RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PATZ1 (Homo sapiens)

Ensembl gene IDs: ENSG00000100105

Ensembl transcript IDs: ENST00000215919.3, ENST00000266269.10, ENST00000351933.8, ENST00000405309.7, ENST00000465287.1, ENST00000494109.1

Found 677 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCAAGCAGGGCTCAGAAAGGTCTGGAGCCCTCCAGGCAGAGGGCTaGGCTCAGGGGGCTCTTGGAGGACACTCACCCCATGGTCCATGG +
Preference number: 1 (lower is better)
Translates to: SKQGSERSGALQAEG*AQGALGGHSPHGPW
Trigger: CCATGGACCATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCTCAGCCCTCTGCCTGGAGGGCTCCAGACCTTTCTGAGCCCTGCTTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CCA 90 bp TTCCAGAAAGGTGCTCCTTGCTACCCCCATTTGGGGGCTCTGACATaGGAAAGACTCCGAGTCACCCAGGGAGGAGCTGGGCATGCTGGG +
Preference number: 1 (lower is better)
Translates to: FQKGAPCYPHLGALT*ERLRVTQGGAGHAG
Trigger: CCCAGCATGCCCAGCTCCTCCCTGGGTGACTCGGAGTCTTTCCCATGTCAGAGCCCCCAAATGGGGGTAGCAAGGAGCACCTTTCTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR CCA 90 bp AGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTaGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGTGGCCAGGCC +
Preference number: 1 (lower is better)
Translates to: RAAWVDSSWNCASLL*RPTHSWSGERGGQA
Trigger: GGCCTGGCCACCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR CCA 90 bp CCGCATTCACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTaGGGACACAGCAGCTGCCTCATTTCCCTTCAGGCCCCATGGGCT +
Preference number: 1 (lower is better)
Translates to: PHSQHFPAVPRWLFP*GHSSCLISLQAPWA
Trigger: AGCCCATGGGGCCTGAAGGGAAATGAGGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGTGAATGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR GCA 90 bp GTGGGGACACAGCAGCTGCCTCATTTCCCTTCAGGCCCCATGGGCTaGTGGTCAACCTCAGGATCTACTAAAGATGACGCAAATGCCGAC +
Preference number: 1 (lower is better)
Translates to: VGTQQLPHFPSGPMG*WSTSGSTKDDANAD
Trigger: GTCGGCATTTGCGTCATCTTTAGTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAATGAGGCAGCTGCTGTGTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR GCA 90 bp TTTTTGGGGACTGCCATGTCGCAGGAGAAAGAGCCATTGGCACTCTaGTTCTCTGGCGTCTTCAGGTCGCTGGCATCTGAGAGGTCACCA +
Preference number: 1 (lower is better)
Translates to: FLGTAMSQEKEPLAL*FSGVFRSLASERSP
Trigger: TGGTGACCTCTCAGATGCCAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTCTTTCTCCTGCGACATGGCAGTCCCCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR CCA 90 bp AGATCTGAGTGGGAAGGGCAGAGGGCAGCATGGGTTGACTCTAGTTaGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGT +
Preference number: 1 (lower is better)
Translates to: RSEWEGQRAAWVDSS*NCASLLWRPTHSWS
Trigger: ACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCTCTGCCCTTCCCACTCAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR CCA 90 bp CATCACTTCCCTCCGCATTCACAGCATTTCCCAGCAGTCCCCAGATaGTTGTTTCCGTGGGGACACAGCAGCTGCCTCATTTCCCTTCAG +
Preference number: 1 (lower is better)
Translates to: HHFPPHSQHFPAVPR*LFPWGHSSCLISLQ
Trigger: CTGAAGGGAAATGAGGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGTGAATGCGGAGGGAAGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR CCA 90 bp TTTCCGTGGGGACACAGCAGCTGCCTCATTTCCCTTCAGGCCCCATaGGCTGCTGGTCAACCTCAGGATCTACTAAAGATGACGCAAATG +
Preference number: 1 (lower is better)
Translates to: FPWGHSSCLISLQAP*AAGQPQDLLKMTQM
Trigger: CATTTGCGTCATCTTTAGTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAATGAGGCAGCTGCTGTGTCCCCACGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR CCA 90 bp ATGAAAGCAGGATCTAGATCTGAGTGGGAAGGGCAGAGGGCAGCATaGGTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCG +
Preference number: 1 (lower is better)
Translates to: MKAGSRSEWEGQRAA*VDSSWNCASLLWRP
Trigger: CGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCTCTGCCCTTCCCACTCAGATCTAGATCCTGCTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR GCA 90 bp TACAGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTaGTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGCC +
Preference number: 1 (lower is better)
Translates to: YSLIRSIHITRSTWA*SHVTQLRYTMSLPA
Trigger: GGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR GCA 90 bp AGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGTTTTCTaGCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATAT +
Preference number: 1 (lower is better)
Translates to: RNWDWFCLGGLCSVF*PCPIPSLIDISAEY
Trigger: ATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CAA 90 bp AAAGGTCTGGAGCCCTCCAGGCAGAGGGCTGAGCTCAGGGGGCTCTaGGAGGACACTCACCCCATGGTCCATGGGATGCTTCTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: KGLEPSRQRAELRGL*EDTHPMVHGMLLAS
Trigger: GGAAGCCAGAAGCATCCCATGGACCATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCTCAGCCCTCTGCCTGGAGGGCTCCAGACCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CAA 90 bp CACTTCCCTCCGCATTCACAGCATTTCCCAGCAGTCCCCAGATGGTaGTTTCCGTGGGGACACAGCAGCTGCCTCATTTCCCTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: HFPPHSQHFPAVPRW*FPWGHSSCLISLQA
Trigger: GGCCTGAAGGGAAATGAGGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGTGAATGCGGAGGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR TCA 90 bp TGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGCCCATTTGGGGGCTCTaGCATGGGAAAGACTCCGAG +
Preference number: 2 (lower is better)
Translates to: WNCASLLWRPTHSWSGERPIWGL*HGKDSE
Trigger: CTCGGAGTCTTTCCCATGTCAGAGCCCCCAAATGGG...CCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR-3UTR TCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTTATGGGAAGGGAGGATaGCGAACTAGAGAAGTGGGA +
Preference number: 2 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPYGKGG*RTREVG
Trigger: TCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCATA...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp GAGCTTGTCCTAGCAGTGAAAATGCTCGCCTCCAAGCAGGGCTCAGAAAGGTCTTCCCTTCAGGCCCCATaGGCTGCTGGTCAACCTCAG +
Preference number: 2 (lower is better)
Translates to: ELVLAVKMLASKQGSERSSLQAP*AAGQPQ
Trigger: CTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGA...AGACCTTTCTGAGCCCTGCTTGGAGGCGAGCATTTTCACTGCTAGGACAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR TCA 90 bp GAGCTTGTCCTAGCAGTGAAAATGCTCGCCTCCAAGCAGGGCTCAGAAAGGTCTCAGGTCGCTGGCATCTaGGAGGTCACCATAGGAGTC +
Preference number: 2 (lower is better)
Translates to: ELVLAVKMLASKQGSERSQVAGI*EVTIGV
Trigger: GACTCCTATGGTGACCTCTCAGATGCCAGCGACCTG...AGACCTTTCTGAGCCCTGCTTGGAGGCGAGCATTTTCACTGCTAGGACAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR GCA 90 bp CATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCGAGCCATTGGCACTCTaGTTCTCTGGCGTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: HVTQLRYTMSLPAGCPTFEPLAL*FSGVFR
Trigger: CCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTC...GAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR GCA 90 bp TCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCCCGAGAGCCCGGACATaGACCTTCTGGATGTGTTTG +
Preference number: 2 (lower is better)
Translates to: SHVTQLRYTMSLPAGCPTPRART*TFWMCL
Trigger: CAAACACATCCAGAAGGTGCATGTCCGGGCTCTCGG...GGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR CAA 90 bp AAGCAGGATCTAGATCTGAGTGGGAAGGGCAGAGGGCAGCATGGGTaGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTC +
Preference number: 2 (lower is better)
Translates to: KQDLDLSGKGRGQHG*TLVGIVPVFSGGRL
Trigger: GAGTCGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCTCTGCCCTTCCCACTCAGATCTAGATCCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR-3UTR TCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTAACCCTAATGTGTaGCTGCGGTTTACAAAGAGC +
Preference number: 2 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPTNPNV*LRFTKS
Trigger: GCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGT...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR GCA 90 bp GTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGCAGAAAGGTGCTCCTTaGTACCCCCATTTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: VDSSWNCASLLWRPTHSWQKGAP*YPHLGA
Trigger: AGCCCCCAAATGGGGGTAGCAAGGAGCACCTTTCTG...CCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR-3UTR CCA 90 bp GAGCTTGTCCTAGCAGTGAAAATGCTCGCCTCCAAGCAGGGCTCAGAAAGGTCTTGGGAGAATGGGTGGTaGAGAAGGAGTTGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: ELVLAVKMLASKQGSERSWENGW*RRSWSG
Trigger: CCCACTCCAACTCCTTCTCCACCACCCATTCTCCCA...AGACCTTTCTGAGCCCTGCTTGGAGGCGAGCATTTTCACTGCTAGGACAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp GGACTTAGAGCGGAAGAAGCTCCCACATTCAGGGCATGGGTACTTCTTCTCCCCAGGAGAAAGAGCCATTaGCACTCTGCTTCTCTGGCG +
Preference number: 2 (lower is better)
Translates to: GLRAEEAPTFRAWVLLLPRRKSH*HSASLA
Trigger: CGCCAGAGAAGCAGAGTGCCAATGGCTCTTTCTCCT...GGGGAGAAGAAGTACCCATGCCCTGAATGTGGGAGCTTCTTCCGCTCTAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR TCA 90 bp CATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCGGGGTCACTAAGAATTaGGCACCAGGAATTCCAGCT +
Preference number: 2 (lower is better)
Translates to: HVTQLRYTMSLPAGCPTFGVTKN*APGIPA
Trigger: AGCTGGAATTCCTGGTGCTCAATTCTTAGTGACCCC...GAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR GCA 90 bp AGCCCAGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTGGGTCTCAGGCCAAATaGCCCTCCTGTTCCCTTCCA +
Preference number: 2 (lower is better)
Translates to: SPERNLDAIGGSRKVLLAGSQAK*PSCSLP
Trigger: TGGAAGGGAACAGGAGGGGCATTTGGCCTGAGACCC...AGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR-3UTR CCA 90 bp ACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTGGCGCTGTCCCACCTTCCTaGTTCCCAACAGCATTGAAA +
Preference number: 2 (lower is better)
Translates to: TFLVPNSIETPYFPDQTGAVPPS*FPTALK
Trigger: TTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGC...GCCAGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR TCA 90 bp GAGCTTGTCCTAGCAGTGAAAATGCTCGCCTCCAAGCAGGGCTCAGAAAGGTCTGGGGTCACTAAGAATTaGGCACCAGGAATTCCAGCT +
Preference number: 2 (lower is better)
Translates to: ELVLAVKMLASKQGSERSGVTKN*APGIPA
Trigger: AGCTGGAATTCCTGGTGCTCAATTCTTAGTGACCCC...AGACCTTTCTGAGCCCTGCTTGGAGGCGAGCATTTTCACTGCTAGGACAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR TCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACTCCAGGCAGAGGGCTaGGCTCAGGGGGCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLLQAEG*AQGALG
Trigger: TCCAAGAGCCCCCTGAGCTCAGCCCTCTGCCTGGAG...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR GCA 90 bp AAGCAGATAAGCTGGTGGCTAGTTCCCAGGAAGGCACCAACCTCCAAAATCACCGGGGTTCCAGAAAGGTaGTCCTTGCTACCCCCATTT +
Preference number: 2 (lower is better)
Translates to: KQISWWLVPRKAPTSKITGVPER*SLLPPF
Trigger: AAATGGGGGTAGCAAGGAGCACCTTTCTGGAACCCC...GGTGATTTTGGAGGTTGGTGCCTTCCTGGGAACTAGCCACCAGCTTATCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR-3UTR CCA 90 bp GAGCTTGTCCTAGCAGTGAAAATGCTCGCCTCCAAGCAGGGCTCAGAAAGGTCTCATTGGGAGAATGGGTaGTGGAGAAGGAGTTGGAGT +
Preference number: 2 (lower is better)
Translates to: ELVLAVKMLASKQGSERSHWENG*WRRSWS
Trigger: ACTCCAACTCCTTCTCCACCACCCATTCTCCCAATG...AGACCTTTCTGAGCCCTGCTTGGAGGCGAGCATTTTCACTGCTAGGACAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp GCTGCCTCATTTCCCTTCAGGCCCCATGGGCTGCTGGTCAACCTCAGGATCTACATTTCTAAAGACCATTaGGAGAATGGGTGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: AASFPFRPHGLLVNLRIYISKDH*ENGWWR
Trigger: TCTCCACCACCCATTCTCCCAATGGTCTTTAGAAAT...GTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAATGAGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR GCA 90 bp GGACTTAGAGCGGAAGAAGCTCCCACATTCAGGGCATGGGTACTTCTTCTCCCCTTTGTTTTTGGGGACTaGCATGTCGCAGGAGAAAGA +
Preference number: 2 (lower is better)
Translates to: GLRAEEAPTFRAWVLLLPFVFGD*HVAGER
Trigger: TCTTTCTCCTGCGACATGGCAGTCCCCAAAAACAAA...GGGGAGAAGAAGTACCCATGCCCTGAATGTGGGAGCTTCTTCCGCTCTAAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR CCA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTCCAGCAGTCCCCAGATaGTTGTTTCCGTGGGGACAC +
Preference number: 2 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGPAVPR*LFPWGH
Trigger: GTGTCCCCACGGAAACAACCATCTGGGGACTGCTGG...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp GAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGACCAGCAGTCCCCAGATaGTTGTTTCCGTGGGGACAC +
Preference number: 2 (lower is better)
Translates to: ELEKWEGTKITEVPEYHRPAVPR*LFPWGH
Trigger: GTGTCCCCACGGAAACAACCATCTGGGGACTGCTGG...TCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp ATGGGAAGGGAGGATGACGAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGAGACCATTGGGAGAATaGGTGGTGGAGAAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: MGREDDELEKWEGTKITERPLGE*VVEKEL
Trigger: CAACTCCTTCTCCACCACCCATTCTCCCAATGGTCT...CTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCAAGCTCAGGGGGCTCTTaGAGGACACTCACCCCATGG +
Preference number: 2 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSSSGGS*RTLTPW
Trigger: CCATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCT...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTCCCACATTCAGGGCATaGGTACTTCTTCTCCCCATC +
Preference number: 2 (lower is better)
Translates to: STWACSHVTQLRYTMSLPPTFRA*VLLLPI
Trigger: GATGGGGAGAAGAAGTACCCATGCCCTGAATGTGGG...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR GCA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACACAATGTCCCTACCTaGCGGCTGTCCCACCTTCCT +
Preference number: 2 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSHNVPT*RLSHLP
Trigger: AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTG...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTAAGACCATTGGGAGAATaGGTGGTGGAGAAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLRPLGE*VVEKEL
Trigger: CAACTCCTTCTCCACCACCCATTCTCCCAATGGTCT...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp CCCGAGAGCCCGGACATGCACCTTCTGGATGTGTTTGTTCAAGTAGGACTTAGAACTCCATTTTGTTTTTaGGGACTGCCATGTCGCAGG +
Preference number: 2 (lower is better)
Translates to: PESPDMHLLDVFVQVGLRTPFCF*GLPCRR
Trigger: CCTGCGACATGGCAGTCCCCAAAAACAAAATGGAGT...TCTAAGTCCTACTTGAACAAACACATCCAGAAGGTGCATGTCCGGGCTCTCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR TCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGCTCCAGGCAGAGGGCTaGGCTCAGGGGGCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: KQSLILTLMCDCGLQRALLQAEG*AQGALG
Trigger: TCCAAGAGCCCCCTGAGCTCAGCCCTCTGCCTGGAG...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATATGGGAGAATGGGTGGTaGAGAAGGAGTTGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGIWENGW*RRSWSG
Trigger: CCCACTCCAACTCCTTCTCCACCACCCATTCTCCCA...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGACGAACTAGAGAAGTaGGAGGGGACCAAAATCACT +
Preference number: 2 (lower is better)
Translates to: STWACSHVTQLRYTMSLPDELEK*EGTKIT
Trigger: AGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTC...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp TTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGAGGCACTCTGCTTCTCTaGCGTCTTCAGGTCGCTGGC +
Preference number: 2 (lower is better)
Translates to: FSAPVPYQVSLIFLQNIRGTLLL*RLQVAG
Trigger: GCCAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCC...TCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR TCA 90 bp AGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGTCCTAGGTGTCCTCAACAGCTaGGCTTGTCCTAGCAGTGAA +
Preference number: 2 (lower is better)
Translates to: SSVSPGIAFSSNSLQLVLGVLNS*ACPSSE
Trigger: TTCACTGCTAGGACAAGCTCAGCTGTTGAGGACACC...TAGGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR TCA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTAAAATCACGTAAGAACTaGAATTTGGGGTGGGGGTGT +
Preference number: 2 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLKSRKN*NLGWGC
Trigger: ACACCCCCACCCCAAATTTCAGTTCTTACGTGATTT...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp GAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGAAGACCATTGGGAGAATaGGTGGTGGAGAAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: ELEKWEGTKITEVPEYHRRPLGE*VVEKEL
Trigger: CAACTCCTTCTCCACCACCCATTCTCCCAATGGTCT...TCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAAAGCTCAGGGGGCTCTTaGAGGACACTCACCCCATGG +
Preference number: 2 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQSSGGS*RTLTPW
Trigger: CCATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCT...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTGCTCACATGTGGCTGTCCCACCTTCCTaGTTCCCAACAGCATTGAAA +
Preference number: 2 (lower is better)
Translates to: SLIRSIHITRSTWACSHVAVPPS*FPTALK
Trigger: TTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGC...CACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTAAGATGGTTGTTTCCGTaGGGACACAGCAGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLRWLFP*GHSSCL
Trigger: GAGGCAGCTGCTGTGTCCCCACGGAAACAACCATCT...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR CAA 90 bp ATACAGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTaGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGC +
Preference number: 2 (lower is better)
Translates to: IQSDQINSHHKVNLG*LTCDTTEVHNVPTC
Trigger: GCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR TCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTAGGTGTCCTCAACAGCTaGGCTTGTCCTAGCAGTGAA +
Preference number: 2 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLGVLNS*ACPSSE
Trigger: TTCACTGCTAGGACAAGCTCAGCTGTTGAGGACACC...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR GCA 90 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTGCTCACATGTGAACTGGGACTGGTTTTaGCTTGGAGGCCTATGTAGT +
Preference number: 2 (lower is better)
Translates to: SLIRSIHITRSTWACSHVNWDWF*LGGLCS
Trigger: ACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTT...CACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp CCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGAAAATCCCAGCAGTCCCCAGATaGTTGTTTCCGTGGGGACAC +
Preference number: 2 (lower is better)
Translates to: PCPIPSLIDISAEYQMKIPAVPR*LFPWGH
Trigger: GTGTCCCCACGGAAACAACCATCTGGGGACTGCTGG...GATTTTCATCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp GGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTCATTGGGAGAATGGGTaGTGGAGAAGGAGTTGGAGT +
Preference number: 2 (lower is better)
Translates to: GLCSVFCPCPIPSLIDISHWENG*WRRSWS
Trigger: ACTCCAACTCCTTCTCCACCACCCATTCTCCCAATG...AGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATACATTGGGAGAATGGGTaGTGGAGAAGGAGTTGGAGT +
Preference number: 2 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGIHWENG*WRRSWS
Trigger: ACTCCAACTCCTTCTCCACCACCCATTCTCCCAATG...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR TCA 90 bp ATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGTATGGGAAGGGAGGATaGCGAACTAGAGAAGTGGGA +
Preference number: 2 (lower is better)
Translates to: ITEVPEYHRFGYRIGVTKYGKGG*RTREVG
Trigger: TCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCATA...CTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR GCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTAAGGTCAACCTGGGCTTaGTCACATGTGACACAACTG +
Preference number: 2 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLRSTWA*SHVTQL
Trigger: CAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp AGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGTCCTAGACGAACTAGAGAAGTaGGAGGGGACCAAAATCACT +
Preference number: 2 (lower is better)
Translates to: SSVSPGIAFSSNSLQLVLDELEK*EGTKIT
Trigger: AGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTC...TAGGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CAA 90 bp CCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATaGGGGTCACTAAGAATTGAGCACCAGGAATTCCAGCTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: PKSLRSQNIIDLGIG*GSLRIEHQEFQLLP
Trigger: GGGAAGAAGCTGGAATTCCTGGTGCTCAATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR TCA 90 bp AGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGTCCTAAAATCACGTAAGAACTaGAATTTGGGGTGGGGGTGT +
Preference number: 2 (lower is better)
Translates to: SSVSPGIAFSSNSLQLVLKSRKN*NLGWGC
Trigger: ACACCCCCACCCCAAATTTCAGTTCTTACGTGATTT...TAGGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR TCA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCAACTAACCCTAATGTGTaGCTGCGGTTTACAAAGAGC +
Preference number: 2 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSTNPNV*LRFTKS
Trigger: GCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGT...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGTCACCCCATGGTCCATaGGATGCTTCTGGCTTCCTT +
Preference number: 2 (lower is better)
Translates to: KQSLILTLMCDCGLQRALSPHGP*DASGFL
Trigger: AAGGAAGCCAGAAGCATCCCATGGACCATGGGGTGA...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTCAACAGCATGTTGAATaGTTAAAATCACGTAAGAAC +
Preference number: 2 (lower is better)
Translates to: STWACSHVTQLRYTMSLPQQHVE*LKSRKN
Trigger: GTTCTTACGTGATTTTAACCATTCAACATGCTGTTG...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR TCA 90 bp CTAACATTTTTAATACAGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGTGTCCTCAACAGCTaGGCTTGTCCTAGCAGTGAA +
Preference number: 2 (lower is better)
Translates to: LTFLIQSDQINSHHKVNLGVLNS*ACPSSE
Trigger: TTCACTGCTAGGACAAGCTCAGCTGTTGAGGACACC...CAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACTGTATTAAAAATGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAAATCACAAGGTCAACCTaGGCTTGCTCACATGTGACA +
Preference number: 2 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQITRST*ACSHVT
Trigger: TGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR GCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGAACTGGGACTGGTTTTaGCTTGGAGGCCTATGTAGT +
Preference number: 2 (lower is better)
Translates to: KQSLILTLMCDCGLQRALNWDWF*LGGLCS
Trigger: ACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTT...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp ACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGAATATTTCTAAAGACCATTaGGAGAATGGGTGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: TEVPEYHRFGYRIGVTKNISKDH*ENGWWR
Trigger: TCTCCACCACCCATTCTCCCAATGGTCTTTAGAAAT...ATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCATTCCTTAAAAACAGTTaGGCATCCGCATTGTATAAG +
Preference number: 2 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSFLKNS*ASALYK
Trigger: CTTATACAATGCGGATGCCCAACTGTTTTTAAGGAA...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp AGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGTCCTATTCCTTAAAAACAGTTaGGCATCCGCATTGTATAAG +
Preference number: 2 (lower is better)
Translates to: SSVSPGIAFSSNSLQLVLFLKNS*ASALYK
Trigger: CTTATACAATGCGGATGCCCAACTGTTTTTAAGGAA...TAGGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTGACGAACTAGAGAAGTaGGAGGGGACCAAAATCACT +
Preference number: 2 (lower is better)
Translates to: SKQSLILTLMCDCGLQRADELEK*EGTKIT
Trigger: AGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTC...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTATTTCTAAAGACCATTaGGAGAATGGGTGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: SKQSLILTLMCDCGLQRAISKDH*ENGWWR
Trigger: TCTCCACCACCCATTCTCCCAATGGTCTTTAGAAAT...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CCA 72 bp GGTGCTCCTTGCTACCCCCATTTGGGGGCTCTGACATaGGAAAGACTCCGAGTCACCCAGGGAGGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: GAPCYPHLGALT*ERLRVTQGGAG
Trigger: CCCAGCTCCTCCCTGGGTGACTCGGAGTCTTTCCCATGTCAGAGCCCCCAAATGGGGGTAGCAAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR CCA 72 bp TGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTaGGGAAAGGGGTGGCCAGGCCCCAGTCTAGAAACC +
Preference number: 3 (lower is better)
Translates to: CQSSLEADSLVE*GKGWPGPSLET
Trigger: GGTTTCTAGACTGGGGCCTGGCCACCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR-3UTR CAA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGGCAGTCCCCAGATGGTaGTTTCCGTGGGGACACAGC +
Preference number: 3 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLAVPRW*FPWGHS
Trigger: GCTGTGTCCCCACGGAAACAACCATCTGGGGACTGC...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp ACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTGGCGAGCTCAGGGGGCTCTaGGAGGACACTCACCCCATG +
Preference number: 3 (lower is better)
Translates to: TFLVPNSIETPYFPDQTGELRGL*EDTHPM
Trigger: CATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCTC...GCCAGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp TGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGCCTTGCTACCCCCATTaGGGGGCTCTGACATGGGAA +
Preference number: 3 (lower is better)
Translates to: WNCASLLWRPTHSWSGERPCYPH*GALTWE
