Pregenerated sensors for PARP4 (Homo sapiens)
Ensembl gene IDs: ENSG00000102699Ensembl transcript IDs: ENST00000381989.4, ENST00000480576.1, ENST00000484989.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTGCTCAAGGTCACGGCTAAGCTAATGAGTGGCCAACCCAGGTTCTaGGACTCAGGCAGTCTGGCTGGGAGCCCGGAGCCCCATCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLKVTAKLMSGQPRF*DSGSLAGSPEPHPS Trigger: AGAGGGATGGGGCTCCGGGCTCCCAGCCAGACTGCCTGAGTCTCAGAACCTGGGTTGGCCACTCATTAGCTTAGCCGTGACCTTGAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484989.1 |
||
| CDS CCA 90 bp | TGCGGGCGGCTCCTCTTCACGAGCTGTAATGTCAGGCTCTCATCCTaGAGGTGCCCATCAGACACCAGGAGGATGTTCCGTGACCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: CGRLLFTSCNVRLSS*RCPSDTRRMFRDPR Trigger: TCGAGGGTCACGGAACATCCTCCTGGTGTCTGATGGGCACCTCCAGGATGAGAGCCTGACATTACAGCTCGTGAAGAGGAGCCGCCCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381989.4 ENST00000484989.1 |
||
| CDS GCA 90 bp | CAGCTCTCTGAGACTCACCCGATACCGCAGGCGAATAACCTGGTGTaGGGGCGGCTCCTCTTCACGAGCTGTAATGTCAGGCTCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: QLSETHPIPQANNLV*GRLLFTSCNVRLSS Trigger: GGATGAGAGCCTGACATTACAGCTCGTGAAGAGGAGCCGCCCGCACACCAGGTTATTCGCCTGCGGTATCGGGTGAGTCTCAGAGAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484989.1 |
||
| CDS CCA 90 bp | GTGACCAGCTCTCTGAGACTCACCCGATACCGCAGGCGAATAACCTaGTGTGCGGGCGGCTCCTCTTCACGAGCTGTAATGTCAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTSSLRLTRYRRRIT*CAGGSSSRAVMSGS Trigger: AGAGCCTGACATTACAGCTCGTGAAGAGGAGCCGCCCGCACACCAGGTTATTCGCCTGCGGTATCGGGTGAGTCTCAGAGAGCTGGTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484989.1 |
||
| CDS CCA 90 bp | TCTGCTTCTCACCCACCAAGGACAGCGCATGCAAGGCGATTTGCTTaGCTTGCAAGAATGTCACACCCTCCATGGAACTGGAGCAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SASHPPRTAHARRFA*LARMSHPPWNWSSQ Trigger: TTGACTGCTCCAGTTCCATGGAGGGTGTGACATTCTTGCAAGCCAAGCAAATCGCCTTGCATGCGCTGTCCTTGGTGGGTGAGAAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381989.4 ENST00000484989.1 |
||
| CDS GCA 90 bp | TTCTCACCCACCAAGGACAGCGCATGCAAGGCGATTTGCTTGGCTTaGAAGAATGTCACACCCTCCATGGAACTGGAGCAGTCAAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: FSPTKDSACKAICLA*KNVTPSMELEQSRQ Trigger: TTGTCTTGACTGCTCCAGTTCCATGGAGGGTGTGACATTCTTGCAAGCCAAGCAAATCGCCTTGCATGCGCTGTCCTTGGTGGGTGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CCA 90 bp | TTGAGGCTAATCCTGTTCACTGGCTTGAGAAGCATGTGTTCCAGGTaGCCCAGGGCCTCTGCCCAAATCATCTCTACTAAATCGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LRLILFTGLRSMCSR*PRASAQIISTKSLT Trigger: GGTGAGCGATTTAGTAGAGATGATTTGGGCAGAGGCCCTGGGCCACCTGGAACACATGCTTCTCAAGCCAGTGAACAGGATTAGCCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS GCA 90 bp | TGTATCCTGAAGGTTTTCATTCAAAGCCTTGTCCTGTTGCCAGGGTaGTACGGTGGCGGGCATGAAAAAGACACCAACAGTGCCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CILKVFIQSLVLLPG*YGGGHEKDTNSAQD