RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PARP16 (Homo sapiens)

Ensembl gene IDs: ENSG00000138617

Ensembl transcript IDs: ENST00000261888.10, ENST00000444347.2, ENST00000558873.1, ENST00000559805.1, ENST00000560149.5, ENST00000649807.2

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAAGGGAGCAGAGAATACAGCAAGCAGGGCTCCGGCTCTCTGGGTaGCCAGAAGGCTTTTCCTACACATTAAAGCCCAGGCTGAGTCTC +
Preference number: 1 (lower is better)
Translates to: RREQRIQQAGLRLSG*PEGFSYTLKPRLSL
Trigger: GAGACTCAGCCTGGGCTTTAATGTGTAGGAAAAGCCTTCTGGCCACCCAGAGAGCCGGAGCCCTGCTTGCTGTATTCTCTGCTCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CCA 90 bp AGGAAGAAGGGAGCAGAGAATACAGCAAGCAGGGCTCCGGCTCTCTaGGTGGCCAGAAGGCTTTTCCTACACATTAAAGCCCAGGCTGAG +
Preference number: 1 (lower is better)
Translates to: RKKGAENTASRAPAL*VARRLFLHIKAQAE
Trigger: CTCAGCCTGGGCTTTAATGTGTAGGAAAAGCCTTCTGGCCACCCAGAGAGCCGGAGCCCTGCTTGCTGTATTCTCTGCTCCCTTCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CCA 90 bp GGGCTTCTGGCTGTAAAACCTACATGTGGCCTCACTCTCTCTATGTaGCCTGGGTGTCCTCACAGCATGGCAGGTGGGTCCTCTCTACTT +
Preference number: 1 (lower is better)
Translates to: GLLAVKPTCGLTLSM*PGCPHSMAGGSSLL
Trigger: AAGTAGAGAGGACCCACCTGCCATGCTGTGAGGACACCCAGGCCACATAGAGAGAGTGAGGCCACATGTAGGTTTTACAGCCAGAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR CCA 90 bp AGTAACTGGGCTCAGCTAGGTAGCTCTTGCTCTGGGTCTCTCATGTaGTTGCAGTCATCCACAAGTGCTGGAATCATCTCAGCCTCTTCA +
Preference number: 1 (lower is better)
Translates to: SNWAQLGSSCSGSLM*LQSSTSAGIISASS
Trigger: TGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGACTGCAACCACATGAGAGACCCAGAGCAAGAGCTACCTAGCTGAGCCCAGTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR CCA 90 bp CTCTTGCTCTGGGTCTCTCATGTGGTTGCAGTCATCCACAAGTGCTaGAATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCT +
Preference number: 1 (lower is better)
Translates to: LLLWVSHVVAVIHKC*NHLSLFSTCLAVDA
Trigger: AGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGACTGCAACCACATGAGAGACCCAGAGCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR CCA 90 bp TCATCCACAAGTGCTGGAATCATCTCAGCCTCTTCAGTACATGTTTaGCAGTTGATGCTGGTTGCAGGTTTGGTTTTCAGTGGGGCTTCT +
Preference number: 1 (lower is better)
Translates to: SSTSAGIISASSVHV*QLMLVAGLVFSGAS
Trigger: AGAAGCCCCACTGAAAACCAAACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR TCA 90 bp CACTTTGTTTTTAAATGCAGCAGGGCTTTTTCCTTTGGCCCTGGCTaGAAAGCCAACTCCCTAGGACAGTTTAAGAAGGAGCAGATGGAA +
Preference number: 1 (lower is better)
Translates to: HFVFKCSRAFSFGPG*KANSLGQFKKEQME
Trigger: TTCCATCTGCTCCTTCTTAAACTGTCCTAGGGAGTTGGCTTTTCAGCCAGGGCCAAAGGAAAAAGCCCTGCTGCATTTAAAAACAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp TCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACACTGGGGCAGGCCTCTGTAAAGCATGGCACTCGTaGTTGCAGGCCACAGTCAAG +
Preference number: 2 (lower is better)
Translates to: SEGGSIHMDLWHTGAGLCKAWHS*LQATVK
Trigger: CTTGACTGTGGCCTGCAACCACGAGTGCCATGCTTT...ACAGAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTCCTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATACCCCTAGGCTCAACCTaGCTGGACATGAGGCATAGG +
Preference number: 2 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPIPLGST*LDMRHR
Trigger: CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGG...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR TCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCCAACCTGGCTGGACATaGGGCATAGGAGGTACAGAA +
Preference number: 2 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGQPGWT*GIGGTE
Trigger: TTCTGTACCTCCTATGCCTCATGTCCAGCCAGGTTG...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR TCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACTAGTAGTCCCCGTTaGCTGGAGTATGGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGTSSPR*LEYGWE
Trigger: TTCCCAGCCATACTCCAGTCAACGGGGACTACTAGT...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp GTCACTCCCAAATCGTACCGGGCCCTATTATGGCTAAAACCCAGCAGGAAGAAGCCCCTAGGCTCAACCTaGCTGGACATGAGGCATAGG +
Preference number: 2 (lower is better)
Translates to: VTPKSYRALLWLKPSRKKPLGST*LDMRHR
Trigger: CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGG...CTTCTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTACGATTTGGGAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR TCA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAACTAGTAGTCCCCGTTaGCTGGAGTATGGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPITSSPR*LEYGWE
Trigger: TTCCCAGCCATACTCCAGTCAACGGGGACTACTAGT...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGTAGTCCCCGTTGACTaGAGTATGGCTGGGAACATC +
Preference number: 2 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPIVVPVD*SMAGNI
Trigger: GATGTTCCCAGCCATACTCCAGTCAACGGGGACTAC...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTAAAGCATGGCACTCGTaGTTGCAGGCCACAGTCAAG +
Preference number: 2 (lower is better)
Translates to: HIKAQAESQRPVTPLKEAKAWHS*LQATVK
Trigger: CTTGACTGTGGCCTGCAACCACGAGTGCCATGCTTT...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp TTCAGTGGGGCTTCTGGCTGTAAAACCTACATGTGGCCTCACTCTCTCTATGTGATGAGGCCCTTGTCCTaGGCCCACCCTTTAGATGGC +
Preference number: 2 (lower is better)
Translates to: FSGASGCKTYMWPHSLYVMRPLS*AHPLDG
Trigger: GCCATCTAAAGGGTGGGCCCAGGACAAGGGCCTCAT...CACATAGAGAGAGTGAGGCCACATGTAGGTTTTACAGCCAGAAGCCCCACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR-3UTR TCA 90 bp AAGGGCCAACCTCTGCCAGGAGAGATTGTAAACACACCACTGACAGCTTGGACACAACCTGGCTGGACATaGGGCATAGGAGGTACAGAA +
Preference number: 2 (lower is better)
Translates to: KGQPLPGEIVNTPLTAWTQPGWT*GIGGTE
Trigger: TTCTGTACCTCCTATGCCTCATGTCCAGCCAGGTTG...TGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCTCCTGGCAGAGGTTGGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp TCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACACTGGGGCAGGCCTCTGTCATGACTGTTCCTCTTaGGTGTCTCAAGTCAAAACA +
Preference number: 2 (lower is better)
Translates to: SEGGSIHMDLWHTGAGLCHDCSS*VSQVKT
Trigger: TGTTTTGACTTGAGACACCCAAGAGGAACAGTCATG...ACAGAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTCCTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp GTCACTCCCAAATCGTACCGGGCCCTATTATGGCTAAAACCCAGCAGGAAGAAGAAAGCATGGCACTCGTaGTTGCAGGCCACAGTCAAG +
Preference number: 2 (lower is better)
Translates to: VTPKSYRALLWLKPSRKKKAWHS*LQATVK
Trigger: CTTGACTGTGGCCTGCAACCACGAGTGCCATGCTTT...CTTCTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTACGATTTGGGAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CAA 90 bp AACTGGGCTCAGCTAGGTAGCTCTTGCTCTGGGTCTCTCATGTGGTaGCAGTCATCCACAAGTGCTGGAATCATCTCAGCCTCTTCAGTA +
Preference number: 2 (lower is better)
Translates to: NWAQLGSSCSGSLMW*QSSTSAGIISASSV
Trigger: TACTGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGACTGCAACCACATGAGAGACCCAGAGCAAGAGCTACCTAGCTGAGCCCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR-3UTR CCA 90 bp GGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTTCGTAGTCCCCGTTGACTaGAGTATGGCTGGGAACATC +
Preference number: 2 (lower is better)
Translates to: GSFVRMRTGGEPIAQIPFVVPVD*SMAGNI
Trigger: GATGTTCCCAGCCATACTCCAGTCAACGGGGACTAC...GAAAGGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp TCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCGTAGTCCCCGTTGACTaGAGTATGGCTGGGAACATC +
Preference number: 2 (lower is better)
Translates to: SRQLCENENRRRAYSSNPVVPVD*SMAGNI
Trigger: GATGTTCCCAGCCATACTCCAGTCAACGGGGACTAC...GGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp GGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTTCCCAGAAAAGAGGCTGTaGACACTGGCCAAACAGTGC +
Preference number: 2 (lower is better)
Translates to: GSFVRMRTGGEPIAQIPFPEKRL*TLAKQC
Trigger: GCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGG...GAAAGGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp TCATCCACAAGTGCTGGAATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGGGTGTCCTCACAGCATaGCAGGTGGGTCCTCTCTAC +
Preference number: 2 (lower is better)
Translates to: SSTSAGIISASSVHVWQLGVLTA*QVGPLY
Trigger: GTAGAGAGGACCCACCTGCCATGCTGTGAGGACACC...CAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR-3UTR CCA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATATTAAGAAGGAGCAGATaGAAGGACTCCCCTAAAACC +
Preference number: 2 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPILRRSR*KDSPKT
Trigger: GGTTTTAGGGGAGTCCTTCCATCTGCTCCTTCTTAA...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTTTTTCCTTTGGCCCTaGCTGAAAAGCCAACTCCCT +
Preference number: 2 (lower is better)
Translates to: FSAFQKALEKGPTSARRDFFLWP*LKSQLP
Trigger: AGGGAGTTGGCTTTTCAGCCAGGGCCAAAGGAAAAA...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CAA 90 bp ACAAGTGCTGGAATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTaGATGCTGGTTGCAGGTTTGGTTTTCAGTGGGGCTTCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: TSAGIISASSVHVWQ*MLVAGLVFSGASGC
Trigger: ACAGCCAGAAGCCCCACTGAAAACCAAACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCCAGCACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR-3UTR CCA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTTAAGAAGGAGCAGATaGAAGGACTCCCCTAAAACC +
Preference number: 2 (lower is better)
Translates to: FSAFQKALEKGPTSARRDLRRSR*KDSPKT
Trigger: GGTTTTAGGGGAGTCCTTCCATCTGCTCCTTCTTAA...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCATGACTGTTCCTCTTaGGTGTCTCAAGTCAAAACA +
Preference number: 2 (lower is better)
Translates to: HIKAQAESQRPVTPLKEAHDCSS*VSQVKT
Trigger: TGTTTTGACTTGAGACACCCAAGAGGAACAGTCATG...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp ATGTGGTTGCAGTCATCCACAAGTGCTGGAATCATCTCAGCCTCTTCAGTACATTCACAGCATGGCAGGTaGGTCCTCTCTACTTTCCAC +
Preference number: 2 (lower is better)
Translates to: MWLQSSTSAGIISASSVHSQHGR*VLSTFH
Trigger: GTGGAAAGTAGAGAGGACCCACCTGCCATGCTGTGA...ATGTACTGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGACTGCAACCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR-3UTR CCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCCATCATCAAAGGCAATaGATACATTTAGGCCATATG +
Preference number: 2 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGHHQRQ*IHLGHM
Trigger: CATATGGCCTAAATGTATCCATTGCCTTTGATGATG...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CAA 90 bp TCTGCCAGGAGAGATTGTAAACACACCACTGACAGCTTGGACACTTaGTTTTTAAATGCAGCAGGGCTTTTTCCTTTGGCCCTGGCTGAA +
Preference number: 2 (lower is better)
Translates to: SARRDCKHTTDSLDT*FLNAAGLFPLALAE
Trigger: TTCAGCCAGGGCCAAAGGAAAAAGCCCTGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCTCCTGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR TCA 90 bp CTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTCAACCTGGCTGGACATaGGGCATAGGAGGTACAGAA +
Preference number: 2 (lower is better)
Translates to: LAKQCTRFRNFPFYSAKTQPGWT*GIGGTE
Trigger: TTCTGTACCTCCTATGCCTCATGTCCAGCCAGGTTG...AGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp GTCACTCCCAAATCGTACCGGGCCCTATTATGGCTAAAACCCAGCAGGAAGAAGCATCATCAAAGGCAATaGATACATTTAGGCCATATG +
Preference number: 2 (lower is better)
Translates to: VTPKSYRALLWLKPSRKKHHQRQ*IHLGHM
Trigger: CATATGGCCTAAATGTATCCATTGCCTTTGATGATG...CTTCTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTACGATTTGGGAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGCCCCTAGGCTCAACCTaGCTGGACATGAGGCATAGG +
Preference number: 2 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLPLGST*LDMRHR
Trigger: CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGG...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp CTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTTTTTTCCTTTGGCCCTaGCTGAAAAGCCAACTCCCT +
Preference number: 2 (lower is better)
Translates to: LAKQCTRFRNFPFYSAKTFFLWP*LKSQLP
Trigger: AGGGAGTTGGCTTTTCAGCCAGGGCCAAAGGAAAAA...AGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CCA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCATTAAGAAGGAGCAGATaGAAGGACTCCCCTAAAACC +
Preference number: 2 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAALRRSR*KDSPKT
Trigger: GGTTTTAGGGGAGTCCTTCCATCTGCTCCTTCTTAA...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CCA 72 bp GTCCTGTGGTCCCCCAACTGGCCCCTAGGCTCAACCTaGCTGGACATGAGGCATAGGAGGTACAGAACAAGT +
Preference number: 3 (lower is better)
Translates to: VLWSPNWPLGST*LDMRHRRYRTS
Trigger: ACTTGTTCTGTACCTCCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGGCCAGTTGGGGGACCACAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CAA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCGCAGGGCTTTTTCCTTaGGCCCTGGCTGAAAAGCCA +
Preference number: 3 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGAGLFP*ALAEKP
Trigger: TGGCTTTTCAGCCAGGGCCAAAGGAAAAAGCCCTGC...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CCA 72 bp GGAGCAGAGAATACAGCAAGCAGGGCTCCGGCTCTCTaGGTGGCCAGAAGGCTTTTCCTACACATTAAAGCC +
Preference number: 3 (lower is better)
Translates to: GAENTASRAPAL*VARRLFLHIKA
Trigger: GGCTTTAATGTGTAGGAAAAGCCTTCTGGCCACCCAGAGAGCCGGAGCCCTGCTTGCTGTATTCTCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CAA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATGCAGGGCTTTTTCCTTaGGCCCTGGCTGAAAAGCCA +
Preference number: 3 (lower is better)
Translates to: FSAFQKALEKGPTSARRDAGLFP*ALAEKP
Trigger: TGGCTTTTCAGCCAGGGCCAAAGGAAAAAGCCCTGC...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CCA 72 bp TACTTTCCACAGTTCCTTTCCATGAGGCCCTTGTCCTaGGCCCACCCTTTAGATGGCCACACTCTGGCTTTA +
Preference number: 3 (lower is better)
Translates to: YFPQFLSMRPLS*AHPLDGHTLAL
Trigger: TAAAGCCAGAGTGTGGCCATCTAAAGGGTGGGCCCAGGACAAGGGCCTCATGGAAAGGAACTGTGGAAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR-3UTR CAA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCGACAGCTTGGACACTTaGTTTTTAAATGCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGDSLDT*FLNAAG
Trigger: CCCTGCTGCATTTAAAAACAAAGTGTCCAAGCTGTC...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CCA 72 bp GCTCAGCTAGGTAGCTCTTGCTCTGGGTCTCTCATGTaGTTGCAGTCATCCACAAGTGCTGGAATCATCTCA +
