Pregenerated sensors for PARPBP (Homo sapiens)
Ensembl gene IDs: ENSG00000185480Ensembl transcript IDs: ENST00000327680.7, ENST00000392909.7, ENST00000392911.6, ENST00000392914.3, ENST00000412715.3, ENST00000417507.6, ENST00000457614.6, ENST00000535811.1, ENST00000537257.5, ENST00000541394.5, ENST00000541668.5, ENST00000543784.5
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGATCCCTGCTGTTTTGGCCTTTAATCAGTTGCATCTTTATCACTaGCAGTATTTGACCCCCTGCAATGCTTGGGTTTGGTATTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RIPAVLAFNQLHLYH*QYLTPCNAWVWYFS Trigger: GGAGAAATACCAAACCCAAGCATTGCAGGGGGTCAAATACTGTCAGTGATAAAGATGCAACTGATTAAAGGCCAAAACAGCAGGGATCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CCA 90 bp | AGTTTAGGGACCAGCTCCATGCTAAGAGGGACTCTCCCTTCTGCCGCTCCAGAGAGGAGCCAAGAGATCTaGCCTAGACAGCAGCAAGCT | + |
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Preference number: 2 (lower is better) Translates to: SLGTSSMLRGTLPSAAPERSQEI*PRQQQA Trigger: AGCTTGCTGCTGTCTAGGCCAGATCTCTTGGCTCCT...CTCTGGAGCGGCAGAAGGGAGAGTCCCTCTTAGCATGGAGCTGGTCCCTAAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| 3UTR-3UTR TCA 90 bp | GGGTGGCTTTCCCATTGTCTCACTTGCCGCATGACAGCTGCCAGCTTCTTCAGGAGGTGGCTGTATAGTTaGCCCCTTGAAAGAGACTTT | + |
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Preference number: 2 (lower is better) Translates to: GWLSHCLTCRMTAASFFRRWLYS*PLERDF Trigger: AAAGTCTCTTTCAAGGGGTCAACTATACAGCCACCT...CCTGAAGAAGCTGGCAGCTGTCATGCGGCAAGTGAGACAATGGGAAAGCCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| 3UTR-3UTR TCA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCACCTTGTTGGCAAGTCTaGTACCTGTTGGTCCACATC | + |
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Preference number: 2 (lower is better) Translates to: LVPIVDLPTDGFTPSERSPCWQV*YLLVHI Trigger: GATGTGGACCAACAGGTATCAGACTTGCCAACAAGG...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CCA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCAACCCCCTGCAATGCTTaGGTTTGGTATTTCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: NKAFTVSLPQYAVPWFMATPCNA*VWYFSK Trigger: CTTGGAGAAATACCAAACCCAAGCATTGCAGGGGGT...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGTTTTTGGTAGGAGCATTAGCTGCTTCTTCGTCCAAAAGAACTAATAAGATCACTGACAGTATTTaGCCCCCTGCAATGCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: ALFLVGALAASSSKRTNKITDSI*PPAMLG Trigger: CCCAAGCATTGCAGGGGGTCAAATACTGTCAGTGAT...CTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CCA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCAGGATCCCTGCTGTTTTaGCCTTTAATCAGTTGCATC | + |
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Preference number: 2 (lower is better) Translates to: NKAFTVSLPQYAVPWFMAGSLLF*PLISCI Trigger: GATGCAACTGATTAAAGGCCAAAACAGCAGGGATCC...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCGTTCTCTTAGGGGTTTTATCGAATTATTCACCTGTGTGGGAGACCTAAAATTGCATCTTTATCACTaGCAGTATTTGACCCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: MRSLRGFIELFTCVGDLKLHLYH*QYLTPC Trigger: GCAGGGGGTCAAATACTGTCAGTGATAAAGATGCAA...TTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCGTTCTCTTAGGGGTTTTATCGAATTATTCACCTGTGTGGGAGACCTAAAACAGTATTTGACCCCCTaGAATGCTTGGGTTTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: MRSLRGFIELFTCVGDLKQYLTP*NAWVWY Trigger: ATACCAAACCCAAGCATTGCAGGGGGTCAAATACTG...TTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCGTTCTCTTAGGGGTTTTATCGAATTATTCACCTGTGTGGGAGACCTAAAAATCTCTGCCACAGTATaGAGTACCATGGTTTATGGC | + |
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Preference number: 2 (lower is better) Translates to: MRSLRGFIELFTCVGDLKISATV*STMVYG Trigger: GCCATAAACCATGGTACTGCATACTGTGGCAGAGAT...TTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR TCA 90 bp | ATGCGTTCTCTTAGGGGTTTTATCGAATTATTCACCTGTGTGGGAGACCTAAAACTCAAATCCAAATCCTaGGCAACTTCCTCTATTGCT | + |
