Pregenerated sensors for PCDHGA6 (Homo sapiens)
Ensembl gene IDs: ENSG00000253731Ensembl transcript IDs: ENST00000517434.3, ENST00000610583.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTaGAGTGAGCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: GRLRQENGVNPGSGA*SEPRLRHCSPQSGL Trigger: CAGGCCGGACTGCGGACTGCAGTGGCGCAATCTCGGCTCACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR-3UTR CCA 90 bp | TTTAACACCAAAGATCTGGTGTCCCCTGCTGCAGTTACCAATGATTCTTATCTTCTGGTCTCAAACTCCTaGTCTCAAGGGATCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: FNTKDLVSPAAVTNDSYLLVSNS*SQGILL Trigger: CAGGAGGATCCCTTGAGACCAGGAGTTTGAGACCAG...AAGATAAGAATCATTGGTAACTGCAGCAGGGGACACCAGATCTTTGGTGTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCCATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGAGCTCACTGCAACCTCTaGCTCATGGGTTCAAGCGAT | + |
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Preference number: 2 (lower is better) Translates to: FSHSPVSHLFLEICPVSRAHCNL*LMGSSD Trigger: ATCGCTTGAACCCATGAGGCAGAGGTTGCAGTGAGC...TCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATGGGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR-3UTR TCA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACAGCTGATGAGCCTGTCTaGTTAGTTGGGTTGCGGGAA | + |
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Preference number: 2 (lower is better) Translates to: TVDNRISYLLSDPFSIRTADEPV*LVGLRE Trigger: TTCCCGCAACCCAACTAATCAGACAGGCTCATCAGC...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCCATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACAGGCTAGGGTGCAGTaGCACAATTATATCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: FSHSPVSHLFLEICPVSRQARVQ*HNYISL Trigger: CAGTGAGATATAATTGTGTCACTGCACCCTAGCCTG...TCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATGGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR-3UTR CCA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACATTAACACCAAAGATCTaGTGTCCCCTGCTGCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: TVDNRISYLLSDPFSIRTLTPKI*CPLLQL Trigger: TAACTGCAGCAGGGGACACCAGATCTTTGGTGTTAA...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR-3UTR TCA 90 bp | TTTAACACCAAAGATCTGGTGTCCCCTGCTGCAGTTACCAATGATTCTTATCTTGAAAGATCTCTTGTATaGACGTCTGTCGTTTATAGT | + |
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Preference number: 2 (lower is better) Translates to: FNTKDLVSPAAVTNDSYLERSLV*TSVVYS Trigger: ACTATAAACGACAGACGTTCATACAAGAGATCTTTC...AAGATAAGAATCATTGGTAACTGCAGCAGGGGACACCAGATCTTTGGTGTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR-3UTR GCA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACAGGCACACAGCATCGGTaGTTAGTTATTGTTAACAAC | + |
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Preference number: 2 (lower is better) Translates to: TVDNRISYLLSDPFSIRTGTQHR*LVIVNN Trigger: GTTGTTAACAATAACTAAGCACCGATGCTGTGTGCC...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR GCA 72 bp | CCCAGGCTAGGGTGCAGTGACACAATTATATCTCACTaGAGCCTCATACCCCTGGACTTAAGCAATCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: PRLGCSDTIISH*SLIPLDLSNPP Trigger: AGGAGGATTGCTTAAGTCCAGGGGTATGAGGCTGCAGTGAGATATAATTGTGTCACTGCACCCTAGCCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR CCA 72 bp | CTTAAGCAATCCTCCTATCAGAGCTTCTCGAGTAGCTaGGACTACAGGTGTACGCCACACATCTGGCTACTT | + |
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Preference number: 3 (lower is better) Translates to: LKQSSYQSFSSS*DYRCTPHIWLL Trigger: AAGTAGCCAGATGTGTGGCGTACACCTGTAGTCCCAGCTACTCGAGAAGCTCTGATAGGAGGATTGCTTAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR CCA 72 bp | GCCCTGGATACACACTCTATAAGCAGCAGTTACAGGTaGATTTTTACTCCAGACTGGGCAACAGAGGGGGAT | + |
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Preference number: 3 (lower is better) Translates to: ALDTHSISSSYR*IFTPDWATEGD Trigger: ATCCCCCTCTGTTGCCCAGTCTGGAGTAAAAATCCACCTGTAACTGCTGCTTATAGAGTGTGTATCCAGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR GCA 72 bp | GCTTTAGGATTGCAACCCAGGAACATAGATTCAAGTTaGCCTGGATACACACTCTATAAGCAGCAGTTACAG | + |