Trigger: ATCCTGGGCACTGTTGGTGTCTTTTTCATGCCCGCCACCGTAGCACCCTGGCAACAGGACAAGGCTTTGAATGAAAACCTTCAGGATACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CCA 90 bp | CCCAGGGCCTCTGCCCAAATCATCTCTACTAAATCGCTCACCTCTTaGCTCAGAGTGCTTGAATTCATGACTTCCTCCAAAAGCAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRASAQIISTKSLTS*LRVLEFMTSSKSNA Trigger: AGCATTGCTTTTGGAGGAAGTCATGAATTCAAGCACTCTGAGCCAAGAGGTGAGCGATTTAGTAGAGATGATTTGGGCAGAGGCCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS GCA 90 bp | TGGATAATATTTACTTTCTGCTTCTCACCCACCAAGGACAGCGCATaGAAGGCGATTTGCTTGGCTTGCAAGAATGTCACACCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: WIIFTFCFSPTKDSA*KAICLACKNVTPSM Trigger: CATGGAGGGTGTGACATTCTTGCAAGCCAAGCAAATCGCCTTGCATGCGCTGTCCTTGGTGGGTGAGAAGCAGAAAGTAAATATTATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381989.4 ENST00000484989.1 |
||
| CDS TCA 90 bp | CTGTTTTCACTTCAGAACTGCTCGCCTTCTGATCAGGAGGTGGTGTaGTGTCCAGGGGCTTATAAGGATCATAATTCTTTACATCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFSLQNCSPSDQEVV*CPGAYKDHNSLHPR Trigger: TCTTGGATGTAAAGAATTATGATCCTTATAAGCCCCTGGACATCACACCACCTCCTGATCAGAAGGCGAGCAGTTCTGAAGTGAAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CCA 90 bp | ACCTTCTGTTTTCACTTCAGAACTGCTCGCCTTCTGATCAGGAGGTaGTGTGATGTCCAGGGGCTTATAAGGATCATAATTCTTTACATC | + |
|
Preference number: 5 (lower is better) Translates to: TFCFHFRTARLLIRR*CDVQGLIRIIILYI Trigger: GATGTAAAGAATTATGATCCTTATAAGCCCCTGGACATCACACCACCTCCTGATCAGAAGGCGAGCAGTTCTGAAGTGAAAACAGAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CCA 90 bp | ATGCTCAATTTTGCACCTCAAAGCTCGGTATTTGGCCAGGGATGGTaGGTTGGGTTTGGACAAATTAGTTTCACAGACATTAACCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: MLNFAPQSSVFGQGW*VGFGQISFTDINHV Trigger: GACATGGTTAATGTCTGTGAAACTAATTTGTCCAAACCCAACCCACCATCCCTGGCCAAATACCGAGCTTTGAGGTGCAAAATTGAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CCA 90 bp | AACATGCTCAATTTTGCACCTCAAAGCTCGGTATTTGGCCAGGGATaGTGGGTTGGGTTTGGACAAATTAGTTTCACAGACATTAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: NMLNFAPQSSVFGQG*WVGFGQISFTDINH Trigger: ATGGTTAATGTCTGTGAAACTAATTTGTCCAAACCCAACCCACCATCCCTGGCCAAATACCGAGCTTTGAGGTGCAAAATTGAGCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CCA 90 bp | ATGACTTCCTCCAAAAGCAATGCTTGCAATTGTTCAGATGCTAATTaGGTTGCTTCAGGTGTGAAATGTTCTCTTAGTAGAAATCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: MTSSKSNACNCSDAN*VASGVKCSLSRNPC Trigger: ACAAGGATTTCTACTAAGAGAACATTTCACACCTGAAGCAACCCAATTAGCATCTGAACAATTGCAAGCATTGCTTTTGGAGGAAGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS TCA 72 bp | GTCACGGCTAAGCTAATGAGTGGCCAACCCAGGTTCTaGGACTCAGGCAGTCTGGCTGGGAGCCCGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VTAKLMSGQPRF*DSGSLAGSPEP Trigger: GGGCTCCGGGCTCCCAGCCAGACTGCCTGAGTCTCAGAACCTGGGTTGGCCACTCATTAGCTTAGCCGTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484989.1 |
