Pregenerated sensors for PCDHGB4 (Homo sapiens)
Ensembl gene IDs: ENSG00000253953Ensembl transcript IDs: ENST00000519479.2, ENST00000615384.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CACTTTTTAGGAGAGAGCCAACAACTGTCTAACACTTTCACTTTGTaGTTAAAACCACACCCTCATTGCTTTATAAATCTAAGCTTGGCT | + |
Preference number: 1 (lower is better) Translates to: HFLGESQQLSNTFTL*LKPHPHCFINLSLA Trigger: AGCCAAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTTTAACCACAAAGTGAAAGTGTTAGACAGTTGTTGGCTCTCTCCTAAAAAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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3UTR TCA 90 bp | TGTTGGGCCACACAATTGCTCCTACTTTACTCCTCCTTTGTAGAATaGTATGACAGCTTTTTAACTGACTACAACTTTCCTAAAATGATC | + |
Preference number: 1 (lower is better) Translates to: CWATQLLLLYSSFVE*YDSFLTDYNFPKMI Trigger: GATCATTTTAGGAAAGTTGTAGTCAGTTAAAAAGCTGTCATATCATTCTACAAAGGAGGAGTAAAGTAGGAGCAATTGTGTGGCCCAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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3UTR-3UTR GCA 90 bp | ATTAGCCAGGTCTGGTGGCATGAGCCTGAGTTCCAGCTAGTCAGGAGGCTGATGAAACCACACCCTCATTaGTTTATAAATCTAAGCTTG | + |
Preference number: 2 (lower is better) Translates to: ISQVWWHEPEFQLVRRLMKPHPH*FINLSL Trigger: CAAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTT...CATCAGCCTCCTGACTAGCTGGAACTCAGGCTCATGCCACCAGACCTGGCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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3UTR-3UTR GCA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATGTTGGGCCACACAATTaGTCCTACTTTACTCCTCCT | + |
Preference number: 2 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYVGPHN*SYFTPP Trigger: AGGAGGAGTAAAGTAGGAGCAATTGTGTGGCCCAAC...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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3UTR-3UTR CCA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATAAAACAAACAAATGTTaGGCCACACAATTGCTCCTA | + |
Preference number: 2 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYKTNKC*ATQLLL Trigger: TAGGAGCAATTGTGTGGCCCAACATTTGTTTGTTTT...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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3UTR-3UTR CCA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATAACAGTGGACTACTATaGAGACCATACCAGTTAAAT | + |
Preference number: 2 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYNSGLL*RPYQLN Trigger: ATTTAACTGGTATGGTCTCCATAGTAGTCCACTGTT...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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3UTR CAA 90 bp | ATTCACTTTTTAGGAGAGAGCCAACAACTGTCTAACACTTTCACTTaGTGGTTAAAACCACACCCTCATTGCTTTATAAATCTAAGCTTG | + |
Preference number: 2 (lower is better) Translates to: IHFLGESQQLSNTFT*WLKPHPHCFINLSL Trigger: CAAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTTTAACCACAAAGTGAAAGTGTTAGACAGTTGTTGGCTCTCTCCTAAAAAGTGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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3UTR-3UTR CAA 90 bp | CACTTTCACTTTGTGGTTAAAACCACACCCTCATTGCTTTATAAATCTAAGCTTTGTTGGGCCACACAATaGCTCCTACTTTACTCCTCC | + |
