Pregenerated sensors for PCDHGB2 (Homo sapiens)
Ensembl gene IDs: ENSG00000253910Ensembl transcript IDs: ENST00000522605.2, ENST00000622527.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATACCGCAGCTTCCGGGCTaGCAAGTCCCGGACGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIPQLPG*QVPDAE Trigger: CTCAGCGTCCGGGACTTGCCAGCCCGGAAGCTGCGG...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATGGGTCGTGCCACTTTaGGGTGGGTCTCCGCCATCC | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIWVVPL*GGSPPS Trigger: GGATGGCGGAGACCCACCTCAAAGTGGCACGACCCA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR GCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAAAGGGCAACAGTACCTaGAGCCACCGCACCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIKGNST*SHRTSP Trigger: CGGGCTGGTGCGGTGGCTGCAGGTACTGTTGCCCTT...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATACAGCCCGCACCTCCCTaGGCTCGCTTTCATCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIQPAPP*ARFHLL Trigger: CAGAAGATGAAAGCGAGCTCAGGGAGGTGCGGGCTG...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATACGTGCCACTTTGAGGTaGGTCTCCGCCATCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIRATLR*VSAIHS Trigger: GCTGTGGATGGCGGAGACCCACCTCAAAGTGGCACG...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATCGGTGGCTGTCACTTaGAGCACAAAGAAGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKISVAVT*STKKPG Trigger: GCCGGGCTTCTTTGTGCTTCAAGTGACAGCCACCGA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAAGGAAACTTGGCCACTaGGGCCCAAGTCAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIRKLGH*GPSQGQ Trigger: CTGACCCTGACTTGGGCCCCAGTGGCCAAGTTTCCT...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATACCCAAGCATCTGACCTaGAAGAGAGTCGCAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIPKHLT*KRVAGA Trigger: TGCGCCTGCGACTCTCTTCCAGGTCAGATGCTTGGG...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATCAGAGGCACTGATTTaGGCGATAGAGGCGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKISEALI*AIEAPG Trigger: TCCTGGCGCCTCTATCGCTCAAATCAGTGCCTCTGA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGTCCAGGCTTGGAGCTaGGACCAGGCTGAAAACAGT | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIVQAWS*DQAENS Trigger: ACTGTTTTCAGCCTGGTCTCAGCTCCAAGCCTGGAC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR GCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATCACAGACGAGATCTTaGGCGGGAACCAATTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKISQTRS*AGTNSG Trigger: CCCGGAATTGGTTCCCGCGCAAGATCTCGTCTGTGA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGTTAGGACCAACATCTaGATCCAGGGCTGGGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIVRTNI*IQGWVK Trigger: CTTGACCCAGCCCTGGATTCAGATGTTGGTCCTAAC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATACGGAGATGTGCAGGGTaGCAATTATGCTGGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIRRCAG*QLCWRR Trigger: TCTCCTCCAGCATAATTGTCACCCTGCACATCTCCG...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGAGCTGAGACCAGGCTaGAAACAGTCCCAAGCATCT | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIELRPG*KQSQAS Trigger: AGATGCTTGGGACTGTTTTCAGCCTGGTCTCAGCTC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR GCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATCTTCTGGCTCCCTTTaGTCCTTTGCCCATAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKISSGSL*SFAHRR Trigger: CCTCCTATGGGCAAAGGAGCAAAGGGAGCCAGAAGA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR GCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATTCGGATTTGGGTCGTaGCACTTTGAGGTGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIFGFGS*HFEVGL Trigger: GAGACCCACCTCAAAGTGGCACGACCCAAATCCGAA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATACGCCATCCACAGCTGTaGGGACCAATTGATGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIRHPQL*GPIDVN Trigger: GTTTACATCAATTGGTCCTCACAGCTGTGGATGGCG...