Preference number: 3 (lower is better)
Translates to: AQLGSSCSGSLM*LQSSTSAGIIS
Trigger: TGAGATGATTCCAGCACTTGTGGATGACTGCAACCACATGAGAGACCCAGAGCAAGAGCTACCTAGCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR GCA 72 bp CTCTGGGTCTCTCATGTGGTTGCAGTCATCCACAAGTaGTGGAATCATCTCAGCCTCTTCAGTACATGTTTG +
Preference number: 3 (lower is better)
Translates to: LWVSHVVAVIHK*WNHLSLFSTCL
Trigger: CAAACATGTACTGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGACTGCAACCACATGAGAGACCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR CCA 72 bp TGGGTCTCTCATGTGGTTGCAGTCATCCACAAGTGCTaGAATCATCTCAGCCTCTTCAGTACATGTTTGGCA +
Preference number: 3 (lower is better)
Translates to: WVSHVVAVIHKC*NHLSLFSTCLA
Trigger: TGCCAAACATGTACTGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGACTGCAACCACATGAGAGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR-3UTR CAA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATACACACCACTGACAGCTaGGACACTTTGTTTTTAAAT +
Preference number: 3 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPIHTTDS*DTLFLN
Trigger: ATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTG...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR TCA 72 bp GAATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTaGTGCTGGTTGCAGGTTTGGTTTTCAGTGGGGCTT +
Preference number: 3 (lower is better)
Translates to: ESSQPLQYMFGS*CWLQVWFSVGL
Trigger: AAGCCCCACTGAAAACCAAACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559805.1
3UTR-3UTR CAA 90 bp GCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTGTAAACACACCACTGACAGCTaGGACACTTTGTTTTTAAAT +
Preference number: 3 (lower is better)
Translates to: AFQKALEKGPTSARRDCKHTTDS*DTLFLN
Trigger: ATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTG...TTTACAATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CAA 90 bp TCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCAGCAGTTTTCTCATCTaGAGTTGCTCATTAAGTCTG +
Preference number: 3 (lower is better)
Translates to: SRQLCENENRRRAYSSNPSSFLI*SCSLSL
Trigger: CAGACTTAATGAGCAACTCAAGATGAGAAAACTGCT...GGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CCA 72 bp ATCCCTTTCTCTAAAACACAGCCAGAAAAGAGGCTGTaGACACTGGCCAAACAGTGCACTAGGTTTAGAAAT +
Preference number: 3 (lower is better)
Translates to: IPFSKTQPEKRL*TLAKQCTRFRN
Trigger: ATTTCTAAACCTAGTGCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGGCTGTGTTTTAGAGAAAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CAA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGGCAGGGCTTTTTCCTTaGGCCCTGGCTGAAAAGCCA +
Preference number: 3 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLAGLFP*ALAEKP
Trigger: TGGCTTTTCAGCCAGGGCCAAAGGAAAAAGCCCTGC...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CAA 90 bp CTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTGACAGCTTGGACACTTaGTTTTTAAATGCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: LAKQCTRFRNFPFYSAKTDSLDT*FLNAAG
Trigger: CCCTGCTGCATTTAAAAACAAAGTGTCCAAGCTGTC...AGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CAA 90 bp CTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAGCAGTTTTCTCATCTaGAGTTGCTCATTAAGTCTG +
Preference number: 3 (lower is better)
Translates to: LAKQCTRFRNFPFYSAKTSSFLI*SCSLSL
Trigger: CAGACTTAATGAGCAACTCAAGATGAGAAAACTGCT...AGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR-3UTR CAA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGCACACCACTGACAGCTaGGACACTTTGTTTTTAAAT +
Preference number: 3 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLHTTDS*DTLFLN
Trigger: ATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTG...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp CTGTGGTCCCCCAACTGGCCCCTAGGCTCAACCTGGCTGGACATGAGGCATAGGCCGGGTTCCCAAGCCTaGGGTGGAGCTAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LWSPNWPLGSTWLDMRHRPGSQA*GGARQG
Trigger: CCCCTGCCTAGCTCCACCCCAGGCTTGGGAACCCGG...CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGGCCAGTTGGGGGACCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACACTGGGGCAGGCCTCTGTGTTCAGCGCGGGGGCTaGGCCCGCGGACAATGGGCC +
Preference number: 4 (lower is better)
Translates to: SEGGSIHMDLWHTGAGLCVQRGG*ARGQWA
Trigger: GGCCCATTGTCCGCGGGCCCAGCCCCCGCGCTGAAC...ACAGAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTCCTTCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTGGCGGCCGCCCAGCCTaGGGGCTGCATCCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: HIKAQAESQRPVTPLKEAGGRPA*GLHPRS
Trigger: TGACCTGGGATGCAGCCCTCAGGCTGGGCGGCCGCC...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp CGTGGTTGCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGACCGACAAGTGTCCTCTaGCGGGGTCTGGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RGCRPQSRQLCENENRRRPTSVL*RGLGRG
Trigger: GCCGCGGCCCAGACCCCGGCAGAGGACACTTGTCGG...TCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGCAACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCTGGGCCCGCGGACAATaGGCCGTCAGGGGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGWARGQ*AVRGRV
Trigger: AACCCGGCCCCTGACGGCCCATTGTCCGCGGGCCCA...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATACCGAGGCGAAGAGGCTaGACCGGAGGTCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPIPRRRG*TGGRRP
Trigger: TGGCCGCCGACCTCCGGTGCAGCCTCTTCGCCTCGG...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTAGAGAGACCGAGGCCTaGACCGCGGGTCGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: HIKAQAESQRPVTPLKEARETEA*TAGRRG
Trigger: TCCCCGCCGACCCGCGGTCCAGGCCTCGGTCTCTCT...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp GTCACTCCCAAATCGTACCGGGCCCTATTATGGCTAAAACCCAGCAGGAAGAAGGTTCAGCGCGGGGGCTaGGCCCGCGGACAATGGGCC +
Preference number: 4 (lower is better)
Translates to: VTPKSYRALLWLKPSRKKVQRGG*ARGQWA
Trigger: GGCCCATTGTCCGCGGGCCCAGCCCCCGCGCTGAAC...CTTCTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTACGATTTGGGAGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp TCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCGGCGGCCGCCCAGCCTaGGGGCTGCATCCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SRQLCENENRRRAYSSNPGGRPA*GLHPRS
Trigger: TGACCTGGGATGCAGCCCTCAGGCTGGGCGGCCGCC...GGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp GTCACTCCCAAATCGTACCGGGCCCTATTATGGCTAAAACCCAGCAGGAAGAAGCCGACAAGTGTCCTCTaGCGGGGTCTGGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: VTPKSYRALLWLKPSRKKPTSVL*RGLGRG
Trigger: GCCGCGGCCCAGACCCCGGCAGAGGACACTTGTCGG...CTTCTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTACGATTTGGGAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp AAGGGCCAACCTCTGCCAGGAGAGATTGTAAACACACCACTGACAGCTTGGACACCGACAAGTGTCCTCTaGCGGGGTCTGGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: KGQPLPGEIVNTPLTAWTPTSVL*RGLGRG
Trigger: GCCGCGGCCCAGACCCCGGCAGAGGACACTTGTCGG...TGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCTCCTGGCAGAGGTTGGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp AAGGGCCAACCTCTGCCAGGAGAGATTGTAAACACACCACTGACAGCTTGGACATGGGCCCGCGGACAATaGGCCGTCAGGGGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: KGQPLPGEIVNTPLTAWTWARGQ*AVRGRV
Trigger: AACCCGGCCCCTGACGGCCCATTGTCCGCGGGCCCA...TGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCTCCTGGCAGAGGTTGGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACACTGGGGCAGGCCTCTGTTCCCAGGCCCGTTTGTaGTTGTCTCCGGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: SEGGSIHMDLWHTGAGLCSQARL*LSPEDW
Trigger: CCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGA...ACAGAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTCCTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp CTGTGGTCCCCCAACTGGCCCCTAGGCTCAACCTGGCTGGACATGAGGCATAGGGAAAACCAGGAGAGCTaGCTCGAAGCCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: LWSPNWPLGSTWLDMRHRENQES*LEALLG
Trigger: ACCCAAGAGGGCTTCGAGCCAGCTCTCCTGGTTTTC...CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGGCCAGTTGGGGGACCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp AAGGGCCAACCTCTGCCAGGAGAGATTGTAAACACACCACTGACAGCTTGGACAACCGCGGGAACGTGCTaGCACGTGTCCTCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: KGQPLPGEIVNTPLTAWTTAGTC*HVSSAE
Trigger: CTCCGCGGAGGACACGTGTCAGCACGTTCCCGCGGT...TGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCTCCTGGCAGAGGTTGGCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp GGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTTCCCGAGGCGAAGAGGCTaGACCGGAGGTCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GSFVRMRTGGEPIAQIPFPRRRG*TGGRRP
Trigger: TGGCCGCCGACCTCCGGTGCAGCCTCTTCGCCTCGG...GAAAGGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp AAGGGCCAACCTCTGCCAGGAGAGATTGTAAACACACCACTGACAGCTTGGACACCGAGGAGGCTGTGCTaGCACCCATGGCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: KGQPLPGEIVNTPLTAWTPRRLC*HPWPWG
Trigger: CCCCCATGGCCATGGGTGGCAGCACAGCCTCCTCGG...TGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCTCCTGGCAGAGGTTGGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCAGAGAGACCGAGGCCTaGACCGCGGGTCGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SRQLCENENRRRAYSSNPRETEA*TAGRRG
Trigger: TCCCCGCCGACCCGCGGTCCAGGCCTCGGTCTCTCT...GGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACACTGGGGCAGGCCTCTGTCCCCTAGGCTCAACCTaGCTGGACATGAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: SEGGSIHMDLWHTGAGLCPLGST*LDMRHR
Trigger: CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGG...ACAGAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTCCTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp CTGTGGTCCCCCAACTGGCCCCTAGGCTCAACCTGGCTGGACATGAGGCATAGGCCAGAAAAGAGGCTGTaGACACTGGCCAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: LWSPNWPLGSTWLDMRHRPEKRL*TLAKQC
Trigger: GCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGG...CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGGCCAGTTGGGGGACCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACACTGGGGCAGGCCTCTGTGAGGCTCCATCCACATaGATCTGTGGCACACTGGGG +
Preference number: 4 (lower is better)
Translates to: SEGGSIHMDLWHTGAGLCEAPST*ICGTLG
Trigger: CCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTC...ACAGAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTCCTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACACTGGGGCAGGCCTCTGTCTCCGGCTCTCTGGGTaGCCAGAAGGCTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: SEGGSIHMDLWHTGAGLCLRLSG*PEGFSY
Trigger: GTAGGAAAAGCCTTCTGGCCACCCAGAGAGCCGGAG...ACAGAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTCCTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp CCTCTTGGGTGTCTCAAGTCAAAACAAGGCAACCGCCTAGTGATTTATAGTTCCGGGCAAGGGCGAGCGTaGGTTCAGCGCGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLGCLKSKQGNRLVIYSSGQGRA*VQRGGW
Trigger: CCAGCCCCCGCGCTGAACGCACGCTCGCCCTTGCCC...GGAACTATAAATCACTAGGCGGTTGCCTTGTTTTGACTTGAGACACCCAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp GAAGGAGCAGATGGAAGGACTCCCCTAAAACCTAAGAGTGAGGGACTAGTAGTCCCGAGGAGGCTGTGCTaGCACCCATGGCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: EGADGRTPLKPKSEGLVVPRRLC*HPWPWG
Trigger: CCCCCATGGCCATGGGTGGCAGCACAGCCTCCTCGG...GACTACTAGTCCCTCACTCTTAGGTTTTAGGGGAGTCCTTCCATCTGCTCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCTGCCACCCATGGCCATaGGGGCTGTATATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGCHPWP*GLYMRA
Trigger: GGCCCTCATATACAGCCCCCATGGCCATGGGTGGCA...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCAGGGCTCCGGCTCTCTaGGTGGCCAGAAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGRAPAL*VARRLF
Trigger: GAAAAGCCTTCTGGCCACCCAGAGAGCCGGAGCCCT...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTCCATGAGGCCCTTGTCCTGGGCCCACCCTTTAGATGGCCACACTCTGGCTTTATGAGGCCCTTGTCCTaGGCCCACCCTTTAGATGGC +
Preference number: 4 (lower is better)
Translates to: FHEALVLGPPFRWPHSGFMRPLS*AHPLDG
Trigger: GCCATCTAAAGGGTGGGCCCAGGACAAGGGCCTCAT...AAAGCCAGAGTGTGGCCATCTAAAGGGTGGGCCCAGGACAAGGGCCTCATGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR TCA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTGGCTCAAGTCACTGGTaGGGTAGGTCCCCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: HIKAQAESQRPVTPLKEAGSSHW*GRSPLR
Trigger: TCGGAGAGGGGACCTACCTCACCAGTGACTTGAGCC...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp ACCTGGCTGGACATGAGGCATAGGAGGTACAGAACAAGTTACCATAAGGCACATCCGAGGAGGCTGTGCTaGCACCCATGGCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: TWLDMRHRRYRTSYHKAHPRRLC*HPWPWG
Trigger: CCCCCATGGCCATGGGTGGCAGCACAGCCTCCTCGG...ATGTGCCTTATGGTAACTTGTTCTGTACCTCCTATGCCTCATGTCCAGCCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp CCTCTTGGGTGTCTCAAGTCAAAACAAGGCAACCGCCTAGTGATTTATAGTTCCAGAGAGACCGAGGCCTaGACCGCGGGTCGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PLGCLKSKQGNRLVIYSSRETEA*TAGRRG
Trigger: TCCCCGCCGACCCGCGGTCCAGGCCTCGGTCTCTCT...GGAACTATAAATCACTAGGCGGTTGCCTTGTTTTGACTTGAGACACCCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTTCCCAGGCCCGTTTGTaGTTGTCTCCGGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: HIKAQAESQRPVTPLKEASQARL*LSPEDW
Trigger: CCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGA...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACACTGGGGCAGGCCTCTGTCACTTGACGTCCGGATaGTCAATGACCTCACACACG +
Preference number: 4 (lower is better)
Translates to: SEGGSIHMDLWHTGAGLCHLTSG*SMTSHT
Trigger: CGTGTGTGAGGTCATTGACCATCCGGACGTCAAGTG...ACAGAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTCCTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCCCCCTAGGCTCAACCTaGCTGGACATGAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGPLGST*LDMRHR
Trigger: CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGG...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp CCTCTTGGGTGTCTCAAGTCAAAACAAGGCAACCGCCTAGTGATTTATAGTTCCACCGCGGGAACGTGCTaGCACGTGTCCTCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: PLGCLKSKQGNRLVIYSSTAGTC*HVSSAE