||
| CDS GCA 72 bp | GAGACTCACCCGATACCGCAGGCGAATAACCTGGTGTaGGGGCGGCTCCTCTTCACGAGCTGTAATGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ETHPIPQANNLV*GRLLFTSCNVR Trigger: CCTGACATTACAGCTCGTGAAGAGGAGCCGCCCGCACACCAGGTTATTCGCCTGCGGTATCGGGTGAGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484989.1 |
||
| CDS GCA 72 bp | GCTGTAGAACCGATACCGCAGGCGAATAACCTGGTGTaGGGGCGGCTCCTCTTCACGAGCTGTAATGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVEPIPQANNLV*GRLLFTSCNVR Trigger: CCTGACATTACAGCTCGTGAAGAGGAGCCGCCCGCACACCAGGTTATTCGCCTGCGGTATCGGTTCTACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CCA 72 bp | TCTCTGAGACTCACCCGATACCGCAGGCGAATAACCTaGTGTGCGGGCGGCTCCTCTTCACGAGCTGTAATG | + |
|
Preference number: 6 (lower is better) Translates to: SLRLTRYRRRIT*CAGGSSSRAVM Trigger: CATTACAGCTCGTGAAGAGGAGCCGCCCGCACACCAGGTTATTCGCCTGCGGTATCGGGTGAGTCTCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484989.1 |
||
| CDS CAA 90 bp | CCCTCTGCCTTGCTCACATCGTTGAGGCTAATCCTGTTCACTGGCTaGAGAAGCATGTGTTCCAGGTGGCCCAGGGCCTCTGCCCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: PSALLTSLRLILFTG*RSMCSRWPRASAQI Trigger: GATTTGGGCAGAGGCCCTGGGCCACCTGGAACACATGCTTCTCAAGCCAGTGAACAGGATTAGCCTCAACGATGTGAGCAAGGCAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CCA 72 bp | CACCCACCAAGGACAGCGCATGCAAGGCGATTTGCTTaGCTTGCAAGAATGTCACACCCTCCATGGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: HPPRTAHARRFA*LARMSHPPWNW Trigger: CCAGTTCCATGGAGGGTGTGACATTCTTGCAAGCCAAGCAAATCGCCTTGCATGCGCTGTCCTTGGTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381989.4 ENST00000484989.1 |
||
| CDS CCA 72 bp | CTCCTCTTCACGAGCTGTAATGTCAGGCTCTCATCCTaGAGGTGCCCATCAGACACCAGGAGGATGTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LLFTSCNVRLSS*RCPSDTRRMFR Trigger: ACGGAACATCCTCCTGGTGTCTGATGGGCACCTCCAGGATGAGAGCCTGACATTACAGCTCGTGAAGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381989.4 ENST00000484989.1 |
||
| CDS GCA 72 bp | ACCAAGGACAGCGCATGCAAGGCGATTTGCTTGGCTTaGAAGAATGTCACACCCTCCATGGAACTGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TKDSACKAICLA*KNVTPSMELEQ Trigger: CTGCTCCAGTTCCATGGAGGGTGTGACATTCTTGCAAGCCAAGCAAATCGCCTTGCATGCGCTGTCCTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381989.4 ENST00000484989.1 |
||
| CDS CAA 72 bp | TTGCTCACATCGTTGAGGCTAATCCTGTTCACTGGCTaGAGAAGCATGTGTTCCAGGTGGCCCAGGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLTSLRLILFTG*RSMCSRWPRAS Trigger: AGAGGCCCTGGGCCACCTGGAACACATGCTTCTCAAGCCAGTGAACAGGATTAGCCTCAACGATGTGAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 72 bp | TCACCCACCAAGGACAGCGCATGCAAGGCGATTTGCTaGGCTTGCAAGAATGTCACACCCTCCATGGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: SPTKDSACKAIC*ACKNVTPSMEL Trigger: CAGTTCCATGGAGGGTGTGACATTCTTGCAAGCCAAGCAAATCGCCTTGCATGCGCTGTCCTTGGTGGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381989.4 ENST00000484989.1 |