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Preference number: 2 (lower is better) Translates to: MRSLRGFIELFTCVGDLKLKSKS*ATSSIA Trigger: AGCAATAGAGGAAGTTGCTCAGGATTTGGATTTGAG...TTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR GCA 90 bp | ATGCGTTCTCTTAGGGGTTTTATCGAATTATTCACCTGTGTGGGAGACCTAAAACTTCCTCTATTGCTTTaGAAAAAGGATCCCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: MRSLRGFIELFTCVGDLKLPLLL*KKDPCC Trigger: ACAGCAGGGATCCTTTTTGCAAAGCAATAGAGGAAG...TTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR GCA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCAAGCAACTTCCTCTATTaGTTTGCAAAAAGGATCCCT | + |
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Preference number: 2 (lower is better) Translates to: NKAFTVSLPQYAVPWFMASNFLY*FAKRIP Trigger: AGGGATCCTTTTTGCAAAGCAATAGAGGAAGTTGCT...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGTTTTTGGTAGGAGCATTAGCTGCTTCTTCGTCCAAAAGAACTAATAAGCAGTACCATGGTTTATaGCATGAGATTTTGGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: ALFLVGALAASSSKRTNKQYHGL*HEILAE Trigger: CTCGGCCAAAATCTCATGCCATAAACCATGGTACTG...CTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR TCA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCATTACTTCTGTCCAGATaGACATTTCCAAAACTCGTT | + |
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Preference number: 2 (lower is better) Translates to: NKAFTVSLPQYAVPWFMALLLSR*TFPKLV Trigger: AACGAGTTTTGGAAATGTTCATCTGGACAGAAGTAA...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGTTTTTGGTAGGAGCATTAGCTGCTTCTTCGTCCAAAAGAACTAATAAGCTTTCACAGTATCTCTaGCACAGTATGCAGTACCAT | + |
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Preference number: 2 (lower is better) Translates to: ALFLVGALAASSSKRTNKLSQYL*HSMQYH Trigger: ATGGTACTGCATACTGTGGCAGAGATACTGTGAAAG...CTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CCA 90 bp | ATGCGTTCTCTTAGGGGTTTTATCGAATTATTCACCTGTGTGGGAGACCTAAAATGCAATGCTTGGGTTTaGTATTTCTCCAAGAATCTC | + |
|
Preference number: 2 (lower is better) Translates to: MRSLRGFIELFTCVGDLKCNAWV*YFSKNL Trigger: GAGATTCTTGGAGAAATACCAAACCCAAGCATTGCA...TTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CAA 90 bp | CTCTTCTTCTGGACCGTGATGGGAATCCCAGGCAATCTGAAGTTTAGGGACCAGTGTATAGTTGACCCCTaGAAAGAGACTTTCAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LFFWTVMGIPGNLKFRDQCIVDP*KETFSK Trigger: TTTGCTGAAAGTCTCTTTCAAGGGGTCAACTATACA...CTGGTCCCTAAACTTCAGATTGCCTGGGATTCCCATCACGGTCCAGAAGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| 3UTR-3UTR CAA 90 bp | ATGCGTTCTCTTAGGGGTTTTATCGAATTATTCACCTGTGTGGGAGACCTAAAAGACCCCCTGCAATGCTaGGGTTTGGTATTTCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: MRSLRGFIELFTCVGDLKDPLQC*GLVFLQ Trigger: TTGGAGAAATACCAAACCCAAGCATTGCAGGGGGTC...TTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR TCA 72 bp | GCTGTTTTGGCCTTTAATCAGTTGCATCTTTATCACTaGCAGTATTTGACCCCCTGCAATGCTTGGGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: AVLAFNQLHLYH*QYLTPCNAWVW Trigger: CCAAACCCAAGCATTGCAGGGGGTCAAATACTGTCAGTGATAAAGATGCAACTGATTAAAGGCCAAAACAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CAA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCAAGGATCCCTGCTGTTTaGGCCTTTAATCAGTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LVPIVDLPTDGFTPSERSRIPAV*AFNQLH Trigger: ATGCAACTGATTAAAGGCCAAAACAGCAGGGATCCT...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CAA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCAACTTCCTCTATTGCTTaGCAAAAAGGATCCCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: NKAFTVSLPQYAVPWFMATSSIA*QKGSLL Trigger: CAGCAGGGATCCTTTTTGCAAAGCAATAGAGGAAGT...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CAA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCAAGCTCTGCTTTGTTTTaGGTAGGAGCATTAGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: LVPIVDLPTDGFTPSERSSSALF*VGALAA Trigger: AGCAGCTAATGCTCCTACCAAAAACAAAGCAGAGCT...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CAA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCATGGCCAGAAATCAACTaGTCCTTGGCAGTACATTTA | + |
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Preference number: 3 (lower is better) Translates to: NKAFTVSLPQYAVPWFMAWPEIN*SLAVHL Trigger: TAAATGTACTGCCAAGGACAAGTTGATTTCTGGCCA...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR GCA 72 bp | AATCCTCAAATCCAAATCCTGAGCAACTTCCTCTATTaGTTTGCAAAAAGGATCCCTGCTGTTTTGGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: NPQIQILSNFLY*FAKRIPAVLAF Trigger: AAAGGCCAAAACAGCAGGGATCCTTTTTGCAAAGCAATAGAGGAAGTTGCTCAGGATTTGGATTTGAGGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CAA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCAGCTACTTTAGCTAGTTaGCCGTACAATCTATTCTGT | + |