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR GCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGGAGTAGGTGATCTCTaGGTTTATGCCTTCATCCCG | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIGVGDL*VYAFIP Trigger: CGGGATGAAGGCATAAACGCAGAGATCACCTACTCC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATACTACGACCGAGTTTTTaGCCAGCTCCTCTGGAATTG | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKILRPSF*PAPLEL Trigger: CAATTCCAGAGGAGCTGGCCAAAAACTCGGTCGTAG...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATACAGGGCTGGGTCAAGTaGAAATGTTGTACCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIQGWVK*KCCTWL Trigger: AAGCCAGGTACAACATTTCCACTTGACCCAGCCCTG...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAACTTGGATACTGCAGTaGGCTGCTAGATCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKITWILQ*AARSPG Trigger: TCCTGGAGATCTAGCAGCCCACTGCAGTATCCAAGT...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAACCCCAGCGGCTCCATaGTTTGTATTTTGTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKITPAAP*FVFCSQ Trigger: TTGGGAACAAAATACAAATCATGGAGCCGCTGGGGT...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR GCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAAGAACACACAGAGGCTaGTTCCCGCATATCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIRTHRG*FPHICS Trigger: AGAACAGATATGCGGGAAGCAGCCTCTGTGTGTTCT...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR GCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATTGACGTCGGAGATGTaGAGGGTGACAATTATGCTG | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKILTSEM*RVTIML Trigger: CAGCATAATTGTCACCCTGCACATCTCCGACGTCAA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR GCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAAGGAGGATTGTTCTCTaGCACGTGAACCATGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIRRIVL*HVNHVG Trigger: TCCTACATGGTTCACGTGGCAGAGAACAATCCTCCT...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATTTCTGGGTTTACTGTaGAATATTCCTTCTCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIFLGLL*NIPSPR Trigger: GCGCGGAGAAGGAATATTTCACAGTAAACCCAGAAA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR GCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATTTCAACTTGGATACTaGAGTGGGCTGCTAGATCTC | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIFQLGY*SGLLDL Trigger: GAGATCTAGCAGCCCACTGCAGTATCCAAGTTGAAA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATATGAAAGGAGTAGGTaGTCTCTGCGTTTATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIYERSR*SLRLCL Trigger: AAGGCATAAACGCAGAGATCACCTACTCCTTTCATA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATGGAAATGTTGTACCTaGCTTAGTGGATTCGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIWKCCT*LSGFAN Trigger: ATTGGCGAATCCACTAAGCCAGGTACAACATTTCCA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAATATTTACGACCATCTaGAGTCTGTTTCTCAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIIFTTI*SLFLSE Trigger: CTCGCTGAGAAACAGACTCCAGATGGTCGTAAATAT...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATCAAGAATTTCAACTTaGATACTGCAGTGGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKISRIST*ILQWAA Trigger: AGCAGCCCACTGCAGTATCCAAGTTGAAATTCTTGA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR GCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAATCTCCAGGATCTTTTaGTTCGATACTCAGAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIISRIF*FDTQSV Trigger: TACACTCTGAGTATCGAAGCAAAAGATCCTGGAGAT...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR TCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATACCTACCCAAATTAGGTaGAACAATAAAACCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKIPTQIR*NNKTRS Trigger: ACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGG...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CCA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATCGTTGTCATTAAGGTaGTATCTTTGTAGTGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: QWNFLPKLGETIKPEVKISLSLR*YLCSEL Trigger: TAACTCACTACAAAGATACCACCTTAATGACAACGA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS TCA 90 bp | CGAGATCTTGCGCGGGAACCAATTCCGGGGTTATGTTCAGAAAATTaGACTCTGTCTTGGCTGATTGTGAGGCAACACACAGGTTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: RDLAREPIPGLCSEN*TLSWLIVRQHTGCR Trigger: CCTACAACCTGTGTGTTGCCTCACAATCAGCCAAGACAGAGTTCAATTTTCTGAACATAACCCCGGAATTGGTTCCCGCGCAAGATCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CCA 90 bp | GGTGCACAATCGTTGTCATCAAGAATTTCAACTTGGATACTGCAGTaGGCTGCTAGATCTCCAGGATCTTTTGCTTCGATACTCAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: GAQSLSSRISTWILQ*AARSPGSFASILRV Trigger: CACTCTGAGTATCGAAGCAAAAGATCCTGGAGATCTAGCAGCCCACTGCAGTATCCAAGTTGAAATTCTTGATGACAACGATTGTGCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATTGGGTCGTGCCACTTaGAGGTGGGTCTCCGCCATC | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKILGRAT*RWVSAI Trigger: GATGGCGGAGACCCACCTCAAAGTGGCACGACCCAA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS GCA 90 bp | CTTCAGGTGCACAATCGTTGTCATCAAGAATTTCAACTTGGATACTaGAGTGGGCTGCTAGATCTCCAGGATCTTTTGCTTCGATACTCA | + |
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Preference number: 5 (lower is better) Translates to: LQVHNRCHQEFQLGY*SGLLDLQDLLLRYS Trigger: TGAGTATCGAAGCAAAAGATCCTGGAGATCTAGCAGCCCACTGCAGTATCCAAGTTGAAATTCTTGATGACAACGATTGTGCACCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CCA 90 bp | GGAGTCTGTTTCTCAGCGAGATCAAAGTACTCGTTGTCATTAAGGTaGTATCTTTGTAGTGAGTTAGGACCAACATCTGAATCCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GVCFSARSKYSLSLR*YLCSELGPTSESRA Trigger: AGCCCTGGATTCAGATGTTGGTCCTAACTCACTACAAAGATACCACCTTAATGACAACGAGTACTTTGATCTCGCTGAGAAACAGACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGTCGGTGGCTGTCACTaGAAGCACAAAGAAGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIVGGCH*KHKEAR Trigger: CCGGGCTTCTTTGTGCTTCAAGTGACAGCCACCGAC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGTCAGAGGCACTGATTaGAGCGATAGAGGCGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIVRGTD*SDRGAR Trigger: CCTGGCGCCTCTATCGCTCAAATCAGTGCCTCTGAC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGATGGAGTAGGAAACTaGGCCACTGGGGCCCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIDGVGN*ATGAQV Trigger: GACTTGGGCCCCAGTGGCCAAGTTTCCTACTCCATC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGTCACAGACGAGATCTaGCGCGGGAACCAATTCCGG | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIVTDEI*RGNQFR Trigger: CCGGAATTGGTTCCCGCGCAAGATCTCGTCTGTGAC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS CCA 90 bp | ACAATAACTTCAGGTGCACAATCGTTGTCATCAAGAATTTCAACTTaGATACTGCAGTGGGCTGCTAGATCTCCAGGATCTTTTGCTTCG | + |
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Preference number: 5 (lower is better) Translates to: TITSGAQSLSSRIST*ILQWAARSPGSFAS Trigger: CGAAGCAAAAGATCCTGGAGATCTAGCAGCCCACTGCAGTATCCAAGTTGAAATTCTTGATGACAACGATTGTGCACCTGAAGTTATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATACCTACGACCGAGTTTTaGGCCAGCTCCTCTGGAATT | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIPTTEF*ASSSGI Trigger: AATTCCAGAGGAGCTGGCCAAAAACTCGGTCGTAGG...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGACTTTGATTCGGATTaGGGTCGTGCCACTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIDFDSD*GRATLR Trigger: CCTCAAAGTGGCACGACCCAAATCCGAATCAAAGTC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATTGGCATCCGTGACTTaGATTCGGATTTGGGTCGTG | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKILASVT*IRIWVV Trigger: CACGACCCAAATCCGAATCAAAGTCACGGATGCCAA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATGTTCCCAAGAGGCATaGTCACAGACGAGATCTTGC | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKICSQEA*SQTRSC Trigger: GCAAGATCTCGTCTGTGACAATGCCTCTTGGGAACA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAACTGGAGGGTTATCGTaGGCATCCGTGACTTTGATT | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKITGGLS*ASVTLI Trigger: AATCAAAGTCACGGATGCCAACGATAACCCTCCAGT...