARSRPSLSEEAGQ*PPSTRH
Trigger: GTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTC...TGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCACAGGAAGTGCCCTaGCTCGTCACGCCGGAACCA +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPQEVP*LVTPEP
Trigger: TGGTTCCGGCGTGACGAGGCAGGGCACTTCCTGTGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCTGGCCACAGGAAGTaGCCTGCCTCGTCACGCCGG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPGHRK*PASSRR
Trigger: CCGGCGTGACGAGGCAGGGCACTTCCTGTGGCCAGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATTGTCCCCAGGGCCCTaGTGCCTCTCGAAGTACCCT +
Preference number: 4 (lower is better)
Translates to: SQMWMPSGWHRRALCSTKLSPGP*CLSKYP
Trigger: AGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGACAA...TTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp ATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCATTGTCCCCAGGGCCCTaGTGCCTCTCGAAGTACCCT +
Preference number: 4 (lower is better)
Translates to: MPSGWHRRALCSTKSRMPLSPGP*CLSKYP
Trigger: AGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGACAA...TGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp ACCTCTCATCCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTTGCCCAGCTAAGGGGCTCAGCCCATaGCAGTTAAGCCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: TSHPQLAGNQLGTSSCPAKGLSP*QLSPCP
Trigger: GGGACAAGGGCTTAACTGGCATGGGCTGAGCCCCTT...AGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp GGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGAAGCAAGGGGCTCAGCCCATaGCAGTTAAGCCTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GWHRRALCSTKSRMPVGSKGLSP*QLSLGL
Trigger: CAGACCCAGGCTTAACTGGCATGGGCTGAGCCCCTT...GCTTCCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR GCA 90 bp AGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAAGGGGCTCAGCCCATaGCAGTTAAGCCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: RASGHILCTRLSRASSSAKGLSP*QLSPSL
Trigger: GAGAGATGGGCTTAACTGGCATGGGCTGAGCCCCTT...GGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARGTMRP*HLGRGC
Trigger: GCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACC...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLGTMRP*HLGRGC
Trigger: GCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSGTMRP*HLGRGC
Trigger: GCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACC...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: VDALWLAQAGTVLYKISNDVDAL*LAQAGT
Trigger: AGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC...ATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp GTTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTCCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VPSQMWMPSGWHRRALCSPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...AGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTCTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSLVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLLVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARLVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCCCCACCAGGCGGGAGTaGTACCGTGTCCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGPTRRE*YRVPLR
Trigger: TCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGG...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp CAGGCGGGAGTGGTACCGTGTCCCGCTGAGAAGGAGTTACAATCACCGTCTTGCATGGAAGCACATACATaGTGCGGCCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: QAGVVPCPAEKELQSPSCMEAHT*CGPACS
Trigger: GCTGCATGCAGGGCCGCACCATGTATGTGCTTCCAT...GCAAGACGGTGATTGTAACTCCTTCTCAGCGGGACACGGTACCACTCCCGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQCPVRG*PTECRH
Trigger: GTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCGGCCACTGGCTCACTaGCTCCCCTTGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPRPLAH*LPLSCQ
Trigger: CTGACAGGACAAGGGGAGCCAGTGAGCCAGTGGCCG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp ACCCCAAAGAAGCCGTTCTCAGGGTTGATGGCCCGGAGTCGACCTTCACTGTCACGCTGGTCGGGCACGTaGCCAATCAGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TPKKPFSGLMARSRPSLSRWSGT*PIRVFS
Trigger: AGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCG...TGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp GCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAATGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: ARLGPQVTFCAHVSPGPQWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...TTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATGGGGCCTCCCAGGCTaGGTCCATGATGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLWGLPG*VHDGAL
Trigger: CAGTGCCCCATCATGGACCCAGCCTGGGAGGCCCCA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACTGGGGCCTCCCAGGCTaGGTCCATGATGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: RVLCPLARLGPQVTFCAHWGLPG*VHDGAL
Trigger: CAGTGCCCCATCATGGACCCAGCCTGGGAGGCCCCA...GTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCCCAGGGGTACCCCTTTaGGTCTGCGGCCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: PYSQMRVLCPLARLGPQVPGVPL*VCGHQR
Trigger: TCTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGG...GACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAAAGATACGGGGCAGCTaGGCCCCCTTGCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARKIRGS*APLRPS
Trigger: GGAAGGGCGCAAGGGGGCCCAGCTGCCCCGTATCTT...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACGCCTCCGCCTAGGATaGGAAACCTGGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLRLRLG*ETWRRL
Trigger: CAGCCTCCGCCAGGTTTCCCATCCTAGGCGGAGGCG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR CCA 90 bp CCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTAGGTCACTTCCGACTCTaGGACAAAAGCCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: PVGSWPRSPLSTRRVWMLGHFRL*DKSLVP
Trigger: GGGGACAAGGCTTTTGTCCCAGAGTCGGAAGTGACC...TAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CCA 90 bp CTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTTTGCAGCCCTCTAAGTaGGACGTTTCCTTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LGELSDEALLLQQGQCGSLQPSK*DVSFRD
Trigger: GTCTCTGAAGGAAACGTCCCACTTAGAGGGCTGCAA...ACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR CAA 72 bp GTACCAGGGGCAACCCCAAAGAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCTTCACTGTCAAACCTC +
Preference number: 4 (lower is better)
Translates to: VPGATPKKPFSG*MARSRPSLSNL
Trigger: GAGGTTTGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGTTGCCCCTGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp AGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCCCACAGGACCCATGCTaGATGGAAGCACATACATGG +
Preference number: 4 (lower is better)
Translates to: RASGHILCTRLSRASSSAPQDPC*MEAHTW
Trigger: CCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGG...GGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACATAGGCTGAGTCAGTaGGCTGCACCCCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLHRLSQ*AAPRCG
Trigger: CCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp GCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCATCCCCCACATGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: ARSRPSLSNLIQAISSPTCHHIG*VSELHP
Trigger: GGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCA...TGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQCHHIG*VSELHP
Trigger: GGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCGCTGCCGAAGGAGATaGTCTCCCGCTGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSRCRRR*SPAGRA
Trigger: TGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTCCCTGCAGGGCTGGTaGTGCCCAGGATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQSLQGW*CPGSAC
Trigger: ACATGCTGATCCTGGGCATCACCAGCCCTGCAGGGA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTCCCTGCAGGGCTGGTaGTGCCCAGGATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGSLQGW*CPGSAC
Trigger: ACATGCTGATCCTGGGCATCACCAGCCCTGCAGGGA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCCCATGACGCCAGTTaGAGGCCTCGTATACCAGGG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGPHDAS*RPRIPG
Trigger: CCCTGGTATACGAGGCCTTCAACTGGCGTCATGGGG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCCCCATGACGCCAGTTaGAGGCCTCGTATACCAGGG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQPHDAS*RPRIPG
Trigger: CCCTGGTATACGAGGCCTTCAACTGGCGTCATGGGG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCCCATGACGCCAGTTaGAGGCCTCGTATACCAGGG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPHDAS*RPRIPG
Trigger: CCCTGGTATACGAGGCCTTCAACTGGCGTCATGGGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCCACAAACACCCCATaGCGCCAGTTGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGPTNTP*RQLKAS
Trigger: CGAGGCCTTCAACTGGCGTCATGGGGTGTTTGTGGG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCCACAAACACCCCATaGCGCCAGTTGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPTNTP*RQLKAS
Trigger: CGAGGCCTTCAACTGGCGTCATGGGGTGTTTGTGGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACATCACGTTATCTCTTGTaGAGCCCCCACACCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PSQMWMPSGWHRRALCSTSRYLL*SPHTLL
Trigger: CAAGAGGGTGTGGGGGCTTCACAAGAGATAACGTGA...TGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR TCA 90 bp ATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTATCCCTGCAGGGCTGGTaGTGCCCAGGATCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: IVLLWIVAMALGLVVAEVSLQGW*CPGSGP
Trigger: AGGGCCTGATCCTGGGCATCACCAGCCCTGCAGGGA...TACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAGTAACACTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCGCCAGGGCGGTACAATaGGGCCATGGCACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCARAVQ*GHGTWA
Trigger: TGCCCAGGTGCCATGGCCGCATTGTACCGCCCTGGC...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGAATCTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QHLFGQILVDLLCQVAPNLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...ATTCGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp TTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTACTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGSFRMRPCCSSRVSVAVLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...TACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARRMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLRMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTACTTGCTCTCTACTCGTaGCACATCCTTGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PVGSWPRSPLSTRRVWMLLALYS*HILGVC
Trigger: ACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAG...TAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTATCCAGTTGCCCAGCTaGCCACGGGCCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSIQLPS*PRAPPG
Trigger: GCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGAT...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCTGGGGACATCCAGTTaGCCAGCTGCCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSLGTSS*PAAHGP
Trigger: GGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTGCTGAGTCAGTGAGCTaGACCCCGATGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSAESVS*TPMRDS
Trigger: GCTGTCCCGCATCGGGGTGCAGCTCACTGACTCAGC...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGCTGAGTCAGTGAGCTaGACCCCGATGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLAESVS*TPMRDS
Trigger: GCTGTCCCGCATCGGGGTGCAGCTCACTGACTCAGC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAGCTGAGTCAGTGAGCTaGACCCCGATGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARAESVS*TPMRDS
Trigger: GCTGTCCCGCATCGGGGTGCAGCTCACTGACTCAGC...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GGGTTGATGGCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCAGCTGAGTCAGTGAGCTaGACCCCGATGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GLMARSRPSLSNLIQAISAESVS*TPMRDS
Trigger: GCTGTCCCGCATCGGGGTGCAGCTCACTGACTCAGC...TGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGCCATCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp AGTAACACCAGGTGGAAGAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCGGCTGGCCCACGGAGTaGAGACACTTGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SNTRWKRLVNALPVHATIGWPTE*RHLTKS
Trigger: TGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCC...GATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGGTGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATGCCCAGCAGGGAGTTaGCACCATAGCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLCPAGS*HHSRCR
Trigger: TCGGCAGCGGCTATGGTGGCAACTCCCTGCTGGGCA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAACCAGCCGAGAGGCGATaGGTAGGGCAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: ARLGPQVTFCAHVSPGPQPAERR*VGQSTS
Trigger: AGAAGTGCTTTGCCCTACGCATCGCCTCTCGGCTGG...TTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGATCAGCATGTGCTCTaGCAGCCAGCCCTCATCCCG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGDQHVL*QPALIP
Trigger: CGGGATGAGGGCTGGCTGGCAGAGCACATGCTGATC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGATCAGCATGTGCTCTaGCAGCCAGCCCTCATCCCG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQDQHVL*QPALIP
Trigger: CGGGATGAGGGCTGGCTGGCAGAGCACATGCTGATC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGAATCCCAGGATCAGCATGTaGTCTGCCAGCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: QHLFGQILVDLLCQVAPNPRISM*SASQPS
Trigger: TGAGGGCTGGCTGGCAGAGCACATGCTGATCCTGGG...ATTCGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCCAGGATCAGCATGTaGTCTGCCAGCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPRISM*SASQPS
Trigger: TGAGGGCTGGCTGGCAGAGCACATGCTGATCCTGGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AGTAACACCAGGTGGAAGAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCTCGAGAGTTGGGATGTaGACAGGGCTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: SNTRWKRLVNALPVHATISRVGM*TGLLVT
Trigger: GGTGACAAGGAGCCCTGTGCACATCCCAACTCTCGA...GATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGGTGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCAGAGCGCATGGCGCTaGCCACAAACACCCCATGAC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGQSAWR*PQTPHD
Trigger: GTCATGGGGTGTTTGTGGGCAGCGCCATGCGCTCTG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGAGCGCATGGCGCTaGCCACAAACACCCCATGAC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPQSAWR*PQTPHD
Trigger: GTCATGGGGTGTTTGTGGGCAGCGCCATGCGCTCTG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACCACAGGAAGTGCCCTaGCTCGTCACGCCGGAACCA +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARPQEVP*LVTPEP
Trigger: TGGTTCCGGCGTGACGAGGCAGGGCACTTCCTGTGG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACCACAGGAAGTGCCCTaGCTCGTCACGCCGGAACCA +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLPQEVP*LVTPEP
Trigger: TGGTTCCGGCGTGACGAGGCAGGGCACTTCCTGTGG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCATCAGGTCACATTTTGTaGACACGTCTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPQVTFCAHVSPGPQAQPSGHIL*TRLSRA
Trigger: GGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA...TGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCGAGGCCTGGAGGCTGTaGCACACCTTCCCCACCGCA +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASEAWRL*HTFPTA
Trigger: TGCGGTGGGGAAGGTGTGGCACAGCCTCCAGGCCTC...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTTGTCCCCAGGGCCCTaGTGCCTCTCGAAGTACCCT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGLSPGP*CLSKYP
Trigger: AGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGACAA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTTGTCCCCAGGGCCCTaGTGCCTCTCGAAGTACCCT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQLSPGP*CLSKYP
Trigger: AGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGACAA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645536.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACATCCTTGGGGTCTGTaGGGGCCAGCCAGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLHPWGL*GPASLV
Trigger: GACAAGGCTGGCTGGCCCGCACAGACCCCAAGGATG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561286.5
ENST00000644679.1
CDS-3UTR GCA 90 bp TGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATGATGGCAAGTGGAACGGGCTGTaGGACAGATGTGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: WPRSPLSTRRVWMLRHDGKWNGL*DRCGSL
Trigger: AAGTGACCCACATCTGTCGCACAGCCCGTTCCACTT...GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASGTMRP*HLGRGC
Trigger: GCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACC...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TCTGTGCGGGCCAGCCAGCAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: SVRASQQLLYLGSFRMRPNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...GGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGCCCGCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQDVDAL*LAQAGT
Trigger: AGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: RASGHILCTRLSRASSSAVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...GGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CAGGCGGGAGTGGTACCGTGTCCCGCTGAGAAGGAGTTACAATCACCGTCTTGCGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: QAGVVPCPAEKELQSPSCVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...GCAAGACGGTGATTGTAACTCCTTCTCAGCGGGACACGGTACCACTCCCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp AGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCACCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SFRMRPCCSSRVSVAVFSPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...TGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSLVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCLVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCCACCAGGCGGGAGTaGTACCGTGTCCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPTRRE*YRVPLR
Trigger: TCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCTCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QLLYLGSFRMRPCCSSRVSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...GACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp CCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCGCCCTGCATGCAGCCTaGAAACCTCTCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: PYSQMRVLCPLARLGPQVALHAA*KPLIHS
Trigger: GCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGC...GACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp GGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAAATGGAAGCACATACATaGTGCGGCCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: GLRSHFVHTSLQGLKLSQMEAHT*CGPACS
Trigger: GCTGCATGCAGGGCCGCACCATGTATGTGCTTCCAT...TTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGATGGAAGCACATACATaGTGCGGCCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: LWLAQAGTVLYKISNASGMEAHT*CGPACS
Trigger: GCTGCATGCAGGGCCGCACCATGTATGTGCTTCCAT...CCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCTGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGCPVRG*PTECRH
Trigger: GTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACA...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTCGGCCACTGGCTCACTaGCTCCCCTTGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSRPLAH*LPLSCQ
Trigger: CTGACAGGACAAGGGGAGCCAGTGAGCCAGTGGCCG...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACGGCCACTGGCTCACTaGCTCCCCTTGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLRPLAH*LPLSCQ
Trigger: CTGACAGGACAAGGGGAGCCAGTGAGCCAGTGGCCG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATTGGAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: AGQCPPSTRHHHWSQPHWNQGFL*VARPLA
Trigger: AGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATT...CCAATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp CACACACTCCACTTTCCAGCCTGGCAGTGCAGGCCGCATCATAGCCAGGTTGGTAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: HTLHFPAWQCRPHHSQVGNQGFL*VARPLA
Trigger: AGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATT...ACCAACCTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp CTCAAGCTCAGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGCGCTGGTCGGGCACGTaGCCAATCAGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LKLSQHLFGQILVDLLCQRWSGT*PIRVFS
Trigger: AGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCG...CTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGAGCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGAGATGATCTCCCGCTaGTCGGGCACGTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQEMISR*SGTWPI
Trigger: GATTGGCCACGTGCCCGACCAGCGGGAGATCATCTC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCATCCCCCACAGAGATGATCTCCCGCTaGTCGGGCACGTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: ARSRPSLSNLIQAISSPTEMISR*SGTWPI
Trigger: GATTGGCCACGTGCCCGACCAGCGGGAGATCATCTC...TGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGAGATGATCTCCCGCTaGTCGGGCACGTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGEMISR*SGTWPI
Trigger: GATTGGCCACGTGCCCGACCAGCGGGAGATCATCTC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCCTCCACTTTCCAGCCTaGCAGTGCAGGCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: PYSQMRVLCPLARLGPQVLHFPA*QCRPHH
Trigger: ATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAG...GACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCATCCCCCACATGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: ARSRPSLSNLIQAISSPTWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...TGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp CCCAAAGAAGCCGTTCTCAGGGTTGATGGCCCGGAGTCGACCTTCACTGTCAAACCAGGTGGAAGAGGCTaGTCAATGCCCTCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: PKEAVLRVDGPESTFTVKPGGRG*SMPSQY
Trigger: GTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGG...TTTGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp TCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACCCCAGGTGGAAGAGGCTaGTCAATGCCCTCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: SGHILCTRLSRASSSANTPGGRG*SMPSQY
Trigger: GTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGG...GGTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTGGGGCCTCCCAGGCTaGGTCCATGATGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCWGLPG*VHDGAL
Trigger: CAGTGCCCCATCATGGACCCAGCCTGGGAGGCCCCA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCAGGGGTACCCCTTTaGGTCTGCGGCCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPGVPL*VCGHQR
Trigger: TCTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTGGACTCAGAGCGCATaGCGCTGCCCACAAACACCC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPWTQSA*RCPQTP
Trigger: GGGTGTTTGTGGGCAGCGCCATGCGCTCTGAGTCCA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTGGACTCAGAGCGCATaGCGCTGCCCACAAACACCC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGWTQSA*RCPQTP
Trigger: GGGTGTTTGTGGGCAGCGCCATGCGCTCTGAGTCCA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTTCTGCTGCAGCAGTaGACTCAGAGCGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQVLLQQ*TQSAWR
Trigger: GCGCCATGCGCTCTGAGTCCACTGCTGCAGCAGAAC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGTTCTGCTGCAGCAGTaGACTCAGAGCGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGVLLQQ*TQSAWR
Trigger: GCGCCATGCGCTCTGAGTCCACTGCTGCAGCAGAAC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCAAGATACGGGGCAGCTaGGCCCCCTTGCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSKIRGS*APLRPS
Trigger: GGAAGGGCGCAAGGGGGCCCAGCTGCCCCGTATCTT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCAAGATACGGGGCAGCTaGGCCCCCTTGCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCKIRGS*APLRPS
Trigger: GGAAGGGCGCAAGGGGGCCCAGCTGCCCCGTATCTT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TCAGTTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTCTCCCTGGAGCCTaGCTCACGTTATCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SVPSQMWMPSGWHRRALCSLPGA*LTLSLV
Trigger: CACAAGAGATAACGTGAGCCAGGCTCCAGGGAGAGA...GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CCA 90 bp TGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCACTCCCATTGGAGGACTaGGTCCACTCTTCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: CPLARLGPQVTFCAHVSPLPLED*VHSSAP
Trigger: GGGGGCCGAAGAGTGGACCCAGTCCTCCAATGGGAG...TGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCTGGATGCTACGGCATaGTGGCCAGCCCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSLDATA*WPAQGA
Trigger: AGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTGGGGAGCTTTCGGATaGGGCCCTGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCWGAFG*GPAAPA
Trigger: TGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp CCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACAGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACC +
Preference number: 4 (lower is better)
Translates to: PQVTFCAHVSPGPQAQPTGTVSR*EGVTIT
Trigger: GGTGATTGTAACTCCTTCTCAGCGGGACACGGTACC...TGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp AGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGCCACAGGACCCATGCTaGATGGAAGCACATACATGG +
Preference number: 4 (lower is better)
Translates to: SQHLFGQILVDLLCQVAPPQDPC*MEAHTW
Trigger: CCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGG...CGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCATAGGCTGAGTCAGTaGGCTGCACCCCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSHRLSQ*AAPRCG
Trigger: CCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLCHHIG*VSELHP
Trigger: GGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCATCTCCCAGGGCCTaGAGCACAGGTGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPSPRA*STGVPS
Trigger: ACTGGGGACACCTGTGCTTCAGGCCCTGGGAGATGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTTCCCTGCAGGGCTGGTaGTGCCCAGGATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSSLQGW*CPGSAC
Trigger: ACATGCTGATCCTGGGCATCACCAGCCCTGCAGGGA...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTGCGGCCACCAAAGATaGTGGCGTCAATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPCGHQR*WRQWGH
Trigger: GTGTCCCCATTGACGCCATCATCTTTGGTGGCCGCA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTGCGGCCACCAAAGATaGTGGCGTCAATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGCGHQR*WRQWGH
Trigger: GTGTCCCCATTGACGCCATCATCTTTGGTGGCCGCA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACCCACAAACACCCCATaGCGCCAGTTGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARPTNTP*RQLKAS
Trigger: CGAGGCCTTCAACTGGCGTCATGGGGTGTTTGTGGG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTGGGCAGATCCTGGTTaGCCTGCTCTGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGWADPG*PALSGS
Trigger: GCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTGGGCAGATCCTGGTTaGCCTGCTCTGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQWADPG*PALSGS
Trigger: GCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCAAACCTGGCGGAGGCTaGGAGCAGGAGAGCGCCACT +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCKPGGG*EQESAT
Trigger: AGTGGCGCTCTCCTGCTCTCAGCCTCCGCCAGGTTT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558096.5
ENST00000642758.1
CDS-3UTR TCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVPWGAG*EPVRGP
Trigger: CGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