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Preference number: 3 (lower is better) Translates to: LVPIVDLPTDGFTPSERSATLAS*PYNLFC Trigger: ACAGAATAGATTGTACGGCAAACTAGCTAAAGTAGC...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CAA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCAAAAACTGAGTTAACTTaGCCTGGCCAGAAATCAACT | + |
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Preference number: 3 (lower is better) Translates to: LVPIVDLPTDGFTPSERSKTELT*PGQKST Trigger: AGTTGATTTCTGGCCAGGCAAAGTTAACTCAGTTTT...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CAA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCACAAAACTCGTTCCAATaGTTGATCTTCCAACAGATG | + |
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Preference number: 3 (lower is better) Translates to: NKAFTVSLPQYAVPWFMAQNSFQ*LIFQQM Trigger: CATCTGTTGGAAGATCAACAATTGGAACGAGTTTTG...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CAA 90 bp | ATGCGTTCTCTTAGGGGTTTTATCGAATTATTCACCTGTGTGGGAGACCTAAAACTGCAATGCTTGGGTTaGGTATTTCTCCAAGAATCT | + |
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Preference number: 3 (lower is better) Translates to: MRSLRGFIELFTCVGDLKLQCLG*VFLQES Trigger: AGATTCTTGGAGAAATACCAAACCCAAGCATTGCAG...TTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CAA 90 bp | GCTTTGTTTTTGGTAGGAGCATTAGCTGCTTCTTCGTCCAAAAGAACTAATAAGGAGCAACTTCCTCTATaGCTTTGCAAAAAGGATCCC | + |
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Preference number: 3 (lower is better) Translates to: ALFLVGALAASSSKRTNKEQLPL*LCKKDP Trigger: GGGATCCTTTTTGCAAAGCAATAGAGGAAGTTGCTC...CTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR TCA 72 bp | GTCCAGATGAACATTTCCAAAACTCGTTCCAATTGTTaGTCTTCCAACAGATGGATTTACACCCTCAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: VQMNISKTRSNC*SSNRWIYTLRK Trigger: CTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAGTTTTGGAAATGTTCATCTGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| 3UTR-3UTR CAA 90 bp | GCTTTGTTTTTGGTAGGAGCATTAGCTGCTTCTTCGTCCAAAAGAACTAATAAGAACTCGTTCCAATTGTaGATCTTCCAACAGATGGAT | + |
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Preference number: 3 (lower is better) Translates to: ALFLVGALAASSSKRTNKNSFQL*IFQQMD Trigger: ATCCATCTGTTGGAAGATCAACAATTGGAACGAGTT...CTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| CDS-3UTR GCA 90 bp | TCCCCAGGAGCCAAGAGATCTGGCCTAGACAGCAGCAAGCTTCCTCTTTCTGAAGGATCCCCAACGGGATaGCCTCCCGCGGCCGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SPGAKRSGLDSSKLPLSEGSPTG*PPAAAA Trigger: TGCGGCGGCCGCGGGAGGGCATCCCGTTGGGGATCC...TTCAGAAAGAGGAAGCTTGCTGCTGTCTAGGCCAGATCTCTTGGCTCCTGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR GCA 90 bp | ACCAGCTCCATGCTAAGAGGGACTCTCCCTTCTGCCGCTCCAGAGTCAATGAGGTTGCCGCATGACAGCTaGCAGCTTCTTCAGGTCTCG | + |
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Preference number: 4 (lower is better) Translates to: TSSMLRGTLPSAAPESMRLPHDS*QLLQVS Trigger: CGAGACCTGAAGAAGCTGGCAGCTGTCATGCGGCAA...CCTCATTGACTCTGGAGCGGCAGAAGGGAGAGTCCCTCTTAGCATGGAGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR GCA 90 bp | GGGTGGCTTTCCCATTGTCTCACTTGCCGCATGACAGCTGCCAGCTTCTTCAGGTCCCATTGTCTCACTTaGCGCATGACAGCTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GWLSHCLTCRMTAASFFRSHCLT*RMTAAS Trigger: GCTGGCAGCTGTCATGCGGCAAGTGAGACAATGGGA...CCTGAAGAAGCTGGCAGCTGTCATGCGGCAAGTGAGACAATGGGAAAGCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR TCA 90 bp | GGGTGGCTTTCCCATTGTCTCACTTGCCGCATGACAGCTGCCAGCTTCTTCAGGTCTTCTTCTGGACCGTaGTGGGAATCCCAGGCAATC | + |
