Pregenerated sensors for PCBD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000166228Ensembl transcript IDs: ENST00000299299.4, ENST00000493228.1, ENST00000493961.5
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATCCCACAGCAAGGACTCAGCCCTCAACGGCGGCGGCTGGGTCTTaGGAGGGGAGTGGTGGGAGGGTAAGGGCTCCTCAGCTCCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: HPTARTQPSTAAAGS*EGSGGRVRAPQLPP Trigger: GGGAGGGAGCTGAGGAGCCCTTACCCTCCCACCACTCCCCTCCCAAGACCCAGCCGCCGCCGTTGAGGGCTGAGTCCTTGCTGTGGGATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR CCA 90 bp | GTGGTGCAGGGAAAAGGTCTAAATTCCTGGTGTTGGTGGGGACACTaGCACATCCCACAGCAAGGACTCAGCCCTCAACGGCGGCGGCTG | + |
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Preference number: 1 (lower is better) Translates to: VVQGKGLNSWCWWGH*HIPQQGLSPQRRRL Trigger: CAGCCGCCGCCGTTGAGGGCTGAGTCCTTGCTGTGGGATGTGCCAGTGTCCCCACCAACACCAGGAATTTAGACCTTTTCCCTGCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR CCA 90 bp | ATGAAGAGAGTGGTGCAGGGAAAAGGTCTAAATTCCTGGTGTTGGTaGGGACACTGGCACATCCCACAGCAAGGACTCAGCCCTCAACGG | + |
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Preference number: 1 (lower is better) Translates to: MKRVVQGKGLNSWCW*GHWHIPQQGLSPQR Trigger: CCGTTGAGGGCTGAGTCCTTGCTGTGGGATGTGCCAGTGTCCCCACCAACACCAGGAATTTAGACCTTTTCCCTGCACCACTCTCTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR CCA 90 bp | AGGATGAAGAGAGTGGTGCAGGGAAAAGGTCTAAATTCCTGGTGTTaGTGGGGACACTGGCACATCCCACAGCAAGGACTCAGCCCTCAA | + |
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Preference number: 1 (lower is better) Translates to: RMKRVVQGKGLNSWC*WGHWHIPQQGLSPQ Trigger: TTGAGGGCTGAGTCCTTGCTGTGGGATGTGCCAGTGTCCCCACCAACACCAGGAATTTAGACCTTTTCCCTGCACCACTCTCTTCATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR-3UTR CCA 90 bp | AGACGGCCTGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAAGAAAGGGGGCGGCGGCTGGGTCTTaGGAGGGGAGTGGTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: RRPGKKIIIVAGKLQRKGAAAGS*EGSGGR Trigger: CCTCCCACCACTCCCCTCCCAAGACCCAGCCGCCGC...CCCCTTTCTTTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCAGGCCGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR-3UTR CCA 90 bp | CATGTGTTTCTATTACATAGTGTGGGGTTTAGGGTCCTGGTTTCTAAGACAAGACTCAACGGCGGCGGCTaGGTCTTGGGAGGGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: HVFLLHSVGFRVLVSKTRLNGGG*VLGGEW Trigger: CCACTCCCCTCCCAAGACCCAGCCGCCGCCGTTGAG...TCTTGTCTTAGAAACCAGGACCCTAAACCCCACACTATGTAATAGAAACACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR-3UTR CCA 90 bp | TGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAAGAAAGGGGAGAGTTTACCTCAGCTCCCTCCCTaGACTCCCAGTTCAGTCACC | + |
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Preference number: 2 (lower is better) Translates to: WQENHYCCWEVAKKGESLPQLPP*TPSSVT Trigger: GGTGACTGAACTGGGAGTCCAGGGAGGGAGCTGAGG...TAAACTCTCCCCTTTCTTTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR-3UTR CCA 90 bp | AGACGGCCTGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAAGAAAGGGGCTAAATTCCTGGTGTTaGTGGGGACACTGGCACATC | + |
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Preference number: 2 (lower is better) Translates to: RRPGKKIIIVAGKLQRKGLNSWC*WGHWHI Trigger: GATGTGCCAGTGTCCCCACCAACACCAGGAATTTAG...CCCCTTTCTTTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCAGGCCGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR-3UTR CCA 90 bp | AGTGTGGGGTTTAGGGTCCTGGTTTCTAAGACAAGACTTTATTTCACCCTGTATAATTCCTGGTGTTGGTaGGGACACTGGCACATCCCA | + |
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Preference number: 2 (lower is better) Translates to: SVGFRVLVSKTRLYFTLYNSWCW*GHWHIP Trigger: TGGGATGTGCCAGTGTCCCCACCAACACCAGGAATT...ATACAGGGTGAAATAAAGTCTTGTCTTAGAAACCAGGACCCTAAACCCCACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTAAGACAAGACTTTATTTCACCCTGTATCACAGCTTCCTGGGAAATGAATGTTGGTGGGGACACTaGCACATCCCACAGCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: VSKTRLYFTLYHSFLGNECWWGH*HIPQQG Trigger: TCCTTGCTGTGGGATGTGCCAGTGTCCCCACCAACA...TTCATTTCCCAGGAAGCTGTGATACAGGGTGAAATAAAGTCTTGTCTTAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR-3UTR CCA 90 bp | TTTCTAAGACAAGACTTTATTTCACCCTGTATCACAGCTTCCTGGGAAATGAATAAAGGTCTAAATTCCTaGTGTTGGTGGGGACACTGG | + |