Preference number: 3 (lower is better) Translates to: HFHFVVKTTPSLLYKSKLCWATQ*LLLYSS Trigger: GGAGGAGTAAAGTAGGAGCAATTGTGTGGCCCAACA...AAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTTTAACCACAAAGTGAAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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3UTR-3UTR CAA 90 bp | CACTTTCACTTTGTGGTTAAAACCACACCCTCATTGCTTTATAAATCTAAGCTTAAAAACAAACAAATGTaGGGCCACACAATTGCTCCT | + |
Preference number: 3 (lower is better) Translates to: HFHFVVKTTPSLLYKSKLKNKQM*GHTIAP Trigger: AGGAGCAATTGTGTGGCCCAACATTTGTTTGTTTTT...AAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTTTAACCACAAAGTGAAAGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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3UTR TCA 72 bp | ACACAATTGCTCCTACTTTACTCCTCCTTTGTAGAATaGTATGACAGCTTTTTAACTGACTACAACTTTCCT | + |
Preference number: 3 (lower is better) Translates to: TQLLLLYSSFVE*YDSFLTDYNFP Trigger: AGGAAAGTTGTAGTCAGTTAAAAAGCTGTCATATCATTCTACAAAGGAGGAGTAAAGTAGGAGCAATTGTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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3UTR TCA 72 bp | GAAACTCCTATGTTACAAGTAAGGAGAATCTGCTTTTaGTCTTCTAATGAGCATAGTAGACCTTTTTCTAAG | + |
Preference number: 3 (lower is better) Translates to: ETPMLQVRRICF*SSNEHSRPFSK Trigger: CTTAGAAAAAGGTCTACTATGCTCATTAGAAGATCAAAAGCAGATTCTCCTTACTTGTAACATAGGAGTTTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | ATTAGCCAGGTCTGGTGGCATGAGCCTGAGTTCCAGCTAGTCAGGAGGCTGATGAAGAGACTTGGCCGTTaGGCCCCAAGTCCGGATCAG | + |
Preference number: 4 (lower is better) Translates to: ISQVWWHEPEFQLVRRLMKRLGR*APSPDQ Trigger: CTGATCCGGACTTGGGGCCCAACGGCCAAGTCTCTT...CATCAGCCTCCTGACTAGCTGGAACTCAGGCTCATGCCACCAGACCTGGCTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR GCA 90 bp | ATTAGCCAGGTCTGGTGGCATGAGCCTGAGTTCCAGCTAGTCAGGAGGCTGATGTTGTACTCTGGATTCTaGTCGCGGTCTAGAACAGCA | + |
Preference number: 4 (lower is better) Translates to: ISQVWWHEPEFQLVRRLMLYSGF*SRSRTA Trigger: TGCTGTTCTAGACCGCGAGCAGAATCCAGAGTACAA...CATCAGCCTCCTGACTAGCTGGAACTCAGGCTCATGCCACCAGACCTGGCTAAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | ATTAGCCAGGTCTGGTGGCATGAGCCTGAGTTCCAGCTAGTCAGGAGGCTGATGAAAATTAGCCAGGTCTaGTGGCATGAGCCTGAGTTC | + |
Preference number: 4 (lower is better) Translates to: ISQVWWHEPEFQLVRRLMKISQV*WHEPEF Trigger: GAACTCAGGCTCATGCCACCAGACCTGGCTAATTTT...CATCAGCCTCCTGACTAGCTGGAACTCAGGCTCATGCCACCAGACCTGGCTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | ATTAGCCAGGTCTGGTGGCATGAGCCTGAGTTCCAGCTAGTCAGGAGGCTGATGCTGGAGCATTATCATTaGCATCAGTCACTAGAACGT | + |
Preference number: 4 (lower is better) Translates to: ISQVWWHEPEFQLVRRLMLEHYH*HQSLER Trigger: ACGTTCTAGTGACTGATGCCAATGATAATGCTCCAG...CATCAGCCTCCTGACTAGCTGGAACTCAGGCTCATGCCACCAGACCTGGCTAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR TCA 90 bp | ATTAGCCAGGTCTGGTGGCATGAGCCTGAGTTCCAGCTAGTCAGGAGGCTGATGAGGAGAATCTGCTTTTaGTCTTCTAATGAGCATAGT | + |
Preference number: 4 (lower is better) Translates to: ISQVWWHEPEFQLVRRLMRRICF*SSNEHS Trigger: ACTATGCTCATTAGAAGATCAAAAGCAGATTCTCCT...CATCAGCCTCCTGACTAGCTGGAACTCAGGCTCATGCCACCAGACCTGGCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATAGACCAGGTGCAACGTaGCAGTGGCCGAGAGTGGTG | + |