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Preference number: 4 (lower is better) Translates to: GWLSHCLTCRMTAASFFRSSSGP*WESQAI Trigger: GATTGCCTGGGATTCCCATCACGGTCCAGAAGAAGA...CCTGAAGAAGCTGGCAGCTGTCATGCGGCAAGTGAGACAATGGGAAAGCCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR TCA 90 bp | AAGTTTAGGGACCAGCTCCATGCTAAGAGGGACTCTCCCTTCTGCCGCTCCAGAGTCTCACTTGCCGCATaGCAGCTGCCAGCTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: KFRDQLHAKRDSPFCRSRVSLAA*QLPASS Trigger: TGAAGAAGCTGGCAGCTGTCATGCGGCAAGTGAGAC...TCTGGAGCGGCAGAAGGGAGAGTCCCTCTTAGCATGGAGCTGGTCCCTAAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR GCA 90 bp | TTCAGGTCTCGTCTCTTCTTCTGGACCGTGATGGGAATCCCAGGCAATCTGAAGACGTACTCTTCAGTGTaGGGAAGGATCCCCAACGGG | + |
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Preference number: 4 (lower is better) Translates to: FRSRLFFWTVMGIPGNLKTYSSV*GRIPNG Trigger: CCCGTTGGGGATCCTTCCGCACACTGAAGAGTACGT...CTTCAGATTGCCTGGGATTCCCATCACGGTCCAGAAGAAGAGACGAGACCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR GCA 90 bp | AAGTTTAGGGACCAGCTCCATGCTAAGAGGGACTCTCCCTTCTGCCGCTCCAGATCCGCCATAGAAAGCTaGAATGCCAAGAGCATGGAG | + |
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Preference number: 4 (lower is better) Translates to: KFRDQLHAKRDSPFCRSRSAIES*NAKSME Trigger: CTCCATGCTCTTGGCATTGCAGCTTTCTATGGCGGA...TCTGGAGCGGCAGAAGGGAGAGTCCCTCTTAGCATGGAGCTGGTCCCTAAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR GCA 90 bp | ACCAGCTCCATGCTAAGAGGGACTCTCCCTTCTGCCGCTCCAGAGTCAATGAGGGTAAATTCTCCACTGTaGTGTTTGTTGTTCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: TSSMLRGTLPSAAPESMRVNSPL*CLLFSA Trigger: GGCGGAGAACAACAAACAGCACAGTGGAGAATTTAC...CCTCATTGACTCTGGAGCGGCAGAAGGGAGAGTCCCTCTTAGCATGGAGCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR CCA 90 bp | TTCCCATTGTCTCACTTGCCGCATGACAGCTGCCAGCTTCTTCAGGTCTCGTCTTCTCGTCTCTTCTTCTaGACCGTGATGGGAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: FPLSHLPHDSCQLLQVSSSRLFF*TVMGIP Trigger: TGGGATTCCCATCACGGTCCAGAAGAAGAGACGAGA...AGACGAGACCTGAAGAAGCTGGCAGCTGTCATGCGGCAAGTGAGACAATGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR TCA 90 bp | AAGTTTAGGGACCAGCTCCATGCTAAGAGGGACTCTCCCTTCTGCCGCTCCAGAAGGTGGCTGTATAGTTaGCCCCTTGAAAGAGACTTT | + |
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Preference number: 4 (lower is better) Translates to: KFRDQLHAKRDSPFCRSRRWLYS*PLERDF Trigger: AAAGTCTCTTTCAAGGGGTCAACTATACAGCCACCT...TCTGGAGCGGCAGAAGGGAGAGTCCCTCTTAGCATGGAGCTGGTCCCTAAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR GCA 90 bp | TTCCCATTGTCTCACTTGCCGCATGACAGCTGCCAGCTTCTTCAGGTCTCGTCTCATAGAAAGCTGCAATaGCAAGAGCATGGAGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: FPLSHLPHDSCQLLQVSSHRKLQ*QEHGVC Trigger: GCAGACTCCATGCTCTTGGCATTGCAGCTTTCTATG...AGACGAGACCTGAAGAAGCTGGCAGCTGTCATGCGGCAAGTGAGACAATGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR CCA 90 bp | TTCAGGTCTCGTCTCTTCTTCTGGACCGTGATGGGAATCCCAGGCAATCTGAAGGCAATGCCAAGAGCATaGAGTCTGCACCACATAGAG | + |
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Preference number: 4 (lower is better) Translates to: FRSRLFFWTVMGIPGNLKAMPRA*SLHHIE Trigger: CTCTATGTGGTGCAGACTCCATGCTCTTGGCATTGC...CTTCAGATTGCCTGGGATTCCCATCACGGTCCAGAAGAAGAGACGAGACCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR CCA 90 bp | AGTTTAGGGACCAGCTCCATGCTAAGAGGGACTCTCCCTTCTGCCGCTCCAGAGACTTTTTCCCCGCACTaGAAATTTCCAGGAGATACT | + |
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Preference number: 4 (lower is better) Translates to: SLGTSSMLRGTLPSAAPETFSPH*KFPGDT Trigger: AGTATCTCCTGGAAATTTCCAGTGCGGGGAAAAAGT...CTCTGGAGCGGCAGAAGGGAGAGTCCCTCTTAGCATGGAGCTGGTCCCTAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392909.7 |
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| CDS-3UTR TCA 90 bp | AAGTTTAGGGACCAGCTCCATGCTAAGAGGGACTCTCCCTTCTGCCGCTCCAGATCCGAGACAGACTTCTaGTTAAACACAGCCATTATG | + |
|
Preference number: 4 (lower is better) Translates to: KFRDQLHAKRDSPFCRSRSETDF*LNTAIM Trigger: CATAATGGCTGTGTTTAATCAGAAGTCTGTCTCGGA...TCTGGAGCGGCAGAAGGGAGAGTCCCTCTTAGCATGGAGCTGGTCCCTAAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
||