Trigger: CTCCGCGGAGGACACGTGTCAGCACGTTCCCGCGGT...GGAACTATAAATCACTAGGCGGTTGCCTTGTTTTGACTTGAGACACCCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp GTCACTCCCAAATCGTACCGGGCCCTATTATGGCTAAAACCCAGCAGGAAGAAGGGCTCAAGTCACTGGTaGGGTAGGTCCCCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: VTPKSYRALLWLKPSRKKGSSHW*GRSPLR
Trigger: TCGGAGAGGGGACCTACCTCACCAGTGACTTGAGCC...CTTCTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTACGATTTGGGAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATCGTCCGGATGGTCAATaGCCTCACACACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: FSAFQKALEKGPTSARRDRPDGQ*PHTRPH
Trigger: GTGTGGCCGTGTGTGAGGTCATTGACCATCCGGACG...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCTCCTTTGGCCCTGGCTaGAAAGCCAACTCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGSFGPG*KANSLG
Trigger: TCCTAGGGAGTTGGCTTTTCAGCCAGGGCCAAAGGA...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp CTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTGGGCAAGGGCGAGCGTaGGTTCAGCGCGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LAKQCTRFRNFPFYSAKTGQGRA*VQRGGW
Trigger: CCAGCCCCCGCGCTGAACGCACGCTCGCCCTTGCCC...AGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp ACCTGGCTGGACATGAGGCATAGGAGGTACAGAACAAGTTACCATAAGGCACATCAGGTCACTGCGCGTTaGCGGGGTAGACGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: TWLDMRHRRYRTSYHKAHQVTAR*RGRRAG
Trigger: ACCAGCGCGTCTACCCCGGCAACGCGCAGTGACCTG...ATGTGCCTTATGGTAACTTGTTCTGTACCTCCTATGCCTCATGTCCAGCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACACTGGGGCAGGCCTCTGTTCCTTCTTCTTGGTTTaGCACTTGACGTCCGGATGG +
Preference number: 4 (lower is better)
Translates to: SEGGSIHMDLWHTGAGLCSFFLV*HLTSGW
Trigger: CCATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGA...ACAGAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTCCTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGAGGCTCCATCCACATaGATCTGTGGCACACTGGGG +
Preference number: 4 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPIEAPST*ICGTLG
Trigger: CCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTC...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp GAAGGAGCAGATGGAAGGACTCCCCTAAAACCTAAGAGTGAGGGACTAGTAGTCCGTCCGGATGGTCAATaGCCTCACACACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: EGADGRTPLKPKSEGLVVRPDGQ*PHTRPH
Trigger: GTGTGGCCGTGTGTGAGGTCATTGACCATCCGGACG...GACTACTAGTCCCTCACTCTTAGGTTTTAGGGGAGTCCTTCCATCTGCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp CGTGGTTGCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCAGCTGGTTATTGGTaGCCACGAAGTACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RGCRPQSRQLCENENRRRAAGYW*PRSTWE
Trigger: CTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGC...TCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGCAACCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp AAGGGCCAACCTCTGCCAGGAGAGATTGTAAACACACCACTGACAGCTTGGACAACAGGGGTGAGAACGTaGCGACAAGTGTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KGQPLPGEIVNTPLTAWTTGVRT*RQVSSA
Trigger: GGCAGAGGACACTTGTCGGCACGTTCTCACCCCTGT...TGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCTCCTGGCAGAGGTTGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATCATGGCACTCGTGGTTaGAGGCCACAGTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FSAFQKALEKGPTSARRDHGTRG*RPQSRQ
Trigger: CTGCCTTGACTGTGGCCTGCAACCACGAGTGCCATG...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp TCCATGAGGCCCTTGTCCTGGGCCCACCCTTTAGATGGCCACACTCTGGCTTTATCTTCAGATTCCCAGTaGTATGAGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SMRPLSWAHPLDGHTLALSSDSQ*YEQQQQ
Trigger: CTGCTGCTGCTGCTCATAGCACTGGGAATCTGAAGA...TAAAGCCAGAGTGTGGCCATCTAAAGGGTGGGCCCAGGACAAGGGCCTCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCCACTTGACGTCCGGATaGTCAATGACCTCACACACG +
Preference number: 4 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGHLTSG*SMTSHT
Trigger: CGTGTGTGAGGTCATTGACCATCCGGACGTCAAGTG...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTCCATGAGGCCCTTGTCCTGGGCCCACCCTTTAGATGGCCACACTCTGGCTTTTTCACTCGCAGCAGCTaGTTATTGGTGACCACGAAG +
Preference number: 4 (lower is better)
Translates to: FHEALVLGPPFRWPHSGFFTRSS*LLVTTK
Trigger: CTTCGTGGTCACCAATAACCAGCTGCTGCGAGTGAA...AAAGCCAGAGTGTGGCCATCTAAAGGGTGGGCCCAGGACAAGGGCCTCATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CCA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGAAGACCTGAAAGCATaGCACTCGTGGTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPIEDLKA*HSWLQA
Trigger: GGCCTGCAACCACGAGTGCCATGCTTTCAGGTCTTC...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp AAGGGCCAACCTCTGCCAGGAGAGATTGTAAACACACCACTGACAGCTTGGACAATCCACATGGATCTGTaGCACACTGGGGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KGQPLPGEIVNTPLTAWTIHMDL*HTGAGL
Trigger: GAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGAT...TGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCTCCTGGCAGAGGTTGGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCAGGGCTCCGGCTCTCTaGGTGGCCAGAAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SRQLCENENRRRAYSSNPRAPAL*VARRLF
Trigger: GAAAAGCCTTCTGGCCACCCAGAGAGCCGGAGCCCT...GGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp GAAGGAGCAGATGGAAGGACTCCCCTAAAACCTAAGAGTGAGGGACTAGTAGTCAGGGCTCCGGCTCTCTaGGTGGCCAGAAGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: EGADGRTPLKPKSEGLVVRAPAL*VARRLF
Trigger: GAAAAGCCTTCTGGCCACCCAGAGAGCCGGAGCCCT...GACTACTAGTCCCTCACTCTTAGGTTTTAGGGGAGTCCTTCCATCTGCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTACTAGTAGTCCCCGTTaGCTGGAGTATGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: HIKAQAESQRPVTPLKEATSSPR*LEYGWE
Trigger: TTCCCAGCCATACTCCAGTCAACGGGGACTACTAGT...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTCCTTTGGCCCTGGCTaGAAAGCCAACTCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: FSAFQKALEKGPTSARRDSFGPG*KANSLG
Trigger: TCCTAGGGAGTTGGCTTTTCAGCCAGGGCCAAAGGA...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCAGGGCAAGGGCGAGCGTaGGTTCAGCGCGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAAGQGRA*VQRGGW
Trigger: CCAGCCCCCGCGCTGAACGCACGCTCGCCCTTGCCC...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp GGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTTCCATGGCACTCGTGGTTaGAGGCCACAGTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GSFVRMRTGGEPIAQIPFHGTRG*RPQSRQ
Trigger: CTGCCTTGACTGTGGCCTGCAACCACGAGTGCCATG...GAAAGGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTGCCTTCCCTGCACTGTaGATTGTCAGGACCTTTGAG +
Preference number: 4 (lower is better)
Translates to: HIKAQAESQRPVTPLKEAAFPAL*IVRTFE
Trigger: CTCAAAGGTCCTGACAATCCACAGTGCAGGGAAGGC...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCTCCTTCTTCTTGGTTTaGCACTTGACGTCCGGATGG +
Preference number: 4 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGSFFLV*HLTSGW
Trigger: CCATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGA...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTCCATGAGGCCCTTGTCCTGGGCCCACCCTTTAGATGGCCACACTCTGGCTTTATGACGGTAAACCAATaGCTGGAAAACCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: FHEALVLGPPFRWPHSGFMTVNQ*LENQES
Trigger: GCTCTCCTGGTTTTCCAGCCATTGGTTTACCGTCAT...AAAGCCAGAGTGTGGCCATCTAAAGGGTGGGCCCAGGACAAGGGCCTCATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CCA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAAGAGGCTGTGGACACTaGCCAAACAGTGCACTAGGT +
Preference number: 4 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPIRGCGH*PNSALG
Trigger: ACCTAGTGCACTGTTTGGCCAGTGTCCACAGCCTCT...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCAGAAAAGAGGCTGTaGACACTGGCCAAACAGTGC +
Preference number: 4 (lower is better)
Translates to: HIKAQAESQRPVTPLKEAPEKRL*TLAKQC
Trigger: GCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGG...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp GGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTTCCTCCGGCTCTCTGGGTaGCCAGAAGGCTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: GSFVRMRTGGEPIAQIPFLRLSG*PEGFSY
Trigger: GTAGGAAAAGCCTTCTGGCCACCCAGAGAGCCGGAG...GAAAGGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCTACCGGGCCCTATTATaGCTAAAACCCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGYRALL*LKPSRK
Trigger: CTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTA...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATGAAAACCAGGAGAGCTaGCTCGAAGCCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: FSAFQKALEKGPTSARRDENQES*LEALLG
Trigger: ACCCAAGAGGGCTTCGAGCCAGCTCTCCTGGTTTTC...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444347.2
ENST00000649807.2
3UTR CAA 72 bp CAGCTAGGTAGCTCTTGCTCTGGGTCTCTCATGTGGTaGCAGTCATCCACAAGTGCTGGAATCATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QLGSSCSGSLMW*QSSTSAGIISA
Trigger: GGCTGAGATGATTCCAGCACTTGTGGATGACTGCAACCACATGAGAGACCCAGAGCAAGAGCTACCTAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR TCA 90 bp GTCACTCCCAAATCGTACCGGGCCCTATTATGGCTAAAACCCAGCAGGAAGAAGCTAGGGGAAGGGCTATaGCAATGGAATGACAACCGC +
Preference number: 4 (lower is better)
Translates to: VTPKSYRALLWLKPSRKKLGEGL*QWNDNR
Trigger: GCGGTTGTCATTCCATTGTCATAGCCCTTCCCCTAG...CTTCTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTACGATTTGGGAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp TATGGCTGGGAACATCATCAAAGGCAATGGATACATTTAGGCCATATGAAAATTGGCGGCCGCCCAGCCTaGGGGCTGCATCCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: YGWEHHQRQWIHLGHMKIGGRPA*GLHPRS
Trigger: TGACCTGGGATGCAGCCCTCAGGCTGGGCGGCCGCC...AATTTTCATATGGCCTAAATGTATCCATTGCCTTTGATGATGTTCCCAGCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATACCCCTTCACTATGTTTaGTTCTCGCTCGTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPIPLHYV*FSLVCD
Trigger: ATCGCAGACGAGCGAGAATCAAACATAGTGAAGGGG...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp AAGGGCCAACCTCTGCCAGGAGAGATTGTAAACACACCACTGACAGCTTGGACAGCAGCTGGTTATTGGTaGCCACGAAGTACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: KGQPLPGEIVNTPLTAWTAAGYW*PRSTWE
Trigger: CTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGC...TGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCTCCTGGCAGAGGTTGGCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp TCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTCCTTTGGCCCTGGCTaGAAAGCCAACTCCCTAGGA +
Preference number: 4 (lower is better)
Translates to: SRQLCENENRRRAYSSNPSFGPG*KANSLG
Trigger: TCCTAGGGAGTTGGCTTTTCAGCCAGGGCCAAAGGA...GGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp GGTAGCTCTTGCTCTGGGTCTCTCATGTGGTTGCAGTCATCCACAAGTGCTGGAAGATTCCCAGTGCTATaGGCAGCAGCAGCAGATACA +
Preference number: 4 (lower is better)
Translates to: GSSCSGSLMWLQSSTSAGRFPVL*AAAADT
Trigger: TGTATCTGCTGCTGCTGCTCATAGCACTGGGAATCT...TCCAGCACTTGTGGATGACTGCAACCACATGAGAGACCCAGAGCAAGAGCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR GCA 90 bp GAAGGAGCAGATGGAAGGACTCCCCTAAAACCTAAGAGTGAGGGACTAGTAGTCAAACAGGAAGTCCGGTaGAGGAACAGGCGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: EGADGRTPLKPKSEGLVVKQEVR*RNRRVR
Trigger: CCTCACACGCCTGTTCCTGCACCGGACTTCCTGTTT...GACTACTAGTCCCTCACTCTTAGGTTTTAGGGGAGTCCTTCCATCTGCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp TATGGCTGGGAACATCATCAAAGGCAATGGATACATTTAGGCCATATGAAAATTGTTCAGCGCGGGGGCTaGGCCCGCGGACAATGGGCC +
Preference number: 4 (lower is better)
Translates to: YGWEHHQRQWIHLGHMKIVQRGG*ARGQWA
Trigger: GGCCCATTGTCCGCGGGCCCAGCCCCCGCGCTGAAC...AATTTTCATATGGCCTAAATGTATCCATTGCCTTTGATGATGTTCCCAGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTTTCACTCGCAGCAGCTaGTTATTGGTGACCACGAAG +
Preference number: 4 (lower is better)
Translates to: HIKAQAESQRPVTPLKEAFTRSS*LLVTTK
Trigger: CTTCGTGGTCACCAATAACCAGCTGCTGCGAGTGAA...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCATGACGGTAAACCAATaGCTGGAAAACCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGMTVNQ*LENQES
Trigger: GCTCTCCTGGTTTTCCAGCCATTGGTTTACCGTCAT...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATGTAGTCCCCGTTGACTaGAGTATGGCTGGGAACATC +
Preference number: 4 (lower is better)
Translates to: FSAFQKALEKGPTSARRDVVPVD*SMAGNI
Trigger: GATGTTCCCAGCCATACTCCAGTCAACGGGGACTAC...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCTTTTTCCTTTGGCCCTaGCTGAAAAGCCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGFFLWP*LKSQLP
Trigger: AGGGAGTTGGCTTTTCAGCCAGGGCCAAAGGAAAAA...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp CGTGGTTGCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGATTTTTCCTTTGGCCCTaGCTGAAAAGCCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: RGCRPQSRQLCENENRRRFFLWP*LKSQLP
Trigger: AGGGAGTTGGCTTTTCAGCCAGGGCCAAAGGAAAAA...TCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGCAACCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTCTCTAAAACACAGCCAGAAAAGAGGCTGTGGACACTGGCCAAACAGTGCACTGAGGCTCCATCCACATaGATCTGTGGCACACTGGGG +
Preference number: 4 (lower is better)
Translates to: FSKTQPEKRLWTLAKQCTEAPST*ICGTLG
Trigger: CCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTC...AGTGCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGGCTGTGTTTTAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATATACCGGGCCCTATTATaGCTAAAACCCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPIYRALL*LKPSRK
Trigger: CTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTA...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCAACCGCGGGAACGTGCTaGCACGTGTCCTCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAATAGTC*HVSSAE
Trigger: CTCCGCGGAGGACACGTGTCAGCACGTTCCCGCGGT...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp GGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTTCGCTATGACAATGGAATaGCAACCGCGGGAACGTGCT +
Preference number: 4 (lower is better)
Translates to: GSFVRMRTGGEPIAQIPFAMTME*QPRERA
Trigger: AGCACGTTCCCGCGGTTGTCATTCCATTGTCATAGC...GAAAGGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp GTCACTCCCAAATCGTACCGGGCCCTATTATGGCTAAAACCCAGCAGGAAGAAGCCCCTTCACTATGTTTaGTTCTCGCTCGTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: VTPKSYRALLWLKPSRKKPLHYV*FSLVCD