Preference number: 4 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYRPGAT*QWPRVV Trigger: CACCACTCTCGGCCACTGCCACGTTGCACCTGGTCT...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | CACTTTCACTTTGTGGTTAAAACCACACCCTCATTGCTTTATAAATCTAAGCTTGGTGCAACGTGGCAGTaGCCGAGAGTGGTGGCTGTC | + |
Preference number: 4 (lower is better) Translates to: HFHFVVKTTPSLLYKSKLGATWQ*PRVVAV Trigger: GACAGCCACCACTCTCGGCCACTGCCACGTTGCACC...AAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTTTAACCACAAAGTGAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR TCA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATTTGAGCCCAGGAGTTTaGGGCTGGAGGGAGCTATCA | + |
Preference number: 4 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYLSPGV*GWRELS Trigger: TGATAGCTCCCTCCAGCCTCAAACTCCTGGGCTCAA...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR GCA 90 bp | AATCTCATTCACTTTTTAGGAGAGAGCCAACAACTGTCTAACACTTTCACTTTGCGTGTATCTGTGCAGTaGTGCTTAGGGGTGGAGCTC | + |
Preference number: 4 (lower is better) Translates to: NLIHFLGESQQLSNTFTLRVSVQ*CLGVEL Trigger: GAGCTCCACCCCTAAGCAGCACTGCACAGATACACG...CAAAGTGAAAGTGTTAGACAGTTGTTGGCTCTCTCCTAAAAAGTGAATGAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR TCA 90 bp | CACTTTCACTTTGTGGTTAAAACCACACCCTCATTGCTTTATAAATCTAAGCTTAGAAGCCCTGACTTGTaGAATAGAGGCTCCAGGCGG | + |
Preference number: 4 (lower is better) Translates to: HFHFVVKTTPSLLYKSKLRSPDL*NRGSRR Trigger: CCGCCTGGAGCCTCTATTTCACAAGTCAGGGCTTCT...AAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTTTAACCACAAAGTGAAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | ACCTCTAGCTATATTAGTTTAGGGCTGCAGATAAGGCAGTTACACATTATATATTCACCTGTAGCACCGTaGTCCCCGGGTACACGTTTT | + |
Preference number: 4 (lower is better) Translates to: TSSYISLGLQIRQLHIIYSPVAP*SPGTRF Trigger: AAAACGTGTACCCGGGGACCACGGTGCTACAGGTGA...ATATATAATGTGTAACTGCCTTATCTGCAGCCCTAAACTAATATAGCTAGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR TCA 90 bp | AATCTCATTCACTTTTTAGGAGAGAGCCAACAACTGTCTAACACTTTCACTTTGCACTGCACTACAGCCTaGGTAACAGACAGAGACTCT | + |
Preference number: 4 (lower is better) Translates to: NLIHFLGESQQLSNTFTLHCTTA*VTDRDS Trigger: AGAGTCTCTGTCTGTTACTCAGGCTGTAGTGCAGTG...CAAAGTGAAAGTGTTAGACAGTTGTTGGCTCTCTCCTAAAAAGTGAATGAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR TCA 90 bp | ACCTCTAGCTATATTAGTTTAGGGCTGCAGATAAGGCAGTTACACATTATATATTGCAGAAGGAATGCTTaGGCCCAGGAGTTTGAGGCT | + |
Preference number: 4 (lower is better) Translates to: TSSYISLGLQIRQLHIIYCRRNA*AQEFEA Trigger: AGCCTCAAACTCCTGGGCTCAAGCATTCCTTCTGCA...ATATATAATGTGTAACTGCCTTATCTGCAGCCCTAAACTAATATAGCTAGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR TCA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATGGGCAACGTAGCAGATaGACTTATTTCACCCTTCCT | + |
Preference number: 4 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYGQRSR*TYFTLP Trigger: AGGAAGGGTGAAATAAGTTCATCTGCTACGTTGCCC...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR GCA 90 bp | ACCTCTAGCTATATTAGTTTAGGGCTGCAGATAAGGCAGTTACACATTATATATGTATCTGTGCAGTGCTaGTTAGGGGTGGAGCTCCAA | + |
Preference number: 4 (lower is better) Translates to: TSSYISLGLQIRQLHIIYVSVQC*LGVELQ Trigger: TTGGAGCTCCACCCCTAAGCAGCACTGCACAGATAC...ATATATAATGTGTAACTGCCTTATCTGCAGCCCTAAACTAATATAGCTAGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR GCA 90 bp | ACCTCTAGCTATATTAGTTTAGGGCTGCAGATAAGGCAGTTACACATTATATATACCTCCACTGTGCATTaGGCAATCATTCCTCCACCG | + |