CDS-3UTR TCA 90 bp CTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCAGCGAGGGAAGTTCTCCGTaGGCATCAGTTTTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: LSDEALLLQQGQCGSILSEGSSP*ASVFKH
Trigger: GTGCTTGAAAACTGATGCTCACGGAGAACTTCCCTC...GCTGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR TCA 90 bp CCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTAGAGGGAAGTTCTCCGTaGGCATCAGTTTTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: PVGSWPRSPLSTRRVWMLEGSSP*ASVFKH
Trigger: GTGCTTGAAAACTGATGCTCACGGAGAACTTCCCTC...TAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAAAGGGGCTCAGCCCATaGCAGTTAAGCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARKGLSP*QLSRRP
Trigger: TGGCCTGCGGCTTAACTGGCATGGGCTGAGCCCCTT...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216780.9
ENST00000645217.2
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GGGAAGTTCTCCGTGAGCATCAGTTTTCAAGCACACAGTCTTGAGGACAGCCTCCTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GKFSVSISFQAHSLEDSLLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...GAGGCTGTCCTCAAGACTGTGTGCTTGAAAACTGATGCTCACGGAGAACTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR GCA 90 bp CCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACACACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 4 (lower is better)
Translates to: PSQMWMPSGWHRRALCSTHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...TGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp TGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATGATGGCCACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 4 (lower is better)
Translates to: WPRSPLSTRRVWMLRHDGHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp TCGAATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGCACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 4 (lower is better)
Translates to: SNASGKLAQISTKHSQGLHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...CAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSRMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGGGTTTTCTCTGGGTTaGACGGCCACTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPGFSLG*TATGSL
Trigger: CAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGGGTTTTCTCTGGGTTaGACGGCCACTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQGFSLG*TATGSL
Trigger: CAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGGGTTTTCTCTGGGTTaGACGGCCACTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGGFSLG*TATGSL
Trigger: CAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGAATGGGTTTTCTCTGGGTTaGACGGCCACTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QHLFGQILVDLLCQVAPNGFSLG*TATGSL
Trigger: CAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCC...ATTCGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGCCCAGCAGGGAGTTaGCACCATAGCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASCPAGS*HHSRCR
Trigger: TCGGCAGCGGCTATGGTGGCAACTCCCTGCTGGGCA...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTATGCCCAGCAGGGAGTTaGCACCATAGCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: IVLLWIVAMALGLVVAEVCPAGS*HHSRCR
Trigger: TCGGCAGCGGCTATGGTGGCAACTCCCTGCTGGGCA...TACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAGTAACACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCAGCCGAGAGGCGATaGGTAGGGCAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGPAERR*VGQSTS
Trigger: AGAAGTGCTTTGCCCTACGCATCGCCTCTCGGCTGG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCCAGCCGAGAGGCGATaGGTAGGGCAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQPAERR*VGQSTS
Trigger: AGAAGTGCTTTGCCCTACGCATCGCCTCTCGGCTGG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCAGCCGAGAGGCGATaGGTAGGGCAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPAERR*VGQSTS
Trigger: AGAAGTGCTTTGCCCTACGCATCGCCTCTCGGCTGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAGATCAGCATGTGCTCTaGCAGCCAGCCCTCATCCCG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARDQHVL*QPALIP
Trigger: CGGGATGAGGGCTGGCTGGCAGAGCACATGCTGATC...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGATCAGCATGTGCTCTaGCAGCCAGCCCTCATCCCG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLDQHVL*QPALIP
Trigger: CGGGATGAGGGCTGGCTGGCAGAGCACATGCTGATC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTCCCAGGATCAGCATGTaGTCTGCCAGCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSPRISM*SASQPS
Trigger: TGAGGGCTGGCTGGCAGAGCACATGCTGATCCTGGG...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACCCAGGATCAGCATGTaGTCTGCCAGCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLPRISM*SASQPS
Trigger: TGAGGGCTGGCTGGCAGAGCACATGCTGATCCTGGG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGIALLP*RAGDAQ
Trigger: CTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTAT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCATCCCCCACAATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: ARSRPSLSNLIQAISSPTIALLP*RAGDAQ
Trigger: CTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTAT...TGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPIALLP*RAGDAQ
Trigger: CTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTAT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGACTAGGGAAGGCGGCTaGCACATAGCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQTREGG*HIALLP
Trigger: GGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGACTAGGGAAGGCGGCTaGCACATAGCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGTREGG*HIALLP
Trigger: GGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTACTAGGGAAGGCGGCTaGCACATAGCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPTREGG*HIALLP
Trigger: GGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTTTCCAGCCTGGCAGTaGAGGCCGCATCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQFPAWQ*RPHHSQ
Trigger: CTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTTTCCAGCCTGGCAGTaGAGGCCGCATCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPFPAWQ*RPHHSQ
Trigger: CTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTTTCCAGCCTGGCAGTaGAGGCCGCATCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGFPAWQ*RPHHSQ
Trigger: CTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGAAGAGGCTGGTCAATaGCCTCCCAGTACACGCCAC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPEEAGQ*PPSTRH
Trigger: GTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGAAGAGGCTGGTCAATaGCCTCCCAGTACACGCCAC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGEEAGQ*PPSTRH
Trigger: GTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGAATGAAGAGGCTGGTCAATaGCCTCCCAGTACACGCCAC +
Preference number: 4 (lower is better)
Translates to: QHLFGQILVDLLCQVAPNEEAGQ*PPSTRH
Trigger: GTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTC...ATTCGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGAAGAGGCTGGTCAATaGCCTCCCAGTACACGCCAC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQEEAGQ*PPSTRH
Trigger: GTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTTTCCAGGGTTTaGCCAGCCAGGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPQVSRV*PARRSQ
Trigger: CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAATCGAGAGTTGGGATGTaGACAGGGCTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: ARLGPQVTFCAHVSPGPQSRVGM*TGLLVT
Trigger: GGTGACAAGGAGCCCTGTGCACATCCCAACTCTCGA...TTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACAGAGCGCATGGCGCTaGCCACAAACACCCCATGAC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLQSAWR*PQTPHD
Trigger: GTCATGGGGTGTTTGTGGGCAGCGCCATGCGCTCTG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACAGAGCGCATGGCGCTaGCCACAAACACCCCATGAC +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARQSAWR*PQTPHD
Trigger: GTCATGGGGTGTTTGTGGGCAGCGCCATGCGCTCTG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTGCGCCCTTCCATaGTCAGCCAGTGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGPCALP*SASVPG
Trigger: ACCTGGAACACTGGCTGAGCATGGAAGGGCGCAAGG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCCTTGCGCCCTTCCATaGTCAGCCAGTGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQPCALP*SASVPG
Trigger: ACCTGGAACACTGGCTGAGCATGGAAGGGCGCAAGG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCTTGCGCCCTTCCATaGTCAGCCAGTGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPCALP*SASVPG
Trigger: ACCTGGAACACTGGCTGAGCATGGAAGGGCGCAAGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCACAGGAAGTGCCCTaGCTCGTCACGCCGGAACCA +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPQEVP*LVTPEP
Trigger: TGGTTCCGGCGTGACGAGGCAGGGCACTTCCTGTGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGAGCACCGGCCGGCTaGCCTCCCAAGAGACGCGCG +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGGAPAG*PPKRRA
Trigger: CGCGCGTCTCTTGGGAGGGCAGCCGGCCGGTGCTCC...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558096.5
ENST00000642758.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATTGTCCCCAGGGCCCTaGTGCCTCTCGAAGTACCCT +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLLSPGP*CLSKYP
Trigger: AGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGACAA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGAAGGGGCTCAGCCCATaGCAGTTAAGCCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQKGLSP*QLSPCP
Trigger: GGGACAAGGGCTTAACTGGCATGGGCTGAGCCCCTT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTAAGGGGCTCAGCCCATaGCAGTTAAGCCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPKGLSP*QLSPCP
Trigger: GGGACAAGGGCTTAACTGGCATGGGCTGAGCCCCTT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCATCCTTGGGGTCTGTaGGGGCCAGCCAGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCHPWGL*GPASLV
Trigger: GACAAGGCTGGCTGGCCCGCACAGACCCCAAGGATG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561286.5
ENST00000644679.1
CDS-3UTR GCA 90 bp CAGTTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAAGTGGAACGGGCTGTaGGACAGATGTGGGTCACTT +
Preference number: 4 (lower is better)
Translates to: QLLYLGSFRMRPCCSSRVKWNGL*DRCGSL
Trigger: AAGTGACCCACATCTGTCGCACAGCCCGTTCCACTT...GACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR GCA 90 bp GGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAATCCTTTGTGTTCTGCTaGAGCAGTGGACTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: GLRSHFVHTSLQGLKLSQSFVFC*SSGLRA
Trigger: CGCTCTGAGTCCACTGCTGCAGCAGAACACAAAGGA...TTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGTGCGGCCATGGCACCTaGGCAGGGGCTGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQCGHGT*AGAAGW
Trigger: CCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCA...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSGTMRP*HLGRGC
Trigger: GCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACC...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGAAGCAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: GWHRRALCSTKSRMPVGSNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...GCTTCCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARDVDAL*LAQAGT
Trigger: AGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: NASGKLAQISTKHSQGLDVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...ATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp GATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: DVDALWLAQAGTVLYKISVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...CGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp TGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAACCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CGCPLVGTGGHCALQNLEPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...TTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp GCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAACCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ARLGPQVTFCAHVSPGPQPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...TTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACATCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PQVTFCAHVSPGPQAQPTSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...TGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp TTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGAAGCTGTCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LAQAGTVLYKISNASGKLSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...CAGCTTCCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGCCCTGCATGCAGCCTaGAAACCTCTCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQALHAA*KPLIHS
Trigger: GCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGCCCTGCATGCAGCCTaGAAACCTCTCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGALHAA*KPLIHS
Trigger: GCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGCCCTGCATGCAGCCTaGAAACCTCTCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPALHAA*KPLIHS
Trigger: GCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSCPVRG*PTECRH
Trigger: GTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACA...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCCPVRG*PTECRH
Trigger: GTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCGGCCACTGGCTCACTaGCTCCCCTTGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSRPLAH*LPLSCQ
Trigger: CTGACAGGACAAGGGGAGCCAGTGAGCCAGTGGCCG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTACGGCCACTGGCTCACTaGCTCCCCTTGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: IVLLWIVAMALGLVVAEVRPLAH*LPLSCQ
Trigger: CTGACAGGACAAGGGGAGCCAGTGAGCCAGTGGCCG...TACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAGTAACACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCCGGCCACTGGCTCACTaGCTCCCCTTGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASRPLAH*LPLSCQ
Trigger: CTGACAGGACAAGGGGAGCCAGTGAGCCAGTGGCCG...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCGCTGGTCGGGCACGTaGCCAATCAGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQRWSGT*PIRVFS
Trigger: AGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCGCTGGTCGGGCACGTaGCCAATCAGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGRWSGT*PIRVFS
Trigger: AGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGAGATGATCTCCCGCTaGTCGGGCACGTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLEMISR*SGTWPI
Trigger: GATTGGCCACGTGCCCGACCAGCGGGAGATCATCTC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGAGATGATCTCCCGCTaGTCGGGCACGTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: CPLARLGPQVTFCAHVSPEMISR*SGTWPI
Trigger: GATTGGCCACGTGCCCGACCAGCGGGAGATCATCTC...TGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCTCCACTTTCCAGCCTaGCAGTGCAGGCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGLHFPA*QCRPHH
Trigger: ATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGAATCTCCACTTTCCAGCCTaGCAGTGCAGGCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: QHLFGQILVDLLCQVAPNLHFPA*QCRPHH
Trigger: ATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAG...ATTCGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCGTTGGGATTGGTGGTaGCAGAGGTACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPRWDWW*QRYQGQ
Trigger: TTGCCCCTGGTACCTCTGCCACCACCAATCCCAACG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCGTTGGGATTGGTGGTaGCAGAGGTACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQRWDWW*QRYQGQ
Trigger: TTGCCCCTGGTACCTCTGCCACCACCAATCCCAACG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCGTTGGGATTGGTGGTaGCAGAGGTACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGRWDWW*QRYQGQ
Trigger: TTGCCCCTGGTACCTCTGCCACCACCAATCCCAACG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGATGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCCATGGCGTTGGGATTaGTGGTGGCAGAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQPWRWD*WWQRYQ
Trigger: CTGGTACCTCTGCCACCACCAATCCCAACGCCATGG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCATCCCCCACACCATGGCGTTGGGATTaGTGGTGGCAGAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: ARSRPSLSNLIQAISSPTPWRWD*WWQRYQ
Trigger: CTGGTACCTCTGCCACCACCAATCCCAACGCCATGG...TGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCAGGTGGAAGAGGCTaGTCAATGCCCTCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGPGGRG*SMPSQY
Trigger: GTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGGGGCCTCCCAGGCTaGGTCCATGATGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSWGLPG*VHDGAL
Trigger: CAGTGCCCCATCATGGACCCAGCCTGGGAGGCCCCA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACCAGGGGTACCCCTTTaGGTCTGCGGCCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLPGVPL*VCGHQR
Trigger: TCTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATGGACTCAGAGCGCATaGCGCTGCCCACAAACACCC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLWTQSA*RCPQTP
Trigger: GGGTGTTTGTGGGCAGCGCCATGCGCTCTGAGTCCA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGTTCTGCTGCAGCAGTaGACTCAGAGCGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLVLLQQ*TQSAWR
Trigger: GCGCCATGCGCTCTGAGTCCACTGCTGCAGCAGAAC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGATTCTCCCCAAAGCCTaGCCACAGGAAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGILPKA*PQEVPC
Trigger: GCAGGGCACTTCCTGTGGCCAGGCTTTGGGGAGAAT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGATTCTCCCCAAAGCCTaGCCACAGGAAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQILPKA*PQEVPC
Trigger: GCAGGGCACTTCCTGTGGCCAGGCTTTGGGGAGAAT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTATTCTCCCCAAAGCCTaGCCACAGGAAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPILPKA*PQEVPC
Trigger: GCAGGGCACTTCCTGTGGCCAGGCTTTGGGGAGAAT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTTGGCACCAGCCCAATaGGTGTCTCTCGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPLAPAQ*VSLGHC
Trigger: ACAGTGCCCGAGAGACACCCATTGGGCTGGTGCCAA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTTGGCACCAGCCCAATaGGTGTCTCTCGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQLAPAQ*VSLGHC
Trigger: ACAGTGCCCGAGAGACACCCATTGGGCTGGTGCCAA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTTGGCACCAGCCCAATaGGTGTCTCTCGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGLAPAQ*VSLGHC
Trigger: ACAGTGCCCGAGAGACACCCATTGGGCTGGTGCCAA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCTAGGATGGGAAACCTaGCGGAGGCTGAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQLGWET*RRLRAG
Trigger: TCCTGCTCTCAGCCTCCGCCAGGTTTCCCATCCTAG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCTAGGATGGGAAACCTaGCGGAGGCTGAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPLGWET*RRLRAG
Trigger: TCCTGCTCTCAGCCTCCGCCAGGTTTCCCATCCTAG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGGATATGCGGAGACCTaGCTCAGCAGAGAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQGYAET*LSREER
Trigger: TCGCTCCTCTCTGCTGAGCCAGGTCTCCGCATATCC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGGATATGCGGAGACCTaGCTCAGCAGAGAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPGYAET*LSREER
Trigger: TCGCTCCTCTCTGCTGAGCCAGGTCTCCGCATATCC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR CCA 90 bp CACACAGTCTTGAGGACAGCCTCTCTCTCCCTGGAGCCTGGCTCACGTTATCTCTCTCTCCCTGGAGCCTaGCTCACGTTATCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: HTVLRTASLSLEPGSRYLSLPGA*LTLSLV
Trigger: CACAAGAGATAACGTGAGCCAGGCTCCAGGGAGAGA...GAGATAACGTGAGCCAGGCTCCAGGGAGAGAGAGGCTGTCCTCAAGACTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
3UTR CAA 72 bp AGCCTCAGTTCCATCACAGATGTGGATGCCCTCTGGTaGGCACAGGCGGGCACTGTGCTCTACAAAATCTCG +
Preference number: 4 (lower is better)
Translates to: SLSSITDVDALW*AQAGTVLYKIS
Trigger: CGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAACTGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQGTVSR*EGVTIT
Trigger: GGTGATTGTAACTCCTTCTCAGCGGGACACGGTACC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPGTVSR*EGVTIT
Trigger: GGTGATTGTAACTCCTTCTCAGCGGGACACGGTACC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGGTVSR*EGVTIT
Trigger: GGTGATTGTAACTCCTTCTCAGCGGGACACGGTACC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCCATCTCCCAGGGCCTaGAGCACAGGTGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSPSPRA*STGVPS
Trigger: ACTGGGGACACCTGTGCTTCAGGCCCTGGGAGATGG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTCCCTGCAGGGCTGGTaGTGCCCAGGATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCSLQGW*CPGSAC
Trigger: ACATGCTGATCCTGGGCATCACCAGCCCTGCAGGGA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTCCCAGGCTGGGTCCATaGTGGGGCACTGGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGPRLGP*WGTGEP
Trigger: CGGCTCGCCAGTGCCCCATCATGGACCCAGCCTGGG...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATGCGGCCACCAAAGATaGTGGCGTCAATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLCGHQR*WRQWGH
Trigger: GTGTCCCCATTGACGCCATCATCTTTGGTGGCCGCA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGATGCGGCCACCAAAGATaGTGGCGTCAATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARCGHQR*WRQWGH
Trigger: GTGTCCCCATTGACGCCATCATCTTTGGTGGCCGCA...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCCCATGACGCCAGTTaGAGGCCTCGTATACCAGGG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPHDAS*RPRIPG
Trigger: CCCTGGTATACGAGGCCTTCAACTGGCGTCATGGGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATGGGCAGATCCTGGTTaGCCTGCTCTGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLWADPG*PALSGS
Trigger: GCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCAAGGGGCTCAGCCCATaGCAGTTAAGCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSKGLSP*QLSRRP
Trigger: TGGCCTGCGGCTTAACTGGCATGGGCTGAGCCCCTT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216780.9
ENST00000645217.2
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACCACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 4 (lower is better)
Translates to: ASGHILCTRLSRASSSANHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...GTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp TTCCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 4 (lower is better)
Translates to: FHHRCGCPLVGTGGHCALHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...TAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSRMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTGCTGAGTCAGTGAGCTaGACCCCGATGCGGGACAGC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSAESVS*TPMRDS
Trigger: GCTGTCCCGCATCGGGGTGCAGCTCACTGACTCAGC...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCATCCCCCACAGGCTGGCCCACGGAGTaGAGACACTTGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: ARSRPSLSNLIQAISSPTGWPTE*RHLTKS
Trigger: TGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCC...TGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGGCTGGCCCACGGAGTaGAGACACTTGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGGWPTE*RHLTKS
Trigger: TGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAGGGTTTTCTCTGGGTTaGACGGCCACTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARGFSLG*TATGSL
Trigger: CAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCC...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTTTTCTCTGGGTTaGACGGCCACTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLGFSLG*TATGSL
Trigger: CAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCCCAGGATCAGCATGTaGTCTGCCAGCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSPRISM*SASQPS
Trigger: TGAGGGCTGGCTGGCAGAGCACATGCTGATCCTGGG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCCAGGATCAGCATGTaGTCTGCCAGCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPRISM*SASQPS
Trigger: TGAGGGCTGGCTGGCAGAGCACATGCTGATCCTGGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGIALLP*RAGDAQ
Trigger: CTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTAT...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAACTAGGGAAGGCGGCTaGCACATAGCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARTREGG*HIALLP
Trigger: GGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GGGTTGATGGCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCAACTAGGGAAGGCGGCTaGCACATAGCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GLMARSRPSLSNLIQAISTREGG*HIALLP
Trigger: GGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT...TGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGCCATCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAACTAGGGAAGGCGGCTaGCACATAGCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLTREGG*HIALLP
Trigger: GGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GGGTTGATGGCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCATTTCCAGCCTGGCAGTaGAGGCCGCATCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLMARSRPSLSNLIQAISFPAWQ*RPHHSQ
Trigger: CTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAA...TGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGCCATCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTTTTCCAGCCTGGCAGTaGAGGCCGCATCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSFPAWQ*RPHHSQ
Trigger: CTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAA...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAGAAGAGGCTGGTCAATaGCCTCCCAGTACACGCCAC +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLAREEAGQ*PPSTRH
Trigger: GTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTC...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCCAGGTTTCCAGGGTTTaGCCAGCCAGGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGQVSRV*PARRSQ
Trigger: CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTG...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACAGGTTTCCAGGGTTTaGCCAGCCAGGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLQVSRV*PARRSQ
Trigger: CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACAGGTTTCCAGGGTTTaGCCAGCCAGGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARQVSRV*PARRSQ
Trigger: CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp AGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACCAGGTTTCCAGGGTTTaGCCAGCCAGGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: RVLCPLARLGPQVTFCAHQVSRV*PARRSQ
Trigger: CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTG...GTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp GGGTTGATGGCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCACAGGTTTCCAGGGTTTaGCCAGCCAGGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: GLMARSRPSLSNLIQAISQVSRV*PARRSQ
Trigger: CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTG...TGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGCCATCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTCAGGTTTCCAGGGTTTaGCCAGCCAGGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSQVSRV*PARRSQ
Trigger: CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTG...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTCGAGAGTTGGGATGTaGACAGGGCTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGSRVGM*TGLLVT
Trigger: GGTGACAAGGAGCCCTGTGCACATCCCAACTCTCGA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTCGAGAGTTGGGATGTaGACAGGGCTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQSRVGM*TGLLVT
