Pregenerated sensors for PAXX (Homo sapiens)
Ensembl gene IDs: ENSG00000148362Ensembl transcript IDs: ENST00000371620.4, ENST00000463765.1, ENST00000467845.5, ENST00000481187.5, ENST00000483807.5, ENST00000492564.2, ENST00000493968.5, ENST00000498095.4
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGTGGGGGCCTCAAAGACTaGCTCTCCCCTCATAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: GRNLRSRVSPGPGQAGGGGGLKD*LSPHRR Trigger: CCGCCTATGAGGGGAGAGGCAGTCTTTGAGGCCCCC...ACCTCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR CCA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGATCAGCGCCCGCAGCCTaGGGGCTGCCTCTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGSAPAA*GLPLGL Trigger: CAGGCCCAGAGGCAGCCCCCAGGCTGCGGGCGCTGA...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR TCA 90 bp | GGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGTCGGTCACGTAGAGGTTaGAGCCGCCGCGGTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GRNLRSRVSPGPGQAGGGRSRRG*SRRGPP Trigger: AGGGGGACCGCGGCGGCTTCAACCTCTACGTGACCG...ACCTCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR GCA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGACCGCAGCCTGGGGGCTaGCTCTGGGCCTGGTACCTT | + |
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Preference number: 4 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGPQPGG*LWAWYL Trigger: AAGGTACCAGGCCCAGAGGCAGCCCCCAGGCTGCGG...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR TCA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGATCTGGTAAGAAGAGCTaGGGCCCTGCAGGCCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGSGKKS*GPAGRG Trigger: CCCCCGGCCTGCAGGGCCTCAGCTCTTCTTACCAGA...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR TCA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGACCAGGCTGTCCGGCGTaGAGCAGGTGCTCCAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGPGCPA*SRCSKA Trigger: AGCTTTGGAGCACCTGCTTCACGCCGGACAGCCTGG...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR GCA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGCTCCACACGCGTTTTaGCAGGCCCAGTGTCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGAPHAF*QAQCQR Trigger: GCGCTGACACTGGGCCTGGCAAAACGCGTGTGGAGC...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR TCA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGCTCTTCCTCGGGCTaGCAGCTGTCTCTTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGGSSSG*QLSLLQ Trigger: CTGCAGAAGAGACAGCTGTCAGCCCGAGGAAGAGCC...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR GCA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGCGGGGCCACGCTTGTaGTGCACCTTCAGGTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGAGPRL*CTFRSH Trigger: ATGAGACCTGAAGGTGCAGCACAAGCGTGGCCCCGC...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR CCA 90 bp | GGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGTCCAGGGCCACCTCTCTaGGGATCTGGGTCTGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: GRNLRSRVSPGPGQAGGGPGPPL*GSGSGK Trigger: CTTACCAGACCCAGATCCCCAGAGAGGTGGCCCTGG...ACCTCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR CCA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGATGAGCGACTCTCCTaGACACCGCCTCCTGACTCC | + |
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Preference number: 4 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGDERLS*TPPPDS Trigger: GGAGTCAGGAGGCGGTGTCCAGGAGAGTCGCTCATC...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR GCA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGGCCACGCTTGTGCTaGACCTTCAGGTCTCATCGA | + |