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Preference number: 3 (lower is better) Translates to: ALGLQPRNIDSS*PGYTLYKQQLQ Trigger: CTGTAACTGCTGCTTATAGAGTGTGTATCCAGGGCAACTTGAATCTATGTTCCTGGGTTGCAATCCTAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR-3UTR CAA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACAAGCCAAGCTTTAGGATaGCAACCCAGGAACATAGAT | + |
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Preference number: 3 (lower is better) Translates to: TVDNRISYLLSDPFSIRTSQALG*QPRNID Trigger: ATCTATGTTCCTGGGTTGCAATCCTAAAGCTTGGCT...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR-3UTR CAA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACAGCTAAAACCAAGATCTaGATCTTTAACACTGACCTA | + |
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Preference number: 3 (lower is better) Translates to: TVDNRISYLLSDPFSIRTAKTKI*IFNTDL Trigger: TAGGTCAGTGTTAAAGATCAAGATCTTGGTTTTAGC...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| 3UTR GCA 72 bp | TATGCAAAAGACACTGTAGTAGGCACACAGCATCGGTaGTTAGTTATTGTTAACAACCCAATAATTATAATA | + |
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Preference number: 3 (lower is better) Translates to: YAKDTVVGTQHR*LVIVNNPIIII Trigger: TATTATAATTATTGGGTTGTTAACAATAACTAAGCACCGATGCTGTGTGCCTACTACAGTGTCTTTTGCATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR TCA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGGCGTCCCCAGGAGCGTaGGGAGCAGGACCTGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: IFLYQKRFASITADLADEASPGA*GAGPAR Trigger: GCGAGCAGGTCCTGCTCCTCACGCTCCTGGGGACGC...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR GCA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGGTGAGGAGCAGGACCTaGTCGCTGCGCTGCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: IFLYQKRFASITADLADEVRSRT*SLRCGC Trigger: GCATCCGCAGCGCAGCGAGCAGGTCCTGCTCCTCAC...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR GCA 90 bp | TTAAATACTATCAGGCACACAGTATGCAAAAGACACTGTAGTAGGCACACAGCAACCTGCTCGCTGCGCTaGGGATGCCTCTGCGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LNTIRHTVCKRHCSRHTATCSLR*GCLCGG Trigger: GCCTCCGCAGAGGCATCCGCAGCGCAGCGAGCAGGT...TGCTGTGTGCCTACTACAGTGTCTTTTGCATACTGTGTGCCTGATAGTATTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR GCA 90 bp | TTTAACACCAAAGATCTGGTGTCCCCTGCTGCAGTTACCAATGATTCTTATCTTCGCTGCGGATGCCTCTaGGGAGGCGCCATTACTGGC | + |
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Preference number: 4 (lower is better) Translates to: FNTKDLVSPAAVTNDSYLRCGCL*GGAITG Trigger: GCCAGTAATGGCGCCTCCGCAGAGGCATCCGCAGCG...AAGATAAGAATCATTGGTAACTGCAGCAGGGGACACCAGATCTTTGGTGTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGCCAGCTCCGGGTACTTaGGCCCATGGGCTTCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: IFLYQKRFASITADLADEPAPGT*AHGLRF Trigger: AAAGCGAAGCCCATGGGCCCAAGTACCCGGAGCTGG...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR TCA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACAATTTGGGCGACGCTTaGGCGGACAGGGTCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: HSPVSHLFLEICPVSRHYNLGDA*ADRVAA Trigger: GGCGGCGACCCTGTCCGCTCAAGCGTCGCCCAAATT...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR GCA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACTCGCTGCGCTGCGGATaGCTCTGCGGAGGCGCCATT | + |
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Preference number: 4 (lower is better) Translates to: HSPVSHLFLEICPVSRHYSLRCG*LCGGAI Trigger: AATGGCGCCTCCGCAGAGGCATCCGCAGCGCAGCGA...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR GCA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACAGCAGGACCTGCTCGCTaGGCTGCGGATGCCTCTGCG | + |