Trigger: GGTGACAAGGAGCCCTGTGCACATCCCAACTCTCGA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTCGAGAGTTGGGATGTaGACAGGGCTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPSRVGM*TGLLVT
Trigger: GGTGACAAGGAGCCCTGTGCACATCCCAACTCTCGA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCAGAGCGCATGGCGCTaGCCACAAACACCCCATGAC +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSQSAWR*PQTPHD
Trigger: GTCATGGGGTGTTTGTGGGCAGCGCCATGCGCTCTG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCCTTTGTGTTCTGCTaGAGCAGTGGACTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPFVFC*SSGLRA
Trigger: CGCTCTGAGTCCACTGCTGCAGCAGAACACAAAGGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCCCTTTGTGTTCTGCTaGAGCAGTGGACTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQPFVFC*SSGLRA
Trigger: CGCTCTGAGTCCACTGCTGCAGCAGAACACAAAGGG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCCTGGCCACAGGAAGTaGCCTGCCTCGTCACGCCGG +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVPGHRK*PASSRR
Trigger: CCGGCGTGACGAGGCAGGGCACTTCCTGTGGCCAGG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACATCAGGTCACATTTTGTaGACACGTCTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PQVTFCAHVSPGPQAQPTSGHIL*TRLSRA
Trigger: GGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA...TGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTTGTCCCCAGGGCCCTaGTGCCTCTCGAAGTACCCT +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSLSPGP*CLSKYP
Trigger: AGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGACAA...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAAAGGGGCTCAGCCCATaGCAGTTAAGCCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLKGLSP*QLSPCP
Trigger: GGGACAAGGGCTTAACTGGCATGGGCTGAGCCCCTT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR GCA 90 bp CCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCTCCTTTGTGTTCTGCTaGAGCAGTGGACTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PYSQMRVLCPLARLGPQVSFVFC*SSGLRA
Trigger: CGCTCTGAGTCCACTGCTGCAGCAGAACACAAAGGA...GACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCAGCAGGGGCTGCGGGGTaGCCAGGAACCGAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPAGAAG*PGTERS
Trigger: GCTCCGCTCGGTTCCTGGCCACCCCGCAGCCCCTGC...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAAAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: SQMWMPSGWHRRALCSTKNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...TTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCDVDAL*LAQAGT
Trigger: AGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTCAAGCTCAGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: LKLSQHLFGQILVDLLCQSSTAR*KSAGDI
Trigger: GATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGA...CTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGAGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp TTATTGTACTTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: LLYLGSFRMRPCCSSRVSSSTAR*KSAGDI
Trigger: GATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGA...ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAAGTACAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CCA 90 bp CCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: PYSQMRVLCPLARLGPQVSSTAR*KSAGDI
Trigger: GATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGA...GACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCGCCCTGCATGCAGCCTaGAAACCTCTCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGALHAA*KPLIHS
Trigger: GCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGC...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGATGGAAGCACATACATaGTGCGGCCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGMEAHT*CGPACS
Trigger: GCTGCATGCAGGGCCGCACCATGTATGTGCTTCCAT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGATGGAAGCACATACATaGTGCGGCCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQMEAHT*CGPACS
Trigger: GCTGCATGCAGGGCCGCACCATGTATGTGCTTCCAT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTATGGAAGCACATACATaGTGCGGCCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPMEAHT*CGPACS
Trigger: GCTGCATGCAGGGCCGCACCATGTATGTGCTTCCAT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSCPVRG*PTECRH
Trigger: GTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCGGCCACTGGCTCACTaGCTCCCCTTGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSRPLAH*LPLSCQ
Trigger: CTGACAGGACAAGGGGAGCCAGTGAGCCAGTGGCCG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: PYSQMRVLCPLARLGPQVNQGFL*VARPLA
Trigger: AGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATT...GACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCCGCTGGTCGGGCACGTaGCCAATCAGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGRWSGT*PIRVFS
Trigger: AGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCG...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACGCTGGTCGGGCACGTaGCCAATCAGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARRWSGT*PIRVFS
Trigger: AGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACGCTGGTCGGGCACGTaGCCAATCAGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLRWSGT*PIRVFS
Trigger: AGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCGAGATGATCTCCCGCTaGTCGGGCACGTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCEMISR*SGTWPI
Trigger: GATTGGCCACGTGCCCGACCAGCGGGAGATCATCTC...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTCTCCACTTTCCAGCCTaGCAGTGCAGGCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSLHFPA*QCRPHH
Trigger: ATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAG...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTCGTTGGGATTGGTGGTaGCAGAGGTACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSRWDWW*QRYQGQ
Trigger: TTGCCCCTGGTACCTCTGCCACCACCAATCCCAACG...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACGTTGGGATTGGTGGTaGCAGAGGTACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLRWDWW*QRYQGQ
Trigger: TTGCCCCTGGTACCTCTGCCACCACCAATCCCAACG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACCATGGCGTTGGGATTaGTGGTGGCAGAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARPWRWD*WWQRYQ
Trigger: CTGGTACCTCTGCCACCACCAATCCCAACGCCATGG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCCCATGGCGTTGGGATTaGTGGTGGCAGAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGPWRWD*WWQRYQ
Trigger: CTGGTACCTCTGCCACCACCAATCCCAACGCCATGG...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACCATGGCGTTGGGATTaGTGGTGGCAGAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLPWRWD*WWQRYQ
Trigger: CTGGTACCTCTGCCACCACCAATCCCAACGCCATGG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACCTCACAGTAACACCAGGTaGAAGAGGCTGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: QVTFCAHVSPGPQAQPTPHSNTR*KRLVNA
Trigger: GGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTG...AGGTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CCCAAAGAAGCCGTTCTCAGGGTTGATGGCCCGGAGTCGACCTTCACTGTCAAACACAGTAACACCAGGTaGAAGAGGCTGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: PKEAVLRVDGPESTFTVKHSNTR*KRLVNA
Trigger: GGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTG...TTTGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCAGGGGTACCCCTTTaGGTCTGCGGCCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPGVPL*VCGHQR
Trigger: TCTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCCAGGGGTACCCCTTTaGGTCTGCGGCCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSPGVPL*VCGHQR
Trigger: TCTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTGGACTCAGAGCGCATaGCGCTGCCCACAAACACCC +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSWTQSA*RCPQTP
Trigger: GGGTGTTTGTGGGCAGCGCCATGCGCTCTGAGTCCA...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATTGGCACCAGCCCAATaGGTGTCTCTCGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLLAPAQ*VSLGHC
Trigger: ACAGTGCCCGAGAGACACCCATTGGGCTGGTGCCAA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCAAGGCTCCTTCCTTTaGCACCAGCCCAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQQGSFL*HQPNGC
Trigger: ACACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCAAGGCTCCTTCCTTTaGCACCAGCCCAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGQGSFL*HQPNGC
Trigger: ACACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAAGGCTCCTTCCTTTaGCACCAGCCCAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPQGSFL*HQPNGC
Trigger: ACACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp GGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGAAGCTTGCAGCCCTCTAAGTaGGACGTTTCCTTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GWHRRALCSTKSRMPVGSLQPSK*DVSFRD
Trigger: GTCTCTGAAGGAAACGTCCCACTTAGAGGGCTGCAA...GCTTCCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGCCCATCTCTCCCATTaGAGGACTGGGTCCACTCTT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGAHLSH*RTGSTL
Trigger: AAGAGTGGACCCAGTCCTCCAATGGGAGAGATGGGC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGCCCATCTCTCCCATTaGAGGACTGGGTCCACTCTT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQAHLSH*RTGSTL
Trigger: AAGAGTGGACCCAGTCCTCCAATGGGAGAGATGGGC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
3UTR CAA 72 bp ATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCAGGGGCAACCCCAAAG +
Preference number: 4 (lower is better)
Translates to: IVLLWIVAMALG*VVAEVPGATPK
Trigger: CTTTGGGGTTGCCCCTGGTACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAGTAACACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACC +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGGTVSR*EGVTIT
Trigger: GGTGATTGTAACTCCTTCTCAGCGGGACACGGTACC...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLGTVSR*EGVTIT
Trigger: GGTGATTGTAACTCCTTCTCAGCGGGACACGGTACC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCCACAGGACCCATGCTaGATGGAAGCACATACATGG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQPQDPC*MEAHTW
Trigger: CCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCACAGGACCCATGCTaGATGGAAGCACATACATGG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGPQDPC*MEAHTW
Trigger: CCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSCHHIG*VSELHP
Trigger: GGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCCCCATGACGCCAGTTaGAGGCCTCGTATACCAGGG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSPHDAS*RPRIPG
Trigger: CCCTGGTATACGAGGCCTTCAACTGGCGTCATGGGG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCCCACAAACACCCCATaGCGCCAGTTGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSPTNTP*RQLKAS
Trigger: CGAGGCCTTCAACTGGCGTCATGGGGTGTTTGTGGG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTGGGCAGATCCTGGTTaGCCTGCTCTGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCWADPG*PALSGS
Trigger: GCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATCTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: VDALWLAQAGTVLYKISNLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...ATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp CACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: HRCGCPLVGTGGHCALQNLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...ATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR GCA 90 bp GCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAACACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 4 (lower is better)
Translates to: ARLGPQVTFCAHVSPGPQHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...TTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCTTGCTCTCTACTCGTaGCACATCCTTGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGLALYS*HILGVC
Trigger: ACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCTTGCTCTCTACTCGTaGCACATCCTTGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPLALYS*HILGVC
Trigger: ACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCTTGCTCTCTACTCGTaGCACATCCTTGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQLALYS*HILGVC
Trigger: ACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CCATCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACATTACAATCACCGTCTTaGTCTCTACTCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: PSQMWMPSGWHRRALCSTLQSPS*SLLVPH
Trigger: ATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAA...TGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTATCCAGTTGCCCAGCTaGCCACGGGCCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGIQLPS*PRAPPG
Trigger: GCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGAT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCCAGTTGCCCAGCTaGCCACGGGCCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQIQLPS*PRAPPG
Trigger: GCCTGGTGGGGCCCGTGGGCAGCTGGGCAACTGGAT...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGCTGGCCCACGGAGTaGAGACACTTGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLGWPTE*RHLTKS
Trigger: TGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGCTGGCCCACGGAGTaGAGACACTTGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: CPLARLGPQVTFCAHVSPGWPTE*RHLTKS
Trigger: TGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCC...TGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAGGCTGGCCCACGGAGTaGAGACACTTGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARGWPTE*RHLTKS
Trigger: TGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCC...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCCCAGCCGAGAGGCGATaGGTAGGGCAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASPAERR*VGQSTS
Trigger: AGAAGTGCTTTGCCCTACGCATCGCCTCTCGGCTGG...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp CACTGTCAAACCTCATCCAAGCAATATCATCCCCCACACACTCCACTTTCCAGCCCAGCCGAGAGGCGATaGGTAGGGCAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: HCQTSSKQYHPPHTPLSSPAERR*VGQSTS
Trigger: AGAAGTGCTTTGCCCTACGCATCGCCTCTCGGCTGG...GCTGGAAAGTGGAGTGTGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTGATCAGCATGTGCTCTaGCAGCCAGCCCTCATCCCG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSDQHVL*QPALIP
Trigger: CGGGATGAGGGCTGGCTGGCAGAGCACATGCTGATC...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCCCAGGATCAGCATGTaGTCTGCCAGCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSPRISM*SASQPS
Trigger: TGAGGGCTGGCTGGCAGAGCACATGCTGATCCTGGG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSIALLP*RAGDAQ
Trigger: CTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTAT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCIALLP*RAGDAQ
Trigger: CTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTAT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCACTAGGGAAGGCGGCTaGCACATAGCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCTREGG*HIALLP
Trigger: GGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCAGGTTTCCAGGGTTTaGCCAGCCAGGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCQVSRV*PARRSQ
Trigger: CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCAGGTTTCCAGGGTTTaGCCAGCCAGGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSQVSRV*PARRSQ
Trigger: CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACCCTTTGTGTTCTGCTaGAGCAGTGGACTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARPFVFC*SSGLRA
Trigger: CGCTCTGAGTCCACTGCTGCAGCAGAACACAAAGGG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216780.9
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACCCTTTGTGTTCTGCTaGAGCAGTGGACTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLPFVFC*SSGLRA
Trigger: CGCTCTGAGTCCACTGCTGCAGCAGAACACAAAGGG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTCAGGTCACATTTTGTaGACACGTCTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGSGHIL*TRLSRA
Trigger: GGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTCAGGTCACATTTTGTaGACACGTCTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPSGHIL*TRLSRA
Trigger: GGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTCAGGTCACATTTTGTaGACACGTCTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQSGHIL*TRLSRA
Trigger: GGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCAAGGGGCTCAGCCCATaGCAGTTAAGCCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSKGLSP*QLSPCP
Trigger: GGGACAAGGGCTTAACTGGCATGGGCTGAGCCCCTT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558096.5
ENST00000642758.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACCCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RVLCPLARLGPQVTFCAHPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...GTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGATCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACTCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RVLCPLARLGPQVTFCAHSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...GTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPSSTAR*KSAGDI
Trigger: GATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGSSTAR*KSAGDI
Trigger: GATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCGCCCTGCATGCAGCCTaGAAACCTCTCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCALHAA*KPLIHS
Trigger: GCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGC...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAATGGAAGCACATACATaGTGCGGCCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLMEAHT*CGPACS
Trigger: GCTGCATGCAGGGCCGCACCATGTATGTGCTTCCAT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPNQGFL*VARPLA
Trigger: AGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQNQGFL*VARPLA
Trigger: AGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGNQGFL*VARPLA
Trigger: AGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTGAGATGATCTCCCGCTaGTCGGGCACGTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSEMISR*SGTWPI
Trigger: GATTGGCCACGTGCCCGACCAGCGGGAGATCATCTC...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCTCCACTTTCCAGCCTaGCAGTGCAGGCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCLHFPA*QCRPHH
Trigger: ATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCTCCACTTTCCAGCCTaGCAGTGCAGGCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSLHFPA*QCRPHH
Trigger: ATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCGTTGGGATTGGTGGTaGCAGAGGTACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCRWDWW*QRYQGQ
Trigger: TTGCCCCTGGTACCTCTGCCACCACCAATCCCAACG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCATGGCGTTGGGATTaGTGGTGGCAGAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPWRWD*WWQRYQ
Trigger: CTGGTACCTCTGCCACCACCAATCCCAACGCCATGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCCATGGCGTTGGGATTaGTGGTGGCAGAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSPWRWD*WWQRYQ
Trigger: CTGGTACCTCTGCCACCACCAATCCCAACGCCATGG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCAGGTGGAAGAGGCTaGTCAATGCCCTCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPGGRG*SMPSQY
Trigger: GTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCACAGTAACACCAGGTaGAAGAGGCTGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPHSNTR*KRLVNA
Trigger: GGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCACAGTAACACCAGGTaGAAGAGGCTGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQHSNTR*KRLVNA
Trigger: GGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTGGGGCCTCCCAGGCTaGGTCCATGATGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVWGLPG*VHDGAL
Trigger: CAGTGCCCCATCATGGACCCAGCCTGGGAGGCCCCA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGGACTCAGAGCGCATaGCGCTGCCCACAAACACCC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSWTQSA*RCPQTP
Trigger: GGGTGTTTGTGGGCAGCGCCATGCGCTCTGAGTCCA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTGTTCTGCTGCAGCAGTaGACTCAGAGCGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSVLLQQ*TQSAWR
Trigger: GCGCCATGCGCTCTGAGTCCACTGCTGCAGCAGAAC...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCATTCTCCCCAAAGCCTaGCCACAGGAAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCILPKA*PQEVPC
Trigger: GCAGGGCACTTCCTGTGGCCAGGCTTTGGGGAGAAT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCATTCTCCCCAAAGCCTaGCCACAGGAAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSILPKA*PQEVPC
Trigger: GCAGGGCACTTCCTGTGGCCAGGCTTTGGGGAGAAT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTTGGCACCAGCCCAATaGGTGTCTCTCGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCLAPAQ*VSLGHC
Trigger: ACAGTGCCCGAGAGACACCCATTGGGCTGGTGCCAA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTTGGCACCAGCCCAATaGGTGTCTCTCGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSLAPAQ*VSLGHC
Trigger: ACAGTGCCCGAGAGACACCCATTGGGCTGGTGCCAA...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGTTCCCAGAAGTCCTTaGGGAGGGAGAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLVPRSP*GGRTAE
Trigger: CTCAGCTGTTCTCCCTCCCCAAGGACTTCTGGGAAC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTCTTTGGGCAGATCCTaGTTGACCTGCTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPSLGRS*LTCSVR
Trigger: CCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTCTTTGGGCAGATCCTaGTTGACCTGCTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGSLGRS*LTCSVR
Trigger: CCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCATTTCCTCCGCCCCGCTaGCAGGCCAGCTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPFPPPR*QASSLG
Trigger: GCCGAGGGAGCTGGCCTGCCAGCGGGGCGGAGGAAA...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCTAGGATGGGAAACCTaGCGGAGGCTGAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCLGWET*RRLRAG
Trigger: TCCTGCTCTCAGCCTCCGCCAGGTTTCCCATCCTAG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558096.5
ENST00000642758.1
CDS-3UTR TCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCGTVSR*EGVTIT
Trigger: GGTGATTGTAACTCCTTCTCAGCGGGACACGGTACC...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACC +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSGTVSR*EGVTIT
Trigger: GGTGATTGTAACTCCTTCTCAGCGGGACACGGTACC...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCCCACAGGACCCATGCTaGATGGAAGCACATACATGG +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGPQDPC*MEAHTW
Trigger: CCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGG...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACCACAGGACCCATGCTaGATGGAAGCACATACATGG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARPQDPC*MEAHTW
Trigger: CCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR TCA 90 bp TGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCACGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: CPLARLGPQVTFCAHVSPRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...TGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCGCTGCCGAAGGAGATaGTCTCCCGCTGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSRCRRR*SPAGRA
Trigger: TGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCG...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTCGCTGCCGAAGGAGATaGTCTCCCGCTGGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGRCRRR*SPAGRA
Trigger: TGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCG...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCGGCCACCAAAGATaGTGGCGTCAATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSCGHQR*WRQWGH
Trigger: GTGTCCCCATTGACGCCATCATCTTTGGTGGCCGCA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGGGCAGATCCTGGTTaGCCTGCTCTGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSWADPG*PALSGS
Trigger: GCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTTCCCTATTCCCAGATaGGGGTGCTATGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPFPIPR*GCYVLL
Trigger: CAAGAGGACATAGCACCCTCATCTGGGAATAGGGAA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGAATCTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: QHLFGQILVDLLCQVAPNLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...ATTCGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp CTGGGTCTGTTCCTGCCTCAGAGGGAAGTTCTCCGTGAGCATCAGTTTTCAAGCCTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGLFLPQREVLREHQFSSLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...GCTTGAAAACTGATGCTCACGGAGAACTTCCCTCTGAGGCAGGAACAGACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTCTTGCTCTCTACTCGTaGCACATCCTTGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSLALYS*HILGVC
Trigger: ACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAG...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCTGGGGACATCCAGTTaGCCAGCTGCCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRLGTSS*PAAHGP
Trigger: GGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTCTGGGGACATCCAGTTaGCCAGCTGCCCACGGGCCC +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLLGTSS*PAAHGP
Trigger: GGGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAG...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCGGCTGGCCCACGGAGTaGAGACACTTGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASGWPTE*RHLTKS
Trigger: TGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCC...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSIALLP*RAGDAQ
Trigger: CTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTAT...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTTTCCAGCCTGGCAGTaGAGGCCGCATCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSFPAWQ*RPHHSQ
Trigger: CTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTATCGAGAGTTGGGATGTaGACAGGGCTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: IVLLWIVAMALGLVVAEVSRVGM*TGLLVT
Trigger: GGTGACAAGGAGCCCTGTGCACATCCCAACTCTCGA...TACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAGTAACACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCTTCCCTTTGTGTTCTaGTGCAGCAGTGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQLPFVF*CSSGLR
Trigger: TCTGAGTCCACTGCTGCAGCAGAACACAAAGGGAAG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCTTCCCTTTGTGTTCTaGTGCAGCAGTGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGLPFVF*CSSGLR
Trigger: TCTGAGTCCACTGCTGCAGCAGAACACAAAGGGAAG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCCTTGCGCCCTTCCATaGTCAGCCAGTGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSPCALP*SASVPG
Trigger: ACCTGGAACACTGGCTGAGCATGGAAGGGCGCAAGG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCTGGCCACAGGAAGTaGCCTGCCTCGTCACGCCGG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPGHRK*PASSRR
Trigger: CCGGCGTGACGAGGCAGGGCACTTCCTGTGGCCAGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATCAGGTCACATTTTGTaGACACGTCTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLSGHIL*TRLSRA
Trigger: GGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCGAGGCCTGGAGGCTGTaGCACACCTTCCCCACCGCA +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSEAWRL*HTFPTA
Trigger: TGCGGTGGGGAAGGTGTGGCACAGCCTCCAGGCCTC...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCACAGCAGTCGCCCCTaGCCGCCTCCGCCTAGGATG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRHSSRP*PPPPRM
Trigger: CATCCTAGGCGGAGGCGGGCAGGGGCGACTGCTGTG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558096.5
ENST00000642758.1