Trigger: TTCCCATGTCAGAGCCCCCAAATGGGGGTAGCAAGG...CCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR CCA 72 bp CAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTaGGGACACAGCAGCTGCCTCATTTCCCTTCAGGCC +
Preference number: 3 (lower is better)
Translates to: QHFPAVPRWLFP*GHSSCLISLQA
Trigger: GGCCTGAAGGGAAATGAGGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR CAA 90 bp ATGGGAAGGGAGGATGACGAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGAGCTCAGGGGGCTCTaGGAGGACACTCACCCCATG +
Preference number: 3 (lower is better)
Translates to: MGREDDELEKWEGTKITEELRGL*EDTHPM
Trigger: CATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCTC...CTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR GCA 72 bp ACTGCCATGTCGCAGGAGAAAGAGCCATTGGCACTCTaGTTCTCTGGCGTCTTCAGGTCGCTGGCATCTGAG +
Preference number: 3 (lower is better)
Translates to: TAMSQEKEPLAL*FSGVFRSLASE
Trigger: CTCAGATGCCAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTCTTTCTCCTGCGACATGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR CCA 72 bp ACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTaGTTCCCAACAGCATTGAAACCCCCTACTTCCCTG +
Preference number: 3 (lower is better)
Translates to: TQCPYLPAVPPS*FPTALKPPTSL
Trigger: CAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CCA 72 bp TTTTGGGGACTGCCATGTCGCAGGAGAAAGAGCCATTaGCACTCTGCTTCTCTGGCGTCTTCAGGTCGCTGG +
Preference number: 3 (lower is better)
Translates to: FWGLPCRRRKSH*HSASLASSGRW
Trigger: CCAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTCTTTCTCCTGCGACATGGCAGTCCCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR CCA 72 bp CCTCCGCATTCACAGCATTTCCCAGCAGTCCCCAGATaGTTGTTTCCGTGGGGACACAGCAGCTGCCTCATT +
Preference number: 3 (lower is better)
Translates to: PPHSQHFPAVPR*LFPWGHSSCLI
Trigger: AATGAGGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGTGAATGCGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR CCA 72 bp GGACACAGCAGCTGCCTCATTTCCCTTCAGGCCCCATaGGCTGCTGGTCAACCTCAGGATCTACTAAAGATG +
Preference number: 3 (lower is better)
Translates to: GHSSCLISLQAP*AAGQPQDLLKM
Trigger: CATCTTTAGTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAATGAGGCAGCTGCTGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR CAA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTGATTTGGGTATAGGATaGGGGTCACTAAGAATTGAG +
Preference number: 3 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPDLGIG*GSLRIE
Trigger: CTCAATTCTTAGTGACCCCAATCCTATACCCAAATC...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp AGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCCGATTTGGGTATAGGATaGGGGTCACTAAGAATTGAG +
Preference number: 3 (lower is better)
Translates to: SISQQSPDGCFRGDTAAADLGIG*GSLRIE
Trigger: CTCAATTCTTAGTGACCCCAATCCTATACCCAAATC...GGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAGAGCTCAGGGGGCTCTaGGAGGACACTCACCCCATG +
Preference number: 3 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGIELRGL*EDTHPM
Trigger: CATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCTC...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCAGCAGTCCCCAGATGGTaGTTTCCGTGGGGACACAGC +
Preference number: 3 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSAVPRW*FPWGHS
Trigger: GCTGTGTCCCCACGGAAACAACCATCTGGGGACTGC...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp CCCATGGGCTGCTGGTCAACCTCAGGATCTACTAAAGATGACGCAAATGCCGACCCATCAGACTCCATTTaGTTTTTGGGGACTGCCATG +
Preference number: 3 (lower is better)
Translates to: PMGCWSTSGSTKDDANADPSDSI*FLGTAM
Trigger: CATGGCAGTCCCCAAAAACAAAATGGAGTCTGATGG...GTCGGCATTTGCGTCATCTTTAGTAGATCCTGAGGTTGACCAGCAGCCCATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR CAA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTAGCAGTCCCCAGATGGTaGTTTCCGTGGGGACACAGC +
Preference number: 3 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLAVPRW*FPWGHS
Trigger: GCTGTGTCCCCACGGAAACAACCATCTGGGGACTGC...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CCA 72 bp GGACTTAGAGCGGAAGAAGCTCCCACATTCAGGGCATaGGTACTTCTTCTCCCCATCAGACTCCATTTTGTT +
Preference number: 3 (lower is better)
Translates to: GLRAEEAPTFRA*VLLLPIRLHFV
Trigger: AACAAAATGGAGTCTGATGGGGAGAAGAAGTACCCATGCCCTGAATGTGGGAGCTTCTTCCGCTCTAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
3UTR-3UTR CAA 90 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTGCTCACATGTGTGGTTCCCAACAGCATaGAAACCCCCTACTTCCCTG +
Preference number: 3 (lower is better)
Translates to: SLIRSIHITRSTWACSHVWFPTA*KPPTSL
Trigger: CAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCA...CACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR GCA 72 bp AAATTTTATCATCACTCCTGTTCACCCCGCAGAGTCTaGGGAGTGCTAAAGGGCACACCAATAAGGATCCGA +
Preference number: 3 (lower is better)
Translates to: KFYHHSCSPRRV*GVLKGTPIRIR
Trigger: TCGGATCCTTATTGGTGTGCCCTTTAGCACTCCGCAGACTCTGCGGGGTGAACAGGAGTGATGATAAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR CCA 72 bp AAGGATATGGGAAGGGAGGATGACGAACTAGAGAAGTaGGAGGGGACCAAAATCACTGAGGTCCCAGAATAT +
Preference number: 3 (lower is better)
Translates to: KDMGREDDELEK*EGTKITEVPEY
Trigger: ATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCATATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTGCTCACATGTGGGGACTGGTTTTGCCTaGGAGGCCTATGTAGTGTTT +
Preference number: 3 (lower is better)
Translates to: SLIRSIHITRSTWACSHVGTGFA*EAYVVF
Trigger: AAACACTACATAGGCCTCCAAGGCAAAACCAGTCCC...CACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp GAGCTTGTCCTAGCAGTGAAAATGCTCGCCTCCAAGCAGGGCTCAGAAAGGTCTCAGAATATCATAGATTaGGGTATAGGATTGGGGTCA +
Preference number: 3 (lower is better)
Translates to: ELVLAVKMLASKQGSERSQNIID*GIGLGS
Trigger: TGACCCCAATCCTATACCCAAATCTATGATATTCTG...AGACCTTTCTGAGCCCTGCTTGGAGGCGAGCATTTTCACTGCTAGGACAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp AGCCCCCAAAGCCATATATTGGGGTGGCCCAATATAAAGCTACTCATTAGTTTGAGCCCAGAAAGAAACTaGGATGCTATAGGGGGTTCC +
Preference number: 3 (lower is better)
Translates to: SPQSHILGWPNIKLLISLSPERN*DAIGGS
Trigger: GGAACCCCCTATAGCATCCAAGTTTCTTTCTGGGCT...CAAACTAATGAGTAGCTTTATATTGGGCCACCCCAATATATGGCTTTGGGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215919.3
3UTR-3UTR CAA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCAAAGGTCAACCTGGGCTaGCTCACATGTGACACAACT +
Preference number: 3 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSKVNLG*LTCDTT
Trigger: AGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTT...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp ATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGGGGACTGGTTTTGCCTaGGAGGCCTATGTAGTGTTT +
Preference number: 3 (lower is better)
Translates to: ITEVPEYHRFGYRIGVTKGTGFA*EAYVVF
Trigger: AAACACTACATAGGCCTCCAAGGCAAAACCAGTCCC...CTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACAGAATATCATAGATTaGGGTATAGGATTGGGGTCA +
Preference number: 3 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLQNIID*GIGLGS
Trigger: TGACCCCAATCCTATACCCAAATCTATGATATTCTG...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTAAAGGTCAACCTGGGCTaGCTCACATGTGACACAACT +
Preference number: 3 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLKVNLG*LTCDTT
Trigger: AGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTT...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR GCA 72 bp ATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTaGTCACATGTGACACAACTGAGGTACACAATGTCC +
Preference number: 3 (lower is better)
Translates to: IRSIHITRSTWA*SHVTQLRYTMS
Trigger: GGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CCA 72 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTaGGCTTGCTCACATGTGACACAACTGAGGTACACA +
Preference number: 3 (lower is better)
Translates to: SLIRSIHITRST*ACSHVTQLRYT
Trigger: TGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAAGATTTGGGTATAGGATaGGGGTCACTAAGAATTGAG +
Preference number: 3 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQDLGIG*GSLRIE
Trigger: CTCAATTCTTAGTGACCCCAATCCTATACCCAAATC...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR-3UTR CAA 90 bp ACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGAATCAGAATATCATAGATTaGGGTATAGGATTGGGGTCA +
Preference number: 3 (lower is better)
Translates to: TEVPEYHRFGYRIGVTKNQNIID*GIGLGS
Trigger: TGACCCCAATCCTATACCCAAATCTATGATATTCTG...ATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GGGGGCTCTGACATGGGAAAGACTCCGAGTCACCCAGGGAGGAGCTGGGCATGCAGGCTTGGCCTGCAATaGCTGCACCAGCCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: GGSDMGKTPSHPGRSWACRLGLQ*LHQPPE
Trigger: CTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCCT...GCATGCCCAGCTCCTCCCTGGGTGACTCGGAGTCTTTCCCATGTCAGAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR TCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTCCAGCTGGAGGCTGGTaGCACCGTGCTGGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPPAGGW*HRAGPR
Trigger: ACGAGGCCCAGCACGGTGTCACCAGCCTCCAGCTGG...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTCCGCCCTCGCTGGACTaGGCGCCACTCTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPPPSLD*APLSPL
Trigger: GAGAGGAGAGAGTGGCGCGCAGTCCAGCGAGGGCGG...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACAGCAGCTGCCTCATTTCCCTTCAGGCCCCATGGGCTGCTGGTCAACCTCAGGCCGCCCTCGCTGGACTaGGCGCCACTCTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: TAAASFPFRPHGLLVNLRPPSLD*APLSPL
Trigger: GAGAGGAGAGAGTGGCGCGCAGTCCAGCGAGGGCGG...CCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAATGAGGCAGCTGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR CCA 90 bp AGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCCCGTTCACCCGCTCCATaGCCGCCGCCCCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: SISQQSPDGCFRGDTAAARSPAP*PPPPPT
Trigger: AGTGGGAGGGGGCGGCGGCCATGGAGCGGGTGAACG...GGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GCTGCCTCATTTCCCTTCAGGCCCCATGGGCTGCTGGTCAACCTCAGGATCTACCGTTCACCCGCTCCATaGCCGCCGCCCCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: AASFPFRPHGLLVNLRIYRSPAP*PPPPPT
Trigger: AGTGGGAGGGGGCGGCGGCCATGGAGCGGGTGAACG...GTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAATGAGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR CCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTCACGGCGCGGTGCGCTaGGAAGCTCTCGTCGCCTAC +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPHGAVR*EALVAY
Trigger: GTAGGCGACGAGAGCTTCCCAGCGCACCGCGCCGTG...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GGGGGCTCTGACATGGGAAAGACTCCGAGTCACCCAGGGAGGAGCTGGGCATGCGCATGCTGCCGGCGATaGCATTGCTGTTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GGSDMGKTPSHPGRSWACACCRR*HCCWLP
Trigger: TGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGC...GCATGCCCAGCTCCTCCCTGGGTGACTCGGAGTCTTTCCCATGTCAGAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp GCTGCCTCATTTCCCTTCAGGCCCCATGGGCTGCTGGTCAACCTCAGGATCTACAGGCTGGTGACACCGTaGTGGGCCTCGTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: AASFPFRPHGLLVNLRIYRLVTP*WASCCR
Trigger: CCGGCAGCACGAGGCCCAGCACGGTGTCACCAGCCT...GTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAATGAGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR CCA 90 bp AGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCCCACGGCGCGGTGCGCTaGGAAGCTCTCGTCGCCTAC +
Preference number: 4 (lower is better)
Translates to: SISQQSPDGCFRGDTAAAHGAVR*EALVAY
Trigger: GTAGGCGACGAGAGCTTCCCAGCGCACCGCGCCGTG...GGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTGGCACCTTGTCTTCATaGCAGGCCAGGTGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPGTLSS*QARWER
Trigger: GCGCTCCCACCTGGCCTGTCATGAAGACAAGGTGCC...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GGGGGCTCTGACATGGGAAAGACTCCGAGTCACCCAGGGAGGAGCTGGGCATGCCCAAGCGCACCACGATaGGGGAAGTGTAGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: GGSDMGKTPSHPGRSWACPSAPR*GKCRRS
Trigger: ACTTCGCCTACACTTCCCGCATCGTGGTGCGCTTGG...GCATGCCCAGCTCCTCCCTGGGTGACTCGGAGTCTTTCCCATGTCAGAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp AGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCCGCCTCCTCCTCTGGCTaGATGCTGCCGGCGATGCCA +
Preference number: 4 (lower is better)
Translates to: SISQQSPDGCFRGDTAAAASSSG*MLPAMP
Trigger: TGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGC...GGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGCGGCAGGCCGCTGCTaGTCCCAACCCACACCTGAC +
Preference number: 4 (lower is better)
Translates to: WNCASLLWRPTHSWSGERAAGRC*SQPTPD
Trigger: GTCAGGTGTGGGTTGGGAGCAGCAGCGGCCTGCCGC...CCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp AGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGGGGGCGGCAGGCCGCTaGTGCTCCCAACCCACACCT +
Preference number: 4 (lower is better)
Translates to: RAAWVDSSWNCASLLWRPGAAGR*CSQPTP
Trigger: AGGTGTGGGTTGGGAGCAGCAGCGGCCTGCCGCCCC...CGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp TGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGGGTGGTCCAGCCCTaGCTCAGATATCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: WNCASLLWRPTHSWSGERGVVQP*LRYPGG
Trigger: CCCGCCGGGATATCTGAGGCAGGGCTGGACCACCCC...CCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGGAGGTGCGCCCCTCCTaGAAACGCGCCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLEVRPS*KRACHL
Trigger: GAGGTGGCAGGCGCGTTTGCAGGAGGGGCGCACCTC...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGTGAGGTGCGCCCCTCCTaGAAACGCGCCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: DTTEVHNVPTCRLSHLPGEVRPS*KRACHL
Trigger: GAGGTGGCAGGCGCGTTTGCAGGAGGGGCGCACCTC...ACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGTGGCCAGGCCAAGGCTGCCCCGTTaGTCATGTCCAAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PVFSGGRLTRGVGKGVARPRLPR*SCPKGS
Trigger: GCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGG...CCTGGCCACCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp AGTGATGCCAGGGGAAGGGAAGCAGATAAGCTGGTGGCTAGTTCCCAGGAAGGCGGGGTCCAGCCACCATaGGCAAGCGGTCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: SDARGREADKLVASSQEGGVQPP*ASGPPQ
Trigger: CTGGGGTGGACCGCTTGCCCATGGTGGCTGGACCCC...GCCTTCCTGGGAACTAGCCACCAGCTTATCTGCTTCCCTTCCCCTGGCATCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp AGTGATGCCAGGGGAAGGGAAGCAGATAAGCTGGTGGCTAGTTCCCAGGAAGGCCTGGTGACACCGTGCTaGGCCTCGTGCTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SDARGREADKLVASSQEGLVTPC*ASCCRS
Trigger: GCTCCGGCAGCACGAGGCCCAGCACGGTGTCACCAG...GCCTTCCTGGGAACTAGCCACCAGCTTATCTGCTTCCCTTCCCCTGGCATCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR TCA 90 bp CCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGTGGCCAGGTGGGGACCCAAACATTaGGTCCAGCAGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PVFSGGRLTRGVGKGVARWGPKH*VQQVGL
Trigger: AAGGCCAACCTGCTGGACTCAATGTTTGGGTCCCCA...CCTGGCCACCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp AGTGATGCCAGGGGAAGGGAAGCAGATAAGCTGGTGGCTAGTTCCCAGGAAGGCGCCTCCTCCTCTGGCTaGATGCTGCCGGCGATGCCA +
Preference number: 4 (lower is better)
Translates to: SDARGREADKLVASSQEGASSSG*MLPAMP
Trigger: TGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGC...GCCTTCCTGGGAACTAGCCACCAGCTTATCTGCTTCCCTTCCCCTGGCATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp GTCGCAGGAGAAAGAGCCATTGGCACTCTGCTTCTCTGGCGTCTTCAGGTCGCTTTGGCCTGCAATGGCTaGACCAGCCGCCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VAGERAIGTLLLWRLQVALACNG*TSRPSC
Trigger: GCAGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAA...AGCGACCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTCTTTCTCCTGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR GCA 90 bp CCAGGAAGGCACCAACCTCCAAAATCACCTAGGCAAGGACAGATGCCCAGGGGTGCATGGAAGGATGCCTaGCTCCCTCAGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGRHQPPKSPRQGQMPRGAWKDA*LPQAPW
Trigger: CCAGGGGGCCTGAGGGAGGCAGGCATCCTTCCATGC...ACCCCTGGGCATCTGTCCTTGCCTAGGTGATTTTGGAGGTTGGTGCCTTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGGCATGGAAGGATGCCTaGCTCCCTCAGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLAWKDA*LPQAPW
Trigger: CCAGGGGGCCTGAGGGAGGCAGGCATCCTTCCATGC...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGTGACCGCATGGAAGGATaGCTGCCTCCCTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: DTTEVHNVPTCRLSHLPGDRMEG*LPPSGP
Trigger: GGGGCCTGAGGGAGGCAGGCATCCTTCCATGCGGTC...ACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCGCGCGAGCGAAGAGGTaGGCCCCTCCTGCAAACGCG +
Preference number: 4 (lower is better)
Translates to: SHVTQLRYTMSLPAGCPTARAKR*APPANA
Trigger: CGCGTTTGCAGGAGGGGCGCACCTCTTCGCTCGCGC...GGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AAGGGCACACCAATAAGGATCCGAGGGAGGGGGTCTACATCTGCTTTTTCAGCCCGTTCACCCGCTCCATaGCCGCCGCCCCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: KGTPIRIRGRGSTSAFSARSPAP*PPPPPT
Trigger: AGTGGGAGGGGGCGGCGGCCATGGAGCGGGTGAACG...GGCTGAAAAAGCAGATGTAGACCCCCTCCCTCGGATCCTTATTGGTGTGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp AGTGATGCCAGGGGAAGGGAAGCAGATAAGCTGGTGGCTAGTTCCCAGGAAGGCCCGCCGTCGCCCAACTaGGCGCTGAACACCGACTCA +
Preference number: 4 (lower is better)
Translates to: SDARGREADKLVASSQEGPPSPN*ALNTDS
Trigger: TGAGTCGGTGTTCAGCGCCCAGTTGGGCGACGGCGG...GCCTTCCTGGGAACTAGCCACCAGCTTATCTGCTTCCCTTCCCCTGGCATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp GACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGTCCGCCGTCGCCCAACTaGGCGCTGAACACCGACTCA +
Preference number: 4 (lower is better)
Translates to: DTTEVHNVPTCRLSHLPGPPSPN*ALNTDS
Trigger: TGAGTCGGTGTTCAGCGCCCAGTTGGGCGACGGCGG...ACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGGGTCCAGCCACCATaGGCAAGCGGTCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPGVQPP*ASGPPQ
Trigger: CTGGGGTGGACCGCTTGCCCATGGTGGCTGGACCCC...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTCTGGTGACACCGTGCTaGGCCTCGTGCTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPLVTPC*ASCCRS
Trigger: GCTCCGGCAGCACGAGGCCCAGCACGGTGTCACCAG...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGGACTCACTCGTGGAGTaGGGAAAGGGGTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ELCQSSLEADSLVEWGKGDSLVE*GKGWPG
Trigger: GCCTGGCCACCCCTTTCCCCACTCCACGAGTGAGTC...CCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp GAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGAGGCCGACTCACTCGTaGAGTGGGGAAAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ELCQSSLEADSLVEWGKGRPTHS*SGERGG
Trigger: GCCACCCCTTTCCCCACTCCACGAGTGAGTCGGCCT...CCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTAGCTCAGGGGGCTCTTaGAGGACACTCACCCCATGG +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPSSGGS*RTLTPW
Trigger: CCATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCT...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTCGCCCAACTGGGCGCTaGACACCGACTCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPRPTGR*TPTQST
Trigger: AGTACTTTGAGTCGGTGTTCAGCGCCCAGTTGGGCG...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp AAGGGCACACCAATAAGGATCCGAGGGAGGGGGTCTACATCTGCTTTTTCAGCCCCAGCTGGAGGCTGGTaGCACCGTGCTGGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: KGTPIRIRGRGSTSAFSAPAGGW*HRAGPR
Trigger: ACGAGGCCCAGCACGGTGTCACCAGCCTCCAGCTGG...GGCTGAAAAAGCAGATGTAGACCCCCTCCCTCGGATCCTTATTGGTGTGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp TTTGGGGGCTCTGACATGGGAAAGACTCCGAGTCACCCAGGGAGGAGCTGGGCACCGCCGTTTTTGCGCTaGTGGTTCAGGTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FGGSDMGKTPSHPGRSWAPPFLR*WFRLCS
Trigger: GCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGG...TGCCCAGCTCCTCCCTGGGTGACTCGGAGTCTTTCCCATGTCAGAGCCCCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp TTTGGGGGCTCTGACATGGGAAAGACTCCGAGTCACCCAGGGAGGAGCTGGGCAAGCGCCCGCCGTTTTTaGGCTGCTGGTTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: FGGSDMGKTPSHPGRSWASARRF*AAGSGC
Trigger: ACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCT...TGCCCAGCTCCTCCCTGGGTGACTCGGAGTCTTTCCCATGTCAGAGCCCCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTGTTGGCTGCCAAGGCTaGCCCGTTGGTCATGTCCAA +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPVGCQG*PVGHVQ
Trigger: TTGGACATGACCAACGGGGCAGCCTTGGCAGCCAAC...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACCAACCTCCAAAATCACCTAGGCAAGGACAGATGCCCAGGGGTGCCATCTGTGTTGGCCTGCAATGGCTaGACCAGCCGCCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TNLQNHLGKDRCPGVPSVLACNG*TSRPSC
Trigger: GCAGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAA...CACAGATGGCACCCCTGGGCATCTGTCCTTGCCTAGGTGATTTTGGAGGTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTTTGGCCTGCAATGGCTaGACCAGCCGCCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPLACNG*TSRPSC
Trigger: GCAGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAA...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTGGCGACCGCATGGAAGGATaGCTGCCTCCCTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: TFLVPNSIETPYFPDQTGDRMEG*LPPSGP
Trigger: GGGGCCTGAGGGAGGCAGGCATCCTTCCATGCGGTC...GCCAGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGTGCTGGGCCTCGTGCTaGCGGAGCCGGTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: RAAWVDSSWNCASLLWRPCWASC*RSRLAS
Trigger: TGATGCCAACCGGCTCCGGCAGCACGAGGCCCAGCA...CGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp AAGGGCACACCAATAAGGATCCGAGGGAGGGGGTCTACATCTGCTTTTTCAGCCAGGCTGGTGACACCGTaGTGGGCCTCGTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: KGTPIRIRGRGSTSAFSARLVTP*WASCCR
Trigger: CCGGCAGCACGAGGCCCAGCACGGTGTCACCAGCCT...GGCTGAAAAAGCAGATGTAGACCCCCTCCCTCGGATCCTTATTGGTGTGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTATCTCACAAGCCACCTaGTTCCTGGTCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPISQAT*FLVRLL
Trigger: GAGGAGCCGGACCAGGAAGCAGGTGGCTTGTGAGAT...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GAGCTTGTCCTAGCAGTGAAAATGCTCGCCTCCAAGCAGGGCTCAGAAAGGTCTCCGCCCTCGCTGGACTaGGCGCCACTCTCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: ELVLAVKMLASKQGSERSPPSLD*APLSPL
Trigger: GAGAGGAGAGAGTGGCGCGCAGTCCAGCGAGGGCGG...AGACCTTTCTGAGCCCTGCTTGGAGGCGAGCATTTTCACTGCTAGGACAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGTGGCCAGGCCGTTTTTGCGCTGCTaGTTCAGGTTGTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: PVFSGGRLTRGVGKGVARPFLRC*FRLCSI
Trigger: GATGCTGCACAACCTGAACCAGCAGCGCAAAAACGG...CCTGGCCACCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp AAGGGCACACCAATAAGGATCCGAGGGAGGGGGTCTACATCTGCTTTTTCAGCCCACGGCGCGGTGCGCTaGGAAGCTCTCGTCGCCTAC +
Preference number: 4 (lower is better)
Translates to: KGTPIRIRGRGSTSAFSAHGAVR*EALVAY
Trigger: GTAGGCGACGAGAGCTTCCCAGCGCACCGCGCCGTG...GGCTGAAAAAGCAGATGTAGACCCCCTCCCTCGGATCCTTATTGGTGTGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp CCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTCCGCCGTCGCCCAACTaGGCGCTGAACACCGACTCA +
Preference number: 4 (lower is better)
Translates to: PTFLVPNSIETPYFPDQTPPSPN*ALNTDS
Trigger: TGAGTCGGTGTTCAGCGCCCAGTTGGGCGACGGCGG...AGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GCTGCCTCATTTCCCTTCAGGCCCCATGGGCTGCTGGTCAACCTCAGGATCTACCCAAGCGCACCACGATaGGGGAAGTGTAGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: AASFPFRPHGLLVNLRIYPSAPR*GKCRRS
Trigger: ACTTCGCCTACACTTCCCGCATCGTGGTGCGCTTGG...GTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAATGAGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR GCA 90 bp ACCAACCTCCAAAATCACCTAGGCAAGGACAGATGCCCAGGGGTGCCATCTGTGCCTCCTCTGGCTGCATaGTGCCGGCGATGCCATTGC +
Preference number: 4 (lower is better)
Translates to: TNLQNHLGKDRCPGVPSVPPLAA*CRRCHC
Trigger: GCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGG...CACAGATGGCACCCCTGGGCATCTGTCCTTGCCTAGGTGATTTTGGAGGTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCAAAGAGGCTTGGCCTaGAATGGCTGCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLQRGLA*NGCTSR
Trigger: GCGGCTGGTGCAGCCATTGCAGGCCAAGCCTCTTTG...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGATCTCACAAGCCACCTaGTTCCTGGTCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ELCQSSLEADSLVEWGKGISQAT*FLVRLL
Trigger: GAGGAGCCGGACCAGGAAGCAGGTGGCTTGTGAGAT...CCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp CATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGGCCCCTCGCTGTaGTTCTTCAGGTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: HVTQLRYTMSLPAGCPTFLGPSL*FFRWSA
Trigger: GGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAG...GAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGCGCAGTGGAACGCTaGTCCCCCATTCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPGAVER*SPIQDG
Trigger: CCCATCCTGAATGGGGGAGCAGCGTTCCACTGCGCC...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266269.10