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Preference number: 2 (lower is better) Translates to: FLRQDFISPCITASWEMNKGLNS*CWWGHW Trigger: CCAGTGTCCCCACCAACACCAGGAATTTAGACCTTT...ATTCATTTCCCAGGAAGCTGTGATACAGGGTGAAATAAAGTCTTGTCTTAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR-3UTR CCA 90 bp | CACATGTGTTTCTATTACATAGTGTGGGGTTTAGGGTCCTGGTTTCTAAGACAAGAGCAAGAGACGGCCTaGCAAGAAAATCATTATTGT | + |
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Preference number: 2 (lower is better) Translates to: HMCFYYIVWGLGSWFLRQEQETA*QENHYC Trigger: ACAATAATGATTTTCTTGCCAGGCCGTCTCTTGCTC...TTGTCTTAGAAACCAGGACCCTAAACCCCACACTATGTAATAGAAACACATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTAAGACAAGACTTTATTTCACCCTGTATCACAGCTTCCTGGGAAATGAAAATCATTATTGTTGCTaGGAAGTTGCAAAGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VSKTRLYFTLYHSFLGNENHYCC*EVAKKG Trigger: CCCTTTCTTTGCAACTTCCCAGCAACAATAATGATT...TTCATTTCCCAGGAAGCTGTGATACAGGGTGAAATAAAGTCTTGTCTTAGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR CCA 72 bp | GCAAGGACTCAGCCCTCAACGGCGGCGGCTGGGTCTTaGGAGGGGAGTGGTGGGAGGGTAAGGGCTCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: ARTQPSTAAAGS*EGSGGRVRAPQ Trigger: CTGAGGAGCCCTTACCCTCCCACCACTCCCCTCCCAAGACCCAGCCGCCGCCGTTGAGGGCTGAGTCCTTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR CCA 72 bp | GTGGTGCAGGGAAAAGGTCTAAATTCCTGGTGTTGGTaGGGACACTGGCACATCCCACAGCAAGGACTCAGC | + |
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Preference number: 3 (lower is better) Translates to: VVQGKGLNSWCW*GHWHIPQQGLS Trigger: GCTGAGTCCTTGCTGTGGGATGTGCCAGTGTCCCCACCAACACCAGGAATTTAGACCTTTTCCCTGCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR CCA 72 bp | AGAGTGGTGCAGGGAAAAGGTCTAAATTCCTGGTGTTaGTGGGGACACTGGCACATCCCACAGCAAGGACTC | + |
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Preference number: 3 (lower is better) Translates to: RVVQGKGLNSWC*WGHWHIPQQGL Trigger: GAGTCCTTGCTGTGGGATGTGCCAGTGTCCCCACCAACACCAGGAATTTAGACCTTTTCCCTGCACCACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR TCA 72 bp | ACTTTATTTCACCCTGTATCACAGCTTCCTGGGAAATaGATTAGGGAGCAAGAGACGGCCTGGCAAGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: TLFHPVSQLPGK*IREQETAWQEN Trigger: ATTTTCTTGCCAGGCCGTCTCTTGCTCCCTAATTCATTTCCCAGGAAGCTGTGATACAGGGTGAAATAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR-3UTR CAA 90 bp | TGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAAGAAAGGGGAGAGTTTATCTAAATTCCTGGTGTaGGTGGGGACACTGGCACAT | + |
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Preference number: 3 (lower is better) Translates to: WQENHYCCWEVAKKGESLSKFLV*VGTLAH Trigger: ATGTGCCAGTGTCCCCACCAACACCAGGAATTTAGA...TAAACTCTCCCCTTTCTTTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| 3UTR-3UTR CAA 90 bp | AGTGTGGGGTTTAGGGTCCTGGTTTCTAAGACAAGACTTTATTTCACCCTGTATGCAAGAAAATCATTATaGTTGCTGGGAAGTTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: SVGFRVLVSKTRLYFTLYARKSL*LLGSCK Trigger: TTTGCAACTTCCCAGCAACAATAATGATTTTCTTGC...ATACAGGGTGAAATAAAGTCTTGTCTTAGAAACCAGGACCCTAAACCCCACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | CCCACAGCAAGGACTCAGCCCTCAACGGCGGCGGCTGGGTCTTGGGAGGGGAGTGTGCTTTGCCAGCCATaGCGCGGGCGGCAGCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: PTARTQPSTAAAGSWEGSVLCQP*RGRQQV Trigger: CACCTGCTGCCGCCCGCGCCATGGCTGGCAAAGCAC...ACTCCCCTCCCAAGACCCAGCCGCCGCCGTTGAGGGCTGAGTCCTTGCTGTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR GCA 90 bp | GACTCAGCCCTCAACGGCGGCGGCTGGGTCTTGGGAGGGGAGTGGTGGGAGGGTAGCGCTCAGCCTGTGTaGTTTGCCAGCCATGGCGCG | + |