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Preference number: 4 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGGPRLC*TFRSHR Trigger: TCGATGAGACCTGAAGGTGCAGCACAAGCGTGGCCC...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR CCA 90 bp | GGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGTCTGGGCCTGGTACCTTaGAGAGGTCAAAGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GRNLRSRVSPGPGQAGGGLGLVP*RGQRPV Trigger: CACTGGCCTTTGACCTCTCCAAGGTACCAGGCCCAG...ACCTCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR CCA 90 bp | GGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGTGGCTGCCTCTGGGCCTaGTACCTTGGAGAGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: GRNLRSRVSPGPGQAGGGGCLWA*YLGEVK Trigger: TTTGACCTCTCCAAGGTACCAGGCCCAGAGGCAGCC...ACCTCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR GCA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGATGCTCTGTCCTCCTaGAGAGTCAGAGCCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGDALSS*RVRATA Trigger: AGCTGTGGCTCTGACTCTGCAGGAGGACAGAGCATC...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR TCA 90 bp | GGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGTGACAGGGAAGGAATTTaGGGAGCCGTGTTAGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: GRNLRSRVSPGPGQAGGGDREGI*GAVLVL Trigger: CAGGACTAACACGGCTCCTCAAATTCCTTCCCTGTC...ACCTCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR CCA 90 bp | GGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGTGTCCACGCCACCAGCTaGTTTCTTACTCTTGAACCC | + |
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Preference number: 4 (lower is better) Translates to: GRNLRSRVSPGPGQAGGGVHATS*FLTLEP Trigger: GGGTTCAAGAGTAAGAAACCAGCTGGTGGCGTGGAC...ACCTCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS TCA 90 bp | CCAGACCCGCCCAGTTACCCACGAGGGCCGCCAGGCTGTCCGGCGTaGAGCAGGTGCTCCAAAGCTCCGCGGCGTCGGTCACGCTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: PDPPSYPRGPPGCPA*SRCSKAPRRRSRWG Trigger: CCCCCAGCGTGACCGACGCCGCGGAGCTTTGGAGCACCTGCTTCACGCCGGACAGCCTGGCGGCCCTCGTGGGTAACTGGGCGGGTCTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481187.5 |
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| CDS TCA 90 bp | CCAGACCCGCCCAGTTACCCACGAGGGCCGCCAGGCTGTCCGGCGTaGAGCAGGTGCTCCAAAGCTCCGCGGCGTCGGTCACGTAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: PDPPSYPRGPPGCPA*SRCSKAPRRRSRRG Trigger: ACCTCTACGTGACCGACGCCGCGGAGCTTTGGAGCACCTGCTTCACGCCGGACAGCCTGGCGGCCCTCGTGGGTAACTGGGCGGGTCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000493968.5 ENST00000498095.4 |
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| CDS TCA 90 bp | GTAAGAAGAGCTGAGGCCCTGCAGGCCGGGGGCTCTTCCTCGGGCTaGCAGCTGTCTCTTCTGCAGCTGCCAGTCGCCGCTCCAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VRRAEALQAGGSSSG*QLSLLQLPVAAPGS Trigger: GGAGCCTGGAGCGGCGACTGGCAGCTGCAGAAGAGACAGCTGTCAGCCCGAGGAAGAGCCCCCGGCCTGCAGGGCCTCAGCTCTTCTTAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000371620.4 ENST00000467845.5 ENST00000481187.5 ENST00000483807.5 ENST00000493968.5 ENST00000498095.4 |
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| CDS CCA 90 bp | AGATGTCTGTCGCCCCATAGACGATCTGCACTGCAAGGAGGGGTGTaGCGGCTCCCAGACCCGCCCAGTTACCCACGAGGGCCGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RCLSPHRRSALQGGV*RLPDPPSYPRGPPG Trigger: GCCTGGCGGCCCTCGTGGGTAACTGGGCGGGTCTGGGAGCCGCCACACCCCTCCTTGCAGTGCAGATCGTCTATGGGGCGACAGACATCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000481187.5 ENST00000493968.5 ENST00000498095.4 |
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| CDS CCA 90 bp | CACTGGGGGCACCCGAAACCTGCCCGACCCCAGAGCCCTAGCCAATaGGAGGACTACAGCTACAGGGCGGGCAGAGGGTGTCAGAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: HWGHPKPARPQSPSQ*EDYSYRAGRGCQSL Trigger: AAGGCTCTGACACCCTCTGCCCGCCCTGTAGCTGTAGTCCTCCCATTGGCTAGGGCTCTGGGGTCGGGCAGGTTTCGGGTGCCCCCAGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000481187.5 ENST00000492564.2 ENST00000493968.5 ENST00000498095.4 |