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Preference number: 4 (lower is better) Translates to: TVDNRISYLLSDPFSIRTAGPAR*AADASA Trigger: CGCAGAGGCATCCGCAGCGCAGCGAGCAGGTCCTGC...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGTCTGTCTCGAAGACCTaGCCCATCCCGGGCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: IFLYQKRFASITADLADESVSKT*PIPGFN Trigger: GTTGAAGCCCGGGATGGGCCAGGTCTTCGAGACAGA...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR TCA 90 bp | TTTAACACCAAAGATCTGGTGTCCCCTGCTGCAGTTACCAATGATTCTTATCTTCGTGTGCAGGCCCACTaGGAAAAGTCCTGGCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: FNTKDLVSPAAVTNDSYLRVQAH*EKSWLA Trigger: AGCGAGCCAGGACTTTTCTCAGTGGGCCTGCACACG...AAGATAAGAATCATTGGTAACTGCAGCAGGGGACACCAGATCTTTGGTGTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACTGCTCCGCCAACTCCTaGGGCTCCAGTCCCAGATCC | + |
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Preference number: 4 (lower is better) Translates to: HSPVSHLFLEICPVSRHYCSANS*GSSPRS Trigger: GGATCTGGGACTGGAGCCCCAGGAGTTGGCGGAGCA...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR GCA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGCTGCCAACACTGGTGTaGCTACTGGCAGGTTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: IFLYQKRFASITADLADELPTLV*LLAGFQ Trigger: CTGAAAACCTGCCAGTAGGCACACCAGTGTTGGCAG...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR GCA 90 bp | TTAAATACTATCAGGCACACAGTATGCAAAAGACACTGTAGTAGGCACACAGCAAGCCTCCCGAGTAGCTaGGATTACAGGCCCATGCCA | + |
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Preference number: 4 (lower is better) Translates to: LNTIRHTVCKRHCSRHTASLPSS*DYRPMP Trigger: TGGCATGGGCCTGTAATCGCAGCTACTCGGGAGGCT...TGCTGTGTGCCTACTACAGTGTCTTTTGCATACTGTGTGCCTGATAGTATTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR GCA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGGCTCACTGCAACCTCTaGCTCATGGGTTCAAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: IFLYQKRFASITADLADEAHCNL*LMGSSD Trigger: ATCGCTTGAACCCATGAGGCAGAGGTTGCAGTGAGC...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR GCA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACGTCGGTGGCAGTCACTaGCAACACTGGTGTGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: HSPVSHLFLEICPVSRHYVGGSH*QHWCAY Trigger: GTAGGCACACCAGTGTTGGCAGTGACTGCCACCGAC...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGCACTGGTGTGCCTACTaGCAGGTTTTCAGGAACACT | + |
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Preference number: 4 (lower is better) Translates to: IFLYQKRFASITADLADEHWCAY*QVFRNT Trigger: AGTGTTCCTGAAAACCTGCCAGTAGGCACACCAGTG...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGTTCTGTAGACAGAGGTaGTGTTCCTTTGTCCGTGGC | + |
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Preference number: 4 (lower is better) Translates to: IFLYQKRFASITADLADEFCRQR*CSFVRG Trigger: GCCACGGACAAAGGAACACCACCTCTGTCTACAGAA...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACGAGACTTGGGCGTTCTaGTCCACGTCAGGGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: HSPVSHLFLEICPVSRHYETWAF*STSGSS Trigger: ACTGGACCCTGACGTGGACCAGAACGCCCAAGTCTC...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | TTAAATACTATCAGGCACACAGTATGCAAAAGACACTGTAGTAGGCACACAGCAAGTCACTGCCAACACTaGTGTGCCTACTGGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LNTIRHTVCKRHCSRHTASHCQH*CAYWQV Trigger: AACCTGCCAGTAGGCACACCAGTGTTGGCAGTGACT...TGCTGTGTGCCTACTACAGTGTCTTTTGCATACTGTGTGCCTGATAGTATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR TCA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACAGGTGTCTTCTGCCAGTaGGTAGGAGACTTGGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: TVDNRISYLLSDPFSIRTGVFCQ*VGDLGV Trigger: AACGCCCAAGTCTCCTACTCACTGGCAGAAGACACC...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR TCA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACGCTGATGAGCCTGTCTaGTTAGTTGGGTTGCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: HSPVSHLFLEICPVSRHYADEPV*LVGLRE Trigger: TTCCCGCAACCCAACTAATCAGACAGGCTCATCAGC...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR TCA 90 bp | TTAAATACTATCAGGCACACAGTATGCAAAAGACACTGTAGTAGGCACACAGCAAACGATACCCTCACCTaGACAAGGGAGTCTTCCACT | + |