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Preference number: 4 (lower is better) Translates to: DSALNGGGWVLGGEWWEGSAQPV*FASHGA Trigger: CGCGCCATGGCTGGCAAAGCACACAGGCTGAGCGCT...ACCCTCCCACCACTCCCCTCCCAAGACCCAGCCGCCGCCGTTGAGGGCTGAGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | ACAGCAAGGACTCAGCCCTCAACGGCGGCGGCTGGGTCTTGGGAGGGGAGTGGTAGGCCGGCACACTCATaGGTGCTCAGCGTGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: TARTQPSTAAAGSWEGSGRPAHS*VLSVMW Trigger: CCACATCACGCTGAGCACCCATGAGTGTGCCGGCCT...ACCACTCCCCTCCCAAGACCCAGCCGCCGCCGTTGAGGGCTGAGTCCTTGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | CCCACAGCAAGGACTCAGCCCTCAACGGCGGCGGCTGGGTCTTGGGAGGGGAGTAAAGGTCTAAATTCCTaGTGTTGGTGGGGACACTGG | + |
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Preference number: 4 (lower is better) Translates to: PTARTQPSTAAAGSWEGSKGLNS*CWWGHW Trigger: CCAGTGTCCCCACCAACACCAGGAATTTAGACCTTT...ACTCCCCTCCCAAGACCCAGCCGCCGCCGTTGAGGGCTGAGTCCTTGCTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | CAGCAAGGACTCAGCCCTCAACGGCGGCGGCTGGGTCTTGGGAGGGGAGTGGTGTTAAACCATTCAGGATaGTGGTCCAGTTTCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QQGLSPQRRRLGLGRGVVLNHSG*WSSFSA Trigger: GGCTGAGAAACTGGACCACCATCCTGAATGGTTTAA...CACCACTCCCCTCCCAAGACCCAGCCGCCGCCGTTGAGGGCTGAGTCCTTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR TCA 90 bp | ACTCCCAGTTCAGTCACCCCTTCCCCCGGAAGAATTCAAAGAGGAAGGGCAGGGACAGAGCCCCCAGGATaGAGAGAGTGGTGCAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TPSSVTPSPGRIQRGRAGTEPPG*REWCRE Trigger: TTCCCTGCACCACTCTCTTCATCCTGGGGGCTCTGT...CCCTGCCCTTCCTCTTTGAATTCTTCCGGGGGAAGGGGTGACTGAACTGGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR GCA 90 bp | GAAGAGAGTGGTGCAGGGAAAAGGTCTAAATTCCTGGTGTTGGTGGGGACACTGTCAGCCTGTGTGCTTTaGCAGCCATGGCGCGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: EESGAGKRSKFLVLVGTLSACVL*QPWRGR Trigger: CCGCCCGCGCCATGGCTGGCAAAGCACACAGGCTGA...CAGTGTCCCCACCAACACCAGGAATTTAGACCTTTTCCCTGCACCACTCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | ACGGCCTGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAAGAAAGGGGAGCTCAACGGCGGCGGCTaGGTCTTGGGAGGGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TAWQENHYCCWEVAKKGELNGGG*VLGGEW Trigger: CCACTCCCCTCCCAAGACCCAGCCGCCGCCGTTGAG...CTCCCCTTTCTTTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCAGGCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | GGGAGCAAGAGACGGCCTGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAGTCTTGGGAGGGGAGTaGTGGGAGGGTAAGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GSKRRPGKKIIIVAGKLQVLGGE*WEGKGS Trigger: GGAGCCCTTACCCTCCCACCACTCCCCTCCCAAGAC...TTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCAGGCCGTCTCTTGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | GGGAGCAAGAGACGGCCTGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAACCTCAGCTCCCTCCCTaGACTCCCAGTTCAGTCACC | + |
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Preference number: 4 (lower is better) Translates to: GSKRRPGKKIIIVAGKLQPQLPP*TPSSVT Trigger: GGTGACTGAACTGGGAGTCCAGGGAGGGAGCTGAGG...TTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCAGGCCGTCTCTTGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | GGGAGCAAGAGACGGCCTGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAATTGGGAGGGGAGTGGTaGGAGGGTAAGGGCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GSKRRPGKKIIIVAGKLQLGGEW*EGKGSS Trigger: TGAGGAGCCCTTACCCTCCCACCACTCCCCTCCCAA...TTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCAGGCCGTCTCTTGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR GCA 90 bp | ACTCCCAGTTCAGTCACCCCTTCCCCCGGAAGAATTCAAAGAGGAAGGGCAGGGCTATGTCATGGACACTaGTACTTGTTCGATGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: TPSSVTPSPGRIQRGRAGLCHGH*YLFDEA Trigger: AGCTTCATCGAACAAGTAGCAGTGTCCATGACATAG...CCCTGCCCTTCCTCTTTGAATTCTTCCGGGGGAAGGGGTGACTGAACTGGGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | GTCCTGGTTTCTAAGACAAGACTTTATTTCACCCTGTATCACAGCTTCCTGGGATGTTGGTGGGGACACTaGCACATCCCACAGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: VLVSKTRLYFTLYHSFLGCWWGH*HIPQQG Trigger: TCCTTGCTGTGGGATGTGCCAGTGTCCCCACCAACA...TCCCAGGAAGCTGTGATACAGGGTGAAATAAAGTCTTGTCTTAGAAACCAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR TCA 90 bp | AGACGGCCTGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAAGAAAGGGGCAGCTTCCTGGGAAATaGATTAGGGAGCAAGAGACG | + |
