Pregenerated sensors for PBDC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000102390Ensembl transcript IDs: ENST00000373357.3, ENST00000373358.8
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGGAATaGCCAGAGCAGCTCCTGACTGTTAGACTAGAAAGATGTCCTTCT | + |
Preference number: 1 (lower is better) Translates to: TNTPLTVFRPVHTRE*PEQLLTVRLERCPS Trigger: AGAAGGACATCTTTCTAGTCTAACAGTCAGGAGCTGCTCTGGTCATTCCCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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3UTR-3UTR TCA 90 bp | GAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGGAAACTTGTAGTCTCAATTaGGTCATAGCTTCTAGAGTG | + |
Preference number: 2 (lower is better) Translates to: EKSTNTPLTVFRPVHTRETCSLN*VIASRV Trigger: CACTCTAGAAGCTATGACTCAATTGAGACTACAAGT...TTCCCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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3UTR-3UTR GCA 90 bp | TATTTACAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGAGAAAGATGTCCTTCTaGGTATCCTTCAATTGTACA | + |
Preference number: 2 (lower is better) Translates to: YLQISYLTSSVSQETVYQRKMSF*VSFNCT Trigger: TGTACAATTGAAGGATACGCAGAAGGACATCTTTCT...CTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTGTAAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | CCAGAGCAGCTCCTGACTGTTAGACTAGAAAGATGTCCTTCTGCGTATCCTTCACCTTCCGCAGCTGATTaGAAAGCTGAGCCGGATCAG | + |
Preference number: 4 (lower is better) Translates to: PEQLLTVRLERCPSAYPSPSAAD*KAEPDQ Trigger: CTGATCCGGCTCAGCTTTCCAATCAGCTGCGGAAGG...TGAAGGATACGCAGAAGGACATCTTTCTAGTCTAACAGTCAGGAGCTGCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS-3UTR GCA 90 bp | TCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAATCAACTTGGTGGCCGCCATCTTaGAACCCCCGAAAGCGTGGC | + |
Preference number: 4 (lower is better) Translates to: SYLTSSVSQETVYQEKSTWWPPS*NPRKRG Trigger: GCCACGCTTTCGGGGGTTGCAAGATGGCGGCCACCA...AGTTGATTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | CAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGCAACCCCCGAAAGCGTaGCTCCTTCCGCAGCTGATT | + |
Preference number: 4 (lower is better) Translates to: QEKSTNTPLTVFRPVHTRQPPKA*LLPQLI Trigger: AATCAGCTGCGGAAGGAGCCACGCTTTCGGGGGTTG...CCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | TACCAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGAGTCCTTCTCAACTaGCGGCTCCACCGTGCGCTC | + |
Preference number: 4 (lower is better) Translates to: YQEKSTNTPLTVFRPVHTRVLLN*RLHRAL Trigger: GAGCGCACGGTGGAGCCGCCAGTTGAGAAGGACTCT...TGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373357.3 |
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CDS-3UTR GCA 90 bp | TATTTACAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGTGGTGGCCGCCATCTTaGAACCCCCGAAAGCGTGGC | + |
Preference number: 4 (lower is better) Translates to: YLQISYLTSSVSQETVYQWWPPS*NPRKRG Trigger: GCCACGCTTTCGGGGGTTGCAAGATGGCGGCCACCA...CTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTGTAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | TCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAATCAACTCAACCCCCGAAAGCGTaGCTCCTTCCGCAGCTGATT | + |