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Preference number: 4 (lower is better) Translates to: LNTIRHTVCKRHCSRHTANDTLT*TRESST Trigger: AGTGGAAGACTCCCTTGTTCAGGTGAGGGTATCGTT...TGCTGTGTGCCTACTACAGTGTCTTTTGCATACTGTGTGCCTGATAGTATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR GCA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGTCTCCCAGGCTAGGGTaGAGTGACACAATTATATCT | + |
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Preference number: 4 (lower is better) Translates to: IFLYQKRFASITADLADESPRLG*SDTIIS Trigger: AGATATAATTGTGTCACTGCACCCTAGCCTGGGAGA...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | TTAAATACTATCAGGCACACAGTATGCAAAAGACACTGTAGTAGGCACACAGCAACTGTTACCAGAATTTaGGCGACGCTTGAGCGGACA | + |
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Preference number: 4 (lower is better) Translates to: LNTIRHTVCKRHCSRHTATVTRI*ATLERT Trigger: TGTCCGCTCAAGCGTCGCCCAAATTCTGGTAACAGT...TGCTGTGTGCCTACTACAGTGTCTTTTGCATACTGTGTGCCTGATAGTATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | TTCTCCCATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGAGGAGACTTCTCGGGATaGAACAGGTTACCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: FSHSPVSHLFLEICPVSRGDFSG*NRLPGH Trigger: ATGGCCTGGTAACCTGTTCCATCCCGAGAAGTCTCC...TCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATGGGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGAGCAGCAGTTACAGGTaGATTTTTACTCCAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: IFLYQKRFASITADLADESSSYR*IFTPDW Trigger: CCAGTCTGGAGTAAAAATCCACCTGTAACTGCTGCT...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR TCA 90 bp | TTAAATACTATCAGGCACACAGTATGCAAAAGACACTGTAGTAGGCACACAGCAGCTTTGCACGTCCACTaGGAAGTGACTATTACCACT | + |
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Preference number: 4 (lower is better) Translates to: LNTIRHTVCKRHCSRHTAALHVH*EVTITT Trigger: AGTGGTAATAGTCACTTCTCAGTGGACGTGCAAAGC...TGCTGTGTGCCTACTACAGTGTCTTTTGCATACTGTGTGCCTGATAGTATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR TCA 90 bp | TTTAACACCAAAGATCTGGTGTCCCCTGCTGCAGTTACCAATGATTCTTATCTTCAGGCTAGGGTGCAGTaGCACAATTATATCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: FNTKDLVSPAAVTNDSYLQARVQ*HNYISL Trigger: CAGTGAGATATAATTGTGTCACTGCACCCTAGCCTG...AAGATAAGAATCATTGGTAACTGCAGCAGGGGACACCAGATCTTTGGTGTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACAAGCCTCCTGAAGAGGTaGGATTACAGGCGTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: TVDNRISYLLSDPFSIRTSLLKR*DYRREP Trigger: TGGTTCACGCCTGTAATCCCACCTCTTCAGGAGGCT...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACACTGGTCTCAAACTCCTaGTCTCAAGGGATCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: TVDNRISYLLSDPFSIRTLVSNS*SQGILL Trigger: CAGGAGGATCCCTTGAGACCAGGAGTTTGAGACCAG...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR TCA 90 bp | TTCTCCCATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACTGAGCTTAAATCCCTaGAGGGAGTTCATTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: FSHSPVSHLFLEICPVSRLSLNP*REFIPT Trigger: TGTGGGAATGAACTCCCTTCAGGGATTTAAGCTCAG...TCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATGGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR TCA 90 bp | TTCTCCCATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACCGTGGCTGTCACAGTaGTGTTGTACAAGAATACCT | + |
|
Preference number: 4 (lower is better) Translates to: FSHSPVSHLFLEICPVSRPWLSQ*CCTRIP Trigger: AGGTATTCTTGTACAACATCACTGTGACAGCCACGG...TCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATGGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR CCA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACCGGAGGCGCCATTACTaGCTTATTAGGAACTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSPVSHLFLEICPVSRHYRRRHY*LIRNFS Trigger: AGAGAAGTTCCTAATAAGCCAGTAATGGCGCCTCCG...