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Preference number: 4 (lower is better) Translates to: RRPGKKIIIVAGKLQRKGQLPGK*IREQET Trigger: CGTCTCTTGCTCCCTAATTCATTTCCCAGGAAGCTG...CCCCTTTCTTTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCAGGCCGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | GTCCTGGTTTCTAAGACAAGACTTTATTTCACCCTGTATCACAGCTTCCTGGGAAATTCCTGGTGTTGGTaGGGACACTGGCACATCCCA | + |
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Preference number: 4 (lower is better) Translates to: VLVSKTRLYFTLYHSFLGNSWCW*GHWHIP Trigger: TGGGATGTGCCAGTGTCCCCACCAACACCAGGAATT...TCCCAGGAAGCTGTGATACAGGGTGAAATAAAGTCTTGTCTTAGAAACCAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR TCA 90 bp | CTGGGAAGTTGCAAAGAAAGGGGAGAGTTTATTCAAATTAGTGTAACAGAGCCCGTTTATGTCCCGTTCTaGAAGGCCGGCACACTCATG | + |
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Preference number: 4 (lower is better) Translates to: LGSCKERGEFIQISVTEPVYVPF*KAGTLM Trigger: CATGAGTGTGCCGGCCTTTCAGAACGGGACATAAAC...GGGCTCTGTTACACTAATTTGAATAAACTCTCCCCTTTCTTTGCAACTTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | TTTCTAAGACAAGACTTTATTTCACCCTGTATCACAGCTTCCTGGGAAATGAATCACAGCCCTCAGGTTTaGCAGCAGCTGGTCCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FLRQDFISPCITASWEMNHSPQV*QQLVPL Trigger: GAGAGGGACCAGCTGCTGCCAAACCTGAGGGCTGTG...ATTCATTTCCCAGGAAGCTGTGATACAGGGTGAAATAAAGTCTTGTCTTAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR TCA 90 bp | CATGTGTTTCTATTACATAGTGTGGGGTTTAGGGTCCTGGTTTCTAAGACAAGACATGGGTGCTCAGCGTaGTGTGGACCTTGTTGTACA | + |
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Preference number: 4 (lower is better) Translates to: HVFLLHSVGFRVLVSKTRHGCSA*CGPCCT Trigger: TGTACAACAAGGTCCACATCACGCTGAGCACCCATG...TCTTGTCTTAGAAACCAGGACCCTAAACCCCACACTATGTAATAGAAACACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR TCA 90 bp | GTCCTGGTTTCTAAGACAAGACTTTATTTCACCCTGTATCACAGCTTCCTGGGACTGCTACTTGTTCGATaGAGCTGGCCAGGTTTATGT | + |
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Preference number: 4 (lower is better) Translates to: VLVSKTRLYFTLYHSFLGLLLVR*SWPGLC Trigger: ACATAAACCTGGCCAGCTTCATCGAACAAGTAGCAG...TCCCAGGAAGCTGTGATACAGGGTGAAATAAAGTCTTGTCTTAGAAACCAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR GCA 90 bp | CACATGTGTTTCTATTACATAGTGTGGGGTTTAGGGTCCTGGTTTCTAAGACAATCCAGTTTCTCAGCCTaGAGGGCCACTCTTGTCATG | + |
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Preference number: 4 (lower is better) Translates to: HMCFYYIVWGLGSWFLRQSSFSA*RATLVM Trigger: CATGACAAGAGTGGCCCTGCAGGCTGAGAAACTGGA...TTGTCTTAGAAACCAGGACCCTAAACCCCACACTATGTAATAGAAACACATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | ACGGCCTGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAAGAAAGGGGAGTGGGGTTTAGGGTCCTaGTTTCTAAGACAAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: TAWQENHYCCWEVAKKGEWGLGS*FLRQDF Trigger: AAAGTCTTGTCTTAGAAACCAGGACCCTAAACCCCA...CTCCCCTTTCTTTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCAGGCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | GTTTCTAAGACAAGACTTTATTTCACCCTGTATCACAGCTTCCTGGGAAATGAACTAAATTCCTGGTGTTaGTGGGGACACTGGCACATC | + |
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Preference number: 4 (lower is better) Translates to: VSKTRLYFTLYHSFLGNELNSWC*WGHWHI Trigger: GATGTGCCAGTGTCCCCACCAACACCAGGAATTTAG...TTCATTTCCCAGGAAGCTGTGATACAGGGTGAAATAAAGTCTTGTCTTAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | CTATTACATAGTGTGGGGTTTAGGGTCCTGGTTTCTAAGACAAGACTTTATTTCGTGCTCAGCGTGATGTaGACCTTGTTGTACACGTTA | + |