||
| CDS CAA 72 bp | CTTCTCACCCACCAAGGACAGCGCATGCAAGGCGATTaGCTTGGCTTGCAAGAATGTCACACCCTCCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLTHQGQRMQGD*LGLQECHTLHG Trigger: TCCATGGAGGGTGTGACATTCTTGCAAGCCAAGCAAATCGCCTTGCATGCGCTGTCCTTGGTGGGTGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381989.4 ENST00000484989.1 |
||
| CDS CAA 90 bp | CTTCTCACCCACCAAGGACAGCGCATGCAAGGCGATTTGCTTGGCTaGCAAGAATGTCACACCCTCCATGGAACTGGAGCAGTCAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: LLTHQGQRMQGDLLG*QECHTLHGTGAVKT Trigger: TGTCTTGACTGCTCCAGTTCCATGGAGGGTGTGACATTCTTGCAAGCCAAGCAAATCGCCTTGCATGCGCTGTCCTTGGTGGGTGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 90 bp | TTCTGCTTCTCACCCACCAAGGACAGCGCATGCAAGGCGATTTGCTaGGCTTGCAAGAATGTCACACCCTCCATGGAACTGGAGCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FCFSPTKDSACKAIC*ACKNVTPSMELEQS Trigger: TGACTGCTCCAGTTCCATGGAGGGTGTGACATTCTTGCAAGCCAAGCAAATCGCCTTGCATGCGCTGTCCTTGGTGGGTGAGAAGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381989.4 ENST00000484989.1 |
||
| CDS CAA 90 bp | TACTTTCTGCTTCTCACCCACCAAGGACAGCGCATGCAAGGCGATTaGCTTGGCTTGCAAGAATGTCACACCCTCCATGGAACTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YFLLLTHQGQRMQGD*LGLQECHTLHGTGA Trigger: TGCTCCAGTTCCATGGAGGGTGTGACATTCTTGCAAGCCAAGCAAATCGCCTTGCATGCGCTGTCCTTGGTGGGTGAGAAGCAGAAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381989.4 ENST00000484989.1 |
||
| CDS TCA 72 bp | CTGGCTAGGTCAGGGAGGTCGACATCGAGATCGGGTTaGAAGACAAGCATGCAAGCCTCGCTTTCTTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LARSGRSTSRSG*KTSMQASLSFS Trigger: AGAAAAAGAAAGCGAGGCTTGCATGCTTGTCTTTCAACCCGATCTCGATGTCGACCTCCCTGACCTAGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CCA 72 bp | ATCCTGTTCACTGGCTTGAGAAGCATGTGTTCCAGGTaGCCCAGGGCCTCTGCCCAAATCATCTCTACTAAA | + |
|
Preference number: 6 (lower is better) Translates to: ILFTGLRSMCSR*PRASAQIISTK Trigger: TTTAGTAGAGATGATTTGGGCAGAGGCCCTGGGCCACCTGGAACACATGCTTCTCAAGCCAGTGAACAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 72 bp | TGTATCCTGAAGGTTTTCATTCAAAGCCTTGTCCTGTaGCCAGGGTGCTACGGTGGCGGGCATGAAAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: CILKVFIQSLVL*PGCYGGGHEKD Trigger: GTCTTTTTCATGCCCGCCACCGTAGCACCCTGGCAACAGGACAAGGCTTTGAATGAAAACCTTCAGGATACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 90 bp | CTTCTCTACTGTATCCTGAAGGTTTTCATTCAAAGCCTTGTCCTGTaGCCAGGGTGCTACGGTGGCGGGCATGAAAAAGACACCAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLYCILKVFIQSLVL*PGCYGGGHEKDTNS Trigger: ACTGTTGGTGTCTTTTTCATGCCCGCCACCGTAGCACCCTGGCAACAGGACAAGGCTTTGAATGAAAACCTTCAGGATACAGTAGAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 