Trigger: ATCGCAGACGAGCGAGAATCAAACATAGTGAAGGGG...CTTCTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTACGATTTGGGAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATCCCCTTCACTATGTTTaGTTCTCGCTCGTCTGCGAT +
Preference number: 4 (lower is better)
Translates to: FSAFQKALEKGPTSARRDPLHYV*FSLVCD
Trigger: ATCGCAGACGAGCGAGAATCAAACATAGTGAAGGGG...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp TTCAGTGGGGCTTCTGGCTGTAAAACCTACATGTGGCCTCACTCTCTCTATGTGGCAGCTGGTTATTGGTaGCCACGAAGTACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: FSGASGCKTYMWPHSLYVAAGYW*PRSTWE
Trigger: CTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGC...CACATAGAGAGAGTGAGGCCACATGTAGGTTTTACAGCCAGAAGCCCCACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR TCA 90 bp TCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCCAACCTGGCTGGACATaGGGCATAGGAGGTACAGAA +
Preference number: 4 (lower is better)
Translates to: SRQLCENENRRRAYSSNPQPGWT*GIGGTE
Trigger: TTCTGTACCTCCTATGCCTCATGTCCAGCCAGGTTG...GGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp GCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTGTAAAACTAGTAGTCCCCGTTaGCTGGAGTATGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: AFQKALEKGPTSARRDCKTSSPR*LEYGWE
Trigger: TTCCCAGCCATACTCCAGTCAACGGGGACTACTAGT...TTTACAATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp ACCTGGCTGGACATGAGGCATAGGAGGTACAGAACAAGTTACCATAAGGCACATAAACAGGAAGTCCGGTaGAGGAACAGGCGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: TWLDMRHRRYRTSYHKAHKQEVR*RNRRVR
Trigger: CCTCACACGCCTGTTCCTGCACCGGACTTCCTGTTT...ATGTGCCTTATGGTAACTTGTTCTGTACCTCCTATGCCTCATGTCCAGCCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR GCA 90 bp CGTGGTTGCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGATTGTTCAGATGGCAGTaGAGGCCATTGTGGATAATG +
Preference number: 4 (lower is better)
Translates to: RGCRPQSRQLCENENRRRLFRWQ*RPLWIM
Trigger: CATTATCCACAATGGCCTGCACTGCCATCTGAACAA...TCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGCAACCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACACTGGGGCAGGCCTCTGTTTGTGGATAATGGAATaGAAGTTTTCTAGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: SEGGSIHMDLWHTGAGLCLWIME*KFSRRL
Trigger: TAGCCGCCTAGAAAACTTCCATTCCATTATCCACAA...ACAGAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTCCTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp GGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTTCAGAGGCTGTGGACACTaGCCAAACAGTGCACTAGGT +
Preference number: 4 (lower is better)
Translates to: GSFVRMRTGGEPIAQIPFRGCGH*PNSALG
Trigger: ACCTAGTGCACTGTTTGGCCAGTGTCCACAGCCTCT...GAAAGGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp CCTCTTGGGTGTCTCAAGTCAAAACAAGGCAACCGCCTAGTGATTTATAGTTCCCTCCGGCTCTCTGGGTaGCCAGAAGGCTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: PLGCLKSKQGNRLVIYSSLRLSG*PEGFSY
Trigger: GTAGGAAAAGCCTTCTGGCCACCCAGAGAGCCGGAG...GGAACTATAAATCACTAGGCGGTTGCCTTGTTTTGACTTGAGACACCCAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp GGAATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCTGGTTGCAGGTGAAAACCAGGAGAGCTaGCTCGAAGCCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: GIISASSVHVWQLMLVAGENQES*LEALLG
Trigger: ACCCAAGAGGGCTTCGAGCCAGCTCTCCTGGTTTTC...ACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CCA 90 bp GCTTCTGGCTGTAAAACCTACATGTGGCCTCACTCTCTCTATGTGGCCTGGGTGGTCATCCACAAGTGCTaGAATCATCTCAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ASGCKTYMWPHSLYVAWVVIHKC*NHLSLF
Trigger: GAAGAGGCTGAGATGATTCCAGCACTTGTGGATGAC...CACCCAGGCCACATAGAGAGAGTGAGGCCACATGTAGGTTTTACAGCCAGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR TCA 90 bp CTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTCGTCCGGATGGTCAATaGCCTCACACACGGCCACAC +
Preference number: 4 (lower is better)
Translates to: LAKQCTRFRNFPFYSAKTRPDGQ*PHTRPH
Trigger: GTGTGGCCGTGTGTGAGGTCATTGACCATCCGGACG...AGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp GCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTGTAAACTTGGGTGGCTTCTGTaGATACACCAGGAGGTACTT +
Preference number: 4 (lower is better)
Translates to: AFQKALEKGPTSARRDCKLGWLL*IHQEVL
Trigger: AAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAG...TTTACAATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp TTCTCTAAAACACAGCCAGAAAAGAGGCTGTGGACACTGGCCAAACAGTGCACTACTAGTAGTCCCCGTTaGCTGGAGTATGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FSKTQPEKRLWTLAKQCTTSSPR*LEYGWE
Trigger: TTCCCAGCCATACTCCAGTCAACGGGGACTACTAGT...AGTGCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGGCTGTGTTTTAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCACAGGTCACTGCGCGTTaGCGGGGTAGACGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAAQVTAR*RGRRAG
Trigger: ACCAGCGCGTCTACCCCGGCAACGCGCAGTGACCTG...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGCCGAGGCGAAGAGGCTaGACCGGAGGTCGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLPRRRG*TGGRRP
Trigger: TGGCCGCCGACCTCCGGTGCAGCCTCTTCGCCTCGG...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TATGGCTGGGAACATCATCAAAGGCAATGGATACATTTAGGCCATATGAAAATTCCGGGTTCCCAAGCCTaGGGTGGAGCTAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: YGWEHHQRQWIHLGHMKIPGSQA*GGARQG
Trigger: CCCCTGCCTAGCTCCACCCCAGGCTTGGGAACCCGG...AATTTTCATATGGCCTAAATGTATCCATTGCCTTTGATGATGTTCCCAGCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGTGGGCCCGCGGACAATaGGCCGTCAGGGGCCGGGTT +
Preference number: 4 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLWARGQ*AVRGRV
Trigger: AACCCGGCCCCTGACGGCCCATTGTCCGCGGGCCCA...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATATTGTCTCCGGAGGACTaGAGAAGTTCTTTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPILSPED*RSSFRL
Trigger: TAACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAA...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp TTCTCTAAAACACAGCCAGAAAAGAGGCTGTGGACACTGGCCAAACAGTGCACTGCCTTCCCTGCACTGTaGATTGTCAGGACCTTTGAG +
Preference number: 4 (lower is better)
Translates to: FSKTQPEKRLWTLAKQCTAFPAL*IVRTFE
Trigger: CTCAAAGGTCCTGACAATCCACAGTGCAGGGAAGGC...AGTGCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGGCTGTGTTTTAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp CGTGGTTGCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGACAGTGCAGGCCATTGTaGATAATGGAATGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: RGCRPQSRQLCENENRRRQCRPL*IMEWKF
Trigger: AAACTTCCATTCCATTATCCACAATGGCCTGCACTG...TCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGCAACCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp GCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTGTAAATCCTTCTTCTTGGTTTaGCACTTGACGTCCGGATGG +
Preference number: 4 (lower is better)
Translates to: AFQKALEKGPTSARRDCKSFFLV*HLTSGW
Trigger: CCATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGA...TTTACAATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTCTCTAAAACACAGCCAGAAAAGAGGCTGTGGACACTGGCCAAACAGTGCACTAAAGCATGGCACTCGTaGTTGCAGGCCACAGTCAAG +
Preference number: 4 (lower is better)
Translates to: FSKTQPEKRLWTLAKQCTKAWHS*LQATVK
Trigger: CTTGACTGTGGCCTGCAACCACGAGTGCCATGCTTT...AGTGCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGGCTGTGTTTTAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp CCTCTTGGGTGTCTCAAGTCAAAACAAGGCAACCGCCTAGTGATTTATAGTTCCGAAGACCTGAAAGCATaGCACTCGTGGTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PLGCLKSKQGNRLVIYSSEDLKA*HSWLQA
Trigger: GGCCTGCAACCACGAGTGCCATGCTTTCAGGTCTTC...GGAACTATAAATCACTAGGCGGTTGCCTTGTTTTGACTTGAGACACCCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TGGACACTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAATCCACATGGATCTGTaGCACACTGGGGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: WTLAKQCTRFRNFPFYSAIHMDL*HTGAGL
Trigger: GAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGAT...TGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAGTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp GCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTGTAAATACCGGGCCCTATTATaGCTAAAACCCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AFQKALEKGPTSARRDCKYRALL*LKPSRK
Trigger: CTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTA...TTTACAATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp GGAATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCTGGTTGCAGGTGGCCCACCCTTTAGATaGCCACACTCTGGCTTTACT +
Preference number: 4 (lower is better)
Translates to: GIISASSVHVWQLMLVAGGPPFR*PHSGFT
Trigger: AGTAAAGCCAGAGTGTGGCCATCTAAAGGGTGGGCC...ACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CCA 90 bp GGAATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCTGGTTGCAGGTTCACAGCATGGCAGGTaGGTCCTCTCTACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: GIISASSVHVWQLMLVAGSQHGR*VLSTFH
Trigger: GTGGAAAGTAGAGAGGACCCACCTGCCATGCTGTGA...ACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CCA 90 bp CAACCAGACCTATCCACATTTATTCATTCGGTGTTTATTGGCTCCTGTTCCAGCGGTGTCCTCACAGCATaGCAGGTGGGTCCTCTCTAC +
Preference number: 4 (lower is better)
Translates to: QPDLSTFIHSVFIGSCSSGVLTA*QVGPLY
Trigger: GTAGAGAGGACCCACCTGCCATGCTGTGAGGACACC...GCTGGAACAGGAGCCAATAAACACCGAATGAATAAATGTGGATAGGTCTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CCA 90 bp GGTAGCTCTTGCTCTGGGTCTCTCATGTGGTTGCAGTCATCCACAAGTGCTGGATCATTCGGTGTTTATTaGCTCCTGTTCCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: GSSCSGSLMWLQSSTSAGSFGVY*LLFQLS
Trigger: AGACAGCTGGAACAGGAGCCAATAAACACCGAATGA...TCCAGCACTTGTGGATGACTGCAACCACATGAGAGACCCAGAGCAAGAGCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR TCA 90 bp ACCTGGCTGGACATGAGGCATAGGAGGTACAGAACAAGTTACCATAAGGCACATCTTGGGTGGCTTCTGTaGATACACCAGGAGGTACTT +
Preference number: 4 (lower is better)
Translates to: TWLDMRHRRYRTSYHKAHLGWLL*IHQEVL
Trigger: AAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAG...ATGTGCCTTATGGTAACTTGTTCTGTACCTCCTATGCCTCATGTCCAGCCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATGATCTTTTCAAACTCTaGCTTCCCTGCACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: FSAFQKALEKGPTSARRDDLFKL*LPCTVD
Trigger: ATCCACAGTGCAGGGAAGGCAGAGTTTGAAAAGATC...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTTGTCTCCGGAGGACTaGAGAAGTTCTTTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: FSAFQKALEKGPTSARRDLSPED*RSSFRL
Trigger: TAACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAA...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp TCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCCATCCACATGGATCTGTGGCAAATTTGGCGTTGGCTaGGTCAAAGTACTCAATTTC +
Preference number: 4 (lower is better)
Translates to: SQRPVTPLKEAPSTWICGKFGVG*VKVLNF
Trigger: GAAATTGAGTACTTTGACCCAGCCAACGCCAAATTT...GCCACAGATCCATGTGGATGGAGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp TTCTCTAAAACACAGCCAGAAAAGAGGCTGTGGACACTGGCCAAACAGTGCACTTCGAAGCCCTGCTCTTaGGTGGCTTCTGTGAATACA +
Preference number: 4 (lower is better)
Translates to: FSKTQPEKRLWTLAKQCTSKPCS*VASVNT
Trigger: TGTATTCACAGAAGCCACCCAAGAGCAGGGCTTCGA...AGTGCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGGCTGTGTTTTAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261888.10
CDS-3UTR CCA 90 bp GCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTGTAAAATGACGGTAAACCAATaGCTGGAAAACCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: AFQKALEKGPTSARRDCKMTVNQ*LENQES
Trigger: GCTCTCCTGGTTTTCCAGCCATTGGTTTACCGTCAT...TTTACAATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CAA 72 bp GGAATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTaGATGCTGGTTGCAGGTTTGGTTTTCAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GIISASSVHVWQ*MLVAGLVFSGA
Trigger: AGCCCCACTGAAAACCAAACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR TCA 90 bp TGGACACTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAGCAGCTGGTTATTGGTaGCCACGAAGTACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: WTLAKQCTRFRNFPFYSAAAGYW*PRSTWE
Trigger: CTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGC...TGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAGTGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp ATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCTGGTTGCAGGTTTGCTTGGGTGGCTTCTGTaGATACACCAGGAGGTACTT +
Preference number: 4 (lower is better)
Translates to: IISASSVHVWQLMLVAGLLGWLL*IHQEVL
Trigger: AAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAG...CAAACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR TCA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCAGGCAGGCCTCTGTCTTaGAGGCCAGTAGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAAGRPLS*RPVGHR
Trigger: TCTGTGGCCTACTGGCCTTCAAGACAGAGGCCTGCC...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp TGGAATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCTGGTTGCAGGTACATGTTTGGCAGTTaGTGCTGGTTGCAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: WNHLSLFSTCLAVDAGCRYMFGS*CWLQVW
Trigger: CCAAACCTGCAACCAGCATCAACTGCCAAACATGTA...CCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR GCA 90 bp AGTAACTGGGCTCAGCTAGGTAGCTCTTGCTCTGGGTCTCTCATGTGGTTGCAGGTTCCAGCTGTCTACTaGTGCATAACATATCATATG +
Preference number: 4 (lower is better)
Translates to: SNWAQLGSSCSGSLMWLQVPAVY*CITYHM
Trigger: CATATGATATGTTATGCAGCAGTAGACAGCTGGAAC...CTGCAACCACATGAGAGACCCAGAGCAAGAGCTACCTAGCTGAGCCCAGTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CCA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCATGCCACCCATGGCCATaGGGGCTGTATATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAACHPWP*GLYMRA
Trigger: GGCCCTCATATACAGCCCCCATGGCCATGGGTGGCA...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp GGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTTCTTAAGAAGGAGCAGATaGAAGGACTCCCCTAAAACC +
Preference number: 4 (lower is better)
Translates to: GSFVRMRTGGEPIAQIPFLRRSR*KDSPKT
Trigger: GGTTTTAGGGGAGTCCTTCCATCTGCTCCTTCTTAA...GAAAGGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTCTCTAAAACACAGCCAGAAAAGAGGCTGTGGACACTGGCCAAACAGTGCACTTTTTTCCTTTGGCCCTaGCTGAAAAGCCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: FSKTQPEKRLWTLAKQCTFFLWP*LKSQLP