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR CCA 90 bp | TTTAACACCAAAGATCTGGTGTCCCCTGCTGCAGTTACCAATGATTCTTATCTTTGGAAAACGAGAGGATaGAGCTGCGTTTTCGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FNTKDLVSPAAVTNDSYLWKTRG*SCVFEN Trigger: ATTCTCGAAAACGCAGCTCCATCCTCTCGTTTTCCA...AAGATAAGAATCATTGGTAACTGCAGCAGGGGACACCAGATCTTTGGTGTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR CCA 90 bp | TTAAATACTATCAGGCACACAGTATGCAAAAGACACTGTAGTAGGCACACAGCATTAACACCAAAGATCTaGTGTCCCCTGCTGCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LNTIRHTVCKRHCSRHTALTPKI*CPLLQL Trigger: TAACTGCAGCAGGGGACACCAGATCTTTGGTGTTAA...TGCTGTGTGCCTACTACAGTGTCTTTTGCATACTGTGTGCCTGATAGTATTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGAATTTTTACTCCAGACTaGGCAACAGAGGGGGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSHSPVSHLFLEICPVSRIFTPD*ATEGDP Trigger: AGGATCCCCCTCTGTTGCCCAGTCTGGAGTAAAAAT...TCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATGGGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR TCA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACACGTCCACTGAGAAGTaGCTATTACCACTGAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: HSPVSHLFLEICPVSRHYTSTEK*LLPLSL Trigger: TAAGCTCAGTGGTAATAGTCACTTCTCAGTGGACGT...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR CCA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACAGGCGATTACTGTTCCTaGAGGTGCACTTTCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVDNRISYLLSDPFSIRTGDYCS*RCTFSN Trigger: ATTGCTGAAAGTGCACCTCCAGGAACAGTAATCGCC...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGATCACCTGAAGTTGCCTaGGTTCTCCTTTCGTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSHSPVSHLFLEICPVSRSPEVA*VLLSFQ Trigger: TTGAAACGAAAGGAGAACCCAGGCAACTTCAGGTGA...TCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATGGGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR TCA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACTCTCGATCGAACACTTaGAAAAGGGCGATTACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HSPVSHLFLEICPVSRHYSRSNT*KRAITV Trigger: AACAGTAATCGCCCTTTTTCAAGTGTTCGATCGAGA...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR TCA 90 bp | TTTAACACCAAAGATCTGGTGTCCCCTGCTGCAGTTACCAATGATTCTTATCTTCTATTCGAACATCATTaGCAGTCAAAAACTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FNTKDLVSPAAVTNDSYLLFEHH*QSKTLL Trigger: CAGCAGAGTTTTTGACTGTCAATGATGTTCGAATAG...AAGATAAGAATCATTGGTAACTGCAGCAGGGGACACCAGATCTTTGGTGTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR GCA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACAACGAGAGGATGGAGCTaGGTTTTCGAGAATTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVDNRISYLLSDPFSIRTTRGWS*VFENFH Trigger: GTGAAAATTCTCGAAAACGCAGCTCCATCCTCTCGT...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGAGGCACACAGCATCGGTaGTTAGTTATTGTTAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSHSPVSHLFLEICPVSRGTQHR*LVIVNN Trigger: GTTGTTAACAATAACTAAGCACCGATGCTGTGTGCC...TCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATGGGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR GCA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACATCAGGCACACAGTATaGAAAAGACACTGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSPVSHLFLEICPVSRHYIRHTV*KRHCSR Trigger: CCTACTACAGTGTCTTTTGCATACTGTGTGCCTGAT...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR GCA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGGACAGTCAAAAACTCTaGTGTTTTCTGTTCATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IFLYQKRFASITADLADEDSQKL*CFLFMK Trigger: TTTCATGAACAGAAAACAGCAGAGTTTTTGACTGTC...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR CCA 90 bp | TTAAATACTATCAGGCACACAGTATGCAAAAGACACTGTAGTAGGCACACAGCATTTTTCCAATTCAAATaGGAGACTTCTCGGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNTIRHTVCKRHCSRHTAFFQFK*ETSRDG Trigger: TCCATCCCGAGAAGTCTCCCATTTGAATTGGAAAAA...TGCTGTGTGCCTACTACAGTGTCTTTTGCATACTGTGTGCCTGATAGTATTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR CCA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGCTTCCAACTCATGACTaGAGAAAAATCTTGACTATA | + |
|