Preference number: 4 (lower is better) Translates to: TSSYISLGLQIRQLHIIYTSTVH*AIIPPP Trigger: CGGTGGAGGAATGATTGCGCAATGCACAGTGGAGGT...ATATATAATGTGTAACTGCCTTATCTGCAGCCCTAAACTAATATAGCTAGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR GCA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATCTTCTACCTCCACTGTaGATTGCGCAATCATTCCTC | + |
Preference number: 4 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYLLPPL*IAQSFL Trigger: GAGGAATGATTGCGCAATGCACAGTGGAGGTAGAAG...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | CACTTTCACTTTGTGGTTAAAACCACACCCTCATTGCTTTATAAATCTAAGCTTAGGTTGGGTAGAGACTaGAATATCACTTCTGGGGCG | + |
Preference number: 4 (lower is better) Translates to: HFHFVVKTTPSLLYKSKLRLGRD*NITSGA Trigger: CGCCCCAGAAGTGATATTCCAGTCTCTACCCAACCT...AAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTTTAACCACAAAGTGAAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR TCA 90 bp | AATCTCATTCACTTTTTAGGAGAGAGCCAACAACTGTCTAACACTTTCACTTTGCCTTGTCACGGACTTTaGGCAAAGCAATATGTGTTC | + |
Preference number: 4 (lower is better) Translates to: NLIHFLGESQQLSNTFTLPCHGL*AKQYVF Trigger: GAACACATATTGCTTTGCTCAAAGTCCGTGACAAGG...CAAAGTGAAAGTGTTAGACAGTTGTTGGCTCTCTCCTAAAAAGTGAATGAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR GCA 90 bp | AATCTCATTCACTTTTTAGGAGAGAGCCAACAACTGTCTAACACTTTCACTTTGTCCTCCACCGTCCCTTaGTTCCAAAACTATGGAATA | + |
Preference number: 4 (lower is better) Translates to: NLIHFLGESQQLSNTFTLSSTVP*FQNYGI Trigger: TATTCCATAGTTTTGGAAGCAAGGGACGGTGGAGGA...CAAAGTGAAAGTGTTAGACAGTTGTTGGCTCTCTCCTAAAAAGTGAATGAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATTCAAATTGGGTGATCTaGCTAGCTTCACTGAAAGAG | + |
Preference number: 4 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYSNWVI*LASLKE Trigger: CTCTTTCAGTGAAGCTAGCCAGATCACCCAATTTGA...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR TCA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATCAGATTAGATCAGAATaGTCAGATTGTAGCATCGGA | + |
Preference number: 4 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYQIRSE*SDCSIG Trigger: TCCGATGCTACAATCTGATCATTCTGATCTAATCTG...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR GCA 90 bp | ACCTCTAGCTATATTAGTTTAGGGCTGCAGATAAGGCAGTTACACATTATATATCTTGCCCCGATCTGTTaGCGTAACGGTTATATTGTA | + |
Preference number: 4 (lower is better) Translates to: TSSYISLGLQIRQLHIIYLAPIC*RNGYIV Trigger: TACAATATAACCGTTACGGCAACAGATCGGGGCAAG...ATATATAATGTGTAACTGCCTTATCTGCAGCCCTAAACTAATATAGCTAGAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR GCA 90 bp | ACCTCTAGCTATATTAGTTTAGGGCTGCAGATAAGGCAGTTACACATTATATATTTTACATCACCAATGTaGAGGGTGATGCTGGAACTG | + |
Preference number: 4 (lower is better) Translates to: TSSYISLGLQIRQLHIIYFTSPM*RVMLEL Trigger: CAGTTCCAGCATCACCCTGCACATTGGTGATGTAAA...ATATATAATGTGTAACTGCCTTATCTGCAGCCCTAAACTAATATAGCTAGAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | ACCTCTAGCTATATTAGTTTAGGGCTGCAGATAAGGCAGTTACACATTATATATGAGTTCAGGTCAAATTaGGTGATCTGGCTAGCTTCA | + |
Preference number: 4 (lower is better) Translates to: TSSYISLGLQIRQLHIIYEFRSN*VIWLAS Trigger: TGAAGCTAGCCAGATCACCCAATTTGACCTGAACTC...ATATATAATGTGTAACTGCCTTATCTGCAGCCCTAAACTAATATAGCTAGAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | ACCTCTAGCTATATTAGTTTAGGGCTGCAGATAAGGCAGTTACACATTATATATCTTCTCCATTGTGTCTaGAATCCTTGTCACGGACTT | + |