CDS-3UTR GCA 90 bp CTCAAGCTCAGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGAAGTCCTTTGTGTTCTaGTGCAGCAGTGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: LKLSQHLFGQILVDLLCQKSFVF*CSSGLR
Trigger: TCTGAGTCCACTGCTGCAGCAGAACACAAAGGACTT...CTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGAGCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGGTMRP*HLGRGC
Trigger: GCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACC...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCCCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSLVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCCCACCAGGCGGGAGTaGTACCGTGTCCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSPTRRE*YRVPLR
Trigger: TCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGG...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCATGGAAGCACATACATaGTGCGGCCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCMEAHT*CGPACS
Trigger: GCTGCATGCAGGGCCGCACCATGTATGTGCTTCCAT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVCPVRG*PTECRH
Trigger: GTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCGGCCACTGGCTCACTaGCTCCCCTTGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVRPLAH*LPLSCQ
Trigger: CTGACAGGACAAGGGGAGCCAGTGAGCCAGTGGCCG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCCATGGCGTTGGGATTaGTGGTGGCAGAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSPWRWD*WWQRYQ
Trigger: CTGGTACCTCTGCCACCACCAATCCCAACGCCATGG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCCAGGTGGAAGAGGCTaGTCAATGCCCTCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSPGGRG*SMPSQY
Trigger: GTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AAAATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGCCAGGTGGAAGAGGCTaGTCAATGCCCTCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: KIVLLWIVAMALGLVVAEPGGRG*SMPSQY
Trigger: GTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGG...CTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAGTAACACTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACACAGTAACACCAGGTaGAAGAGGCTGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLHSNTR*KRLVNA
Trigger: GGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCACAAAATCGAGAGTTaGGATGTGCACAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPHKIES*DVHRAP
Trigger: AGGAGCCCTGTGCACATCCCAACTCTCGATTTTGTG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGAATCACAAAATCGAGAGTTaGGATGTGCACAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QHLFGQILVDLLCQVAPNHKIES*DVHRAP
Trigger: AGGAGCCCTGTGCACATCCCAACTCTCGATTTTGTG...ATTCGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCACAAAATCGAGAGTTaGGATGTGCACAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQHKIES*DVHRAP
Trigger: AGGAGCCCTGTGCACATCCCAACTCTCGATTTTGTG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTATTCTCCCCAAAGCCTaGCCACAGGAAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSILPKA*PQEVPC
Trigger: GCAGGGCACTTCCTGTGGCCAGGCTTTGGGGAGAAT...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTTGGCACCAGCCCAATaGGTGTCTCTCGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSLAPAQ*VSLGHC
Trigger: ACAGTGCCCGAGAGACACCCATTGGGCTGGTGCCAA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCAAGGCTCCTTCCTTTaGCACCAGCCCAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCQGSFL*HQPNGC
Trigger: ACACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCAAGGCTCCTTCCTTTaGCACCAGCCCAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSQGSFL*HQPNGC
Trigger: ACACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCGTTCCCAGAAGTCCTTaGGGAGGGAGAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCVPRSP*GGRTAE
Trigger: CTCAGCTGTTCTCCCTCCCCAAGGACTTCTGGGAAC...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCGTTCCCAGAAGTCCTTaGGGAGGGAGAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSVPRSP*GGRTAE
Trigger: CTCAGCTGTTCTCCCTCCCCAAGGACTTCTGGGAAC...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATCTTTGGGCAGATCCTaGTTGACCTGCTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLSLGRS*LTCSVR
Trigger: CCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGATCTTTGGGCAGATCCTaGTTGACCTGCTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARSLGRS*LTCSVR
Trigger: CCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGA...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAATTGGACAGTCTTTGTaGGAAGGTCTATGGCACATT +
Preference number: 4 (lower is better)
Translates to: GPQVTFCAHVSPGPQAQPIGQSL*EGLWHI
Trigger: AATGTGCCATAGACCTTCCCACAAAGACTGTCCAAT...TGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCTGGATGCTACGGCATaGTGGCCAGCCCAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSLDATA*WPAQGA
Trigger: AGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAG...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTTGGGGAGCTTTCGGATaGGGCCCTGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGWGAFG*GPAAPA
Trigger: TGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCA...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCTGGGGAGCTTTCGGATaGGGCCCTGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSWGAFG*GPAAPA
Trigger: TGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCA...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCACAGGACCCATGCTaGATGGAAGCACATACATGG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPQDPC*MEAHTW
Trigger: CCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCCCACAGGACCCATGCTaGATGGAAGCACATACATGG +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASPQDPC*MEAHTW
Trigger: CCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGG...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGCATAGGCTGAGTCAGTaGGCTGCACCCCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQHRLSQ*AAPRCG
Trigger: CCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATG...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCATAGGCTGAGTCAGTaGGCTGCACCCCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSHRLSQ*AAPRCG
Trigger: CCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATG...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVCHHIG*VSELHP
Trigger: GGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTCCATCTCCCAGGGCCTaGAGCACAGGTGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGPSPRA*STGVPS
Trigger: ACTGGGGACACCTGTGCTTCAGGCCCTGGGAGATGG...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp TGTCAAACCTCATCCAAGCAATATCATCCCCCACACACTCCACTTTCCAGCCTGCGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: CQTSSKQYHPPHTPLSSLRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...CAGGCTGGAAAGTGGAGTGTGTGGGGGATGATATTGCTTGGATGAGGTTTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCCGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTCCCTGCAGGGCTGGTaGTGCCCAGGATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVSLQGW*CPGSAC
Trigger: ACATGCTGATCCTGGGCATCACCAGCCCTGCAGGGA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCCCCATGACGCCAGTTaGAGGCCTCGTATACCAGGG +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVPHDAS*RPRIPG
Trigger: CCCTGGTATACGAGGCCTTCAACTGGCGTCATGGGG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGATTCCCTATTCCCAGATaGGGGTGCTATGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARFPIPR*GCYVLL
Trigger: CAAGAGGACATAGCACCCTCATCTGGGAATAGGGAA...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp TGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCATTCCCTATTCCCAGATaGGGGTGCTATGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CPLARLGPQVTFCAHVSPFPIPR*GCYVLL
Trigger: CAAGAGGACATAGCACCCTCATCTGGGAATAGGGAA...TGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTAAACCTGGCGGAGGCTaGGAGCAGGAGAGCGCCACT +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGKPGGG*EQESAT
Trigger: AGTGGCGCTCTCCTGCTCTCAGCCTCCGCCAGGTTT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558096.5
ENST00000642758.1
CDS-3UTR GCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTGCCAGGGCGGTACAATaGGGCCATGGCACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLARAVQ*GHGTWA
Trigger: TGCCCAGGTGCCATGGCCGCATTGTACCGCCCTGGC...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCCTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTCTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTCACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCCTTGCTCTCTACTCGTaGCACATCCTTGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSLALYS*HILGVC
Trigger: ACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAG...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCTTGCTCTCTACTCGTaGCACATCCTTGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCLALYS*HILGVC
Trigger: ACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATTTACAATCACCGTCTTaGTCTCTACTCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: HRCGCPLVGTGGHCALQNLQSPS*SLLVPH
Trigger: ATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAA...ATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR GCA 90 bp CTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACTTACAATCACCGTCTTaGTCTCTACTCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: LRSHFVHTSLQGLKLSQHLQSPS*SLLVPH
Trigger: ATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAA...GTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTGGCTGGCCCACGGAGTaGAGACACTTGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSGWPTE*RHLTKS
Trigger: TGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCC...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTTGCCCAGCAGGGAGTTaGCACCATAGCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGCPAGS*HHSRCR
Trigger: TCGGCAGCGGCTATGGTGGCAACTCCCTGCTGGGCA...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGATCAGCATGTGCTCTaGCAGCCAGCCCTCATCCCG +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVDQHVL*QPALIP
Trigger: CGGGATGAGGGCTGGCTGGCAGAGCACATGCTGATC...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCCCAGGATCAGCATGTaGTCTGCCAGCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVPRISM*SASQPS
Trigger: TGAGGGCTGGCTGGCAGAGCACATGCTGATCCTGGG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTCGAGAGTTGGGATGTaGACAGGGCTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSSRVGM*TGLLVT
Trigger: GGTGACAAGGAGCCCTGTGCACATCCCAACTCTCGA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCAGAGCGCATGGCGCTaGCCACAAACACCCCATGAC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVQSAWR*PQTPHD
Trigger: GTCATGGGGTGTTTGTGGGCAGCGCCATGCGCTCTG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACTTCCCTTTGTGTTCTaGTGCAGCAGTGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLLPFVF*CSSGLR
Trigger: TCTGAGTCCACTGCTGCAGCAGAACACAAAGGGAAG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCAGGTCACATTTTGTaGACACGTCTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSSGHIL*TRLSRA
Trigger: GGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACATATTTTCTGCAAGGTaGCTTCCCTATTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: ASGHILCTRLSRASSSANIFSAR*LPYSQM
Trigger: CATCTGGGAATAGGGAAGGCACCTTGCAGAAAATAT...GTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTTGTCCCCAGGGCCCTaGTGCCTCTCGAAGTACCCT +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVLSPGP*CLSKYP
Trigger: AGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGACAA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGTGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCTCGTGCCACATCCTTaGGGTCTGTGCGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRLVPHP*GLCGPA
Trigger: GGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASSSTAR*KSAGDI
Trigger: GATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGA...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSSSTAR*KSAGDI
Trigger: GATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGA...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCSSTAR*KSAGDI
Trigger: GATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTCGGCCACTGGCTCACTaGCTCCCCTTGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGRPLAH*LPLSCQ
Trigger: CTGACAGGACAAGGGGAGCCAGTGAGCCAGTGGCCG...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSNQGFL*VARPLA
Trigger: AGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCNQGFL*VARPLA
Trigger: AGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCACAGTAACACCAGGTaGAAGAGGCTGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCHSNTR*KRLVNA
Trigger: GGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TGTCAAACCTCATCCAAGCAATATCATCCCCCACACACTCCACTTTCCAGCCTGCACAGTAACACCAGGTaGAAGAGGCTGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: CQTSSKQYHPPHTPLSSLHSNTR*KRLVNA
Trigger: GGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTG...CAGGCTGGAAAGTGGAGTGTGTGGGGGATGATATTGCTTGGATGAGGTTTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACACAAAATCGAGAGTTaGGATGTGCACAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLHKIES*DVHRAP
Trigger: AGGAGCCCTGTGCACATCCCAACTCTCGATTTTGTG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCCAGGGGTACCCCTTTaGGTCTGCGGCCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVPGVPL*VCGHQR
Trigger: TCTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTGGACTCAGAGCGCATaGCGCTGCCCACAAACACCC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVWTQSA*RCPQTP
Trigger: GGGTGTTTGTGGGCAGCGCCATGCGCTCTGAGTCCA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGAAGATACGGGGCAGCTaGGCCCCCTTGCGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRKIRGS*APLRPS
Trigger: GGAAGGGCGCAAGGGGGCCCAGCTGCCCCGTATCTT...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTGTTCCCAGAAGTCCTTaGGGAGGGAGAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSVPRSP*GGRTAE
Trigger: CTCAGCTGTTCTCCCTCCCCAAGGACTTCTGGGAAC...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTTGGGCAGATCCTaGTTGACCTGCTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSSLGRS*LTCSVR
Trigger: CCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGA...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTCTTTGGGCAGATCCTaGTTGACCTGCTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCSLGRS*LTCSVR
Trigger: CCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCGCCTCCGCCTAGGATaGGAAACCTGGCGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRRLRLG*ETWRRL
Trigger: CAGCCTCCGCCAGGTTTCCCATCCTAGGCGGAGGCG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558096.5
ENST00000642758.1
CDS-3UTR TCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGTGGGGAGCTTTCGGATaGGGCCCTGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRWGAFG*GPAAPA
Trigger: TGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCA...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCATGGGGAGCTTTCGGATaGGGCCCTGCTGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPWGAFG*GPAAPA
Trigger: TGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCA...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCCACAGGACCCATGCTaGATGGAAGCACATACATGG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSPQDPC*MEAHTW
Trigger: CCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCATAGGCTGAGTCAGTaGGCTGCACCCCGATGCGGG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRHRLSQ*AAPRCG
Trigger: CCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTTGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGCHHIG*VSELHP
Trigger: GGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCA...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTCCATCTCCCAGGGCCTaGAGCACAGGTGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLPSPRA*STGVPS
Trigger: ACTGGGGACACCTGTGCTTCAGGCCCTGGGAGATGG...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCATCTCCCAGGGCCTaGAGCACAGGTGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPSPRA*STGVPS
Trigger: ACTGGGGACACCTGTGCTTCAGGCCCTGGGAGATGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCACCATCTCCCAGGGCCTaGAGCACAGGTGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPPSPRA*STGVPS
Trigger: ACTGGGGACACCTGTGCTTCAGGCCCTGGGAGATGG...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTGCGGCCACCAAAGATaGTGGCGTCAATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVCGHQR*WRQWGH
Trigger: GTGTCCCCATTGACGCCATCATCTTTGGTGGCCGCA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTCCCACAAACACCCCATaGCGCCAGTTGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGPTNTP*RQLKAS
Trigger: CGAGGCCTTCAACTGGCGTCATGGGGTGTTTGTGGG...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTGGGCAGATCCTGGTTaGCCTGCTCTGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVWADPG*PALSGS
Trigger: GCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTTCCCTATTCCCAGATaGGGGTGCTATGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCFPIPR*GCYVLL
Trigger: CAAGAGGACATAGCACCCTCATCTGGGAATAGGGAA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCAACTGCAAACGTTCATaGCTTCTGTGCCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASNCKRS*LLCLLA
Trigger: TGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTT...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTCTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTTACAATCACCGTCTTaGTCTCTACTCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQLQSPS*SLLVPH
Trigger: ATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp CAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGAATTTACAATCACCGTCTTaGTCTCTACTCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: QHLFGQILVDLLCQVAPNLQSPS*SLLVPH
Trigger: ATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAA...ATTCGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGGATCAGCATGTGCTCTaGCAGCCAGCCCTCATCCCG +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQDQHVL*QPALIP
Trigger: CGGGATGAGGGCTGGCTGGCAGAGCACATGCTGATC...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVIALLP*RAGDAQ
Trigger: CTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTAT...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTTTCCAGCCTGGCAGTaGAGGCCGCATCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVFPAWQ*RPHHSQ
Trigger: CTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGAAGAGGCTGGTCAATaGCCTCCCAGTACACGCCAC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVEEAGQ*PPSTRH
Trigger: GTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTC...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGATGGCAAATGGGTCGTaGATGATGATCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQMANGS*MMIFPL
Trigger: CAAAGGGAAGATCATCATGCACGACCCATTTGCCAT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTATGGCAAATGGGTCGTaGATGATGATCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPMANGS*MMIFPL
Trigger: CAAAGGGAAGATCATCATGCACGACCCATTTGCCAT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCACAGGAAGTGCCCTaGCTCGTCACGCCGGAACCA +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPQEVP*LVTPEP
Trigger: TGGTTCCGGCGTGACGAGGCAGGGCACTTCCTGTGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACATTGCTCATATTTTCTaGAAGGTGCCTTCCCTATTC +
Preference number: 4 (lower is better)
Translates to: ASGHILCTRLSRASSSANIAHIF*KVPSLF
Trigger: GAATAGGGAAGGCACCTTGCAGAAAATATGAGCAAT...GTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGTGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTTGGATGCCCTCTGGTTaGCACAGGCGGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLWMPSG*HRRALC
Trigger: GCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCA...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQDVDAL*LAQAGT
Trigger: AGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSSSTAR*KSAGDI
Trigger: GATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGCCCTGCATGCAGCCTaGAAACCTCTCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVALHAA*KPLIHS
Trigger: GCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGC...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGTGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRCPVRG*PTECRH
Trigger: GTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACA...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCGGCCACTGGCTCACTaGCTCCCCTTGTCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRRPLAH*LPLSCQ
Trigger: CTGACAGGACAAGGGGAGCCAGTGAGCCAGTGGCCG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCGCTGGTCGGGCACGTaGCCAATCAGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVRWSGT*PIRVFS
Trigger: AGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGAGATGATCTCCCGCTaGTCGGGCACGTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGEMISR*SGTWPI
Trigger: GATTGGCCACGTGCCCGACCAGCGGGAGATCATCTC...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCGTTGGGATTGGTGGTaGCAGAGGTACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVRWDWW*QRYQGQ
Trigger: TTGCCCCTGGTACCTCTGCCACCACCAATCCCAACG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAAAAAATAGTGTTACTCTaGATTGTAGCCATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: GLRSHFVHTSLQGLKLSQKIVLL*IVAMAL
Trigger: CAACGCCATGGCTACAATCCAGAGTAACACTATTTT...TTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCCAGGTGGAAGAGGCTaGTCAATGCCCTCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVPGGRG*SMPSQY
Trigger: GTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCACAGTAACACCAGGTaGAAGAGGCTGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSHSNTR*KRLVNA
Trigger: GGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCACAAAATCGAGAGTTaGGATGTGCACAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCHKIES*DVHRAP
Trigger: AGGAGCCCTGTGCACATCCCAACTCTCGATTTTGTG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTCCAGGGGTACCCCTTTaGGTCTGCGGCCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGPGVPL*VCGHQR
Trigger: TCTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGG...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTTCTGCTGCAGCAGTaGACTCAGAGCGCATGGCGC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGVLLQQ*TQSAWR
Trigger: GCGCCATGCGCTCTGAGTCCACTGCTGCAGCAGAAC...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGATTCTCCCCAAAGCCTaGCCACAGGAAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVILPKA*PQEVPC
Trigger: GCAGGGCACTTCCTGTGGCCAGGCTTTGGGGAGAAT...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACAGCATCTCTTATTATTaGACAGTCTTTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ASGHILCTRLSRASSSANSISYY*TVFVGR
Trigger: CCTTCCCACAAAGACTGTCCAATAATAAGAGATGCT...GTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCTTTCCTCCGCCCCGCTaGCAGGCCAGCTCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIFPPPR*QASSLG
Trigger: GCCGAGGGAGCTGGCCTGCCAGCGGGGCGGAGGAAA...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGGATATGCGGAGACCTaGCTCAGCAGAGAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVGYAET*LSREER
Trigger: TCGCTCCTCTCTGCTGAGCCAGGTCTCCGCATATCC...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558096.5
ENST00000642758.1
CDS-3UTR TCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCATGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPCHHIG*VSELHP
Trigger: GGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCA...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGTGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRCHHIG*VSELHP
Trigger: GGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCA...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTTCCCTGCAGGGCTGGTaGTGCCCAGGATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLSLQGW*CPGSAC
Trigger: ACATGCTGATCCTGGGCATCACCAGCCCTGCAGGGA...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGTCCCTGCAGGGCTGGTaGTGCCCAGGATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRSLQGW*CPGSAC
Trigger: ACATGCTGATCCTGGGCATCACCAGCCCTGCAGGGA...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTT +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLSRSQG*WPGVDL
Trigger: AAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCT...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTTGCGGCCACCAAAGATaGTGGCGTCAATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGCGHQR*WRQWGH
Trigger: GTGTCCCCATTGACGCCATCATCTTTGGTGGCCGCA...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTTCCCTATTCCCAGATaGGGGTGCTATGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSFPIPR*GCYVLL
Trigger: CAAGAGGACATAGCACCCTCATCTGGGAATAGGGAA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCAAAGGGGCTCAGCCCATaGCAGTTAAGCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPKGLSP*QLSRRP
Trigger: TGGCCTGCGGCTTAACTGGCATGGGCTGAGCCCCTT...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAAGGGGCTCAGCCCATaGCAGTTAAGCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLKGLSP*QLSRRP
Trigger: TGGCCTGCGGCTTAACTGGCATGGGCTGAGCCCCTT...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTCTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLLAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTTTTCGGATGAGGCCCTaGTGCTCCAGCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGFRMRP*CSSRVS
Trigger: ACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAA...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGATTACAATCACCGTCTTaGTCTCTACTCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARLQSPS*SLLVPH
Trigger: ATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAA...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATTACAATCACCGTCTTaGTCTCTACTCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLLQSPS*SLLVPH
Trigger: ATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGGCTGGCCCACGGAGTaGAGACACTTGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVGWPTE*RHLTKS
Trigger: TGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCC...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTCCAGCCGAGAGGCGATaGGTAGGGCAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGPAERR*VGQSTS
Trigger: AGAAGTGCTTTGCCCTACGCATCGCCTCTCGGCTGG...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTGATCAGCATGTGCTCTaGCAGCCAGCCCTCATCCCG +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLDQHVL*QPALIP
Trigger: CGGGATGAGGGCTGGCTGGCAGAGCACATGCTGATC...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCCAGGATCAGCATGTaGTCTGCCAGCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPRISM*SASQPS
Trigger: TGAGGGCTGGCTGGCAGAGCACATGCTGATCCTGGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSIALLP*RAGDAQ
Trigger: CTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTAT...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGTTTCCAGCCTGGCAGTaGAGGCCGCATCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQFPAWQ*RPHHSQ
Trigger: CTGGCTATGATGCGGCCTGCACTGCCAGGCTGGAAA...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGGAAGAGGCTGGTCAATaGCCTCCCAGTACACGCCAC +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQEEAGQ*PPSTRH
Trigger: GTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTC...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGAAGAGGCTGGTCAATaGCCTCCCAGTACACGCCAC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGEEAGQ*PPSTRH