Preference number: 4 (lower is better) Translates to: IFLYQKRFASITADLADELPTHD*RKILTI Trigger: TATAGTCAAGATTTTTCTCCAGTCATGAGTTGGAAG...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| 3UTR CAA 72 bp | AATATAAGTAGAGCTTATTTGAGCCAAGCTTTAGGATaGCAACCCAGGAACATAGATTCAAGTTGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NISRAYLSQALG*QPRNIDSSCPG Trigger: TCCAGGGCAACTTGAATCTATGTTCCTGGGTTGCAATCCTAAAGCTTGGCTCAAATAAGCTCTACTTATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR TCA 90 bp | TTTAACACCAAAGATCTGGTGTCCCCTGCTGCAGTTACCAATGATTCTTATCTTGCTGTTTTCTGTTCATaGAACAATGATTCTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FNTKDLVSPAAVTNDSYLAVFCS*NNDSVC Trigger: GCAAACAGAATCATTGTTTCATGAACAGAAAACAGC...AAGATAAGAATCATTGGTAACTGCAGCAGGGGACACCAGATCTTTGGTGTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR GCA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACAGAGGAAGAACAGATCTaGATCACTTTTGCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVDNRISYLLSDPFSIRTEEEQI*ITFALL Trigger: GAGAAGAGCAAAAGTGATGCAGATCTGTTCTTCCTC...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR TCA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACGAAAGATCTCTTGTATaGACGTCTGTCGTTTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSPVSHLFLEICPVSRHYERSLV*TSVVYS Trigger: ACTATAAACGACAGACGTTCATACAAGAGATCTTTC...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR GCA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACCATAACAAATTCAGATaGACAAGTGGCCAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HSPVSHLFLEICPVSRHYHNKFR*TSGQSI Trigger: AATGGATTGGCCACTTGTGCATCTGAATTTGTTATG...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGAATTCAGATGCACAAGTaGCCAATCCATTCTATAATA | + |
|
Preference number: 4 (lower is better) Translates to: FSHSPVSHLFLEICPVSRIQMHK*PIHSII Trigger: TATTATAGAATGGATTGGCCACTTGTGCATCTGAAT...TCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATGGGAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CCA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACATGTAACAACCACTTCTaGTACATTATCATTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: TVDNRISYLLSDPFSIRTCNNHF*YIIIDI Trigger: GATGTCAATGATAATGTACCAGAAGTGGTTGTTACA...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS GCA 90 bp | GTCCCCAGGAGCGTGAGGAGCAGGACCTGCTCGCTGCGCTGCGGATaGCTCTGCGGAGGCGCCATTACTGGCTTATTAGGAACTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPRSVRSRTCSLRCG*LCGGAITGLLGTSL Trigger: CAGAGAAGTTCCTAATAAGCCAGTAATGGCGCCTCCGCAGAGGCATCCGCAGCGCAGCGAGCAGGTCCTGCTCCTCACGCTCCTGGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517434.3 ENST00000610583.1 |
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| CDS GCA 90 bp | AGGAGCGTGAGGAGCAGGACCTGCTCGCTGCGCTGCGGATGCCTCTaGGGAGGCGCCATTACTGGCTTATTAGGAACTTCTCTGGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: RSVRSRTCSLRCGCL*GGAITGLLGTSLGL Trigger: TAATCCCAGAGAAGTTCCTAATAAGCCAGTAATGGCGCCTCCGCAGAGGCATCCGCAGCGCAGCGAGCAGGTCCTGCTCCTCACGCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517434.3 ENST00000610583.1 |
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| CDS CCA 90 bp | GACCTGCTCGCTGCGCTGCGGATGCCTCTGCGGAGGCGCCATTACTaGCTTATTAGGAACTTCTCTGGGATTAAGAAGAGGAAGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: DLLAALRMPLRRRHY*LIRNFSGIKKRKNR Trigger: TCTGTTCTTCCTCTTCTTAATCCCAGAGAAGTTCCTAATAAGCCAGTAATGGCGCCTCCGCAGAGGCATCCGCAGCGCAGCGAGCAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517434.3 ENST00000610583.1 |
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| CDS-3UTR CAA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACGAATTTGGGCGACGCTaGAGCGGACAGGGTCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HSPVSHLFLEICPVSRHYEFGRR*SGQGRR Trigger: GCGGCGACCCTGTCCGCTCAAGCGTCGCCCAAATTC...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS GCA 90 bp | TTCTCAGAAATAGCGGTGAAGGTCCTTCAACAAGCAGAGACCGGATaGGAAGCGTTTCAGGTCAGAATTTCTGCACAGCTTTCCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSEIAVKVLQQAETG*EAFQVRISAQLSCF Trigger: AAAGCAGGAAAGCTGTGCAGAAATTCTGACCTGAAACGCTTCGCATCCGGTCTCTGCTTGTTGAAGGACCTTCACCGCTATTTCTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517434.3 |