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| CDS-3UTR CAA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGACCCGCGGGGCCACGCTaGTGCTGCACCTTCAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGPAGPR*CCTFRS Trigger: AGACCTGAAGGTGCAGCACAAGCGTGGCCCCGCGGG...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR CAA 90 bp | GGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGTAGGCCAAAACGGGCTTaGAGGGCCGCCAGGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: GRNLRSRVSPGPGQAGGGRPKRA*RAARLS Trigger: GGACAGCCTGGCGGCCCTCAAAGCCCGTTTTGGCCT...ACCTCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR CAA 90 bp | GGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGTGGCTCCACACGCGTTTaGCCAGGCCCAGTGTCAGCG | + |
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Preference number: 5 (lower is better) Translates to: GRNLRSRVSPGPGQAGGGGSTRV*PGPVSA Trigger: CGCTGACACTGGGCCTGGCAAAACGCGTGTGGAGCC...ACCTCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS CCA 90 bp | GGGAGGACTACAGCTACAGGGCGGGCAGAGGGTGTCAGAGCCTTCTaGGGAATCCCAGATGTCTGTCGCCCCATAGACGATCTGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: GRTTATGRAEGVRAF*GIPDVCRPIDDLHC Trigger: GCAGTGCAGATCGTCTATGGGGCGACAGACATCTGGGATTCCCCAGAAGGCTCTGACACCCTCTGCCCGCCCTGTAGCTGTAGTCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000481187.5 ENST00000493968.5 ENST00000498095.4 |
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| CDS-3UTR CAA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAAGTCAGAGCCACAGCTaGCTGCTCACAGGCTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGSQSHS*LLTGCP Trigger: AGGGCAGCCTGTGAGCAGCAAGCTGTGGCTCTGACT...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR CAA 90 bp | GGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGTTCTGGGCCTGGTACCTaGGAGAGGTCAAAGGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GRNLRSRVSPGPGQAGGGSGPGT*ERSKAS Trigger: ACTGGCCTTTGACCTCTCCAAGGTACCAGGCCCAGA...ACCTCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR CAA 90 bp | GGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGGTCTCTTGAACCCGGGGTaGATGAGCGACTCTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GRNLRSRVSPGPGQAGGGLLNPG*MSDSPG Trigger: TCCAGGAGAGTCGCTCATCAACCCCGGGTTCAAGAG...ACCTCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS-3UTR CAA 90 bp | CAGGGAAGGAATTTGAGGAGCCGTGTTAGTCCTGGCCCAGGACAGGCAGGTGGAGCTGGTTTCTTACTCTaGAACCCGGGGTTGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: QGRNLRSRVSPGPGQAGGAGFLL*NPGLMS Trigger: GCTCATCAACCCCGGGTTCAAGAGTAAGAAACCAGC...TCCACCTGCCTGTCCTGGGCCAGGACTAACACGGCTCCTCAAATTCCTTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371620.4 |
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| CDS CCA 72 bp | AGCAGGTGCTCCAAAGCTCCGCGGCGTCGGTCACGCTaGGGGAGAAGGCCTGTCAGGCGGGGCCGCCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: SRCSKAPRRRSR*GRRPVRRGRPR Trigger: CCGCGGGCGGCCCCGCCTGACAGGCCTTCTCCCCCAGCGTGACCGACGCCGCGGAGCTTTGGAGCACCTGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481187.5 |
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| CDS CCA 72 bp | GGGCTTGTCACGAGCTGCCTGGAACCCGAGGCCCACTaGGGGCACCCGAAACCTGCCCGACCCCAGAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GLVTSCLEPEAH*GHPKPARPQSP Trigger: AGGGCTCTGGGGTCGGGCAGGTTTCGGGTGCCCCCAGTGGGCCTCGGGTTCCAGGCAGCTCGTGACAAGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000481187.5 ENST00000492564.2 ENST00000493968.5 ENST00000498095.4 |