ENST00000405309.7
CDS-3UTR GCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTCCGAGAGCCCGGACATaGACCTTCTGGATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPPRART*TFWMCL
Trigger: CAAACACATCCAGAAGGTGCATGTCCGGGCTCTCGG...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCGATGCCATTGCTGTTaGCTGCCAAGGCTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLRCHCC*LPRLPR
Trigger: ACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCG...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCAGCTGCCTCCTCCTCTaGCTGCATGCTGCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: HVTQLRYTMSLPAGCPTFSCLLL*LHAAGD
Trigger: ATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCT...GAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCTTCAGGCCCCATaGGCTGCTGGTCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: DTTEVHNVPTCRLSHLPGSLQAP*AAGQPQ
Trigger: CTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGA...ACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTCCAGCTGGAGGCTGGTaGCACCGTGCTGGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: STWACSHVTQLRYTMSLPPAGGW*HRAGPR
Trigger: ACGAGGCCCAGCACGGTGTCACCAGCCTCCAGCTGG...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp CCAGGAAGGCACCAACCTCCAAAATCACCTAGGCAAGGACAGATGCCCAGGGGTCTGGGCAAAGTCCCATaGTGGCAGGTCGCTAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGRHQPPKSPRQGQMPRGLGKVP*WQVARK
Trigger: CTTCCTAGCGACCTGCCATCATGGGACTTTGCCCAG...ACCCCTGGGCATCTGTCCTTGCCTAGGTGATTTTGGAGGTTGGTGCCTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR TCA 90 bp ATGGGAAGGGAGGATGACGAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGCTCCAGGCAGAGGGCTaGGCTCAGGGGGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: MGREDDELEKWEGTKITELQAEG*AQGALG
Trigger: TCCAAGAGCCCCCTGAGCTCAGCCCTCTGCCTGGAG...CTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGTTGGCTGCCAAGGCTaGCCCGTTGGTCATGTCCAA +
Preference number: 4 (lower is better)
Translates to: WNCASLLWRPTHSWSGERVGCQG*PVGHVQ
Trigger: TTGGACATGACCAACGGGGCAGCCTTGGCAGCCAAC...CCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp GACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGTGTTGGCTGCCAAGGCTaGCCCGTTGGTCATGTCCAA +
Preference number: 4 (lower is better)
Translates to: DTTEVHNVPTCRLSHLPGVGCQG*PVGHVQ
Trigger: TTGGACATGACCAACGGGGCAGCCTTGGCAGCCAAC...ACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACAGAACCCAAACATCACTTCCCTCCGCATTCACAGCATTTCCCAGCAGTCCCCCCTCCTCTGGCTGCATaGTGCCGGCGATGCCATTGC +
Preference number: 4 (lower is better)
Translates to: TEPKHHFPPHSQHFPAVPPPLAA*CRRCHC
Trigger: GCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGG...GGGGACTGCTGGGAAATGCTGTGAATGCGGAGGGAAGTGATGTTTGGGTTCTGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGTGGGCCGCTCAGAAGTGTaGACCTGCTTGATATGTCCG +
Preference number: 4 (lower is better)
Translates to: IVPVFSGGRLTRGVGKGVGRSEV*TCLICP
Trigger: CGGACATATCAAGCAGGTGCACACTTCTGAGCGGCC...CACCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp ATGCCGACTGAACAATCTGAAACCCAAAGGACTCGAGGAGAGACATGTTCTGCTTCCTGCAAACGCGCCTaGCACCTCCCCTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: MPTEQSETQRTRGETCSASCKRA*HLPSRP
Trigger: CGGGCGGGAGGGGAGGTGGCAGGCGCGTTTGCAGGA...AGCAGAACATGTCTCTCCTCGAGTCCTTTGGGTTTCAGATTGTTCAGTCGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR GCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGAGGTGCGCCCCTCCTaGAAACGCGCCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: STWACSHVTQLRYTMSLPEVRPS*KRACHL
Trigger: GAGGTGGCAGGCGCGTTTGCAGGAGGGGCGCACCTC...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTCTTCTTCAGGTGGTCTaGCATGTATGCTGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPLLQVV*HVCCPQ
Trigger: TTGCGGGCAGCATACATGGCAGACCACCTGAAGAAG...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTCTCGGTTACAGATACTaGAGAAGTTGCTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPLGYRY*RSCWAP
Trigger: AGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAG...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCACAATGTCCCTACCTaGCGGCTGTCCCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLHNVPT*RLSHLP
Trigger: AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTG...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCCGATGCCATTGCTGTTaGCTGCCAAGGCTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: SHVTQLRYTMSLPAGCPTRCHCC*LPRLPR
Trigger: ACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCG...GGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCCACAGGCAAAGAGGCTTaGCCTGCAATGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SISQQSPDGCFRGDTAAATGKEA*PAMAAP
Trigger: TGGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGT...GGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGCCCAGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTCAGGTTGGCCTTCCTTaGGCGGCCCCGGCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: SPERNLDAIGGSRKVLLAQVGLP*AAPASL
Trigger: AAGCGAGGCCGGGGCCGCCCAAGGAAGGCCAACCTG...AGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCTGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTCAGGTTGGCCTTCCTTaGGCGGCCCCGGCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: STWACSHVTQLRYTMSLPQVGLP*AAPASL
Trigger: AAGCGAGGCCGGGGCCGCCCAAGGAAGGCCAACCTG...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCAAGCCACCTGCTTCCTaGTCCGGCTCCTCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: HVTQLRYTMSLPAGCPTFKPPAS*SGSSFG
Trigger: CCCGAAAGAGGAGCCGGACCAGGAAGCAGGTGGCTT...GAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AAGGGCACACCAATAAGGATCCGAGGGAGGGGGTCTACATCTGCTTTTTCAGCCTGCTGCCCTCTGGGGTaGTCCAGCCCTGCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: KGTPIRIRGRGSTSAFSACCPLG*SSPASD
Trigger: ATCTGAGGCAGGGCTGGACCACCCCAGAGGGCAGCA...GGCTGAAAAAGCAGATGTAGACCCCCTCCCTCGGATCCTTATTGGTGTGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTAAACCCCCGCCCTCGCTaGACTGCGCGCCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLNPRPR*TARHSL
Trigger: GAGAGAGTGGCGCGCAGTCCAGCGAGGGCGGGGGTT...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTGGAAGGGGAACACCGTaGTGGGTTTTAACATGGACC +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPGRGTP*WVLTWT
Trigger: GGTCCATGTTAAAACCCACCACGGTGTTCCCCTTCC...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266269.10
CDS-3UTR CCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTAGCTCAGGGGGCTCTTaGAGGACACTCACCCCATGG +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPSSGGS*RTLTPW
Trigger: CCATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCT...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCAGCTCAGGGGGCTCTTaGAGGACACTCACCCCATGG +
Preference number: 4 (lower is better)
Translates to: HVTQLRYTMSLPAGCPTFSSGGS*RTLTPW
Trigger: CCATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCT...GAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCCTCATTTTTCAGGATGGGCTCCTaGTGCCTGGAGACCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SQQSPDGCFRGDTAAASFFRMGS*CLETSV
Trigger: AACCGAGGTCTCCAGGCACCAGGAGCCCATCCTGAA...AAATGAGGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR TCA 90 bp CCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTCGCCCAACTGGGCGCTaGACACCGACTCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: PTFLVPNSIETPYFPDQTRPTGR*TPTQST
Trigger: AGTACTTTGAGTCGGTGTTCAGCGCCCAGTTGGGCG...AGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp GACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGTTGGGGACCCAAACATTaGGTCCAGCAGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: DTTEVHNVPTCRLSHLPGWGPKH*VQQVGL
Trigger: AAGGCCAACCTGCTGGACTCAATGTTTGGGTCCCCA...ACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp ATCACAAGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGCCAGCTGGAGGCTGGTaGCACCGTGCTGGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: ITRSTWACSHVTQLRYTMPAGGW*HRAGPR
Trigger: ACGAGGCCCAGCACGGTGTCACCAGCCTCCAGCTGG...CATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTCCGCCGTTTTTGCGCTaGTGGTTCAGGTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPPPFLR*WFRLCS
Trigger: GCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGG...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCAGCGCCCGCCGTTTTTaGGCTGCTGGTTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SHVTQLRYTMSLPAGCPTSARRF*AAGSGC
Trigger: ACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCT...GGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CCAGGAAGGCACCAACCTCCAAAATCACCTAGGCAAGGACAGATGCCCAGGGGTTTGGAGCTGATAGTGTaGATCTCCAGCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PGRHQPPKSPRQGQMPRGLELIV*ISSSRL
Trigger: CAGCCGGGAGCTGGAGATGCACACTATCAGCTCCAA...ACCCCTGGGCATCTGTCCTTGCCTAGGTGATTTTGGAGGTTGGTGCCTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp AGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACCCCGACCGCATGGAAGGATaGCTGCCTCCCTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RKKLGCYRGFQKGAPCYPDRMEG*LPPSGP
Trigger: GGGGCCTGAGGGAGGCAGGCATCCTTCCATGCGGTC...GGGGTAGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp ACCAACCTCCAAAATCACCTAGGCAAGGACAGATGCCCAGGGGTGCCATCTGTGGGCAGATGTAAGGCTTaGCCACGGACCCATCATGGG +
Preference number: 4 (lower is better)
Translates to: TNLQNHLGKDRCPGVPSVGRCKA*PRTHHG
Trigger: CCCATGATGGGTCCGTGGGCAAGCCTTACATCTGCC...CACAGATGGCACCCCTGGGCATCTGTCCTTGCCTAGGTGATTTTGGAGGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGCAGATGTAAGGCTTaGCCACGGACCCATCATGGG +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPGRCKA*PRTHHG
Trigger: CCCATGATGGGTCCGTGGGCAAGCCTTACATCTGCC...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGGGGTCTCAGGCCAAATaGCCCTCCTGTTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RAAWVDSSWNCASLLWRPGSQAK*PSCSLP
Trigger: TGGAAGGGAACAGGAGGGGCATTTGGCCTGAGACCC...CGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp CCAGGAAGGCACCAACCTCCAAAATCACCTAGGCAAGGACAGATGCCCAGGGGTCAGAAAGGTGCTCCTTaGTACCCCCATTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PGRHQPPKSPRQGQMPRGQKGAP*YPHLGA
Trigger: AGCCCCCAAATGGGGGTAGCAAGGAGCACCTTTCTG...ACCCCTGGGCATCTGTCCTTGCCTAGGTGATTTTGGAGGTTGGTGCCTTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGTCCTGCAAACGCGCCTaGCACCTCCCCTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LLPIKETGTGFALEAYVVSCKRA*HLPSRP
Trigger: CGGGCGGGAGGGGAGGTGGCAGGCGCGTTTGCAGGA...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GCTGCCTCATTTCCCTTCAGGCCCCATGGGCTGCTGGTCAACCTCAGGATCTACCTTCTTCAGGTGGTCTaGCATGTATGCTGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: AASFPFRPHGLLVNLRIYLLQVV*HVCCPQ
Trigger: TTGCGGGCAGCATACATGGCAGACCACCTGAAGAAG...GTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAATGAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR GCA 90 bp GACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGTAGATACTGCAGAAGTTaGTGGGCCCCTCGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: DTTEVHNVPTCRLSHLPGRYCRS*WAPRCA
Trigger: AGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCT...ACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AAGCAGATAAGCTGGTGGCTAGTTCCCAGGAAGGCACCAACCTCCAAAATCACCAGCTGCCTCCTCCTCTaGCTGCATGCTGCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: KQISWWLVPRKAPTSKITSCLLL*LHAAGD
Trigger: ATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCT...GGTGATTTTGGAGGTTGGTGCCTTCCTGGGAACTAGCCACCAGCTTATCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp AAGGGCACACCAATAAGGATCCGAGGGAGGGGGTCTACATCTGCTTTTTCAGCCAAGCCACCTGCTTCCTaGTCCGGCTCCTCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: KGTPIRIRGRGSTSAFSAKPPAS*SGSSFG
Trigger: CCCGAAAGAGGAGCCGGACCAGGAAGCAGGTGGCTT...GGCTGAAAAAGCAGATGTAGACCCCCTCCCTCGGATCCTTATTGGTGTGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp ACCAACCTCCAAAATCACCTAGGCAAGGACAGATGCCCAGGGGTGCCATCTGTGGTTGCTGGAGTGTGCTaGGCCCAGGTTTTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: TNLQNHLGKDRCPGVPSVVAGVC*AQVFKG
Trigger: GCCCTTGAAAACCTGGGCCCAGCACACTCCAGCAAC...CACAGATGGCACCCCTGGGCATCTGTCCTTGCCTAGGTGATTTTGGAGGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp TGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGAGAAGAGAGTGTTGCTaGAGTGTGCTGGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: WNCASLLWRPTHSWSGERRRECC*SVLGPG
Trigger: ACCTGGGCCCAGCACACTCCAGCAACACTCTCTTCT...CCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp AGTGATGCCAGGGGAAGGGAAGCAGATAAGCTGGTGGCTAGTTCCCAGGAAGGCTTGGGGGCTCTGACATaGGAAAGACTCCGAGTCACC +
Preference number: 4 (lower is better)
Translates to: SDARGREADKLVASSQEGLGALT*ERLRVT
Trigger: GGTGACTCGGAGTCTTTCCCATGTCAGAGCCCCCAA...GCCTTCCTGGGAACTAGCCACCAGCTTATCTGCTTCCCTTCCCCTGGCATCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp AGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCCCTGTGCTTCTTCAGGTaGTCTGCCATGTATGCTGCC +
Preference number: 4 (lower is better)
Translates to: SISQQSPDGCFRGDTAAALCFFR*SAMYAA
Trigger: GGCAGCATACATGGCAGACCACCTGAAGAAGCACAG...GGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCGGCCCCATGGGCTGCTaGTCAACCTCAGGATCTACT +
Preference number: 4 (lower is better)
Translates to: HVTQLRYTMSLPAGCPTFGPMGC*STSGST
Trigger: AGTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCC...GAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGAGATGGTTGTTTCCGTaGGGACACAGCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLRWLFP*GHSSCL
Trigger: GAGGCAGCTGCTGTGTCCCCACGGAAACAACCATCT...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTGGCCCAGCAGTCCCCAGATaGTTGTTTCCGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: TFLVPNSIETPYFPDQTGPAVPR*LFPWGH
Trigger: GTGTCCCCACGGAAACAACCATCTGGGGACTGCTGG...GCCAGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGAGGACACTCACCCCATaGTCCATGGGATGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLRTLTP*SMGCFW
Trigger: CCAGAAGCATCCCATGGACCATGGGGTGAGTGTCCT...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTGCTGTCCCACCTTCCTaGTTCCCAACAGCATTGAAA +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPAVPPS*FPTALK
Trigger: TTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGC...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CAA 72 bp CTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATaGAAACCCCCTACTTCCCTGACCAGACTGGCATTT +
Preference number: 4 (lower is better)
Translates to: LPAVPPSWFPTA*KPPTSLTRLAF
Trigger: AAATGCCAGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp AAGGGCACACCAATAAGGATCCGAGGGAGGGGGTCTACATCTGCTTTTTCAGCCACTTGGCGGCCGTCATaGGTTCGGGAAAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KGTPIRIRGRGSTSAFSATWRPS*VRESSP
Trigger: TGGAGAGCTTTCCCGAACTCATGACGGCCGCCAAGT...GGCTGAAAAAGCAGATGTAGACCCCCTCCCTCGGATCCTTATTGGTGTGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR TCA 90 bp TCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCCTCATTTGCCGGTTGGCATCAGTaGACACCTTACCACATAGAC +
Preference number: 4 (lower is better)
Translates to: SQQSPDGCFRGDTAAASFAGWHQ*TPYHID
Trigger: GTCTATGTGGTAAGGTGTTCACTGATGCCAACCGGC...AAATGAGGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR GCA 90 bp TGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGTCTCCGTGCTGTGTCTaGTCACCTGGTATGTGTAGC +
Preference number: 4 (lower is better)
Translates to: WNCASLLWRPTHSWSGERSPCCV*SPGMCS
Trigger: GCTACACATACCAGGTGAGCAGACACAGCACGGAGA...CCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp ATGGGAAGGGAGGATGACGAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGCATGCTGCCGGCGATaGCATTGCTGTTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: MGREDDELEKWEGTKITEACCRR*HCCWLP
Trigger: TGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGC...CTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AAGCAGATAAGCTGGTGGCTAGTTCCCAGGAAGGCACCAACCTCCAAAATCACCCCTCTGGCTGCATGCTaGCGGCGATGCCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: KQISWWLVPRKAPTSKITPLAAC*RRCHCC
Trigger: ACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGG...GGTGATTTTGGAGGTTGGTGCCTTCCTGGGAACTAGCCACCAGCTTATCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp CCCGAGAGCCCGGACATGCACCTTCTGGATGTGTTTGTTCAAGTAGGACTTAGACCTCTGGCTGCATGCTaGCGGCGATGCCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: PESPDMHLLDVFVQVGLRPLAAC*RRCHCC
Trigger: ACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGG...TCTAAGTCCTACTTGAACAAACACATCCAGAAGGTGCATGTCCGGGCTCTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR GCA 90 bp GTTCAAGTAGGACTTAGAGCGGAAGAAGCTCCCACATTCAGGGCATGGGTACTTCCTCCTCTGGCTGCATaGTGCCGGCGATGCCATTGC +
Preference number: 4 (lower is better)
Translates to: VQVGLRAEEAPTFRAWVLPPLAA*CRRCHC
Trigger: GCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGG...AAGTACCCATGCCCTGAATGTGGGAGCTTCTTCCGCTCTAAGTCCTACTTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR GCA 90 bp GAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGAAGGCTGGTGACACCGTaGTGGGCCTCGTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: ELEKWEGTKITEVPEYHRRLVTP*WASCCR
Trigger: CCGGCAGCACGAGGCCCAGCACGGTGTCACCAGCCT...TCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTGCGCGAGCGAAGAGGTaGGCCCCTCCTGCAAACGCG +
Preference number: 4 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGARAKR*APPANA
Trigger: CGCGTTTGCAGGAGGGGCGCACCTCTTCGCTCGCGC...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTGGCGAGCCATTGGCACTCTaGTTCTCTGGCGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TFLVPNSIETPYFPDQTGEPLAL*FSGVFR
Trigger: CCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTC...GCCAGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGGAATTCCAGCTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCACGGCGCGGTGCGCTaGGAAGCTCTCGTCGCCTAC +
Preference number: 4 (lower is better)
Translates to: RNSSFFPLKKLGLVLPWRHGAVR*EALVAY
Trigger: GTAGGCGACGAGAGCTTCCCAGCGCACCGCGCCGTG...CCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAGCTGGAATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGACAGGCAAAGAGGCTTaGCCTGCAATGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: RAAWVDSSWNCASLLWRPTGKEA*PAMAAP
Trigger: TGGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGT...CGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp CATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCACAGGCAAAGAGGCTTaGCCTGCAATGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: HVTQLRYTMSLPAGCPTFTGKEA*PAMAAP
Trigger: TGGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGT...GAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTCAGGTTGGCCTTCCTTaGGCGGCCCCGGCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGQVGLP*AAPASL
Trigger: AAGCGAGGCCGGGGCCGCCCAAGGAAGGCCAACCTG...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGTCAAGTGATCAGGCCTaGAGAAGCCTTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: WNCASLLWRPTHSWSGERSSDQA*RSLSHS
Trigger: GCTGTGGGAAAGGCTTCTCCAGGCCTGATCACTTGA...CCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp GTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGTGTGCCAGTCTTCTCTaGAGGCCGACTCACTCGTGG +
Preference number: 4 (lower is better)
Translates to: VDSSWNCASLLWRPTHSWCASLL*RPTHSW
Trigger: CCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACA...CCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp GAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGAAACCCCCGCCCTCGCTaGACTGCGCGCCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: ELEKWEGTKITEVPEYHRNPRPR*TARHSL
Trigger: GAGAGAGTGGCGCGCAGTCCAGCGAGGGCGGGGGTT...TCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCTGTGCTTCTTCAGGTaGTCTGCCATGTATGCTGCC +
Preference number: 4 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLLCFFR*SAMYAA
Trigger: GGCAGCATACATGGCAGACCACCTGAAGAAGCACAG...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTGGCTACTGCAGAAGTTGCTaGGCCCCTCGCTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TFLVPNSIETPYFPDQTGYCRSC*APRCAS
Trigger: AGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTA...GCCAGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTAGGGGAACACCGTGGTaGGTTTTAACATGGACCTTT +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPRGTPW*VLTWTF
Trigger: AAAGGTCCATGTTAAAACCCACCACGGTGTTCCCCT...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000266269.10
CDS-3UTR CCA 90 bp GACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGTAGGAGAAAGAGCCATTaGCACTCTGCTTCTCTGGCG +
Preference number: 4 (lower is better)
Translates to: DTTEVHNVPTCRLSHLPGRRKSH*HSASLA
Trigger: CGCCAGAGAAGCAGAGTGCCAATGGCTCTTTCTCCT...ACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTTGGGAGAATGGGTGGTaGAGAAGGAGTTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPWENGW*RRSWSG
Trigger: CCCACTCCAACTCCTTCTCCACCACCCATTCTCCCA...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CAA 72 bp TTTTTGGGGACTGCCATGTCGCAGGAGAAAGAGCCATaGGCACTCTGCTTCTCTGGCGTCTTCAGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: FLGTAMSQEKEP*ALCFSGVFRSL
Trigger: CAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTCTTTCTCCTGCGACATGGCAGTCCCCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR TCA 90 bp AGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGTGCGGTCTTTTCTCTTaGACCGCAACCCACACACAG +
Preference number: 4 (lower is better)
Translates to: RAAWVDSSWNCASLLWRPCGLFS*TATHTQ
Trigger: CTGTGTGTGGGTTGCGGTTCAAGAGAAAAGACCGCA...CGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR TCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTTGCGGTCTTTTCTCTTaGACCGCAACCCACACACAG +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPCGLFS*TATHTQ
Trigger: CTGTGTGTGGGTTGCGGTTCAAGAGAAAAGACCGCA...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp TCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTGCGGTCTTTTCTCTTaGACCGCAACCCACACACAG +
Preference number: 4 (lower is better)
Translates to: SHVTQLRYTMSLPAGCPTCGLFS*TATHTQ
Trigger: CTGTGTGTGGGTTGCGGTTCAAGAGAAAAGACCGCA...GGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGTGGGAAGGGCAGAGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTGCTGGTTCAGGTTGTaGAGCATCTCCGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SGKGRGQHGLTLVGIVPVCWFRL*SISVLC
Trigger: ACACAGCACGGAGATGCTGCACAACCTGAACCAGCA...GACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCTCTGCCCTTCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp ATGGGAAGGGAGGATGACGAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTTGGCTGCCAAGGCTaGCCCGTTGGTCATGTCCAA +
Preference number: 4 (lower is better)
Translates to: MGREDDELEKWEGTKITEVGCQG*PVGHVQ
Trigger: TTGGACATGACCAACGGGGCAGCCTTGGCAGCCAAC...CTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTAGCATGCTGCCGGCGATaGCATTGCTGTTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLACCRR*HCCWLP
Trigger: TGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGC...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGAGCCTCCTCCTCTGGCTaGATGCTGCCGGCGATGCCA +
Preference number: 4 (lower is better)
Translates to: ELEKWEGTKITEVPEYHRASSSG*MLPAMP
Trigger: TGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGC...TCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACCCCCAAAGAGGCTTGGCCTaGAATGGCTGCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RKKLGCYRGFQKGAPCYPQRGLA*NGCTSR
Trigger: GCGGCTGGTGCAGCCATTGCAGGCCAAGCCTCTTTG...GGGGTAGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTGCATGGAAGGATGCCTaGCTCCCTCAGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGAWKDA*LPQAPW
Trigger: CCAGGGGGCCTGAGGGAGGCAGGCATCCTTCCATGC...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTGACCGCATGGAAGGATaGCTGCCTCCCTCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGDRMEG*LPPSGP
Trigger: GGGGCCTGAGGGAGGCAGGCATCCTTCCATGCGGTC...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGCATCACGGAAGATCTTaGCGCAGATCTCACAAGCCA +
Preference number: 4 (lower is better)
Translates to: WNCASLLWRPTHSWSGERHHGRS*RRSHKP
Trigger: TGGCTTGTGAGATCTGCGGCAAGATCTTCCGTGATG...CCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCATCACGGAAGATCTTaGCGCAGATCTCACAAGCCA +
Preference number: 4 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLHHGRS*RRSHKP
Trigger: TGGCTTGTGAGATCTGCGGCAAGATCTTCCGTGATG...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACAGAACCCAAACATCACTTCCCTCCGCATTCACAGCATTTCCCAGCAGTCCCCGGCCGCTCAGAAGTGTaGACCTGCTTGATATGTCCG +
Preference number: 4 (lower is better)
Translates to: TEPKHHFPPHSQHFPAVPGRSEV*TCLICP