Trigger: GTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTC...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAATGGCAAATGGGTCGTaGATGATGATCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARMANGS*MMIFPL
Trigger: CAAAGGGAAGATCATCATGCACGACCCATTTGCCAT...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAATGGCAAATGGGTCGTaGATGATGATCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLMANGS*MMIFPL
Trigger: CAAAGGGAAGATCATCATGCACGACCCATTTGCCAT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR GCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGATATTTTCTGCAAGGTaGCTTCCCTATTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGIFSAR*LPYSQM
Trigger: CATCTGGGAATAGGGAAGGCACCTTGCAGAAAATAT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTATATTTTCTGCAAGGTaGCTTCCCTATTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPIFSAR*LPYSQM
Trigger: CATCTGGGAATAGGGAAGGCACCTTGCAGAAAATAT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCCATGAACTGAGATTTTaGCTGGGACTGGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGHELRF*LGLETA
Trigger: TGCAGTTTCCAGTCCCAGGCAAAATCTCAGTTCATG...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTCATGAACTGAGATTTTaGCTGGGACTGGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSHELRF*LGLETA
Trigger: TGCAGTTTCCAGTCCCAGGCAAAATCTCAGTTCATG...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCAAGTCCTTTGTGTTCTaGTGCAGCAGTGGACTCAGA +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSKSFVF*CSSGLR
Trigger: TCTGAGTCCACTGCTGCAGCAGAACACAAAGGACTT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGAGCACTCGCAGGGTCTaGATGCTACGGCATGATGGC +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQSTRRV*MLRHDG
Trigger: GCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCT...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLDVDAL*LAQAGT
Trigger: AGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGATGTGGATGCCCTCTaGTTGGCACAGGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRDVDAL*LAQAGT
Trigger: AGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATC...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCCCTGCATGCAGCCTaGAAACCTCTCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGALHAA*KPLIHS
Trigger: GCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGC...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGATGGAAGCACATACATaGTGCGGCCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVMEAHT*CGPACS
Trigger: GCTGCATGCAGGGCCGCACCATGTATGTGCTTCCAT...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTCGCTGGTCGGGCACGTaGCCAATCAGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGRWSGT*PIRVFS
Trigger: AGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCG...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCAGAGATGATCTCCCGCTaGTCGGGCACGTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPEMISR*SGTWPI
Trigger: GATTGGCCACGTGCCCGACCAGCGGGAGATCATCTC...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTCGTTGGGATTGGTGGTaGCAGAGGTACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGRWDWW*QRYQGQ
Trigger: TTGCCCCTGGTACCTCTGCCACCACCAATCCCAACG...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGCCAGGTGGAAGAGGCTaGTCAATGCCCTCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQPGGRG*SMPSQY
Trigger: GTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGG...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCACAAAATCGAGAGTTaGGATGTGCACAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSHKIES*DVHRAP
Trigger: AGGAGCCCTGTGCACATCCCAACTCTCGATTTTGTG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AAAATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGCACAAAATCGAGAGTTaGGATGTGCACAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KIVLLWIVAMALGLVVAEHKIES*DVHRAP
Trigger: AGGAGCCCTGTGCACATCCCAACTCTCGATTTTGTG...CTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAGTAACACTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp TCACTGTCAAACCTCATCCAAGCAATATCATCCCCCACACACTCCACTTTCCAGCACAAAATCGAGAGTTaGGATGTGCACAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLSNLIQAISSPTHSTFQHKIES*DVHRAP
Trigger: AGGAGCCCTGTGCACATCCCAACTCTCGATTTTGTG...CTGGAAAGTGGAGTGTGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCAGGGGTACCCCTTTaGGTCTGCGGCCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPGVPL*VCGHQR
Trigger: TCTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCAAGGCTCCTTCCTTTaGCACCAGCCCAATGGGTGT +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVQGSFL*HQPNGC
Trigger: ACACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGTTCCCAGAAGTCCTTaGGGAGGGAGAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVVPRSP*GGRTAE
Trigger: CTCAGCTGTTCTCCCTCCCCAAGGACTTCTGGGAAC...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTATTGGACAGTCTTTGTaGGAAGGTCTATGGCACATT +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPIGQSL*EGLWHI
Trigger: AATGTGCCATAGACCTTCCCACAAAGACTGTCCAAT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGATTGGACAGTCTTTGTaGGAAGGTCTATGGCACATT +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGIGQSL*EGLWHI
Trigger: AATGTGCCATAGACCTTCCCACAAAGACTGTCCAAT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGATTGGACAGTCTTTGTaGGAAGGTCTATGGCACATT +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQIGQSL*EGLWHI
Trigger: AATGTGCCATAGACCTTCCCACAAAGACTGTCCAAT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACCTAGCATCTCTTATTATTaGACAGTCTTTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QVTFCAHVSPGPQAQPTPSISYY*TVFVGR
Trigger: CCTTCCCACAAAGACTGTCCAATAATAAGAGATGCT...AGGTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR TCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGTACCGTGTCCCGCTaGGAAGGAGTTACAATCACC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGGTVSR*EGVTIT
Trigger: GGTGATTGTAACTCCTTCTCAGCGGGACACGGTACC...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGTGGGCAGATCCTGGTTaGCCTGCTCTGTCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRWADPG*PALSGS
Trigger: GCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCA...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTCATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTTGCTCTCTACTCGTaGCACATCCTTGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVLALYS*HILGVC
Trigger: ACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTTACAATCACCGTCTTaGTCTCTACTCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCLQSPS*SLLVPH
Trigger: ATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAA...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGCTGGCCCACGGAGTaGAGACACTTGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGGWPTE*RHLTKS
Trigger: TGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCC...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTGGGTTTTCTCTGGGTTaGACGGCCACTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLGFSLG*TATGSL
Trigger: CAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCC...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCAGCCGAGAGGCGATaGGTAGGGCAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPAERR*VGQSTS
Trigger: AGAAGTGCTTTGCCCTACGCATCGCCTCTCGGCTGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCACCAGCCGAGAGGCGATaGGTAGGGCAAAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPPAERR*VGQSTS
Trigger: AGAAGTGCTTTGCCCTACGCATCGCCTCTCGGCTGG...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCAACTAGGGAAGGCGGCTaGCACATAGCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPTREGG*HIALLP
Trigger: GGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCTTGCGCCCTTCCATaGTCAGCCAGTGTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPCALP*SASVPG
Trigger: ACCTGGAACACTGGCTGAGCATGGAAGGGCGCAAGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAATATTTTCTGCAAGGTaGCTTCCCTATTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: CPLARLGPQVTFCAHVSPIFSAR*LPYSQM
Trigger: CATCTGGGAATAGGGAAGGCACCTTGCAGAAAATAT...TGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR GCA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTATTGCTCATATTTTCTaGAAGGTGCCTTCCCTATTC +
Preference number: 4 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPIAHIF*KVPSLF
Trigger: GAATAGGGAAGGCACCTTGCAGAAAATATGAGCAAT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGATTGCTCATATTTTCTaGAAGGTGCCTTCCCTATTC +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQIAHIF*KVPSLF
Trigger: GAATAGGGAAGGCACCTTGCAGAAAATATGAGCAAT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTAAGGGGCTCAGCCCATaGCAGTTAAGCCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGKGLSP*QLSPSL
Trigger: GAGAGATGGGCTTAACTGGCATGGGCTGAGCCCCTT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGCCCTGCATGCAGCCTaGAAACCTCTCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRALHAA*KPLIHS
Trigger: GCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGC...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCATGGAAGCACATACATaGTGCGGCCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSMEAHT*CGPACS
Trigger: GCTGCATGCAGGGCCGCACCATGTATGTGCTTCCAT...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTATGGAAGCACATACATaGTGCGGCCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGMEAHT*CGPACS
Trigger: GCTGCATGCAGGGCCGCACCATGTATGTGCTTCCAT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATGGAAGCACATACATaGTGCGGCCCTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQMEAHT*CGPACS
Trigger: GCTGCATGCAGGGCCGCACCATGTATGTGCTTCCAT...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCACGCTGGTCGGGCACGTaGCCAATCAGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPRWSGT*PIRVFS
Trigger: AGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCG...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTCTCCACTTTCCAGCCTaGCAGTGCAGGCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLLHFPA*QCRPHH
Trigger: ATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAG...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCTCCACTTTCCAGCCTaGCAGTGCAGGCCGCATCAT +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRLHFPA*QCRPHH
Trigger: ATGATGCGGCCTGCACTGCCAGGCTGGAAAGTGGAG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCACGTTGGGATTGGTGGTaGCAGAGGTACCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPRWDWW*QRYQGQ
Trigger: TTGCCCCTGGTACCTCTGCCACCACCAATCCCAACG...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCATGGCGTTGGGATTaGTGGTGGCAGAGGTACCAG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPWRWD*WWQRYQ
Trigger: CTGGTACCTCTGCCACCACCAATCCCAACGCCATGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGAAAATAGTGTTACTCTaGATTGTAGCCATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQKIVLL*IVAMAL
Trigger: CAACGCCATGGCTACAATCCAGAGTAACACTATTTT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGAAAATAGTGTTACTCTaGATTGTAGCCATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGKIVLL*IVAMAL
Trigger: CAACGCCATGGCTACAATCCAGAGTAACACTATTTT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCAGGTGGAAGAGGCTaGTCAATGCCCTCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPGGRG*SMPSQY
Trigger: GTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTCCAGGTGGAAGAGGCTaGTCAATGCCCTCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLPGGRG*SMPSQY
Trigger: GTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGG...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCACAGTAACACCAGGTaGAAGAGGCTGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVHSNTR*KRLVNA
Trigger: GGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTTCCCAGAAGTCCTTaGGGAGGGAGAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGVPRSP*GGRTAE
Trigger: CTCAGCTGTTCTCCCTCCCCAAGGACTTCTGGGAAC...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACATTGGACAGTCTTTGTaGGAAGGTCTATGGCACATT +
Preference number: 4 (lower is better)
Translates to: RVLCPLARLGPQVTFCAHIGQSL*EGLWHI
Trigger: AATGTGCCATAGACCTTCCCACAAAGACTGTCCAAT...GTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CCA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGAGCATCTCTTATTATTaGACAGTCTTTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQSISYY*TVFVGR
Trigger: CCTTCCCACAAAGACTGTCCAATAATAAGAGATGCT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGGATATGCGGAGACCTaGCTCAGCAGAGAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRGYAET*LSREER
Trigger: TCGCTCCTCTCTGCTGAGCCAGGTCTCCGCATATCC...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558096.5
ENST00000642758.1
CDS-3UTR TCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTCGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCCGGATGAGGCCCTGCTaGTCCAGCAGGGTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIRMRPC*SSRVSV
Trigger: CACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCG...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTGGCTGGCCCACGGAGTaGAGACACTTGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLGWPTE*RHLTKS
Trigger: TGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCC...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGGCTGGCCCACGGAGTaGAGACACTTGACAAAGTCA +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRGWPTE*RHLTKS
Trigger: TGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCC...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCTGCCCAGCAGGGAGTTaGCACCATAGCCGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTICPAGS*HHSRCR
Trigger: TCGGCAGCGGCTATGGTGGCAACTCCCTGCTGGGCA...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGTCGAGAGTTGGGATGTaGACAGGGCTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRSRVGM*TGLLVT
Trigger: GGTGACAAGGAGCCCTGTGCACATCCCAACTCTCGA...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCCTTTGTGTTCTGCTaGAGCAGTGGACTCAGAGCG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPFVFC*SSGLRA
Trigger: CGCTCTGAGTCCACTGCTGCAGCAGAACACAAAGGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216780.9
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTTCAGGTCACATTTTGTaGACACGTCTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGSGHIL*TRLSRA
Trigger: GGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCATATTTTCTGCAAGGTaGCTTCCCTATTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSIFSAR*LPYSQM
Trigger: CATCTGGGAATAGGGAAGGCACCTTGCAGAAAATAT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAATTGCTCATATTTTCTaGAAGGTGCCTTCCCTATTC +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARIAHIF*KVPSLF
Trigger: GAATAGGGAAGGCACCTTGCAGAAAATATGAGCAAT...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTAATCTCGAATGCCAGTaGGAAGCTGGCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGNLECQ*EAGPDL
Trigger: GAGATCTGGGCCAGCTTCCCACTGGCATTCGAGATT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGTCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTTCGCTGGAAATCAGCTaGGGACATCCAGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLSLEIS*GHPVAQ
Trigger: CTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGA...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQSSTAR*KSAGDI
Trigger: GATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGA...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCTGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTICPVRG*PTECRH
Trigger: GTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACA...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGNQGFL*VARPLA
Trigger: AGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAAAAATAGTGTTACTCTaGATTGTAGCCATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: SARCLPYSQMRVLCPLARKIVLL*IVAMAL
Trigger: CAACGCCATGGCTACAATCCAGAGTAACACTATTTT...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCACAAAATCGAGAGTTaGGATGTGCACAGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVHKIES*DVHRAP
Trigger: AGGAGCCCTGTGCACATCCCAACTCTCGATTTTGTG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTTCCCAGAAGTCCTTaGGGAGGGAGAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRVPRSP*GGRTAE
Trigger: CTCAGCTGTTCTCCCTCCCCAAGGACTTCTGGGAAC...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTTCTTTGGGCAGATCCTaGTTGACCTGCTCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGSLGRS*LTCSVR
Trigger: CCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGA...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAAGCATCTCTTATTATTaGACAGTCTTTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLSISYY*TVFVGR
Trigger: CCTTCCCACAAAGACTGTCCAATAATAAGAGATGCT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
3UTR CAA 72 bp TCCCAGTACACGCCACCATCACTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTCTGGATTGTAGCCATG +
Preference number: 4 (lower is better)
Translates to: SQYTPPSLVSAT*VKIVLLWIVAM
Trigger: CATGGCTACAATCCAGAGTAACACTATTTTTACCAATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR TCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCACGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPRSADT*QSHHLP
Trigger: TGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCG...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTTTCCCTATTCCCAGATaGGGGTGCTATGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGFPIPR*GCYVLL
Trigger: CAAGAGGACATAGCACCCTCATCTGGGAATAGGGAA...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR TCA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGAACTGCAAACGTTCATaGCTTCTGTGCCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQNCKRS*LLCLLA
Trigger: TGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTT...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCCTCGCAGGGTCTGGATaGTACGGCATGATGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTILAGSG*YGMMAS
Trigger: GCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAG...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTCACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTCTTGCTCTCTACTCGTaGCACATCCTTGGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLLALYS*HILGVC
Trigger: ACAGACCCCAAGGATGTGGCACGAGTAGAGAGCAAG...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCCCCAGGATCAGCATGTaGTCTGCCAGCCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIPRISM*SASQPS
Trigger: TGAGGGCTGGCTGGCAGAGCACATGCTGATCCTGGG...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGTCAGGTCACATTTTGTaGACACGTCTCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRSGHIL*TRLSRA
Trigger: GGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCATTGCTCATATTTTCTaGAAGGTGCCTTCCCTATTC +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCIAHIF*KVPSLF
Trigger: GAATAGGGAAGGCACCTTGCAGAAAATATGAGCAAT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTTCCATCACAGATGTaGATGCCCTCTGGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRVPSQM*MPSGWH
Trigger: GTGCCAACCAGAGGGCATCCACATCTGTGATGGAAC...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRSSTAR*KSAGDI
Trigger: GATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGA...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRNQGFL*VARPLA
Trigger: AGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATT...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCAAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPNQGFL*VARPLA
Trigger: AGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATT...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCGAGATGATCTCCCGCTaGTCGGGCACGTGGCCAATC +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIEMISR*SGTWPI
Trigger: GATTGGCCACGTGCCCGACCAGCGGGAGATCATCTC...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCTGGCGTTGGGATTGGTaGTGGCAGAGGTACCAGGGG +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIWRWDW*WQRYQG
Trigger: CCCCTGGTACCTCTGCCACCACCAATCCCAACGCCA...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCAAAATAGTGTTACTCTaGATTGTAGCCATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSKIVLL*IVAMAL
Trigger: CAACGCCATGGCTACAATCCAGAGTAACACTATTTT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCAAAATAGTGTTACTCTaGATTGTAGCCATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCKIVLL*IVAMAL
Trigger: CAACGCCATGGCTACAATCCAGAGTAACACTATTTT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp CACTGTCAAACCTCATCCAAGCAATATCATCCCCCACACACTCCACTTTCCAGCAAAATAGTGTTACTCTaGATTGTAGCCATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: HCQTSSKQYHPPHTPLSSKIVLL*IVAMAL
Trigger: CAACGCCATGGCTACAATCCAGAGTAACACTATTTT...GCTGGAAAGTGGAGTGTGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTCACAGTAACACCAGGTaGAAGAGGCTGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLHSNTR*KRLVNA
Trigger: GGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTG...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCAGCATCTCTTATTATTaGACAGTCTTTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCSISYY*TVFVGR
Trigger: CCTTCCCACAAAGACTGTCCAATAATAAGAGATGCT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCTACAAAATCTCGAATaGCAGTGGGAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRLQNLE*QWEAGP
Trigger: TGGGCCAGCTTCCCACTGGCATTCGAGATTTTGTAG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCCATCCTTGGGGTCTGTaGGGGCCAGCCAGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIHPWGL*GPASSY
Trigger: ATAACTGCTGGCTGGCCCGCACAGACCCCAAGGATG...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTTACAATCACCGTCTTaGTCTCTACTCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVLQSPS*SLLVPH
Trigger: ATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCGGGTTTTCTCTGGGTTaGACGGCCACTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIGFSLG*TATGSL
Trigger: CAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCC...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCACTAGGGAAGGCGGCTaGCACATAGCGCTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTITREGG*HIALLP
Trigger: GGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGATGGCAAATGGGTCGTaGATGATGATCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVMANGS*MMIFPL
Trigger: CAAAGGGAAGATCATCATGCACGACCCATTTGCCAT...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR GCA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTATTGCTCATATTTTCTaGAAGGTGCCTTCCCTATTC +
Preference number: 4 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSIAHIF*KVPSLF
Trigger: GAATAGGGAAGGCACCTTGCAGAAAATATGAGCAAT...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCGCCCTGCATGCAGCCTaGAAACCTCTCATCCACAGC +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIALHAA*KPLIHS
Trigger: GCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGC...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCCTCATTCAACTGATGTaGAAACTAAAGCTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: LRFCLGLETANVHDFCASLIQLM*KLKLRE
Trigger: TTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR TCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCAAGATCACAAAACCAGTaGCTGGTGGAGTTGGGACAT +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPRSQNQ*LVELGH
Trigger: ATGTCCCAACTCCACCAGTCACTGGTTTTGTGATCT...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCTTACAATCACCGTCTTaGTCTCTACTCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSLQSPS*SLLVPH
Trigger: ATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAA...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCCCAGCAGGGTCAGTGTaGCAGTATTCTCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIPAGSV*QYSQPQ
Trigger: CTGAGGCTGAGAATACTGCCACACTGACCCTGCTGG...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGATTGGACAGTCTTTGTaGGAAGGTCTATGGCACATT +
Preference number: 4 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVIGQSL*EGLWHI
Trigger: AATGTGCCATAGACCTTCCCACAAAGACTGTCCAAT...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTTTACAATCACCGTCTTaGTCTCTACTCGTGCCACAT +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLLQSPS*SLLVPH
Trigger: ATGTGGCACGAGTAGAGAGCAAGACGGTGATTGTAA...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGATGGCAAATGGGTCGTaGATGATGATCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRMANGS*MMIFPL
Trigger: CAAAGGGAAGATCATCATGCACGACCCATTTGCCAT...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTINQGFL*VARPLA
Trigger: AGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATT...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTATTGGACAGTCTTTGTaGGAAGGTCTATGGCACATT +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGIGQSL*EGLWHI
Trigger: AATGTGCCATAGACCTTCCCACAAAGACTGTCCAAT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTGATGGTTGGAGGTTGTaGAGAAAGCTTTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLDGWRL*RKLFHH
Trigger: ATGGTGGAAAAGCTTTCTCCACAACCTCCAACCATC...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTGATTTTGCCTGGGACTaGAAACTGCAAACGTTCATG +
Preference number: 4 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLDFAWD*KLQTFM
Trigger: CATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCCACAGGCGGGCACTGTaGTCTACAAAATCTCGAATG +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIHRRAL*STKSRM
Trigger: CATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTG...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGATATTTTCTGCAAGGTaGCTTCCCTATTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRIFSAR*LPYSQM
Trigger: CATCTGGGAATAGGGAAGGCACCTTGCAGAAAATAT...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTATTGCTCATATTTTCTaGAAGGTGCCTTCCCTATTC +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGIAHIF*KVPSLF
Trigger: GAATAGGGAAGGCACCTTGCAGAAAATATGAGCAAT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTAAAATAGTGTTACTCTaGATTGTAGCCATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGKIVLL*IVAMAL
Trigger: CAACGCCATGGCTACAATCCAGAGTAACACTATTTT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTAGCATCTCTTATTATTaGACAGTCTTTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGSISYY*TVFVGR
Trigger: CCTTCCCACAAAGACTGTCCAATAATAAGAGATGCT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR GCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGATTGCTCATATTTTCTaGAAGGTGCCTTCCCTATTC +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRIAHIF*KVPSLF
Trigger: GAATAGGGAAGGCACCTTGCAGAAAATATGAGCAAT...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGAAAATAGTGTTACTCTaGATTGTAGCCATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRKIVLL*IVAMAL
Trigger: CAACGCCATGGCTACAATCCAGAGTAACACTATTTT...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCAAAAATAGTGTTACTCTaGATTGTAGCCATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: MWKLKLREVEQLSQITKPKIVLL*IVAMAL
Trigger: CAACGCCATGGCTACAATCCAGAGTAACACTATTTT...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGAGCATCTCTTATTATTaGACAGTCTTTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRSISYY*TVFVGR