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| CDS TCA 72 bp | CCCAGTTACCCACGAGGGCCGCCAGGCTGTCCGGCGTaGAGCAGGTGCTCCAAAGCTCCGCGGCGTCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PSYPRGPPGCPA*SRCSKAPRRRS Trigger: TGACCGACGCCGCGGAGCTTTGGAGCACCTGCTTCACGCCGGACAGCCTGGCGGCCCTCGTGGGTAACTGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000481187.5 ENST00000493968.5 ENST00000498095.4 |
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| CDS CCA 72 bp | TCGCCCCATAGACGATCTGCACTGCAAGGAGGGGTGTaGCGGCTCCCAGACCCGCCCAGTTACCCACGAGGG | + |
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Preference number: 6 (lower is better) Translates to: SPHRRSALQGGV*RLPDPPSYPRG Trigger: CCCTCGTGGGTAACTGGGCGGGTCTGGGAGCCGCCACACCCCTCCTTGCAGTGCAGATCGTCTATGGGGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000481187.5 ENST00000493968.5 ENST00000498095.4 |
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| CDS GCA 72 bp | CTCATAGGCGGACTCCCCGCGGGGCCACGCTTGTGCTaGACCTTCAGGTCTCATCGAAGTCCACGCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: LIGGLPAGPRLC*TFRSHRSPRHQ Trigger: CTGGTGGCGTGGACTTCGATGAGACCTGAAGGTGCAGCACAAGCGTGGCCCCGCGGGGAGTCCGCCTATGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000371620.4 ENST00000463765.1 ENST00000467845.5 ENST00000483807.5 ENST00000492564.2 ENST00000493968.5 ENST00000498095.4 |
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| CDS CCA 72 bp | CACCCGAAACCTGCCCGACCCCAGAGCCCTAGCCAATaGGAGGACTACAGCTACAGGGCGGGCAGAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: HPKPARPQSPSQ*EDYSYRAGRGC Trigger: ACACCCTCTGCCCGCCCTGTAGCTGTAGTCCTCCCATTGGCTAGGGCTCTGGGGTCGGGCAGGTTTCGGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000481187.5 ENST00000492564.2 ENST00000493968.5 ENST00000498095.4 |
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| CDS CAA 72 bp | TCAGGCCAAAACGGGCTTTCTAGAGAGCACAGGGGCTaGTCACGAGCTGCCTGGAACCCGAGGCCCACTGGG | + |
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Preference number: 6 (lower is better) Translates to: SGQNGLSREHRG*SRAAWNPRPTG Trigger: CCCAGTGGGCCTCGGGTTCCAGGCAGCTCGTGACAAGCCCCTGTGCTCTCTAGAAAGCCCGTTTTGGCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000481187.5 ENST00000492564.2 ENST00000493968.5 ENST00000498095.4 |
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| CDS CCA 72 bp | ACAGCTACAGGGCGGGCAGAGGGTGTCAGAGCCTTCTaGGGAATCCCAGATGTCTGTCGCCCCATAGACGAT | + |
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Preference number: 6 (lower is better) Translates to: TATGRAEGVRAF*GIPDVCRPIDD Trigger: ATCGTCTATGGGGCGACAGACATCTGGGATTCCCCAGAAGGCTCTGACACCCTCTGCCCGCCCTGTAGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000481187.5 ENST00000493968.5 ENST00000498095.4 |
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| CDS CAA 72 bp | ACGCCACCAGCTGGTTTCTTACTCTTGAACCCGGGGTaGATGAGCGACTCTCCTGGACACCGCCTCCTGACT | + |
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Preference number: 6 (lower is better) Translates to: TPPAGFLLLNPG*MSDSPGHRLLT Trigger: AGTCAGGAGGCGGTGTCCAGGAGAGTCGCTCATCAACCCCGGGTTCAAGAGTAAGAAACCAGCTGGTGGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000371620.4 ENST00000463765.1 ENST00000467845.5 ENST00000483807.5 ENST00000492564.2 ENST00000493968.5 ENST00000498095.4 |
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| CDS TCA 72 bp | GAAACTGAGTTCCAGGTTAAAGAGCACAGCCCTACTTaGGTCACAGGCGGACATGCCTTACCTGGTAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: ETEFQVKEHSPT*VTGGHALPGKK Trigger: CTTCTTACCAGGTAAGGCATGTCCGCCTGTGACTCAAGTAGGGCTGTGCTCTTTAACCTGGAACTCAGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463765.1 |
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