Trigger: CGGACATATCAAGCAGGTGCACACTTCTGAGCGGCC...GGGGACTGCTGGGAAATGCTGTGAATGCGGAGGGAAGTGATGTTTGGGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGGGGGTTCCAGAAAGGTaGTCCTTGCTACCCCCATTT +
Preference number: 4 (lower is better)
Translates to: RAAWVDSSWNCASLLWRPGVPER*SLLPPF
Trigger: AAATGGGGGTAGCAAGGAGCACCTTTCTGGAACCCC...CGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp GAGCTTGTCCTAGCAGTGAAAATGCTCGCCTCCAAGCAGGGCTCAGAAAGGTCTGTGGTCTGCCATGTATaGTGCCCGCAAGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: ELVLAVKMLASKQGSERSVVCHV*CPQVLP
Trigger: GGGAAGTACTTGCGGGCAGCATACATGGCAGACCAC...AGACCTTTCTGAGCCCTGCTTGGAGGCGAGCATTTTCACTGCTAGGACAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACAGAACCCAAACATCACTTCCCTCCGCATTCACAGCATTTCCCAGCAGTCCCCGTGGTCTGCCATGTATaGTGCCCGCAAGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: TEPKHHFPPHSQHFPAVPVVCHV*CPQVLP
Trigger: GGGAAGTACTTGCGGGCAGCATACATGGCAGACCAC...GGGGACTGCTGGGAAATGCTGTGAATGCGGAGGGAAGTGATGTTTGGGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACAGAACCCAAACATCACTTCCCTCCGCATTCACAGCATTTCCCAGCAGTCCCCAGATACTGCAGAAGTTaGTGGGCCCCTCGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TEPKHHFPPHSQHFPAVPRYCRS*WAPRCA
Trigger: AGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCT...GGGGACTGCTGGGAAATGCTGTGAATGCGGAGGGAAGTGATGTTTGGGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ATGGGAAGGGAGGATGACGAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGTGGGGACACAGCAGCTaGCTCATTTCCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: MGREDDELEKWEGTKITEWGHSS*LISLQA
Trigger: GGCCTGAAGGGAAATGAGGCAGCTGCTGTGTCCCCA...CTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGTAGGTCAACCTGGGCTTaGTCACATGTGACACAACTG +
Preference number: 4 (lower is better)
Translates to: DTTEVHNVPTCRLSHLPGRSTWA*SHVTQL
Trigger: CAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT...ACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACCCCCGATGCCATTGCTGTTaGCTGCCAAGGCTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RKKLGCYRGFQKGAPCYPRCHCC*LPRLPR
Trigger: ACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCG...GGGGTAGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp GAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACCCCCTGCCACACTGGGGAATaGGGAAGTCAGCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ERNLDAIGGSRKVLLATPCHTGE*GSQQLG
Trigger: CCCCAACTGCTGACTTCCCCATTCCCCAGTGTGGCA...GGGGGTAGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp AGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGGTGTCAGGAACCGAATaGGACGACCTCCACAAAGCA +
Preference number: 4 (lower is better)
Translates to: RAAWVDSSWNCASLLWRPVSGTE*DDLHKA
Trigger: TGCTTTGTGGAGGTCGTCCCATTCGGTTCCTGACAC...CGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp ACCAACCTCCAAAATCACCTAGGCAAGGACAGATGCCCAGGGGTGCCATCTGTGGGGAAGCAGATAAGCTaGTGGCTAGTTCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TNLQNHLGKDRCPGVPSVGKQIS*WLVPRK
Trigger: CTTCCTGGGAACTAGCCACCAGCTTATCTGCTTCCC...CACAGATGGCACCCCTGGGCATCTGTCCTTGCCTAGGTGATTTTGGAGGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp AGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGGGGCAGAGGGCAGCATaGGTTGACTCTAGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: RAAWVDSSWNCASLLWRPGQRAA*VDSSWN
Trigger: ATTCCAACTAGAGTCAACCCATGCTGCCCTCTGCCC...CGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAAACCCCCGCCCTCGCTaGACTGCGCGCCACTCTCTC +
Preference number: 4 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGINPRPR*TARHSL
Trigger: GAGAGAGTGGCGCGCAGTCCAGCGAGGGCGGGGGTT...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCCTGTGCTTCTTCAGGTaGTCTGCCATGTATGCTGCC +
Preference number: 4 (lower is better)
Translates to: SHVTQLRYTMSLPAGCPTLCFFR*SAMYAA
Trigger: GGCAGCATACATGGCAGACCACCTGAAGAAGCACAG...GGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTGGCAGGAGAAAGAGCCATTaGCACTCTGCTTCTCTGGCG +
Preference number: 4 (lower is better)
Translates to: TFLVPNSIETPYFPDQTGRRKSH*HSASLA
Trigger: CGCCAGAGAAGCAGAGTGCCAATGGCTCTTTCTCCT...GCCAGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CCCGAGAGCCCGGACATGCACCTTCTGGATGTGTTTGTTCAAGTAGGACTTAGAGGCCCCATGGGCTGCTaGTCAACCTCAGGATCTACT +
Preference number: 4 (lower is better)
Translates to: PESPDMHLLDVFVQVGLRGPMGC*STSGST
Trigger: AGTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCC...TCTAAGTCCTACTTGAACAAACACATCCAGAAGGTGCATGTCCGGGCTCTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR CCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTTCCCTTCAGGCCCCATaGGCTGCTGGTCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: STWACSHVTQLRYTMSLPSLQAP*AAGQPQ
Trigger: CTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGA...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCATTGGGAGAATGGGTaGTGGAGAAGGAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLHWENG*WRRSWS
Trigger: ACTCCAACTCCTTCTCCACCACCCATTCTCCCAATG...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGTCATTGGGAGAATGGGTaGTGGAGAAGGAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: DTTEVHNVPTCRLSHLPGHWENG*WRRSWS
Trigger: ACTCCAACTCCTTCTCCACCACCCATTCTCCCAATG...ACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTTCACCCCATGGTCCATaGGATGCTTCTGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPSPHGP*DASGFL
Trigger: AAGGAAGCCAGAAGCATCCCATGGACCATGGGGTGA...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTGGCTCACCCCATGGTCCATaGGATGCTTCTGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TFLVPNSIETPYFPDQTGSPHGP*DASGFL
Trigger: AAGGAAGCCAGAAGCATCCCATGGACCATGGGGTGA...GCCAGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp CCCGAGAGCCCGGACATGCACCTTCTGGATGTGTTTGTTCAAGTAGGACTTAGATGGGGACCCAAACATTaGGTCCAGCAGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PESPDMHLLDVFVQVGLRWGPKH*VQQVGL
Trigger: AAGGCCAACCTGCTGGACTCAATGTTTGGGTCCCCA...TCTAAGTCCTACTTGAACAAACACATCCAGAAGGTGCATGTCCGGGCTCTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR TCA 90 bp ACAGAACCCAAACATCACTTCCCTCCGCATTCACAGCATTTCCCAGCAGTCCCCGCCGGTTGGCATCAGTaGACACCTTACCACATAGAC +
Preference number: 4 (lower is better)
Translates to: TEPKHHFPPHSQHFPAVPAGWHQ*TPYHID
Trigger: GTCTATGTGGTAAGGTGTTCACTGATGCCAACCGGC...GGGGACTGCTGGGAAATGCTGTGAATGCGGAGGGAAGTGATGTTTGGGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp AGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCCAAGTGTGCACCTGCTTaGTATGTCCGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SISQQSPDGCFRGDTAAAKCAPA*YVRSSD
Trigger: ATCACTTGAACGGACATATCAAGCAGGTGCACACTT...GGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTGCTCACATGTGGGCACCTTGTCTTCATaGCAGGCCAGGTGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SLIRSIHITRSTWACSHVGTLSS*QARWER
Trigger: GCGCTCCCACCTGGCCTGTCATGAAGACAAGGTGCC...CACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp CCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTGGGGTCACTAAGAATTaGGCACCAGGAATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PTFLVPNSIETPYFPDQTGVTKN*APGIPA
Trigger: AGCTGGAATTCCTGGTGCTCAATTCTTAGTGACCCC...AGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp AGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCCAAATCACGTAAGAACTaGAATTTGGGGTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SISQQSPDGCFRGDTAAAKSRKN*NLGWGC
Trigger: ACACCCCCACCCCAAATTTCAGTTCTTACGTGATTT...GGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp CCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTAATCGGATCCTGATGTaGGCATTTCTGGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PTFLVPNSIETPYFPDQTNRILM*AFLAFS
Trigger: CGAGAAGGCCAGAAATGCTCACATCAGGATCCGATT...AGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351933.8
CDS-3UTR GCA 90 bp ACAGAACCCAAACATCACTTCCCTCCGCATTCACAGCATTTCCCAGCAGTCCCCTGCTGGTTCAGGTTGTaGAGCATCTCCGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TEPKHHFPPHSQHFPAVPCWFRL*SISVLC
Trigger: ACACAGCACGGAGATGCTGCACAACCTGAACCAGCA...GGGGACTGCTGGGAAATGCTGTGAATGCGGAGGGAAGTGATGTTTGGGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGTCCTAGCCTCCTCCTCTGGCTaGATGCTGCCGGCGATGCCA +
Preference number: 4 (lower is better)
Translates to: SSVSPGIAFSSNSLQLVLASSSG*MLPAMP
Trigger: TGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGC...TAGGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGTCCTATGCTGGGCCTCGTGCTaGCGGAGCCGGTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: SSVSPGIAFSSNSLQLVLCWASC*RSRLAS
Trigger: TGATGCCAACCGGCTCCGGCAGCACGAGGCCCAGCA...TAGGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTAAGGCTGGTGACACCGTaGTGGGCCTCGTGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLRLVTP*WASCCR
Trigger: CCGGCAGCACGAGGCCCAGCACGGTGTCACCAGCCT...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGTGTCAGAAGTGTGCACCTaGTTGATATGTCCGTTCAAG +
Preference number: 4 (lower is better)
Translates to: IVPVFSGGRLTRGVGKGVSEVCT*LICPFK
Trigger: CTTGAACGGACATATCAAGCAGGTGCACACTTCTGA...CACCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTATGGGGACACAGCAGCTaGCTCATTTCCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLWGHSS*LISLQA
Trigger: GGCCTGAAGGGAAATGAGGCAGCTGCTGTGTCCCCA...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGAACTGGGACTGGTTTTaGCTTGGAGGCCTATGTAGT +
Preference number: 4 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLNWDWF*LGGLCS
Trigger: ACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTT...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGACGTTCACCCGCTCCATaGCCGCCGCCCCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: FSAPVPYQVSLIFLQNIRRSPAP*PPPPPT
Trigger: AGTGGGAGGGGGCGGCGGCCATGGAGCGGGTGAACG...TCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGTCCTAAGGCTTGGCCTGCAATaGCTGCACCAGCCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: SSVSPGIAFSSNSLQLVLRLGLQ*LHQPPE
Trigger: CTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCCT...TAGGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCAAGGCTTGGCCTGCAATaGCTGCACCAGCCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSRLGLQ*LHQPPE
Trigger: CTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCCT...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTATGCCACACTGGGGAATaGGGAAGTCAGCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLCHTGE*GSQQLG
Trigger: CCCCAACTGCTGACTTCCCCATTCCCCAGTGTGGCA...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACTGGTGACACCGTGCTaGGCCTCGTGCTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLLVTPC*ASCCRS
Trigger: GCTCCGGCAGCACGAGGCCCAGCACGGTGTCACCAG...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGCCCAGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTATATCCCGGCGGGGCTaGGCAGAAGAGAGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SPERNLDAIGGSRKVLLAISRRG*AEESVA
Trigger: AGCAACACTCTCTTCTGCCCAGCCCCGCCGGGATAT...AGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGGCCCCATGGGCTGCTaGTCAACCTCAGGATCTACT +
Preference number: 4 (lower is better)
Translates to: STWACSHVTQLRYTMSLPGPMGC*STSGST
Trigger: AGTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCC...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ATCACAAGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTTCAGGCCCCATaGGCTGCTGGTCAACCTCAG +
Preference number: 4 (lower is better)
Translates to: ITRSTWACSHVTQLRYTMSLQAP*AAGQPQ
Trigger: CTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGA...CATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTCATTGGGAGAATGGGTaGTGGAGAAGGAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: PTFLVPNSIETPYFPDQTHWENG*WRRSWS
Trigger: ACTCCAACTCCTTCTCCACCACCCATTCTCCCAATG...AGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ACAGCAGCTGCCTCATTTCCCTTCAGGCCCCATGGGCTGCTGGTCAACCTCAGGATTTCTAAAGACCATTaGGAGAATGGGTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: TAAASFPFRPHGLLVNLRISKDH*ENGWWR
Trigger: TCTCCACCACCCATTCTCCCAATGGTCTTTAGAAAT...CCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAATGAGGCAGCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR TCA 90 bp AAGCAGATAAGCTGGTGGCTAGTTCCCAGGAAGGCACCAACCTCCAAAATCACCGCCGGTTGGCATCAGTaGACACCTTACCACATAGAC +
Preference number: 4 (lower is better)
Translates to: KQISWWLVPRKAPTSKITAGWHQ*TPYHID
Trigger: GTCTATGTGGTAAGGTGTTCACTGATGCCAACCGGC...GGTGATTTTGGAGGTTGGTGCCTTCCTGGGAACTAGCCACCAGCTTATCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR TCA 90 bp GAGCTTGTCCTAGCAGTGAAAATGCTCGCCTCCAAGCAGGGCTCAGAAAGGTCTATATGTCCGTTCAAGTaGTCAGGCCTGGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ELVLAVKMLASKQGSERSICPFK*SGLEKP
Trigger: AGGCTTCTCCAGGCCTGATCACTTGAACGGACATAT...AGACCTTTCTGAGCCCTGCTTGGAGGCGAGCATTTTCACTGCTAGGACAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp GTCGCAGGAGAAAGAGCCATTGGCACTCTGCTTCTCTGGCGTCTTCAGGTCGCTAAGTGTGCACCTGCTTaGTATGTCCGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: VAGERAIGTLLLWRLQVAKCAPA*YVRSSD
Trigger: ATCACTTGAACGGACATATCAAGCAGGTGCACACTT...AGCGACCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTCTTTCTCCTGCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR TCA 90 bp GGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGGCACCTTGTCTTCATaGCAGGCCAGGTGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: GLCSVFCPCPIPSLIDISGTLSS*QARWER
Trigger: GCGCTCCCACCTGGCCTGTCATGAAGACAAGGTGCC...AGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp ATCACAAGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGCAGGTCGCTGGCATCTaGGAGGTCACCATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: ITRSTWACSHVTQLRYTMQVAGI*EVTIGV
Trigger: GACTCCTATGGTGACCTCTCAGATGCCAGCGACCTG...CATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACCCCTGTGCAGCATCTCCGTaGTGTGTCTGCTCACCTGGT +
Preference number: 4 (lower is better)
Translates to: RKKLGCYRGFQKGAPCYPCAASP*CVCSPG
Trigger: ACCAGGTGAGCAGACACAGCACGGAGATGCTGCACA...GGGGTAGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp ATGGGAAGGGAGGATGACGAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGTGCTGGTTCAGGTTGTaGAGCATCTCCGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: MGREDDELEKWEGTKITECWFRL*SISVLC
Trigger: ACACAGCACGGAGATGCTGCACAACCTGAACCAGCA...CTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGCCTCTGGCTGCATGCTaGCGGCGATGCCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLPIKETGTGFALEAYVVPLAAC*RRCHCC
Trigger: ACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGG...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGCAAAGAGGCTTGGCCTaGAATGGCTGCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LLPIKETGTGFALEAYVVQRGLA*NGCTSR
Trigger: GCGGCTGGTGCAGCCATTGCAGGCCAAGCCTCTTTG...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGCCTCATTTTCAGAAGTGTGCACCTaGTTGATATGTCCGTTCAAG +
Preference number: 4 (lower is better)
Translates to: SQQSPDGCFRGDTAAASFSEVCT*LICPFK
Trigger: CTTGAACGGACATATCAAGCAGGTGCACACTTCTGA...AAATGAGGCAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR GCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGGCCGCTCAGAAGTGTaGACCTGCTTGATATGTCCG +
Preference number: 4 (lower is better)
Translates to: STWACSHVTQLRYTMSLPGRSEV*TCLICP
Trigger: CGGACATATCAAGCAGGTGCACACTTCTGAGCGGCC...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGGCGCAGTGGAACGCTaGTCCCCCATTCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: GLCSVFCPCPIPSLIDISGAVER*SPIQDG
Trigger: CCCATCCTGAATGGGGGAGCAGCGTTCCACTGCGCC...AGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000266269.10
ENST00000405309.7
CDS-3UTR CCA 90 bp ATCACAAGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGCCAAGGCTGCCCCGTTaGTCATGTCCAAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ITRSTWACSHVTQLRYTMPRLPR*SCPKGS
Trigger: GCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGG...CATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTCGATGCCATTGCTGTTaGCTGCCAAGGCTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGRCHCC*LPRLPR
Trigger: ACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCG...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ATCACAAGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTGCCACACTGGGGAATaGGGAAGTCAGCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ITRSTWACSHVTQLRYTMCHTGE*GSQQLG
Trigger: CCCCAACTGCTGACTTCCCCATTCCCCAGTGTGGCA...CATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGAAAGCCACCTGCTTCCTaGTCCGGCTCCTCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: ELEKWEGTKITEVPEYHRKPPAS*SGSSFG
Trigger: CCCGAAAGAGGAGCCGGACCAGGAAGCAGGTGGCTT...TCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACCCCGAAACCCCAGGCCTATaGGAAGTGATGCCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: RKKLGCYRGFQKGAPCYPETPGL*EVMPGE
Trigger: TTCCCCTGGCATCACTTCCCATAGGCCTGGGGTTTC...GGGGTAGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGGGCACTCTGCTTCTCTaGCGTCTTCAGGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLPIKETGTGFALEAYVVGTLLL*RLQVAG
Trigger: GCCAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCC...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTACTCCATTTTGTTTTTaGGGACTGCCATGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPTPFCF*GLPCRR
Trigger: CCTGCGACATGGCAGTCCCCAAAAACAAAATGGAGT...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTATGGGAGAATGGGTGGTaGAGAAGGAGTTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLWENGW*RRSWSG
Trigger: CCCACTCCAACTCCTTCTCCACCACCCATTCTCCCA...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTAAGGACACTCACCCCATaGTCCATGGGATGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLRTLTP*SMGCFW
Trigger: CCAGAAGCATCCCATGGACCATGGGGTGAGTGTCCT...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTGCTCACATGTGCGCCCAACTGGGCGCTaGACACCGACTCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: SLIRSIHITRSTWACSHVRPTGR*TPTQST
Trigger: AGTACTTTGAGTCGGTGTTCAGCGCCCAGTTGGGCG...CACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp ACCAACCTCCAAAATCACCTAGGCAAGGACAGATGCCCAGGGGTGCCATCTGTGTTGTGCCGGTTAAGATaGTACACATCACGGAAGATC +
Preference number: 4 (lower is better)
Translates to: TNLQNHLGKDRCPGVPSVLCRLR*YTSRKI
Trigger: GATCTTCCGTGATGTGTATCATCTTAACCGGCACAA...CACAGATGGCACCCCTGGGCATCTGTCCTTGCCTAGGTGATTTTGGAGGTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR TCA 90 bp AAGCAGATAAGCTGGTGGCTAGTTCCCAGGAAGGCACCAACCTCCAAAATCACCATATGTCCGTTCAAGTaGTCAGGCCTGGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: KQISWWLVPRKAPTSKITICPFK*SGLEKP
Trigger: AGGCTTCTCCAGGCCTGATCACTTGAACGGACATAT...GGTGATTTTGGAGGTTGGTGCCTTCCTGGGAACTAGCCACCAGCTTATCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR TCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTAAGTGTGCACCTGCTTaGTATGTCCGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPKCAPA*YVRSSD
Trigger: ATCACTTGAACGGACATATCAAGCAGGTGCACACTT...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTCAGGTCGCTGGCATCTaGGAGGTCACCATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGQVAGI*EVTIGV
Trigger: GACTCCTATGGTGACCTCTCAGATGCCAGCGACCTG...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp CCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTACTTCCCTGACCAGACTAAATCACGTAAGAACTaGAATTTGGGGTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PTFLVPNSIETPYFPDQTKSRKN*NLGWGC
Trigger: ACACCCCCACCCCAAATTTCAGTTCTTACGTGATTT...AGTCTGGTCAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGCCGCCGTTTTTGCGCTaGTGGTTCAGGTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LLPIKETGTGFALEAYVVPPFLR*WFRLCS
Trigger: GCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGG...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCAGCATGCTGCCGGCGATaGCATTGCTGTTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSACCRR*HCCWLP
Trigger: TGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGC...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGAATGCATGGAAGGATGCCTaGCTCCCTCAGGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TEVPEYHRFGYRIGVTKNAWKDA*LPQAPW
Trigger: CCAGGGGGCCTGAGGGAGGCAGGCATCCTTCCATGC...ATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGGGCAGATGTAAGGCTTaGCCACGGACCCATCATGGG +
Preference number: 4 (lower is better)
Translates to: LLPIKETGTGFALEAYVVGRCKA*PRTHHG
Trigger: CCCATGATGGGTCCGTGGGCAAGCCTTACATCTGCC...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTTCAGAAGTGTGCACCTaGTTGATATGTCCGTTCAAG +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPSEVCT*LICPFK
Trigger: CTTGAACGGACATATCAAGCAGGTGCACACTTCTGA...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACCCCAGTGTTGCTGGAGTGTaGTGGGCCCAGGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: RKKLGCYRGFQKGAPCYPSVAGV*WAQVFK
Trigger: CTTGAAAACCTGGGCCCAGCACACTCCAGCAACACT...GGGGTAGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTTTTGTTTTTGGGGACTaGCATGTCGCAGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPFVFGD*HVAGER
Trigger: TCTTTCTCCTGCGACATGGCAGTCCCCAAAAACAAA...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGCACAATGTCCCTACCTaGCGGCTGTCCCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: LLPIKETGTGFALEAYVVHNVPT*RLSHLP
Trigger: AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTG...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGGAATTCCAGCTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCACAATGTCCCTACCTaGCGGCTGTCCCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: RNSSFFPLKKLGLVLPWRHNVPT*RLSHLP
Trigger: AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTG...CCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAGCTGGAATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGTGGGAAGGGCAGAGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTGTTTGATGACTTCCTaGCAGATCTCGATAACCGAC +
Preference number: 4 (lower is better)
Translates to: SGKGRGQHGLTLVGIVPVCLMTS*QISITD
Trigger: GTCGGTTATCGAGATCTGCCAGGAAGTCATCAAACA...GACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCTCTGCCCTTCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp TTGGAGGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATACCAAGGCTGCCCCGTTaGTCATGTCCAAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LEAYVVFSAPVPYQVSLIPRLPR*SCPKGS
Trigger: GCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGG...TATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGAAAATCGGGGTCCAGCCACCATaGGCAAGCGGTCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PCPIPSLIDISAEYQMKIGVQPP*ASGPPQ
Trigger: CTGGGGTGGACCGCTTGCCCATGGTGGCTGGACCCC...GATTTTCATCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGTGCCACACTGGGGAATaGGGAAGTCAGCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LLPIKETGTGFALEAYVVCHTGE*GSQQLG
Trigger: CCCCAACTGCTGACTTCCCCATTCCCCAGTGTGGCA...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GTTCAAGTAGGACTTAGAGCGGAAGAAGCTCCCACATTCAGGGCATGGGTACTTTCAAGTGATCAGGCCTaGAGAAGCCTTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VQVGLRAEEAPTFRAWVLSSDQA*RSLSHS
Trigger: GCTGTGGGAAAGGCTTCTCCAGGCCTGATCACTTGA...AAGTACCCATGCCCTGAATGTGGGAGCTTCTTCCGCTCTAAGTCCTACTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR CCA 90 bp AGTGGGAAGGGCAGAGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTGGGTTGACTCTAGTTaGAATTGTGCCAGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SGKGRGQHGLTLVGIVPVWVDSS*NCASLL
Trigger: GAGAAGACTGGCACAATTCCAACTAGAGTCAACCCA...GACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCTCTGCCCTTCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp ATCACAAGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGGCAGACGGTCTCGGGTaGCAAAAGAAGCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: ITRSTWACSHVTQLRYTMADGLG*QKKHCR
Trigger: CCTGCAATGCTTCTTTTGCCACCCGAGACCGTCTGC...CATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTTACTTCCCACACACCTaGCAGGGCACCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: STWACSHVTQLRYTMSLPYFPHT*QGTLSS
Trigger: TGAAGACAAGGTGCCCTGCCAGGTGTGTGGGAAGTA...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GAGCTTGTCCTAGCAGTGAAAATGCTCGCCTCCAAGCAGGGCTCAGAAAGGTCTACTCCATTTTGTTTTTaGGGACTGCCATGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: ELVLAVKMLASKQGSERSTPFCF*GLPCRR
Trigger: CCTGCGACATGGCAGTCCCCAAAAACAAAATGGAGT...AGACCTTTCTGAGCCCTGCTTGGAGGCGAGCATTTTCACTGCTAGGACAAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGCCAGCAGTCCCCAGATaGTTGTTTCCGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: LLPIKETGTGFALEAYVVPAVPR*LFPWGH
Trigger: GTGTCCCCACGGAAACAACCATCTGGGGACTGCTGG...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CCCGAGAGCCCGGACATGCACCTTCTGGATGTGTTTGTTCAAGTAGGACTTAGAAGACCATTGGGAGAATaGGTGGTGGAGAAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PESPDMHLLDVFVQVGLRRPLGE*VVEKEL