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGATCTCCAGGATCTTTaGCTTCGATACTCAGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIDLQDL*LRYSEC Trigger: ACACTCTGAGTATCGAAGCAAAAGATCCTGGAGATC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAATCAAGAATTTCAACTaGGATACTGCAGTGGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIIKNFN*DTAVGC Trigger: GCAGCCCACTGCAGTATCCAAGTTGAAATTCTTGAT...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGGCATTTCCCAACACTaGGCAGTAAACTTCTCCATT | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIGISQH*AVNFSI Trigger: AATGGAGAAGTTTACTGCCAAGTGTTGGGAAATGCC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATACATGTAGGAAGTCTGTaGGAAAACTGGGGCATTATC | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIHVGSL*ENWGII Trigger: GATAATGCCCCAGTTTTCCAACAGACTTCCTACATG...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAAAATTGAACTCTGTCTaGGCTGATTGTGAGGCAACA | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIKLNSV*ADCEAT Trigger: TGTTGCCTCACAATCAGCCAAGACAGAGTTCAATTT...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATATCAGGTGCACAATCGTaGTCATCAAGAATTTCAACT | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKISGAQS*SSRIST Trigger: AGTTGAAATTCTTGATGACAACGATTGTGCACCTGA...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAAGATCAAAGTACTCGTaGTCATTAAGGTGGTATCTT | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIRSKYS*SLRWYL Trigger: AAGATACCACCTTAATGACAACGAGTACTTTGATCT...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGATTTCAAAATAAACTaGGCATTTCCCAACACTTGG | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIDFKIN*AFPNTW Trigger: CCAAGTGTTGGGAAATGCCAAGTTTATTTTGAAATC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS-3UTR CAA 90 bp | CAGTGGAACTTCCTACCCAAATTAGGTGAAACAATAAAACCAGAAGTGAAAATAGTTATGTTCAGAAAATaGAACTCTGTCTTGGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: QWNFLPKLGETIKPEVKIVMFRK*NSVLAD Trigger: ATCAGCCAAGACAGAGTTCAATTTTCTGAACATAAC...TATTTTCACTTCTGGTTTTATTGTTTCACCTAATTTGGGTAGGAAGTTCCACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000622527.1 |
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| CDS TCA 72 bp | GCGCGGGAACCAATTCCGGGGTTATGTTCAGAAAATTaGACTCTGTCTTGGCTGATTGTGAGGCAACACACA | + |
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Preference number: 6 (lower is better) Translates to: AREPIPGLCSEN*TLSWLIVRQHT Trigger: TGTGTGTTGCCTCACAATCAGCCAAGACAGAGTTCAATTTTCTGAACATAACCCCGGAATTGGTTCCCGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS GCA 72 bp | TTTTGTTCCCAAGAGGCATTGTCACAGACGAGATCTTaGGCGGGAACCAATTCCGGGGTTATGTTCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: FCSQEALSQTRS*AGTNSGVMFRK Trigger: TTTTCTGAACATAACCCCGGAATTGGTTCCCGCGCAAGATCTCGTCTGTGACAATGCCTCTTGGGAACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CAA 72 bp | ATTTTGTTCCCAAGAGGCATTGTCACAGACGAGATCTaGCGCGGGAACCAATTCCGGGGTTATGTTCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: ILFPRGIVTDEI*RGNQFRGYVQK Trigger: TTTCTGAACATAACCCCGGAATTGGTTCCCGCGCAAGATCTCGTCTGTGACAATGCCTCTTGGGAACAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CCA 72 bp | TCAGGTGCACAATCGTTGTCATCAAGAATTTCAACTTaGATACTGCAGTGGGCTGCTAGATCTCCAGGATCT | + |
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Preference number: 6 (lower is better) Translates to: SGAQSLSSRIST*ILQWAARSPGS Trigger: AGATCCTGGAGATCTAGCAGCCCACTGCAGTATCCAAGTTGAAATTCTTGATGACAACGATTGTGCACCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CAA 72 bp | GGATACTGCAGTGGGCTGCTAGATCTCCAGGATCTTTaGCTTCGATACTCAGAGTGTAACTACTTGCAATCT | + |