Preference number: 4 (lower is better) Translates to: TSSYISLGLQIRQLHIIYLLHCV*NPCHGL Trigger: AAGTCCGTGACAAGGATTCCAGACACAATGGAGAAG...ATATATAATGTGTAACTGCCTTATCTGCAGCCCTAAACTAATATAGCTAGAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR TCA 90 bp | ACCTCTAGCTATATTAGTTTAGGGCTGCAGATAAGGCAGTTACACATTATATATTTTATCAGTGAGAAATaGTCACTGGGACTGAGTTGG | + |
Preference number: 4 (lower is better) Translates to: TSSYISLGLQIRQLHIIYFISEK*SLGLSW Trigger: CCAACTCAGTCCCAGTGATCATTTCTCACTGATAAA...ATATATAATGTGTAACTGCCTTATCTGCAGCCCTAAACTAATATAGCTAGAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR TCA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATCTCTTTATTTATCAGTaGGAAATGATCACTGGGACT | + |
Preference number: 4 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYLFIYQ*EMITGT Trigger: AGTCCCAGTGATCATTTCTCACTGATAAATAAAGAG...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR TCA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATAAAGTGGCCATTAACTaGAGCAGTTGCTTAGATATA | + |
Preference number: 4 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYKVAIN*SSCLDI Trigger: TATATCTAAGCAACTGCTTCAGTTAATGGCCACTTT...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR GCA 90 bp | AATCTCATTCACTTTTTAGGAGAGAGCCAACAACTGTCTAACACTTTCACTTTGCGAACGGACTTTAGTTaGAGTTCCAGTTCAAGAAAA | + |
Preference number: 4 (lower is better) Translates to: NLIHFLGESQQLSNTFTLRTDFS*SSSSRK Trigger: TTTTCTTGAACTGGAACTGCAACTAAAGTCCGTTCG...CAAAGTGAAAGTGTTAGACAGTTGTTGGCTCTCTCCTAAAAAGTGAATGAGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | AATCTCATTCACTTTTTAGGAGAGAGCCAACAACTGTCTAACACTTTCACTTTGCCAATATCCGCATCATaGGCAGATCCTAATATAAAT | + |
Preference number: 4 (lower is better) Translates to: NLIHFLGESQQLSNTFTLPISAS*ADPNIN Trigger: ATTTATATTAGGATCTGCCCATGATGCGGATATTGG...CAAAGTGAAAGTGTTAGACAGTTGTTGGCTCTCTCCTAAAAAGTGAATGAGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | AATCTCATTCACTTTTTAGGAGAGAGCCAACAACTGTCTAACACTTTCACTTTGAACAGTGGACTACTATaGAGACCATACCAGTTAAAT | + |
Preference number: 4 (lower is better) Translates to: NLIHFLGESQQLSNTFTLNSGLL*RPYQLN Trigger: ATTTAACTGGTATGGTCTCCATAGTAGTCCACTGTT...CAAAGTGAAAGTGTTAGACAGTTGTTGGCTCTCTCCTAAAAAGTGAATGAGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR GCA 90 bp | AATCTCATTCACTTTTTAGGAGAGAGCCAACAACTGTCTAACACTTTCACTTTGAAACCACACCCTCATTaGTTTATAAATCTAAGCTTG | + |
Preference number: 4 (lower is better) Translates to: NLIHFLGESQQLSNTFTLKPHPH*FINLSL Trigger: CAAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTT...CAAAGTGAAAGTGTTAGACAGTTGTTGGCTCTCTCCTAAAAAGTGAATGAGATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | CACTTTCACTTTGTGGTTAAAACCACACCCTCATTGCTTTATAAATCTAAGCTTAAAACAAACAAATGTTaGGCCACACAATTGCTCCTA | + |
Preference number: 4 (lower is better) Translates to: HFHFVVKTTPSLLYKSKLKTNKC*ATQLLL Trigger: TAGGAGCAATTGTGTGGCCCAACATTTGTTTGTTTT...AAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTTTAACCACAAAGTGAAAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CCA 90 bp | ACCTCTAGCTATATTAGTTTAGGGCTGCAGATAAGGCAGTTACACATTATATATGTATGCACACCAGATTaGCAGTTTTCAAGACTATAT | + |