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Preference number: 4 (lower is better) Translates to: LLHSVGFRVLVSKTRLYFVLSVM*TLLYTL Trigger: TAACGTGTACAACAAGGTCCACATCACGCTGAGCAC...GAAATAAAGTCTTGTCTTAGAAACCAGGACCCTAAACCCCACACTATGTAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | TGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAAGAAAGGGGAGAGTTTAGCAGGGTCTATGTCATaGACACTGCTACTTGTTCGA | + |
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Preference number: 4 (lower is better) Translates to: WQENHYCCWEVAKKGESLAGSMS*TLLLVR Trigger: TCGAACAAGTAGCAGTGTCCATGACATAGACCCTGC...TAAACTCTCCCCTTTCTTTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | CTGGGAAGTTGCAAAGAAAGGGGAGAGTTTATTCAAATTAGTGTAACAGAGCCCGAGCAAGAGACGGCCTaGCAAGAAAATCATTATTGT | + |
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Preference number: 4 (lower is better) Translates to: LGSCKERGEFIQISVTEPEQETA*QENHYC Trigger: ACAATAATGATTTTCTTGCCAGGCCGTCTCTTGCTC...GGGCTCTGTTACACTAATTTGAATAAACTCTCCCCTTTCTTTGCAACTTCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | GTGTTTCTATTACATAGTGTGGGGTTTAGGGTCCTGGTTTCTAAGACAAGACTTAATCATTATTGTTGCTaGGAAGTTGCAAAGAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: VFLLHSVGFRVLVSKTRLNHYCC*EVAKKG Trigger: CCCTTTCTTTGCAACTTCCCAGCAACAATAATGATT...AAGTCTTGTCTTAGAAACCAGGACCCTAAACCCCACACTATGTAATAGAAACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CCA 90 bp | TTTCTAAGACAAGACTTTATTTCACCCTGTATCACAGCTTCCTGGGAAATGAATTTCTATTACATAGTGTaGGGTTTAGGGTCCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: FLRQDFISPCITASWEMNFYYIV*GLGSWF Trigger: AAACCAGGACCCTAAACCCCACACTATGTAATAGAA...ATTCATTTCCCAGGAAGCTGTGATACAGGGTGAAATAAAGTCTTGTCTTAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS CCA 90 bp | CCCCGTGGCCTGGCACGGGCCTCAAGCCGGCGCGGGGAGTGGCTCTaGGGCCAGCATACCGGCGCAGAGCGTGAGTCCCAGGCAGACCCC | + |
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Preference number: 5 (lower is better) Translates to: PRGLARASSRRGEWL*GQHTGAERESQADP Trigger: GGGGTCTGCCTGGGACTCACGCTCTGCGCCGGTATGCTGGCCCCAGAGCCACTCCCCGCGCCGGCTTGAGGCCCGTGCCAGGCCACGGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493228.1 |
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| CDS GCA 90 bp | ATACCGGCGCAGAGCGTGAGTCCCAGGCAGACCCCGTACCCAGAGTaGCAGCGGGAAGGGGCAGCGGACAGGCACGCACACGAGCGCGCA | + |
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Preference number: 5 (lower is better) Translates to: IPAQSVSPRQTPYPE*QREGAADRHAHERA Trigger: TGCGCGCTCGTGTGCGTGCCTGTCCGCTGCCCCTTCCCGCTGGCACTCTGGGTACGGGGTCTGCCTGGGACTCACGCTCTGCGCCGGTAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493228.1 |
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| CDS CCA 90 bp | GGCATCACGGCCTTCCAGCTCATTCCACCCCACAGCCCTCAGGTTTaGCAGCAGCTGGTCCCTCTCCTCAGCGCTCAGCCTGTGTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: GITAFQLIPPHSPQV*QQLVPLLSAQPVCF Trigger: AAAGCACACAGGCTGAGCGCTGAGGAGAGGGACCAGCTGCTGCCAAACCTGAGGGCTGTGGGGTGGAATGAGCTGGAAGGCCGTGATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299299.4 ENST00000493228.1 |
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| CDS CCA 90 bp | CCTGTGTGCTTTGCCAGCCTGCTCCGAAGGCCTGTGGACCAGAAATaGTCTGATGAAGCTCGCGAGCTTACAGCAGAGCAAGGGCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: PVCFASLLRRPVDQK*SDEARELTAEQGPR Trigger: GCGGGGCCCTTGCTCTGCTGTAAGCTCGCGAGCTTCATCAGACCATTTCTGGTCCACAGGCCTTCGGAGCAGGCTGGCAAAGCACACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493228.1 |
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| CDS TCA 90 bp | CACTGCTACTTGTTCGATGAAGCTGGCCAGGTTTATGTCCCGTTCTaGAAGGCCGGCACACTCATGGGTGCTCAGCGTGATGTGGACCTT | + |
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Preference number: 5 (lower is better) Translates to: HCYLFDEAGQVYVPF*KAGTLMGAQRDVDL Trigger: AAGGTCCACATCACGCTGAGCACCCATGAGTGTGCCGGCCTTTCAGAACGGGACATAAACCTGGCCAGCTTCATCGAACAAGTAGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299299.4 ENST00000493228.1 |
