Pregenerated sensors for PCDHGC4 (Homo sapiens)
Ensembl gene IDs: ENSG00000242419Ensembl transcript IDs: ENST00000306593.1, ENST00000306593.2, ENST00000610539.1, ENST00000617094.1, ENST00000618371.4
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCACTACCCCCATGGGTACAGCAGTTGATTGGATGGGGGTTCCCAGCGGAACTGAGAAGCTGGGCTGGTTaGGGAGAGGCCGCCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PLPPWVQQLIGWGFPAELRSWAG*GEAALW Trigger: CCACAGGGCGGCCTCTCCCCAACCAGCCCAGCTTCT...CAGTTCCGCTGGGAACCCCCATCCAATCAACTGCTGTACCCATGGGGGTAGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CCA 90 bp | GGCAAATGGTTCTTGGTGTCTACAGTAACCCCACTACCCCCATGGGTACAGCAGAGAAGCTGGGCTGGTTaGGGAGAGGCCGCCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GKWFLVSTVTPLPPWVQQRSWAG*GEAALW Trigger: CCACAGGGCGGCCTCTCCCCAACCAGCCCAGCTTCT...CTGCTGTACCCATGGGGGTAGTGGGGTTACTGTAGACACCAAGAACCATTTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CCA 90 bp | GGGTGTGGCAAATGGTTCTTGGTGTCTACAGTAACCCCACTACCCCCATGGGTAAAGGAGAAGCTGGGCTaGTTGGGGAGAGGCCGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GCGKWFLVSTVTPLPPWVKEKLG*LGRGRP Trigger: AGGGCGGCCTCTCCCCAACCAGCCCAGCTTCTCCTT...TACCCATGGGGGTAGTGGGGTTACTGTAGACACCAAGAACCATTTGCCACACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCTACAGTAACCCCACTACCCCCATGGGTACAGCAGTTGATTGGATGGGGTTCCCAAGGGGAGCATaGCCTTGGCCCCTACCAGTA | + |
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Preference number: 2 (lower is better) Translates to: GVYSNPTTPMGTAVDWMGFPRGA*PWPLPV Trigger: TACTGGTAGGGGCCAAGGCCATGCTCCCCTTGGGAA...CCCCATCCAATCAACTGCTGTACCCATGGGGGTAGTGGGGTTACTGTAGACACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CCA 90 bp | TGGGTACAGCAGTTGATTGGATGGGGGTTCCCAGCGGAACTGCTTTTGCATATTAAGGAGAAGCTGGGCTaGTTGGGGAGAGGCCGCCCT | + |
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Preference number: 2 (lower is better) Translates to: WVQQLIGWGFPAELLLHIKEKLG*LGRGRP Trigger: AGGGCGGCCTCTCCCCAACCAGCCCAGCTTCTCCTT...AATATGCAAAAGCAGTTCCGCTGGGAACCCCCATCCAATCAACTGCTGTACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCTACAGTAACCCCACTACCCCCATGGGTACAGCAGTTGATTGGATGGGGGGGGTAGGTGCTGACTaGGCACTTGTTTCTGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: GVYSNPTTPMGTAVDWMGGVGAD*ALVSVS Trigger: GGAAACAGAAACAAGTGCCCAGTCAGCACCTACCCC...CCCCATCCAATCAACTGCTGTACCCATGGGGGTAGTGGGGTTACTGTAGACACC 54% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAGTTCAGCTGTAACTAAACGGGGTGTGGCAAATGGTTCTTGGTGTCTACAGCAGGTAAGGAGAAGCTaGGCTGGTTGGGGAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RSSAVTKRGVANGSWCLQQVRRS*AGWGEA Trigger: GGCCTCTCCCCAACCAGCCCAGCTTCTCCTTACCTG...CTGTAGACACCAAGAACCATTTGCCACACCCCGTTTAGTTACAGCTGAACTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CCA 90 bp | CCATGGGTACAGCAGTTGATTGGATGGGGGTTCCCAGCGGAACTGCTTTTGCATCCCCTACCAGTATTCTaGGGGTTAGCCCTGAAACTC | + |
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Preference number: 2 (lower is better) Translates to: PWVQQLIGWGFPAELLLHPLPVF*GLALKL Trigger: GAGTTTCAGGGCTAACCCCCAGAATACTGGTAGGGG...ATGCAAAAGCAGTTCCGCTGGGAACCCCCATCCAATCAACTGCTGTACCCATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CCA 90 bp | GGCAAATGGTTCTTGGTGTCTACAGTAACCCCACTACCCCCATGGGTACAGCAGGGGGTAGGTGCTGACTaGGCACTTGTTTCTGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: GKWFLVSTVTPLPPWVQQGVGAD*ALVSVS Trigger: GGAAACAGAAACAAGTGCCCAGTCAGCACCTACCCC...CTGCTGTACCCATGGGGGTAGTGGGGTTACTGTAGACACCAAGAACCATTTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CCA 90 bp | AGGAGTTCAGCTGTAACTAAACGGGGTGTGGCAAATGGTTCTTGGTGTCTACAGTTCCCAAGGGGAGCATaGCCTTGGCCCCTACCAGTA | + |
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Preference number: 2 (lower is better) Translates to: RSSAVTKRGVANGSWCLQFPRGA*PWPLPV Trigger: TACTGGTAGGGGCCAAGGCCATGCTCCCCTTGGGAA...CTGTAGACACCAAGAACCATTTGCCACACCCCGTTTAGTTACAGCTGAACTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CCA 90 bp | TGGGTACAGCAGTTGATTGGATGGGGGTTCCCAGCGGAACTGCTTTTGCATATTCCCCTACCAGTATTCTaGGGGTTAGCCCTGAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: WVQQLIGWGFPAELLLHIPLPVF*GLALKL Trigger: GAGTTTCAGGGCTAACCCCCAGAATACTGGTAGGGG...AATATGCAAAAGCAGTTCCGCTGGGAACCCCCATCCAATCAACTGCTGTACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CAA 90 bp | AGGAGTTCAGCTGTAACTAAACGGGGTGTGGCAAATGGTTCTTGGTGTCTACAGGAGAAGCTGGGCTGGTaGGGGAGAGGCCGCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: RSSAVTKRGVANGSWCLQEKLGW*GRGRPV Trigger: CACAGGGCGGCCTCTCCCCAACCAGCCCAGCTTCTC...CTGTAGACACCAAGAACCATTTGCCACACCCCGTTTAGTTACAGCTGAACTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CAA 90 bp | CCATGGGTACAGCAGTTGATTGGATGGGGGTTCCCAGCGGAACTGCTTTTGCATAAGGGGAGCATGGCCTaGGCCCCTACCAGTATTCTG | + |