90 bp | CTAACCCTGAGAAATTCTTCAGTATTCTGTTCAACATGCTCAATTTaGCACCTCAAAGCTCGGTATTTGGCCAGGGATGGTGGGTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LTLRNSSVFCSTCSI*HLKARYLARDGGLG Trigger: ACCCAACCCACCATCCCTGGCCAAATACCGAGCTTTGAGGTGCAAAATTGAGCATGTTGAACAGAATACTGAAGAATTTCTCAGGGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS TCA 72 bp | CTTCAGAACTGCTCGCCTTCTGATCAGGAGGTGGTGTaGTGTCCAGGGGCTTATAAGGATCATAATTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LQNCSPSDQEVV*CPGAYKDHNSL Trigger: TAAAGAATTATGATCCTTATAAGCCCCTGGACATCACACCACCTCCTGATCAGAAGGCGAGCAGTTCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CCA 72 bp | TTTCACTTCAGAACTGCTCGCCTTCTGATCAGGAGGTaGTGTGATGTCCAGGGGCTTATAAGGATCATAATT | + |
|
Preference number: 6 (lower is better) Translates to: FHFRTARLLIRR*CDVQGLIRIII Trigger: AATTATGATCCTTATAAGCCCCTGGACATCACACCACCTCCTGATCAGAAGGCGAGCAGTTCTGAAGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CCA 72 bp | TTTGCACCTCAAAGCTCGGTATTTGGCCAGGGATGGTaGGTTGGGTTTGGACAAATTAGTTTCACAGACATT | + |
|
Preference number: 6 (lower is better) Translates to: FAPQSSVFGQGW*VGFGQISFTDI Trigger: AATGTCTGTGAAACTAATTTGTCCAAACCCAACCCACCATCCCTGGCCAAATACCGAGCTTTGAGGTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CCA 72 bp | AATTTTGCACCTCAAAGCTCGGTATTTGGCCAGGGATaGTGGGTTGGGTTTGGACAAATTAGTTTCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: NFAPQSSVFGQG*WVGFGQISFTD Trigger: GTCTGTGAAACTAATTTGTCCAAACCCAACCCACCATCCCTGGCCAAATACCGAGCTTTGAGGTGCAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 72 bp | GGTGTGGCAGACATGATGAACTCTGCTGCCATGGTATaGCTTGTGATATGCTTAGGATACGAAAATAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GVADMMNSAAMV*LVICLGYENSS Trigger: GGAGCTATTTTCGTATCCTAAGCATATCACAAGCAATACCATGGCAGCAGAGTTCATCATGTCTGCCACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381989.4 ENST00000484989.1 |
||
| CDS CAA 90 bp | TTGCACCTCAAAGCTCGGTATTTGGCCAGGGATGGTGGGTTGGGTTaGGACAAATTAGTTTCACAGACATTAACCATGTCTCTTATTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LHLKARYLARDGGLG*DKLVSQTLTMSLIS Trigger: GCTAATAAGAGACATGGTTAATGTCTGTGAAACTAATTTGTCCAAACCCAACCCACCATCCCTGGCCAAATACCGAGCTTTGAGGTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 72 bp | AAAGCTCGGTATTTGGCCAGGGATGGTGGGTTGGGTTaGGACAAATTAGTTTCACAGACATTAACCATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: KARYLARDGGLG*DKLVSQTLTMS Trigger: AGACATGGTTAATGTCTGTGAAACTAATTTGTCCAAACCCAACCCACCATCCCTGGCCAAATACCGAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 72 bp | TATCACCTTGGTTTTACAGATGAGAGGTTAAGGAACTaGCTCAAGGTCACGGCTAAGCTAATGAGTGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: YHLGFTDERLRN*LKVTAKLMSGQ Trigger: TTGGCCACTCATTAGCTTAGCCGTGACCTTGAGCAAGTTCCTTAACCTCTCATCTGTAAAACCAAGGTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484989.1 |
||