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| CDS-3UTR CAA 90 bp | CACATGTGTTTCTATTACATAGTGTGGGGTTTAGGGTCCTGGTTTCTAAGACAAGGCGGCGGCTGGGTCTaGGGAGGGGAGTGGTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: HMCFYYIVWGLGSWFLRQGGGWV*GGEWWE Trigger: CTCCCACCACTCCCCTCCCAAGACCCAGCCGCCGCC...TTGTCTTAGAAACCAGGACCCTAAACCCCACACTATGTAATAGAAACACATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS TCA 90 bp | AGAGGAAGGGCAGGGTCTATGTCATGGACACTGCTACTTGTTCGATaGAGCTGGCCAGGTTTATGTCCCGTTCTGAAAGGCCGGCACACT | + |
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Preference number: 5 (lower is better) Translates to: RGRAGSMSWTLLLVR*SWPGLCPVLKGRHT Trigger: AGTGTGCCGGCCTTTCAGAACGGGACATAAACCTGGCCAGCTTCATCGAACAAGTAGCAGTGTCCATGACATAGACCCTGCCCTTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299299.4 ENST00000493228.1 |
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| CDS-3UTR CAA 90 bp | ACGGCCTGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAAGAAAGGGGAGCCACAGCCCTCAGGTTaGGCAGCAGCTGGTCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: TAWQENHYCCWEVAKKGEPQPSG*AAAGPS Trigger: AGAGGGACCAGCTGCTGCCAAACCTGAGGGCTGTGG...CTCCCCTTTCTTTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCAGGCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS CCA 90 bp | AAGCTGGCCAGGTTTATGTCCCGTTCTGAAAGGCCGGCACACTCATaGGTGCTCAGCGTGATGTGGACCTTGTTGTACACGTTAAACCAT | + |
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Preference number: 5 (lower is better) Translates to: KLARFMSRSERPAHS*VLSVMWTLLYTLNH Trigger: ATGGTTTAACGTGTACAACAAGGTCCACATCACGCTGAGCACCCATGAGTGTGCCGGCCTTTCAGAACGGGACATAAACCTGGCCAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299299.4 ENST00000493228.1 |
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| CDS CCA 90 bp | GTCCCAAGATCTGTAGTTGGCAAGCTGGAGAACCAGGAAAGCAGATaGTATTGTTGCACACCGGAGGCTTGTAGCCTTGAGACCTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: VPRSVVGKLENQESR*YCCTPEACSLETLL Trigger: CAACAAGGTCTCAAGGCTACAAGCCTCCGGTGTGCAACAATACCATCTGCTTTCCTGGTTCTCCAGCTTGCCAACTACAGATCTTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493961.5 |
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| CDS-3UTR CAA 90 bp | CTATTACATAGTGTGGGGTTTAGGGTCCTGGTTTCTAAGACAAGACTTTATTTCCTCAGCCTGTGTGCTTaGCCAGCCATGGCGCGGGCG | + |
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Preference number: 5 (lower is better) Translates to: LLHSVGFRVLVSKTRLYFLSLCA*PAMARA Trigger: CGCCCGCGCCATGGCTGGCAAAGCACACAGGCTGAG...GAAATAAAGTCTTGTCTTAGAAACCAGGACCCTAAACCCCACACTATGTAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS GCA 90 bp | TTGTACACGTTAAACCATTCAGGATGGTGGTCCAGTTTCTCAGCCTaGAGGGCCACTCTTGTCATGAACCCAAAGGCCCTGTTGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: LYTLNHSGWWSSFSA*RATLVMNPKALLKS Trigger: AGACTTCAACAGGGCCTTTGGGTTCATGACAAGAGTGGCCCTGCAGGCTGAGAAACTGGACCACCATCCTGAATGGTTTAACGTGTACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000299299.4 ENST00000493228.1 ENST00000493961.5 |
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| CDS-3UTR CAA 90 bp | AGACGGCCTGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAAGAAAGGGGCATGGACACTGCTACTaGTTCGATGAAGCTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RRPGKKIIIVAGKLQRKGHGHCY*FDEAGQ Trigger: CTGGCCAGCTTCATCGAACAAGTAGCAGTGTCCATG...CCCCTTTCTTTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCAGGCCGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CAA 90 bp | CTGGGAAGTTGCAAAGAAAGGGGAGAGTTTATTCAAATTAGTGTAACAGAGCCCTCTAAATTCCTGGTGTaGGTGGGGACACTGGCACAT | + |
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Preference number: 5 (lower is better) Translates to: LGSCKERGEFIQISVTEPSKFLV*VGTLAH Trigger: ATGTGCCAGTGTCCCCACCAACACCAGGAATTTAGA...GGGCTCTGTTACACTAATTTGAATAAACTCTCCCCTTTCTTTGCAACTTCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CAA 90 bp | TGGCAAGAAAATCATTATTGTTGCTGGGAAGTTGCAAAGAAAGGGGAGAGTTTAAGCGTGATGTGGACCTaGTTGTACACGTTAAACCAT | + |