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Preference number: 3 (lower is better) Translates to: PWVQQLIGWGFPAELLLHKGSMA*APTSIL Trigger: CAGAATACTGGTAGGGGCCAAGGCCATGCTCCCCTT...ATGCAAAAGCAGTTCCGCTGGGAACCCCCATCCAATCAACTGCTGTACCCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CAA 90 bp | GGTGTCTACAGTAACCCCACTACCCCCATGGGTACAGCAGTTGATTGGATGGGGGTGCTGACTGGGCACTaGTTTCTGTTTCCCAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GVYSNPTTPMGTAVDWMGVLTGH*FLFPKG Trigger: CCCCTTGGGAAACAGAAACAAGTGCCCAGTCAGCAC...CCCCATCCAATCAACTGCTGTACCCATGGGGGTAGTGGGGTTACTGTAGACACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CAA 90 bp | GGCAAATGGTTCTTGGTGTCTACAGTAACCCCACTACCCCCATGGGTACAGCAGGTGCTGACTGGGCACTaGTTTCTGTTTCCCAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GKWFLVSTVTPLPPWVQQVLTGH*FLFPKG Trigger: CCCCTTGGGAAACAGAAACAAGTGCCCAGTCAGCAC...CTGCTGTACCCATGGGGGTAGTGGGGTTACTGTAGACACCAAGAACCATTTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| 3UTR-3UTR CAA 90 bp | TGGGTACAGCAGTTGATTGGATGGGGGTTCCCAGCGGAACTGCTTTTGCATATTAAGGGGAGCATGGCCTaGGCCCCTACCAGTATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: WVQQLIGWGFPAELLLHIKGSMA*APTSIL Trigger: CAGAATACTGGTAGGGGCCAAGGCCATGCTCCCCTT...AATATGCAAAAGCAGTTCCGCTGGGAACCCCCATCCAATCAACTGCTGTACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000306593.1 ENST00000618371.4 |
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| CDS-3UTR TCA 90 bp | CCACTACCCCCATGGGTACAGCAGTTGATTGGATGGGGGTTCCCAGCGGAACTGCTCCTGAGACGCGGATaGAGCCGACCCGCCCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: PLPPWVQQLIGWGFPAELLLRRG*SRPAPN Trigger: GTTTGGGGCGGGTCGGCTTCATCCGCGTCTCAGGAG...CAGTTCCGCTGGGAACCCCCATCCAATCAACTGCTGTACCCATGGGGGTAGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000618371.4 |
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| CDS-3UTR CCA 90 bp | GGCAAATGGTTCTTGGTGTCTACAGTAACCCCACTACCCCCATGGGTACAGCAGAACGCCAGTCCGTGTTaGGCGGGGCTTGCTTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: GKWFLVSTVTPLPPWVQQNASPC*AGLACG Trigger: TCCGCAAGCAAGCCCCGCCCAACACGGACTGGCGTT...CTGCTGTACCCATGGGGGTAGTGGGGTTACTGTAGACACCAAGAACCATTTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000618371.4 |
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| CDS-3UTR TCA 90 bp | TGGGTACAGCAGTTGATTGGATGGGGGTTCCCAGCGGAACTGCTTTTGCATATTTTCTCTACTTGCTCCTaGGACGCGGATGAAGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: WVQQLIGWGFPAELLLHIFSTCS*DADEAD Trigger: GTCGGCTTCATCCGCGTCTCAGGAGCAAGTAGAGAA...AATATGCAAAAGCAGTTCCGCTGGGAACCCCCATCCAATCAACTGCTGTACCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000618371.4 |
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| CDS-3UTR GCA 90 bp | AGGAGTTCAGCTGTAACTAAACGGGGTGTGGCAAATGGTTCTTGGTGTCTACAGCTTGCGGAGCATTGCTaGCGCCCGCTAATTCTCTAC | + |
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Preference number: 4 (lower is better) Translates to: RSSAVTKRGVANGSWCLQLAEHC*RPLILY Trigger: GTAGAGAATTAGCGGGCGGCAGCAATGCTCCGCAAG...CTGTAGACACCAAGAACCATTTGCCACACCCCGTTTAGTTACAGCTGAACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618371.4 |
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| CDS-3UTR GCA 90 bp | AGGAGTTCAGCTGTAACTAAACGGGGTGTGGCAAATGGTTCTTGGTGTCTACAGTTGCTTGCGGAGCATTaGTGCCGCCCGCTAATTCTC | + |
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Preference number: 4 (lower is better) Translates to: RSSAVTKRGVANGSWCLQLLAEH*CRPLIL Trigger: GAGAATTAGCGGGCGGCAGCAATGCTCCGCAAGCAA...CTGTAGACACCAAGAACCATTTGCCACACCCCGTTTAGTTACAGCTGAACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618371.4 |
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| CDS-3UTR CCA 90 bp | AGGAGTTCAGCTGTAACTAAACGGGGTGTGGCAAATGGTTCTTGGTGTCTACAGAACAGCCACAGCAGCTaGAGACACCTATCTCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: RSSAVTKRGVANGSWCLQNSHSS*RHLSPF Trigger: AAAGGGAGATAGGTGTCTCCAGCTGCTGTGGCTGTT...CTGTAGACACCAAGAACCATTTGCCACACCCCGTTTAGTTACAGCTGAACTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618371.4 |
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| CDS CCA 90 bp | CCACAGCAGCTGGAGACACCTATCTCCCTTTCCCCGCGCCAGCTCTaGCGCGGTTCGGCCGGCGCCGCAAGGGTTACGCGCCGTTTTTGC | + |
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Preference number: 5 (lower is better) Translates to: PQQLETPISLSPRQL*RGSAGAARVTRRFC Trigger: GCAAAAACGGCGCGTAACCCTTGCGGCGCCGGCCGAACCGCGCCAGAGCTGGCGCGGGGAAAGGGAGATAGGTGTCTCCAGCTGCTGTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617094.1 |
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| CDS TCA 90 bp | GTGTCATCGCCATTTTGGGAGCCGCTGGTGCCGGGTCTCTGGGCCTaGGAGAAACGCCAGTCCGTGTTGGGCGGGGCTTGCTTGCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: VSSPFWEPLVPGLWA*EKRQSVLGGACLRS Trigger: GCTCCGCAAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618371.4 |