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Preference number: 6 (lower is better) Translates to: GYCSGLLDLQDL*LRYSECNYLQS Trigger: AGATTGCAAGTAGTTACACTCTGAGTATCGAAGCAAAAGATCCTGGAGATCTAGCAGCCCACTGCAGTATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CAA 90 bp | AGGGGAGTAGATACTGAAGTCACAATAACTTCAGGTGCACAATCGTaGTCATCAAGAATTTCAACTTGGATACTGCAGTGGGCTGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: RGVDTEVTITSGAQS*SSRISTWILQWAAR Trigger: TCTAGCAGCCCACTGCAGTATCCAAGTTGAAATTCTTGATGACAACGATTGTGCACCTGAAGTTATTGTGACTTCAGTATCTACTCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS GCA 72 bp | CACAATCGTTGTCATCAAGAATTTCAACTTGGATACTaGAGTGGGCTGCTAGATCTCCAGGATCTTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: HNRCHQEFQLGY*SGLLDLQDLLL Trigger: AAGCAAAAGATCCTGGAGATCTAGCAGCCCACTGCAGTATCCAAGTTGAAATTCTTGATGACAACGATTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CCA 72 bp | TCGTTGTCATCAAGAATTTCAACTTGGATACTGCAGTaGGCTGCTAGATCTCCAGGATCTTTTGCTTCGATA | + |
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Preference number: 6 (lower is better) Translates to: SLSSRISTWILQ*AARSPGSFASI Trigger: TATCGAAGCAAAAGATCCTGGAGATCTAGCAGCCCACTGCAGTATCCAAGTTGAAATTCTTGATGACAACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CAA 90 bp | TTACGACCATCTGGAGTCTGTTTCTCAGCGAGATCAAAGTACTCGTaGTCATTAAGGTGGTATCTTTGTAGTGAGTTAGGACCAACATCT | + |
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Preference number: 6 (lower is better) Translates to: LRPSGVCFSARSKYS*SLRWYLCSELGPTS Trigger: AGATGTTGGTCCTAACTCACTACAAAGATACCACCTTAATGACAACGAGTACTTTGATCTCGCTGAGAAACAGACTCCAGATGGTCGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CAA 90 bp | TTTCAACTTGGATACTGCAGTGGGCTGCTAGATCTCCAGGATCTTTaGCTTCGATACTCAGAGTGTAACTACTTGCAATCTCAAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: FQLGYCSGLLDLQDL*LRYSECNYLQSQNP Trigger: TGGATTTTGAGATTGCAAGTAGTTACACTCTGAGTATCGAAGCAAAAGATCCTGGAGATCTAGCAGCCCACTGCAGTATCCAAGTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CAA 72 bp | TCTGGAGTCTGTTTCTCAGCGAGATCAAAGTACTCGTaGTCATTAAGGTGGTATCTTTGTAGTGAGTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: SGVCFSARSKYS*SLRWYLCSELG Trigger: TCCTAACTCACTACAAAGATACCACCTTAATGACAACGAGTACTTTGATCTCGCTGAGAAACAGACTCCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CCA 72 bp | TTCTCAGCGAGATCAAAGTACTCGTTGTCATTAAGGTaGTATCTTTGTAGTGAGTTAGGACCAACATCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FSARSKYSLSLR*YLCSELGPTSE Trigger: TTCAGATGTTGGTCCTAACTCACTACAAAGATACCACCTTAATGACAACGAGTACTTTGATCTCGCTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CAA 72 bp | GATACTGAAGTCACAATAACTTCAGGTGCACAATCGTaGTCATCAAGAATTTCAACTTGGATACTGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: DTEVTITSGAQS*SSRISTWILQW Trigger: CCACTGCAGTATCCAAGTTGAAATTCTTGATGACAACGATTGTGCACCTGAAGTTATTGTGACTTCAGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CAA 72 bp | GGAAGATTTCAAAATAAACTTGGCATTTCCCAACACTaGGCAGTAAACTTCTCCATTTTCTCCAGAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GRFQNKLGISQH*AVNFSIFSRVS Trigger: AGAGACTCTGGAGAAAATGGAGAAGTTTACTGCCAAGTGTTGGGAAATGCCAAGTTTATTTTGAAATCTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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| CDS CAA 90 bp | CCTGGCTTAGTGGATTCGCCAATTTTTAAATTAATCTTAGTCTGTTaGAATAGCGGGGTATTATCATTTATATCCTGCACAATTACTGCT | + |
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Preference number: 6 (lower is better) Translates to: PGLVDSPIFKLILVC*NSGVLSFISCTITA Trigger: AGCAGTAATTGTGCAGGATATAAATGATAATACCCCGCTATTCAAACAGACTAAGATTAATTTAAAAATTGGCGAATCCACTAAGCCAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000522605.2 ENST00000622527.1 |
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