Trigger: CCTTCCCACAAAGACTGTCCAATAATAAGAGATGCT...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CCA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCTCATTCAACTGATGTaGAAACTAAAGCTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSLIQLM*KLKLRE
Trigger: TTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCGATGGTTGGAGGTTGTaGAGAAAGCTTTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIDGWRL*RKLFHH
Trigger: ATGGTGGAAAAGCTTTCTCCACAACCTCCAACCATC...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CCA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCAAAATAGTGTTACTCTaGATTGTAGCCATGGCGTTG +
Preference number: 4 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIKIVLL*IVAMAL
Trigger: CAACGCCATGGCTACAATCCAGAGTAACACTATTTT...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS CCA 90 bp AGCACCGGCCGGCTGCCCTCCCAAGAGACGCGCGGCGCGGGAGGCTaGACCCACAGCAGTCGCCCCTGCCCGCCTCCGCCTAGGATGGGA +
Preference number: 5 (lower is better)
Translates to: STGRLPSQETRGAGG*THSSRPCPPPPRMG
Trigger: TCCCATCCTAGGCGGAGGCGGGCAGGGGCGACTGCTGTGGGTCCAGCCTCCCGCGCCGCGCGTCTCTTGGGAGGGCAGCCGGCCGGTGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000560657.1
ENST00000561050.5
ENST00000642552.1
ENST00000642758.1
ENST00000643521.1
ENST00000645536.1
ENST00000647090.1
CDS GCA 90 bp CAAGAGACGCGCGGCGCGGGAGGCTGGACCCACAGCAGTCGCCCCTaGCCGCCTCCGCCTAGGATGGGAAACCTGGCGGAGGCTGAGAGC +
Preference number: 5 (lower is better)
Translates to: QETRGAGGWTHSSRP*PPPPRMGNLAEAES
Trigger: GCTCTCAGCCTCCGCCAGGTTTCCCATCCTAGGCGGAGGCGGGCAGGGGCGACTGCTGTGGGTCCAGCCTCCCGCGCCGCGCGTCTCTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000560657.1
ENST00000561050.5
ENST00000642552.1
ENST00000642758.1
ENST00000643521.1
ENST00000645536.1
ENST00000647090.1
CDS GCA 90 bp GCAGAGAAGGGGAGGTGCAGGCGGAAACGAGGAGCACCGGCCGGCTaGCCTCCCAAGAGACGCGCGGCGCGGGAGGCTGGACCCACAGCA +
Preference number: 5 (lower is better)
Translates to: AEKGRCRRKRGAPAG*PPKRRAAREAGPTA
Trigger: TGCTGTGGGTCCAGCCTCCCGCGCCGCGCGTCTCTTGGGAGGGCAGCCGGCCGGTGCTCCTCGTTTCCGCCTGCACCTCCCCTTCTCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000560657.1
ENST00000561050.5
ENST00000642552.1
ENST00000642758.1
ENST00000643521.1
ENST00000645536.1
ENST00000647090.1
CDS CCA 90 bp CCCACAGCAGTCGCCCCTGCCCGCCTCCGCCTAGGATGGGAAACCTaGCGGAGGCTGAGAGCAGGAGAGCGCCACTGGCAGCCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: PTAVAPARLRLGWET*RRLRAGERHWQPRG
Trigger: CCCTCGGGGCTGCCAGTGGCGCTCTCCTGCTCTCAGCCTCCGCCAGGTTTCCCATCCTAGGCGGAGGCGGGCAGGGGCGACTGCTGTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000560657.1
ENST00000561050.5
ENST00000642552.1
ENST00000642758.1
ENST00000643521.1
ENST00000645536.1
ENST00000647090.1
CDS CCA 90 bp AGGTCCGAGGGAGGTATCGCAGGCCAGGGCGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGCGGGGTGGCCAGGAACCGAGCGGAG +
Preference number: 5 (lower is better)
Translates to: RSEGGIAGQGGTMRP*HLGRGCGVARNRAE
Trigger: CTCCGCTCGGTTCCTGGCCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACCGCCCTGGCCTGCGATACCTCCCTCGGACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000561286.5
ENST00000644466.1
ENST00000644679.1
ENST00000646542.1
CDS TCA 90 bp GTCCCCAGGGCCCTGCTGCCTCTCGAAGTACCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCGAGGGAGGTATCGCAGGCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: VPRALLPLEVPWGAG*EPVRGPREVSQARA
Trigger: CGCCCTGGCCTGCGATACCTCCCTCGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000561286.5
ENST00000644466.1
ENST00000644679.1
ENST00000646542.1
CDS CCA 90 bp GAGGCTGGACCCACAGCAGTCGCCCCTGCCCGCCTCCGCCTAGGATaGGAAACCTGGCGGAGGCTGAGAGCAGGAGAGCGCCACTGGCAG +
Preference number: 5 (lower is better)
Translates to: EAGPTAVAPARLRLG*ETWRRLRAGERHWQ
Trigger: CTGCCAGTGGCGCTCTCCTGCTCTCAGCCTCCGCCAGGTTTCCCATCCTAGGCGGAGGCGGGCAGGGGCGACTGCTGTGGGTCCAGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000560657.1
ENST00000561050.5
ENST00000642552.1
ENST00000642758.1
ENST00000643521.1
ENST00000645536.1
ENST00000647090.1
CDS TCA 90 bp GTCCCCAGGGCCCTGCTGCCTCTCGAAGTACCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCGAGGGAGGTATCTGGTAGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: VPRALLPLEVPWGAG*EPVRGPREVSGRAG
Trigger: GCCAGCCCTACCAGATACCTCCCTCGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560736.5
ENST00000642858.1
CDS-3UTR CAA 90 bp CCACAGCTCGCTGGAAATCAGCTGGGGACATCCAGTTGCCCAGCTGCCCACGGGGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: PQLAGNQLGTSSCPAAHGAGDIQ*PSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGC...CCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS TCA 90 bp GTCCCCAGGGCCCTGCTGCCTCTCGAAGTACCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCGAGGGAGGTATCTGGGAAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: VPRALLPLEVPWGAG*EPVRGPREVSGKER
Trigger: CCTTTCCTTCCCAGATACCTCCCTCGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGGTACTTCGAGAGGCAGCAGGGCCCTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000561050.5
ENST00000642552.1
ENST00000642758.1
ENST00000643521.1
ENST00000645536.1
CDS-3UTR CAA 90 bp CGAATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: RMPVGSWPRSPLSTRRVWAGDIQ*PSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGC...CCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS GCA 90 bp GCCACAGGCACTAGGGAAGGCGGCTGCCACATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAGGATCTTGTCCTGTCAGGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: ATGTREGGCHIALLP*RAGDAQDLVLSGAG
Trigger: GCCAGCCCCTGACAGGACAAGATCCTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGTGCCTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561050.5
ENST00000643521.1
CDS-3UTR CAA 90 bp CCCCACCAGGCGGGAGTGGTACCGTGTCCCGCTGAGAAGGAGTTACAATCACCGACTCGTGCCACATCCTaGGGGTCTGTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PHQAGVVPCPAEKELQSPTRATS*GSVRAS
Trigger: GCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGT...CGGTGATTGTAACTCCTTCTCAGCGGGACACGGTACCACTCCCGCCTGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS GCA 90 bp GCCACAGGCACTAGGGAAGGCGGCTGCCACATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAGGATCAGCATGTGCTCTGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: ATGTREGGCHIALLP*RAGDAQDQHVLCQP
Trigger: TGGCTGGCAGAGCACATGCTGATCCTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGTGCCTGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
ENST00000645709.1
CDS CCA 90 bp CCACCCACAAGGGCTGCCCAAGTGGAACGGGCTGTGCGACAGATGTaGGTCACTTCCGACTCTGGGACAAAAGCCTTGTCCCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: PPTRAAQVERAVRQM*VTSDSGTKALSPGP
Trigger: GGGCCCTGGGGACAAGGCTTTTGTCCCAGAGTCGGAAGTGACCCACATCTGTCGCACAGCCCGTTCCACTTGGGCAGCCCTTGTGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CAA 90 bp AGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: SQHLFGQILVDLLCQVAPAGDIQ*PSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGC...CGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp AGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCGCTCACTGGCTCCCCTaGTCCTGTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RASGHILCTRLSRASSSAAHWLP*SCQGLA
Trigger: GGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGC...GGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp ACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTGCTCACTGGCTCCCCTaGTCCTGTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: TGLLVTRFPGFAQPGGHSAHWLP*SCQGLA
Trigger: GGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGC...ACTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp CCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATGATGGCCAGCCCAAGGGGATGCCAGTTAAGCCCTaGTCCCCAGGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PLSTRRVWMLRHDGQPKGMPVKP*SPGPCC
Trigger: GCAGCAGGGCCCTGGGGACAAGGGCTTAACTGGCAT...CCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGCGGGCCAGCCAGCCTaGTCCCCAGGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPAGQPA*SPGPCC
Trigger: GCAGCAGGGCCCTGGGGACAAGGCTGGCTGGCCCGC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561286.5
ENST00000644679.1
CDS-3UTR CAA 90 bp CTAAGCACTCGCAGGGTCTGGATGCTACGGCATGATGGCCAGCCCAAGGGGCTCAGCCCCCACACCCTCTaGCAGCCCTCTAAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: LSTRRVWMLRHDGQPKGLSPHTL*QPSKWD
Trigger: GTCCCACTTAGAGGGCTGCAAGAGGGTGTGGGGGCT...GAGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS TCA 90 bp GCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATaGTGGCCAGCCCAAGGGGCTCAGCCCATGCCAGTTAAGCCGCAG +
Preference number: 5 (lower is better)
Translates to: AQISTKHSQGLDATA*WPAQGAQPMPVKPQ
Trigger: CTGCGGCTTAACTGGCATGGGCTGAGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000645217.2
ENST00000645709.1
CDS TCA 90 bp GCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATaGTGGCCAGCCCAAGGGGCTCAGCCCATGCCAGTTAAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: AQISTKHSQGLDATA*WPAQGAQPMPVKPG
Trigger: GCCAGGCTTAACTGGCATGGGCTGAGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560657.1
ENST00000647090.1
CDS CCA 90 bp GATGATCTCCCGCTGGTCGGGCACGTGGCCAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCTCACTGGCTCCCCTTGTCCTGTCAG +
Preference number: 5 (lower is better)
Translates to: DDLPLVGHVANQGFL*VARPLAHWLPLSCQ
Trigger: CTGACAGGACAAGGGGAGCCAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCGGGAGATCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000559503.1
ENST00000560736.5
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000642858.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645466.1
ENST00000645536.1
ENST00000645709.1
CDS-3UTR CAA 90 bp CTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCAGCGTGGATGCCCTCTGGTaGGCACAGGCGGGCACTGTG +
Preference number: 5 (lower is better)
Translates to: LSDEALLLQQGQCGSILSVDALW*AQAGTV
Trigger: CACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCAC...GCTGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CAA 90 bp TCGAATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGACTCGTGCCACATCCTaGGGGTCTGTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SNASGKLAQISTKHSQGLTRATS*GSVRAS
Trigger: GCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGT...CAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560106.5
ENST00000644466.1
CDS-3UTR CAA 90 bp GGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACTCGTGCCACATCCTaGGGGTCTGTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GPQVTFCAHVSPGPQAQPTRATS*GSVRAS
Trigger: GCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGT...TGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp GCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: ARLGPQVTFCAHVSPGPQAGDIQ*PSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGC...TTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGCGGGCCAGCCAGCCTaGTCCCCAGGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLAGQPA*SPGPCC
Trigger: GCAGCAGGGCCCTGGGGACAAGGCTGGCTGGCCCGC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561286.5
ENST00000644679.1
CDS TCA 90 bp TCTTGCCCAGCAGGGAGTTGCCACCATAGCCGCTGCCGAAGGAGATaGTCTCCCGCTGGTCGGGCACGTGGCCAATCAGGGTTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SCPAGSCHHSRCRRR*SPAGRARGQSGFSL
Trigger: CAGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCGGCTATGGTGGCAACTCCCTGCTGGGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000559503.1
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645466.1
ENST00000645536.1
ENST00000645709.1
CDS TCA 90 bp GCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATaGTGGCCAGCCCAAGGGGCTCAGCCCATGCCAGTTAAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: AQISTKHSQGLDATA*WPAQGAQPMPVKPL
Trigger: CAAGGGCTTAACTGGCATGGGCTGAGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000560106.5
ENST00000560736.5
ENST00000561050.5
ENST00000642552.1
ENST00000642758.1
ENST00000642858.1
ENST00000643521.1
ENST00000644466.1
ENST00000645536.1
CDS TCA 90 bp GCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATaGTGGCCAGCCCAAGGGGCTCAGCCCATGCCAGTTAAGCCCATC +
Preference number: 5 (lower is better)
Translates to: AQISTKHSQGLDATA*WPAQGAQPMPVKPI
Trigger: GATGGGCTTAACTGGCATGGGCTGAGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS TCA 90 bp GCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATaGTGGCCAGCCCAAGGGGCTCAGCCCATGCCAGTTAAGCCTGGT +
Preference number: 5 (lower is better)
Translates to: AQISTKHSQGLDATA*WPAQGAQPMPVKPG
Trigger: ACCAGGCTTAACTGGCATGGGCTGAGCCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559837.5
ENST00000644626.1
CDS CCA 90 bp GGTGTCTATAGCTCTGAGGCCGCTGAGATCCAAGGCTCCTTCCTTTaGCACCAGCCCAATGGGTGTCTCTCGGGCACTGTCCTCCCCCTC +
Preference number: 5 (lower is better)
Translates to: GVYSSEAAEIQGSFL*HQPNGCLSGTVLPL
Trigger: GAGGGGGAGGACAGTGCCCGAGAGACACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTGGATCTCAGCGGCCTCAGAGCTATAGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS CCA 90 bp TGGTTACCCTGCATGCAGCCTGGAAACCTCTCATCCACAGCTCGCTaGAAATCAGCTGGGGACATCCAGTTGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: WLPCMQPGNLSSTAR*KSAGDIQLPSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGCTGATTTCCAGCGAGCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGTAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558674.5
ENST00000642552.1
CDS-3UTR CAA 90 bp GCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACTCGTGCCACATCCTaGGGGTCTGTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ASGHILCTRLSRASSSANTRATS*GSVRAS
Trigger: GCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGT...GTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQAGDIQ*PSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPAGDIQ*PSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCA +
Preference number: 5 (lower is better)
Translates to: HRAPCHQVSRVCPARRSQAMALG*VVAEVP
Trigger: TGGTACCTCTGCCACCACCAATCCCAACGCCATGGC...CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGGCAGCTGGGCCCCCTaGCGCCCTTCCATGCTCAGC +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPGSWAP*RPSMLS
Trigger: GCTGAGCATGGAAGGGCGCAAGGGGGCCCAGCTGCC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGGCAGCTGGGCCCCCTaGCGCCCTTCCATGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGGSWAP*RPSMLS
Trigger: GCTGAGCATGGAAGGGCGCAAGGGGGCCCAGCTGCC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGGCAGCTGGGCCCCCTaGCGCCCTTCCATGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQGSWAP*RPSMLS
Trigger: GCTGAGCATGGAAGGGCGCAAGGGGGCCCAGCTGCC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TCGAATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGAGCCCCCACACCCTCTaGCAGCCCTCTAAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: SNASGKLAQISTKHSQGLSPHTL*QPSKWD
Trigger: GTCCCACTTAGAGGGCTGCAAGAGGGTGTGGGGGCT...CAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS TCA 90 bp CAGGATCTTGTCCTGTCAGGGGCTGGCCCACGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCAGGGCCTGAAGCACAGGTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: QDLVLSGAGPRSADT*QSHHLPGPEAQVSP
Trigger: TGGGGACACCTGTGCTTCAGGCCCTGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACAAGATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561050.5
ENST00000643521.1
CDS GCA 90 bp AGGCATCCCCTGGATGAAGGGTTCCAAACCTGTTCACATCTTCCGTaGCCTTGCCACTGTGCCCCTGCCCTGGTTACCCTGCATGCAGCC +
Preference number: 5 (lower is better)
Translates to: RHPLDEGFQTCSHLP*PCHCAPALVTLHAA
Trigger: GGCTGCATGCAGGGTAACCAGGGCAGGGGCACAGTGGCAAGGGCACGGAAGATGTGAACAGGTTTGGAACCCTTCATCCAGGGGATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558674.5
ENST00000642552.1
CDS-3UTR CAA 90 bp CCACTAAGCACTCGCAGGGTCTGGATGCTACGGCATGATGGCCAGCCCAAGGGGGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: PLSTRRVWMLRHDGQPKGASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...CCCCTTGGGCTGGCCATCATGCCGTAGCATCCAGACCCTGCGAGTGCTTAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLAGDIQ*PSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARAGDIQ*PSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGC...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGCTCACTGGCTCCCCTaGTCCTGTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQAHWLP*SCQGLA
Trigger: GGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTACCAGGGGCAAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: LWIVAMALGLVVAEVPGAKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...TGCCCCTGGTACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp GGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: GPQVTFCAHVSPGPQAQPKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...TGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp GCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATTGGCCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: AGQCPPSTRHHHWSQPHWPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...CCAATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp CTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTACCAGGGGCACCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: LWIVAMALGLVVAEVPGAPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...TGCCCCTGGTACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp GGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAAACCAGGGGTACCCCTTaGGGTCTGCGGCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: GLRSHFVHTSLQGLKLSQTRGTP*GLRPPK
Trigger: CTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGGT...TTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGCAGCTGGGCCCCCTaGCGCCCTTCCATGCTCAGC +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLGSWAP*RPSMLS
Trigger: GCTGAGCATGGAAGGGCGCAAGGGGGCCCAGCTGCC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS GCA 90 bp CCCCTGGATGAAGGGTTCCAAACCTGTTCACATCTTCCGTGCCCTTaGCACTGTGCCCCTGCCCTGGTTACCCTGCATGCAGCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: PLDEGFQTCSHLPCP*HCAPALVTLHAAWK
Trigger: TTTCCAGGCTGCATGCAGGGTAACCAGGGCAGGGGCACAGTGGCAAGGGCACGGAAGATGTGAACAGGTTTGGAACCCTTCATCCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558674.5
ENST00000642552.1
CDS CCA 90 bp AAACCTGTTCACATCTTCCGTGCCCTTGCCACTGTGCCCCTGCCCTaGTTACCCTGCATGCAGCCTGGAAACCTCTCATCCACAGCTCGC +
Preference number: 5 (lower is better)
Translates to: KPVHIFRALATVPLP*LPCMQPGNLSSTAR
Trigger: GCGAGCTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGTAACCAGGGCAGGGGCACAGTGGCAAGGGCACGGAAGATGTGAACAGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558674.5
ENST00000642552.1
CDS-3UTR CAA 90 bp TTGGGGAGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTAGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: LGSFRMRPCCSSRVSVAVASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...TACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCTCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGACTCGTGCCACATCCTaGGGGTCTGTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQTRATS*GSVRAS
Trigger: GCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCAGDIQ*PSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGC...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: LRFCLGLETANVHDFCASAGDIQ*PSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGC...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCGCTCACTGGCTCCCCTaGTCCTGTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGAHWLP*SCQGLA
Trigger: GGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGC...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGCTCACTGGCTCCCCTaGTCCTGTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLAHWLP*SCQGLA
Trigger: GGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAGCTCACTGGCTCCCCTaGTCCTGTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARAHWLP*SCQGLA
Trigger: GGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGC...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp TGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGCTCACTGGCTCCCCTaGTCCTGTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: CPLARLGPQVTFCAHVSPAHWLP*SCQGLA
Trigger: GGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGC...TGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp ACCCCAAAGAAGCCGTTCTCAGGGTTGATGGCCCGGAGTCGACCTTCACTGTCAGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCA +
Preference number: 5 (lower is better)
Translates to: TPKKPFSGLMARSRPSLSAMALG*VVAEVP
Trigger: TGGTACCTCTGCCACCACCAATCCCAACGCCATGGC...TGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp CACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGATTGTAGCCATGGCGTaGGGATTGGTGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: HRAPCHQVSRVCPARRSQIVAMA*GLVVAE
Trigger: CTCTGCCACCACCAATCCCAACGCCATGGCTACAAT...CTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp CAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTATGTGCACAGGGCTCCTaGTCACCAGGTTTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: QGSLSPGFQGLPSQEVTVCAQGS*SPGFQG
Trigger: ACCCTGGAAACCTGGTGACAAGGAGCCCTGTGCACA...TACTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp TTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGTGGGAAGCTGTCTGGGACAAAAGCCTaGTCCCCAGGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LAQAGTVLYKISNASGKLSGTKA*SPGPCC
Trigger: GCAGCAGGGCCCTGGGGACAAGGCTTTTGTCCCAGA...CAGCTTCCCACTGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS TCA 90 bp CCCACGGAGTGCAGACACTTGACAAAGTCACCATCTCCCAGGGCCTaGAGCACAGGTGTCCCCAGTCGGGTCATAATACGCATGCTTGCC +
Preference number: 5 (lower is better)
Translates to: PTECRHLTKSPSPRA*STGVPSRVIIRMLA
Trigger: GGCAAGCATGCGTATTATGACCCGACTGGGGACACCTGTGCTTCAGGCCCTGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000559503.1
ENST00000559837.5
ENST00000560736.5
ENST00000561050.5
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000642858.1
ENST00000643521.1
ENST00000644626.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645466.1
ENST00000645536.1
ENST00000645709.1
CDS GCA 90 bp TCCTTCAGAGACCACCCACAAGGGCTGCCCAAGTGGAACGGGCTGTaGGACAGATGTGGGTCACTTCCGACTCTGGGACAAAAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: SFRDHPQGLPKWNGL*DRCGSLPTLGQKPC
Trigger: ACAAGGCTTTTGTCCCAGAGTCGGAAGTGACCCACATCTGTCGCACAGCCCGTTCCACTTGGGCAGCCCTTGTGGGTGGTCTCTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS GCA 90 bp GTTCCAAACCTGTTCACATCTTCCGTGCCCTTGCCACTGTGCCCCTaGCCTGGTTACCCTGCATGCAGCCTGGAAACCTCTCATCCACAG +
Preference number: 5 (lower is better)
Translates to: VPNLFTSSVPLPLCP*PGYPACSLETSHPQ
Trigger: CTGTGGATGAGAGGTTTCCAGGCTGCATGCAGGGTAACCAGGGCAGGGGCACAGTGGCAAGGGCACGGAAGATGTGAACAGGTTTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558674.5
ENST00000642552.1
CDS-3UTR CAA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTGTGGATGCCCTCTGGTaGGCACAGGCGGGCACTGTG +
Preference number: 5 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSVDALW*AQAGTV
Trigger: CACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCAC...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGTGGATGCCCTCTGGTaGGCACAGGCGGGCACTGTG +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLVDALW*AQAGTV
Trigger: CACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCAC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp AGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: RASGHILCTRLSRASSSAASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...GGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAACTCGTGCCACATCCTaGGGGTCTGTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARTRATS*GSVRAS
Trigger: GCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGT...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCACTCGTGCCACATCCTaGGGGTCTGTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGTRATS*GSVRAS
Trigger: GCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGT...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAACTCGTGCCACATCCTaGGGGTCTGTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLTRATS*GSVRAS
Trigger: GCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCGCTCACTGGCTCCCCTaGTCCTGTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSAHWLP*SCQGLA
Trigger: GGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGC...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp TGTCAAACCTCATCCAAGCAATATCATCCCCCACACACTCCACTTTCCAGCCTGGCTCACTGGCTCCCCTaGTCCTGTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: CQTSSKQYHPPHTPLSSLAHWLP*SCQGLA
Trigger: GGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGC...CAGGCTGGAAAGTGGAGTGTGTGGGGGATGATATTGCTTGGATGAGGTTTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp GAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATCGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: EAGQCPPSTRHHHWSQPHRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...ATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp GCTGGTCAATGCCCTCCCAGTACACGCCACCATCACTGGTCTCAGCCACATTGGCGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: AGQCPPSTRHHHWSQPHWRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...CCAATGTGGCTGAGACCAGTGATGGTGGCGTGTACTGGGAGGGCATTGACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp CCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: PYSQMRVLCPLARLGPQVKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...GACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp CCCAAAGAAGCCGTTCTCAGGGTTGATGGCCCGGAGTCGACCTTCACTGTCAAAAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: PKEAVLRVDGPESTFTVKKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...TTTGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp CTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCA +
Preference number: 5 (lower is better)
Translates to: LRSHFVHTSLQGLKLSQHAMALG*VVAEVP
Trigger: TGGTACCTCTGCCACCACCAATCCCAACGCCATGGC...GTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp ACAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTATTGTAGCCATGGCGTaGGGATTGGTGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: TGLLVTRFPGFAQPGGHSIVAMA*GLVVAE
Trigger: CTCTGCCACCACCAATCCCAACGCCATGGCTACAAT...ACTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp CTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACCCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: LRSHFVHTSLQGLKLSQHPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...GTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGACCAGGGGTACCCCTTaGGGTCTGCGGCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQTRGTP*GLRPPK
Trigger: CTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGGT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTACCAGGGGTACCCCTTaGGGTCTGCGGCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPTRGTP*GLRPPK
Trigger: CTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGGT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTGGCAGCTGGGCCCCCTaGCGCCCTTCCATGCTCAGC +