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| CDS TCA 90 bp | GTGTCATCGCCATTTTGGGAGCCGCTGGTGCCGGGTCTCTGGGCCTaGGAGAAACGCCAGTCCGTGTTGGGCGGGGCTTGCTCTAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: VSSPFWEPLVPGLWA*EKRQSVLGGACSSP Trigger: TGGGCTAGAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306593.2 |
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| CDS GCA 90 bp | GACAAACTCCAGGGGCACGATGCAGCTGGCACTGAGCCCACACAGTaGCTCTCGGTCGATTGGGTTCTTGATGAGCAGGGCTCCGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: DKLQGHDAAGTEPTQ*LSVDWVLDEQGSAV Trigger: GACAGCGGAGCCCTGCTCATCAAGAACCCAATCGACCGAGAGGCACTGTGTGGGCTCAGTGCCAGCTGCATCGTGCCCCTGGAGTTTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS TCA 90 bp | CATTGCTGCCGCCCGCTAATTCTCTACTTGCTCCTGAGACGCGGATaGAGCCGACCCGCCCCAAACAGCCACAGCAGCTGGAGACACCTA | + |
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Preference number: 5 (lower is better) Translates to: HCCRPLILYLLLRRG*SRPAPNSHSSWRHL Trigger: TAGGTGTCTCCAGCTGCTGTGGCTGTTTGGGGCGGGTCGGCTTCATCCGCGTCTCAGGAGCAAGTAGAGAATTAGCGGGCGGCAGCAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 ENST00000618371.4 |
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| CDS CCA 90 bp | GTGACGTTACCACTGGGACCCAGGTCCGGGTCTGAGGCATTGAGCTaGATGAGCACCATGCCCGCTGGTGCGCTCTCCAACACACTAATC | + |
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Preference number: 5 (lower is better) Translates to: VTLPLGPRSGSEALS*MSTMPAGALSNTLI Trigger: GATTAGTGTGTTGGAGAGCGCACCAGCGGGCATGGTGCTCATCCAGCTCAATGCCTCAGACCCGGACCTGGGTCCCAGTGGTAACGTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CCA 90 bp | ACCTTTGTGATTAGGTGGCCAGCACCAACTGATGGAGGCAGTGCTTaGGGACATAAGGAACCAGGCCGGGCCCGAGGACGGAGCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: TFVIRWPAPTDGGSA*GHKEPGRARGRSTA Trigger: AGCTGTGCTCCGTCCTCGGGCCCGGCCTGGTTCCTTATGTCCCCAAGCACTGCCTCCATCAGTTGGTGCTGGCCACCTAATCACAAAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS-3UTR CAA 90 bp | CCATGGGTACAGCAGTTGATTGGATGGGGGTTCCCAGCGGAACTGCTTTTGCATTTGGGCGGGGCTTGCTaGCGGAGCATTGCTGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: PWVQQLIGWGFPAELLLHLGGAC*RSIAAA Trigger: GGCGGCAGCAATGCTCCGCAAGCAAGCCCCGCCCAA...ATGCAAAAGCAGTTCCGCTGGGAACCCCCATCCAATCAACTGCTGTACCCATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000618371.4 |
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| CDS TCA 90 bp | TGGGCAGCTTGGGCGAACAGGCTCCCCTGCCATAGGTGCACTGGGTaGCTTCACCATCATGAAGCTATCACTCCGAGTGGGTGCAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: WAAWANRLPCHRCTG*LHHHEAITPSGCRS Trigger: GCTTCTGCACCCACTCGGAGTGATAGCTTCATGATGGTGAAGTCACCCAGTGCACCTATGGCAGGGGAGCCTGTTCGCCCAAGCTGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CCA 90 bp | CACGATGCAGCTGGCACTGAGCCCACACAGTGCCTCTCGGTCGATTaGGTTCTTGATGAGCAGGGCTCCGCTGTCCAAATCCACACGGAA | + |
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Preference number: 5 (lower is better) Translates to: HDAAGTEPTQCLSVD*VLDEQGSAVQIHTE Trigger: TTCCGTGTGGATTTGGACAGCGGAGCCCTGCTCATCAAGAACCCAATCGACCGAGAGGCACTGTGTGGGCTCAGTGCCAGCTGCATCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CCA 90 bp | CAGCCGTCCGCACCTCCCCAGCATATCGAGAGACTGCAAACAGGCTaGGATCTGGGGCCTCCAGGAGCTGATAGGAAACCCAAGCATTGT | + |
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Preference number: 5 (lower is better) Translates to: QPSAPPQHIERLQTG*DLGPPGADRKPKHC Trigger: ACAATGCTTGGGTTTCCTATCAGCTCCTGGAGGCCCCAGATCCCAGCCTGTTTGCAGTCTCTCGATATGCTGGGGAGGTGCGGACGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS-3UTR CAA 90 bp | GGGTGTGGCAAATGGTTCTTGGTGTCTACAGTAACCCCACTACCCCCATGGGTAAAACGCCAGTCCGTGTaGGGCGGGGCTTGCTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: GCGKWFLVSTVTPLPPWVKRQSV*GGACLR Trigger: CCGCAAGCAAGCCCCGCCCAACACGGACTGGCGTTT...TACCCATGGGGGTAGTGGGGTTACTGTAGACACCAAGAACCATTTGCCACACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000618371.4 |
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| CDS CCA 90 bp | TTGATGAGCAGGGCTCCGCTGTCCAAATCCACACGGAAGTGTCTTTaGTTCACCTCTCCAGCGACCTGCAGCCTGCGAGCTGACAGACTG | + |
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Preference number: 5 (lower is better) Translates to: LMSRAPLSKSTRKCL*FTSPATCSLRADRL Trigger: CAGTCTGTCAGCTCGCAGGCTGCAGGTCGCTGGAGAGGTGAACCAAAGACACTTCCGTGTGGATTTGGACAGCGGAGCCCTGCTCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CCA 90 bp | TGGTGGACTACCACTATCCTTTACCACAATGACCAGCTTCTGTGGTaGGAGGTCAGCTGGGATAGGAACAGCCGTCCGCACCTCCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: WWTTTILYHNDQLLW*EVSWDRNSRPHLPS Trigger: GCTGGGGAGGTGCGGACGGCTGTTCCTATCCCAGCTGACCTCCCACCACAGAAGCTGGTCATTGTGGTAAAGGATAGTGGTAGTCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CCA 90 bp | GAGTGGTGGACTACCACTATCCTTTACCACAATGACCAGCTTCTGTaGTGGGAGGTCAGCTGGGATAGGAACAGCCGTCCGCACCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: EWWTTTILYHNDQLL*WEVSWDRNSRPHLP Trigger: GGGGAGGTGCGGACGGCTGTTCCTATCCCAGCTGACCTCCCACCACAGAAGCTGGTCATTGTGGTAAAGGATAGTGGTAGTCCACCACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 90 bp | CCACACGGAAGTGTCTTTGGTTCACCTCTCCAGCGACCTGCAGCCTaGGAGCTGACAGACTGTCCGTATCCAGCAGGAAATCTTGAGCGA | + |