| CDS-3UTR TCA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCACCATGGTTTATGGCATaGGATTTTGGCCGAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKAFTVSLPQYAVPWFMAPWFMA*DFGRAG Trigger: TCCTGCTCGGCCAAAATCTCATGCCATAAACCATGG...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CCA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCAACCCCCTGCAATGCTTaGGTTTGGTATTTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVPIVDLPTDGFTPSERSTPCNA*VWYFSK Trigger: CTTGGAGAAATACCAAACCCAAGCATTGCAGGGGGT...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CCA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCATATGGCATGAGATTTTaGCCGAGCAGGACTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVPIVDLPTDGFTPSERSYGMRF*PSRTDV Trigger: GACATCAGTCCTGCTCGGCCAAAATCTCATGCCATA...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR TCA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCATTGCATCTTTATCACTaGCAGTATTTGACCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVPIVDLPTDGFTPSERSLHLYH*QYLTPC Trigger: GCAGGGGGTCAAATACTGTCAGTGATAAAGATGCAA...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR TCA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCATGTAGCTTTCCCAGCTaGGAATGGAGTTCAGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LVPIVDLPTDGFTPSERSCSFPS*EWSSEY Trigger: GTATTCTGAACTCCATTCTCAGCTGGGAAAGCTACA...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR GCA 90 bp | ATGCGTTCTCTTAGGGGTTTTATCGAATTATTCACCTGTGTGGGAGACCTAAAACATAGAAAGCTGCAATaGCAAGAGCATGGAGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MRSLRGFIELFTCVGDLKHRKLQ*QEHGVC Trigger: GCAGACTCCATGCTCTTGGCATTGCAGCTTTCTATG...TTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR GCA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCACAGTATTTGACCCCCTaGAATGCTTGGGTTTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NKAFTVSLPQYAVPWFMAQYLTP*NAWVWY Trigger: ATACCAAACCCAAGCATTGCAGGGGGTCAAATACTG...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CCA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCAGGATCCCTGCTGTTTTaGCCTTTAATCAGTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LVPIVDLPTDGFTPSERSGSLLF*PLISCI Trigger: GATGCAACTGATTAAAGGCCAAAACAGCAGGGATCC...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CCA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCACAGTACCATGGTTTATaGCATGAGATTTTGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVPIVDLPTDGFTPSERSQYHGL*HEILAE Trigger: CTCGGCCAAAATCTCATGCCATAAACCATGGTACTG...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR TCA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCACTCAAATCCAAATCCTaGGCAACTTCCTCTATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKAFTVSLPQYAVPWFMALKSKS*ATSSIA Trigger: AGCAATAGAGGAAGTTGCTCAGGATTTGGATTTGAG...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR GCA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCACTTTCACAGTATCTCTaGCACAGTATGCAGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVPIVDLPTDGFTPSERSLSQYL*HSMQYH Trigger: ATGGTACTGCATACTGTGGCAGAGATACTGTGAAAG...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR GCA 90 bp | ATGCGTTCTCTTAGGGGTTTTATCGAATTATTCACCTGTGTGGGAGACCTAAAAGGTAGGAGCATTAGCTaGTTCTTCGTCCAAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MRSLRGFIELFTCVGDLKGRSIS*FFVQKN Trigger: GTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACC...TTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR GCA 90 bp | GCTTTGTTTTTGGTAGGAGCATTAGCTGCTTCTTCGTCCAAAAGAACTAATAAGATCTCTGCCACAGTATaGAGTACCATGGTTTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALFLVGALAASSSKRTNKISATV*STMVYG Trigger: GCCATAAACCATGGTACTGCATACTGTGGCAGAGAT...CTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR GCA 90 bp | ATGCGTTCTCTTAGGGGTTTTATCGAATTATTCACCTGTGTGGGAGACCTAAAAGCATTGACACACAGATaGGTTCTCTTAGGGGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: MRSLRGFIELFTCVGDLKALTHR*VLLGVL Trigger: TAAAACCCCTAAGAGAACGCATCTGTGTGTCAATGC...TTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR TCA 90 bp | ATGCGTTCTCTTAGGGGTTTTATCGAATTATTCACCTGTGTGGGAGACCTAAAAACTCGTTCCAATTGTTaGTCTTCCAACAGATGGATT | + |
|
