Pregenerated sensors for PCDHA7 (Homo sapiens)
Ensembl gene IDs: ENSG00000204963Ensembl transcript IDs: ENST00000356878.5, ENST00000525929.2
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GCAGAGAGTCCAACCTCTCACTGGCGGGGCTGGGAAGCCTCTCCTTaGCGGCGGAGGAGAAAGGAAACTTGGGTCTGCTTTTTAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: AESPTSHWRGWEASP*RRRRKETWVCFLGS Trigger: AGAACCTAAAAAGCAGACCCAAGTTTCCTTTCTCCTCCGCCGCAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525929.2 |
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| 3UTR CAA 90 bp | GTGCTTGCACACCCTCATGGAATATTGTCAGTATTCATTCCAAAATaGTTACTAGAACAAAACAGCTTTATCCATTCCCTTGCCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VLAHPHGILSVFIPK*LLEQNSFIHSLASR Trigger: TCTGCTGGCAAGGGAATGGATAAAGCTGTTTTGTTCTAGTAACAATTTTGGAATGAATACTGACAATATTCCATGAGGGTGTGCAAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525929.2 |
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| 3UTR CCA 72 bp | TCCCCGGAGCACAGGGCAGAGAGTCCAACCTCTCACTaGCGGGGCTGGGAAGCCTCTCCTTTGCGGCGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SPEHRAESPTSH*RGWEASPLRRR Trigger: CCTCCGCCGCAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTGCTCCGGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525929.2 |
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| 3UTR CCA 72 bp | CACAGGGCAGAGAGTCCAACCTCTCACTGGCGGGGCTaGGAAGCCTCTCCTTTGCGGCGGAGGAGAAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: HRAESPTSHWRG*EASPLRRRRKE Trigger: TTCCTTTCTCCTCCGCCGCAAAGGAGAGGCTTCCCAGCCCCGCCAGTGAGAGGTTGGACTCTCTGCCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525929.2 |
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| 3UTR CCA 72 bp | GGCACTCGCATACCCGCGGTAGCCACACATACCCAGTaGCCACAAACTCCCAAGCTGCTCAATCTCAAAACT | + |
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Preference number: 3 (lower is better) Translates to: GTRIPAVATHTQ*PQTPKLLNLKT Trigger: AGTTTTGAGATTGAGCAGCTTGGGAGTTTGTGGCCACTGGGTATGTGTGGCTACCGCGGGTATGCGAGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525929.2 |
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| 3UTR CCA 72 bp | CCAATTAGTCTAAGCTGGCTCGTCTCAGCCAATATCTaGCACTCGCATACCCGCGGTAGCCACACATACCCA | + |
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Preference number: 3 (lower is better) Translates to: PISLSWLVSANI*HSHTRGSHTYP Trigger: TGGGTATGTGTGGCTACCGCGGGTATGCGAGTGCCAGATATTGGCTGAGACGAGCCAGCTTAGACTAATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525929.2 |
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| 3UTR CCA 72 bp | GAAGCCTCTCCTTTGCGGCGGAGGAGAAAGGAAACTTaGGTCTGCTTTTTAGGTTCTGAAAACAAGCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: EASPLRRRRKET*VCFLGSENKPE Trigger: CTCTGGCTTGTTTTCAGAACCTAAAAAGCAGACCCAAGTTTCCTTTCTCCTCCGCCGCAAAGGAGAGGCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525929.2 |
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| 3UTR CCA 72 bp | TGTTTTCTTGCCTTCCTTGTACCAATTAGTCTAAGCTaGCTCGTCTCAGCCAATATCTGGCACTCGCATACC | + |
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Preference number: 3 (lower is better) Translates to: CFLAFLVPISLS*LVSANIWHSHT Trigger: GGTATGCGAGTGCCAGATATTGGCTGAGACGAGCCAGCTTAGACTAATTGGTACAAGGAAGGCAAGAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525929.2 |
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| CDS-3UTR GCA 90 bp | AAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATGGAGATCTCTGGGCCTGCAATaGCCAACGATGCCCGCGACG | + |
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Preference number: 4 (lower is better) Translates to: KKGESIAPVSKVLLQKWRSLGLQ*PTMPAT Trigger: CGTCGCGGGCATCGTTGGGCATTGCAGGCCCAGAGA...TCTCCATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR GCA 90 bp | CCAGTTAGCAAAGTCCTCCTCCAAAAATGGAGAGTAGCCAACATAAACCATAGACTCGGTCTCTGGGCCTaGAATGCCCAACGATGCCCG | + |