Preference number: 4 (lower is better) Translates to: SYLTSSVSQETVYQEKSTQPPKA*LLPQLI Trigger: AATCAGCTGCGGAAGGAGCCACGCTTTCGGGGGTTG...AGTTGATTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | CAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGGCCATACGACTCTGCTaGGAGAGAAAGCGCATGTGC | + |
Preference number: 4 (lower is better) Translates to: QEKSTNTPLTVFRPVHTRAIRLC*ERKRMC Trigger: GCACATGCGCTTTCTCTCCCAGCAGAGTCGTATGGC...CCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | TCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAATCAACTCCTTCCGCAGCTGATTaGAAAGCTGAGCCGGATCAG | + |
Preference number: 4 (lower is better) Translates to: SYLTSSVSQETVYQEKSTPSAAD*KAEPDQ Trigger: CTGATCCGGCTCAGCTTTCCAATCAGCTGCGGAAGG...AGTTGATTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | GAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGGAAGCTCATCAGTTCCACTaGTGGCCGCCATCTTGCAAC | + |
Preference number: 4 (lower is better) Translates to: EKSTNTPLTVFRPVHTREAHQFH*WPPSCN Trigger: GTTGCAAGATGGCGGCCACCAGTGGAACTGATGAGC...TTCCCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR GCA 90 bp | TTACAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAGAGAGAAAGCGCATGTaGCACAGACACCAACTCCCC | + |
Preference number: 4 (lower is better) Translates to: LQISYLTSSVSQETVYQEERKRM*HRHQLP Trigger: GGGGAGTTGGTGTCTGTGGCACATGCGCTTTCTCTC...TTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR GCA 90 bp | CAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAAGAGAGAAAGCGCATGTaGCACAGACACCAACTCCCC | + |
Preference number: 4 (lower is better) Translates to: QISYLTSSVSQETVYQEKERKRM*HRHQLP Trigger: GGGGAGTTGGTGTCTGTGGCACATGCGCTTTCTCTC...TTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR GCA 90 bp | GTATACCAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATGTTGCCATACGACTCTaGTGGGAGAGAAAGCGCATG | + |
Preference number: 4 (lower is better) Translates to: VYQEKSTNTPLTVFRPVHVAIRL*WERKRM Trigger: CATGCGCTTTCTCTCCCAGCAGAGTCGTATGGCAAC...ATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTGGTATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR GCA 90 bp | CAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGCAATGTCAGGATCGTTaGCATACGACTCTGCTGGGA | + |
Preference number: 4 (lower is better) Translates to: QEKSTNTPLTVFRPVHTRQCQDR*HTTLLG Trigger: TCCCAGCAGAGTCGTATGGCAACGATCCTGACATTG...CCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | TATTTACAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGCATCAGTTCCACTGGTaGCCGCCATCTTGCAACCCC | + |
Preference number: 4 (lower is better) Translates to: YLQISYLTSSVSQETVYQHQFHW*PPSCNP Trigger: GGGGTTGCAAGATGGCGGCCACCAGTGGAACTGATG...CTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTGTAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | ATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAATCAGCTCATCAGTTCCACTaGTGGCCGCCATCTTGCAAC | + |
Preference number: 4 (lower is better) Translates to: ISYLTSSVSQETVYQEKSAHQFH*WPPSCN Trigger: GTTGCAAGATGGCGGCCACCAGTGGAACTGATGAGC...TGATTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | ATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAATCAGCCATACGACTCTGCTaGGAGAGAAAGCGCATGTGC | + |