Trigger: AGGGAGTTGGCTTTTCAGCCAGGGCCAAAGGAAAAA...AGTGCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGGCTGTGTTTTAGAGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATCATGACTGTTCCTCTTaGGTGTCTCAAGTCAAAACA +
Preference number: 4 (lower is better)
Translates to: FSAFQKALEKGPTSARRDHDCSS*VSQVKT
Trigger: TGTTTTGACTTGAGACACCCAAGAGGAACAGTCATG...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp TATGGCTGGGAACATCATCAAAGGCAATGGATACATTTAGGCCATATGAAAATTGGCAGGCCTCTGTCTTaGAGGCCAGTAGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: YGWEHHQRQWIHLGHMKIGRPLS*RPVGHR
Trigger: TCTGTGGCCTACTGGCCTTCAAGACAGAGGCCTGCC...AATTTTCATATGGCCTAAATGTATCCATTGCCTTTGATGATGTTCCCAGCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCACATGGCACTCGTGGTTaGAGGCCACAGTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAAHGTRG*RPQSRQ
Trigger: CTGCCTTGACTGTGGCCTGCAACCACGAGTGCCATG...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp CAACCAGACCTATCCACATTTATTCATTCGGTGTTTATTGGCTCCTGTTCCAGCGCAGTCATCCACAAGTaGTGGAATCATCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QPDLSTFIHSVFIGSCSSAVIHK*WNHLSL
Trigger: GAGGCTGAGATGATTCCAGCACTTGTGGATGACTGC...GCTGGAACAGGAGCCAATAAACACCGAATGAATAAATGTGGATAGGTCTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR GCA 90 bp AATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCTGGTTGCAGGTTTGGTCTCTCATGTGGTTaGAGTCATCCACAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: NHLSLFSTCLAVDAGCRFGLSCG*SHPQVL
Trigger: CAGCACTTGTGGATGACTGCAACCACATGAGAGACC...AAACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CCA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATCATAAAATTTGGCGTTaGCTGGGTCAAAGTACTCAA +
Preference number: 4 (lower is better)
Translates to: FSAFQKALEKGPTSARRDHKIWR*LGQSTQ
Trigger: TTGAGTACTTTGACCCAGCCAACGCCAAATTTTATG...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp GCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTGTAAACAGTGCAGGCCATTGTaGATAATGGAATGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: AFQKALEKGPTSARRDCKQCRPL*IMEWKF
Trigger: AAACTTCCATTCCATTATCCACAATGGCCTGCACTG...TTTACAATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp TGGACACTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCATTCACTCGCAGCAGCTaGTTATTGGTGACCACGAAG +
Preference number: 4 (lower is better)
Translates to: WTLAKQCTRFRNFPFYSAFTRSS*LLVTTK
Trigger: CTTCGTGGTCACCAATAACCAGCTGCTGCGAGTGAA...TGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAGTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTCATCATCAAAGGCAATaGATACATTTAGGCCATATG +
Preference number: 4 (lower is better)
Translates to: HIKAQAESQRPVTPLKEAHHQRQ*IHLGHM
Trigger: CATATGGCCTAAATGTATCCATTGCCTTTGATGATG...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTCTCTAAAACACAGCCAGAAAAGAGGCTGTGGACACTGGCCAAACAGTGCACTTTAAGAAGGAGCAGATaGAAGGACTCCCCTAAAACC +
Preference number: 4 (lower is better)
Translates to: FSKTQPEKRLWTLAKQCTLRRSR*KDSPKT
Trigger: GGTTTTAGGGGAGTCCTTCCATCTGCTCCTTCTTAA...AGTGCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGGCTGTGTTTTAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp AATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCTGGTTGCAGGTTTACTCTGGCTTTACTCTaGCCACAGACACCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: NHLSLFSTCLAVDAGCRFTLALL*PQTPLQ
Trigger: CTGAAGAGGTGTCTGTGGCCAGAGTAAAGCCAGAGT...AAACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CCA 90 bp AATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCTGGTTGCAGGTTTTGCTGGTTGCAGGTTTaGTTTTCAGTGGGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: NHLSLFSTCLAVDAGCRFCWLQV*FSVGLL
Trigger: CAGAAGCCCCACTGAAAACCAAACCTGCAACCAGCA...AAACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CCA 90 bp TCATCCACAAGTGCTGGAATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGTCTGGGTCTCTCATGTaGTTGCAGTCATCCACAAGT +
Preference number: 4 (lower is better)
Translates to: SSTSAGIISASSVHVWQLSGSLM*LQSSTS
Trigger: ACTTGTGGATGACTGCAACCACATGAGAGACCCAGA...CAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CCA 90 bp TCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCAAATTTGGCGTTGGCTaGGTCAAAGTACTCAATTTC +
Preference number: 4 (lower is better)
Translates to: SRQLCENENRRRAYSSNPKFGVG*VKVLNF
Trigger: GAAATTGAGTACTTTGACCCAGCCAACGCCAAATTT...GGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp TGGACACTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAATGACGGTAAACCAATaGCTGGAAAACCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: WTLAKQCTRFRNFPFYSAMTVNQ*LENQES
Trigger: GCTCTCCTGGTTTTCCAGCCATTGGTTTACCGTCAT...TGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAGTGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCAGAAGACCTGAAAGCATaGCACTCGTGGTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAAEDLKA*HSWLQA
Trigger: GGCCTGCAACCACGAGTGCCATGCTTTCAGGTCTTC...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TATGGCTGGGAACATCATCAAAGGCAATGGATACATTTAGGCCATATGAAAATTATCCACATGGATCTGTaGCACACTGGGGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: YGWEHHQRQWIHLGHMKIIHMDL*HTGAGL
Trigger: GAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGAT...AATTTTCATATGGCCTAAATGTATCCATTGCCTTTGATGATGTTCCCAGCCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCACTAGGGGAAGGGCTATaGCAATGGAATGACAACCGC +
Preference number: 4 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAALGEGL*QWNDNR
Trigger: GCGGTTGTCATTCCATTGTCATAGCCCTTCCCCTAG...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp TTTTGCACTCACATACAAAGGCTGATGGAATTCAAAAATGATCCCACTGATTTTACAGGGGTGAGAACGTaGCGACAAGTGTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: FCTHIQRLMEFKNDPTDFTGVRT*RQVSSA
Trigger: GGCAGAGGACACTTGTCGGCACGTTCTCACCCCTGT...AAAATCAGTGGGATCATTTTTGAATTCCATCAGCCTTTGTATGTGAGTGCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp ACCTGGCTGGACATGAGGCATAGGAGGTACAGAACAAGTTACCATAAGGCACATCATAAAATTTGGCGTTaGCTGGGTCAAAGTACTCAA +
Preference number: 4 (lower is better)
Translates to: TWLDMRHRRYRTSYHKAHHKIWR*LGQSTQ
Trigger: TTGAGTACTTTGACCCAGCCAACGCCAAATTTTATG...ATGTGCCTTATGGTAACTTGTTCTGTACCTCCTATGCCTCATGTCCAGCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp TTCTCTAAAACACAGCCAGAAAAGAGGCTGTGGACACTGGCCAAACAGTGCACTTGCGATCTATCTCCTTaGAATCCTTCTTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FSKTQPEKRLWTLAKQCTCDLSP*NPSSWF
Trigger: AAACCAAGAAGAAGGATTCCAAGGAGATAGATCGCA...AGTGCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGGCTGTGTTTTAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp GGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTTCCATCATCAAAGGCAATaGATACATTTAGGCCATATG +
Preference number: 4 (lower is better)
Translates to: GSFVRMRTGGEPIAQIPFHHQRQ*IHLGHM
Trigger: CATATGGCCTAAATGTATCCATTGCCTTTGATGATG...GAAAGGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp TATGGCTGGGAACATCATCAAAGGCAATGGATACATTTAGGCCATATGAAAATTCAACCTGGCTGGACATaGGGCATAGGAGGTACAGAA +
Preference number: 4 (lower is better)
Translates to: YGWEHHQRQWIHLGHMKIQPGWT*GIGGTE
Trigger: TTCTGTACCTCCTATGCCTCATGTCCAGCCAGGTTG...AATTTTCATATGGCCTAAATGTATCCATTGCCTTTGATGATGTTCCCAGCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TATGGCTGGGAACATCATCAAAGGCAATGGATACATTTAGGCCATATGAAAATTCACTTGACGTCCGGATaGTCAATGACCTCACACACG +
Preference number: 4 (lower is better)
Translates to: YGWEHHQRQWIHLGHMKIHLTSG*SMTSHT
Trigger: CGTGTGTGAGGTCATTGACCATCCGGACGTCAAGTG...AATTTTCATATGGCCTAAATGTATCCATTGCCTTTGATGATGTTCCCAGCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTTTGCACTCACATACAAAGGCTGATGGAATTCAAAAATGATCCCACTGATTTTGAAAACCAGGAGAGCTaGCTCGAAGCCCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: FCTHIQRLMEFKNDPTDFENQES*LEALLL
Trigger: CAAGAGCAGGGCTTCGAGCCAGCTCTCCTGGTTTTC...AAAATCAGTGGGATCATTTTTGAATTCCATCAGCCTTTGTATGTGAGTGCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261888.10
CDS-3UTR CCA 90 bp TATGGCTGGGAACATCATCAAAGGCAATGGATACATTTAGGCCATATGAAAATTAGAGGCTGTGGACACTaGCCAAACAGTGCACTAGGT +
Preference number: 4 (lower is better)
Translates to: YGWEHHQRQWIHLGHMKIRGCGH*PNSALG
Trigger: ACCTAGTGCACTGTTTGGCCAGTGTCCACAGCCTCT...AATTTTCATATGGCCTAAATGTATCCATTGCCTTTGATGATGTTCCCAGCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CAA 72 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTaGTTTTTAAATGCAGCAGGGCTTTTTCCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: RDCKHTTDSLDT*FLNAAGLFPLA
Trigger: GGCCAAAGGAAAAAGCCCTGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CAA 72 bp TCTGCCAGGAGAGATTGTAAACACACCACTGACAGCTaGGACACTTTGTTTTTAAATGCAGCAGGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SARRDCKHTTDS*DTLFLNAAGLF
Trigger: AAAAAGCCCTGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCTCCTGGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
3UTR CAA 72 bp AACCAGACCTATCCACATTTATTCATTCGGTGTTTATaGGCTCCTGTTCCAGCTGTCTACTGCTGCATAACA +
Preference number: 4 (lower is better)
Translates to: NQTYPHLFIRCL*APVPAVYCCIT
Trigger: TGTTATGCAGCAGTAGACAGCTGGAACAGGAGCCAATAAACACCGAATGAATAAATGTGGATAGGTCTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR TCA 90 bp TTTTGCACTCACATACAAAGGCTGATGGAATTCAAAAATGATCCCACTGATTTTGCTATGACAATGGAATaGCAACCGCGGGAACGTGCT +
Preference number: 4 (lower is better)
Translates to: FCTHIQRLMEFKNDPTDFAMTME*QPRERA
Trigger: AGCACGTTCCCGCGGTTGTCATTCCATTGTCATAGC...AAAATCAGTGGGATCATTTTTGAATTCCATCAGCCTTTGTATGTGAGTGCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGCTAGGGGAAGGGCTATaGCAATGGAATGACAACCGC +
Preference number: 4 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLLGEGL*QWNDNR
Trigger: GCGGTTGTCATTCCATTGTCATAGCCCTTCCCCTAG...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TGGACACTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCATTGTGGATAATGGAATaGAAGTTTTCTAGGCGGCTA +
Preference number: 4 (lower is better)
Translates to: WTLAKQCTRFRNFPFYSALWIME*KFSRRL
Trigger: TAGCCGCCTAGAAAACTTCCATTCCATTATCCACAA...TGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAGTGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGGTAGTCCCCGTTGACTaGAGTATGGCTGGGAACATC +
Preference number: 4 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLVVPVD*SMAGNI
Trigger: GATGTTCCCAGCCATACTCCAGTCAACGGGGACTAC...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTTTGCACTCACATACAAAGGCTGATGGAATTCAAAAATGATCCCACTGATTTTAAAGCATGGCACTCGTaGTTGCAGGCCACAGTCAAG +
Preference number: 4 (lower is better)
Translates to: FCTHIQRLMEFKNDPTDFKAWHS*LQATVK
Trigger: CTTGACTGTGGCCTGCAACCACGAGTGCCATGCTTT...AAAATCAGTGGGATCATTTTTGAATTCCATCAGCCTTTGTATGTGAGTGCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR TCA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGCTTGGGTGGCTTCTGTaGATACACCAGGAGGTACTT +
Preference number: 4 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLLGWLL*IHQEVL
Trigger: AAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAG...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCATTGTTCAGATGGCAGTaGAGGCCATTGTGGATAATG +
Preference number: 4 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAALFRWQ*RPLWIM
Trigger: CATTATCCACAATGGCCTGCACTGCCATCTGAACAA...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGTTCACTCGCAGCAGCTaGTTATTGGTGACCACGAAG +
Preference number: 4 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLFTRSS*LLVTTK
Trigger: CTTCGTGGTCACCAATAACCAGCTGCTGCGAGTGAA...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR GCA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGGATCTTTTCAAACTCTaGCTTCCCTGCACTGTGGAT +
Preference number: 4 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLDLFKL*LPCTVD
Trigger: ATCCACAGTGCAGGGAAGGCAGAGTTTGAAAAGATC...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CCA 90 bp TTTTGCACTCACATACAAAGGCTGATGGAATTCAAAAATGATCCCACTGATTTTCATGACTGTTCCTCTTaGGTGTCTCAAGTCAAAACA +
Preference number: 4 (lower is better)
Translates to: FCTHIQRLMEFKNDPTDFHDCSS*VSQVKT
Trigger: TGTTTTGACTTGAGACACCCAAGAGGAACAGTCATG...AAAATCAGTGGGATCATTTTTGAATTCCATCAGCCTTTGTATGTGAGTGCAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTTTGCACTCACATACAAAGGCTGATGGAATTCAAAAATGATCCCACTGATTTTTGCGATCTATCTCCTTaGAATCCTTCTTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FCTHIQRLMEFKNDPTDFCDLSP*NPSSWF
Trigger: AAACCAAGAAGAAGGATTCCAAGGAGATAGATCGCA...AAAATCAGTGGGATCATTTTTGAATTCCATCAGCCTTTGTATGTGAGTGCAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CCA 90 bp TTTTGCACTCACATACAAAGGCTGATGGAATTCAAAAATGATCCCACTGATTTTCATCATCAAAGGCAATaGATACATTTAGGCCATATG +
Preference number: 4 (lower is better)
Translates to: FCTHIQRLMEFKNDPTDFHHQRQ*IHLGHM
Trigger: CATATGGCCTAAATGTATCCATTGCCTTTGATGATG...AAAATCAGTGGGATCATTTTTGAATTCCATCAGCCTTTGTATGTGAGTGCAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS TCA 90 bp GGCCAGCATGTCGCGGCCCGCCGCCTCCCTGGCGGCCGCCCAGCCTaGGGGCTGCATCCCAGGTCACTGCGCGTTGCCGGGGTAGACGCG +
Preference number: 5 (lower is better)
Translates to: GQHVAARRLPGGRPA*GLHPRSLRVAGVDA
Trigger: CGCGTCTACCCCGGCAACGCGCAGTGACCTGGGATGCAGCCCTCAGGCTGGGCGGCCGCCAGGGAGGCGGCGGGCCGCGACATGCTGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS CCA 90 bp TGCACCGGAGGTCGGCGGCCAGCATGTCGCGGCCCGCCGCCTCCCTaGCGGCCGCCCAGCCTGAGGGCTGCATCCCAGGTCACTGCGCGT +
Preference number: 5 (lower is better)
Translates to: CTGGRRPACRGPPPP*RPPSLRAASQVTAR
Trigger: ACGCGCAGTGACCTGGGATGCAGCCCTCAGGCTGGGCGGCCGCCAGGGAGGCGGCGGGCCGCGACATGCTGGCCGCCGACCTCCGGTGCA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS CCA 90 bp ATGACAGGGGTGAGAACGTGCCGACAAGTGTCCTCTGCCGGGGTCTaGGCCGCGGCTCGCCGCCGAAGAGAGAGACCGAGGCCTGGACCG +
Preference number: 5 (lower is better)
Translates to: MTGVRTCRQVSSAGV*AAARRRRERPRPGP
Trigger: CGGTCCAGGCCTCGGTCTCTCTCTTCGGCGGCGAGCCGCGGCCCAGACCCCGGCAGAGGACACTTGTCGGCACGTTCTCACCCCTGTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS GCA 90 bp TCACACACGGCCACACAGCTAAGGATGGGGCCGAGGAGGCTGTGCTaGCACCCATGGCCATGGGGGCTGTATATGAGGGCCAGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: SHTATQLRMGPRRLC*HPWPWGLYMRARLK