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Preference number: 4 (lower is better) Translates to: PVSKVLLQKWRVANINHRLGLWA*NAQRCP Trigger: CGGGCATCGTTGGGCATTGCAGGCCCAGAGACCGAG...TCTATGGTTTATGTTGGCTACTCTCCATTTTTGGAGGAGGACTTTGCTAACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR TCA 90 bp | GTTAGCAAAGTCCTCCTCCAAAAATGGAGAGTAGCCAACATAAACCATAGATTTCTCAGAGGACGGCGCTaGGCACCGCAACGCCGTGTA | + |
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Preference number: 4 (lower is better) Translates to: VSKVLLQKWRVANINHRFLRGRR*APQRRV Trigger: TACACGGCGTTGCGGTGCTCAGCGCCGTCCTCTGAG...AAATCTATGGTTTATGTTGGCTACTCTCCATTTTTGGAGGAGGACTTTGCTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR GCA 90 bp | AGAAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATGGAGATCCCCACGGAATTTaGACACCGCCCGGAACAGGC | + |
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Preference number: 4 (lower is better) Translates to: RRKVNPLLQLAKSSSKNGDPHGI*TPPGTG Trigger: GCCTGTTCCGGGCGGTGTGCAAATTCCGTGGGGATC...TCCATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR TCA 90 bp | AAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATGGAGAGTAGAGGATGGACCCTaGGGAAGGCTGGGACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: KKGESIAPVSKVLLQKWRVEDGP*GRLGLK Trigger: CTTCAGTCCCAGCCTTCCTCAGGGTCCATCCTCTAC...TCTCCATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR GCA 90 bp | TATAGAAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATTGCAATGCCCAACGATaGCCGCGACGACGCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: YRRKVNPLLQLAKSSSKNCNAQR*PRRRLW Trigger: CCAAAGGCGTCGTCGCGGGCATCGTTGGGCATTGCA...ATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR CCA 90 bp | TATAGAAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATAGCGAGGGCTCCCCGTaGTCCTTCACAAGCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: YRRKVNPLLQLAKSSSKNSEGSP*SFTSTR Trigger: TCTGGTGCTTGTGAAGGACCACGGGGAGCCCTCGCT...ATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTTCTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR CCA 90 bp | GTTAGCAAAGTCCTCCTCCAAAAATGGAGAGTAGCCAACATAAACCATAGATTTCACCAGCTCGGTCTCTaGGCCTGCAATGCCCAACGA | + |
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Preference number: 4 (lower is better) Translates to: VSKVLLQKWRVANINHRFHQLGL*ACNAQR Trigger: TCGTTGGGCATTGCAGGCCCAGAGACCGAGCTGGTG...AAATCTATGGTTTATGTTGGCTACTCTCCATTTTTGGAGGAGGACTTTGCTAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR GCA 90 bp | TATAGAAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATCTTTACCAAACTACATaGGCCCTCAGAGGACGGCGC | + |
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Preference number: 4 (lower is better) Translates to: YRRKVNPLLQLAKSSSKNLYQTT*ALRGRR Trigger: GCGCCGTCCTCTGAGGGCGCATGTAGTTTGGTAAAG...ATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR CCA 90 bp | GTTAGCAAAGTCCTCCTCCAAAAATGGAGAGTAGCCAACATAAACCATAGATTTTGGTTGGGCGTCCTCTaGAATAGGGAGAGACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: VSKVLLQKWRVANINHRFWLGVL*NRERQG Trigger: TCCCTGTCTCTCCCTATTCCAGAGGACGCCCAACCA...AAATCTATGGTTTATGTTGGCTACTCTCCATTTTTGGAGGAGGACTTTGCTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR CCA 90 bp | TATAGAAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATATGACGGTACCTGGTTaGGCGTCCTCTGGAATAGGG | + |
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Preference number: 4 (lower is better) Translates to: YRRKVNPLLQLAKSSSKNMTVPG*ASSGIG Trigger: CCCTATTCCAGAGGACGCCCAACCAGGTACCGTCAT...ATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTTCTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR TCA 90 bp | GTTAGCAAAGTCCTCCTCCAAAAATGGAGAGTAGCCAACATAAACCATAGATTTGGAGAGACAGGGAAGTaGGAGTCAACTGTGGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: VSKVLLQKWRVANINHRFGETGK*ESTVEH Trigger: ATGCTCCACAGTTGACTCTCACTTCCCTGTCTCTCC...AAATCTATGGTTTATGTTGGCTACTCTCCATTTTTGGAGGAGGACTTTGCTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR CCA 90 bp | TATAGAAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATTGTGATGACGGTACCTaGTTGGGCGTCCTCTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: YRRKVNPLLQLAKSSSKNCDDGT*LGVLWN Trigger: ATTCCAGAGGACGCCCAACCAGGTACCGTCATCACA...ATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTTCTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR TCA 90 bp | TATAGAAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATTGTGCATCCAAAGAGTaGAAGAGAGTGGAGCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: YRRKVNPLLQLAKSSSKNCASKE*KRVERL Trigger: AAGACGCTCCACTCTCTTTCACTCTTTGGATGCACA...ATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTTCTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR CCA 90 bp | CCAGTTAGCAAAGTCCTCCTCCAAAAATGGAGAGTAGCCAACATAAACCATAGATTCAATCTCGATGTGTaGCCATTGTTGTGCATCCAA | + |
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Preference number: 4 (lower is better) Translates to: PVSKVLLQKWRVANINHRFNLDV*PLLCIQ Trigger: TTGGATGCACAACAATGGCCACACATCGAGATTGAA...TCTATGGTTTATGTTGGCTACTCTCCATTTTTGGAGGAGGACTTTGCTAACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR CCA 90 bp | GTTAGCAAAGTCCTCCTCCAAAAATGGAGAGTAGCCAACATAAACCATAGATTTTGGAGCACACCAGAGTaGGCTTTACCAAACTACATG | + |
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Preference number: 4 (lower is better) Translates to: VSKVLLQKWRVANINHRFWSTPE*ALPNYM Trigger: CATGTAGTTTGGTAAAGCCCACTCTGGTGTGCTCCA...AAATCTATGGTTTATGTTGGCTACTCTCCATTTTTGGAGGAGGACTTTGCTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR CCA 90 bp | AAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATGGAGAGTCCTCCTCCAAAAATaGAGAGTAGCCAACATAAAC | + |
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Preference number: 4 (lower is better) Translates to: KKGESIAPVSKVLLQKWRVLLQK*RVANIN Trigger: GTTTATGTTGGCTACTCTCCATTTTTGGAGGAGGAC...TCTCCATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR CAA 90 bp | AAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATGGAGAAGATCCCCACGGAATTaGCACACCGCCCGGAACAGG | + |
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Preference number: 5 (lower is better) Translates to: KKGESIAPVSKVLLQKWRRSPRN*HTARNR Trigger: CCTGTTCCGGGCGGTGTGCAAATTCCGTGGGGATCT...TCTCCATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR CAA 90 bp | AAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATGGAGAGATGACGGTACCTGGTaGGGCGTCCTCTGGAATAGG | + |
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Preference number: 5 (lower is better) Translates to: KKGESIAPVSKVLLQKWRDDGTW*GVLWNR Trigger: CCTATTCCAGAGGACGCCCAACCAGGTACCGTCATC...TCTCCATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR CAA 90 bp | AGAAGAAAGGTGAATCCATTGCTCCAGTTAGCAAAGTCCTCCTCCAAAAATGGACAGGTAACCTGTCCGTaGACTCCAAAATCTCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: RRKVNPLLQLAKSSSKNGQVTCP*TPKSRS Trigger: TGACCGAGATTTTGGAGTCAACGGACAGGTTACCTG...TCCATTTTTGGAGGAGGACTTTGCTAACTGGAGCAATGGATTCACCTTTCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS-3UTR CAA 90 bp | CCAGTTAGCAAAGTCCTCCTCCAAAAATGGAGAGTAGCCAACATAAACCATAGAAGAAAGGTGAATCCATaGCTCCAGTTAGCAAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: PVSKVLLQKWRVANINHRRKVNP*LQLAKS Trigger: GGACTTTGCTAACTGGAGCAATGGATTCACCTTTCT...TCTATGGTTTATGTTGGCTACTCTCCATTTTTGGAGGAGGACTTTGCTAACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000356878.5 |
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| CDS CAA 72 bp | TGGGTCGTATCCATTCGGGCACACCATTTCAAATTATaGGCTTGTTTTTCTAGTCAGCAAAACTTGCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: WVVSIRAHHFKL*ACFSSQQNLPS Trigger: CGAAGGCAAGTTTTGCTGACTAGAAAAACAAGCCAATAATTTGAAATGGTGTGCCCGAATGGATACGACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000356878.5 ENST00000525929.2 |
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