Preference number: 4 (lower is better) Translates to: ISYLTSSVSQETVYQEKSAIRLC*ERKRMC Trigger: GCACATGCGCTTTCTCTCCCAGCAGAGTCGTATGGC...TGATTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR TCA 90 bp | TACCAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAGTTCATACAAGGGAATaGCCAGAGCAGCTCCTGACT | + |
Preference number: 4 (lower is better) Translates to: YQEKSTNTPLTVFRPVHTVHTRE*PEQLLT Trigger: AGTCAGGAGCTGCTCTGGTCATTCCCTTGTATGAAC...TGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR GCA 90 bp | TCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAATCAACTTTCAGCATGCTGCATTaGTCTCATGGCCCAAGCCAT | + |
Preference number: 4 (lower is better) Translates to: SYLTSSVSQETVYQEKSTFSMLH*SHGPSH Trigger: ATGGCTTGGGCCATGAGAGCAATGCAGCATGCTGAA...AGTTGATTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR GCA 90 bp | GAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGGAATTCAGCATGCTGCATTaGTCTCATGGCCCAAGCCAT | + |
Preference number: 4 (lower is better) Translates to: EKSTNTPLTVFRPVHTREFSMLH*SHGPSH Trigger: ATGGCTTGGGCCATGAGAGCAATGCAGCATGCTGAA...TTCCCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | TCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAATCAACTTCCTGGGGGCAAAGATaGTGTTTTCCTCAGTGTAGC | + |
Preference number: 4 (lower is better) Translates to: SYLTSSVSQETVYQEKSTSWGQR*CFPQCS Trigger: GCTACACTGAGGAAAACACCATCTTTGCCCCCAGGA...AGTTGATTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS-3UTR TCA 90 bp | GAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGGAAGGTCATCTACTTTGGTaGGTTTCAGGAACTGTGGGT | + |
Preference number: 4 (lower is better) Translates to: EKSTNTPLTVFRPVHTREGHLLW*VSGTVG Trigger: ACCCACAGTTCCTGAAACTCACCAAAGTAGATGACC...TTCCCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR TCA 90 bp | CAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAAGTTCATACAAGGGAATaGCCAGAGCAGCTCCTGACT | + |
Preference number: 4 (lower is better) Translates to: QISYLTSSVSQETVYQEKVHTRE*PEQLLT Trigger: AGTCAGGAGCTGCTCTGGTCATTCCCTTGTATGAAC...TTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR GCA 90 bp | ATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAATCACAATGTCAGGATCGTTaGCATACGACTCTGCTGGGA | + |
Preference number: 4 (lower is better) Translates to: ISYLTSSVSQETVYQEKSQCQDR*HTTLLG Trigger: TCCCAGCAGAGTCGTATGGCAACGATCCTGACATTG...TGATTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | TACAAGAATTTACATTTAACCAAAGGGGTCTGTGCAAGTAGCACCGTGGTACTTAAACTTCAAGCAGAATaGCCTCCACTTCTCTTTGGC | + |
Preference number: 4 (lower is better) Translates to: YKNLHLTKGVCASSTVVLKLQAE*PPLLFG Trigger: GCCAAAGAGAAGTGGAGGCCATTCTGCTTGAAGTTT...AAGTACCACGGTGCTACTTGCACAGACCCCTTTGGTTAAATGTAAATTCTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS-3UTR TCA 90 bp | TATTTACAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGGTCATCTACTTTGGTaGGTTTCAGGAACTGTGGGT | + |