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| CDS GCA 90 bp | TCAACAAGCAGAGACCGGATGCGAAGCGTTTCAGGTCAGAATTTCTaGACAGCTTTCCTGCTTTCCCGTCTAATTTGCTTTGTTGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: STSRDRMRSVSGQNF*TAFLLSRLICFVVG Trigger: TCCAACAACAAAGCAAATTAGACGGGAAAGCAGGAAAGCTGTGCAGAAATTCTGACCTGAAACGCTTCGCATCCGGTCTCTGCTTGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517434.3 |
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| CDS-3UTR CAA 90 bp | TTTAACACCAAAGATCTGGTGTCCCCTGCTGCAGTTACCAATGATTCTTATCTTAGAGGTGGTGTTCCTTaGTCCGTGGCTGTCACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FNTKDLVSPAAVTNDSYLRGGVP*SVAVTV Trigger: CACTGTGACAGCCACGGACAAAGGAACACCACCTCT...AAGATAAGAATCATTGGTAACTGCAGCAGGGGACACCAGATCTTTGGTGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CAA 90 bp | TTAAATACTATCAGGCACACAGTATGCAAAAGACACTGTAGTAGGCACACAGCAGTCTCGATCGAACACTaGAAAAAGGGCGATTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LNTIRHTVCKRHCSRHTAVSIEH*KKGDYC Trigger: ACAGTAATCGCCCTTTTTCAAGTGTTCGATCGAGAC...TGCTGTGTGCCTACTACAGTGTCTTTTGCATACTGTGTGCCTGATAGTATTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CAA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGAAGGTGAAAGATCTCTaGTATGAACGTCTGTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IFLYQKRFASITADLADEKVKDL*YERLSF Trigger: AAACGACAGACGTTCATACAAGAGATCTTTCACCTT...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CAA 90 bp | ATCTTCCTGTACCAAAAGAGGTTCGCTTCTATAACAGCCGATCTAGCTGATGAGGGTCTAGAGCTGCATTaGTCACTAATCGATAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: IFLYQKRFASITADLADEGLELH*SLIDNN Trigger: ATTATTATCGATTAGTGACAAATGCAGCTCTAGACC...CTCATCAGCTAGATCGGCTGTTATAGAAGCGAACCTCTTTTGGTACAGGAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CAA 90 bp | TTCTCCCATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGAAGCCAAGCTTTAGGATaGCAACCCAGGAACATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FSHSPVSHLFLEICPVSRSQALG*QPRNID Trigger: ATCTATGTTCCTGGGTTGCAATCCTAAAGCTTGGCT...TCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATGGGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CAA 90 bp | TTAAATACTATCAGGCACACAGTATGCAAAAGACACTGTAGTAGGCACACAGCAAAGAATCGGGGTGTATaGTCATTAATGTCCACTATT | + |
|
Preference number: 5 (lower is better) Translates to: LNTIRHTVCKRHCSRHTAKNRGV*SLMSTI Trigger: AATAGTGGACATTAATGACAATACACCCCGATTCTT...TGCTGTGTGCCTACTACAGTGTCTTTTGCATACTGTGTGCCTGATAGTATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CAA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACAGAACATAGATTCAAGTaGCCCTGGATACACACTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TVDNRISYLLSDPFSIRTEHRFK*PWIHTL Trigger: TAGAGTGTGTATCCAGGGCAACTTGAATCTATGTTC...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CAA 90 bp | TTAAATACTATCAGGCACACAGTATGCAAAAGACACTGTAGTAGGCACACAGCAATAAGTAGAGCTTATTaGAGCCAAGCTTTAGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: LNTIRHTVCKRHCSRHTAISRAY*SQALGL Trigger: CAATCCTAAAGCTTGGCTCAAATAAGCTCTACTTAT...TGCTGTGTGCCTACTACAGTGTCTTTTGCATACTGTGTGCCTGATAGTATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
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| CDS-3UTR CAA 90 bp | CATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGACACTACGCCATCAACTTACTTTaGAAGACTGTCGATAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: HSPVSHLFLEICPVSRHYAINLL*KTVDNR Trigger: TCTGTTATCGACAGTCTTCAAAAGTAAGTTGATGGC...GTAGTGTCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR CAA 90 bp | TTCTCCCATTCACCAGTCAGTCATCTATTTTTAGAGATATGTCCTGTAAGCAGATCTATTCGAACATCATaGACAGTCAAAAACTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSHSPVSHLFLEICPVSRSIRTS*TVKNSA Trigger: AGCAGAGTTTTTGACTGTCAATGATGTTCGAATAGA...TCTGCTTACAGGACATATCTCTAAAAATAGATGACTGACTGGTGAATGGGAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS-3UTR CAA 90 bp | ACTGTCGATAACAGAATCTCCTATCTCCTTAGTGATCCATTTTCTATTCGAACAGTAAACATTGGAGTGTaGTCATTCACATCTAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: TVDNRISYLLSDPFSIRTVNIGV*SFTSRT Trigger: AGTTCTAGATGTGAATGACAACACTCCAATGTTTAC...TGTTCGAATAGAAAATGGATCACTAAGGAGATAGGAGATTCTGTTATCGACAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610583.1 |