Preference number: 4 (lower is better) Translates to: MRSLRGFIELFTCVGDLKTRSNC*SSNRWI Trigger: AATCCATCTGTTGGAAGATCAACAATTGGAACGAGT...TTTTAGGTCTCCCACACAGGTGAATAATTCGATAAAACCCCTAAGAGAACGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR TCA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCATTACTTCTGTCCAGATaGACATTTCCAAAACTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVPIVDLPTDGFTPSERSLLLSR*TFPKLV Trigger: AACGAGTTTTGGAAATGTTCATCTGGACAGAAGTAA...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR TCA 90 bp | GCTTTGTTTTTGGTAGGAGCATTAGCTGCTTCTTCGTCCAAAAGAACTAATAAGAGAAAATCCAGTAGTTaGCTCTGTTTGTTGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALFLVGALAASSSKRTNKRKSSS*LCLLFS Trigger: GGAGAACAACAAACAGAGTCAACTACTGGATTTTCT...CTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR GCA 90 bp | GCTTTGTTTTTGGTAGGAGCATTAGCTGCTTCTTCGTCCAAAAGAACTAATAAGCTACTGCATACTGTTTaGCAGACAGAAAATCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALFLVGALAASSSKRTNKLLHTV*QTENPV Trigger: TACTGGATTTTCTGTCTGGCAAACAGTATGCAGTAG...CTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CCA 90 bp | GCTTTGTTTTTGGTAGGAGCATTAGCTGCTTCTTCGTCCAAAAGAACTAATAAGTGCAATGCTTGGGTTTaGTATTTCTCCAAGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALFLVGALAASSSKRTNKCNAWV*YFSKNL Trigger: GAGATTCTTGGAGAAATACCAAACCCAAGCATTGCA...CTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| 3UTR CAA 72 bp | TGTCCAGATGAACATTTCCAAAACTCGTTCCAATTGTaGATCTTCCAACAGATGGATTTACACCCTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CPDEHFQNSFQL*IFQQMDLHPQK Trigger: TTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAGTTTTGGAAATGTTCATCTGGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTAGGGACCAGCTCCATGCTAAGAGGGACTCTCCCTTCTGCCGCTCCAGAGTTCCCATTGTCTCACTaGCCGCATGACAGCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLGTSSMLRGTLPSAAPEFPLSH*PHDSCQ Trigger: CTGGCAGCTGTCATGCGGCAAGTGAGACAATGGGAA...CTCTGGAGCGGCAGAAGGGAGAGTCCCTCTTAGCATGGAGCTGGTCCCTAAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
||
| CDS-3UTR CAA 90 bp | AAGTTTAGGGACCAGCTCCATGCTAAGAGGGACTCTCCCTTCTGCCGCTCCAGACCACTGTGCTGTTTGTaGTTCTCCGCCATAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KFRDQLHAKRDSPFCRSRPLCCL*FSAIES Trigger: GCTTTCTATGGCGGAGAACAACAAACAGCACAGTGG...TCTGGAGCGGCAGAAGGGAGAGTCCCTCTTAGCATGGAGCTGGTCCCTAAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
||
| CDS GCA 90 bp | CTTGCTAGCAGCTGCACCTGTTTGTTGTTCTCCGCCATAGAAAGCTaGAATGCCAAGAGCATGGAGTCTGCACCACATAGAGTAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LASSCTCLLFSAIES*NAKSMESAPHRVVL Trigger: GAGAACTACTCTATGTGGTGCAGACTCCATGCTCTTGGCATTGCAGCTTTCTATGGCGGAGAACAACAAACAGGTGCAGCTGCTAGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543784.5 |
||
| CDS-3UTR CAA 90 bp | CTCTTCTTCTGGACCGTGATGGGAATCCCAGGCAATCTGAAGTTTAGGGACCAGTCTCCACTGTGCTGTTaGTTGTTCTCCGCCATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LFFWTVMGIPGNLKFRDQSPLCC*LFSAIE Trigger: TTCTATGGCGGAGAACAACAAACAGCACAGTGGAGA...CTGGTCCCTAAACTTCAGATTGCCTGGGATTCCCATCACGGTCCAGAAGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392909.7 |
||
| CDS-3UTR CAA 90 bp | TGGATCTTCCCCAGGAGCCAAGAGATCTGGCCTAGACAGCAGCAAGCTTCCTCTTGTATAGTTGACCCCTaGAAAGAGACTTTCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: WIFPRSQEIWPRQQQASSCIVDP*KETFSK Trigger: TTTGCTGAAAGTCTCTTTCAAGGGGTCAACTATACA...AGAGGAAGCTTGCTGCTGTCTAGGCCAGATCTCTTGGCTCCTGGGGAAGATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392909.7 |
||
| CDS GCA 90 bp | GTAAATTCTCCACTGTGCTGTTTGTTGTTCTCCGCCATAGAAAGCTaGAATGCCAAGAGCATGGAGTCTGCACCACATAGAGTAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VNSPLCCLLFSAIES*NAKSMESAPHRVVL Trigger: GAGAACTACTCTATGTGGTGCAGACTCCATGCTCTTGGCATTGCAGCTTTCTATGGCGGAGAACAACAAACAGCACAGTGGAGAATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000327680.7 ENST00000392909.7 ENST00000392914.3 ENST00000537257.5 ENST00000541394.5 ENST00000541668.5 |
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| CDS-3UTR CAA 90 bp | GCTTTGTTTTTGGTAGGAGCATTAGCTGCTTCTTCGTCCAAAAGAACTAATAAGGACCCCCTGCAATGCTaGGGTTTGGTATTTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALFLVGALAASSSKRTNKDPLQC*GLVFLQ Trigger: TTGGAGAAATACCAAACCCAAGCATTGCAGGGGGTC...CTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| CDS-3UTR CAA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCAAGGATCCCTGCTGTTTaGGCCTTTAATCAGTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: NKAFTVSLPQYAVPWFMARIPAV*AFNQLH Trigger: ATGCAACTGATTAAAGGCCAAAACAGCAGGGATCCT...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457614.6 |