Trigger: CAACTCCTTCTCCACCACCCATTCTCCCAATGGTCT...TCTAAGTCCTACTTGAACAAACACATCCAGAAGGTGCATGTCCGGGCTCTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR TCA 90 bp AGCCCCCAAAGCCATATATTGGGGTGGCCCAATATAAAGCTACTCATTAGTTTGCGCCCAACTGGGCGCTaGACACCGACTCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: SPQSHILGWPNIKLLISLRPTGR*TPTQST
Trigger: AGTACTTTGAGTCGGTGTTCAGCGCCCAGTTGGGCG...CAAACTAATGAGTAGCTTTATATTGGGCCACCCCAATATATGGCTTTGGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR TCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTATATGTCCGTTCAAGTaGTCAGGCCTGGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: STWACSHVTQLRYTMSLPICPFK*SGLEKP
Trigger: AGGCTTCTCCAGGCCTGATCACTTGAACGGACATAT...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp GTTCAAGTAGGACTTAGAGCGGAAGAAGCTCCCACATTCAGGGCATGGGTACTTGGGGTCACTAAGAATTaGGCACCAGGAATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VQVGLRAEEAPTFRAWVLGVTKN*APGIPA
Trigger: AGCTGGAATTCCTGGTGCTCAATTCTTAGTGACCCC...AAGTACCCATGCCCTGAATGTGGGAGCTTCTTCCGCTCTAAGTCCTACTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR TCA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTATATGGGAAGGGAGGATaGCGAACTAGAGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLYGKGG*RTREVG
Trigger: TCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCATA...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp GTTCAAGTAGGACTTAGAGCGGAAGAAGCTCCCACATTCAGGGCATGGGTACTTTATGGGAAGGGAGGATaGCGAACTAGAGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: VQVGLRAEEAPTFRAWVLYGKGG*RTREVG
Trigger: TCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCATA...AAGTACCCATGCCCTGAATGTGGGAGCTTCTTCCGCTCTAAGTCCTACTTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR TCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTCCAGGCAGAGGGCTaGGCTCAGGGGGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQLQAEG*AQGALG
Trigger: TCCAAGAGCCCCCTGAGCTCAGCCCTCTGCCTGGAG...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp ATCACAAGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGGGTGTCCTCAACAGCTaGGCTTGTCCTAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: ITRSTWACSHVTQLRYTMGVLNS*ACPSSE
Trigger: TTCACTGCTAGGACAAGCTCAGCTGTTGAGGACACC...CATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAAGCGCCCGCCGTTTTTaGGCTGCTGGTTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGISARRF*AAGSGC
Trigger: ACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCT...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTCCAAGCGCACCACGATaGGGGAAGTGTAGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: GLCSVFCPCPIPSLIDISPSAPR*GKCRRS
Trigger: ACTTCGCCTACACTTCCCGCATCGTGGTGCGCTTGG...AGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGAAAATCTGCTGGGCCTCGTGCTaGCGGAGCCGGTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: PCPIPSLIDISAEYQMKICWASC*RSRLAS
Trigger: TGATGCCAACCGGCTCCGGCAGCACGAGGCCCAGCA...GATTTTCATCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGCAGATGTAAGGCTTaGCCACGGACCCATCATGGG +
Preference number: 4 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGIGRCKA*PRTHHG
Trigger: CCCATGATGGGTCCGTGGGCAAGCCTTACATCTGCC...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGCCCCCAAAGCCATATATTGGGGTGGCCCAATATAAAGCTACTCATTAGTTTGTCACCCCGCAGAGTCTaGGGAGTGCTAAAGGGCACA +
Preference number: 4 (lower is better)
Translates to: SPQSHILGWPNIKLLISLSPRRV*GVLKGT
Trigger: TGTGCCCTTTAGCACTCCGCAGACTCTGCGGGGTGA...CAAACTAATGAGTAGCTTTATATTGGGCCACCCCAATATATGGCTTTGGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTTCCTGCAAACGCGCCTaGCACCTCCCCTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: SKQSLILTLMCDCGLQRASCKRA*HLPSRP
Trigger: CGGGCGGGAGGGGAGGTGGCAGGCGCGTTTGCAGGA...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TTGGAGGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATACCGAGAGCCCGGACATaGACCTTCTGGATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LEAYVVFSAPVPYQVSLIPRART*TFWMCL
Trigger: CAAACACATCCAGAAGGTGCATGTCCGGGCTCTCGG...TATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATATGGGGACACAGCAGCTaGCTCATTTCCCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGIWGHSS*LISLQA
Trigger: GGCCTGAAGGGAAATGAGGCAGCTGCTGTGTCCCCA...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGAATAGCTGCCTCCTCCTCTaGCTGCATGCTGCCGGCGAT +
Preference number: 4 (lower is better)
Translates to: TEVPEYHRFGYRIGVTKNSCLLL*LHAAGD
Trigger: ATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCT...ATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAAAGGCTTGGCCTGCAATaGCTGCACCAGCCGCCCGAG +
Preference number: 4 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQRLGLQ*LHQPPE
Trigger: CTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCCT...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGCAGGTTGGCCTTCCTTaGGCGGCCCCGGCCTCGCTT +
Preference number: 4 (lower is better)
Translates to: KQSLILTLMCDCGLQRALQVGLP*AAPASL
Trigger: AAGCGAGGCCGGGGCCGCCCAAGGAAGGCCAACCTG...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGCTACTCATTAGTTTaGTTCCTGAGCAGACCTGCT +
Preference number: 4 (lower is better)
Translates to: VDSSWNCASLLWRPTHSWSYSLV*FLSRPA
Trigger: AGCAGGTCTGCTCAGGAACCAAACTAATGAGTAGCT...CCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp ACCAACCTCCAAAATCACCTAGGCAAGGACAGATGCCCAGGGGTGCCATCTGTGAGCCATATATTGGGGTaGCCCAATATAAAGCTACTC +
Preference number: 4 (lower is better)
Translates to: TNLQNHLGKDRCPGVPSVSHILG*PNIKLL
Trigger: GAGTAGCTTTATATTGGGCCACCCCAATATATGGCT...CACAGATGGCACCCCTGGGCATCTGTCCTTGCCTAGGTGATTTTGGAGGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp ATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGGGCACTCTGCTTCTCTaGCGTCTTCAGGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: ITEVPEYHRFGYRIGVTKGTLLL*RLQVAG
Trigger: GCCAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCC...CTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGTGGGAGAATGGGTGGTaGAGAAGGAGTTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: LLPIKETGTGFALEAYVVWENGW*RRSWSG
Trigger: CCCACTCCAACTCCTTCTCCACCACCCATTCTCCCA...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ATGGGAAGGGAGGATGACGAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGACGAACTAGAGAAGTaGGAGGGGACCAAAATCACT +
Preference number: 4 (lower is better)
Translates to: MGREDDELEKWEGTKITEDELEK*EGTKIT
Trigger: AGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTC...CTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CCCTACCTGCCGGCTGTCCCACCTTCCTGGTTCCCAACAGCATTGAAACCCCCTCAACAGCATGTTGAATaGTTAAAATCACGTAAGAAC +
Preference number: 4 (lower is better)
Translates to: PYLPAVPPSWFPTALKPPQQHVE*LKSRKN
Trigger: GTTCTTACGTGATTTTAACCATTCAACATGCTGTTG...AGGGGGTTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGCCGGCAGGTAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp GGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTTGGGGACCCAAACATTaGGTCCAGCAGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GLCSVFCPCPIPSLIDISWGPKH*VQQVGL
Trigger: AAGGCCAACCTGCTGGACTCAATGTTTGGGTCCCCA...AGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp AGGAATTCCAGCTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGGCCGGTTGGCATCAGTaGACACCTTACCACATAGAC +
Preference number: 4 (lower is better)
Translates to: RNSSFFPLKKLGLVLPWRAGWHQ*TPYHID
Trigger: GTCTATGTGGTAAGGTGTTCACTGATGCCAACCGGC...CCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAGCTGGAATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp GAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATGCGGTCTTTTCTCTTaGACCGCAACCCACACACAG +
Preference number: 4 (lower is better)
Translates to: ELEKWEGTKITEVPEYHRCGLFS*TATHTQ
Trigger: CTGTGTGTGGGTTGCGGTTCAAGAGAAAAGACCGCA...TCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp GAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGAGGTGTCCTCAACAGCTaGGCTTGTCCTAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: ELEKWEGTKITEVPEYHRGVLNS*ACPSSE
Trigger: TTCACTGCTAGGACAAGCTCAGCTGTTGAGGACACC...TCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTGCTCACATGTGGGTGTCCTCAACAGCTaGGCTTGTCCTAGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SLIRSIHITRSTWACSHVGVLNS*ACPSSE
Trigger: TTCACTGCTAGGACAAGCTCAGCTGTTGAGGACACC...CACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGGAATTCCAGCTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGTCTCCGTGCTGTGTCTaGTCACCTGGTATGTGTAGC +
Preference number: 4 (lower is better)
Translates to: RNSSFFPLKKLGLVLPWRSPCCV*SPGMCS
Trigger: GCTACACATACCAGGTGAGCAGACACAGCACGGAGA...CCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAGCTGGAATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATCTCCGTGCTGTGTCTaGTCACCTGGTATGTGTAGC +
Preference number: 4 (lower is better)
Translates to: ELEKWEGTKITEVPEYHRSPCCV*SPGMCS
Trigger: GCTACACATACCAGGTGAGCAGACACAGCACGGAGA...TCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGAGCGCCCGCCGTTTTTaGGCTGCTGGTTCAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ITEVPEYHRFGYRIGVTKSARRF*AAGSGC
Trigger: ACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCT...CTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGAAAATCCCTCCTCTGGCTGCATaGTGCCGGCGATGCCATTGC +
Preference number: 4 (lower is better)
Translates to: PCPIPSLIDISAEYQMKIPPLAA*CRRCHC
Trigger: GCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGG...GATTTTCATCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGAATCAAAGAGGCTTGGCCTaGAATGGCTGCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TEVPEYHRFGYRIGVTKNQRGLA*NGCTSR
Trigger: GCGGCTGGTGCAGCCATTGCAGGCCAAGCCTCTTTG...ATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGTGGGAAGGGCAGAGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCAGAAAGAAACTTGGATaGTATAGGGGGTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SGKGRGQHGLTLVGIVPVRKKLG*YRGFQK
Trigger: TTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCT...GACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCTCTGCCCTTCCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR GCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTGCGCGAGCGAAGAGGTaGGCCCCTCCTGCAAACGCG +
Preference number: 4 (lower is better)
Translates to: SKQSLILTLMCDCGLQRAARAKR*APPANA
Trigger: CGCGTTTGCAGGAGGGGCGCACCTCTTCGCTCGCGC...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTGCTCACATGTGCTTCTTCAGGTGGTCTaGCATGTATGCTGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: SLIRSIHITRSTWACSHVLLQVV*HVCCPQ
Trigger: TTGCGGGCAGCATACATGGCAGACCACCTGAAGAAG...CACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGGCCCCTCGCTGTaGTTCTTCAGGTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQLGPSL*FFRWSA
Trigger: GGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAG...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTTCTGGCCTTCTTTGTTaGCATAGGTCCTGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGSGLLC*HRSWRS
Trigger: ACTGCGCCAGGACCTATGGCAACAAAGAAGGCCAGA...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266269.10
ENST00000405309.7
CDS-3UTR GCA 90 bp AGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGTCCTAGAGCCATTGGCACTCTaGTTCTCTGGCGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSVSPGIAFSSNSLQLVLEPLAL*FSGVFR
Trigger: CCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTC...TAGGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAACAGGCAAAGAGGCTTaGCCTGCAATGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGITGKEA*PAMAAP
Trigger: TGGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGT...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGCCCCCAAAGCCATATATTGGGGTGGCCCAATATAAAGCTACTCATTAGTTTGCACTGGATGCCACACTaGGGAATGGGGAAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SPQSHILGWPNIKLLISLHWMPH*GMGKSA
Trigger: TGCTGACTTCCCCATTCCCCAGTGTGGCATCCAGTG...CAAACTAATGAGTAGCTTTATATTGGGCCACCCCAATATATGGCTTTGGGGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CCA 90 bp GGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTCACTGGATGCCACACTaGGGAATGGGGAAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GLCSVFCPCPIPSLIDISHWMPH*GMGKSA
Trigger: TGCTGACTTCCCCATTCCCCAGTGTGGCATCCAGTG...AGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGTCCTACACTGGATGCCACACTaGGGAATGGGGAAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSVSPGIAFSSNSLQLVLHWMPH*GMGKSA
Trigger: TGCTGACTTCCCCATTCCCCAGTGTGGCATCCAGTG...TAGGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGGTGACACCGTGCTaGGCCTCGTGCTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SKQSLILTLMCDCGLQRALVTPC*ASCCRS
Trigger: GCTCCGGCAGCACGAGGCCCAGCACGGTGTCACCAG...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGGAATTCCAGCTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGTCAAGTGATCAGGCCTaGAGAAGCCTTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: RNSSFFPLKKLGLVLPWRSSDQA*RSLSHS
Trigger: GCTGTGGGAAAGGCTTCTCCAGGCCTGATCACTTGA...CCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAGCTGGAATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTTACTGCAGAAGTTGCTaGGCCCCTCGCTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLCSVFCPCPIPSLIDISYCRSC*APRCAS
Trigger: AGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTA...AGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAATGGTGCCTGGAGACCTaGGGAAGGGGAACACCGTGG +
Preference number: 4 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQWCLET*GRGTPW
Trigger: CCACGGTGTTCCCCTTCCCCAGGTCTCCAGGCACCA...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266269.10
CDS-3UTR CCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTATGTTGCCATAGGTCCTaGCGCAGTGGAACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLCCHRS*RSGTLL
Trigger: GAGCAGCGTTCCACTGCGCCAGGACCTATGGCAACA...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266269.10
ENST00000405309.7
CDS-3UTR CCA 90 bp ACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGAATGGCACTCTGCTTCTCTaGCGTCTTCAGGTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TEVPEYHRFGYRIGVTKNGTLLL*RLQVAG
Trigger: GCCAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCC...ATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGCCCACATTCAGGGCATaGGTACTTCTTCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: LLPIKETGTGFALEAYVVPTFRA*VLLLPI
Trigger: GATGGGGAGAAGAAGTACCCATGCCCTGAATGTGGG...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCAAGGACACTCACCCCATaGTCCATGGGATGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSRTLTP*SMGCFW
Trigger: CCAGAAGCATCCCATGGACCATGGGGTGAGTGTCCT...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTATCACAAGGTCAACCTaGGCTTGCTCACATGTGACA +
Preference number: 4 (lower is better)
Translates to: STWACSHVTQLRYTMSLPITRST*ACSHVT
Trigger: TGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp AGCCCAGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTAAGTGTGCACCTGCTTaGTATGTCCGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SPERNLDAIGGSRKVLLAKCAPA*YVRSSD
Trigger: ATCACTTGAACGGACATATCAAGCAGGTGCACACTT...AGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCTGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR TCA 90 bp CTAACATTTTTAATACAGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGCTCCAGGCAGAGGGCTaGGCTCAGGGGGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LTFLIQSDQINSHHKVNLLQAEG*AQGALG
Trigger: TCCAAGAGCCCCCTGAGCTCAGCCCTCTGCCTGGAG...CAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACTGTATTAAAAATGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATATGCTGGTTCAGGTTGTaGAGCATCTCCGTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGICWFRL*SISVLC
Trigger: ACACAGCACGGAGATGCTGCACAACCTGAACCAGCA...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CTAACATTTTTAATACAGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGTGCTGGGCCTCGTGCTaGCGGAGCCGGTTGGCATCA +
Preference number: 4 (lower is better)
Translates to: LTFLIQSDQINSHHKVNLCWASC*RSRLAS
Trigger: TGATGCCAACCGGCTCCGGCAGCACGAGGCCCAGCA...CAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACTGTATTAAAAATGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGCATCACGGAAGATCTTaGCGCAGATCTCACAAGCCA +
Preference number: 4 (lower is better)
Translates to: LLPIKETGTGFALEAYVVHHGRS*RRSHKP
Trigger: TGGCTTGTGAGATCTGCGGCAAGATCTTCCGTGATG...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTAGTGGTCTGCCATGTATaGTGCCCGCAAGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLVVCHV*CPQVLP
Trigger: GGGAAGTACTTGCGGGCAGCATACATGGCAGACCAC...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTAAGATACTGCAGAAGTTaGTGGGCCCCTCGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLRYCRS*WAPRCA
Trigger: AGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCT...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGTCCTACTCGGTTACAGATACTaGAGAAGTTGCTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SSVSPGIAFSSNSLQLVLLGYRY*RSCWAP
Trigger: AGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAG...TAGGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTACCCTAATGTGTGACTaGGGTTTACAAAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: STWACSHVTQLRYTMSLPTLMCD*GLQRAL
Trigger: CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGT...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CTAACATTTTTAATACAGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGCCGCCGTCGCCCAACTaGGCGCTGAACACCGACTCA +
Preference number: 4 (lower is better)
Translates to: LTFLIQSDQINSHHKVNLPPSPN*ALNTDS
Trigger: TGAGTCGGTGTTCAGCGCCCAGTTGGGCGACGGCGG...CAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACTGTATTAAAAATGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGAATCCAAGGCTGCCCCGTTaGTCATGTCCAAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TEVPEYHRFGYRIGVTKNPRLPR*SCPKGS
Trigger: GCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGG...ATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGTTGCCATAGGTCCTaGCGCAGTGGAACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: FSAPVPYQVSLIFLQNIRCCHRS*RSGTLL
Trigger: GAGCAGCGTTCCACTGCGCCAGGACCTATGGCAACA...TCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000266269.10
ENST00000405309.7
CDS-3UTR CCA 90 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTGCTCACATGTGAGACCATTGGGAGAATaGGTGGTGGAGAAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SLIRSIHITRSTWACSHVRPLGE*VVEKEL
Trigger: CAACTCCTTCTCCACCACCCATTCTCCCAATGGTCT...CACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGTCAACAGCATGTTGAATaGTTAAAATCACGTAAGAAC +
Preference number: 4 (lower is better)
Translates to: DTTEVHNVPTCRLSHLPGQQHVE*LKSRKN
Trigger: GTTCTTACGTGATTTTAACCATTCAACATGCTGTTG...ACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp ATGCCGACTGAACAATCTGAAACCCAAAGGACTCGAGGAGAGACATGTTCTGCTTTGTGCCGGTTAAGATaGTACACATCACGGAAGATC +
Preference number: 4 (lower is better)
Translates to: MPTEQSETQRTRGETCSALCRLR*YTSRKI
Trigger: GATCTTCCGTGATGTGTATCATCTTAACCGGCACAA...AGCAGAACATGTCTCTCCTCGAGTCCTTTGGGTTTCAGATTGTTCAGTCGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR TCA 90 bp AGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGTCCTAATATGTCCGTTCAAGTaGTCAGGCCTGGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SSVSPGIAFSSNSLQLVLICPFK*SGLEKP
Trigger: AGGCTTCTCCAGGCCTGATCACTTGAACGGACATAT...TAGGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp CCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGAAAATCCAGGTCGCTGGCATCTaGGAGGTCACCATAGGAGTC +
Preference number: 4 (lower is better)
Translates to: PCPIPSLIDISAEYQMKIQVAGI*EVTIGV
Trigger: GACTCCTATGGTGACCTCTCAGATGCCAGCGACCTG...GATTTTCATCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCAGGGGTCACTAAGAATTaGGCACCAGGAATTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSGVTKN*APGIPA
Trigger: AGCTGGAATTCCTGGTGCTCAATTCTTAGTGACCCC...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTATCTCCGTGCTGTGTCTaGTCACCTGGTATGTGTAGC +
Preference number: 4 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLSPCCV*SPGMCS
Trigger: GCTACACATACCAGGTGAGCAGACACAGCACGGAGA...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACCGCCGTTTTTGCGCTaGTGGTTCAGGTTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQPPFLR*WFRLCS
Trigger: GCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGG...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGAAAATCCCAAGCGCACCACGATaGGGGAAGTGTAGGCGAAGT +
Preference number: 4 (lower is better)
Translates to: PCPIPSLIDISAEYQMKIPSAPR*GKCRRS
Trigger: ACTTCGCCTACACTTCCCGCATCGTGGTGCGCTTGG...GATTTTCATCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGCCTCTGGCTGCATGCTaGCGGCGATGCCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: KQSLILTLMCDCGLQRALPLAAC*RRCHCC
Trigger: ACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGG...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGGGCCCCTCGCTGTaGTTCTTCAGGTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SKQSLILTLMCDCGLQRALGPSL*FFRWSA
Trigger: GGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAG...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTAACTGGGACTGGTTTTaGCTTGGAGGCCTATGTAGT +
Preference number: 4 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGNWDWF*LGGLCS
Trigger: ACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTT...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ATGCCGACTGAACAATCTGAAACCCAAAGGACTCGAGGAGAGACATGTTCTGCTTGTTTGATGACTTCCTaGCAGATCTCGATAACCGAC +
Preference number: 4 (lower is better)
Translates to: MPTEQSETQRTRGETCSACLMTS*QISITD
Trigger: GTCGGTTATCGAGATCTGCCAGGAAGTCATCAAACA...AGCAGAACATGTCTCTCCTCGAGTCCTTTGGGTTTCAGATTGTTCAGTCGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR CCA 90 bp TTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGACACTGGATGCCACACTaGGGAATGGGGAAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FSAPVPYQVSLIFLQNIRHWMPH*GMGKSA
Trigger: TGCTGACTTCCCCATTCCCCAGTGTGGCATCCAGTG...TCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGTCAAGTGATCAGGCCTaGAGAAGCCTTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: ITEVPEYHRFGYRIGVTKSSDQA*RSLSHS
Trigger: GCTGTGGGAAAGGCTTCTCCAGGCCTGATCACTTGA...CTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTAATTTCTAAAGACCATTaGGAGAATGGGTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLISKDH*ENGWWR
Trigger: TCTCCACCACCCATTCTCCCAATGGTCTTTAGAAAT...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TTGGAGGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATAGACGAACTAGAGAAGTaGGAGGGGACCAAAATCACT +
Preference number: 4 (lower is better)
Translates to: LEAYVVFSAPVPYQVSLIDELEK*EGTKIT
Trigger: AGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTC...TATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CCCATGGGCTGCTGGTCAACCTCAGGATCTACTAAAGATGACGCAAATGCCGACTTCCTTAAAAACAGTTaGGCATCCGCATTGTATAAG +
Preference number: 4 (lower is better)
Translates to: PMGCWSTSGSTKDDANADFLKNS*ASALYK
Trigger: CTTATACAATGCGGATGCCCAACTGTTTTTAAGGAA...GTCGGCATTTGCGTCATCTTTAGTAGATCCTGAGGTTGACCAGCAGCCCATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR CCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTATCACCCCATGGTCCATaGGATGCTTCTGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLSPHGP*DASGFL
Trigger: AAGGAAGCCAGAAGCATCCCATGGACCATGGGGTGA...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCTGTCCCACCTTCCTaGTTCCCAACAGCATTGAAA +
Preference number: 4 (lower is better)
Translates to: GLCSVFCPCPIPSLIDISAVPPS*FPTALK
Trigger: TTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGC...AGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp GAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGAATCACAAGGTCAACCTaGGCTTGCTCACATGTGACA +
Preference number: 4 (lower is better)
Translates to: ELEKWEGTKITEVPEYHRITRST*ACSHVT
Trigger: TGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT...TCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGGGCTCCTGGTGCCTaGAGACCTCGGTTACAGATA +
Preference number: 4 (lower is better)
Translates to: FSAPVPYQVSLIFLQNIRWAPGA*RPRLQI
Trigger: TATCTGTAACCGAGGTCTCCAGGCACCAGGAGCCCA...TCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR TCA 90 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTGCTCACATGTGTTGTGCCGGTTAAGATaGTACACATCACGGAAGATC +
Preference number: 4 (lower is better)
Translates to: SLIRSIHITRSTWACSHVLCRLR*YTSRKI