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Preference number: 5 (lower is better) Translates to: PHGSVFGSPLQRPAA*ELTDCPYPAGNLER Trigger: TCGCTCAAGATTTCCTGCTGGATACGGACAGTCTGTCAGCTCGCAGGCTGCAGGTCGCTGGAGAGGTGAACCAAAGACACTTCCGTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS GCA 90 bp | TCTCTCGATCCAAAGGCTTCTCCAGGAGCAGCTCTGGGACCAGGCTaGCGTCGCTGCGCTTCTTCACATCCAGTGCAAAGTGTTCATTGG | + |
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Preference number: 5 (lower is better) Translates to: SLDPKASPGAALGPG*RRCASSHPVQSVHW Trigger: CCAATGAACACTTTGCACTGGATGTGAAGAAGCGCAGCGACGGCAGCCTGGTCCCAGAGCTGCTCCTGGAGAAGCCTTTGGATCGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 90 bp | GGAATGCGGAGGCTCACATCTCCGTTTGACCCTGAGTCTGGATCCTaGACACTGATAAGTGCCACCACAGTGCCAGGTTCTGCACTCTCG | + |
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Preference number: 5 (lower is better) Translates to: GMRRLTSPFDPESGS*TLISATTVPGSALS Trigger: CGAGAGTGCAGAACCTGGCACTGTGGTGGCACTTATCAGTGTGCAGGATCCAGACTCAGGGTCAAACGGAGATGTGAGCCTCCGCATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS TCA 90 bp | GAAGTGTCTTTGGTTCACCTCTCCAGCGACCTGCAGCCTGCGAGCTaGCAGACTGTCCGTATCCAGCAGGAAATCTTGAGCGACATTCCC | + |
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Preference number: 5 (lower is better) Translates to: EVSLVHLSSDLQPAS*QTVRIQQEILSDIP Trigger: GGGAATGTCGCTCAAGATTTCCTGCTGGATACGGACAGTCTGTCAGCTCGCAGGCTGCAGGTCGCTGGAGAGGTGAACCAAAGACACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CCA 90 bp | GATTTGGCCTCTCGATCCAAGGGTCCAGCAGTCACCAGGGAGAACTaGTTCCTGAAGGCAGACTTGAGGGCAAATGGCAAGTGGTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: DLASRSKGPAVTREN*FLKADLRANGKWSG Trigger: TCCTGACCACTTGCCATTTGCCCTCAAGTCTGCCTTCAGGAACCAGTTCTCCCTGGTGACTGCTGGACCCTTGGATCGAGAGGCCAAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CCA 90 bp | TGGCCTCCCACATCAACAAACTTGATAGGGTCATCTGACCCTAGCTaGATTCGGAGGATCCCATTGGAAGGGGGAAGCCCCTCCCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: WPPTSTNLIGSSDPS*IRRIPLEGGSPSLL Trigger: AAGGAGGGAGGGGCTTCCCCCTTCCAATGGGATCCTCCGAATCCAGCTAGGGTCAGATGACCCTATCAAGTTTGTTGATGTGGGAGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 90 bp | TCCAAATCCACACGGAAGTGTCTTTGGTTCACCTCTCCAGCGACCTaGAGCCTGCGAGCTGACAGACTGTCCGTATCCAGCAGGAAATCT | + |
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Preference number: 5 (lower is better) Translates to: SKSTRKCLWFTSPAT*SLRADRLSVSSRKS Trigger: AGATTTCCTGCTGGATACGGACAGTCTGTCAGCTCGCAGGCTGCAGGTCGCTGGAGAGGTGAACCAAAGACACTTCCGTGTGGATTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS GCA 90 bp | GCATTGTCATTTACGTCCAGCAGATCCACTCGAAGGCTGCAATGTTaGTCCATGGCTGGAGAACCCCCATCGCGAGCCCGCACATCAAAT | + |
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Preference number: 5 (lower is better) Translates to: ALSFTSSRSTRRLQC*SMAGEPPSRARTSN Trigger: ATTTGATGTGCGGGCTCGCGATGGGGGTTCTCCAGCCATGGAGCAACATTGCAGCCTTCGAGTGGATCTGCTGGACGTAAATGACAATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CCA 90 bp | AGGGAGAACTGGTTCCTGAAGGCAGACTTGAGGGCAAATGGCAAGTaGTCAGGAATGCGGAGGCTCACATCTCCGTTTGACCCTGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RENWFLKADLRANGK*SGMRRLTSPFDPES Trigger: AGACTCAGGGTCAAACGGAGATGTGAGCCTCCGCATTCCTGACCACTTGCCATTTGCCCTCAAGTCTGCCTTCAGGAACCAGTTCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 90 bp | ATTGGAGCTCAGCCTATAGCTGCTAATCGAATTGCTCCCCACATCTaGATCCTGAGCCTTTTCCAACGGGAAACGCTGTCCTGGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IGAQPIAANRIAPHI*ILSLFQRETLSWRS Trigger: GCTCCTCCAGGACAGCGTTTCCCGTTGGAAAAGGCTCAGGATGCAGATGTGGGGAGCAATTCGATTAGCAGCTATAGGCTGAGCTCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS GCA 90 bp | CAGCTCTGGGACCAGGCTGCCGTCGCTGCGCTTCTTCACATCCAGTaGAAAGTGTTCATTGGAGCTCAGCCTATAGCTGCTAATCGAATT | + |
|