Preference number: 4 (lower is better) Translates to: YLQISYLTSSVSQETVYQGHLLW*VSGTVG Trigger: ACCCACAGTTCCTGAAACTCACCAAAGTAGATGACC...CTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTGTAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR TCA 90 bp | TACCAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAACTTGTAGTCTCAATTaGGTCATAGCTTCTAGAGTG | + |
Preference number: 4 (lower is better) Translates to: YQEKSTNTPLTVFRPVHTTCSLN*VIASRV Trigger: CACTCTAGAAGCTATGACTCAATTGAGACTACAAGT...TGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTGGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR TCA 90 bp | TACCAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACATACAAATTTCTTACTTaGCCAGTAGTGTCAGCCAAG | + |
Preference number: 4 (lower is better) Translates to: YQEKSTNTPLTVFRPVHTYKFLT*PVVSAK Trigger: CTTGGCTGACACTACTGGTCAAGTAAGAAATTTGTA...TGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTGGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | GTATACCAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATCAAAGAATTGTATCCTaGGGGCAAAGATGGTGTTTT | + |
Preference number: 4 (lower is better) Translates to: VYQEKSTNTPLTVFRPVHQRIVS*GQRWCF Trigger: AAAACACCATCTTTGCCCCCAGGATACAATTCTTTG...ATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTGGTATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | TACCAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACATCCGAGCAATTTCAATaGCAAAGAATTGTATCCTGG | + |
Preference number: 4 (lower is better) Translates to: YQEKSTNTPLTVFRPVHTSEQFQ*QRIVSW Trigger: CCAGGATACAATTCTTTGCCATTGAAATTGCTCGGA...TGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTGGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR TCA 90 bp | TATTTACAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGCAAAGTACCATAGTTaGAGTCTTCAACAATCCCAT | + |
Preference number: 4 (lower is better) Translates to: YLQISYLTSSVSQETVYQAKYHS*SLQQSH Trigger: ATGGGATTGTTGAAGACTTCAACTATGGTACTTTGC...CTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTGTAAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS-3UTR TCA 90 bp | TATTTACAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGTACAAATTTCTTACTTaGCCAGTAGTGTCAGCCAAG | + |
Preference number: 4 (lower is better) Translates to: YLQISYLTSSVSQETVYQYKFLT*PVVSAK Trigger: CTTGGCTGACACTACTGGTCAAGTAAGAAATTTGTA...CTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTGTAAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR GCA 90 bp | ATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAATCAAGAAAGATGTCCTTCTaGGTATCCTTCAATTGTACA | + |
Preference number: 4 (lower is better) Translates to: ISYLTSSVSQETVYQEKSRKMSF*VSFNCT Trigger: TGTACAATTGAAGGATACGCAGAAGGACATCTTTCT...TGATTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CCA 90 bp | GTTAGACTAGAAAGATGTCCTTCTGCGTATCCTTCAATTGTACAAGAATTTACATCCGAGCAATTTCAATaGCAAAGAATTGTATCCTGG | + |
Preference number: 4 (lower is better) Translates to: VRLERCPSAYPSIVQEFTSEQFQ*QRIVSW Trigger: CCAGGATACAATTCTTTGCCATTGAAATTGCTCGGA...TGTAAATTCTTGTACAATTGAAGGATACGCAGAAGGACATCTTTCTAGTCTAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS CCA 90 bp | CGCCATCTTGCAACCCCCGAAAGCGTGGCTCCTTCCGCAGCTGATTaGAAAGCTGAGCCGGATCAGAGTCCTTCTCAACTGGCGGCTCCA | + |