Preference number: 4 (lower is better) Translates to: TSSYISLGLQIRQLHIIYVCTPD*QFSRLY Trigger: ATATAGTCTTGAAAACTGCCAATCTGGTGTGCATAC...ATATATAATGTGTAACTGCCTTATCTGCAGCCCTAAACTAATATAGCTAGAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR GCA 90 bp | CACTTTCACTTTGTGGTTAAAACCACACCCTCATTGCTTTATAAATCTAAGCTTTCTCAGGGTATTTACTaGCATCTGATTTCTCTTTAT | + |
Preference number: 4 (lower is better) Translates to: HFHFVVKTTPSLLYKSKLSQGIY*HLISLY Trigger: ATAAAGAGAAATCAGATGGCAGTAAATACCCTGAGA...AAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTTTAACCACAAAGTGAAAGTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | ATTAGCCAGGTCTGGTGGCATGAGCCTGAGTTCCAGCTAGTCAGGAGGCTGATGGATGCAGTAAGAGACTaGGCCGTTGGGCCCCAAGTC | + |
Preference number: 5 (lower is better) Translates to: ISQVWWHEPEFQLVRRLMDAVRD*AVGPQV Trigger: GACTTGGGGCCCAACGGCCAAGTCTCTTACTGCATC...CATCAGCCTCCTGACTAGCTGGAACTCAGGCTCATGCCACCAGACCTGGCTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | ATTAGCCAGGTCTGGTGGCATGAGCCTGAGTTCCAGCTAGTCAGGAGGCTGATGTGGAGGGAGCTATCATaGTGCCACTGCACTACAGCC | + |
Preference number: 5 (lower is better) Translates to: ISQVWWHEPEFQLVRRLMWRELS*CHCTTA Trigger: GGCTGTAGTGCAGTGGCACAATGATAGCTCCCTCCA...CATCAGCCTCCTGACTAGCTGGAACTCAGGCTCATGCCACCAGACCTGGCTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | ATTAGCCAGGTCTGGTGGCATGAGCCTGAGTTCCAGCTAGTCAGGAGGCTGATGTCCTCCATAATTAGGTaGGGTAGAGACTGGAATATC | + |
Preference number: 5 (lower is better) Translates to: ISQVWWHEPEFQLVRRLMSSIIR*GRDWNI Trigger: GATATTCCAGTCTCTACCCAACCTAATTATGGAGGA...CATCAGCCTCCTGACTAGCTGGAACTCAGGCTCATGCCACCAGACCTGGCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | ATTAGCCAGGTCTGGTGGCATGAGCCTGAGTTCCAGCTAGTCAGGAGGCTGATGAAAAACAAACAAATGTaGGGCCACACAATTGCTCCT | + |
Preference number: 5 (lower is better) Translates to: ISQVWWHEPEFQLVRRLMKNKQM*GHTIAP Trigger: AGGAGCAATTGTGTGGCCCAACATTTGTTTGTTTTT...CATCAGCCTCCTGACTAGCTGGAACTCAGGCTCATGCCACCAGACCTGGCTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | ATTAGCCAGGTCTGGTGGCATGAGCCTGAGTTCCAGCTAGTCAGGAGGCTGATGTCTAACACTTTCACTTaGTGGTTAAAACCACACCCT | + |
Preference number: 5 (lower is better) Translates to: ISQVWWHEPEFQLVRRLMSNTFT*WLKPHP Trigger: AGGGTGTGGTTTTAACCACAAAGTGAAAGTGTTAGA...CATCAGCCTCCTGACTAGCTGGAACTCAGGCTCATGCCACCAGACCTGGCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | ATTAGCCAGGTCTGGTGGCATGAGCCTGAGTTCCAGCTAGTCAGGAGGCTGATGTGTATGCACACCAGATaGGCAGTTTTCAAGACTATA | + |
Preference number: 5 (lower is better) Translates to: ISQVWWHEPEFQLVRRLMCMHTR*AVFKTI Trigger: TATAGTCTTGAAAACTGCCAATCTGGTGTGCATACA...CATCAGCCTCCTGACTAGCTGGAACTCAGGCTCATGCCACCAGACCTGGCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATGCCGTAACGGTTATATaGTACTCTGGATTCTGCTCG | + |
Preference number: 5 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYAVTVI*YSGFCS Trigger: CGAGCAGAATCCAGAGTACAATATAACCGTTACGGC...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | AATCTCATTCACTTTTTAGGAGAGAGCCAACAACTGTCTAACACTTTCACTTTGTGTTGGGCCACACAATaGCTCCTACTTTACTCCTCC | + |
Preference number: 5 (lower is better) Translates to: NLIHFLGESQQLSNTFTLCWATQ*LLLYSS Trigger: GGAGGAGTAAAGTAGGAGCAATTGTGTGGCCCAACA...CAAAGTGAAAGTGTTAGACAGTTGTTGGCTCTCTCCTAAAAAGTGAATGAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | AATCTCATTCACTTTTTAGGAGAGAGCCAACAACTGTCTAACACTTTCACTTTGAGAGTTCAGGTCAAATaGGGTGATCTGGCTAGCTTC | + |