Preference number: 5 (lower is better) Translates to: QLWDQAAVAALLHIQ*KVFIGAQPIAANRI Trigger: AATTCGATTAGCAGCTATAGGCTGAGCTCCAATGAACACTTTGCACTGGATGTGAAGAAGCGCAGCGACGGCAGCCTGGTCCCAGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CCA 90 bp | CATTTACGTCCAGCAGATCCACTCGAAGGCTGCAATGTTGCTCCATaGCTGGAGAACCCCCATCGCGAGCCCGCACATCAAATTCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: HLRPADPLEGCNVAP*LENPHREPAHQIHS Trigger: ACTATGAATTTGATGTGCGGGCTCGCGATGGGGGTTCTCCAGCCATGGAGCAACATTGCAGCCTTCGAGTGGATCTGCTGGACGTAAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS TCA 90 bp | AAGCTATCACTCCGAGTGGGTGCAGAAGCCAAGGGTGTACAGCCATaGGAGTGGCCTCCCACATCAACAAACTTGATAGGGTCATCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KLSLRVGAEAKGVQP*EWPPTSTNLIGSSD Trigger: GTCAGATGACCCTATCAAGTTTGTTGATGTGGGAGGCCACTCTCATGGCTGTACACCCTTGGCTTCTGCACCCACTCGGAGTGATAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CCA 90 bp | TACGTCCAGCAGATCCACTCGAAGGCTGCAATGTTGCTCCATGGCTaGAGAACCCCCATCGCGAGCCCGCACATCAAATTCATAGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: YVQQIHSKAAMLLHG*RTPIASPHIKFIVI Trigger: AATTACTATGAATTTGATGTGCGGGCTCGCGATGGGGGTTCTCCAGCCATGGAGCAACATTGCAGCCTTCGAGTGGATCTGCTGGACGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS-3UTR CAA 90 bp | AGGAGTTCAGCTGTAACTAAACGGGGTGTGGCAAATGGTTCTTGGTGTCTACAGCTTGCTTGCGGAGCATaGCTGCCGCCCGCTAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSSAVTKRGVANGSWCLQLACGA*LPPANS Trigger: AGAATTAGCGGGCGGCAGCAATGCTCCGCAAGCAAG...CTGTAGACACCAAGAACCATTTGCCACACCCCGTTTAGTTACAGCTGAACTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618371.4 |
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| CDS GCA 90 bp | CACTTACTGAGAGGCCAGTACTCTCTAGGACATGGCCTAGCCATATaGCTGGATCAGAATAACCCTCAAGCATTTGTTGAGCCTGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HLLRGQYSLGHGLAI*LDQNNPQAFVEPAK Trigger: CTTTGCAGGCTCAACAAATGCTTGAGGGTTATTCTGATCCAGGCATATGGCTAGGCCATGTCCTAGAGAGTACTGGCCTCTCAGTAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617094.1 |
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| CDS TCA 90 bp | CCTTCCCTTGGAGCTGAAGATTCTCGAAGATCTGGGACAACTGGATaGGTGTCTTCCTCTAAGGACACTAAGAGAGTAACAGAGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSLGAEDSRRSGTTG*VSSSKDTKRVTEVE Trigger: CTCTACCTCTGTTACTCTCTTAGTGTCCTTAGAGGAAGACACTCATCCAGTTGTCCCAGATCTTCGAGAATCTTCAGCTCCAAGGGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS TCA 90 bp | TACAAAGCACAGCGTCTACCACATAGTTACCTCTTACAAAAATGGTaGCATCACTATGGGCACTTACTGAGAGGCCAGTACTCTCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YKAQRLPHSYLLQKW*HHYGHLLRGQYSLG Trigger: TCCTAGAGAGTACTGGCCTCTCAGTAAGTGCCCATAGTGATGTCACCATTTTTGTAAGAGGTAACTATGTGGTAGACGCTGTGCTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617094.1 |
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| CDS CCA 72 bp | CGGGTCTCTGGGCCTGAGAGAAACGCCAGTCCGTGTTaGGCGGGGCTTGCTTGCGGAGCATTGCTGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RVSGPERNASPC*AGLACGALLPP Trigger: GGGCGGCAGCAATGCTCCGCAAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618371.4 |
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| CDS CCA 72 bp | CCACTGGGACCCAGGTCCGGGTCTGAGGCATTGAGCTaGATGAGCACCATGCCCGCTGGTGCGCTCTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: PLGPRSGSEALS*MSTMPAGALSN Trigger: GTTGGAGAGCGCACCAGCGGGCATGGTGCTCATCCAGCTCAATGCCTCAGACCCGGACCTGGGTCCCAGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 72 bp | CGTTTACGTCCAGCACGGATACCCGGAGCTCTGCGGTaGCAGATCTCGGCGGGTTCCCTCCATCGACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLRPARIPGALR*QISAGSLHRQQ Trigger: CTGCTGTCGATGGAGGGAACCCGCCGAGATCTGGCACCGCAGAGCTCCGGGTATCCGTGCTGGACGTAAACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 72 bp | GTCCGTGTTGGGCGGGGCTTGCTTGCGGAGCATTGCTaGCGCCCGCTAATTCTCTACTTGCTCCTGAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: VRVGRGLLAEHC*RPLILYLLLRR Trigger: GCGTCTCAGGAGCAAGTAGAGAATTAGCGGGCGGCAGCAATGCTCCGCAAGCAAGCCCCGCCCAACACGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618371.4 |
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| CDS CCA 72 bp | ATTAGGTGGCCAGCACCAACTGATGGAGGCAGTGCTTaGGGACATAAGGAACCAGGCCGGGCCCGAGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: IRWPAPTDGGSA*GHKEPGRARGR Trigger: CCGTCCTCGGGCCCGGCCTGGTTCCTTATGTCCCCAAGCACTGCCTCCATCAGTTGGTGCTGGCCACCTAAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 72 bp | AGCCTTTTCCAACGGGAAACGCTGTCCTGGAGGAGCTaGCTCCCCAATTTCCAAGTCCAGCTGCTGCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SLFQRETLSWRS*LPNFQVQLLPR Trigger: CCGCGGCAGCAGCTGGACTTGGAAATTGGGGAGGCAGCTCCTCCAGGACAGCGTTTCCCGTTGGAAAAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CCA 72 bp | CGGGTCTCTGGGCCTGAGAGAAACGCCAGTCCGTGTTaGGCGGGGCTTGCTCTAGCCCATAGAGAAGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: RVSGPERNASPC*AGLALAHREDQ Trigger: CTGATCTTCTCTATGGGCTAGAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306593.2 |