Preference number: 5 (lower is better) Translates to: RHLATPESVAPSAAD*KAEPDQSPSQLAAP Trigger: TGGAGCCGCCAGTTGAGAAGGACTCTGATCCGGCTCAGCTTTCCAATCAGCTGCGGAAGGAGCCACGCTTTCGGGGGTTGCAAGATGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373357.3 |
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CDS CCA 90 bp | TCATCAGTTCCACTGGTGGCCGCCATCTTGCAACCCCCGAAAGCGTaGCTCCTTCCGCAGCTGATTGGAAAGCTGAGCCGGATCAGAGTC | + |
Preference number: 5 (lower is better) Translates to: SSVPLVAAILQPPKA*LLPQLIGKLSRIRV Trigger: GACTCTGATCCGGCTCAGCTTTCCAATCAGCTGCGGAAGGAGCCACGCTTTCGGGGGTTGCAAGATGGCGGCCACCAGTGGAACTGATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS GCA 90 bp | GTCAGGATCGTTGCCATACGACTCTGCTGGGAGAGAAAGCGCATGTaGCACAGACACCAACTCCCCGGAAACCGGCTCATCAGTTCCACT | + |
Preference number: 5 (lower is better) Translates to: VRIVAIRLCWERKRM*HRHQLPGNRLISST Trigger: AGTGGAACTGATGAGCCGGTTTCCGGGGAGTTGGTGTCTGTGGCACATGCGCTTTCTCTCCCAGCAGAGTCGTATGGCAACGATCCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS CCA 90 bp | GGCCCAAGCCATCTCAATGTCAGGATCGTTGCCATACGACTCTGCTaGGAGAGAAAGCGCATGTGCCACAGACACCAACTCCCCGGAAAC | + |
Preference number: 5 (lower is better) Translates to: GPSHLNVRIVAIRLC*ERKRMCHRHQLPGN Trigger: GTTTCCGGGGAGTTGGTGTCTGTGGCACATGCGCTTTCTCTCCCAGCAGAGTCGTATGGCAACGATCCTGACATTGAGATGGCTTGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | GAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGGAACTGGTGGCCGCCATCTaGCAACCCCCGAAAGCGTGG | + |
Preference number: 5 (lower is better) Translates to: EKSTNTPLTVFRPVHTRELVAAI*QPPKAW Trigger: CCACGCTTTCGGGGGTTGCAAGATGGCGGCCACCAG...TTCCCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | TATTTACAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGCTGGTGGCCGCCATCTaGCAACCCCCGAAAGCGTGG | + |
Preference number: 5 (lower is better) Translates to: YLQISYLTSSVSQETVYQLVAAI*QPPKAW Trigger: CCACGCTTTCGGGGGTTGCAAGATGGCGGCCACCAG...CTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTGTAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS CCA 90 bp | ATGAAATCAGCTTGTAATAGACTTCAGCATGCTGCATTGCTCTCATaGCCCAAGCCATCTCAATGTCAGGATCGTTGCCATACGACTCTG | + |
Preference number: 5 (lower is better) Translates to: MKSACNRLQHAALLS*PKPSQCQDRCHTTL Trigger: CAGAGTCGTATGGCAACGATCCTGACATTGAGATGGCTTGGGCCATGAGAGCAATGCAGCATGCTGAAGTCTATTACAAGCTGATTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | TACAAGAATTTACATTTAACCAAAGGGGTCTGTGCAAGTAGCACCGTGGTACTTTCAATGTCAGGATCGTaGCCATACGACTCTGCTGGG | + |
Preference number: 5 (lower is better) Translates to: YKNLHLTKGVCASSTVVLSMSGS*PYDSAG Trigger: CCCAGCAGAGTCGTATGGCAACGATCCTGACATTGA...AAGTACCACGGTGCTACTTGCACAGACCCCTTTGGTTAAATGTAAATTCTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | GAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGGAACTTCAGCATGCTGCATaGCTCTCATGGCCCAAGCCA | + |
Preference number: 5 (lower is better) Translates to: EKSTNTPLTVFRPVHTRELQHAA*LSWPKP Trigger: TGGCTTGGGCCATGAGAGCAATGCAGCATGCTGAAG...TTCCCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | CCAGAGCAGCTCCTGACTGTTAGACTAGAAAGATGTCCTTCTGCGTATCCTTCAGAACTCAGAGTAAATTaGGTCATCTACTTTGGTGAG | + |