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Preference number: 5 (lower is better) Translates to: WQENHYCCWEVAKKGESLSVMWT*LYTLNH Trigger: ATGGTTTAACGTGTACAACAAGGTCCACATCACGCT...TAAACTCTCCCCTTTCTTTGCAACTTCCCAGCAACAATAATGATTTTCTTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS-3UTR CAA 90 bp | CTGGGAAGTTGCAAAGAAAGGGGAGAGTTTATTCAAATTAGTGTAACAGAGCCCGCAAGAAAATCATTATaGTTGCTGGGAAGTTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: LGSCKERGEFIQISVTEPARKSL*LLGSCK Trigger: TTTGCAACTTCCCAGCAACAATAATGATTTTCTTGC...GGGCTCTGTTACACTAATTTGAATAAACTCTCCCCTTTCTTTGCAACTTCCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299299.4 |
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| CDS CCA 72 bp | GGAGGGCTGCTCCAGCGCCACCAAGCCCCCGTGGCCTaGCACGGGCCTCAAGCCGGCGCGGGGAGTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GGLLQRHQAPVA*HGPQAGAGSGS Trigger: AGAGCCACTCCCCGCGCCGGCTTGAGGCCCGTGCCAGGCCACGGGGGCTTGGTGGCGCTGGAGCAGCCCTCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493228.1 |
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| CDS CCA 72 bp | CGTGGCCTGGCACGGGCCTCAAGCCGGCGCGGGGAGTaGCTCTGGGGCCAGCATACCGGCGCAGAGCGTGAG | + |
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Preference number: 6 (lower is better) Translates to: RGLARASSRRGE*LWGQHTGAERE Trigger: CTCACGCTCTGCGCCGGTATGCTGGCCCCAGAGCCACTCCCCGCGCCGGCTTGAGGCCCGTGCCAGGCCACG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493228.1 |
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| CDS CCA 72 bp | CTGGCACGGGCCTCAAGCCGGCGCGGGGAGTGGCTCTaGGGCCAGCATACCGGCGCAGAGCGTGAGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LARASSRRGEWL*GQHTGAERESQ Trigger: CTGGGACTCACGCTCTGCGCCGGTATGCTGGCCCCAGAGCCACTCCCCGCGCCGGCTTGAGGCCCGTGCCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493228.1 |
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| CDS GCA 72 bp | CAGAGCGTGAGTCCCAGGCAGACCCCGTACCCAGAGTaGCAGCGGGAAGGGGCAGCGGACAGGCACGCACAC | + |
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Preference number: 6 (lower is better) Translates to: QSVSPRQTPYPE*QREGAADRHAH Trigger: GTGTGCGTGCCTGTCCGCTGCCCCTTCCCGCTGGCACTCTGGGTACGGGGTCTGCCTGGGACTCACGCTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493228.1 |
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| CDS CAA 72 bp | GGCCTTCCAGCTCATTCCACCCCACAGCCCTCAGGTTaGGCAGCAGCTGGTCCCTCTCCTCAGCGCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GLPAHSTPQPSG*AAAGPSPQRSA Trigger: GGCTGAGCGCTGAGGAGAGGGACCAGCTGCTGCCAAACCTGAGGGCTGTGGGGTGGAATGAGCTGGAAGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299299.4 ENST00000493228.1 |
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| CDS CCA 72 bp | GCCTTCCAGCTCATTCCACCCCACAGCCCTCAGGTTTaGCAGCAGCTGGTCCCTCTCCTCAGCGCTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: AFQLIPPHSPQV*QQLVPLLSAQP Trigger: AGGCTGAGCGCTGAGGAGAGGGACCAGCTGCTGCCAAACCTGAGGGCTGTGGGGTGGAATGAGCTGGAAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299299.4 ENST00000493228.1 |
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| CDS CAA 90 bp | TGGCATCACGGCCTTCCAGCTCATTCCACCCCACAGCCCTCAGGTTaGGCAGCAGCTGGTCCCTCTCCTCAGCGCTCAGCCTGTGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: WHHGLPAHSTPQPSG*AAAGPSPQRSACVL Trigger: AAGCACACAGGCTGAGCGCTGAGGAGAGGGACCAGCTGCTGCCAAACCTGAGGGCTGTGGGGTGGAATGAGCTGGAAGGCCGTGATGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299299.4 ENST00000493228.1 |
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| CDS CCA 72 bp | AGCCTGTGTGCTTTGCCAGCCTGCTCCGAAGGCCTGTaGACCAGAAATGGTCTGATGAAGCTCGCGAGCTTA | + |
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Preference number: 6 (lower is better) Translates to: SLCALPACSEGL*TRNGLMKLASL Trigger: TAAGCTCGCGAGCTTCATCAGACCATTTCTGGTCCACAGGCCTTCGGAGCAGGCTGGCAAAGCACACAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493228.1 |