Trigger: GATCTTCCGTGATGTGTATCATCTTAACCGGCACAA...CACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp AGGAATTCCAGCTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGACTAACCCTAATGTGTaGCTGCGGTTTACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: RNSSFFPLKKLGLVLPWRTNPNV*LRFTKS
Trigger: GCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGT...CCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAGCTGGAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAATTGGAGCTGATAGTGTaGATCTCCAGCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQLELIV*ISSSRL
Trigger: CAGCCGGGAGCTGGAGATGCACACTATCAGCTCCAA...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGAAAATCTTGGAGCTGATAGTGTaGATCTCCAGCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PCPIPSLIDISAEYQMKILELIV*ISSSRL
Trigger: CAGCCGGGAGCTGGAGATGCACACTATCAGCTCCAA...GATTTTCATCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGATCTCACAAGCCACCTaGTTCCTGGTCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KQSLILTLMCDCGLQRALISQAT*FLVRLL
Trigger: GAGGAGCCGGACCAGGAAGCAGGTGGCTTGTGAGAT...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGAGTCTGCCATGTATGCTaGCCGCAAGTACTTCCCACA +
Preference number: 4 (lower is better)
Translates to: FSAPVPYQVSLIFLQNIRVCHVC*PQVLPT
Trigger: TGTGGGAAGTACTTGCGGGCAGCATACATGGCAGAC...TCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp ACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGAATCTCGGTTACAGATACTaGAGAAGTTGCTGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TEVPEYHRFGYRIGVTKNLGYRY*RSCWAP
Trigger: AGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAG...ATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAAGCAGACGGTCTCGGGTaGCAAAAGAAGCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQADGLG*QKKHCR
Trigger: CCTGCAATGCTTCTTTTGCCACCCGAGACCGTCTGC...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAATACTGCAGAAGTTGCTaGGCCCCTCGCTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQYCRSC*APRCAS
Trigger: AGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTA...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAAAGATGGTTGTTTCCGTaGGGACACAGCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQRWLFP*GHSSCL
Trigger: GAGGCAGCTGCTGTGTCCCCACGGAAACAACCATCT...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp ATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGGCTGTCCCACCTTCCTaGTTCCCAACAGCATTGAAA +
Preference number: 4 (lower is better)
Translates to: ITEVPEYHRFGYRIGVTKAVPPS*FPTALK
Trigger: TTTCAATGCTGTTGGGAACCAGGAAGGTGGGACAGC...CTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CAA 72 bp GATCAGATCAATTCACATCACAAGGTCAACCTGGGCTaGCTCACATGTGACACAACTGAGGTACACAATGTC +
Preference number: 4 (lower is better)
Translates to: DQINSHHKVNLG*LTCDTTEVHNV
Trigger: GACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp ACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGAATTATGGGAAGGGAGGATaGCGAACTAGAGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: TEVPEYHRFGYRIGVTKNYGKGG*RTREVG
Trigger: TCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCATA...ATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGTTGGAGCTGATAGTGTaGATCTCCAGCTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KQSLILTLMCDCGLQRALLELIV*ISSSRL
Trigger: CAGCCGGGAGCTGGAGATGCACACTATCAGCTCCAA...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGGAGCCATTGGCACTCTaGTTCTCTGGCGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KQSLILTLMCDCGLQRALEPLAL*FSGVFR
Trigger: CCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTC...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp GGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTTTTGTTTTTGGGGACTaGCATGTCGCAGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GLCSVFCPCPIPSLIDISFVFGD*HVAGER
Trigger: TCTTTCTCCTGCGACATGGCAGTCCCCAAAAACAAA...AGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGCCGAGAGCCCGGACATaGACCTTCTGGATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: KQSLILTLMCDCGLQRALPRART*TFWMCL
Trigger: CAAACACATCCAGAAGGTGCATGTCCGGGCTCTCGG...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCAACCCTAATGTGTGACTaGGGTTTACAAAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSTLMCD*GLQRAL
Trigger: CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGT...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCATGTTTGATGACTTCCTaGCAGATCTCGATAACCGAC +
Preference number: 4 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSCLMTS*QISITD
Trigger: GTCGGTTATCGAGATCTGCCAGGAAGTCATCAAACA...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGAAAATCTACTTCCCACACACCTaGCAGGGCACCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PCPIPSLIDISAEYQMKIYFPHT*QGTLSS
Trigger: TGAAGACAAGGTGCCCTGCCAGGTGTGTGGGAAGTA...GATTTTCATCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTAACTCCATTTTGTTTTTaGGGACTGCCATGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLTPFCF*GLPCRR
Trigger: CCTGCGACATGGCAGTCCCCAAAAACAAAATGGAGT...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCCAGCAGTCCCCAGATaGTTGTTTCCGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: SKQSLILTLMCDCGLQRAPAVPR*LFPWGH
Trigger: GTGTCCCCACGGAAACAACCATCTGGGGACTGCTGG...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CAA 72 bp CTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATaGGGGTCACTAAGAATTGAGCACCAGGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: LRSQNIIDLGIG*GSLRIEHQEFQ
Trigger: CTGGAATTCCTGGTGCTCAATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTGGCCGCTCAGAAGTGTaGACCTGCTTGATATGTCCG +
Preference number: 4 (lower is better)
Translates to: SKQSLILTLMCDCGLQRAGRSEV*TCLICP
Trigger: CGGACATATCAAGCAGGTGCACACTTCTGAGCGGCC...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGTCTGGCCTTCTTTGTTaGCATAGGTCCTGGCGCAGT +
Preference number: 4 (lower is better)
Translates to: KQSLILTLMCDCGLQRALSGLLC*HRSWRS
Trigger: ACTGCGCCAGGACCTATGGCAACAAAGAAGGCCAGA...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266269.10
ENST00000405309.7
CDS-3UTR CCA 90 bp TTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGAATCACAAGGTCAACCTaGGCTTGCTCACATGTGACA +
Preference number: 4 (lower is better)
Translates to: FSAPVPYQVSLIFLQNIRITRST*ACSHVT
Trigger: TGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT...TCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
3UTR CAA 72 bp GGACCAAAATCACTGAGGTCCCAGAATATCATAGATTaGGGTATAGGATTGGGGTCACTAAGAATTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GPKSLRSQNIID*GIGLGSLRIEH
Trigger: GTGCTCAATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp ACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGAATACTAACCCTAATGTGTaGCTGCGGTTTACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: TEVPEYHRFGYRIGVTKNTNPNV*LRFTKS
Trigger: GCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGT...ATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CTAACATTTTTAATACAGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGTCTGCCATGTATGCTaGCCGCAAGTACTTCCCACA +
Preference number: 4 (lower is better)
Translates to: LTFLIQSDQINSHHKVNLVCHVC*PQVLPT
Trigger: TGTGGGAAGTACTTGCGGGCAGCATACATGGCAGAC...CAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACTGTATTAAAAATGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGAGGTCAACCTGGGCTTaGTCACATGTGACACAACTG +
Preference number: 4 (lower is better)
Translates to: KQSLILTLMCDCGLQRALRSTWA*SHVTQL
Trigger: CAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGTTTGATGACTTCCTaGCAGATCTCGATAACCGAC +
Preference number: 4 (lower is better)
Translates to: FSAPVPYQVSLIFLQNIRCLMTS*QISITD
Trigger: GTCGGTTATCGAGATCTGCCAGGAAGTCATCAAACA...TCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTTACTTCCCACACACCTaGCAGGGCACCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SKQSLILTLMCDCGLQRAYFPHT*QGTLSS
Trigger: TGAAGACAAGGTGCCCTGCCAGGTGTGTGGGAAGTA...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CTAACATTTTTAATACAGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGCCCACATTCAGGGCATaGGTACTTCTTCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: LTFLIQSDQINSHHKVNLPTFRA*VLLLPI
Trigger: GATGGGGAGAAGAAGTACCCATGCCCTGAATGTGGG...CAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACTGTATTAAAAATGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTAATTTCTAAAGACCATTaGGAGAATGGGTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLISKDH*ENGWWR
Trigger: TCTCCACCACCCATTCTCCCAATGGTCTTTAGAAAT...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTGCTCACATGTGTTCCTTAAAAACAGTTaGGCATCCGCATTGTATAAG +
Preference number: 4 (lower is better)
Translates to: SLIRSIHITRSTWACSHVFLKNS*ASALYK
Trigger: CTTATACAATGCGGATGCCCAACTGTTTTTAAGGAA...CACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR TCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAATTGTGCCGGTTAAGATaGTACACATCACGGAAGATC +
Preference number: 4 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQLCRLR*YTSRKI
Trigger: GATCTTCCGTGATGTGTATCATCTTAACCGGCACAA...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp CTAACATTTTTAATACAGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGCATCACGGAAGATCTTaGCGCAGATCTCACAAGCCA +
Preference number: 4 (lower is better)
Translates to: LTFLIQSDQINSHHKVNLHHGRS*RRSHKP
Trigger: TGGCTTGTGAGATCTGCGGCAAGATCTTCCGTGATG...CAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACTGTATTAAAAATGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAATGGCAAAAGAAGCATTaGAGGTCTGACACTTGTGAG +
Preference number: 4 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQWQKKH*RSDTCE
Trigger: CTCACAAGTGTCAGACCTGCAATGCTTCTTTTGCCA...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTAGGTCAACCTGGGCTTaGTCACATGTGACACAACTG +
Preference number: 4 (lower is better)
Translates to: SKQSLILTLMCDCGLQRARSTWA*SHVTQL
Trigger: CAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp CTAACATTTTTAATACAGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGAGACCATTGGGAGAATaGGTGGTGGAGAAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LTFLIQSDQINSHHKVNLRPLGE*VVEKEL
Trigger: CAACTCCTTCTCCACCACCCATTCTCCCAATGGTCT...CAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACTGTATTAAAAATGTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGGACGAACTAGAGAAGTaGGAGGGGACCAAAATCACT +
Preference number: 4 (lower is better)
Translates to: KQSLILTLMCDCGLQRALDELEK*EGTKIT
Trigger: AGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTC...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGTCAGAAGTGTGCACCTaGTTGATATGTCCGTTCAAG +
Preference number: 4 (lower is better)
Translates to: KQSLILTLMCDCGLQRALSEVCT*LICPFK
Trigger: CTTGAACGGACATATCAAGCAGGTGCACACTTCTGA...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTAACTGGGACTGGTTTTaGCTTGGAGGCCTATGTAGT +
Preference number: 4 (lower is better)
Translates to: SKQSLILTLMCDCGLQRANWDWF*LGGLCS
Trigger: ACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTT...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTTGGCAAAAGAAGCATTaGAGGTCTGACACTTGTGAG +
Preference number: 4 (lower is better)
Translates to: SKQSLILTLMCDCGLQRAWQKKH*RSDTCE
Trigger: CTCACAAGTGTCAGACCTGCAATGCTTCTTTTGCCA...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR GCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTACCCTAATGTGTGACTaGGGTTTACAAAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SKQSLILTLMCDCGLQRATLMCD*GLQRAL
Trigger: CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGT...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CCA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTTTCCTTAAAAACAGTTaGGCATCCGCATTGTATAAG +
Preference number: 4 (lower is better)
Translates to: SKQSLILTLMCDCGLQRAFLKNS*ASALYK
Trigger: CTTATACAATGCGGATGCCCAACTGTTTTTAAGGAA...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 90 bp TGGCTGCACCAGCCGCCCGAGCTGCCTCCTCCTCTGGCTGCATGCTaGCGGCGATGCCATTGCTGTTGGCTGCCAAGGCTGCCCCGTTGG +
Preference number: 5 (lower is better)
Translates to: WLHQPPELPPPLAAC*RRCHCCWLPRLPRW
Trigger: CCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS TCA 90 bp CCAGCCTCGGAGGAGGAAGGTCGATGTAGCCCAGCTGGAGGCTGGTaGCACCGTGCTGGGCCTCGTGCTGCCGGAGCCGGTTGGCATCAG +
Preference number: 5 (lower is better)
Translates to: PASEEEGRCSPAGGW*HRAGPRAAGAGWHQ
Trigger: CTGATGCCAACCGGCTCCGGCAGCACGAGGCCCAGCACGGTGTCACCAGCCTCCAGCTGGGCTACATCGACCTTCCTCCTCCGAGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 90 bp CAATGGCTGCACCAGCCGCCCGAGCTGCCTCCTCCTCTGGCTGCATaGTGCCGGCGATGCCATTGCTGTTGGCTGCCAAGGCTGCCCCGT +
Preference number: 5 (lower is better)
Translates to: QWLHQPPELPPPLAA*CRRCHCCWLPRLPR
Trigger: ACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 90 bp CCTGCAATGGCTGCACCAGCCGCCCGAGCTGCCTCCTCCTCTGGCTaGATGCTGCCGGCGATGCCATTGCTGTTGGCTGCCAAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PAMAAPAARAASSSG*MLPAMPLLLAAKAA
Trigger: GGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATTGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 90 bp CAGCCGCCCGAGCTGCCTCCTCCTCTGGCTGCATGCTGCCGGCGATaGCATTGCTGTTGGCTGCCAAGGCTGCCCCGTTGGTCATGTCCA +
Preference number: 5 (lower is better)
Translates to: QPPELPPPLAACCRR*HCCWLPRLPRWSCP
Trigger: TGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 90 bp TTGGCCTGCAATGGCTGCACCAGCCGCCCGAGCTGCCTCCTCCTCTaGCTGCATGCTGCCGGCGATGCCATTGCTGTTGGCTGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: LACNGCTSRPSCLLL*LHAAGDAIAVGCQG
Trigger: GCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 90 bp AGCGGTCCACCCCAGGTAACACAGGCAAAGAGGCTTGGCCTGCAATaGCTGCACCAGCCGCCCGAGCTGCCTCCTCCTCTGGCTGCATGC +
Preference number: 5 (lower is better)
Translates to: SGPPQVTQAKRLGLQ*LHQPPELPPPLAAC
Trigger: GCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGTGTTACCTGGGGTGGACCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 90 bp CCCGAGCTGCCTCCTCCTCTGGCTGCATGCTGCCGGCGATGCCATTaGTGTTGGCTGCCAAGGCTGCCCCGTTGGTCATGTCCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: PELPPPLAACCRRCH*CWLPRLPRWSCPKG
Trigger: TCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 90 bp AGGCAAAGAGGCTTGGCCTGCAATGGCTGCACCAGCCGCCCGAGCTaGCTCCTCCTCTGGCTGCATGCTGCCGGCGATGCCATTGCTGTT +
Preference number: 5 (lower is better)
Translates to: RQRGLACNGCTSRPS*LLLWLHAAGDAIAV
Trigger: AACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 90 bp ACCATGGGCAAGCGGTCCACCCCAGGTAACACAGGCAAAGAGGCTTaGCCTGCAATGGCTGCACCAGCCGCCCGAGCTGCCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: TMGKRSTPGNTGKEA*PAMAAPAARAASSS
Trigger: AGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGTGTTACCTGGGGTGGACCGCTTGCCCATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 90 bp CGTCGCCTACCCGCAAGAGCACGTCGCAGAAGCGCCCGCCGTTTTTaGGCTGCTGGTTCAGGTTGTGCAGCATCTCCGTGCTGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: RRLPARARRRSARRF*AAGSGCAASPCCVC
Trigger: GCAGACACAGCACGGAGATGCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCTTCTGCGACGTGCTCTTGCGGGTAGGCGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 90 bp TGGCTGCATGCTGCCGGCGATGCCATTGCTGTTGGCTGCCAAGGCTaGCCCGTTGGTCATGTCCAAAGGGAAGCCCAAGTCCGAGGTCCC +
Preference number: 5 (lower is better)
Translates to: WLHAAGDAIAVGCQG*PVGHVQREAQVRGP
Trigger: GGGACCTCGGACTTGGGCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 90 bp CTGCCTCCTCCTCTGGCTGCATGCTGCCGGCGATGCCATTGCTGTTaGCTGCCAAGGCTGCCCCGTTGGTCATGTCCAAAGGGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: LPPPLAACCRRCHCC*LPRLPRWSCPKGSP
Trigger: TGGGCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 90 bp TCCTGGTCCGGCTCCTCTTTCGGGGGCCGTCGGGGTCTTCAGAGATaGGTAGCCCATTCTCACCCAGCCTCGGAGGAGGAAGGTCGATGT +
Preference number: 5 (lower is better)
Translates to: SWSGSSFGGRRGLQR*VAHSHPASEEEGRC
Trigger: ACATCGACCTTCCTCCTCCGAGGCTGGGTGAGAATGGGCTACCCATCTCTGAAGACCCCGACGGCCCCCGAAAGAGGAGCCGGACCAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 90 bp CCTGAGCAGGTGGGCAGGGGCTGCCTGACCGGTAAGACTGGTTCCTaGTCGGGGCCCTCTGAGGGAGTTCTCCATCCCTGTGTTCACACA +
Preference number: 5 (lower is better)
Translates to: PEQVGRGCLTGKTGS*SGPSEGVLHPCVHT
Trigger: TGTGTGAACACAGGGATGGAGAACTCCCTCAGAGGGCCCCGACCAGGAACCAGTCTTACCGGTCAGGCAGCCCCTGCCCACCTGCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465287.1
CDS GCA 90 bp CCTACCCGCAAGAGCACGTCGCAGAAGCGCCCGCCGTTTTTGCGCTaGTGGTTCAGGTTGTGCAGCATCTCCGTGCTGTGTCTGCTCACC +
Preference number: 5 (lower is better)
Translates to: PTRKSTSQKRPPFLR*WFRLCSISVLCLLT
Trigger: GGTGAGCAGACACAGCACGGAGATGCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCTTCTGCGACGTGCTCTTGCGGGTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 90 bp CTCCTCCTCTGGCTGCATGCTGCCGGCGATGCCATTGCTGTTGGCTaGCAAGGCTGCCCCGTTGGTCATGTCCAAAGGGAAGCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: LLLWLHAAGDAIAVG*QGCPVGHVQREAQV
Trigger: GACTTGGGCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 90 bp ACCCGCAAGAGCACGTCGCAGAAGCGCCCGCCGTTTTTGCGCTGCTaGTTCAGGTTGTGCAGCATCTCCGTGCTGTGTCTGCTCACCTGG +
Preference number: 5 (lower is better)
Translates to: TRKSTSQKRPPFLRC*FRLCSISVLCLLTW
Trigger: CCAGGTGAGCAGACACAGCACGGAGATGCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCTTCTGCGACGTGCTCTTGCGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS TCA 90 bp GCCCGCAAGTACTTCCCACACACCTGGCAGGGCACCTTGTCTTCATaGCAGGCCAGGTGGGAGCGCAGACGGTCTCGGGTGGCAAAAGAA +
Preference number: 5 (lower is better)
Translates to: ARKYFPHTWQGTLSS*QARWERRRSRVAKE
Trigger: TTCTTTTGCCACCCGAGACCGTCTGCGCTCCCACCTGGCCTGTCATGAAGACAAGGTGCCCTGCCAGGTGTGTGGGAAGTACTTGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
ENST00000494109.1
CDS GCA 90 bp GCTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTGCCATGTATGCTaGCCGCAAGTACTTCCCACACACCTGGCAGGGCACCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: AGPLAVLLQVVCHVC*PQVLPTHLAGHLVF
Trigger: GAAGACAAGGTGCCCTGCCAGGTGTGTGGGAAGTACTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
ENST00000494109.1
CDS GCA 90 bp GTTGCTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTGCCATGTATaGTGCCCGCAAGTACTTCCCACACACCTGGCAGGGCACCTTGTC +
Preference number: 5 (lower is better)
Translates to: VAGPLAVLLQVVCHV*CPQVLPTHLAGHLV
Trigger: GACAAGGTGCCCTGCCAGGTGTGTGGGAAGTACTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
ENST00000494109.1
CDS CCA 90 bp CATCACGGAAGATCTTGCCGCAGATCTCACAAGCCACCTGCTTCCTaGTCCGGCTCCTCTTTCGGGGGCCGTCGGGGTCTTCAGAGATGG +
Preference number: 5 (lower is better)
Translates to: HHGRSCRRSHKPPAS*SGSSFGGRRGLQRW
Trigger: CCATCTCTGAAGACCCCGACGGCCCCCGAAAGAGGAGCCGGACCAGGAAGCAGGTGGCTTGTGAGATCTGCGGCAAGATCTTCCGTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp ACAGCAGCTGCCTCATTTCCCTTCAGGCCCCATGGGCTGCTGGTCAACCTCAGGCACAGGCAAAGAGGCTaGGCCTGCAATGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: TAAASFPFRPHGLLVNLRHRQRG*ACNGCT
Trigger: GGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGTG...CCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAATGAGGCAGCTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR CAA 90 bp ATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGTGGGGCAGAAGAGAGTGTaGCTGGAGTGTGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: IVPVFSGGRLTRGVGKGVGQKRV*LECAGP
Trigger: GGGCCCAGCACACTCCAGCAACACTCTCTTCTGCCC...CACCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS GCA 90 bp ACTGCAGAAGTTGCTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTaGCATGTATGCTGCCCGCAAGTACTTCCCACACACCTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: TAEVAGPLAVLLQVV*HVCCPQVLPTHLAG
Trigger: CCCTGCCAGGTGTGTGGGAAGTACTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
ENST00000494109.1
CDS GCA 90 bp TTTCTGGCCTTCTTTGTTGCCATAGGTCCTGGCGCAGTGGAACGCTaGTCCCCCATTCAGGATGGGCTCCTGGTGCCTGGAGACCTCGGT +
Preference number: 5 (lower is better)
Translates to: FLAFFVAIGPGAVER*SPIQDGLLVPGDLG
Trigger: ACCGAGGTCTCCAGGCACCAGGAGCCCATCCTGAATGGGGGAGCAGCGTTCCACTGCGCCAGGACCTATGGCAACAAAGAAGGCCAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR CAA 90 bp GAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGAAGCGCCCGCCGTTTTaGCGCTGCTGGTTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: ELCQSSLEADSLVEWGKGKRPPF*RCWFRL
Trigger: CAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCTT...CCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS GCA 90 bp TTTTGCGCTGCTGGTTCAGGTTGTGCAGCATCTCCGTGCTGTGTCTaGTCACCTGGTATGTGTAGCAGCCAGACGGGCCGCACGAAGCGT +
Preference number: 5 (lower is better)
Translates to: FCAAGSGCAASPCCV*SPGMCSSQTGRTKR
Trigger: ACGCTTCGTGCGGCCCGTCTGGCTGCTACACATACCAGGTGAGCAGACACAGCACGGAGATGCTGCACAACCTGAACCAGCAGCGCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp TGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGCGCTGCTGGTTCAGGTaGTGCAGCATCTCCGTGCTG +
Preference number: 5 (lower is better)
Translates to: WNCASLLWRPTHSWSGERRCWFR*CSISVL
Trigger: CAGCACGGAGATGCTGCACAACCTGAACCAGCAGCG...CCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp ACAGAACCCAAACATCACTTCCCTCCGCATTCACAGCATTTCCCAGCAGTCCCCGCGATGCCATTGCTGTaGGCTGCCAAGGCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: TEPKHHFPPHSQHFPAVPAMPLL*AAKAAP
Trigger: CGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGC...GGGGACTGCTGGGAAATGCTGTGAATGCGGAGGGAAGTGATGTTTGGGTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp TCACATGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCCTGCCGGCGATGCCATaGCTGTTGGCTGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: SHVTQLRYTMSLPAGCPTLPAMP*LLAAKA
Trigger: AGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAG...GGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 90 bp CCTGCCTCAGATATCCCGGCGGGGCTGGGCAGAAGAGAGTGTTGCTaGAGTGTGCTGGGCCCAGGTTTTCAAGGGCTGGGAATGATTTTT +
Preference number: 5 (lower is better)
Translates to: PASDIPAGLGRRECC*SVLGPGFQGLGMIF
Trigger: AAAAATCATTCCCAGCCCTTGAAAACCTGGGCCCAGCACACTCCAGCAACACTCTCTTCTGCCCAGCCCCGCCGGGATATCTGAGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215919.3
ENST00000465287.1
CDS CCA 90 bp CAGATACTGCAGAAGTTGCTGGGCCCCTCGCTGTGCTTCTTCAGGTaGTCTGCCATGTATGCTGCCCGCAAGTACTTCCCACACACCTGG +
Preference number: 5 (lower is better)
Translates to: QILQKLLGPSLCFFR*SAMYAARKYFPHTW
Trigger: CCAGGTGTGTGGGAAGTACTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
ENST00000494109.1
CDS CCA 90 bp CTCCTGGTGCCTGGAGACCTCGGTTACAGATACTGCAGAAGTTGCTaGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTGCCATGTATGCTG +
Preference number: 5 (lower is better)
Translates to: LLVPGDLGYRYCRSC*APRCASSGGLPCML
Trigger: CAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTCTCCAGGCACCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR CAA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTCGCTGCTGGTTCAGGTaGTGCAGCATCTCCGTGCTG +
Preference number: 5 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPRCWFR*CSISVL
Trigger: CAGCACGGAGATGCTGCACAACCTGAACCAGCAGCG...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp TGTGACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGCCAAGGCTGCCCCGTaGGTCATGTCCAAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: CDTTEVHNVPTCRLSHLPAKAAP*VMSKGK
Trigger: CTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGC...AGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp ATGGGAAGGGAGGATGACGAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGCGATGCCATTGCTGTaGGCTGCCAAGGCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: MGREDDELEKWEGTKITEAMPLL*AAKAAP
Trigger: CGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGC...CTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS TCA 90 bp ATCATTCAGTGGGAAGTAGGGGGTGGCTGTGCAAAGAGTGGAGTCTaGGGCAGGGTGATTGAGACACCCCTAGGCCTCCCATACACGCTC +
Preference number: 5 (lower is better)
Translates to: IIQWEVGGGCAKSGV*GRVIETPLGLPYTL
Trigger: GAGCGTGTATGGGAGGCCTAGGGGTGTCTCAATCACCCTGCCTCAGACTCCACTCTTTGCACAGCCACCCCCTACTTCCCACTGAATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS-3UTR CAA 90 bp AAGGGCACACCAATAAGGATCCGAGGGAGGGGGTCTACATCTGCTTTTTCAGCCGCCAAGGCTGCCCCGTaGGTCATGTCCAAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: KGTPIRIRGRGSTSAFSAAKAAP*VMSKGK
Trigger: CTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGC...GGCTGAAAAAGCAGATGTAGACCCCCTCCCTCGGATCCTTATTGGTGTGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp AGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACCCCGCGATGCCATTGCTGTaGGCTGCCAAGGCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: RKKLGCYRGFQKGAPCYPAMPLL*AAKAAP