Preference number: 5 (lower is better) Translates to: PEQLLTVRLERCPSAYPSELRVN*VIYFGE Trigger: CTCACCAAAGTAGATGACCAAATTTACTCTGAGTTC...TGAAGGATACGCAGAAGGACATCTTTCTAGTCTAACAGTCAGGAGCTGCTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | ATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAATCATCAATGTCAGGATCGTaGCCATACGACTCTGCTGGG | + |
Preference number: 5 (lower is better) Translates to: ISYLTSSVSQETVYQEKSSMSGS*PYDSAG Trigger: CCCAGCAGAGTCGTATGGCAACGATCCTGACATTGA...TGATTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | CAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGTTGGCTGATTCTGACTaGAGTTCTTCTGGGTCCAAC | + |
Preference number: 5 (lower is better) Translates to: QEKSTNTPLTVFRPVHTRLADSD*SSSGSN Trigger: GTTGGACCCAGAAGAACTCAAGTCAGAATCAGCCAA...CCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | TCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAATCAACTTATCCTGGGGGCTCTTaGGCTGATTCTGACTTGAGT | + |
Preference number: 5 (lower is better) Translates to: SYLTSSVSQETVYQEKSTYPGGS*ADSDLS Trigger: ACTCAAGTCAGAATCAGCCAAAGAGCCCCCAGGATA...AGTTGATTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000373357.3 |
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CDS-3UTR CAA 90 bp | GAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGGAATTGGCTGATTCTGACTaGAGTTCTTCTGGGTCCAAC | + |
Preference number: 5 (lower is better) Translates to: EKSTNTPLTVFRPVHTRELADSD*SSSGSN Trigger: GTTGGACCCAGAAGAACTCAAGTCAGAATCAGCCAA...TTCCCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | TACAAGAATTTACATTTAACCAAAGGGGTCTGTGCAAGTAGCACCGTGGTACTTCCTCCTTTGTCAGTTTaGTCTTCTCTGTTGATTCCT | + |
Preference number: 5 (lower is better) Translates to: YKNLHLTKGVCASSTVVLPPLSV*SSLLIP Trigger: AGGAATCAACAGAGAAGACAAAACTGACAAAGGAGG...AAGTACCACGGTGCTACTTGCACAGACCCCTTTGGTTAAATGTAAATTCTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | CAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGATTTGGTCATCTACTTaGGTGAGTTTCAGGAACTGT | + |
Preference number: 5 (lower is better) Translates to: QEKSTNTPLTVFRPVHTRIWSST*VSFRNC Trigger: ACAGTTCCTGAAACTCACCAAAGTAGATGACCAAAT...CCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | TTACAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAATTCAATGGCAAAGAATaGTATCCTGGGGGCTCTTTG | + |
Preference number: 5 (lower is better) Translates to: LQISYLTSSVSQETVYQEFNGKE*YPGGSL Trigger: CAAAGAGCCCCCAGGATACAATTCTTTGCCATTGAA...TTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373357.3 |
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CDS-3UTR CAA 90 bp | CAGGAAAAATCAACTAACACCCCACTAACAGTCTTTAGACCAGTTCATACAAGGGCTTTTTCACCACTTTaGTTGATTTCTTTGTCAGCT | + |
Preference number: 5 (lower is better) Translates to: QEKSTNTPLTVFRPVHTRAFSPL*LISLSA Trigger: AGCTGACAAAGAAATCAACAAAAGTGGTGAAAAAGC...CCTTGTATGAACTGGTCTAAAGACTGTTAGTGGGGTGTTAGTTGATTTTTCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS TCA 90 bp | CAAAATTTTTCCGGAACTCAGAGTAAATTTGGTCATCTACTTTGGTaGGTTTCAGGAACTGTGGGTCAACTGATGAAATCAGCTTGTAAT | + |