Preference number: 5 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSGSWAP*RPSMLS
Trigger: GCTGAGCATGGAAGGGCGCAAGGGGGCCCAGCTGCC...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGATGCCAGTTAAGCCCTaGTCCCCAGGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQMPVKP*SPGPCC
Trigger: GCAGCAGGGCCCTGGGGACAAGGGCTTAACTGGCAT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGATGCCAGTTAAGCCCTaGTCCCCAGGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGMPVKP*SPGPCC
Trigger: GCAGCAGGGCCCTGGGGACAAGGGCTTAACTGGCAT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTATGCCAGTTAAGCCCTaGTCCCCAGGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPMPVKP*SPGPCC
Trigger: GCAGCAGGGCCCTGGGGACAAGGGCTTAACTGGCAT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000642758.1
ENST00000645536.1
CDS-3UTR CAA 90 bp AGCCTGGGTCTGTTCCTGCCTCAGAGGGAAGTTCTCCGTGAGCATCAGTTTTCATCTGGGACAAAAGCCTaGTCCCCAGGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SLGLFLPQREVLREHQFSSGTKA*SPGPCC
Trigger: GCAGCAGGGCCCTGGGGACAAGGCTTTTGTCCCAGA...TGAAAACTGATGCTCACGGAGAACTTCCCTCTGAGGCAGGAACAGACCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS CCA 90 bp GTCCGAGGGAGGTATCTGGGAAGGAAAGGAGGATATGCGGAGACCTaGCTCAGCAGAGAGGAGCGAGGAGAGAGAGGAAGTTCTGAGAGT +
Preference number: 5 (lower is better)
Translates to: VRGRYLGRKGGYAET*LSREERGERGSSES
Trigger: ACTCTCAGAACTTCCTCTCTCTCCTCGCTCCTCTCTGCTGAGCCAGGTCTCCGCATATCCTCCTTTCCTTCCCAGATACCTCCCTCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000561050.5
ENST00000642552.1
ENST00000642758.1
ENST00000643521.1
ENST00000645536.1
CDS CCA 90 bp TGTAAGACCAAAGAAGGTCCTGCTCCACCCACCCCTGTCCTGAGATaGACCCAAGATCTGATGAGGAAAGGCTGTCTCTCGGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: CKTKEGPAPPTPVLR*TQDLMRKGCLSGGW
Trigger: CCAGCCACCCGAGAGACAGCCTTTCCTCATCAGATCTTGGGTCCATCTCAGGACAGGGGTGGGTGGAGCAGGACCTTCTTTGGTCTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558674.5
ENST00000561050.5
ENST00000642552.1
ENST00000643521.1
CDS-3UTR CAA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCGTGGATGCCCTCTGGTaGGCACAGGCGGGCACTGTG +
Preference number: 5 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSVDALW*AQAGTV
Trigger: CACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCAC...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCACTCGTGCCACATCCTaGGGGTCTGTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCTRATS*GSVRAS
Trigger: GCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTACCAGGGGCAACGGAGTGCAGACACTaGACAAAGTCACCATCTCCC +
Preference number: 5 (lower is better)
Translates to: LWIVAMALGLVVAEVPGATECRH*TKSPSP
Trigger: GGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGT...TGCCCCTGGTACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp CAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTAACGGAGTGCAGACACTaGACAAAGTCACCATCTCCC +
Preference number: 5 (lower is better)
Translates to: QGSLSPGFQGLPSQEVTVTECRH*TKSPSP
Trigger: GGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGT...TACTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTGCTCACTGGCTCCCCTaGTCCTGTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSAHWLP*SCQGLA
Trigger: GGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGC...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp AGTAACACCAGGTGGAAGAGGCTGGTCAATGCCCTCCCAGTACACGCCACCATCATAGCCAGGTTGGTCTaGCCACAGGCACTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: SNTRWKRLVNALPVHATIIARLV*PQALGK
Trigger: CTTCCCTAGTGCCTGTGGCAAGACCAACCTGGCTAT...GATGGTGGCGTGTACTGGGAGGGCATTGACCAGCCTCTTCCACCTGGTGTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCA +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGAMALG*VVAEVP
Trigger: TGGTACCTCTGCCACCACCAATCCCAACGCCATGGC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCA +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPAMALG*VVAEVP
Trigger: TGGTACCTCTGCCACCACCAATCCCAACGCCATGGC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGAATCCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: QHLFGQILVDLLCQVAPNPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...ATTCGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CTCAAGCTCAGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGTGTGCACAGGGCTCCTaGTCACCAGGTTTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: LKLSQHLFGQILVDLLCQCAQGS*SPGFQG
Trigger: ACCCTGGAAACCTGGTGACAAGGAGCCCTGTGCACA...CTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGAGCTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp ACCCCAAAGAAGCCGTTCTCAGGGTTGATGGCCCGGAGTCGACCTTCACTGTCAGCACAAAATCGAGAGTaGGGATGTGCACAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: TPKKPFSGLMARSRPSLSAQNRE*GCAQGS
Trigger: GGAGCCCTGTGCACATCCCAACTCTCGATTTTGTGC...TGACAGTGAAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAACCAGGGGTACCCCTTaGGGTCTGCGGCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLTRGTP*GLRPPK
Trigger: CTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGGT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCCAAGGCTCCTTCCTTaGGCACCAGCCCAATGGGTG +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPPRLLP*APAQWV
Trigger: CACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTGG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp AGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCGTTCCCAGAAGTCCTTaGTGTTCTGCTGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: RASGHILCTRLSRASSSAVPRSP*CSAAAV
Trigger: CACTGCTGCAGCAGAACACAAAGGACTTCTGGGAAC...GGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS TCA 90 bp AGATGGTTGGAGGTTGTGGAGAAAGCTTTTCCACCATTAAGGTGCTaGGGCCTGGAGGCTGTGCCACACCTTCCCCACCGCACATACCAG +
Preference number: 5 (lower is better)
Translates to: RWLEVVEKAFPPLRC*GLEAVPHLPHRTYQ
Trigger: CTGGTATGTGCGGTGGGGAAGGTGTGGCACAGCCTCCAGGCCTCAGCACCTTAATGGTGGAAAAGCTTTCTCCACAACCTCCAACCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396973.8
ENST00000558674.5
ENST00000642552.1
ENST00000645709.1
CDS TCA 90 bp TGGCAGAGGTACCAGGGGCAACCCCAAAGAAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTGTTAGGAGAAGTGAAAGAAAGGAAG +
Preference number: 5 (lower is better)
Translates to: WQRYQGQPQRSRSQG*WPGVDLLGEVKERK
Trigger: CTTCCTTTCTTTCACTTCTCCTAACAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGTTGCCCCTGGTACCTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558674.5
ENST00000561050.5
ENST00000642552.1
ENST00000643521.1
CDS-3UTR CAA 90 bp CCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGTCGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: PYSQMRVLCPLARLGPQVASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...GACCTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp GTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: VDALWLAQAGTVLYKISNASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...ATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CAA 90 bp ATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAATCTCGAATGCCAGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: MPSGWHRRALCSTKSRMPASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...TGGCATTCGAGATTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CAA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTACTCGTGCCACATCCTaGGGGTCTGTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSTRATS*GSVRAS
Trigger: GCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGT...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp TCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACCATAGCCAGGTTGGTCTaGCCACAGGCACTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: SGHILCTRLSRASSSANTIARLV*PQALGK
Trigger: CTTCCCTAGTGCCTGTGGCAAGACCAACCTGGCTAT...GGTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp GCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAACGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: ARLGPQVTFCAHVSPGPQRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...TTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCA +
Preference number: 5 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGAMALG*VVAEVP
Trigger: TGGTACCTCTGCCACCACCAATCCCAACGCCATGGC...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCA +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLAMALG*VVAEVP
Trigger: TGGTACCTCTGCCACCACCAATCCCAACGCCATGGC...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCA +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARAMALG*VVAEVP
Trigger: TGGTACCTCTGCCACCACCAATCCCAACGCCATGGC...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTCAAGCTCAGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGATTGTAGCCATGGCGTaGGGATTGGTGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LKLSQHLFGQILVDLLCQIVAMA*GLVVAE
Trigger: CTCTGCCACCACCAATCCCAACGCCATGGCTACAAT...CTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGAGCTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTGTGCACAGGGCTCCTaGTCACCAGGTTTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPCAQGS*SPGFQG
Trigger: ACCCTGGAAACCTGGTGACAAGGAGCCCTGTGCACA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTGTGCACAGGGCTCCTaGTCACCAGGTTTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQCAQGS*SPGFQG
Trigger: ACCCTGGAAACCTGGTGACAAGGAGCCCTGTGCACA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACAGCACAAAATCGAGAGTaGGGATGTGCACAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: PQVTFCAHVSPGPQAQPTAQNRE*GCAQGS
Trigger: GGAGCCCTGTGCACATCCCAACTCTCGATTTTGTGC...TGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp TCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACCGCACAAAATCGAGAGTaGGGATGTGCACAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: SGHILCTRLSRASSSANTAQNRE*GCAQGS
Trigger: GGAGCCCTGTGCACATCCCAACTCTCGATTTTGTGC...GGTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCACCAGGGGTACCCCTTaGGGTCTGCGGCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSTRGTP*GLRPPK
Trigger: CTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGGT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCACCAGGGGTACCCCTTaGGGTCTGCGGCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCTRGTP*GLRPPK
Trigger: CTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGGT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGGCAGCTGGGCCCCCTaGCGCCCTTCCATGCTCAGC +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVGSWAP*RPSMLS
Trigger: GCTGAGCATGGAAGGGCGCAAGGGGGCCCAGCTGCC...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTCACGCCGGAACCAGTaGACATGGAAGATACGGGGC +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQSRRNQ*TWKIRG
Trigger: GCCCCGTATCTTCCATGTCAACTGGTTCCGGCGTGA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTCACGCCGGAACCAGTaGACATGGAAGATACGGGGC +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGSRRNQ*TWKIRG
Trigger: GCCCCGTATCTTCCATGTCAACTGGTTCCGGCGTGA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACCAAGGCTCCTTCCTTaGGCACCAGCCCAATGGGTG +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARPRLLP*APAQWV
Trigger: CACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTGG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACCAAGGCTCCTTCCTTaGGCACCAGCCCAATGGGTG +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLPRLLP*APAQWV
Trigger: CACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTGG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGAGCCCATCTCTCCCATaGGAGGACTGGGTCCACTCT +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQSPSLP*EDWVHS
Trigger: AGAGTGGACCCAGTCCTCCAATGGGAGAGATGGGCT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp AGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGCAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: SQHLFGQILVDLLCQVAPQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...CGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp AATGCCAGTGGGAAGCTGGCCCAGATCTCCACTAAGCACTCGCAGGGTCTGGATCAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: NASGKLAQISTKHSQGLDQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...ATCCAGACCCTGCGAGTGCTTAGTGGAGATCTGGGCCAGCTTCCCACTGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CAA 90 bp AGCTTTCGGATGAGGCCCTGCTGCTCCAGCAGGGTCAGTGTGGCAGTATTCTCACAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: SFRMRPCCSSRVSVAVFSQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...TGAGAATACTGCCACACTGACCCTGCTGGAGCAGCAGGGCCTCATCCGAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CAA 90 bp GGCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: GLRSHFVHTSLQGLKLSQQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...TTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGAGDIQ*PSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGC...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGCTCACTGGCTCCCCTaGTCCTGTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVAHWLP*SCQGLA
Trigger: GGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGC...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGATAGCCAGGTTGGTCTaGCCACAGGCACTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQIARLV*PQALGK
Trigger: CTTCCCTAGTGCCTGTGGCAAGACCAACCTGGCTAT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGATAGCCAGGTTGGTCTaGCCACAGGCACTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGIARLV*PQALGK
Trigger: CTTCCCTAGTGCCTGTGGCAAGACCAACCTGGCTAT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTATAGCCAGGTTGGTCTaGCCACAGGCACTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPIARLV*PQALGK
Trigger: CTTCCCTAGTGCCTGTGGCAAGACCAACCTGGCTAT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCA +
Preference number: 5 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSAMALG*VVAEVP
Trigger: TGGTACCTCTGCCACCACCAATCCCAACGCCATGGC...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCA +
Preference number: 5 (lower is better)
Translates to: LRFCLGLETANVHDFCASAMALG*VVAEVP
Trigger: TGGTACCTCTGCCACCACCAATCCCAACGCCATGGC...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGATTGTAGCCATGGCGTaGGGATTGGTGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQIVAMA*GLVVAE
Trigger: CTCTGCCACCACCAATCCCAACGCCATGGCTACAAT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCCCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: LRFCLGLETANVHDFCASPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGGCACAAAATCGAGAGTaGGGATGTGCACAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGAQNRE*GCAQGS
Trigger: GGAGCCCTGTGCACATCCCAACTCTCGATTTTGTGC...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGGCACAAAATCGAGAGTaGGGATGTGCACAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQAQNRE*GCAQGS
Trigger: GGAGCCCTGTGCACATCCCAACTCTCGATTTTGTGC...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTGCACAAAATCGAGAGTaGGGATGTGCACAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPAQNRE*GCAQGS
Trigger: GGAGCCCTGTGCACATCCCAACTCTCGATTTTGTGC...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTACCAGGGGTACCCCTTaGGGTCTGCGGCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSTRGTP*GLRPPK
Trigger: CTTTGGTGGCCGCAGACCCAAAGGGGTACCCCTGGT...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000559250.5
ENST00000561286.5
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATCACGCCGGAACCAGTaGACATGGAAGATACGGGGC +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLSRRNQ*TWKIRG
Trigger: GCCCCGTATCTTCCATGTCAACTGGTTCCGGCGTGA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGATCACGCCGGAACCAGTaGACATGGAAGATACGGGGC +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARSRRNQ*TWKIRG
Trigger: GCCCCGTATCTTCCATGTCAACTGGTTCCGGCGTGA...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCCAAGGCTCCTTCCTTaGGCACCAGCCCAATGGGTG +
Preference number: 5 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCPRLLP*APAQWV
Trigger: CACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTGG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGTCAGCCAACACCTCTTaGGGCAGATCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGSANTS*GRSWLT
Trigger: GGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGA...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTTCAGCCAACACCTCTTaGGGCAGATCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPSANTS*GRSWLT
Trigger: GGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGA...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGTCAGCCAACACCTCTTaGGGCAGATCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQSANTS*GRSWLT
Trigger: GGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGA...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TCACAGATGTGGATGCCCTCTGGTTGGCACAGGCGGGCACTGTGCTCTACAAAACAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: SQMWMPSGWHRRALCSTKQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...TTTTGTAGAGCACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCACATCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000644466.1
ENST00000646542.1
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTGCTGGGGACATCCAGTaGCCCAGCTGCCCACGGGCC +
Preference number: 5 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLAGDIQ*PSCPRA
Trigger: GGCCCGTGGGCAGCTGGGCAACTGGATGTCCCCAGC...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTACGGAGTGCAGACACTaGACAAAGTCACCATCTCCC +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPTECRH*TKSPSP
Trigger: GGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGACGGAGTGCAGACACTaGACAAAGTCACCATCTCCC +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQTECRH*TKSPSP
Trigger: GGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGACGGAGTGCAGACACTaGACAAAGTCACCATCTCCC +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGTECRH*TKSPSP
Trigger: GGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGAATACGGAGTGCAGACACTaGACAAAGTCACCATCTCCC +
Preference number: 5 (lower is better)
Translates to: QHLFGQILVDLLCQVAPNTECRH*TKSPSP
Trigger: GGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGT...ATTCGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAATAGCCAGGTTGGTCTaGCCACAGGCACTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARIARLV*PQALGK
Trigger: CTTCCCTAGTGCCTGTGGCAAGACCAACCTGGCTAT...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAATAGCCAGGTTGGTCTaGCCACAGGCACTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLIARLV*PQALGK
Trigger: CTTCCCTAGTGCCTGTGGCAAGACCAACCTGGCTAT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCAGTATAGCCAGGTTGGTCTaGCCACAGGCACTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: FAWDWKLQTFMTSVPPGSIARLV*PQALGK
Trigger: CTTCCCTAGTGCCTGTGGCAAGACCAACCTGGCTAT...ACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCACGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: CPLARLGPQVTFCAHVSPRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...TGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGAATTGTAGCCATGGCGTaGGGATTGGTGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARIVAMA*GLVVAE
Trigger: CTCTGCCACCACCAATCCCAACGCCATGGCTACAAT...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAATTGTAGCCATGGCGTaGGGATTGGTGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLIVAMA*GLVVAE
Trigger: CTCTGCCACCACCAATCCCAACGCCATGGCTACAAT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTGTGCACAGGGCTCCTaGTCACCAGGTTTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSCAQGS*SPGFQG
Trigger: ACCCTGGAAACCTGGTGACAAGGAGCCCTGTGCACA...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCACGCCGGAACCAGTaGACATGGAAGATACGGGGC +
Preference number: 5 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSSRRNQ*TWKIRG
Trigger: GCCCCGTATCTTCCATGTCAACTGGTTCCGGCGTGA...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCCAAGGCTCCTTCCTTaGGCACCAGCCCAATGGGTG +
Preference number: 5 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSPRLLP*APAQWV
Trigger: CACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTGG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGATCAGCCAACACCTCTTaGGGCAGATCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARSANTS*GRSWLT
Trigger: GGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGA...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTATCAGCCAACACCTCTTaGGGCAGATCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLSANTS*GRSWLT
Trigger: GGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGA...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp TGTCCTCTTGCTAGACTAGGGCCTCAGGTCACATTTTGTGCACACGTCTCTCCATCAGCCAACACCTCTTaGGGCAGATCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: CPLARLGPQVTFCAHVSPSANTS*GRSWLT
Trigger: GGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGA...TGGAGAGACGTGTGCACAAAATGTGACCTGAGGCCCTAGTCTAGCAAGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCAGCCCATCTCTCCCATaGGAGGACTGGGTCCACTCT +
Preference number: 5 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSSPSLP*EDWVHS
Trigger: AGAGTGGACCCAGTCCTCCAATGGGAGAGATGGGCT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTATGATGATCTTCCCTTaGGGTCTGCGGCCACCAAAG +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPMMIFP*GLRPPK
Trigger: CTTTGGTGGCCGCAGACCCAAAGGGAAGATCATCAT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558096.5
ENST00000642758.1
CDS-3UTR CAA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTGGATGCCCTCTGGTaGGCACAGGCGGGCACTGTG +
Preference number: 5 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGVDALW*AQAGTV
Trigger: CACAGTGCCCGCCTGTGCCAACCAGAGGGCATCCAC...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: LRFCLGLETANVHDFCASASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTACTCGTGCCACATCCTaGGGGTCTGTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGTRATS*GSVRAS
Trigger: GCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCACTCGTGCCACATCCTaGGGGTCTGTGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSTRATS*GSVRAS
Trigger: GCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGT...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGCTCACTGGCTCCCCTaGTCCTGTCAGGGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRAHWLP*SCQGLA
Trigger: GGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGC...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCATAGCCAGGTTGGTCTaGCCACAGGCACTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LRFCLGLETANVHDFCASIARLV*PQALGK
Trigger: CTTCCCTAGTGCCTGTGGCAAGACCAACCTGGCTAT...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp ATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGGTAATAGCCAGGTTGGTCTaGCCACAGGCACTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: IVLLWIVAMALGLVVAEVIARLV*PQALGK
Trigger: CTTCCCTAGTGCCTGTGGCAAGACCAACCTGGCTAT...TACCTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAGTAACACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCATTGTAGCCATGGCGTaGGGATTGGTGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LRFCLGLETANVHDFCASIVAMA*GLVVAE
Trigger: CTCTGCCACCACCAATCCCAACGCCATGGCTACAAT...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp CAGGGCTCCTTGTCACCAGGTTTCCAGGGTTTGCCCAGCCAGGAGGTCACAGTACTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: QGSLSPGFQGLPSQEVTVLVSAT*VKIVLL
Trigger: GAGTAACACTATTTTTACCAATGTGGCTGAGACCAG...TACTGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGGTGACAAGGAGCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp AAAATAGTGTTACTCTGGATTGTAGCCATGGCGTTGGGATTGGTGGTGGCAGAGTGTGCACAGGGCTCCTaGTCACCAGGTTTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: KIVLLWIVAMALGLVVAECAQGS*SPGFQG
Trigger: ACCCTGGAAACCTGGTGACAAGGAGCCCTGTGCACA...CTCTGCCACCACCAATCCCAACGCCATGGCTACAATCCAGAGTAACACTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp CACTGTCAAACCTCATCCAAGCAATATCATCCCCCACACACTCCACTTTCCAGCGCACAAAATCGAGAGTaGGGATGTGCACAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: HCQTSSKQYHPPHTPLSSAQNRE*GCAQGS
Trigger: GGAGCCCTGTGCACATCCCAACTCTCGATTTTGTGC...GCTGGAAAGTGGAGTGTGTGGGGGATGATATTGCTTGGATGAGGTTTGACAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCGCACAAAATCGAGAGTaGGGATGTGCACAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCAQNRE*GCAQGS
Trigger: GGAGCCCTGTGCACATCCCAACTCTCGATTTTGTGC...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCAGCCAACACCTCTTaGGGCAGATCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSSANTS*GRSWLT
Trigger: GGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGA...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS TCA 90 bp GCAGGGTTGGGTGTTCAGGAAACTTTCTCACTGACAAAGTCATTGTaGACACTAGAGAGGAGACCCCGAGGCTCTGACAAGAGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: AGLGVQETFSLTKSL*TLERRPRGSDKSQN
Trigger: GTTCTGGCTCTTGTCAGAGCCTCGGGGTCTCCTCTCTAGTGTTCACAATGACTTTGTCAGTGAGAAAGTTTCCTGAACACCCAACCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558674.5
ENST00000561050.5
ENST00000642552.1
ENST00000643521.1
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GGGAAGTTCTCCGTGAGCATCAGTTTTCAAGCACACAGTCTTGAGGACAGCCTCCAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: GKFSVSISFQAHSLEDSLQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...GAGGCTGTCCTCAAGACTGTGTGCTTGAAAACTGATGCTCACGGAGAACTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS-3UTR CAA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCACGGAGTGCAGACACTaGACAAAGTCACCATCTCCC +
Preference number: 5 (lower is better)
Translates to: LRFCLGLETANVHDFCASTECRH*TKSPSP
Trigger: GGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGT...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCACGGAGTGCAGACACTaGACAAAGTCACCATCTCCC +
Preference number: 5 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSTECRH*TKSPSP
Trigger: GGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGCCATGGCGTTGGGATaGGTGGTGGCAGAGGTACCA +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVAMALG*VVAEVP
Trigger: TGGTACCTCTGCCACCACCAATCCCAACGCCATGGC...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp AGCCAACACCTCTTTGGGCAGATCCTGGTTGACCTGCTCTGTCAGGTAGCTCCGCTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: SQHLFGQILVDLLCQVAPLVSAT*VKIVLL
Trigger: GAGTAACACTATTTTTACCAATGTGGCTGAGACCAG...CGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGATGATGATCTTCCCTTaGTGTTCTGCTGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGMMIFP*CSAAAV
Trigger: CACTGCTGCAGCAGAACACAAAGGGAAGATCATCAT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCCAAGGCTCCTTCCTTaGGCACCAGCCCAATGGGTG +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVPRLLP*APAQWV
Trigger: CACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTGG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTCAGCCAACACCTCTTaGGGCAGATCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSSANTS*GRSWLT
Trigger: GGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGA...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGCCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAATGATGATCTTCCCTTaGTGTTCTGCTGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLMMIFP*CSAAAV