Trigger: CGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGC...GGGGTAGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp ATGGGAAGGGAGGATGACGAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGCTGCCGGCGATGCCATaGCTGTTGGCTGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: MGREDDELEKWEGTKITELPAMP*LLAAKA
Trigger: AGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAG...CTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AAGGGCACACCAATAAGGATCCGAGGGAGGGGGTCTACATCTGCTTTTTCAGCCCACAGGCAAAGAGGCTaGGCCTGCAATGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: KGTPIRIRGRGSTSAFSAHRQRG*ACNGCT
Trigger: GGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGTG...GGCTGAAAAAGCAGATGTAGACCCCCTCCCTCGGATCCTTATTGGTGTGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp AGGGCAGCATGGGTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGTGCTGCCGGAGCCGGTaGGCATCAGTGAACACCTTA +
Preference number: 5 (lower is better)
Translates to: RAAWVDSSWNCASLLWRPCCRSR*ASVNTL
Trigger: TAAGGTGTTCACTGATGCCAACCGGCTCCGGCAGCA...CGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAACCCATGCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp GACACAACTGAGGTACACAATGTCCCTACCTGCCGGCTGTCCCACCTTCCTGGTCAGGAGAAAGAGCCATaGGCACTCTGCTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: DTTEVHNVPTCRLSHLPGQEKEP*ALCFSG
Trigger: GCCAGAGAAGCAGAGTGCCAATGGCTCTTTCTCCTG...ACCAGGAAGGTGGGACAGCCGGCAGGTAGGGACATTGTGTACCTCAGTTGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS TCA 90 bp GCCATTGGCACTCTGCTTCTCTGGCGTCTTCAGGTCGCTGGCATCTaGGAGGTCACCATAGGAGTCAGAGCTCTCAATCGGATCCTGATG +
Preference number: 5 (lower is better)
Translates to: AIGTLLLWRLQVAGI*EVTIGVRALNRILM
Trigger: CATCAGGATCCGATTGAGAGCTCTGACTCCTATGGTGACCTCTCAGATGCCAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 90 bp CCTTCTCGGTTACAGATACTGCAGAAGTTGCTGGGCCCCTCGCTGTaGTTCTTCAGGTGGTCTGCCATGTATGCTGCCCGCAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: PSRLQILQKLLGPSL*FFRWSAMYAARKYF
Trigger: GAAGTACTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351933.8
CDS GCA 90 bp AGACCTCGGTTACAGATACTGCAGAAGTTGCTGGGCCCCTCGCTGTaGTTCTTCAGGTGGTCTGCCATGTATGCTGCCCGCAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: RPRLQILQKLLGPSL*FFRWSAMYAARKYF
Trigger: GAAGTACTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS CCA 90 bp GCAGGGGGTACCAGGATCTGTACGTTGGACTGTTTGATGACTTCCTaGCAGATCTCGATAACCGACCTCATCAGCAGGAACTTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: AGGTRICTLDCLMTS*QISITDLISRNLAA
Trigger: GGCCGCCAAGTTCCTGCTGATGAGGTCGGTTATCGAGATCTGCCAGGAAGTCATCAAACAGTCCAACGTACAGATCCTGGTACCCCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 90 bp AGGAGGCAGAGGAGAAACCTCGGTTACAGATACTGCAGAAGTTGCTaGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTGCCATGTATGCTG +
Preference number: 5 (lower is better)
Translates to: RRQRRNLGYRYCRSC*APRCASSGGLPCML
Trigger: CAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTTTCTCCTCTGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266269.10
CDS CCA 90 bp CCTCCCATACACGCTCAGGCCCATCCTCTGGAAGTGAGGAAACAGTaGGCAGATTACCTCGGTTACAGATACTGCAGAAGTTGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PPIHAQAHPLEVRKQ*ADYLGYRYCRSCWA
Trigger: GGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTAATCTGCCCACTGTTTCCTCACTTCCAGAGGATGGGCCTGAGCGTGTATGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS-3UTR CAA 90 bp ATGGGAAGGGAGGATGACGAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGCGCTGCTGGTTCAGGTaGTGCAGCATCTCCGTGCTG +
Preference number: 5 (lower is better)
Translates to: MGREDDELEKWEGTKITERCWFR*CSISVL
Trigger: CAGCACGGAGATGCTGCACAACCTGAACCAGCAGCG...CTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACCCCCTGCCGGCGATGCCATaGCTGTTGGCTGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: RKKLGCYRGFQKGAPCYPLPAMP*LLAAKA
Trigger: AGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAG...GGGGTAGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACTGCCGGCGATGCCATaGCTGTTGGCTGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLLPAMP*LLAAKA
Trigger: AGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAG...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp ATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGTGAGCCCAGAAAGAAACTaGGATGCTATAGGGGGTTCC +
Preference number: 5 (lower is better)
Translates to: IVPVFSGGRLTRGVGKGVSPERN*DAIGGS
Trigger: GGAACCCCCTATAGCATCCAAGTTTCTTTCTGGGCT...CACCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp ATGGGAAGGGAGGATGACGAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGCAGTCCCCAGATGGTaGTTTCCGTGGGGACACAGC +
Preference number: 5 (lower is better)
Translates to: MGREDDELEKWEGTKITEAVPRW*FPWGHS
Trigger: GCTGTGTCCCCACGGAAACAACCATCTGGGGACTGC...CTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTCGTCATCCTCCCTTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS TCA 90 bp ACACCCCTAGGCCTCCCATACACGCTCAGGCCCATCCTCTGGAAGTaGGGAAACAGTGGGCAGATTACCTCGGTTACAGATACTGCAGAA +
Preference number: 5 (lower is better)
Translates to: TPLGLPYTLRPILWK*GNSGQITSVTDTAE
Trigger: TTCTGCAGTATCTGTAACCGAGGTAATCTGCCCACTGTTTCCTCACTTCCAGAGGATGGGCCTGAGCGTGTATGGGAGGCCTAGGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS GCA 90 bp AAACCTCGGTTACAGATACTGCAGAAGTTGCTGGGCCCCTCGCTGTaGTTCTTCAGGTGGTCTGCCATGTATGCTGCCCGCAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: KPRLQILQKLLGPSL*FFRWSAMYAARKYF
Trigger: GAAGTACTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266269.10
CDS GCA 90 bp AGTAGGAGGCAGAGGAGAAACCTCGGTTACAGATACTGCAGAAGTTaGTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTGCCATGTATG +
Preference number: 5 (lower is better)
Translates to: SRRQRRNLGYRYCRS*WAPRCASSGGLPCM
Trigger: CATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTTTCTCCTCTGCCTCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266269.10
CDS GCA 90 bp TTACCTCGGTTACAGATACTGCAGAAGTTGCTGGGCCCCTCGCTGTaGTTCTTCAGGTGGTCTGCCATGTATGCTGCCCGCAAGTACTTC +
Preference number: 5 (lower is better)
Translates to: LPRLQILQKLLGPSL*FFRWSAMYAARKYF
Trigger: GAAGTACTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS GCA 90 bp CTGGAAGTGAGGAAACAGTGGGCAGATTACCTCGGTTACAGATACTaGAGAAGTTGCTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTG +
Preference number: 5 (lower is better)
Translates to: LEVRKQWADYLGYRY*RSCWAPRCASSGGL
Trigger: CAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTAATCTGCCCACTGTTTCCTCACTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS CCA 90 bp GTGAGCATTTCTGGCCTTCTCGGTTACAGATACTGCAGAAGTTGCTaGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTGCCATGTATGCTG +
Preference number: 5 (lower is better)
Translates to: VSISGLLGYRYCRSC*APRCASSGGLPCML
Trigger: CAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGAAGGCCAGAAATGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351933.8
CDS-3UTR CAA 90 bp GAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGATGTCCCCAAATACCTaGGAGCTGATAGTGTGCATC +
Preference number: 5 (lower is better)
Translates to: ELCQSSLEADSLVEWGKGMSPNT*ELIVCI
Trigger: GATGCACACTATCAGCTCCAAGGTATTTGGGGACAT...CCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp GAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAGTGGGGAAAGGGGTGTACGTTGGACTGTTaGATGACTTCCTGGCAGATC +
Preference number: 5 (lower is better)
Translates to: ELCQSSLEADSLVEWGKGCTLDC*MTSWQI
Trigger: GATCTGCCAGGAAGTCATCAAACAGTCCAACGTACA...CCCCTTTCCCCACTCCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp CCAGGAAGGCACCAACCTCCAAAATCACCTAGGCAAGGACAGATGCCCAGGGGTATGCGGTCTTTTCTCTaGAACCGCAACCCACACACA +
Preference number: 5 (lower is better)
Translates to: PGRHQPPKSPRQGQMPRGMRSFL*NRNPHT
Trigger: TGTGTGTGGGTTGCGGTTCAAGAGAAAAGACCGCAT...ACCCCTGGGCATCTGTCCTTGCCTAGGTGATTTTGGAGGTTGGTGCCTTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp GAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACCCCCCCTTGCTACCCCCATTaGGGGGCTCTGACATGGGAA +
Preference number: 5 (lower is better)
Translates to: ERNLDAIGGSRKVLLATPPCYPH*GALTWE
Trigger: TTCCCATGTCAGAGCCCCCAAATGGGGGTAGCAAGG...GGGGGTAGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp AGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACCCCCCAGAAAGGTGCTCCTaGCTACCCCCATTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: RKKLGCYRGFQKGAPCYPPERCS*LPPFGG
Trigger: GCCCCCAAATGGGGGTAGCAAGGAGCACCTTTCTGG...GGGGTAGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTCAGATACTGCAGAAGTaGCTGGGCCCCTCGCTGTGC +
Preference number: 5 (lower is better)
Translates to: STWACSHVTQLRYTMSLPQILQK*LGPSLC
Trigger: GCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTG...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 90 bp AGGAAACAGTGGGCAGATTACCTCGGTTACAGATACTGCAGAAGTTaGTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTGCCATGTATG +
Preference number: 5 (lower is better)
Translates to: RKQWADYLGYRYCRS*WAPRCASSGGLPCM
Trigger: CATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTAATCTGCCCACTGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS CCA 90 bp AGAAAGAGCCATTGGCACTCTGCTTCTCTGGCGTCTTCAGGTCGCTaGCATCTGAGAGGTCACCATAGGAGTCAGAGCTCTCAATCGGAT +
Preference number: 5 (lower is better)
Translates to: RKSHWHSASLASSGR*HLRGHHRSQSSQSD
Trigger: ATCCGATTGAGAGCTCTGACTCCTATGGTGACCTCTCAGATGCCAGCGACCTGAAGACGCCAGAGAAGCAGAGTGCCAATGGCTCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 90 bp AAACAGTGGGCAGATTACCTCGGTTACAGATACTGCAGAAGTTGCTaGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTGCCATGTATGCTG +
Preference number: 5 (lower is better)
Translates to: KQWADYLGYRYCRSC*APRCASSGGLPCML
Trigger: CAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTAATCTGCCCACTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS-3UTR CAA 90 bp AGTGATGCCAGGGGAAGGGAAGCAGATAAGCTGGTGGCTAGTTCCCAGGAAGGCACCAGGATCTGTACGTaGGACTGTTTGATGACTTCC +
Preference number: 5 (lower is better)
Translates to: SDARGREADKLVASSQEGTRICT*DCLMTS
Trigger: GGAAGTCATCAAACAGTCCAACGTACAGATCCTGGT...GCCTTCCTGGGAACTAGCCACCAGCTTATCTGCTTCCCTTCCCCTGGCATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp ACAGCATTTCCCAGCAGTCCCCAGATGGTTGTTTCCGTGGGGACACAGCAGCTGACCAGGATCTGTACGTaGGACTGTTTGATGACTTCC +
Preference number: 5 (lower is better)
Translates to: TAFPSSPQMVVSVGTQQLTRICT*DCLMTS
Trigger: GGAAGTCATCAAACAGTCCAACGTACAGATCCTGGT...CAGCTGCTGTGTCCCCACGGAAACAACCATCTGGGGACTGCTGGGAAATGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp ATCACAAGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGCAGATACTGCAGAAGTaGCTGGGCCCCTCGCTGTGC +
Preference number: 5 (lower is better)
Translates to: ITRSTWACSHVTQLRYTMQILQK*LGPSLC
Trigger: GCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTG...CATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGGAGCTCAGGGGGCTCTaGGAGGACACTCACCCCATG +
Preference number: 5 (lower is better)
Translates to: LLPIKETGTGFALEAYVVELRGL*EDTHPM
Trigger: CATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCTC...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS TCA 90 bp CCAGAAACTCAGTGTTTTCTAGGACCAGAGGCGGTGGCAGTAGAATaGAACAGAGCTGCCTCACTGCAGCCTTTCCAGGAGGGGATATGT +
Preference number: 5 (lower is better)
Translates to: PETQCFLGPEAVAVE*NRAASLQPFQEGIC
Trigger: ACATATCCCCTCCTGGAAAGGCTGCAGTGAGGCAGCTCTGTTTCATTCTACTGCCACCGCCTCTGGTCCTAGAAAACACTGAGTTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465287.1
CDS GCA 90 bp TATGGGCCCAAGCTTGGGAAGAACCTCTCTCCTTCTGTTTTGACCTaGTGGTCTCCTGGGACTTCCCATTCTAAGCACCCCAAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: YGPKLGKNLSPSVLT*WSPGTSHSKHPKLL
Trigger: AAGAAGCTTGGGGTGCTTAGAATGGGAAGTCCCAGGAGACCAGCAGGTCAAAACAGAAGGAGAGAGGTTCTTCCCAAGCTTGGGCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS-3UTR CAA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTCACAGGCAAAGAGGCTaGGCCTGCAATGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGHRQRG*ACNGCT
Trigger: GGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGTG...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTCAGATACTGCAGAAGTaGCTGGGCCCCTCGCTGTGC +
Preference number: 5 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGQILQK*LGPSLC
Trigger: GCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTG...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGGAATTCCAGCTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGGCAGTCCCCAGATGGTaGTTTCCGTGGGGACACAGC +
Preference number: 5 (lower is better)
Translates to: RNSSFFPLKKLGLVLPWRAVPRW*FPWGHS
Trigger: GCTGTGTCCCCACGGAAACAACCATCTGGGGACTGC...CCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAGCTGGAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp CTGCGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCAGAGCTCAGGGGGCTCTaGGAGGACACTCACCCCATG +
Preference number: 5 (lower is better)
Translates to: LRFTKSSVSPGIAFSSNSELRGL*EDTHPM
Trigger: CATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCTC...TGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp GAGCTTGTCCTAGCAGTGAAAATGCTCGCCTCCAAGCAGGGCTCAGAAAGGTCTAAGGTCAACCTGGGCTaGCTCACATGTGACACAACT +
Preference number: 5 (lower is better)
Translates to: ELVLAVKMLASKQGSERSKVNLG*LTCDTT
Trigger: AGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTT...AGACCTTTCTGAGCCCTGCTTGGAGGCGAGCATTTTCACTGCTAGGACAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp ACAGAACCCAAACATCACTTCCCTCCGCATTCACAGCATTTCCCAGCAGTCCCCAAGGTCAACCTGGGCTaGCTCACATGTGACACAACT +
Preference number: 5 (lower is better)
Translates to: TEPKHHFPPHSQHFPAVPKVNLG*LTCDTT
Trigger: AGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTT...GGGGACTGCTGGGAAATGCTGTGAATGCGGAGGGAAGTGATGTTTGGGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAGCCAAGGCTGCCCCGTaGGTCATGTCCAAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGIAKAAP*VMSKGK
Trigger: CTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGC...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTTGCTGCCGGAGCCGGTaGGCATCAGTGAACACCTTA +
Preference number: 5 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGCCRSR*ASVNTL
Trigger: TAAGGTGTTCACTGATGCCAACCGGCTCCGGCAGCA...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGCCCAGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACATCACGGAAGATCTaGCCGCAGATCTCACAAGCC +
Preference number: 5 (lower is better)
Translates to: SPERNLDAIGGSRKVLLATSRKI*PQISQA
Trigger: GGCTTGTGAGATCTGCGGCAAGATCTTCCGTGATGT...AGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCTGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp GTTGACTCTAGTTGGAATTGTGCCAGTCTTCTCTGGAGGCCGACTCACTCGTGGAAGCTACTCATTAGTTaGGTTCCTGAGCAGACCTGC +
Preference number: 5 (lower is better)
Translates to: VDSSWNCASLLWRPTHSWKLLIS*VPEQTC
Trigger: GCAGGTCTGCTCAGGAACCAAACTAATGAGTAGCTT...CCACGAGTGAGTCGGCCTCCAGAGAAGACTGGCACAATTCCAACTAGAGTCAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp GCTGCCTCATTTCCCTTCAGGCCCCATGGGCTGCTGGTCAACCTCAGGATCTACCAGAATATCATAGATTaGGGTATAGGATTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: AASFPFRPHGLLVNLRIYQNIID*GIGLGS
Trigger: TGACCCCAATCCTATACCCAAATCTATGATATTCTG...GTAGATCCTGAGGTTGACCAGCAGCCCATGGGGCCTGAAGGGAAATGAGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS-3UTR CAA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTTGGTTCCCAACAGCATaGAAACCCCCTACTTCCCTG +
Preference number: 5 (lower is better)
Translates to: STWACSHVTQLRYTMSLPWFPTA*KPPTSL
Trigger: CAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCA...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTAGCCAAGGCTGCCCCGTaGGTCATGTCCAAAGGGAAG +
Preference number: 5 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLAKAAP*VMSKGK
Trigger: CTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGC...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATATGCTGCCGGAGCCGGTaGGCATCAGTGAACACCTTA +
Preference number: 5 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGICCRSR*ASVNTL
Trigger: TAAGGTGTTCACTGATGCCAACCGGCTCCGGCAGCA...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAACTGGTCCTATGCTGCCGGAGCCGGTaGGCATCAGTGAACACCTTA +
Preference number: 5 (lower is better)
Translates to: SSVSPGIAFSSNSLQLVLCCRSR*ASVNTL
Trigger: TAAGGTGTTCACTGATGCCAACCGGCTCCGGCAGCA...TAGGACCAGTTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTAAAGGTCAACCTGGGCTaGCTCACATGTGACACAACT +
Preference number: 5 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLKVNLG*LTCDTT
Trigger: AGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTT...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp TTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGACGCTGCTGGTTCAGGTaGTGCAGCATCTCCGTGCTG +
Preference number: 5 (lower is better)
Translates to: FSAPVPYQVSLIFLQNIRRCWFR*CSISVL
Trigger: CAGCACGGAGATGCTGCACAACCTGAACCAGCAGCG...TCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTATGTACGTTGGACTGTTaGATGACTTCCTGGCAGATC +
Preference number: 5 (lower is better)
Translates to: RSTWACSHVTQLRYTMSLCTLDC*MTSWQI
Trigger: GATCTGCCAGGAAGTCATCAAACAGTCCAACGTACA...TAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp TCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGTCCCTACCTTGTACGTTGGACTGTTaGATGACTTCCTGGCAGATC +
Preference number: 5 (lower is better)
Translates to: STWACSHVTQLRYTMSLPCTLDC*MTSWQI
Trigger: GATCTGCCAGGAAGTCATCAAACAGTCCAACGTACA...AGGTAGGGACATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGACATCACGGAAGATCTaGCCGCAGATCTCACAAGCC +
Preference number: 5 (lower is better)
Translates to: LLPIKETGTGFALEAYVVTSRKI*PQISQA
Trigger: GGCTTGTGAGATCTGCGGCAAGATCTTCCGTGATGT...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGAAAGAAACTTGGATGCTATAGGGGGTTCCAGAAAGGTGCTCCTTGCTACCCCCCCCAAAGCCATATATaGGGGTGGCCCAATATAAAG +
Preference number: 5 (lower is better)
Translates to: RKKLGCYRGFQKGAPCYPPQSHI*GWPNIK
Trigger: CTTTATATTGGGCCACCCCAATATATGGCTTTGGGG...GGGGTAGCAAGGAGCACCTTTCTGGAACCCCCTATAGCATCCAAGTTTCTTTCT
49% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000215919.3
CDS-3UTR CAA 90 bp ATCACAAGGTCAACCTGGGCTTGCTCACATGTGACACAACTGAGGTACACAATGGGGACTGGTTTTGCCTaGGAGGCCTATGTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: ITRSTWACSHVTQLRYTMGTGFA*EAYVVF
Trigger: AAACACTACATAGGCCTCCAAGGCAAAACCAGTCCC...CATTGTGTACCTCAGTTGTGTCACATGTGAGCAAGCCCAGGTTGACCTTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAAGAGCTCAGGGGGCTCTaGGAGGACACTCACCCCATG +
Preference number: 5 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQELRGL*EDTHPM
Trigger: CATGGGGTGAGTGTCCTCCAAGAGCCCCCTGAGCTC...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp CTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGCCTATGTAGTGTGGTTCCCAACAGCATaGAAACCCCCTACTTCCCTG +
Preference number: 5 (lower is better)
Translates to: LLPIKETGTGFALEAYVVWFPTA*KPPTSL
Trigger: CAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCA...CACTACATAGGCCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp TTGGAGGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATGGTTCCCAACAGCATaGAAACCCCCTACTTCCCTG +
Preference number: 5 (lower is better)
Translates to: LEAYVVFSAPVPYQVSLIWFPTA*KPPTSL
Trigger: CAGGGAAGTAGGGGGTTTCAATGCTGTTGGGAACCA...TATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCCTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp TCTAAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTGCGATGCCATTGCTGTaGGCTGCCAAGGCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: SKQSLILTLMCDCGLQRAAMPLL*AAKAAP
Trigger: CGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGC...AGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp CCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGAAAATCCACAGGCAAAGAGGCTaGGCCTGCAATGGCTGCACC +
Preference number: 5 (lower is better)
Translates to: PCPIPSLIDISAEYQMKIHRQRG*ACNGCT
Trigger: GGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGTG...GATTTTCATCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATGTCCCCAAATACCTaGGAGCTGATAGTGTGCATC +
Preference number: 5 (lower is better)
Translates to: RSGRGPKSLRSQNIIDLGMSPNT*ELIVCI
Trigger: GATGCACACTATCAGCTCCAAGGTATTTGGGGACAT...ACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp GAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATGTACGTTGGACTGTTaGATGACTTCCTGGCAGATC +
Preference number: 5 (lower is better)
Translates to: ELEKWEGTKITEVPEYHRCTLDC*MTSWQI
Trigger: GATCTGCCAGGAAGTCATCAAACAGTCCAACGTACA...TCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp TTGGAGGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATAACCAGGATCTGTACGTaGGACTGTTTGATGACTTCC +
Preference number: 5 (lower is better)
Translates to: LEAYVVFSAPVPYQVSLITRICT*DCLMTS
Trigger: GGAAGTCATCAAACAGTCCAACGTACAGATCCTGGT...TATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp GGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTATGCGGTCTTTTCTCTaGAACCGCAACCCACACACA +
Preference number: 5 (lower is better)
Translates to: GLCSVFCPCPIPSLIDISMRSFL*NRNPHT
Trigger: TGTGTGTGGGTTGCGGTTCAAGAGAAAAGACCGCAT...AGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAATGCGGTCTTTTCTCTaGAACCGCAACCCACACACA +
Preference number: 5 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGIMRSFL*NRNPHT
Trigger: TGTGTGTGGGTTGCGGTTCAAGAGAAAAGACCGCAT...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGTCTGATCAGATCAATTCACATCACAAGGTCAACCTGGGCTTGCTCACATGTGCCATCAGACTCCATTTaGTTTTTGGGGACTGCCATG +
Preference number: 5 (lower is better)
Translates to: SLIRSIHITRSTWACSHVPSDSI*FLGTAM
Trigger: CATGGCAGTCCCCAAAAACAAAATGGAGTCTGATGG...CACATGTGAGCAAGCCCAGGTTGACCTTGTGATGTGAATTGATCTGATCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp GAACTAGAGAAGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGACCATCAGACTCCATTTaGTTTTTGGGGACTGCCATG +
Preference number: 5 (lower is better)
Translates to: ELEKWEGTKITEVPEYHRPSDSI*FLGTAM
Trigger: CATGGCAGTCCCCAAAAACAAAATGGAGTCTGATGG...TCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACTTCTCTAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGTGGGAGGGGACCAAAATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAATGTCCCCAAATACCTaGGAGCTGATAGTGTGCATC +
Preference number: 5 (lower is better)
Translates to: SGRGPKSLRSQNIIDLGIMSPNT*ELIVCI
Trigger: GATGCACACTATCAGCTCCAAGGTATTTGGGGACAT...TATACCCAAATCTATGATATTCTGGGACCTCAGTGATTTTGGTCCCCTCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp ACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGAATACATCACGGAAGATCTaGCCGCAGATCTCACAAGCC +
Preference number: 5 (lower is better)
Translates to: TEVPEYHRFGYRIGVTKNTSRKI*PQISQA
Trigger: GGCTTGTGAGATCTGCGGCAAGATCTTCCGTGATGT...ATTCTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp CCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGAAAATCCAGGAGAAAGAGCCATaGGCACTCTGCTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: PCPIPSLIDISAEYQMKIQEKEP*ALCFSG
Trigger: GCCAGAGAAGCAGAGTGCCAATGGCTCTTTCTCCTG...GATTTTCATCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp ATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGATGTCCCCAAATACCTaGGAGCTGATAGTGTGCATC +
Preference number: 5 (lower is better)
Translates to: ITEVPEYHRFGYRIGVTKMSPNT*ELIVCI
Trigger: GATGCACACTATCAGCTCCAAGGTATTTGGGGACAT...CTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AGGAATTCCAGCTTCTTCCCATTAAAGAAACTGGGACTGGTTTTGCCTTGGAGGGATTTGGGTATAGGATaGGGGTCACTAAGAATTGAG +
Preference number: 5 (lower is better)
Translates to: RNSSFFPLKKLGLVLPWRDLGIG*GSLRIE
Trigger: CTCAATTCTTAGTGACCCCAATCCTATACCCAAATC...CCTCCAAGGCAAAACCAGTCCCAGTTTCTTTAATGGGAAGAAGCTGGAATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp TTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGAACCAGGATCTGTACGTaGGACTGTTTGATGACTTCC +
Preference number: 5 (lower is better)
Translates to: FSAPVPYQVSLIFLQNIRTRICT*DCLMTS
Trigger: GGAAGTCATCAAACAGTCCAACGTACAGATCCTGGT...TCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp AAACAAAGTTTAATACTAACCCTAATGTGTGACTGCGGTTTACAAAGAGCTCTGACATCACGGAAGATCTaGCCGCAGATCTCACAAGCC +
Preference number: 5 (lower is better)
Translates to: KQSLILTLMCDCGLQRALTSRKI*PQISQA
Trigger: GGCTTGTGAGATCTGCGGCAAGATCTTCCGTGATGT...CAGAGCTCTTTGTAAACCGCAGTCACACATTAGGGTTAGTATTAAACTTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp TTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGACCATCAGACTCCATTTaGTTTTTGGGGACTGCCATG +
Preference number: 5 (lower is better)
Translates to: FSAPVPYQVSLIFLQNIRPSDSI*FLGTAM