Trigger: CTTGAGCCTGGCCCTCATATACAGCCCCCATGGCCATGGGTGGCAGCACAGCCTCCTCGGCCCCATCCTTAGCTGTGTGGCCGTGTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000560149.5
ENST00000649807.2
CDS-3UTR CAA 90 bp CTGTGGTCCCCCAACTGGCCCCTAGGCTCAACCTGGCTGGACATGAGGCATAGGTGGCTCGAAGCCCTCTaGGGTGGCTTCTGTGAATAC +
Preference number: 5 (lower is better)
Translates to: LWSPNWPLGSTWLDMRHRWLEAL*GGFCEY
Trigger: GTATTCACAGAAGCCACCCAAGAGGGCTTCGAGCCA...CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGGCCAGTTGGGGGACCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp CTGTGGTCCCCCAACTGGCCCCTAGGCTCAACCTGGCTGGACATGAGGCATAGGCCCCCTTCACTATGTTaGATTCTCGCTCGTCTGCGA +
Preference number: 5 (lower is better)
Translates to: LWSPNWPLGSTWLDMRHRPPSLC*ILARLR
Trigger: TCGCAGACGAGCGAGAATCAAACATAGTGAAGGGGG...CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGGCCAGTTGGGGGACCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp CTGTGGTCCCCCAACTGGCCCCTAGGCTCAACCTGGCTGGACATGAGGCATAGGTTGGAATCCTTCTTCTaGGTTTGGCACTTGACGTCC +
Preference number: 5 (lower is better)
Translates to: LWSPNWPLGSTWLDMRHRLESFF*VWHLTS
Trigger: GGACGTCAAGTGCCAAACCAAGAAGAAGGATTCCAA...CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGGCCAGTTGGGGGACCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp CTGTGGTCCCCCAACTGGCCCCTAGGCTCAACCTGGCTGGACATGAGGCATAGGTGGAAAGCAGAGGAGTaGATGACACTCACTATGAGC +
Preference number: 5 (lower is better)
Translates to: LWSPNWPLGSTWLDMRHRWKAEE*MTLTMS
Trigger: GCTCATAGTGAGTGTCATCAACTCCTCTGCTTTCCA...CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGGCCAGTTGGGGGACCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCATGGCACTCGTGGTaGCAGGCCACAGTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPIAWHSW*QATVKA
Trigger: TGCCTTGACTGTGGCCTGCAACCACGAGTGCCATGC...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS CCA 90 bp CAGCTCACCAGGTCCCAGGCCCGTTTGTGGTTGTCTCCGGAGGACTaGAGAAGTTCTTTCAGGTTAGGTAACTTGCTGGCATCTGCAAGC +
Preference number: 5 (lower is better)
Translates to: QLTRSQARLWLSPED*RSSFRLGNLLASAS
Trigger: GCTTGCAGATGCCAGCAAGTTACCTAACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000560149.5
ENST00000649807.2
CDS CCA 90 bp TTGTCCTGGGCCCACCCTTTAGATGGCCACACTCTGGCTTTACTCTaGCCACAGACACCTCTTCAGATTCCCAGTGCTATGAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LSWAHPLDGHTLALL*PQTPLQIPSAMSSS
Trigger: GCTGCTGCTCATAGCACTGGGAATCTGAAGAGGTGTCTGTGGCCAGAGTAAAGCCAGAGTGTGGCCATCTAAAGGGTGGGCCCAGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CAA 90 bp TCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACACTGGGGCAGGCCTCTGTATCCTTCTTCTTGGTTaGGCACTTGACGTCCGGATG +
Preference number: 5 (lower is better)
Translates to: SEGGSIHMDLWHTGAGLCILLLG*ALDVRM
Trigger: CATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGAT...ACAGAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTCCTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTGTGACCACGAAGTACTaGGGAGGGATGTCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: HIKAQAESQRPVTPLKEAVTTKY*GGMSPP
Trigger: AGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCAC...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp GGTAGCTCTTGCTCTGGGTCTCTCATGTGGTTGCAGTCATCCACAAGTGCTGGAGTGACCACGAAGTACTaGGGAGGGATGTCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: GSSCSGSLMWLQSSTSAGVTTKY*GGMSPP
Trigger: AGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCAC...TCCAGCACTTGTGGATGACTGCAACCACATGAGAGACCCAGAGCAAGAGCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CAA 90 bp TCCATGAGGCCCTTGTCCTGGGCCCACCCTTTAGATGGCCACACTCTGGCTTTACGCAGCAGCTGGTTATaGGTGACCACGAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: SMRPLSWAHPLDGHTLALRSSWL*VTTKYL
Trigger: CAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCG...TAAAGCCAGAGTGTGGCCATCTAAAGGGTGGGCCCAGGACAAGGGCCTCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CAA 90 bp CTGTGGTCCCCCAACTGGCCCCTAGGCTCAACCTGGCTGGACATGAGGCATAGGGACAGCTTGGACACTTaGTTTTTAAATGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: LWSPNWPLGSTWLDMRHRDSLDT*FLNAAG
Trigger: CCCTGCTGCATTTAAAAACAAAGTGTCCAAGCTGTC...CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGGCCAGTTGGGGGACCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS CCA 90 bp ATCTCCTTGGAATCCTTCTTCTTGGTTTGGCACTTGACGTCCGGATaGTCAATGACCTCACACACGGCCACACAGCTAAGGATGGGGCCG +
Preference number: 5 (lower is better)
Translates to: ISLESFFLVWHLTSG*SMTSHTATQLRMGP
Trigger: CGGCCCCATCCTTAGCTGTGTGGCCGTGTGTGAGGTCATTGACCATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGATTCCAAGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000560149.5
ENST00000649807.2
CDS CCA 90 bp GGTGGCTTCTGTGAATACACCAGGAGGTACTTCACTCGCAGCAGCTaGTTATTGGTGACCACGAAGTACTTGGGAGGGATGTCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: GGFCEYTRRYFTRSS*LLVTTKYLGGMSPP
Trigger: AGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCGAGTGAAGTACCTCCTGGTGTATTCACAGAAGCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000559805.1
ENST00000560149.5
ENST00000649807.2
CDS CCA 90 bp ATGAGCAGCAGCAGCAGATACAGGGATATCATGACGGTAAACCAATaGCTGGAAAACCAGGAGAGCTGGCTCGAAGCCCTCTTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: MSSSSRYRDIMTVNQ*LENQESWLEALLGG
Trigger: GCCACCCAAGAGGGCTTCGAGCCAGCTCTCCTGGTTTTCCAGCCATTGGTTTACCGTCATGATATCCCTGTATCTGCTGCTGCTGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000444347.2
ENST00000559805.1
ENST00000560149.5
ENST00000649807.2
CDS CCA 90 bp ACAGTTCCTTTCCATGAGGCCCTTGTCCTGGGCCCACCCTTTAGATaGCCACACTCTGGCTTTACTCTGGCCACAGACACCTCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: TVPFHEALVLGPPFR*PHSGFTLATDTSSD
Trigger: ATCTGAAGAGGTGTCTGTGGCCAGAGTAAAGCCAGAGTGTGGCCATCTAAAGGGTGGGCCCAGGACAAGGGCCTCATGGAAAGGAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CAA 90 bp GGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTTCCAGGCCCGTTTGTGGTaGTCTCCGGAGGACTGGAGA +
Preference number: 5 (lower is better)
Translates to: GSFVRMRTGGEPIAQIPFQARLW*SPEDWR
Trigger: TCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTG...GAAAGGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp CGTGGTTGCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGACCCCCTTCACTATGTTaGATTCTCGCTCGTCTGCGA +
Preference number: 5 (lower is better)
Translates to: RGCRPQSRQLCENENRRRPPSLC*ILARLR
Trigger: TCGCAGACGAGCGAGAATCAAACATAGTGAAGGGGG...TCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGCAACCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp TCTGAAGGAGGCTCCATCCACATGGATCTGTGGCACACTGGGGCAGGCCTCTGTTGGAAAGCAGAGGAGTaGATGACACTCACTATGAGC +
Preference number: 5 (lower is better)
Translates to: SEGGSIHMDLWHTGAGLCWKAEE*MTLTMS
Trigger: GCTCATAGTGAGTGTCATCAACTCCTCTGCTTTCCA...ACAGAGGCCTGCCCCAGTGTGCCACAGATCCATGTGGATGGAGCCTCCTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCAGGGCTTTTTCCTTaGGCCCTGGCTGAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPIAGLFP*ALAEKP
Trigger: TGGCTTTTCAGCCAGGGCCAAAGGAAAAAGCCCTGC...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS GCA 90 bp GGCGTTGGCTGGGTCAAAGTACTCAATTTCAAACAGGAAGTCCGGTaGAGGAACAGGCGTGTGAGGAGCCCCAGTCAGCTTTTGGATCTT +
Preference number: 5 (lower is better)
Translates to: GVGWVKVLNFKQEVR*RNRRVRSPSQLLDL
Trigger: AAGATCCAAAAGCTGACTGGGGCTCCTCACACGCCTGTTCCTGCACCGGACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000649807.2
CDS CCA 90 bp ATGAGCAGCAGCAGCAGATACAGGGATATCATGACGGTAAACCAATaGCTGGAAAACCAGGAGAGCTGGCTCGAAGCCCTGCTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: MSSSSRYRDIMTVNQ*LENQESWLEALLLG
Trigger: ACCCAAGAGCAGGGCTTCGAGCCAGCTCTCCTGGTTTTCCAGCCATTGGTTTACCGTCATGATATCCCTGTATCTGCTGCTGCTGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261888.10
CDS-3UTR CAA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATACCGAACAAGGATGTCTaGTTCAGATGGCAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPIPNKDV*FRWQCR
Trigger: CCTGCACTGCCATCTGAACAAGACATCCTTGTTCGG...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp GCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTGTAAAGTGACCACGAAGTACTaGGGAGGGATGTCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: AFQKALEKGPTSARRDCKVTTKY*GGMSPP
Trigger: AGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCAC...TTTACAATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp GTCACTCCCAAATCGTACCGGGCCCTATTATGGCTAAAACCCAGCAGGAAGAAGGCAGGGCTTTTTCCTTaGGCCCTGGCTGAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: VTPKSYRALLWLKPSRKKAGLFP*ALAEKP
Trigger: TGGCTTTTCAGCCAGGGCCAAAGGAAAAAGCCCTGC...CTTCTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTACGATTTGGGAGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp CTGTGGTCCCCCAACTGGCCCCTAGGCTCAACCTGGCTGGACATGAGGCATAGGCACACCACTGACAGCTaGGACACTTTGTTTTTAAAT +
Preference number: 5 (lower is better)
Translates to: LWSPNWPLGSTWLDMRHRHTTDS*DTLFLN
Trigger: ATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTG...CCTATGCCTCATGTCCAGCCAGGTTGAGCCTAGGGGCCAGTTGGGGGACCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp GCAGGCCACAGTCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATATCCCTGCACTGTGGATaGTCAGGACCTTTGAGGATA +
Preference number: 5 (lower is better)
Translates to: AGHSQGSFVRMRTGGEPISLHCG*SGPLRI
Trigger: TATCCTCAAAGGTCCTGACAATCCACAGTGCAGGGA...TATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGACTGTGGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp GTCACTCCCAAATCGTACCGGGCCCTATTATGGCTAAAACCCAGCAGGAAGAAGCGCAGCAGCTGGTTATaGGTGACCACGAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: VTPKSYRALLWLKPSRKKRSSWL*VTTKYL
Trigger: CAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCG...CTTCTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTACGATTTGGGAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS CCA 90 bp ACCTTTGAGGATAAAATCCAGCTCACCAGGTCCCAGGCCCGTTTGTaGTTGTCTCCGGAGGACTGGAGAAGTTCTTTCAGGTTAGGTAAC +
Preference number: 5 (lower is better)
Translates to: TFEDKIQLTRSQARL*LSPEDWRSSFRLGN
Trigger: GTTACCTAACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCAAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000560149.5
ENST00000649807.2
CDS-3UTR CAA 90 bp TTTTCCGCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTGGCAGTGCAGGCCATaGTGGATAATGGAATGGAAG +
Preference number: 5 (lower is better)
Translates to: FSAFQKALEKGPTSARRDWQCRP*WIMEWK
Trigger: CTTCCATTCCATTATCCACAATGGCCTGCACTGCCA...ATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGCGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp GTCACTCCCAAATCGTACCGGGCCCTATTATGGCTAAAACCCAGCAGGAAGAAGATCCTTCTTCTTGGTTaGGCACTTGACGTCCGGATG +
Preference number: 5 (lower is better)
Translates to: VTPKSYRALLWLKPSRKKILLLG*ALDVRM
Trigger: CATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGAT...CTTCTTCCTGCTGGGTTTTAGCCATAATAGGGCCCGGTACGATTTGGGAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp GGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTTCCCCCCTTCACTATGTTaGATTCTCGCTCGTCTGCGA +
Preference number: 5 (lower is better)
Translates to: GSFVRMRTGGEPIAQIPFPPSLC*ILARLR
Trigger: TCGCAGACGAGCGAGAATCAAACATAGTGAAGGGGG...GAAAGGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp GAAGGAGCAGATGGAAGGACTCCCCTAAAACCTAAGAGTGAGGGACTAGTAGTCCGCAGCAGCTGGTTATaGGTGACCACGAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: EGADGRTPLKPKSEGLVVRSSWL*VTTKYL
Trigger: CAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCG...GACTACTAGTCCCTCACTCTTAGGTTTTAGGGGAGTCCTTCCATCTGCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTGGATTGTCAGGACCTTaGAGGATAAAATCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: HIKAQAESQRPVTPLKEAGLSGP*RIKSSS
Trigger: TGAGCTGGATTTTATCCTCAAAGGTCCTGACAATCC...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp GCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTGTAAATCCCTGCACTGTGGATaGTCAGGACCTTTGAGGATA +
Preference number: 5 (lower is better)
Translates to: AFQKALEKGPTSARRDCKSLHCG*SGPLRI
Trigger: TATCCTCAAAGGTCCTGACAATCCACAGTGCAGGGA...TTTACAATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp GCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTGTAAATTCTTGGTTTGGCACTaGACGTCCGGATGGTCAATG +
Preference number: 5 (lower is better)
Translates to: AFQKALEKGPTSARRDCKFLVWH*TSGWSM
Trigger: CATTGACCATCCGGACGTCAAGTGCCAAACCAAGAA...TTTACAATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp TCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTCTTGGTTTGGCACTaGACGTCCGGATGGTCAATG +
Preference number: 5 (lower is better)
Translates to: SRQLCENENRRRAYSSNPFLVWH*TSGWSM
Trigger: CATTGACCATCCGGACGTCAAGTGCCAAACCAAGAA...GGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp GGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTTCATCCTTCTTCTTGGTTaGGCACTTGACGTCCGGATG +
Preference number: 5 (lower is better)
Translates to: GSFVRMRTGGEPIAQIPFILLLG*ALDVRM
Trigger: CATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGAT...GAAAGGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp CACATTAAAGCCCAGGCTGAGTCTCAAAGACCTGTGACCCCTCTGAAGGAGGCTGACAGCTTGGACACTTaGTTTTTAAATGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: HIKAQAESQRPVTPLKEADSLDT*FLNAAG
Trigger: CCCTGCTGCATTTAAAAACAAAGTGTCCAAGCTGTC...AGCCTCCTTCAGAGGGGTCACAGGTCTTTGAGACTCAGCCTGGGCTTTAATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp CTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTGCATGGCACTCGTGGTaGCAGGCCACAGTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: LAKQCTRFRNFPFYSAKTAWHSW*QATVKA
Trigger: TGCCTTGACTGTGGCCTGCAACCACGAGTGCCATGC...AGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp ATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCTGGTTGCAGGTTTGTGGCTCGAAGCCCTCTaGGGTGGCTTCTGTGAATAC +
Preference number: 5 (lower is better)
Translates to: IISASSVHVWQLMLVAGLWLEAL*GGFCEY