| CDS CAA 90 bp | TCAATTTTGCACCTCAAAGCTCGGTATTTGGCCAGGGATGGTGGGTaGGGTTTGGACAAATTAGTTTCACAGACATTAACCATGTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SILHLKARYLARDGG*GLDKLVSQTLTMSL Trigger: AAGAGACATGGTTAATGTCTGTGAAACTAATTTGTCCAAACCCAACCCACCATCCCTGGCCAAATACCGAGCTTTGAGGTGCAAAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 90 bp | TATTTTCATTATCACCTTGGTTTTACAGATGAGAGGTTAAGGAACTaGCTCAAGGTCACGGCTAAGCTAATGAGTGGCCAACCCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: YFHYHLGFTDERLRN*LKVTAKLMSGQPRF Trigger: GAACCTGGGTTGGCCACTCATTAGCTTAGCCGTGACCTTGAGCAAGTTCCTTAACCTCTCATCTGTAAAACCAAGGTGATAATGAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484989.1 |
||
| CDS GCA 72 bp | GAAATTCTTCAGTATTCTGTTCAACATGCTCAATTTTaGACCTCAAAGCTCGGTATTTGGCCAGGGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EILQYSVQHAQF*TSKLGIWPGMV Trigger: CACCATCCCTGGCCAAATACCGAGCTTTGAGGTGCAAAATTGAGCATGTTGAACAGAATACTGAAGAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 72 bp | AGAAATTCTTCAGTATTCTGTTCAACATGCTCAATTTaGCACCTCAAAGCTCGGTATTTGGCCAGGGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: RNSSVFCSTCSI*HLKARYLARDG Trigger: ACCATCCCTGGCCAAATACCGAGCTTTGAGGTGCAAAATTGAGCATGTTGAACAGAATACTGAAGAATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 90 bp | TGTGCCTTTGTGAGGTATCAGTCTGTAAAACTCTGTCATCATCTTTaGCAATTGCTCTGCTGTTTCTCCATTTTTCAGTGCTGCCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: CAFVRYQSVKLCHHL*QLLCCFSIFQCCLY Trigger: GTAAAGGCAGCACTGAAAAATGGAGAAACAGCAGAGCAATTGCAAAAGATGATGACAGAGTTTTACAGACTGATACCTCACAAAGGCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 72 bp | GTGAGGTATCAGTCTGTAAAACTCTGTCATCATCTTTaGCAATTGCTCTGCTGTTTCTCCATTTTTCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VRYQSVKLCHHL*QLLCCFSIFQC Trigger: GCACTGAAAAATGGAGAAACAGCAGAGCAATTGCAAAAGATGATGACAGAGTTTTACAGACTGATACCTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 72 bp | ATTAAGTTTCACAATGAGACTAAAGTGAATGTAATCTaGGCAAGGCCACAACTGTCAGCAAGACAGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: IKFHNETKVNVI*ARPQLSARQLV Trigger: AACCAGCTGTCTTGCTGACAGTTGTGGCCTTGCCAAGATTACATTCACTTTAGTCTCATTGTGAAACTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480576.1 |
||
| CDS CCA 72 bp | TCCAAAAGCAATGCTTGCAATTGTTCAGATGCTAATTaGGTTGCTTCAGGTGTGAAATGTTCTCTTAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SKSNACNCSDAN*VASGVKCSLSR Trigger: TCTACTAAGAGAACATTTCACACCTGAAGCAACCCAATTAGCATCTGAACAATTGCAAGCATTGCTTTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||
| CDS CAA 72 bp | TATAAAATCTGGGTTTGCAATATGAACGTGGTTCTTTaGGATAGAATTCAGTTGGTACTGACTCAGAACATC | + |
|
Preference number: 6 (lower is better) Translates to: YKIWVCNMNVVL*DRIQLVLTQNI Trigger: GATGTTCTGAGTCAGTACCAACTGAATTCTATCCAAAAGAACCACGTTCATATTGCAAACCCAGATTTTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381989.4 |
||