Preference number: 5 (lower is better) Translates to: QNFSGTQSKFGHLLW*VSGTVGQLMKSACN Trigger: ATTACAAGCTGATTTCATCAGTTGACCCACAGTTCCTGAAACTCACCAAAGTAGATGACCAAATTTACTCTGAGTTCCGGAAAAATTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | CAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAAGAACTCAGAGTAAATTaGGTCATCTACTTTGGTGAG | + |
Preference number: 5 (lower is better) Translates to: QISYLTSSVSQETVYQEKELRVN*VIYFGE Trigger: CTCACCAAAGTAGATGACCAAATTTACTCTGAGTTC...TTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | GTTAGACTAGAAAGATGTCCTTCTGCGTATCCTTCAATTGTACAAGAATTTACATTCAATGGCAAAGAATaGTATCCTGGGGGCAAAGAT | + |
Preference number: 5 (lower is better) Translates to: VRLERCPSAYPSIVQEFTFNGKE*YPGGKD Trigger: ATCTTTGCCCCCAGGATACAATTCTTTGCCATTGAA...TGTAAATTCTTGTACAATTGAAGGATACGCAGAAGGACATCTTTCTAGTCTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | TATTTACAAATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGCCTCCTTTGTCAGTTTaGTCTTCTCTGTTGATTCCT | + |
Preference number: 5 (lower is better) Translates to: YLQISYLTSSVSQETVYQPPLSV*SSLLIP Trigger: AGGAATCAACAGAGAAGACAAAACTGACAAAGGAGG...CTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAATTTGTAAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | GTTAGACTAGAAAGATGTCCTTCTGCGTATCCTTCAATTGTACAAGAATTTACAATTTGGTCATCTACTTaGGTGAGTTTCAGGAACTGT | + |
Preference number: 5 (lower is better) Translates to: VRLERCPSAYPSIVQEFTIWSST*VSFRNC Trigger: ACAGTTCCTGAAACTCACCAAAGTAGATGACCAAAT...TGTAAATTCTTGTACAATTGAAGGATACGCAGAAGGACATCTTTCTAGTCTAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS-3UTR CAA 90 bp | ATTTCTTACTTGACCAGTAGTGTCAGCCAAGAAACAGTATACCAGGAAAAATCAGCTTTTTCACCACTTTaGTTGATTTCTTTGTCAGCT | + |
Preference number: 5 (lower is better) Translates to: ISYLTSSVSQETVYQEKSAFSPL*LISLSA Trigger: AGCTGACAAAGAAATCAACAAAAGTGGTGAAAAAGC...TGATTTTTCCTGGTATACTGTTTCTTGGCTGACACTACTGGTCAAGTAAGAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS CCA 72 bp | CCACTGGTGGCCGCCATCTTGCAACCCCCGAAAGCGTaGCTCCTTCCGCAGCTGATTGGAAAGCTGAGCCGG | + |
Preference number: 6 (lower is better) Translates to: PLVAAILQPPKA*LLPQLIGKLSR Trigger: CCGGCTCAGCTTTCCAATCAGCTGCGGAAGGAGCCACGCTTTCGGGGGTTGCAAGATGGCGGCCACCAGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS CCA 72 bp | ACACCAACTCCCCGGAAACCGGCTCATCAGTTCCACTaGTGGCCGCCATCTTGCAACCCCCGAAAGCGTGGC | + |
Preference number: 6 (lower is better) Translates to: TPTPRKPAHQFH*WPPSCNPRKRG Trigger: GCCACGCTTTCGGGGGTTGCAAGATGGCGGCCACCAGTGGAACTGATGAGCCGGTTTCCGGGGAGTTGGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS CAA 72 bp | GAAACCGGCTCATCAGTTCCACTGGTGGCCGCCATCTaGCAACCCCCGAAAGCGTGGCTCCTTCCGCAGCTG | + |
Preference number: 6 (lower is better) Translates to: ETGSSVPLVAAI*QPPKAWLLPQL Trigger: CAGCTGCGGAAGGAGCCACGCTTTCGGGGGTTGCAAGATGGCGGCCACCAGTGGAACTGATGAGCCGGTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS CAA 90 bp | AACTCCCCGGAAACCGGCTCATCAGTTCCACTGGTGGCCGCCATCTaGCAACCCCCGAAAGCGTGGCTCCTTCCGCAGCTGATTGGAAAG | + |
Preference number: 6 (lower is better) Translates to: NSPETGSSVPLVAAI*QPPKAWLLPQLIGK Trigger: CTTTCCAATCAGCTGCGGAAGGAGCCACGCTTTCGGGGGTTGCAAGATGGCGGCCACCAGTGGAACTGATGAGCCGGTTTCCGGGGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS GCA 72 bp | GTTGCCATACGACTCTGCTGGGAGAGAAAGCGCATGTaGCACAGACACCAACTCCCCGGAAACCGGCTCATC | + |