Trigger: GTATTCACAGAAGCCACCCAAGAGGGCTTCGAGCCA...CAAACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CAA 90 bp CCTCTTGGGTGTCTCAAGTCAAAACAAGGCAACCGCCTAGTGATTTATAGTTCCTGGCTCGAAGCCCTCTaGGGTGGCTTCTGTGAATAC +
Preference number: 5 (lower is better)
Translates to: PLGCLKSKQGNRLVIYSSWLEAL*GGFCEY
Trigger: GTATTCACAGAAGCCACCCAAGAGGGCTTCGAGCCA...GGAACTATAAATCACTAGGCGGTTGCCTTGTTTTGACTTGAGACACCCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444347.2
ENST00000649807.2
CDS GCA 90 bp TTCAGATGCATTCGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTTaGTGGCTCAGGAATGAAACTACAGACCTTCACGGTGAGCATTAC +
Preference number: 5 (lower is better)
Translates to: FRCIRSFFLLVGSWS*WLRNETTDLHGEHY
Trigger: GTAATGCTCACCGTGAAGGTCTGTAGTTTCATTCCTGAGCCAGCAAGACCACGAACCCACCAGAAGGAAGAAACTCCGAATGCATCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558873.1
CDS CCA 90 bp AGATGCATTCGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTTGCTaGCTCAGGAATGAAACTACAGACCTTCACGGTGAGCATTACAAC +
Preference number: 5 (lower is better)
Translates to: RCIRSFFLLVGSWSC*LRNETTDLHGEHYN
Trigger: GTTGTAATGCTCACCGTGAAGGTCTGTAGTTTCATTCCTGAGCCAGCAAGACCACGAACCCACCAGAAGGAAGAAACTCCGAATGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558873.1
CDS CCA 90 bp GCTGCTGACGGCCATGCCTACAGACAGCCAAGAATCTATGTAGTCTaGGCTATTTTCCTCAACAATGGTGCCACCTTTAATCCCAATGTG +
Preference number: 5 (lower is better)
Translates to: AADGHAYRQPRIYVV*AIFLNNGATFNPNV
Trigger: CACATTGGGATTAAAGGTGGCACCATTGTTGAGGAAAATAGCCCAGACTACATAGATTCTTGGCTGTCTGTAGGCATGGCCGTCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558873.1
CDS-3UTR CAA 90 bp TTCTCTAAAACACAGCCAGAAAAGAGGCTGTGGACACTGGCCAAACAGTGCACTTTCAGGTTAGGTAACTaGCTGGCATCTGCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: FSKTQPEKRLWTLAKQCTFRLGN*LASASR
Trigger: CCTGCTTGCAGATGCCAGCAAGTTACCTAACCTGAA...AGTGCACTGTTTGGCCAGTGTCCACAGCCTCTTTTCTGGCTGTGTTTTAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCAAGGTCCCAGGCCCGTTaGTGGTTGTCTCCGGAGGAC +
Preference number: 5 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAARSQAR*WLSPED
Trigger: GTCCTCCGGAGACAACCACAAACGGGCCTGGGACCT...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp TCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTTGGAATCCTTCTTCTaGGTTTGGCACTTGACGTCC +
Preference number: 5 (lower is better)
Translates to: SRQLCENENRRRAYSSNPLESFF*VWHLTS
Trigger: GGACGTCAAGTGCCAAACCAAGAAGAAGGATTCCAA...GGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp TGGACACTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCACTCGAAGCCCTGCTCTaGGGTGGCTTCTGTGAATAC +
Preference number: 5 (lower is better)
Translates to: WTLAKQCTRFRNFPFYSALEALL*GGFCEY
Trigger: GTATTCACAGAAGCCACCCAAGAGCAGGGCTTCGAG...TGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAGTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261888.10
CDS-3UTR CAA 90 bp TCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCTGGAAAGCAGAGGAGTaGATGACACTCACTATGAGC +
Preference number: 5 (lower is better)
Translates to: SRQLCENENRRRAYSSNPWKAEE*MTLTMS
Trigger: GCTCATAGTGAGTGTCATCAACTCCTCTGCTTTCCA...GGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp GGAATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCTGGTTGCAGGTATGCTGGTTGCAGGTTaGGTTTTCAGTGGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GIISASSVHVWQLMLVAGMLVAG*VFSGAS
Trigger: AGAAGCCCCACTGAAAACCAAACCTGCAACCAGCAT...ACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS TCA 90 bp ATGAGGCATAGGAGGTACAGAACAAGTTACCATAAGGCACATAGTTaGGGTAGCCCCCACACCAGGCCCAGAAAGATTATCTTTTCGCAC +
Preference number: 5 (lower is better)
Translates to: MRHRRYRTSYHKAHS*GSPHTRPRKIIFSH
Trigger: GTGCGAAAAGATAATCTTTCTGGGCCTGGTGTGGGGGCTACCTCAACTATGTGCCTTATGGTAACTTGTTCTGTACCTCCTATGCCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000560149.5
ENST00000649807.2
CDS-3UTR CAA 90 bp ACCTGGCTGGACATGAGGCATAGGAGGTACAGAACAAGTTACCATAAGGCACATTTGGAATCCTTCTTCTaGGTTTGGCACTTGACGTCC +
Preference number: 5 (lower is better)
Translates to: TWLDMRHRRYRTSYHKAHLESFF*VWHLTS
Trigger: GGACGTCAAGTGCCAAACCAAGAAGAAGGATTCCAA...ATGTGCCTTATGGTAACTTGTTCTGTACCTCCTATGCCTCATGTCCAGCCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp GCCTTCCAGAAGGCATTAGAGAAAGGGCCAACCTCTGCCAGGAGAGATTGTAAAGACAGCTTGGACACTTaGTTTTTAAATGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: AFQKALEKGPTSARRDCKDSLDT*FLNAAG
Trigger: CCCTGCTGCATTTAAAAACAAAGTGTCCAAGCTGTC...TTTACAATCTCTCCTGGCAGAGGTTGGCCCTTTCTCTAATGCCTTCTGGAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCAGCATGGCACTCGTGGTaGCAGGCCACAGTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAAAWHSW*QATVKA
Trigger: TGCCTTGACTGTGGCCTGCAACCACGAGTGCCATGC...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp AATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCTGGTTGCAGGTTTGGGTCTCTCATGTGGTaGCAGTCATCCACAAGTGCT +
Preference number: 5 (lower is better)
Translates to: NHLSLFSTCLAVDAGCRFGSLMW*QSSTSA
Trigger: AGCACTTGTGGATGACTGCAACCACATGAGAGACCC...AAACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CAA 90 bp ATGTGGTTGCAGTCATCCACAAGTGCTGGAATCATCTCAGCCTCTTCAGTACATGTACATGTTTGGCAGTaGATGCTGGTTGCAGGTTTG +
Preference number: 5 (lower is better)
Translates to: MWLQSSTSAGIISASSVHVHVWQ*MLVAGL
Trigger: CAAACCTGCAACCAGCATCAACTGCCAAACATGTAC...ATGTACTGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGACTGCAACCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CAA 90 bp TCATCCACAAGTGCTGGAATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGCTCTTCAGTACATGTTaGGCAGTTGATGCTGGTTGC +
Preference number: 5 (lower is better)
Translates to: SSTSAGIISASSVHVWQLLFSTC*AVDAGC
Trigger: GCAACCAGCATCAACTGCCAAACATGTACTGAAGAG...CAACTGCCAAACATGTACTGAAGAGGCTGAGATGATTCCAGCACTTGTGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CAA 90 bp ATCATCTCAGCCTCTTCAGTACATGTTTGGCAGTTGATGCTGGTTGCAGGTTTGTTCATTCGGTGTTTATaGGCTCCTGTTCCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: IISASSVHVWQLMLVAGLFIRCL*APVPAV
Trigger: GACAGCTGGAACAGGAGCCAATAAACACCGAATGAA...CAAACCTGCAACCAGCATCAACTGCCAAACATGTACTGAAGAGGCTGAGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS-3UTR CAA 90 bp TTTTGCACTCACATACAAAGGCTGATGGAATTCAAAAATGATCCCACTGATTTTCAGGCCCGTTTGTGGTaGTCTCCGGAGGACTGGAGA +
Preference number: 5 (lower is better)
Translates to: FCTHIQRLMEFKNDPTDFQARLW*SPEDWR
Trigger: TCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTG...AAAATCAGTGGGATCATTTTTGAATTCCATCAGCCTTTGTATGTGAGTGCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp CTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTTGGCAGTGCAGGCCATaGTGGATAATGGAATGGAAG +
Preference number: 5 (lower is better)
Translates to: LAKQCTRFRNFPFYSAKTWQCRP*WIMEWK
Trigger: CTTCCATTCCATTATCCACAATGGCCTGCACTGCCA...AGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp TCAAGGCAGCTTTGTGAGAATGAGAACAGGAGGCGAGCCTATAGCTCAAATCCCCACACCACTGACAGCTaGGACACTTTGTTTTTAAAT +
Preference number: 5 (lower is better)
Translates to: SRQLCENENRRRAYSSNPHTTDS*DTLFLN
Trigger: ATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTG...GGGATTTGAGCTATAGGCTCGCCTCCTGTTCTCATTCTCACAAAGCTGCCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS CCA 90 bp CATAGATTAGGTCTCGTTCTCCTTTGGTCTCATAAAATTTGGCGTTaGCTGGGTCAAAGTACTCAATTTCAAACAGGAAGTCCGGTGCAG +
Preference number: 5 (lower is better)
Translates to: HRLGLVLLWSHKIWR*LGQSTQFQTGSPVQ
Trigger: CTGCACCGGACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAAATTTTATGAGACCAAAGGAGAACGAGACCTAATCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000649807.2
CDS-3UTR CAA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGGTGACCACGAAGTACTaGGGAGGGATGTCTCCCCCT +
Preference number: 5 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLVTTKY*GGMSPP
Trigger: AGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCAC...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCACGCAGCAGCTGGTTATaGGTGACCACGAAGTACTTG +
Preference number: 5 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAARSSWL*VTTKYL
Trigger: CAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCG...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp ACCTGGCTGGACATGAGGCATAGGAGGTACAGAACAAGTTACCATAAGGCACATAGCAGTTTTCTCATCTaGAGTTGCTCATTAAGTCTG +
Preference number: 5 (lower is better)
Translates to: TWLDMRHRRYRTSYHKAHSSFLI*SCSLSL
Trigger: CAGACTTAATGAGCAACTCAAGATGAGAAAACTGCT...ATGTGCCTTATGGTAACTTGTTCTGTACCTCCTATGCCTCATGTCCAGCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp TATGGCTGGGAACATCATCAAAGGCAATGGATACATTTAGGCCATATGAAAATTCCGAACAAGGATGTCTaGTTCAGATGGCAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: YGWEHHQRQWIHLGHMKIPNKDV*FRWQCR
Trigger: CCTGCACTGCCATCTGAACAAGACATCCTTGTTCGG...AATTTTCATATGGCCTAAATGTATCCATTGCCTTTGATGATGTTCCCAGCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp TTTTGCACTCACATACAAAGGCTGATGGAATTCAAAAATGATCCCACTGATTTTGCAGGGCTTTTTCCTTaGGCCCTGGCTGAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: FCTHIQRLMEFKNDPTDFAGLFP*ALAEKP
Trigger: TGGCTTTTCAGCCAGGGCCAAAGGAAAAAGCCCTGC...AAAATCAGTGGGATCATTTTTGAATTCCATCAGCCTTTGTATGTGAGTGCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS CCA 90 bp GAAATGCATAGATTAGGTCTCGTTCTCCTTTGGTCTCATAAAATTTaGCGTTGGCTGGGTCAAAGTACTCAATTTCAAACAGGAAGTCCG +
Preference number: 5 (lower is better)
Translates to: EMHRLGLVLLWSHKI*RWLGQSTQFQTGSP
Trigger: CGGACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAAATTTTATGAGACCAAAGGAGAACGAGACCTAATCTATGCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000649807.2
CDS-3UTR CAA 90 bp TATGGCTGGGAACATCATCAAAGGCAATGGATACATTTAGGCCATATGAAAATTTTCAGGTTAGGTAACTaGCTGGCATCTGCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: YGWEHHQRQWIHLGHMKIFRLGN*LASASR
Trigger: CCTGCTTGCAGATGCCAGCAAGTTACCTAACCTGAA...AATTTTCATATGGCCTAAATGTATCCATTGCCTTTGATGATGTTCCCAGCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp TGGACACTGGCCAAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAGCAGTTTTCTCATCTaGAGTTGCTCATTAAGTCTG +
Preference number: 5 (lower is better)
Translates to: WTLAKQCTRFRNFPFYSASSFLI*SCSLSL
Trigger: CAGACTTAATGAGCAACTCAAGATGAGAAAACTGCT...TGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTTGGCCAGTGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp TTTTGCACTCACATACAAAGGCTGATGGAATTCAAAAATGATCCCACTGATTTTTTCTTGGTTTGGCACTaGACGTCCGGATGGTCAATG +
Preference number: 5 (lower is better)
Translates to: FCTHIQRLMEFKNDPTDFFLVWH*TSGWSM
Trigger: CATTGACCATCCGGACGTCAAGTGCCAAACCAAGAA...AAAATCAGTGGGATCATTTTTGAATTCCATCAGCCTTTGTATGTGAGTGCAAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp AGAGATTGTAAACACACCACTGACAGCTTGGACACTTTGTTTTTAAATGCAGCACTGCGATCTATCTCCTaGGAATCCTTCTTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: RDCKHTTDSLDTLFLNAALRSIS*ESFFLV
Trigger: AACCAAGAAGAAGGATTCCAAGGAGATAGATCGCAG...TGCTGCATTTAAAAACAAAGTGTCCAAGCTGTCAGTGGTGTGTTTACAATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGAGCCCCAGTCAGCTTTaGGATCTTTTCAAACTCTGC +
Preference number: 5 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLSPSQL*DLFKLC
Trigger: GCAGAGTTTGAAAAGATCCAAAAGCTGACTGGGGCT...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp TTTTGCACTCACATACAAAGGCTGATGGAATTCAAAAATGATCCCACTGATTTTAGCCCCAGTCAGCTTTaGGATCTTTTCAAACTCTGC +
Preference number: 5 (lower is better)
Translates to: FCTHIQRLMEFKNDPTDFSPSQL*DLFKLC
Trigger: GCAGAGTTTGAAAAGATCCAAAAGCTGACTGGGGCT...AAAATCAGTGGGATCATTTTTGAATTCCATCAGCCTTTGTATGTGAGTGCAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS-3UTR CAA 90 bp TTTTGCACTCACATACAAAGGCTGATGGAATTCAAAAATGATCCCACTGATTTTCTGCGATCTATCTCCTaGGAATCCTTCTTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: FCTHIQRLMEFKNDPTDFLRSIS*ESFFLV
Trigger: AACCAAGAAGAAGGATTCCAAGGAGATAGATCGCAG...AAAATCAGTGGGATCATTTTTGAATTCCATCAGCCTTTGTATGTGAGTGCAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp AAACAGTGCACTAGGTTTAGAAATTTCCCCTTTTACTCAGCAAAGACTAATTTGCTGCGATCTATCTCCTaGGAATCCTTCTTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: KQCTRFRNFPFYSAKTNLLRSIS*ESFFLV
Trigger: AACCAAGAAGAAGGATTCCAAGGAGATAGATCGCAG...CAAATTAGTCTTTGCTGAGTAAAAGGGGAAATTTCTAAACCTAGTGCACTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS-3UTR CAA 90 bp TATGGCTGGGAACATCATCAAAGGCAATGGATACATTTAGGCCATATGAAAATTAGCAGTTTTCTCATCTaGAGTTGCTCATTAAGTCTG +
Preference number: 5 (lower is better)
Translates to: YGWEHHQRQWIHLGHMKISSFLI*SCSLSL
Trigger: CAGACTTAATGAGCAACTCAAGATGAGAAAACTGCT...AATTTTCATATGGCCTAAATGTATCCATTGCCTTTGATGATGTTCCCAGCCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS TCA 72 bp GTCGCGGCCCGCCGCCTCCCTGGCGGCCGCCCAGCCTaGGGGCTGCATCCCAGGTCACTGCGCGTTGCCGGG +
Preference number: 6 (lower is better)
Translates to: VAARRLPGGRPA*GLHPRSLRVAG
Trigger: CCCGGCAACGCGCAGTGACCTGGGATGCAGCCCTCAGGCTGGGCGGCCGCCAGGGAGGCGGCGGGCCGCGAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS CCA 72 bp GGTCGGCGGCCAGCATGTCGCGGCCCGCCGCCTCCCTaGCGGCCGCCCAGCCTGAGGGCTGCATCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: GRRPACRGPPPP*RPPSLRAASQV
Trigger: GACCTGGGATGCAGCCCTCAGGCTGGGCGGCCGCCAGGGAGGCGGCGGGCCGCGACATGCTGGCCGCCGACC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS CCA 72 bp GTGAGAACGTGCCGACAAGTGTCCTCTGCCGGGGTCTaGGCCGCGGCTCGCCGCCGAAGAGAGAGACCGAGG +
Preference number: 6 (lower is better)
Translates to: VRTCRQVSSAGV*AAARRRRERPR
Trigger: CCTCGGTCTCTCTCTTCGGCGGCGAGCCGCGGCCCAGACCCCGGCAGAGGACACTTGTCGGCACGTTCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS GCA 72 bp GATGACAGGGGTGAGAACGTGCCGACAAGTGTCCTCTaGCGGGGTCTGGGCCGCGGCTCGCCGCCGAAGAGA +
Preference number: 6 (lower is better)
Translates to: DDRGENVPTSVL*RGLGRGSPPKR
Trigger: TCTCTTCGGCGGCGAGCCGCGGCCCAGACCCCGGCAGAGGACACTTGTCGGCACGTTCTCACCCCTGTCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS GCA 72 bp GCCACACAGCTAAGGATGGGGCCGAGGAGGCTGTGCTaGCACCCATGGCCATGGGGGCTGTATATGAGGGCC +
Preference number: 6 (lower is better)
Translates to: ATQLRMGPRRLC*HPWPWGLYMRA