Preference number: 5 (lower is better) Translates to: NLIHFLGESQQLSNTFTLRVQVK*GDLASF Trigger: GAAGCTAGCCAGATCACCCAATTTGACCTGAACTCT...CAAAGTGAAAGTGTTAGACAGTTGTTGGCTCTCTCCTAAAAAGTGAATGAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATTTGTGTCTGGAATCCTaGTCACGGACTTTGAGCAAA | + |
Preference number: 5 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYLCLES*SRTLSK Trigger: TTTGCTCAAAGTCCGTGACAAGGATTCCAGACACAA...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATCAAGTCACTTCTCCATaGTGTCTGGAATCCTTGTCA | + |
Preference number: 5 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYQVTSP*CLESLS Trigger: TGACAAGGATTCCAGACACAATGGAGAAGTGACTTG...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | CACTTTCACTTTGTGGTTAAAACCACACCCTCATTGCTTTATAAATCTAAGCTTTTCCTCCACCGTCCCTaGCTTCCAAAACTATGGAAT | + |
Preference number: 5 (lower is better) Translates to: HFHFVVKTTPSLLYKSKLFLHRP*LPKLWN Trigger: ATTCCATAGTTTTGGAAGCAAGGGACGGTGGAGGAA...AAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTTTAACCACAAAGTGAAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | CACTTTCACTTTGTGGTTAAAACCACACCCTCATTGCTTTATAAATCTAAGCTTATCACTGGGACTGAGTaGGTAATTCTGCAGTGTGTT | + |
Preference number: 5 (lower is better) Translates to: HFHFVVKTTPSLLYKSKLITGTE*VILQCV Trigger: AACACACTGCAGAATTACCAACTCAGTCCCAGTGAT...AAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTTTAACCACAAAGTGAAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | CACTTTCACTTTGTGGTTAAAACCACACCCTCATTGCTTTATAAATCTAAGCTTATCACTTCTGGGGCGTaGTCATTTTCATCTATGACT | + |
Preference number: 5 (lower is better) Translates to: HFHFVVKTTPSLLYKSKLITSGA*SFSSMT Trigger: AGTCATAGATGAAAATGACAACGCCCCAGAAGTGAT...AAGCTTAGATTTATAAAGCAATGAGGGTGTGGTTTTAACCACAAAGTGAAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | ACCTCTAGCTATATTAGTTTAGGGCTGCAGATAAGGCAGTTACACATTATATATTCCTTGTCACGGACTTaGAGCAAAGCAATATGTGTT | + |
Preference number: 5 (lower is better) Translates to: TSSYISLGLQIRQLHIIYSLSRT*SKAICV Trigger: AACACATATTGCTTTGCTCAAAGTCCGTGACAAGGA...ATATATAATGTGTAACTGCCTTATCTGCAGCCCTAAACTAATATAGCTAGAGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS-3UTR CAA 90 bp | ACTGCATATAATCACAAGGGGTCCATGGACATAAAAATCCAGTTGACTCCTTATTATTTCACCCTTCCTTaGAAGACTGGTATGATAGTT | + |
Preference number: 5 (lower is better) Translates to: TAYNHKGSMDIKIQLTPYYFTLP*KTGMIV Trigger: AACTATCATACCAGTCTTCAAAGGAAGGGTGAAATA...ATAAGGAGTCAACTGGATTTTTATGTCCATGGACCCCTTGTGATTATATGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000615384.1 |
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CDS CCA 72 bp | CGGGTCTCTGGGCCTGAGAGAAACGCCAGTCCGTGTTaGGCGGGGCTTGCTGATGGGAAGTCAATTCACTGG | + |
Preference number: 6 (lower is better) Translates to: RVSGPERNASPC*AGLADGKSIHW Trigger: CCAGTGAATTGACTTCCCATCAGCAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519479.2 |
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CDS TCA 72 bp | CTTCTCCATTGTGTCTGGAATCCTTGTCACGGACTTTaGGCAAAGCAATATGTGTTCCCAGCTCGGCGTCCT | + |
Preference number: 6 (lower is better) Translates to: LLHCVWNPCHGL*AKQYVFPARRP Trigger: AGGACGCCGAGCTGGGAACACATATTGCTTTGCTCAAAGTCCGTGACAAGGATTCCAGACACAATGGAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519479.2 ENST00000615384.1 |