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| CDS CAA 72 bp | CAGGGCTCCGCTGTCCAAATCCACACGGAAGTGTCTTaGGTTCACCTCTCCAGCGACCTGCAGCCTGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QGSAVQIHTEVS*VHLSSDLQPAS Trigger: GCTCGCAGGCTGCAGGTCGCTGGAGAGGTGAACCAAAGACACTTCCGTGTGGATTTGGACAGCGGAGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS GCA 72 bp | TTTACGTCCAGCAGATCCACTCGAAGGCTGCAATGTTaGTCCATGGCTGGAGAACCCCCATCGCGAGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: FTSSRSTRRLQC*SMAGEPPSRAR Trigger: GCGGGCTCGCGATGGGGGTTCTCCAGCCATGGAGCAACATTGCAGCCTTCGAGTGGATCTGCTGGACGTAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CCA 72 bp | AGGGCTCCGCTGTCCAAATCCACACGGAAGTGTCTTTaGTTCACCTCTCCAGCGACCTGCAGCCTGCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RAPLSKSTRKCL*FTSPATCSLRA Trigger: AGCTCGCAGGCTGCAGGTCGCTGGAGAGGTGAACCAAAGACACTTCCGTGTGGATTTGGACAGCGGAGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CCA 72 bp | GCTGGCACTGAGCCCACACAGTGCCTCTCGGTCGATTaGGTTCTTGATGAGCAGGGCTCCGCTGTCCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: AGTEPTQCLSVD*VLDEQGSAVQI Trigger: GATTTGGACAGCGGAGCCCTGCTCATCAAGAACCCAATCGACCGAGAGGCACTGTGTGGGCTCAGTGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CCA 72 bp | CCAGCAGATCCACTCGAAGGCTGCAATGTTGCTCCATaGCTGGAGAACCCCCATCGCGAGCCCGCACATCAA | + |
|
Preference number: 6 (lower is better) Translates to: PADPLEGCNVAP*LENPHREPAHQ Trigger: TTGATGTGCGGGCTCGCGATGGGGGTTCTCCAGCCATGGAGCAACATTGCAGCCTTCGAGTGGATCTGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CAA 72 bp | CTGAGCCCACACAGTGCCTCTCGGTCGATTGGGTTCTaGATGAGCAGGGCTCCGCTGTCCAAATCCACACGG | + |
|
Preference number: 6 (lower is better) Translates to: LSPHSASRSIGF*MSRAPLSKSTR Trigger: CCGTGTGGATTTGGACAGCGGAGCCCTGCTCATCAAGAACCCAATCGACCGAGAGGCACTGTGTGGGCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CAA 72 bp | GGGTCATCTGACCCTAGCTGGATTCGGAGGATCCCATaGGAAGGGGGAAGCCCCTCCCTCCTTCGAGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSSDPSWIRRIP*EGGSPSLLRDL Trigger: CAGATCTCGAAGGAGGGAGGGGCTTCCCCCTTCCAATGGGATCCTCCGAATCCAGCTAGGGTCAGATGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CAA 90 bp | CAGCTGGCACTGAGCCCACACAGTGCCTCTCGGTCGATTGGGTTCTaGATGAGCAGGGCTCCGCTGTCCAAATCCACACGGAAGTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QLALSPHSASRSIGF*MSRAPLSKSTRKCL Trigger: AAGACACTTCCGTGTGGATTTGGACAGCGGAGCCCTGCTCATCAAGAACCCAATCGACCGAGAGGCACTGTGTGGGCTCAGTGCCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS TCA 72 bp | TGGGCGAACAGGCTCCCCTGCCATAGGTGCACTGGGTaGCTTCACCATCATGAAGCTATCACTCCGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WANRLPCHRCTG*LHHHEAITPSG Trigger: CCCACTCGGAGTGATAGCTTCATGATGGTGAAGTCACCCAGTGCACCTATGGCAGGGGAGCCTGTTCGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS TCA 72 bp | CGAGCTGACAGACTGTCCGTATCCAGCAGGAAATCTTaGGCGACATTCCCTTGCGGAGCATTGCTGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RADRLSVSSRKS*ATFPCGALLPP Trigger: GGGCGGCAGCAATGCTCCGCAAGGGAATGTCGCTCAAGATTTCCTGCTGGATACGGACAGTCTGTCAGCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610539.1 |
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| CDS GCA 72 bp | ACACGGAAGTGTCTTTGGTTCACCTCTCCAGCGACCTaGAGCCTGCGAGCTGACAGACTGTCCGTATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TRKCLWFTSPAT*SLRADRLSVSS Trigger: GCTGGATACGGACAGTCTGTCAGCTCGCAGGCTGCAGGTCGCTGGAGAGGTGAACCAAAGACACTTCCGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CAA 72 bp | ATTTACGTCCAGCAGATCCACTCGAAGGCTGCAATGTaGCTCCATGGCTGGAGAACCCCCATCGCGAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: IYVQQIHSKAAM*LHGWRTPIASP Trigger: CGGGCTCGCGATGGGGGTTCTCCAGCCATGGAGCAACATTGCAGCCTTCGAGTGGATCTGCTGGACGTAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CAA 72 bp | CCAGGCCGGGCCCGAGGACGGAGCACAGCTGGAGCATaGTCATTGAGGTCCAGCACAAATAGACGAACTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PGRARGRSTAGA*SLRSSTNRRTV Trigger: AACAGTTCGTCTATTTGTGCTGGACCTCAATGACAATGCTCCAGCTGTGCTCCGTCCTCGGGCCCGGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS TCA 72 bp | TTGGTTCACCTCTCCAGCGACCTGCAGCCTGCGAGCTaGCAGACTGTCCGTATCCAGCAGGAAATCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LVHLSSDLQPAS*QTVRIQQEILS Trigger: GCTCAAGATTTCCTGCTGGATACGGACAGTCTGTCAGCTCGCAGGCTGCAGGTCGCTGGAGAGGTGAACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CCA 72 bp | TGCATCCTGAGCCTTTTCCAACGGGAAACGCTGTCCTaGAGGAGCTGCCTCCCCAATTTCCAAGTCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CILSLFQRETLS*RSCLPNFQVQL Trigger: CAGCTGGACTTGGAAATTGGGGAGGCAGCTCCTCCAGGACAGCGTTTCCCGTTGGAAAAGGCTCAGGATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CCA 72 bp | CAGATCCACTCGAAGGCTGCAATGTTGCTCCATGGCTaGAGAACCCCCATCGCGAGCCCGCACATCAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: QIHSKAAMLLHG*RTPIASPHIKF Trigger: GAATTTGATGTGCGGGCTCGCGATGGGGGTTCTCCAGCCATGGAGCAACATTGCAGCCTTCGAGTGGATCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CAA 72 bp | GCAGTCACCAGGGAGAACTGGTTCCTGAAGGCAGACTaGAGGGCAAATGGCAAGTGGTCAGGAATGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVTRENWFLKAD*RANGKWSGMRR