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| CDS-3UTR CAA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCAACTTCCTCTATTGCTTaGCAAAAAGGATCCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVPIVDLPTDGFTPSERSTSSIA*QKGSLL Trigger: CAGCAGGGATCCTTTTTGCAAAGCAATAGAGGAAGT...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CAA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCAGAGCAACTTCCTCTATaGCTTTGCAAAAAGGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVPIVDLPTDGFTPSERSEQLPL*LCKKDP Trigger: GGGATCCTTTTTGCAAAGCAATAGAGGAAGTTGCTC...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CAA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCAAGCTCTGCTTTGTTTTaGGTAGGAGCATTAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NKAFTVSLPQYAVPWFMASSALF*VGALAA Trigger: AGCAGCTAATGCTCCTACCAAAAACAAAGCAGAGCT...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CAA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCACTGCAATGCTTGGGTTaGGTATTTCTCCAAGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: NKAFTVSLPQYAVPWFMALQCLG*VFLQES Trigger: AGATTCTTGGAGAAATACCAAACCCAAGCATTGCAG...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CAA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCATGGCCAGAAATCAACTaGTCCTTGGCAGTACATTTA | + |
|
Preference number: 5 (lower is better) Translates to: LVPIVDLPTDGFTPSERSWPEIN*SLAVHL Trigger: TAAATGTACTGCCAAGGACAAGTTGATTTCTGGCCA...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CAA 90 bp | GCTTTGTTTTTGGTAGGAGCATTAGCTGCTTCTTCGTCCAAAAGAACTAATAAGCCTACTGCATACTGTTaGCCAGACAGAAAATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALFLVGALAASSSKRTNKPTAYC*PDRKSS Trigger: ACTGGATTTTCTGTCTGGCAAACAGTATGCAGTAGG...CTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CAA 90 bp | AATAAGGCTTTCACAGTATCTCTGCCACAGTATGCAGTACCATGGTTTATGGCAAACTCGTTCCAATTGTaGATCTTCCAACAGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NKAFTVSLPQYAVPWFMANSFQL*IFQQMD Trigger: ATCCATCTGTTGGAAGATCAACAATTGGAACGAGTT...TGCCATAAACCATGGTACTGCATACTGTGGCAGAGATACTGTGAAAGCCTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CAA 90 bp | CTCGTTCCAATTGTTGATCTTCCAACAGATGGATTTACACCCTCAGAAAGGTCACAAAACTCGTTCCAATaGTTGATCTTCCAACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LVPIVDLPTDGFTPSERSQNSFQ*LIFQQM Trigger: CATCTGTTGGAAGATCAACAATTGGAACGAGTTTTG...TGACCTTTCTGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS-3UTR CAA 90 bp | GCTTTGTTTTTGGTAGGAGCATTAGCTGCTTCTTCGTCCAAAAGAACTAATAAGAAAACTGAGTTAACTTaGCCTGGCCAGAAATCAACT | + |
|
Preference number: 5 (lower is better) Translates to: ALFLVGALAASSSKRTNKKTELT*PGQKST Trigger: AGTTGATTTCTGGCCAGGCAAAGTTAACTCAGTTTT...CTTATTAGTTCTTTTGGACGAAGAAGCAGCTAATGCTCCTACCAAAAACAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000457614.6 |
||
| CDS GCA 72 bp | GCCCCCAGGCCCAACCAGGCTCGAGCGTCAAGTCACTaGACCATAATACTTCGGTCCCACGGCACTTTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: APRPNQARASSH*TIILRSHGTLL Trigger: TAGCAAAGTGCCGTGGGACCGAAGTATTATGGTGCAGTGACTTGACGCTCGAGCCTGGTTGGGCCTGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541668.5 |
||
| CDS TCA 72 bp | CTTGGGTCCCTGGTTCCTTCTTCTCAGCTTGGACAGTaGGTTGGTGCCAGGTGGCTTCTTCAATGTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LGSLVPSSQLGQ*VGARWLLQCSE Trigger: TTCAGAACATTGAAGAAGCCACCTGGCACCAACTCACTGTCCAAGCTGAGAAGAAGGAACCAGGGACCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392914.3 |
||
| CDS GCA 72 bp | CCACTGTGCTGTTTGTTGTTCTCCGCCATAGAAAGCTaGAATGCCAAGAGCATGGAGTCTGCACCACATAGA | + |
|
Preference number: 6 (lower is better) Translates to: PLCCLLFSAIES*NAKSMESAPHR Trigger: TCTATGTGGTGCAGACTCCATGCTCTTGGCATTGCAGCTTTCTATGGCGGAGAACAACAAACAGCACAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000327680.7 ENST00000392909.7 ENST00000392914.3 ENST00000537257.5 ENST00000541394.5 ENST00000541668.5 |