Trigger: CACTGCTGCAGCAGAACACAAAGGGAAGATCATCAT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTCACGCCGGAACCAGTaGACATGGAAGATACGGGGC +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVSRRNQ*TWKIRG
Trigger: GCCCCGTATCTTCCATGTCAACTGGTTCCGGCGTGA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGATTATTGGACAGTCTTaGTGGGAAGGTCTATGGCAC +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGIIGQS*WEGLWH
Trigger: GTGCCATAGACCTTCCCACAAAGACTGTCCAATAAT...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTATTATTGGACAGTCTTaGTGGGAAGGTCTATGGCAC +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPIIGQS*WEGLWH
Trigger: GTGCCATAGACCTTCCCACAAAGACTGTCCAATAAT...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCCTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACAAGCATCTCTTATTATaGGACAGTCTTTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: ASGHILCTRLSRASSSANKHLLL*DSLCGK
Trigger: CTTCCCACAAAGACTGTCCAATAATAAGAGATGCTT...GTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTCAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGATAGCCAGGTTGGTCTaGCCACAGGCACTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVIARLV*PQALGK
Trigger: CTTCCCTAGTGCCTGTGGCAAGACCAACCTGGCTAT...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCT +
Preference number: 5 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRKPFSG*MARSRP
Trigger: AGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTT...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGATTGTAGCCATGGCGTaGGGATTGGTGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVIVAMA*GLVVAE
Trigger: CTCTGCCACCACCAATCCCAACGCCATGGCTACAAT...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp TGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: CLPYSQMRVLCPLARLGPLVSAT*VKIVLL
Trigger: GAGTAACACTATTTTTACCAATGTGGCTGAGACCAG...AGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp AGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: RCLPYSQMRVLCPLARLGLVSAT*VKIVLL
Trigger: GAGTAACACTATTTTTACCAATGTGGCTGAGACCAG...CCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCAGGTTTCCAGGGTTaGCCCAGCCAGGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPGFQG*PSQEVT
Trigger: TGTGACCTCCTGGCTGGGCAAACCCTGGAAACCTGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGCACAAAATCGAGAGTaGGGATGTGCACAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVAQNRE*GCAQGS
Trigger: GGAGCCCTGTGCACATCCCAACTCTCGATTTTGTGC...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCATGATGATCTTCCCTTaGTGTTCTGCTGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCMMIFP*CSAAAV
Trigger: CACTGCTGCAGCAGAACACAAAGGGAAGATCATCAT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216780.9
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCATGATGATCTTCCCTTaGTGTTCTGCTGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSMMIFP*CSAAAV
Trigger: CACTGCTGCAGCAGAACACAAAGGGAAGATCATCAT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216780.9
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCCAAGGCTCCTTCCTTaGGCACCAGCCCAATGGGTG +
Preference number: 5 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRPRLLP*APAQWV
Trigger: CACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTGG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGTCAGCCAACACCTCTTaGGGCAGATCCTGGTTGACC +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVSANTS*GRSWLT
Trigger: GGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGA...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAATTATTGGACAGTCTTaGTGGGAAGGTCTATGGCAC +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLIIGQS*WEGLWH
Trigger: GTGCCATAGACCTTCCCACAAAGACTGTCCAATAAT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTCAGGTCACATTTTGTGCACACGTCTCTCCAGGGCCTCAAGCTCAGCCAACACAAGCATCTCTTATTATaGGACAGTCTTTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: LRSHFVHTSLQGLKLSQHKHLLL*DSLCGK
Trigger: CTTCCCACAAAGACTGTCCAATAATAAGAGATGCTT...GTGTTGGCTGAGCTTGAGGCCCTGGAGAGACGTGTGCACAAAATGTGACCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp CTGAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCAGTCCTAGAAGATGGTaGGAGGTTGTGGAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: LRFCLGLETANVHDFCASSPRRW*EVVEKA
Trigger: AGCTTTCTCCACAACCTCCAACCATCTTCTAGGACT...GGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp ACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCGCCAGCCAGCAGTTATaGTACTTGGGGAGCTTTCGG +
Preference number: 5 (lower is better)
Translates to: TLIQLMWKLKLREVEQLSASQQL*YLGSFR
Trigger: CCGAAAGCTCCCCAAGTACAATAACTGCTGGCTGGC...GCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGCGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp GATTTTGCCTGGGACTGGAAACTGCAAACGTTCATGACTTCTGTGCCTCCTGGCCTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: DFAWDWKLQTFMTSVPPGLVSAT*VKIVLL
Trigger: GAGTAACACTATTTTTACCAATGTGGCTGAGACCAG...GCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp TCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: SARCLPYSQMRVLCPLARLVSAT*VKIVLL
Trigger: GAGTAACACTATTTTTACCAATGTGGCTGAGACCAG...TCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTACTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLLVSAT*VKIVLL
Trigger: GAGTAACACTATTTTTACCAATGTGGCTGAGACCAG...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS-3UTR CAA 90 bp GGGTTGATGGCCCGGAGTCGACCTTCACTGTCAAACCTCATCCAAGCAATATCACTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: GLMARSRPSLSNLIQAISLVSAT*VKIVLL
Trigger: GAGTAACACTATTTTTACCAATGTGGCTGAGACCAG...TGATATTGCTTGGATGAGGTTTGACAGTGAAGGTCGACTCCGGGCCATCAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS-3UTR CAA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGTGTGCACAGGGCTCCTaGTCACCAGGTTTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRCAQGS*SPGFQG
Trigger: ACCCTGGAAACCTGGTGACAAGGAGCCCTGTGCACA...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGTCACGCCGGAACCAGTaGACATGGAAGATACGGGGC +
Preference number: 5 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRSRRNQ*TWKIRG
Trigger: GCCCCGTATCTTCCATGTCAACTGGTTCCGGCGTGA...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCATTATTGGACAGTCTTaGTGGGAAGGTCTATGGCAC +
Preference number: 5 (lower is better)
Translates to: AHIFCKVPSLFPDEGAMSIIGQS*WEGLWH
Trigger: GTGCCATAGACCTTCCCACAAAGACTGTCCAATAAT...GGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCATTATTGGACAGTCTTaGTGGGAAGGTCTATGGCAC +
Preference number: 5 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCIIGQS*WEGLWH
Trigger: GTGCCATAGACCTTCCCACAAAGACTGTCCAATAAT...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAGGGCCTCAGAAGCATCTCTTATTATaGGACAGTCTTTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: LPYSQMRVLCPLARLGPQKHLLL*DSLCGK
Trigger: CTTCCCACAAAGACTGTCCAATAATAAGAGATGCTT...CTGAGGCCCTAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGGTTCCCAGAAGTCCTTaGTGTTCTGCTGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVVPRSP*CSAAAV
Trigger: CACTGCTGCAGCAGAACACAAAGGACTTCTGGGAAC...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS-3UTR CAA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTACGGAGTGCAGACACTaGACAAAGTCACCATCTCCC +
Preference number: 5 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGTECRH*TKSPSP
Trigger: GGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTCGCATCATAGCCAGGTaGGTCTTGCCACAGGCACTA +
Preference number: 5 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLRIIAR*VLPQAL
Trigger: TAGTGCCTGTGGCAAGACCAACCTGGCTATGATGCG...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGATTGTAGCCATGGCGTaGGGATTGGTGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRIVAMA*GLVVAE
Trigger: CTCTGCCACCACCAATCCCAACGCCATGGCTACAAT...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCCTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: IFCKVPSLFPDEGAMSSCLVSAT*VKIVLL
Trigger: GAGTAACACTATTTTTACCAATGTGGCTGAGACCAG...GCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp GCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTTGCTAGACTAAAGCATCTCTTATTATaGGACAGTCTTTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: ARCLPYSQMRVLCPLARLKHLLL*DSLCGK
Trigger: CTTCCCACAAAGACTGTCCAATAATAAGAGATGCTT...TAGTCTAGCAAGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGATCACAAAACCAACGGAGTGCAGACACTaGACAAAGTCACCATCTCCC +
Preference number: 5 (lower is better)
Translates to: MWKLKLREVEQLSQITKPTECRH*TKSPSP
Trigger: GGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGT...TGGTTTTGTGATCTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGATGATGATCTTCCCTTaGTGTTCTGCTGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVMMIFP*CSAAAV
Trigger: CACTGCTGCAGCAGAACACAAAGGGAAGATCATCAT...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216780.9
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGCAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000642758.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ACTACCCTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTCAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: TTLIQLMWKLKLREVEQLQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...AAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAGGGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp CATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTATGTCCTCTAAGCATCTCTTATTATaGGACAGTCTTTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: HIFCKVPSLFPDEGAMSSKHLLL*DSLCGK
Trigger: CTTCCCACAAAGACTGTCCAATAATAAGAGATGCTT...AGAGGACATAGCACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp CTCATTCAACTGATGTGGAAACTAAAGCTTAGGGAAGTTGAGCAACTTAGCCAGAGTCCTAGAAGATGGTaGGAGGTTGTGGAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: LIQLMWKLKLREVEQLSQSPRRW*EVVEKA
Trigger: AGCTTTCTCCACAACCTCCAACCATCTTCTAGGACT...CTGGCTAAGTTGCTCAACTTCCCTAAGCTTTAGTTTCCACATCAGTTGAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCATTGTAGCCATGGCGTaGGGATTGGTGGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIIVAMA*GLVVAE
Trigger: CTCTGCCACCACCAATCCCAACGCCATGGCTACAAT...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGCTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVLVSAT*VKIVLL
Trigger: GAGTAACACTATTTTTACCAATGTGGCTGAGACCAG...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGATGATGATCTTCCCTTaGTGTTCTGCTGCAGCAGTG +
Preference number: 5 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRMMIFP*CSAAAV
Trigger: CACTGCTGCAGCAGAACACAAAGGGAAGATCATCAT...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216780.9
ENST00000561286.5
ENST00000644679.1
ENST00000645217.2
CDS-3UTR CAA 90 bp TATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTATTATTGGACAGTCTTaGTGGGAAGGTCTATGGCAC +
Preference number: 5 (lower is better)
Translates to: YQIAHIFCKVPSLFPDEGIIGQS*WEGLWH
Trigger: GTGCCATAGACCTTCCCACAAAGACTGTCCAATAAT...ACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGGTGAAGCATCTCTTATTATaGGACAGTCTTTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: IKLLIFSARCLPYSQMRVKHLLL*DSLCGK
Trigger: CTTCCCACAAAGACTGTCCAATAATAAGAGATGCTT...CACCCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCCAGCAGTTATTGTACTaGGGGAGCTTTCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: TLFMHYLILQQSHEIGTIQQLLY*GSFRMR
Trigger: CCTCATCCGAAAGCTCCCCAAGTACAATAACTGCTG...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS-3UTR CAA 90 bp AATATCAAATTGCTCATATTTTCTGCAAGGTGCCTTCCCTATTCCCAGATGAGGAAGCATCTCTTATTATaGGACAGTCTTTGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: NIKLLIFSARCLPYSQMRKHLLL*DSLCGK
Trigger: CTTCCCACAAAGACTGTCCAATAATAAGAGATGCTT...CCTCATCTGGGAATAGGGAAGGCACCTTGCAGAAAATATGAGCAATTTGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
CDS-3UTR CAA 90 bp ACCCTTTTTATGCACTATTTAATCCTCCAACAATCTCATGAGATAGGTACTATCCTGGTCTCAGCCACATaGGTAAAAATAGTGTTACTC +
Preference number: 5 (lower is better)
Translates to: TLFMHYLILQQSHEIGTILVSAT*VKIVLL
Trigger: GAGTAACACTATTTTTACCAATGTGGCTGAGACCAG...GATAGTACCTATCTCATGAGATTGTTGGAGGATTAAATAGTGCATAAAAAGGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS GCA 72 bp GGGAGGTGCAGGCGGAAACGAGGAGCACCGGCCGGCTaGCCTCCCAAGAGACGCGCGGCGCGGGAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: GRCRRKRGAPAG*PPKRRAAREAG
Trigger: TCCAGCCTCCCGCGCCGCGCGTCTCTTGGGAGGGCAGCCGGCCGGTGCTCCTCGTTTCCGCCTGCACCTCCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000560657.1
ENST00000561050.5
ENST00000642552.1
ENST00000642758.1
ENST00000643521.1
ENST00000645536.1
ENST00000647090.1
CDS GCA 72 bp GGTCCGAGGGAGGTATCGCAGGCCAGGGCGGTACAATaGGGCCATGGCACCTGGGCAGGGGCTGCGGGGTGG +
Preference number: 6 (lower is better)
Translates to: GPREVSQARAVQ*GHGTWAGAAGW
Trigger: CCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACCGCCCTGGCCTGCGATACCTCCCTCGGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000561286.5
ENST00000644466.1
ENST00000644679.1
ENST00000646542.1
CDS GCA 72 bp CCCATGCCAGTTAAGCCGCAGGCCAGGGCGGTACAATaGGGCCATGGCACCTGGGCAGGGGCTGCGGGGTGG +
Preference number: 6 (lower is better)
Translates to: PMPVKPQARAVQ*GHGTWAGAAGW
Trigger: CCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACCGCCCTGGCCTGCGGCTTAACTGGCATGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000645217.2
ENST00000645709.1
CDS CCA 72 bp TCACTCACCGCAGGCCAGGGCGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGCGGGGTGGCCAGGAAC +
Preference number: 6 (lower is better)
Translates to: SLTAGQGGTMRP*HLGRGCGVARN
Trigger: GTTCCTGGCCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACCGCCCTGGCCTGCGGTGAGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000545054.6
ENST00000558674.5
ENST00000560657.1
ENST00000561050.5
ENST00000642552.1
ENST00000643521.1
ENST00000645536.1
ENST00000647090.1
CDS CCA 72 bp GTCGCCCCTGCCCGCCTCCGCCTAGGATGGGAAACCTaGCGGAGGCTGAGAGCAGGAGAGCGCCACTGGCAG +
Preference number: 6 (lower is better)
Translates to: VAPARLRLGWET*RRLRAGERHWQ
Trigger: CTGCCAGTGGCGCTCTCCTGCTCTCAGCCTCCGCCAGGTTTCCCATCCTAGGCGGAGGCGGGCAGGGGCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000560657.1
ENST00000561050.5
ENST00000642552.1
ENST00000642758.1
ENST00000643521.1
ENST00000645536.1
ENST00000647090.1
CDS CCA 72 bp GGAGGTATCGCAGGCCAGGGCGGTACAATGCGGCCATaGCACCTGGGCAGGGGCTGCGGGGTGGCCAGGAAC +
Preference number: 6 (lower is better)
Translates to: GGIAGQGGTMRP*HLGRGCGVARN
Trigger: GTTCCTGGCCACCCCGCAGCCCCTGCCCAGGTGCCATGGCCGCATTGTACCGCCCTGGCCTGCGATACCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000561286.5
ENST00000644466.1
ENST00000644679.1
ENST00000646542.1
CDS TCA 72 bp GCCCTGCTGCCTCTCGAAGTACCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCGAGGGAGGTATCTGGG +
Preference number: 6 (lower is better)
Translates to: ALLPLEVPWGAG*EPVRGPREVSG
Trigger: CCCAGATACCTCCCTCGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGGTACTTCGAGAGGCAGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000561050.5
ENST00000642552.1
ENST00000642758.1
ENST00000643521.1
ENST00000645536.1
CDS TCA 72 bp GCCCTGCTGCCTCTCGAAGTACCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCGAGGGAGGTATCGCAG +
Preference number: 6 (lower is better)
Translates to: ALLPLEVPWGAG*EPVRGPREVSQ
Trigger: CTGCGATACCTCCCTCGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGGTACTTCGAGAGGCAGCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000559584.5
ENST00000560106.5
ENST00000561286.5
ENST00000644466.1
ENST00000644679.1
ENST00000646542.1
CDS TCA 72 bp GCAGGGAGTTGCCACCATAGCCGCTGCCGAAGGAGATaGTCTCCCGCTGGTCGGGCACGTGGCCAATCAGGG +
Preference number: 6 (lower is better)
Translates to: AGSCHHSRCRRR*SPAGRARGQSG
Trigger: CCCTGATTGGCCACGTGCCCGACCAGCGGGAGATCATCTCCTTCGGCAGCGGCTATGGTGGCAACTCCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000559503.1
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645466.1
ENST00000645536.1
ENST00000645709.1
CDS TCA 72 bp GCCCTGCTGCCTCTCGAAGTACCCTGGGGCGCTGGCTaGGAGCCCGTTAGAGGTCCGAGGGAGGTATCTGGT +
Preference number: 6 (lower is better)
Translates to: ALLPLEVPWGAG*EPVRGPREVSG
Trigger: ACCAGATACCTCCCTCGGACCTCTAACGGGCTCTCAGCCAGCGCCCCAGGGTACTTCGAGAGGCAGCAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560736.5
ENST00000642858.1
CDS CCA 72 bp CCGCTGGTCGGGCACGTGGCCAATCAGGGTTTTCTCTaGGTTGCACGGCCACTGGCTCACTGGCTCCCCTTG +
Preference number: 6 (lower is better)
Translates to: PLVGHVANQGFL*VARPLAHWLPL
Trigger: CAAGGGGAGCCAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATTGGCCACGTGCCCGACCAGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000559503.1
ENST00000560736.5
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000642858.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645466.1
ENST00000645536.1
ENST00000645709.1
CDS TCA 72 bp CGGCTGCCACATAGCGCTTCTTCCCTGCAGGGCTGGTaGTGCCCAGGATCAGCATGTGCTCTGCCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: RLPHSASSLQGW*CPGSACALPAS
Trigger: GCTGGCTGGCAGAGCACATGCTGATCCTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTATGTGGCAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
ENST00000645709.1
CDS TCA 72 bp CGGCTGCCACATAGCGCTTCTTCCCTGCAGGGCTGGTaGTGCCCAGGATCAGGCCCTCACCAGCATGTGCTC +
Preference number: 6 (lower is better)
Translates to: RLPHSASSLQGW*CPGSGPHQHVL
Trigger: GAGCACATGCTGGTGAGGGCCTGATCCTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTATGTGGCAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559503.1
ENST00000645466.1
CDS GCA 72 bp GGTCGGGCACGTGGCCAATCAGGGTTTTCTCTGGGTTaGACGGCCACTGGCTCACTGGCTCCCCTTGTCCTG +
Preference number: 6 (lower is better)
Translates to: GRARGQSGFSLG*TATGSLAPLVL
Trigger: CAGGACAAGGGGAGCCAGTGAGCCAGTGGCCGTGCAACCCAGAGAAAACCCTGATTGGCCACGTGCCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000559503.1
ENST00000560736.5
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000642858.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645466.1
ENST00000645536.1
ENST00000645709.1
CDS CCA 72 bp CCATGCCAGTTAAGCCCATCTCTCCCATTGGAGGACTaGGTCCACTCTTCGGCCCCCGACTTCGAGGCCCCG +
Preference number: 6 (lower is better)
Translates to: PCQLSPSLPLED*VHSSAPDFEAP
Trigger: CGGGGCCTCGAAGTCGGGGGCCGAAGAGTGGACCCAGTCCTCCAATGGGAGAGATGGGCTTAACTGGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559250.5
ENST00000644897.1
CDS TCA 72 bp GTCCTGTCAGGGGCTGGCCCACGGAGTGCAGACACTTaGCAAAGTCACCATCTCCCAGGGCCTGAAGCACAG +
Preference number: 6 (lower is better)
Translates to: VLSGAGPRSADT*QSHHLPGPEAQ
Trigger: CTGTGCTTCAGGCCCTGGGAGATGGTGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000559503.1
ENST00000559837.5
ENST00000560736.5
ENST00000561050.5
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000642858.1
ENST00000643521.1
ENST00000644626.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645466.1
ENST00000645536.1
ENST00000645709.1
CDS TCA 72 bp GACTCAGAGCGCATGGCGCTGCCCACAAACACCCCATaGCGCCAGTTGAAGGCCTCGTATACCAGGGGTACC +
Preference number: 6 (lower is better)
Translates to: DSERMALPTNTP*RQLKASYTRGT
Trigger: GGTACCCCTGGTATACGAGGCCTTCAACTGGCGTCATGGGGTGTTTGTGGGCAGCGCCATGCGCTCTGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000557969.1
ENST00000559250.5
ENST00000561286.5
ENST00000644361.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS GCA 72 bp ACTAGGGAAGGCGGCTGCCACATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAGGATCAGCATGTGCTC +
Preference number: 6 (lower is better)
Translates to: TREGGCHIALLP*RAGDAQDQHVL
Trigger: GAGCACATGCTGATCCTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
ENST00000645709.1
CDS GCA 72 bp GACCACCCACAAGGGCTGCCCAAGTGGAACGGGCTGTaGGACAGATGTGGGTCACTTCCGACTCTGGGACAA +
Preference number: 6 (lower is better)
Translates to: DHPQGLPKWNGL*DRCGSLPTLGQ
Trigger: TTGTCCCAGAGTCGGAAGTGACCCACATCTGTCGCACAGCCCGTTCCACTTGGGCAGCCCTTGTGGGTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS CCA 72 bp CACTGGCTCACTGGCTCCCCTTGTCCTGTCAGGGGCTaGCCCACGGAGTGCAGACACTTGACAAAGTCACCA +
Preference number: 6 (lower is better)
Translates to: HWLTGSPCPVRG*PTECRHLTKSP
Trigger: TGGTGACTTTGTCAAGTGTCTGCACTCCGTGGGCCAGCCCCTGACAGGACAAGGGGAGCCAGTGAGCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000559503.1
ENST00000559837.5
ENST00000560736.5
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000642858.1
ENST00000644626.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645466.1
ENST00000645536.1
ENST00000645709.1
CDS CCA 72 bp AGCTCTGAGGCCGCTGAGATCCAAGGCTCCTTCCTTTaGCACCAGCCCAATGGGTGTCTCTCGGGCACTGTC +
Preference number: 6 (lower is better)
Translates to: SSEAAEIQGSFL*HQPNGCLSGTV
Trigger: GACAGTGCCCGAGAGACACCCATTGGGCTGGTGCCAAAGGAAGGAGCCTTGGATCTCAGCGGCCTCAGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000645217.2
ENST00000645536.1
CDS TCA 72 bp TCGGGTCATAATACGCATGCTTGCCACCACATAGGCTaGGTCAGTGAGCTGCACCCCGATGCGGGACAGCGG +
Preference number: 6 (lower is better)
Translates to: SGHNTHACHHIG*VSELHPDAGQR
Trigger: CCGCTGTCCCGCATCGGGGTGCAGCTCACTGACTCAGCCTATGTGGTGGCAAGCATGCGTATTATGACCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000559503.1
ENST00000559837.5
ENST00000560736.5
ENST00000561050.5
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000642858.1
ENST00000643521.1
ENST00000644626.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645466.1
ENST00000645536.1
ENST00000645709.1
CDS GCA 72 bp CTGTTCACATCTTCCGTGCCCTTGCCACTGTGCCCCTaGCCTGGTTACCCTGCATGCAGCCTGGAAACCTCT +
Preference number: 6 (lower is better)
Translates to: LFTSSVPLPLCP*PGYPACSLETS
Trigger: AGAGGTTTCCAGGCTGCATGCAGGGTAACCAGGGCAGGGGCACAGTGGCAAGGGCACGGAAGATGTGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558674.5
ENST00000642552.1
CDS GCA 72 bp ACTAGGGAAGGCGGCTGCCACATAGCGCTTCTTCCCTaGAGGGCTGGTGATGCCCAGGATCTTGTCCTGTCA +
Preference number: 6 (lower is better)
Translates to: TREGGCHIALLP*RAGDAQDLVLS
Trigger: TGACAGGACAAGATCCTGGGCATCACCAGCCCTGCAGGGAAGAAGCGCTATGTGGCAGCCGCCTTCCCTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561050.5
ENST00000643521.1
CDS CCA 72 bp AGGGCTGCCCAAGTGGAACGGGCTGTGCGACAGATGTaGGTCACTTCCGACTCTGGGACAAAAGCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: RAAQVERAVRQM*VTSDSGTKALS
Trigger: GGACAAGGCTTTTGTCCCAGAGTCGGAAGTGACCCACATCTGTCGCACAGCCCGTTCCACTTGGGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS GCA 72 bp GAAGGGTTCCAAACCTGTTCACATCTTCCGTGCCCTTaGCACTGTGCCCCTGCCCTGGTTACCCTGCATGCA +
Preference number: 6 (lower is better)
Translates to: EGFQTCSHLPCP*HCAPALVTLHA
Trigger: TGCATGCAGGGTAACCAGGGCAGGGGCACAGTGGCAAGGGCACGGAAGATGTGAACAGGTTTGGAACCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558674.5
ENST00000642552.1
CDS GCA 72 bp CTGGATGAAGGGTTCCAAACCTGTTCACATCTTCCGTaGCCTTGCCACTGTGCCCCTGCCCTGGTTACCCTG +
Preference number: 6 (lower is better)
Translates to: LDEGFQTCSHLP*PCHCAPALVTL
Trigger: CAGGGTAACCAGGGCAGGGGCACAGTGGCAAGGGCACGGAAGATGTGAACAGGTTTGGAACCCTTCATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558674.5
ENST00000642552.1
CDS CAA 72 bp GTACCAGGGGCAACCCCAAAGAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCTGTTAGGAGAAGTGAA +
Preference number: 6 (lower is better)
Translates to: VPGATPKKPFSG*MARSRPVRRSE
Trigger: TTCACTTCTCCTAACAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGTTGCCCCTGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558674.5
ENST00000561050.5
ENST00000642552.1
ENST00000643521.1
CDS CAA 90 bp GTGGCAGAGGTACCAGGGGCAACCCCAAAGAAGCCGTTCTCAGGGTaGATGGCCCGGAGTCGACCTGTTAGGAGAAGTGAAAGAAAGGAA +
Preference number: 6 (lower is better)
Translates to: VAEVPGATPKKPFSG*MARSRPVRRSERKE
Trigger: TTCCTTTCTTTCACTTCTCCTAACAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGTTGCCCCTGGTACCTCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558674.5
ENST00000561050.5
ENST00000642552.1
ENST00000643521.1
CDS TCA 72 bp TGCAGACACTTGACAAAGTCACCATCTCCCAGGGCCTaGAGCACAGGTGTCCCCAGTCGGGTCATAATACGC +
Preference number: 6 (lower is better)
Translates to: CRHLTKSPSPRA*STGVPSRVIIR
Trigger: GCGTATTATGACCCGACTGGGGACACCTGTGCTTCAGGCCCTGGGAGATGGTGACTTTGTCAAGTGTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000216780.9
ENST00000396973.8
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000559250.5
ENST00000559503.1
ENST00000559837.5
ENST00000560736.5
ENST00000561050.5
ENST00000561286.5
ENST00000642552.1
ENST00000642758.1
ENST00000642858.1
ENST00000643521.1
ENST00000644626.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645466.1
ENST00000645536.1
ENST00000645709.1
CDS TCA 72 bp TACCAGGGGCAACCCCAAAGAAGCCGTTCTCAGGGTTaGTGGCCCGGAGTCGACCTGTTAGGAGAAGTGAAA +
Preference number: 6 (lower is better)
Translates to: YQGQPQRSRSQG*WPGVDLLGEVK
Trigger: TTTCACTTCTCCTAACAGGTCGACTCCGGGCCATCAACCCTGAGAACGGCTTCTTTGGGGTTGCCCCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000558674.5
ENST00000561050.5
ENST00000642552.1
ENST00000643521.1
CDS GCA 72 bp GCTCACGTTATCTCTTGTGAAGCCCCCACACCCTCTTaGAGCCCTCTAAGTGGGACGTTTCCTTCAGAGACC +
Preference number: 6 (lower is better)
Translates to: AHVISCEAPTPS*SPLSGTFPSET
Trigger: GGTCTCTGAAGGAAACGTCCCACTTAGAGGGCTGCAAGAGGGTGTGGGGGCTTCACAAGAGATAACGTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559584.5
ENST00000646542.1
CDS CCA 72 bp AGGTATCTGGGAAGGAAAGGAGGATATGCGGAGACCTaGCTCAGCAGAGAGGAGCGAGGAGAGAGAGGAAGT +
Preference number: 6 (lower is better)
Translates to: RYLGRKGGYAET*LSREERGERGS
Trigger: ACTTCCTCTCTCTCCTCGCTCCTCTCTGCTGAGCCAGGTCTCCGCATATCCTCCTTTCCTTCCCAGATACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000545054.6
ENST00000558096.5
ENST00000558674.5
ENST00000561050.5
ENST00000642552.1
ENST00000642758.1
ENST00000643521.1
ENST00000645536.1
CDS TCA 72 bp CAAGCTCAGCCAACACCTCTTTGGGCAGATCCTGGTTaGCCTGCTCTGTCAGGTAGCTCCGAATGTCACGAA +
Preference number: 6 (lower is better)
Translates to: QAQPTPLWADPG*PALSGSSECHE
Trigger: TTCGTGACATTCGGAGCTACCTGACAGAGCAGGTCAACCAGGATCTGCCCAAAGAGGTGTTGGCTGAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000216780.9
ENST00000545054.6
ENST00000558096.5
ENST00000559250.5
ENST00000561286.5
ENST00000642758.1
ENST00000644679.1
ENST00000644897.1
ENST00000645217.2
ENST00000645536.1
CDS TCA 72 bp GAGATTTTGCCTGGGACTGGAAACTGCAAACGTTCATaGCTTCTGTGCCTCCTGGCAGTCCTAGAAGATGGT +
Preference number: 6 (lower is better)
Translates to: EILPGTGNCKRS*LLCLLAVLEDG
Trigger: ACCATCTTCTAGGACTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGCAAAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396973.8
ENST00000645709.1
CDS TCA 72 bp GGTGTTCAGGAAACTTTCTCACTGACAAAGTCATTGTaGACACTAGAGAGGAGACCCCGAGGCTCTGACAAG +
Preference number: 6 (lower is better)
Translates to: GVQETFSLTKSL*TLERRPRGSDK
Trigger: CTTGTCAGAGCCTCGGGGTCTCCTCTCTAGTGTTCACAATGACTTTGTCAGTGAGAAAGTTTCCTGAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000558674.5
ENST00000561050.5
ENST00000642552.1
ENST00000643521.1