Trigger: CCTCCGCATTCCTGACCACTTGCCATTTGCCCTCAAGTCTGCCTTCAGGAACCAGTTCTCCCTGGTGACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CAA 90 bp | GGCATTGTCATTTACGTCCAGCAGATCCACTCGAAGGCTGCAATGTaGCTCCATGGCTGGAGAACCCCCATCGCGAGCCCGCACATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GIVIYVQQIHSKAAM*LHGWRTPIASPHIK Trigger: TTTGATGTGCGGGCTCGCGATGGGGGTTCTCCAGCCATGGAGCAACATTGCAGCCTTCGAGTGGATCTGCTGGACGTAAATGACAATGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CAA 90 bp | GTTGCCCCGATCCCGGGCCTGCACCTCAAACTGCAGTGTCTGGGTTaGCTCATAGTCAAAGGATCGAGTAGCATGAACAGCTCCTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VAPIPGLHLKLQCLG*LIVKGSSSMNSSCL Trigger: CAGACAGGAGCTGTTCATGCTACTCGATCCTTTGACTATGAGCAAACCCAGACACTGCAGTTTGAGGTGCAGGCCCGGGATCGGGGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CAA 90 bp | CATAAGGAACCAGGCCGGGCCCGAGGACGGAGCACAGCTGGAGCATaGTCATTGAGGTCCAGCACAAATAGACGAACTGTTACAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HKEPGRARGRSTAGA*SLRSSTNRRTVTVL Trigger: CAGCACTGTAACAGTTCGTCTATTTGTGCTGGACCTCAATGACAATGCTCCAGCTGTGCTCCGTCCTCGGGCCCGGCCTGGTTCCTTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CAA 90 bp | AACTTGATAGGGTCATCTGACCCTAGCTGGATTCGGAGGATCCCATaGGAAGGGGGAAGCCCCTCCCTCCTTCGAGATCTGGTGAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: NLIGSSDPSWIRRIP*EGGSPSLLRDLVRQ Trigger: CTGTCTCACCAGATCTCGAAGGAGGGAGGGGCTTCCCCCTTCCAATGGGATCCTCCGAATCCAGCTAGGGTCAGATGACCCTATCAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 72 bp | GATTTCTGTCCAGCTTCTCACCTTGCGGAGCATTGCTaGCGCCCGCTAATTCTCTACTTGCTCCTGAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: DFCPASHLAEHC*RPLILYLLLRR Trigger: GCGTCTCAGGAGCAAGTAGAGAATTAGCGGGCGGCAGCAATGCTCCGCAAGGTGAGAAGCTGGACAGAAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 72 bp | AGTGTCTTTGGTTCACCTCTCCAGCGACCTGCAGCCTaGGAGCTGACAGACTGTCCGTATCCAGCAGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SVFGSPLQRPAA*ELTDCPYPAGN Trigger: ATTTCCTGCTGGATACGGACAGTCTGTCAGCTCGCAGGCTGCAGGTCGCTGGAGAGGTGAACCAAAGACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS GCA 72 bp | GACCAGGCTGCCGTCGCTGCGCTTCTTCACATCCAGTaGAAAGTGTTCATTGGAGCTCAGCCTATAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DQAAVAALLHIQ*KVFIGAQPIAA Trigger: AGCAGCTATAGGCTGAGCTCCAATGAACACTTTGCACTGGATGTGAAGAAGCGCAGCGACGGCAGCCTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS GCA 72 bp | GGAAATCTTGAGCGACATTCCCTTGCGGAGCATTGCTaGCGCCCGCTAATTCTCTACTTGCTCCTGAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: GNLERHSLAEHC*RPLILYLLLRR Trigger: GCGTCTCAGGAGCAAGTAGAGAATTAGCGGGCGGCAGCAATGCTCCGCAAGGGAATGTCGCTCAAGATTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610539.1 |
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| CDS CCA 72 bp | TCTCGATCCAAGGGTCCAGCAGTCACCAGGGAGAACTaGTTCCTGAAGGCAGACTTGAGGGCAAATGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRSKGPAVTREN*FLKADLRANGK Trigger: CTTGCCATTTGCCCTCAAGTCTGCCTTCAGGAACCAGTTCTCCCTGGTGACTGCTGGACCCTTGGATCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CCA 72 bp | ACCACTATCCTTTACCACAATGACCAGCTTCTGTGGTaGGAGGTCAGCTGGGATAGGAACAGCCGTCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TTILYHNDQLLW*EVSWDRNSRPH Trigger: GTGCGGACGGCTGTTCCTATCCCAGCTGACCTCCCACCACAGAAGCTGGTCATTGTGGTAAAGGATAGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CAA 72 bp | GCCAGATTTCTGTCCAGCTTCTCACCTTGCGGAGCATaGCTGCCGCCCGCTAATTCTCTACTTGCTCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ARFLSSFSPCGA*LPPANSLLAPE Trigger: CTCAGGAGCAAGTAGAGAATTAGCGGGCGGCAGCAATGCTCCGCAAGGTGAGAAGCTGGACAGAAATCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CAA 72 bp | CGGGCCCGAGGACGGAGCACAGCTGGAGCATTGTCATaGAGGTCCAGCACAAATAGACGAACTGTTACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RARGRSTAGALS*RSSTNRRTVTV Trigger: CACTGTAACAGTTCGTCTATTTGTGCTGGACCTCAATGACAATGCTCCAGCTGTGCTCCGTCCTCGGGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 72 bp | CCAGATTTCTGTCCAGCTTCTCACCTTGCGGAGCATTaGTGCCGCCCGCTAATTCTCTACTTGCTCCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PDFCPASHLAEH*CRPLILYLLLR Trigger: TCTCAGGAGCAAGTAGAGAATTAGCGGGCGGCAGCAATGCTCCGCAAGGTGAGAAGCTGGACAGAAATCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 72 bp | CATTGTCATTTACGTCCAGCAGATCCACTCGAAGGCTaGAATGTTGCTCCATGGCTGGAGAACCCCCATCGC | + |
