Pregenerated sensors for PCDHB8 (Homo sapiens)
Ensembl gene IDs: ENSG00000120322Ensembl transcript IDs: ENST00000239444.4
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS TCA 90 bp | CTAAAGTTAGAGTTTTGTTCCATTTCTGGCCCAAAAGAATGGCCCTaGATATTAGGTAATACTGGTTTCAGGAGCTGGAACTCATTCGTC | + |
Preference number: 5 (lower is better) Translates to: LKLEFCSISGPKEWP*ILGNTGFRSWNSFV Trigger: GACGAATGAGTTCCAGCTCCTGAAACCAGTATTACCTAATATTCAGGGCCATTCTTTTGGGCCAGAAATGGAACAAAACTCTAACTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239444.4 |
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CDS TCA 72 bp | GAGTTTTGTTCCATTTCTGGCCCAAAAGAATGGCCCTaGATATTAGGTAATACTGGTTTCAGGAGCTGGAAC | + |
Preference number: 6 (lower is better) Translates to: EFCSISGPKEWP*ILGNTGFRSWN Trigger: GTTCCAGCTCCTGAAACCAGTATTACCTAATATTCAGGGCCATTCTTTTGGGCCAGAAATGGAACAAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239444.4 |