||
| CDS GCA 72 bp | AGCGTGAGGAGCAGGACCTGCTCGCTGCGCTGCGGATaGCTCTGCGGAGGCGCCATTACTGGCTTATTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVRSRTCSLRCG*LCGGAITGLLG Trigger: TCCTAATAAGCCAGTAATGGCGCCTCCGCAGAGGCATCCGCAGCGCAGCGAGCAGGTCCTGCTCCTCACGCT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517434.3 ENST00000610583.1 |
||
| CDS GCA 72 bp | AGGAGCAGGACCTGCTCGCTGCGCTGCGGATGCCTCTaGGGAGGCGCCATTACTGGCTTATTAGGAACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSRTCSLRCGCL*GGAITGLLGTS Trigger: AGAAGTTCCTAATAAGCCAGTAATGGCGCCTCCGCAGAGGCATCCGCAGCGCAGCGAGCAGGTCCTGCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517434.3 ENST00000610583.1 |
||
| CDS CCA 72 bp | GCTGCGCTGCGGATGCCTCTGCGGAGGCGCCATTACTaGCTTATTAGGAACTTCTCTGGGATTAAGAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AALRMPLRRRHY*LIRNFSGIKKR Trigger: CCTCTTCTTAATCCCAGAGAAGTTCCTAATAAGCCAGTAATGGCGCCTCCGCAGAGGCATCCGCAGCGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517434.3 ENST00000610583.1 |
||
| CDS TCA 72 bp | GTACTTGGGCCCATGGGCTTCGCTTTGCACGTCCACTaGGAAGTGACTATTACCACTGAGCTTAAATCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLGPMGFALHVH*EVTITTELKSL Trigger: CAGGGATTTAAGCTCAGTGGTAATAGTCACTTCTCAGTGGACGTGCAAAGCGAAGCCCATGGGCCCAAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517434.3 ENST00000610583.1 |
||
| CDS CAA 72 bp | TACCAGGCCATTCAGGCCAGAGTCTCGATCGAACACTaGAAAAAGGGCGATTACTGTTCCTGGAGGTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: YQAIQARVSIEH*KKGDYCSWRCT Trigger: AGTGCACCTCCAGGAACAGTAATCGCCCTTTTTCAAGTGTTCGATCGAGACTCTGGCCTGAATGGCCTGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517434.3 ENST00000610583.1 |
||
| CDS GCA 72 bp | ATAGCGGTGAAGGTCCTTCAACAAGCAGAGACCGGATaGGAAGCGTTTCAGGTCAGAATTTCTGCACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: IAVKVLQQAETG*EAFQVRISAQL Trigger: AAGCTGTGCAGAAATTCTGACCTGAAACGCTTCGCATCCGGTCTCTGCTTGTTGAAGGACCTTCACCGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517434.3 |
||
| CDS CAA 90 bp | AACTTCTCTGGGATTAAGAAGAGGAAGAACAGATCTGCATCACTTTaGCTCTTCTCAGAAATAGCGGTGAAGGTCCTTCAACAAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: NFSGIKKRKNRSASL*LFSEIAVKVLQQAE Trigger: CTCTGCTTGTTGAAGGACCTTCACCGCTATTTCTGAGAAGAGCAAAAGTGATGCAGATCTGTTCTTCCTCTTCTTAATCCCAGAGAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517434.3 |
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| CDS CAA 72 bp | TTCACTTCCAATTCTTCCTTTAAGAATCGGGGTGTATaGTCATTAATGTCCACTATTTCCACTTCCACGGGA | + |
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Preference number: 6 (lower is better) Translates to: FTSNSSFKNRGV*SLMSTISTSTG Trigger: TCCCGTGGAAGTGGAAATAGTGGACATTAATGACAATACACCCCGATTCTTAAAGGAAGAATTGGAAGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517434.3 ENST00000610583.1 |
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| CDS CAA 90 bp | ATTGTTCTGCTTCCAGATGTAACAACCACTTCTGGTACATTATCATaGACATCCAAGATAGTTATTAAGACTTTCGCTCTGTCTCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: IVLLPDVTTTSGTLS*TSKIVIKTFALSRR Trigger: TCTTCGAGACAGAGCGAAAGTCTTAATAACTATCTTGGATGTCAATGATAATGTACCAGAAGTGGTTGTTACATCTGGAAGCAGAACAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517434.3 ENST00000610583.1 |
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| CDS CAA 72 bp | TGTACAAGAATACCTCTTCCCGGTCTAGAGCTGCATTaGTCACTAATCGATAATAATTGCCAACTGATTTTT | + |
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Preference number: 6 (lower is better) Translates to: CTRIPLPGLELH*SLIDNNCQLIF Trigger: AAAAATCAGTTGGCAATTATTATCGATTAGTGACAAATGCAGCTCTAGACCGGGAAGAGGTATTCTTGTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517434.3 ENST00000610583.1 |
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