||
| CDS GCA 72 bp | AGCTGCACCTGTTTGTTGTTCTCCGCCATAGAAAGCTaGAATGCCAAGAGCATGGAGTCTGCACCACATAGA | + |
|
Preference number: 6 (lower is better) Translates to: SCTCLLFSAIES*NAKSMESAPHR Trigger: TCTATGTGGTGCAGACTCCATGCTCTTGGCATTGCAGCTTTCTATGGCGGAGAACAACAAACAGGTGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000543784.5 |
||
| CDS GCA 72 bp | ATTCTCCACTGTTTGTTGTTCTCCGCCATAGAAAGCTaGAATGCCAAGAGCATGGAGTCTGCACCACATAGA | + |
|
Preference number: 6 (lower is better) Translates to: ILHCLLFSAIES*NAKSMESAPHR Trigger: TCTATGTGGTGCAGACTCCATGCTCTTGGCATTGCAGCTTTCTATGGCGGAGAACAACAAACAGTGGAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392911.6 |
||
| CDS TCA 72 bp | GTCCAGATGAACATTTCCAAAACTCGTTCCAATTGTTaGTCTTCCAACAGATGGATTTACACCCTCTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VQMNISKTRSNC*SSNRWIYTLLG Trigger: ACCCAAGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAGTTTTGGAAATGTTCATCTGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412715.3 ENST00000543784.5 |
||
| CDS CAA 72 bp | TGTCCAGATGAACATTTCCAAAACTCGTTCCAATTGTaGATCTTCCAACAGATGGATTTACACCCTCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CPDEHFQNSFQL*IFQQMDLHPLG Trigger: CCCAAGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAGTTTTGGAAATGTTCATCTGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412715.3 ENST00000543784.5 |
||
| CDS TCA 72 bp | ACATTTGTTTCTCTCGAGCAGCATGTTTCAAATCAGTaGAGGCTTCTCTTCCTAGTCCTCTATCAGGAATAT | + |
|
Preference number: 6 (lower is better) Translates to: TFVSLEQHVSNQ*RLLFLVLYQEY Trigger: ATATTCCTGATAGAGGACTAGGAAGAGAAGCCTTCACTGATTTGAAACATGCTGCTCGAGAGAAACAAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000327680.7 ENST00000392911.6 ENST00000412715.3 ENST00000417507.6 ENST00000541394.5 ENST00000543784.5 |
||
| CDS TCA 72 bp | GTCCAGATGAACATTTCCAAAACTCGTTCCAATTGTTaGTCTTCCAACAGATGGATTTACACCCTCTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VQMNISKTRSNC*SSNRWIYTLCL Trigger: CAAACAGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAGTTTTGGAAATGTTCATCTGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535811.1 |
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| CDS TCA 72 bp | TTTCGAAACTCTTTAATCATATCCGAGACAGACTTCTaGTTAAACACAGCCATTATCAGCTCCATCGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: FRNSLIISETDF*LNTAIISSIAR Trigger: TCTAGCGATGGAGCTGATAATGGCTGTGTTTAATCAGAAGTCTGTCTCGGATATGATTAAAGAGTTTCGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541668.5 |
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| CDS CAA 72 bp | TGTCCAGATGAACATTTCCAAAACTCGTTCCAATTGTaGATCTTCCAACAGATGGATTTACACCCTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: CPDEHFQNSFQL*IFQQMDLHPLF Trigger: AAACAGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAGTTTTGGAAATGTTCATCTGGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000535811.1 |
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| CDS TCA 72 bp | GTCCAGATGAACATTTCCAAAACTCGTTCCAATTGTTaGTCTTCCAACAGATGGATTTACACCCTCTTAATT | + |
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Preference number: 6 (lower is better) Translates to: VQMNISKTRSNC*SSNRWIYTLLI Trigger: AATTAAGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAGTTTTGGAAATGTTCATCTGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417507.6 |
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| CDS CCA 72 bp | CTGGAATCAGTAGAAAGGAGTCTCTGGTTTAAGATATaGGATTGTGAAGACCAAGGTTCTTATTATGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: LESVERSLWFKI*DCEDQGSYYVD Trigger: ATCTACATAATAAGAACCTTGGTCTTCACAATCCCATATCTTAAACCAGAGACTCCTTTCTACTGATTCCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000541668.5 |
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| CDS CAA 72 bp | TGTCCAGATGAACATTTCCAAAACTCGTTCCAATTGTaGATCTTCCAACAGATGGATTTACACCCTCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: CPDEHFQNSFQL*IFQQMDLHPLN Trigger: ATTAAGAGGGTGTAAATCCATCTGTTGGAAGATCAACAATTGGAACGAGTTTTGGAAATGTTCATCTGGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417507.6 |
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