Trigger: CATGGCAGTCCCCAAAAACAAAATGGAGTCTGATGG...TCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp CCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGAAAATCGGGACTGGTTTTGCCTaGGAGGCCTATGTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: PCPIPSLIDISAEYQMKIGTGFA*EAYVVF
Trigger: AAACACTACATAGGCCTCCAAGGCAAAACCAGTCCC...GATTTTCATCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp TTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTACAAGGGACTGGTTTTGCCTaGGAGGCCTATGTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: FTKSSVSPGIAFSSNSLQGTGFA*EAYVVF
Trigger: AAACACTACATAGGCCTCCAAGGCAAAACCAGTCCC...TTGTAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp CGGTTTACAAAGAGCTCTGTATCACCTGGGATAGCTTTCAGTAGCAATTCACTAGATTTGGGTATAGGATaGGGGTCACTAAGAATTGAG +
Preference number: 5 (lower is better)
Translates to: RFTKSSVSPGIAFSSNSLDLGIG*GSLRIE
Trigger: CTCAATTCTTAGTGACCCCAATCCTATACCCAAATC...TAGTGAATTGCTACTGAAAGCTATCCCAGGTGATACAGAGCTCTTTGTAAACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp ATCACTGAGGTCCCAGAATATCATAGATTTGGGTATAGGATTGGGGTCACTAAGGATTTGGGTATAGGATaGGGGTCACTAAGAATTGAG +
Preference number: 5 (lower is better)
Translates to: ITEVPEYHRFGYRIGVTKDLGIG*GSLRIE
Trigger: CTCAATTCTTAGTGACCCCAATCCTATACCCAAATC...CTTAGTGACCCCAATCCTATACCCAAATCTATGATATTCTGGGACCTCAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp GGCCTATGTAGTGTTTTCTGCCCCTGTCCCATACCAAGTCTCATTGATATTTCTCAGAATATCATAGATTaGGGTATAGGATTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GLCSVFCPCPIPSLIDISQNIID*GIGLGS
Trigger: TGACCCCAATCCTATACCCAAATCTATGATATTCTG...AGAAATATCAATGAGACTTGGTATGGGACAGGGGCAGAAAACACTACATAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS-3UTR CAA 90 bp CCCTGTCCCATACCAAGTCTCATTGATATTTCTGCAGAATATCAGATGAAAATCCAGAATATCATAGATTaGGGTATAGGATTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: PCPIPSLIDISAEYQMKIQNIID*GIGLGS
Trigger: TGACCCCAATCCTATACCCAAATCTATGATATTCTG...GATTTTCATCTGATATTCTGCAGAAATATCAATGAGACTTGGTATGGGACAGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp GGCTTGGCCTGCAATGGCTGCACCAGCCGCCCGAGCTaGCTCCTCCTCTGGCTGCATGCTGCCGGCGATGCC +
Preference number: 6 (lower is better)
Translates to: GLACNGCTSRPS*LLLWLHAAGDA
Trigger: GGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS TCA 72 bp CCCCGTCCGCAGCTCCGCCGTCGCCCAACTGGGCGCTaGACACCGACTCAAAGTACTCGCTGCAGGCGGCCA +
Preference number: 6 (lower is better)
Translates to: PRPQLRRRPTGR*TPTQSTRCRRP
Trigger: TGGCCGCCTGCAGCGAGTACTTTGAGTCGGTGTTCAGCGCCCAGTTGGGCGACGGCGGAGCTGCGGACGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp GCTGCACCAGCCGCCCGAGCTGCCTCCTCCTCTGGCTaGATGCTGCCGGCGATGCCATTGCTGTTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: AAPAARAASSSG*MLPAMPLLLAA
Trigger: GGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS TCA 72 bp GAGGAGGAAGGTCGATGTAGCCCAGCTGGAGGCTGGTaGCACCGTGCTGGGCCTCGTGCTGCCGGAGCCGGT +
Preference number: 6 (lower is better)
Translates to: EEEGRCSPAGGW*HRAGPRAAGAG
Trigger: ACCGGCTCCGGCAGCACGAGGCCCAGCACGGTGTCACCAGCCTCCAGCTGGGCTACATCGACCTTCCTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp CAGCCGCCCGAGCTGCCTCCTCCTCTGGCTGCATGCTaGCGGCGATGCCATTGCTGTTGGCTGCCAAGGCTG +
Preference number: 6 (lower is better)
Translates to: QPPELPPPLAAC*RRCHCCWLPRL
Trigger: CAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp CACCAGCCGCCCGAGCTGCCTCCTCCTCTGGCTGCATaGTGCCGGCGATGCCATTGCTGTTGGCTGCCAAGG +
Preference number: 6 (lower is better)
Translates to: HQPPELPPPLAA*CRRCHCCWLPR
Trigger: CCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp GAGCTGCCTCCTCCTCTGGCTGCATGCTGCCGGCGATaGCATTGCTGTTGGCTGCCAAGGCTGCCCCGTTGG +
Preference number: 6 (lower is better)
Translates to: ELPPPLAACCRR*HCCWLPRLPRW
Trigger: CCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp CTCCCCCAGCCTCTCCCGCCACGGGCAGCCAATGAATaGCACCCGGATGGAATTCAGTCCCCAGAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LPQPLPPRAANE*HPDGIQSPEAS
Trigger: GCTGGCCTCTGGGGACTGAATTCCATCCGGGTGGCATTCATTGGCTGCCCGTGGCGGGAGAGGCTGGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465287.1
CDS CCA 72 bp AATGGCTGCACCAGCCGCCCGAGCTGCCTCCTCCTCTaGCTGCATGCTGCCGGCGATGCCATTGCTGTTGGC +
Preference number: 6 (lower is better)
Translates to: NGCTSRPSCLLL*LHAAGDAIAVG
Trigger: GCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 72 bp GGTGGTCCAGCCCTGCCTCAGATATCCCGGCGGGGCTaGGCAGAAGAGAGTGTTGCTGGAGTGTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: GGPALPQISRRG*AEESVAGVCWA
Trigger: GGCCCAGCACACTCCAGCAACACTCTCTTCTGCCCAGCCCCGCCGGGATATCTGAGGCAGGGCTGGACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000215919.3
ENST00000465287.1
CDS CAA 90 bp GCCCGAGCTGCCTCCTCCTCTGGCTGCATGCTGCCGGCGATGCCATaGCTGTTGGCTGCCAAGGCTGCCCCGTTGGTCATGTCCAAAGGG +
Preference number: 6 (lower is better)
Translates to: ARAASSSGCMLPAMP*LLAAKAAPLVMSKG
Trigger: CCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGCTCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 72 bp CCCCAGGTAACACAGGCAAAGAGGCTTGGCCTGCAATaGCTGCACCAGCCGCCCGAGCTGCCTCCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: PQVTQAKRLGLQ*LHQPPELPPPL
Trigger: CAGAGGAGGAGGCAGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGTGTTACCTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 72 bp AAGCGGTCCACCCCAGGTAACACAGGCAAAGAGGCTTaGCCTGCAATGGCTGCACCAGCCGCCCGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: KRSTPGNTGKEA*PAMAAPAARAA
Trigger: GGCAGCTCGGGCGGCTGGTGCAGCCATTGCAGGCCAAGCCTCTTTGCCTGTGTTACCTGGGGTGGACCGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 72 bp GTGGGCAGGGGCTGCCTGACCGGTAAGACTGGTTCCTaGTCGGGGCCCTCTGAGGGAGTTCTCCATCCCTGT +
Preference number: 6 (lower is better)
Translates to: VGRGCLTGKTGS*SGPSEGVLHPC
Trigger: ACAGGGATGGAGAACTCCCTCAGAGGGCCCCGACCAGGAACCAGTCTTACCGGTCAGGCAGCCCCTGCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465287.1
CDS CAA 72 bp GCCTCCTCCTCTGGCTGCATGCTGCCGGCGATGCCATaGCTGTTGGCTGCCAAGGCTGCCCCGTTGGTCATG +
Preference number: 6 (lower is better)
Translates to: ASSSGCMLPAMP*LLAAKAAPLVM
Trigger: CATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CAA 90 bp GCTGCCTCCTCCTCTGGCTGCATGCTGCCGGCGATGCCATTGCTGTaGGCTGCCAAGGCTGCCCCGTTGGTCATGTCCAAAGGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: AASSSGCMLPAMPLL*AAKAAPLVMSKGKP
Trigger: GGGCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp CCCGCAAGAGCACGTCGCAGAAGCGCCCGCCGTTTTTaGGCTGCTGGTTCAGGTTGTGCAGCATCTCCGTGC +
Preference number: 6 (lower is better)
Translates to: PARARRRSARRF*AAGSGCAASPC
Trigger: GCACGGAGATGCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCTTCTGCGACGTGCTCTTGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp CCTCCTCCTCTGGCTGCATGCTGCCGGCGATGCCATTaGTGTTGGCTGCCAAGGCTGCCCCGTTGGTCATGT +
Preference number: 6 (lower is better)
Translates to: PPPLAACCRRCH*CWLPRLPRWSC
Trigger: ACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp AGCTGGAGGCTGGTGACACCGTGCTGGGCCTCGTGCTaGCGGAGCCGGTTGGCATCAGTGAACACCTTACCA +
Preference number: 6 (lower is better)
Translates to: SWRLVTPCWASC*RSRLASVNTLP
Trigger: TGGTAAGGTGTTCACTGATGCCAACCGGCTCCGGCAGCACGAGGCCCAGCACGGTGTCACCAGCCTCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 72 bp GGCTCCTCTTTCGGGGGCCGTCGGGGTCTTCAGAGATaGGTAGCCCATTCTCACCCAGCCTCGGAGGAGGAA +
Preference number: 6 (lower is better)
Translates to: GSSFGGRRGLQR*VAHSHPASEEE
Trigger: TTCCTCCTCCGAGGCTGGGTGAGAATGGGCTACCCATCTCTGAAGACCCCGACGGCCCCCGAAAGAGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp GCTGCCGGCGATGCCATTGCTGTTGGCTGCCAAGGCTaGCCCGTTGGTCATGTCCAAAGGGAAGCCCAAGTC +
Preference number: 6 (lower is better)
Translates to: AAGDAIAVGCQG*PVGHVQREAQV
Trigger: GACTTGGGCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp TCACGGAAGATCTTGCCGCAGATCTCACAAGCCACCTaGTTCCTGGTCCGGCTCCTCTTTCGGGGGCCGTCG +
Preference number: 6 (lower is better)
Translates to: SRKILPQISQAT*FLVRLLFRGPS
Trigger: CGACGGCCCCCGAAAGAGGAGCCGGACCAGGAAGCAGGTGGCTTGTGAGATCTGCGGCAAGATCTTCCGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 72 bp AGATCTTGCCGCAGATCTCACAAGCCACCTGCTTCCTaGTCCGGCTCCTCTTTCGGGGGCCGTCGGGGTCTT +
Preference number: 6 (lower is better)
Translates to: RSCRRSHKPPAS*SGSSFGGRRGL
Trigger: AAGACCCCGACGGCCCCCGAAAGAGGAGCCGGACCAGGAAGCAGGTGGCTTGTGAGATCTGCGGCAAGATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CAA 90 bp TGGAGGCTGGTGACACCGTGCTGGGCCTCGTGCTGCCGGAGCCGGTaGGCATCAGTGAACACCTTACCACATAGACCGCATGGAAGGATG +
Preference number: 6 (lower is better)
Translates to: WRLVTPCWASCCRSR*ASVNTLPHRPHGRM
Trigger: CATCCTTCCATGCGGTCTATGTGGTAAGGTGTTCACTGATGCCAACCGGCTCCGGCAGCACGAGGCCCAGCACGGTGTCACCAGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CAA 90 bp CAGCCCTGCCTCAGATATCCCGGCGGGGCTGGGCAGAAGAGAGTGTaGCTGGAGTGTGCTGGGCCCAGGTTTTCAAGGGCTGGGAATGAT +
Preference number: 6 (lower is better)
Translates to: QPCLRYPGGAGQKRV*LECAGPRFSRAGND
Trigger: ATCATTCCCAGCCCTTGAAAACCTGGGCCCAGCACACTCCAGCAACACTCTCTTCTGCCCAGCCCCGCCGGGATATCTGAGGCAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215919.3
ENST00000465287.1
CDS TCA 72 bp GCTGGGCCTCGTGCTGCCGGAGCCGGTTGGCATCAGTaGACACCTTACCACATAGACCGCATGGAAGGATGC +
Preference number: 6 (lower is better)
Translates to: AGPRAAGAGWHQ*TPYHIDRMEGC
Trigger: GCATCCTTCCATGCGGTCTATGTGGTAAGGTGTTCACTGATGCCAACCGGCTCCGGCAGCACGAGGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp GCTGGTTCAGGTTGTGCAGCATCTCCGTGCTGTGTCTaGTCACCTGGTATGTGTAGCAGCCAGACGGGCCGC +
Preference number: 6 (lower is better)
Translates to: AGSGCAASPCCV*SPGMCSSQTGR
Trigger: GCGGCCCGTCTGGCTGCTACACATACCAGGTGAGCAGACACAGCACGGAGATGCTGCACAACCTGAACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp TGGCTGCATGCTGCCGGCGATGCCATTGCTGTTGGCTaGCAAGGCTGCCCCGTTGGTCATGTCCAAAGGGAA +
Preference number: 6 (lower is better)
Translates to: WLHAAGDAIAVG*QGCPVGHVQRE
Trigger: TTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CCA 72 bp CGATGCCATTGCTGTTGGCTGCCAAGGCTGCCCCGTTaGTCATGTCCAAAGGGAAGCCCAAGTCCGAGGTCC +
Preference number: 6 (lower is better)
Translates to: RCHCCWLPRLPR*SCPKGSPSPRS
Trigger: GGACCTCGGACTTGGGCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CAA 72 bp CAGAAGCGCCCGCCGTTTTTGCGCTGCTGGTTCAGGTaGTGCAGCATCTCCGTGCTGTGTCTGCTCACCTGG +
Preference number: 6 (lower is better)
Translates to: QKRPPFLRCWFR*CSISVLCLLTW
Trigger: CCAGGTGAGCAGACACAGCACGGAGATGCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CAA 72 bp GCGATGCCATTGCTGTTGGCTGCCAAGGCTGCCCCGTaGGTCATGTCCAAAGGGAAGCCCAAGTCCGAGGTC +
Preference number: 6 (lower is better)
Translates to: AMPLLLAAKAAP*VMSKGKPKSEV
Trigger: GACCTCGGACTTGGGCTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CAA 72 bp TCCTCTGGCTGCATGCTGCCGGCGATGCCATTGCTGTaGGCTGCCAAGGCTGCCCCGTTGGTCATGTCCAAA +
Preference number: 6 (lower is better)
Translates to: SSGCMLPAMPLL*AAKAAPLVMSK
Trigger: TTTGGACATGACCAACGGGGCAGCCTTGGCAGCCAACAGCAATGGCATCGCCGGCAGCATGCAGCCAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CAA 72 bp GTGACACCGTGCTGGGCCTCGTGCTGCCGGAGCCGGTaGGCATCAGTGAACACCTTACCACATAGACCGCAT +
Preference number: 6 (lower is better)
Translates to: VTPCWASCCRSR*ASVNTLPHRPH
Trigger: ATGCGGTCTATGTGGTAAGGTGTTCACTGATGCCAACCGGCTCCGGCAGCACGAGGCCCAGCACGGTGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CAA 72 bp CTCAGATATCCCGGCGGGGCTGGGCAGAAGAGAGTGTaGCTGGAGTGTGCTGGGCCCAGGTTTTCAAGGGCT +
Preference number: 6 (lower is better)
Translates to: LRYPGGAGQKRV*LECAGPRFSRA
Trigger: AGCCCTTGAAAACCTGGGCCCAGCACACTCCAGCAACACTCTCTTCTGCCCAGCCCCGCCGGGATATCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000215919.3
ENST00000465287.1
CDS TCA 72 bp TGGCTGTGCAAAGAGTGGAGTCTGAGGCAGGGTGATTaGGACACCCCTAGGCCTCCCATACACGCTCAGGCC +
Preference number: 6 (lower is better)
Translates to: WLCKEWSLRQGD*DTPRPPIHAQA
Trigger: GGCCTGAGCGTGTATGGGAGGCCTAGGGGTGTCTCAATCACCCTGCCTCAGACTCCACTCTTTGCACAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS TCA 72 bp TGGGAAGTAGGGGGTGGCTGTGCAAAGAGTGGAGTCTaGGGCAGGGTGATTGAGACACCCCTAGGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: WEVGGGCAKSGV*GRVIETPLGLP
Trigger: TGGGAGGCCTAGGGGTGTCTCAATCACCCTGCCTCAGACTCCACTCTTTGCACAGCCACCCCCTACTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS GCA 72 bp AAGAGCACGTCGCAGAAGCGCCCGCCGTTTTTGCGCTaGTGGTTCAGGTTGTGCAGCATCTCCGTGCTGTGT +
Preference number: 6 (lower is better)
Translates to: KSTSQKRPPFLR*WFRLCSISVLC
Trigger: ACACAGCACGGAGATGCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCTTCTGCGACGTGCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp CTCGCTGTGCTTCTTCAGGTGGTCTGCCATGTATGCTaGCCGCAAGTACTTCCCACACACCTGGCAGGGCAC +
Preference number: 6 (lower is better)
Translates to: LAVLLQVVCHVC*PQVLPTHLAGH
Trigger: GTGCCCTGCCAGGTGTGTGGGAAGTACTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
ENST00000494109.1
CDS GCA 72 bp GTTGCTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTaGCATGTATGCTGCCCGCAAGTACTTCCCACACAC +
Preference number: 6 (lower is better)
Translates to: VAGPLAVLLQVV*HVCCPQVLPTH
Trigger: GTGTGTGGGAAGTACTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
ENST00000494109.1
CDS GCA 72 bp TTCTTTGTTGCCATAGGTCCTGGCGCAGTGGAACGCTaGTCCCCCATTCAGGATGGGCTCCTGGTGCCTGGA +
Preference number: 6 (lower is better)
Translates to: FFVAIGPGAVER*SPIQDGLLVPG
Trigger: TCCAGGCACCAGGAGCCCATCCTGAATGGGGGAGCAGCGTTCCACTGCGCCAGGACCTATGGCAACAAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266269.10
ENST00000405309.7
CDS TCA 72 bp GGGACCGCACATGGTAGGACATGCGGTCTTTTCTCTTaGACCGCAACCCACACACAGGGCAGGAGTAGGGCT +
Preference number: 6 (lower is better)
Translates to: GTAHGRTCGLFS*TATHTQGRSRA
Trigger: AGCCCTACTCCTGCCCTGTGTGTGGGTTGCGGTTCAAGAGAAAAGACCGCATGTCCTACCATGTGCGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp AAGCGCCCGCCGTTTTTGCGCTGCTGGTTCAGGTTGTaGAGCATCTCCGTGCTGTGTCTGCTCACCTGGTAT +
Preference number: 6 (lower is better)
Translates to: KRPPFLRCWFRL*SISVLCLLTWY
Trigger: ATACCAGGTGAGCAGACACAGCACGGAGATGCTGCACAACCTGAACCAGCAGCGCAAAAACGGCGGGCGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp AGAAGCCTTTCCCACAGCTCTGGCAGATGTAAGGCTTaGCCACGGACCCATCATGGGACCGCACATGGTAGG +
Preference number: 6 (lower is better)
Translates to: RSLSHSSGRCKA*PRTHHGTAHGR
Trigger: CCTACCATGTGCGGTCCCATGATGGGTCCGTGGGCAAGCCTTACATCTGCCAGAGCTGTGGGAAAGGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp GTGCCTGGAGACCTCGGTTACAGATACTGCAGAAGTTaGTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: VPGDLGYRYCRS*WAPRCASSGGL
Trigger: CAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTCTCCAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS CCA 72 bp CATGACAGGCCAGGTGGGAGCGCAGACGGTCTCGGGTaGCAAAAGAAGCATTGCAGGTCTGACACTTGTGAG +
Preference number: 6 (lower is better)
Translates to: HDRPGGSADGLG*QKKHCRSDTCE
Trigger: CTCACAAGTGTCAGACCTGCAATGCTTCTTTTGCCACCCGAGACCGTCTGCGCTCCCACCTGGCCTGTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
ENST00000494109.1
CDS CCA 72 bp CAGAAGTTGCTGGGCCCCTCGCTGTGCTTCTTCAGGTaGTCTGCCATGTATGCTGCCCGCAAGTACTTCCCA +
Preference number: 6 (lower is better)
Translates to: QKLLGPSLCFFR*SAMYAARKYFP
Trigger: TGGGAAGTACTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
ENST00000494109.1
CDS CCA 72 bp CAGTGGAACGCTGCTCCCCCATTCAGGATGGGCTCCTaGTGCCTGGAGACCTCGGTTACAGATACTGCAGAA +
Preference number: 6 (lower is better)
Translates to: QWNAAPPFRMGS*CLETSVTDTAE
Trigger: TTCTGCAGTATCTGTAACCGAGGTCTCCAGGCACCAGGAGCCCATCCTGAATGGGGGAGCAGCGTTCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS CAA 72 bp GGTGCCTGGAGACCTCGGTTACAGATACTGCAGAAGTaGCTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: GAWRPRLQILQK*LGPSLCFFRWS
Trigger: AGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTCTCCAGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405309.7
CDS CAA 90 bp ATGACTTCCTGGCAGATCTCGATAACCGACCTCATCAGCAGGAACTaGGCGGCCGTCATGAGTTCGGGAAAGCTCTCCAAGCGCACCACG +
Preference number: 6 (lower is better)
Translates to: MTSWQISITDLISRN*AAVMSSGKLSKRTT
Trigger: CGTGGTGCGCTTGGAGAGCTTTCCCGAACTCATGACGGCCGCCAAGTTCCTGCTGATGAGGTCGGTTATCGAGATCTGCCAGGAAGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS GCA 72 bp TTACAGATACTGCAGAAGTTGCTGGGCCCCTCGCTGTaGTTCTTCAGGTGGTCTGCCATGTATGCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: LQILQKLLGPSL*FFRWSAMYAAR
Trigger: GCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
ENST00000494109.1
CDS CCA 72 bp GTGAGCATTTCTGGCCTTCTTTGTTGCCATAGGTCCTaGCGCAGTGGAACGCTGCTCCCCCATTCAGGATGG +
Preference number: 6 (lower is better)
Translates to: VSISGLLCCHRS*RSGTLLPHSGW
Trigger: CCATCCTGAATGGGGGAGCAGCGTTCCACTGCGCCAGGACCTATGGCAACAAAGAAGGCCAGAAATGCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000266269.10
ENST00000405309.7
CDS TCA 72 bp ACTCTGCTTCTCTGGCGTCTTCAGGTCGCTGGCATCTaGGAGGTCACCATAGGAGTCAGAGCTCTCAATCGG +
Preference number: 6 (lower is better)
Translates to: TLLLWRLQVAGI*EVTIGVRALNR
Trigger: CCGATTGAGAGCTCTGACTCCTATGGTGACCTCTCAGATGCCAGCGACCTGAAGACGCCAGAGAAGCAGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS TCA 72 bp GGCCTCCCATACACGCTCAGGCCCATCCTCTGGAAGTaGGGAAACAGTGGGCAGATTACCTCGGTTACAGAT +
Preference number: 6 (lower is better)
Translates to: GLPYTLRPILWK*GNSGQITSVTD
Trigger: ATCTGTAACCGAGGTAATCTGCCCACTGTTTCCTCACTTCCAGAGGATGGGCCTGAGCGTGTATGGGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS GCA 72 bp CAGAGGAGAAACCTCGGTTACAGATACTGCAGAAGTTaGTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: QRRNLGYRYCRS*WAPRCASSGGL
Trigger: CAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTTTCTCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266269.10
CDS GCA 72 bp TGGGCAGATTACCTCGGTTACAGATACTGCAGAAGTTaGTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: WADYLGYRYCRS*WAPRCASSGGL
Trigger: CAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTAATCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS CAA 72 bp TGGCAGATCTCGATAACCGACCTCATCAGCAGGAACTaGGCGGCCGTCATGAGTTCGGGAAAGCTCTCCAAG +
Preference number: 6 (lower is better)
Translates to: WQISITDLISRN*AAVMSSGKLSK
Trigger: CTTGGAGAGCTTTCCCGAACTCATGACGGCCGCCAAGTTCCTGCTGATGAGGTCGGTTATCGAGATCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CAA 72 bp GCAGAGGAGAAACCTCGGTTACAGATACTGCAGAAGTaGCTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: AEEKPRLQILQK*LGPSLCFFRWS
Trigger: AGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTTTCTCCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266269.10
CDS CAA 72 bp GTGGGCAGATTACCTCGGTTACAGATACTGCAGAAGTaGCTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: VGRLPRLQILQK*LGPSLCFFRWS
Trigger: AGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTAATCTGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS TCA 72 bp GACACTTGTGAGGCCGCTCAGAAGTGTGCACCTGCTTaGTATGTCCGTTCAAGTGATCAGGCCTGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: DTCEAAQKCAPA*YVRSSDQAWRS
Trigger: GCTTCTCCAGGCCTGATCACTTGAACGGACATATCAAGCAGGTGCACACTTCTGAGCGGCCTCACAAGTGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS TCA 72 bp CAGTGTTTTCTAGGACCAGAGGCGGTGGCAGTAGAATaGAACAGAGCTGCCTCACTGCAGCCTTTCCAGGAG +
Preference number: 6 (lower is better)
Translates to: QCFLGPEAVAVE*NRAASLQPFQE
Trigger: CTCCTGGAAAGGCTGCAGTGAGGCAGCTCTGTTTCATTCTACTGCCACCGCCTCTGGTCCTAGAAAACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465287.1
CDS GCA 72 bp AGTAGGAGGCAGAGGAGAAACCTCGGTTACAGATACTaGAGAAGTTGCTGGGCCCCTCGCTGTGCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: SRRQRRNLGYRY*RSCWAPRCASS
Trigger: TGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTTTCTCCTCTGCCTCCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000266269.10
CDS GCA 72 bp ATTTCTGGCCTTCTCGGTTACAGATACTGCAGAAGTTaGTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: ISGLLGYRYCRS*WAPRCASSGGL
Trigger: CAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGAAGGCCAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351933.8
CDS CAA 72 bp ATATCGGCGCGGGCAGGGGGTACCAGGATCTGTACGTaGGACTGTTTGATGACTTCCTGGCAGATCTCGATA +
Preference number: 6 (lower is better)
Translates to: ISARAGGTRICT*DCLMTSWQISI
Trigger: TATCGAGATCTGCCAGGAAGTCATCAAACAGTCCAACGTACAGATCCTGGTACCCCCTGCCCGCGCCGATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CAA 72 bp CATTTCTGGCCTTCTCGGTTACAGATACTGCAGAAGTaGCTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: HFWPSRLQILQK*LGPSLCFFRWS
Trigger: AGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGAAGGCCAGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351933.8
CDS CAA 90 bp AAGAGCATTATATCGGCGCGGGCAGGGGGTACCAGGATCTGTACGTaGGACTGTTTGATGACTTCCTGGCAGATCTCGATAACCGACCTC +
Preference number: 6 (lower is better)
Translates to: KSIISARAGGTRICT*DCLMTSWQISITDL
Trigger: GAGGTCGGTTATCGAGATCTGCCAGGAAGTCATCAAACAGTCCAACGTACAGATCCTGGTACCCCCTGCCCGCGCCGATATAATGCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CAA 90 bp GAGGAAACAGTGGGCAGATTACCTCGGTTACAGATACTGCAGAAGTaGCTGGGCCCCTCGCTGTGCTTCTTCAGGTGGTCTGCCATGTAT +
Preference number: 6 (lower is better)
Translates to: EETVGRLPRLQILQK*LGPSLCFFRWSAMY
Trigger: ATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTAATCTGCCCACTGTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS CAA 90 bp GAGAGTTATGGGCCCAAGCTTGGGAAGAACCTCTCTCCTTCTGTTTaGACCTGCTGGTCTCCTGGGACTTCCCATTCTAAGCACCCCAAG +
Preference number: 6 (lower is better)
Translates to: ESYGPKLGKNLSPSV*TCWSPGTSHSKHPK
Trigger: CTTGGGGTGCTTAGAATGGGAAGTCCCAGGAGACCAGCAGGTCAAAACAGAAGGAGAGAGGTTCTTCCCAAGCTTGGGCCCATAACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS GCA 72 bp AGGAAACAGTGGGCAGATTACCTCGGTTACAGATACTaGAGAAGTTGCTGGGCCCCTCGCTGTGCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: RKQWADYLGYRY*RSCWAPRCASS
Trigger: TGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATCTGTAACCGAGGTAATCTGCCCACTGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS GCA 72 bp AAGCTTGGGAAGAACCTCTCTCCTTCTGTTTTGACCTaGTGGTCTCCTGGGACTTCCCATTCTAAGCACCCC +
Preference number: 6 (lower is better)
Translates to: KLGKNLSPSVLT*WSPGTSHSKHP
Trigger: GGGGTGCTTAGAATGGGAAGTCCCAGGAGACCAGCAGGTCAAAACAGAAGGAGAGAGGTTCTTCCCAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS TCA 72 bp GACACTTGTGAGGCCGCTCAGAAGTGTGCACCTGCTTaGTATGTCCGTTCAAGTGATCAGGCCTGGAAAAGA +
Preference number: 6 (lower is better)
Translates to: DTCEAAQKCAPA*YVRSSDQAWKR
Trigger: TCTTTTCCAGGCCTGATCACTTGAACGGACATATCAAGCAGGTGCACACTTCTGAGCGGCCTCACAAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465287.1
ENST00000494109.1
CDS CCA 72 bp GATGAAGGTGTTTATCATTCAGTGGGAAGTAGGGGGTaGCTGTGCAAAGAGTGGAGTCTGAGGCAGGGTGAT +
Preference number: 6 (lower is better)
Translates to: DEGVYHSVGSRG*LCKEWSLRQGD
Trigger: ATCACCCTGCCTCAGACTCCACTCTTTGCACAGCCACCCCCTACTTCCCACTGAATGATAAACACCTTCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS CCA 72 bp ACCAGGATCTGTACGTTGGACTGTTTGATGACTTCCTaGCAGATCTCGATAACCGACCTCATCAGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: TRICTLDCLMTS*QISITDLISRN
Trigger: GTTCCTGCTGATGAGGTCGGTTATCGAGATCTGCCAGGAAGTCATCAAACAGTCCAACGTACAGATCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000215919.3
ENST00000266269.10
ENST00000351933.8
ENST00000405309.7
CDS CAA 72 bp CCTGGAAAAGAGAGAACCAAGAGGGACTTTAGAAACTaGGCCAGACCCCACCACACAGGCACATATGCATAC +
Preference number: 6 (lower is better)
Translates to: PGKERTKRDFRN*ARPHHTGTYAY
Trigger: GTATGCATATGTGCCTGTGTGGTGGGGTCTGGCCAAGTTTCTAAAGTCCCTCTTGGTTCTCTCTTTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465287.1
ENST00000494109.1
CDS TCA 72 bp ACCATAGGAGTCAGAGCTCTCAATCGGATCCTGATGTaGGCATTTCTGGCCTTCTTTGTTGCCATAGGTCCT +
Preference number: 6 (lower is better)
Translates to: TIGVRALNRILM*AFLAFFVAIGP
Trigger: AGGACCTATGGCAACAAAGAAGGCCAGAAATGCTCACATCAGGATCCGATTGAGAGCTCTGACTCCTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000266269.10
ENST00000405309.7
CDS CCA 72 bp ATAGCTAGTTGGGTGATGAAGGTGTTTATCATTCAGTaGGAAGTAGGGGGTGGCTGTGCAAAGAGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: IASWVMKVFIIQ*EVGGGCAKSGV
Trigger: GACTCCACTCTTTGCACAGCCACCCCCTACTTCCCACTGAATGATAAACACCTTCATCACCCAACTAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494109.1
CDS CAA 72 bp TCACTGCAGCCTTTCCAGGAGGGGATATGTGATTCATaGTCCAGACTAAAGCCCCTTAGAAACTCAGCAATC +
Preference number: 6 (lower is better)
Translates to: SLQPFQEGICDS*SRLKPLRNSAI
Trigger: GATTGCTGAGTTTCTAAGGGGCTTTAGTCTGGACAATGAATCACATATCCCCTCCTGGAAAGGCTGCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465287.1