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| CDS CCA 72 bp | TTTGCCAGCCTGCTCCGAAGGCCTGTGGACCAGAAATaGTCTGATGAAGCTCGCGAGCTTACAGCAGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: FASLLRRPVDQK*SDEARELTAEQ Trigger: TTGCTCTGCTGTAAGCTCGCGAGCTTCATCAGACCATTTCTGGTCCACAGGCCTTCGGAGCAGGCTGGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493228.1 |
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| CDS TCA 72 bp | TTGTTCGATGAAGCTGGCCAGGTTTATGTCCCGTTCTaGAAGGCCGGCACACTCATGGGTGCTCAGCGTGAT | + |
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Preference number: 6 (lower is better) Translates to: LFDEAGQVYVPF*KAGTLMGAQRD Trigger: ATCACGCTGAGCACCCATGAGTGTGCCGGCCTTTCAGAACGGGACATAAACCTGGCCAGCTTCATCGAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299299.4 ENST00000493228.1 |
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| CDS CCA 72 bp | AGGTTTATGTCCCGTTCTGAAAGGCCGGCACACTCATaGGTGCTCAGCGTGATGTGGACCTTGTTGTACACG | + |
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Preference number: 6 (lower is better) Translates to: RFMSRSERPAHS*VLSVMWTLLYT Trigger: CGTGTACAACAAGGTCCACATCACGCTGAGCACCCATGAGTGTGCCGGCCTTTCAGAACGGGACATAAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299299.4 ENST00000493228.1 |
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| CDS CAA 72 bp | GAGGAAGGGCAGGGTCTATGTCATGGACACTGCTACTaGTTCGATGAAGCTGGCCAGGTTTATGTCCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: EEGQGLCHGHCY*FDEAGQVYVPF Trigger: GAACGGGACATAAACCTGGCCAGCTTCATCGAACAAGTAGCAGTGTCCATGACATAGACCCTGCCCTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299299.4 ENST00000493228.1 |
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| CDS TCA 72 bp | GCAGGGTCTATGTCATGGACACTGCTACTTGTTCGATaGAGCTGGCCAGGTTTATGTCCCGTTCTGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: AGSMSWTLLLVR*SWPGLCPVLKG Trigger: GCCTTTCAGAACGGGACATAAACCTGGCCAGCTTCATCGAACAAGTAGCAGTGTCCATGACATAGACCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299299.4 ENST00000493228.1 |
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| CDS CCA 72 bp | TCTGTAGTTGGCAAGCTGGAGAACCAGGAAAGCAGATaGTATTGTTGCACACCGGAGGCTTGTAGCCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SVVGKLENQESR*YCCTPEACSLE Trigger: CTCAAGGCTACAAGCCTCCGGTGTGCAACAATACCATCTGCTTTCCTGGTTCTCCAGCTTGCCAACTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493961.5 |
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| CDS CAA 72 bp | TGTTGCACACCGGAGGCTTGTAGCCTTGAGACCTTGTaGTACACGTTAAACCATTCAGGATGGTGGTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: CCTPEACSLETL*YTLNHSGWWSS Trigger: ACTGGACCACCATCCTGAATGGTTTAACGTGTACAACAAGGTCTCAAGGCTACAAGCCTCCGGTGTGCAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493961.5 |
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| CDS CAA 90 bp | AGATGGTATTGTTGCACACCGGAGGCTTGTAGCCTTGAGACCTTGTaGTACACGTTAAACCATTCAGGATGGTGGTCCAGTTTCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RWYCCTPEACSLETL*YTLNHSGWWSSFSA Trigger: GGCTGAGAAACTGGACCACCATCCTGAATGGTTTAACGTGTACAACAAGGTCTCAAGGCTACAAGCCTCCGGTGTGCAACAATACCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493961.5 |
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| CDS CAA 72 bp | TATTGTTGCACACCGGAGGCTTGTAGCCTTGAGACCTaGTTGTACACGTTAAACCATTCAGGATGGTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: YCCTPEACSLET*LYTLNHSGWWS Trigger: GGACCACCATCCTGAATGGTTTAACGTGTACAACAAGGTCTCAAGGCTACAAGCCTCCGGTGTGCAACAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493961.5 |
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| CDS CAA 90 bp | AGCAGATGGTATTGTTGCACACCGGAGGCTTGTAGCCTTGAGACCTaGTTGTACACGTTAAACCATTCAGGATGGTGGTCCAGTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SRWYCCTPEACSLET*LYTLNHSGWWSSFS Trigger: TGAGAAACTGGACCACCATCCTGAATGGTTTAACGTGTACAACAAGGTCTCAAGGCTACAAGCCTCCGGTGTGCAACAATACCATCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493961.5 |
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