Preference number: 6 (lower is better) Translates to: VAIRLCWERKRM*HRHQLPGNRLI Trigger: GATGAGCCGGTTTCCGGGGAGTTGGTGTCTGTGGCACATGCGCTTTCTCTCCCAGCAGAGTCGTATGGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS CCA 72 bp | GCAACCCCCGAAAGCGTGGCTCCTTCCGCAGCTGATTaGAAAGCTGAGCCGGATCAGAGTCCTTCTCAACTG | + |
Preference number: 6 (lower is better) Translates to: ATPESVAPSAAD*KAEPDQSPSQL Trigger: CAGTTGAGAAGGACTCTGATCCGGCTCAGCTTTCCAATCAGCTGCGGAAGGAGCCACGCTTTCGGGGGTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS GCA 72 bp | AGCCATCTCAATGTCAGGATCGTTGCCATACGACTCTaGTGGGAGAGAAAGCGCATGTGCCACAGACACCAA | + |
Preference number: 6 (lower is better) Translates to: SHLNVRIVAIRL*WERKRMCHRHQ Trigger: TTGGTGTCTGTGGCACATGCGCTTTCTCTCCCAGCAGAGTCGTATGGCAACGATCCTGACATTGAGATGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS CCA 72 bp | CATCTCAATGTCAGGATCGTTGCCATACGACTCTGCTaGGAGAGAAAGCGCATGTGCCACAGACACCAACTC | + |
Preference number: 6 (lower is better) Translates to: HLNVRIVAIRLC*ERKRMCHRHQL Trigger: GAGTTGGTGTCTGTGGCACATGCGCTTTCTCTCCCAGCAGAGTCGTATGGCAACGATCCTGACATTGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS CAA 90 bp | GGTCAACTGATGAAATCAGCTTGTAATAGACTTCAGCATGCTGCATaGCTCTCATGGCCCAAGCCATCTCAATGTCAGGATCGTTGCCAT | + |
Preference number: 6 (lower is better) Translates to: GQLMKSACNRLQHAA*LSWPKPSQCQDRCH Trigger: ATGGCAACGATCCTGACATTGAGATGGCTTGGGCCATGAGAGCAATGCAGCATGCTGAAGTCTATTACAAGCTGATTTCATCAGTTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS CCA 72 bp | CTTTGTTATAGCCTTCCCGGTTCCGAGCAATTTCAATaGCAAAGAATTGTATCCTGGGGGCAAAGATGGTGT | + |
Preference number: 6 (lower is better) Translates to: LCYSLPGSEQFQ*QRIVSWGQRWC Trigger: ACACCATCTTTGCCCCCAGGATACAATTCTTTGCCATTGAAATTGCTCGGAACCGGGAAGGCTATAACAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373358.8 |
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CDS CAA 72 bp | ATGAAATCAGCTTGTAATAGACTTCAGCATGCTGCATaGCTCTCATGGCCCAAGCCATCTCAATGTCAGGAT | + |
Preference number: 6 (lower is better) Translates to: MKSACNRLQHAA*LSWPKPSQCQD Trigger: ATCCTGACATTGAGATGGCTTGGGCCATGAGAGCAATGCAGCATGCTGAAGTCTATTACAAGCTGATTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS TCA 72 bp | TCCGGAACTCAGAGTAAATTTGGTCATCTACTTTGGTaGGTTTCAGGAACTGTGGGTCAACTGATGAAATCA | + |
Preference number: 6 (lower is better) Translates to: SGTQSKFGHLLW*VSGTVGQLMKS Trigger: TGATTTCATCAGTTGACCCACAGTTCCTGAAACTCACCAAAGTAGATGACCAAATTTACTCTGAGTTCCGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |
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CDS CAA 90 bp | ATTTCTTTGTCAGCTTCTTTCCCTTTTTCTCCTCCTTTGTCAGTTTaGTCTTCTCTGTTGATTCCTTCCTCTTTTTCTTCTCCACTATCA | + |
Preference number: 6 (lower is better) Translates to: ISLSASFPFSPPLSV*SSLLIPSSFSSPLS Trigger: TGATAGTGGAGAAGAAAAAGAGGAAGGAATCAACAGAGAAGACAAAACTGACAAAGGAGGAGAAAAAGGGAAAGAAGCTGACAAAGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000373357.3 ENST00000373358.8 |