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Preference number: 6 (lower is better) Translates to: HCHLRPADPLEG*NVAPWLENPHR Trigger: GCGATGGGGGTTCTCCAGCCATGGAGCAACATTGCAGCCTTCGAGTGGATCTGCTGGACGTAAATGACAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CCA 72 bp | TGGTTCCTGAAGGCAGACTTGAGGGCAAATGGCAAGTaGTCAGGAATGCGGAGGCTCACATCTCCGTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: WFLKADLRANGK*SGMRRLTSPFD Trigger: GTCAAACGGAGATGTGAGCCTCCGCATTCCTGACCACTTGCCATTTGCCCTCAAGTCTGCCTTCAGGAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CCA 72 bp | GAATCCAAGTCCACAGCAGTCACCTTTGTGATTAGGTaGCCAGCACCAACTGATGGAGGCAGTGCTTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: ESKSTAVTFVIR*PAPTDGGSAWG Trigger: TCCCCAAGCACTGCCTCCATCAGTTGGTGCTGGCCACCTAATCACAAAGGTGACTGCTGTGGACTTGGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CCA 72 bp | ACTACCACTATCCTTTACCACAATGACCAGCTTCTGTaGTGGGAGGTCAGCTGGGATAGGAACAGCCGTCCG | + |
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Preference number: 6 (lower is better) Translates to: TTTILYHNDQLL*WEVSWDRNSRP Trigger: CGGACGGCTGTTCCTATCCCAGCTGACCTCCCACCACAGAAGCTGGTCATTGTGGTAAAGGATAGTGGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS TCA 72 bp | CACTCTCGGGGAGGGTTCCAAGCTCTGAGGTCACTGTaGTGTAAGGGGCATTGTCATTTACGTCCAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: HSRGGFQALRSL*CKGHCHLRPAD Trigger: ATCTGCTGGACGTAAATGACAATGCCCCTTACATCACAGTGACCTCAGAGCTTGGAACCCTCCCCGAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 72 bp | CAGCCTATAGCTGCTAATCGAATTGCTCCCCACATCTaGATCCTGAGCCTTTTCCAACGGGAAACGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: QPIAANRIAPHI*ILSLFQRETLS Trigger: GGACAGCGTTTCCCGTTGGAAAAGGCTCAGGATGCAGATGTGGGGAGCAATTCGATTAGCAGCTATAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CCA 72 bp | ACATCAACAAACTTGATAGGGTCATCTGACCCTAGCTaGATTCGGAGGATCCCATTGGAAGGGGGAAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: TSTNLIGSSDPS*IRRIPLEGGSP Trigger: GGGGCTTCCCCCTTCCAATGGGATCCTCCGAATCCAGCTAGGGTCAGATGACCCTATCAAGTTTGTTGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CAA 72 bp | ATCCCGGGCCTGCACCTCAAACTGCAGTGTCTGGGTTaGCTCATAGTCAAAGGATCGAGTAGCATGAACAGC | + |
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Preference number: 6 (lower is better) Translates to: IPGLHLKLQCLG*LIVKGSSSMNS Trigger: GCTGTTCATGCTACTCGATCCTTTGACTATGAGCAAACCCAGACACTGCAGTTTGAGGTGCAGGCCCGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS CAA 90 bp | CTAGGGACACAGCCAAGTAGAGGGTTAGACGAGATTCTCCTTCCCTaGGAGCTGAAGATTCTCGAAGATCTGGGACAACTGGATGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: LGTQPSRGLDEILLP*ELKILEDLGQLDEC Trigger: ACACTCATCCAGTTGTCCCAGATCTTCGAGAATCTTCAGCTCCAAGGGAAGGAGAATCTCGTCTAACCCTCTACTTGGCTGTGTCCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 72 bp | GGGGGCGTGATCATTCACATCTACGATCTCTACCTCTaGTCGGTACATTTCCAAAGGACCTTCGGTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: GGVIIHIYDLYL*SVHFQRTFGDK Trigger: TTTGTCACCGAAGGTCCTTTGGAAATGTACCGAGCAGAGGTAGAGATCGTAGATGTGAATGATCACGCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000306593.2 ENST00000610539.1 ENST00000617094.1 |
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| CDS CAA 72 bp | GTAGTGCCACGAATGAGCCAAAGGAGACAAAGCAAATaGCCACTAGGGACACAGCCAAGTAGAGGGTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: VVPRMSQRRQSK*PLGTQPSRGLD Trigger: GTCTAACCCTCTACTTGGCTGTGTCCCTAGTGGCAATTTGCTTTGTCTCCTTTGGCTCATTCGTGGCACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS GCA 72 bp | AGAGGCCAGTACTCTCTAGGACATGGCCTAGCCATATaGCTGGATCAGAATAACCCTCAAGCATTTGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: RGQYSLGHGLAI*LDQNNPQAFVE Trigger: CTCAACAAATGCTTGAGGGTTATTCTGATCCAGGCATATGGCTAGGCCATGTCCTAGAGAGTACTGGCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617094.1 |
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| CDS TCA 72 bp | GGAGCTGAAGATTCTCGAAGATCTGGGACAACTGGATaGGTGTCTTCCTCTAAGGACACTAAGAGAGTAACA | + |
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Preference number: 6 (lower is better) Translates to: GAEDSRRSGTTG*VSSSKDTKRVT Trigger: TGTTACTCTCTTAGTGTCCTTAGAGGAAGACACTCATCCAGTTGTCCCAGATCTTCGAGAATCTTCAGCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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| CDS TCA 72 bp | CAGCGTCTACCACATAGTTACCTCTTACAAAAATGGTaGCATCACTATGGGCACTTACTGAGAGGCCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: QRLPHSYLLQKW*HHYGHLLRGQY Trigger: GTACTGGCCTCTCAGTAAGTGCCCATAGTGATGTCACCATTTTTGTAAGAGGTAACTATGTGGTAGACGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617094.1 |
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| CDS TCA 72 bp | CGATTGTTCTCAGGAACAAACACCTCATGTGACCTCTaGAAGAAAGAGGGTGGATTATCATTCACATCTGAA | + |
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Preference number: 6 (lower is better) Translates to: RLFSGTNTSCDL*KKEGGLSFTSE Trigger: TTCAGATGTGAATGATAATCCACCCTCTTTCTTTCAGAGGTCACATGAGGTGTTTGTTCCTGAGAACAATCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306593.2 ENST00000617094.1 |
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