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CDS CAA 72 bp | ATATGTGTTCCCAGCTCGGCGTCCTCCATAATTAGGTaGGGTAGAGACTGGAATATCACTTCTGGGGCGTTG | + |
Preference number: 6 (lower is better) Translates to: ICVPSSASSIIR*GRDWNITSGAL Trigger: CAACGCCCCAGAAGTGATATTCCAGTCTCTACCCAACCTAATTATGGAGGACGCCGAGCTGGGAACACATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519479.2 ENST00000615384.1 |
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CDS CCA 72 bp | TCCCCGGTGTTAGAGTTCAGGTCAAATTGGGTGATCTaGCTAGCTTCACTGAAAGAGAAAGTAATCTCGGCA | + |
Preference number: 6 (lower is better) Translates to: SPVLEFRSNWVI*LASLKEKVISA Trigger: TGCCGAGATTACTTTCTCTTTCAGTGAAGCTAGCCAGATCACCCAATTTGACCTGAACTCTAACACCGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519479.2 ENST00000615384.1 |
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CDS GCA 72 bp | CACTGTGCATTGCGCAATCATTCCTCCACCGTCCCTTaGTTCCAAAACTATGGAATATTCTTTGACTTCTTC | + |
Preference number: 6 (lower is better) Translates to: HCALRNHSSTVP*FQNYGIFFDFF Trigger: GAAGAAGTCAAAGAATATTCCATAGTTTTGGAAGCAAGGGACGGTGGAGGAATGATTGCGCAATGCACAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519479.2 ENST00000615384.1 |
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CDS GCA 72 bp | TCTGTTGCCGTAACGGTTATATTGTACTCTGGATTCTaGTCGCGGTCTAGAACAGCATCTGTCACTAATTTA | + |
Preference number: 6 (lower is better) Translates to: SVAVTVILYSGF*SRSRTASVTNL Trigger: TAAATTAGTGACAGATGCTGTTCTAGACCGCGAGCAGAATCCAGAGTACAATATAACCGTTACGGCAACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519479.2 ENST00000615384.1 |
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CDS CCA 72 bp | ACAGTAATTTCCCCGGTGTTAGAGTTCAGGTCAAATTaGGTGATCTGGCTAGCTTCACTGAAAGAGAAAGTA | + |
Preference number: 6 (lower is better) Translates to: TVISPVLEFRSN*VIWLASLKEKV Trigger: TACTTTCTCTTTCAGTGAAGCTAGCCAGATCACCCAATTTGACCTGAACTCTAACACCGGGGAAATTACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519479.2 ENST00000615384.1 |
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CDS CAA 72 bp | AACAGTAATTTCCCCGGTGTTAGAGTTCAGGTCAAATaGGGTGATCTGGCTAGCTTCACTGAAAGAGAAAGT | + |
Preference number: 6 (lower is better) Translates to: NSNFPGVRVQVK*GDLASFTERES Trigger: ACTTTCTCTTTCAGTGAAGCTAGCCAGATCACCCAATTTGACCTGAACTCTAACACCGGGGAAATTACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519479.2 ENST00000615384.1 |
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CDS CAA 72 bp | GGAACATCACCTTCCAATTTACAAGTCACTTCTCCATaGTGTCTGGAATCCTTGTCACGGACTTTGAGCAAA | + |
Preference number: 6 (lower is better) Translates to: GTSPSNLQVTSP*CLESLSRTLSK Trigger: TTTGCTCAAAGTCCGTGACAAGGATTCCAGACACAATGGAGAAGTGACTTGTAAATTGGAAGGTGATGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519479.2 ENST00000615384.1 |
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CDS CAA 72 bp | AATTTACAAGTCACTTCTCCATTGTGTCTGGAATCCTaGTCACGGACTTTGAGCAAAGCAATATGTGTTCCC | + |
Preference number: 6 (lower is better) Translates to: NLQVTSPLCLES*SRTLSKAICVP Trigger: GGGAACACATATTGCTTTGCTCAAAGTCCGTGACAAGGATTCCAGACACAATGGAGAAGTGACTTGTAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519479.2 ENST00000615384.1 |