Trigger: GGCCCTCATATACAGCCCCCATGGCCATGGGTGGCAGCACAGCCTCCTCGGCCCCATCCTTAGCTGTGTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000560149.5
ENST00000649807.2
CDS TCA 72 bp GGCTATGACAATGGAATGACAACCGCGGGAACGTGCTaGCACGTGTCCTCCGCGGAGGCCTGGGGCGGGAAG +
Preference number: 6 (lower is better)
Translates to: GYDNGMTTAGTC*HVSSAEAWGGK
Trigger: CTTCCCGCCCCAGGCCTCCGCGGAGGACACGTGTCAGCACGTTCCCGCGGTTGTCATTCCATTGTCATAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS TCA 72 bp GGTTCCCGGCCTAGGGGAAGGGCTATGACAATGGAATaGCAACCGCGGGAACGTGCTGACACGTGTCCTCCG +
Preference number: 6 (lower is better)
Translates to: GSRPRGRAMTME*QPRERADTCPP
Trigger: CGGAGGACACGTGTCAGCACGTTCCCGCGGTTGTCATTCCATTGTCATAGCCCTTCCCCTAGGCCGGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000649807.2
CDS TCA 72 bp GGAGAGCTGGCTCGAAGCCCTCTTGGGTGGCTTCTGTaGATACACCAGGAGGTACTTCACTCGCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: GELARSPLGWLL*IHQEVLHSQQL
Trigger: CAGCTGCTGCGAGTGAAGTACCTCCTGGTGTATTCACAGAAGCCACCCAAGAGGGCTTCGAGCCAGCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000444347.2
ENST00000559805.1
ENST00000560149.5
ENST00000649807.2
CDS CAA 72 bp ACTCTGCCTTCCCTGCACTGTGGATTGTCAGGACCTTaGAGGATAAAATCCAGCTCACCAGGTCCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: TLPSLHCGLSGP*RIKSSSPGPRP
Trigger: GGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCAAAGGTCCTGACAATCCACAGTGCAGGGAAGGCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000649807.2
CDS CAA 72 bp TCTCTGCCTTCCCTGCACTGTGGATTGTCAGGACCTTaGAGGATAAAATCCAGCTCACCAGGTCCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: SLPSLHCGLSGP*RIKSSSPGPRP
Trigger: GGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCAAAGGTCCTGACAATCCACAGTGCAGGGAAGGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560149.5
CDS CCA 72 bp GATAAAATCCAGCTCACCAGGTCCCAGGCCCGTTTGTaGTTGTCTCCGGAGGACTGGAGAAGTTCTTTCAGG +
Preference number: 6 (lower is better)
Translates to: DKIQLTRSQARL*LSPEDWRSSFR
Trigger: CCTGAAAGAACTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000560149.5
ENST00000649807.2
CDS CCA 72 bp GCCCACCCTTTAGATGGCCACACTCTGGCTTTACTCTaGCCACAGACACCTCTTCAGATTCCCAGTGCTATG +
Preference number: 6 (lower is better)
Translates to: AHPLDGHTLALL*PQTPLQIPSAM
Trigger: CATAGCACTGGGAATCTGAAGAGGTGTCTGTGGCCAGAGTAAAGCCAGAGTGTGGCCATCTAAAGGGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559805.1
CDS CAA 72 bp TACACCAGGAGGTACTTCACTCGCAGCAGCTGGTTATaGGTGACCACGAAGTACTTGGGAGGGATGTCTCCC +
Preference number: 6 (lower is better)
Translates to: YTRRYFTRSSWL*VTTKYLGGMSP
Trigger: GGGAGACATCCCTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCGAGTGAAGTACCTCCTGGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000559805.1
ENST00000560149.5
ENST00000649807.2
CDS CAA 90 bp ACAAGGATGTCTCTGCCTTCCCTGCACTGTGGATTGTCAGGACCTTaGAGGATAAAATCCAGCTCACCAGGTCCCAGGCCCGTTTGTGGT +
Preference number: 6 (lower is better)
Translates to: TRMSLPSLHCGLSGP*RIKSSSPGPRPVCG
Trigger: ACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCAAAGGTCCTGACAATCCACAGTGCAGGGAAGGCAGAGACATCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560149.5
CDS GCA 72 bp TGGGTCAAAGTACTCAATTTCAAACAGGAAGTCCGGTaGAGGAACAGGCGTGTGAGGAGCCCCAGTCAGCTT +
Preference number: 6 (lower is better)
Translates to: WVKVLNFKQEVR*RNRRVRSPSQL
Trigger: AAGCTGACTGGGGCTCCTCACACGCCTGTTCCTGCACCGGACTTCCTGTTTGAAATTGAGTACTTTGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000649807.2
CDS GCA 72 bp CGGCGTATCCAGAGCTTGTTCCTTCTGACCTTCAGATaGATTCGGAGTTTCTTCCTTCTGGTGGGTTCGTGG +
Preference number: 6 (lower is better)
Translates to: RRIQSLFLLTFR*IRSFFLLVGSW
Trigger: CCACGAACCCACCAGAAGGAAGAAACTCCGAATGCATCTGAAGGTCAGAAGGAACAAGCTCTGGATACGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558873.1
CDS CCA 72 bp GAATCCTTCTTCTTGGTTTGGCACTTGACGTCCGGATaGTCAATGACCTCACACACGGCCACACAGCTAAGG +
Preference number: 6 (lower is better)
Translates to: ESFFLVWHLTSG*SMTSHTATQLR
Trigger: CCTTAGCTGTGTGGCCGTGTGTGAGGTCATTGACCATCCGGACGTCAAGTGCCAAACCAAGAAGAAGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000560149.5
ENST00000649807.2
CDS CCA 72 bp AGCAGCAGATACAGGGATATCATGACGGTAAACCAATaGCTGGAAAACCAGGAGAGCTGGCTCGAAGCCCTG +
Preference number: 6 (lower is better)
Translates to: SSRYRDIMTVNQ*LENQESWLEAL
Trigger: CAGGGCTTCGAGCCAGCTCTCCTGGTTTTCCAGCCATTGGTTTACCGTCATGATATCCCTGTATCTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261888.10
CDS CCA 72 bp AGCAGCAGATACAGGGATATCATGACGGTAAACCAATaGCTGGAAAACCAGGAGAGCTGGCTCGAAGCCCTC +
Preference number: 6 (lower is better)
Translates to: SSRYRDIMTVNQ*LENQESWLEAL
Trigger: GAGGGCTTCGAGCCAGCTCTCCTGGTTTTCCAGCCATTGGTTTACCGTCATGATATCCCTGTATCTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000444347.2
ENST00000559805.1
ENST00000560149.5
ENST00000649807.2
CDS CCA 72 bp CGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTTGCTaGCTCAGGAATGAAACTACAGACCTTCACGGTGAG +
Preference number: 6 (lower is better)
Translates to: RSFFLLVGSWSC*LRNETTDLHGE
Trigger: CTCACCGTGAAGGTCTGTAGTTTCATTCCTGAGCCAGCAAGACCACGAACCCACCAGAAGGAAGAAACTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558873.1
CDS CAA 72 bp AAAATCCAGCTCACCAGGTCCCAGGCCCGTTTGTGGTaGTCTCCGGAGGACTGGAGAAGTTCTTTCAGGTTA +
Preference number: 6 (lower is better)
Translates to: KIQLTRSQARLW*SPEDWRSSFRL
Trigger: TAACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000560149.5
ENST00000649807.2
CDS CAA 90 bp AGGACCTTTGAGGATAAAATCCAGCTCACCAGGTCCCAGGCCCGTTaGTGGTTGTCTCCGGAGGACTGGAGAAGTTCTTTCAGGTTAGGT +
Preference number: 6 (lower is better)
Translates to: RTFEDKIQLTRSQAR*WLSPEDWRSSFRLG
Trigger: ACCTAACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCAAAGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000560149.5
ENST00000649807.2
CDS CAA 90 bp TCTTTTCAAACTCTGCCTTCCCTGCACTGTGGATTGTCAGGACCTTaGAGGATAAAATCCAGCTCACCAGGTCCCAGGCCCGTTTGTGGT +
Preference number: 6 (lower is better)
Translates to: SFQTLPSLHCGLSGP*RIKSSSPGPRPVCG
Trigger: ACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCAAAGGTCCTGACAATCCACAGTGCAGGGAAGGCAGAGTTTGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000649807.2
CDS CAA 90 bp AGGTACTTCACTCGCAGCAGCTGGTTATTGGTGACCACGAAGTACTaGGGAGGGATGTCTCCCCCTTCACTATGTTTGATTCTCGCTCGT +
Preference number: 6 (lower is better)
Translates to: RYFTRSSWLLVTTKY*GGMSPPSLCLILAR
Trigger: ACGAGCGAGAATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCGAGTGAAGTACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000559805.1
ENST00000560149.5
ENST00000649807.2
CDS CAA 90 bp TTCTGTGAATACACCAGGAGGTACTTCACTCGCAGCAGCTGGTTATaGGTGACCACGAAGTACTTGGGAGGGATGTCTCCCCCTTCACTA +
Preference number: 6 (lower is better)
Translates to: FCEYTRRYFTRSSWL*VTTKYLGGMSPPSL
Trigger: TAGTGAAGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCGAGTGAAGTACCTCCTGGTGTATTCACAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000559805.1
ENST00000560149.5
ENST00000649807.2
CDS CCA 72 bp TGTGAATACACCAGGAGGTACTTCACTCGCAGCAGCTaGTTATTGGTGACCACGAAGTACTTGGGAGGGATG +
Preference number: 6 (lower is better)
Translates to: CEYTRRYFTRSS*LLVTTKYLGGM
Trigger: CATCCCTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCGAGTGAAGTACCTCCTGGTGTATTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000559805.1
ENST00000560149.5
ENST00000649807.2
CDS CAA 90 bp TTTGAGGATAAAATCCAGCTCACCAGGTCCCAGGCCCGTTTGTGGTaGTCTCCGGAGGACTGGAGAAGTTCTTTCAGGTTAGGTAACTTG +
Preference number: 6 (lower is better)
Translates to: FEDKIQLTRSQARLW*SPEDWRSSFRLGNL
Trigger: CAAGTTACCTAACCTGAAAGAACTTCTCCAGTCCTCCGGAGACAACCACAAACGGGCCTGGGACCTGGTGAGCTGGATTTTATCCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000560149.5
ENST00000649807.2
CDS CAA 90 bp GTGACCACGAAGTACTTGGGAGGGATGTCTCCCCCTTCACTATGTTaGATTCTCGCTCGTCTGCGATCTATCTCCTTGGAATCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: VTTKYLGGMSPPSLC*ILARLRSISLESFF
Trigger: GAAGAAGGATTCCAAGGAGATAGATCGCAGACGAGCGAGAATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000560149.5
ENST00000649807.2
CDS GCA 72 bp ATTCGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTTaGTGGCTCAGGAATGAAACTACAGACCTTCACGGT +
Preference number: 6 (lower is better)
Translates to: IRSFFLLVGSWS*WLRNETTDLHG
Trigger: ACCGTGAAGGTCTGTAGTTTCATTCCTGAGCCAGCAAGACCACGAACCCACCAGAAGGAAGAAACTCCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558873.1
CDS CCA 72 bp TCTCCGAACAAGGATGTCTCTGCCTTCCCTGCACTGTaGATTGTCAGGACCTTTGAGGATAAAATCCAGCTC +
Preference number: 6 (lower is better)
Translates to: SPNKDVSAFPAL*IVRTFEDKIQL
Trigger: GAGCTGGATTTTATCCTCAAAGGTCCTGACAATCCACAGTGCAGGGAAGGCAGAGACATCCTTGTTCGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560149.5
CDS CCA 72 bp AAAGCAGCACATCTGGAGTTGTTCCTTCTTCCCAGTTaGTTTCCGGCCTCACTGGCTTCAAGAGCGAAACTA +
Preference number: 6 (lower is better)
Translates to: KAAHLELFLLPS*FPASLASRAKL
Trigger: TAGTTTCGCTCTTGAAGCCAGTGAGGCCGGAAACCAACTGGGAAGAAGGAACAACTCCAGATGTGCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558873.1
CDS CAA 72 bp ACTCGCAGCAGCTGGTTATTGGTGACCACGAAGTACTaGGGAGGGATGTCTCCCCCTTCACTATGTTTGATT +
Preference number: 6 (lower is better)
Translates to: TRSSWLLVTTKY*GGMSPPSLCLI
Trigger: AATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACTTCGTGGTCACCAATAACCAGCTGCTGCGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000559805.1
ENST00000560149.5
ENST00000649807.2
CDS TCA 72 bp AGTACTTGGGAGGGATGTCTCCCCCTTCACTATGTTTaGTTCTCGCTCGTCTGCGATCTATCTCCTTGGAAT +
Preference number: 6 (lower is better)
Translates to: STWEGCLPLHYV*FSLVCDLSPWN
Trigger: ATTCCAAGGAGATAGATCGCAGACGAGCGAGAATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000560149.5
ENST00000649807.2
CDS TCA 72 bp AGGAGGTACAGAACAAGTTACCATAAGGCACATAGTTaGGGTAGCCCCCACACCAGGCCCAGAAAGATTATC +
Preference number: 6 (lower is better)
Translates to: RRYRTSYHKAHS*GSPHTRPRKII
Trigger: GATAATCTTTCTGGGCCTGGTGTGGGGGCTACCTCAACTATGTGCCTTATGGTAACTTGTTCTGTACCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000560149.5
ENST00000649807.2
CDS TCA 72 bp GTTCTTAAAGGCGGCGTATCCAGAGCTTGTTCCTTCTaGCCTTCAGATGCATTCGGAGTTTCTTCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: VLKGGVSRACSF*PSDAFGVSSFW
Trigger: CCAGAAGGAAGAAACTCCGAATGCATCTGAAGGTCAGAAGGAACAAGCTCTGGATACGCCGCCTTTAAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558873.1
CDS CCA 72 bp CACGGTGAGCATTACAACTCTTTAAAGCAGCACATCTaGAGTTGTTCCTTCTTCCCAGTTGGTTTCCGGCCT +
Preference number: 6 (lower is better)
Translates to: HGEHYNSLKQHI*SCSFFPVGFRP
Trigger: AGGCCGGAAACCAACTGGGAAGAAGGAACAACTCCAGATGTGCTGCTTTAAAGAGTTGTAATGCTCACCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558873.1
CDS CCA 72 bp AGATGCATTCGGAGTTTCTTCCTTCTGGTGGGTTCGTaGTCTTGCTGGCTCAGGAATGAAACTACAGACCTT +
Preference number: 6 (lower is better)
Translates to: RCIRSFFLLVGS*SCWLRNETTDL
Trigger: AAGGTCTGTAGTTTCATTCCTGAGCCAGCAAGACCACGAACCCACCAGAAGGAAGAAACTCCGAATGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558873.1
CDS CAA 72 bp AAGTACTTGGGAGGGATGTCTCCCCCTTCACTATGTTaGATTCTCGCTCGTCTGCGATCTATCTCCTTGGAA +
Preference number: 6 (lower is better)
Translates to: KYLGGMSPPSLC*ILARLRSISLE
Trigger: TTCCAAGGAGATAGATCGCAGACGAGCGAGAATCAAACATAGTGAAGGGGGAGACATCCCTCCCAAGTACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000560149.5
ENST00000649807.2
CDS CCA 72 bp GGCCATGCCTACAGACAGCCAAGAATCTATGTAGTCTaGGCTATTTTCCTCAACAATGGTGCCACCTTTAAT +
Preference number: 6 (lower is better)
Translates to: GHAYRQPRIYVV*AIFLNNGATFN
Trigger: ATTAAAGGTGGCACCATTGTTGAGGAAAATAGCCCAGACTACATAGATTCTTGGCTGTCTGTAGGCATGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558873.1
CDS CAA 72 bp AACAAGGATGTCTTGTTCAGATGGCAGTGCAGGCCATaGTGGATAATGGAATGGAAGTTTTCTAGGCGGCTA +
Preference number: 6 (lower is better)
Translates to: NKDVLFRWQCRP*WIMEWKFSRRL
Trigger: TAGCCGCCTAGAAAACTTCCATTCCATTATCCACAATGGCCTGCACTGCCATCTGAACAAGACATCCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261888.10
ENST00000649807.2
CDS CAA 90 bp GATTATCTTTTCGCACGATTCCAAAAGTGTTGGAAAGCAGAGGAGTaGATGACACTCACTATGAGCAGCAGCAGCAGATACAGGGATATC +
Preference number: 6 (lower is better)
Translates to: DYLFARFQKCWKAEE*MTLTMSSSSRYRDI
Trigger: GATATCCCTGTATCTGCTGCTGCTGCTCATAGTGAGTGTCATCAACTCCTCTGCTTTCCAACACTTTTGGAATCGTGCGAAAAGATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261888.10
ENST00000444347.2
ENST00000560149.5
ENST00000649807.2
CDS CCA 72 bp TCGTTCTCCTTTGGTCTCATAAAATTTGGCGTTGGCTaGGTCAAAGTACTCAATTTCAAACAGGAAGTCCGG +
Preference number: 6 (lower is better)
Translates to: SFSFGLIKFGVG*VKVLNFKQEVR
Trigger: CCGGACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAAATTTTATGAGACCAAAGGAGAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000649807.2
CDS CAA 72 bp ACCTTTAATCCCAATGTGTCCAGAATTGGTGGGTTTTaGGTCTCACTAACTTCAAGAACGAAGCCGCAGACT +
Preference number: 6 (lower is better)
Translates to: TFNPNVSRIGGF*VSLTSRTKPQT
Trigger: AGTCTGCGGCTTCGTTCTTGAAGTTAGTGAGACCAAAAACCCACCAATTCTGGACACATTGGGATTAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558873.1
CDS CCA 72 bp GGTCTCGTTCTCCTTTGGTCTCATAAAATTTGGCGTTaGCTGGGTCAAAGTACTCAATTTCAAACAGGAAGT +
Preference number: 6 (lower is better)
Translates to: GLVLLWSHKIWR*LGQSTQFQTGS
Trigger: ACTTCCTGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAAATTTTATGAGACCAAAGGAGAACGAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000649807.2
CDS CCA 72 bp TACCATGAAATGCATAGATTAGGTCTCGTTCTCCTTTaGTCTCATAAAATTTGGCGTTGGCTGGGTCAAAGT +
Preference number: 6 (lower is better)
Translates to: YHEMHRLGLVLL*SHKIWRWLGQS
Trigger: ACTTTGACCCAGCCAACGCCAAATTTTATGAGACCAAAGGAGAACGAGACCTAATCTATGCATTTCATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000649807.2
CDS CCA 72 bp AGATTAGGTCTCGTTCTCCTTTGGTCTCATAAAATTTaGCGTTGGCTGGGTCAAAGTACTCAATTTCAAACA +
Preference number: 6 (lower is better)
Translates to: RLGLVLLWSHKI*RWLGQSTQFQT
Trigger: TGTTTGAAATTGAGTACTTTGACCCAGCCAACGCCAAATTTTATGAGACCAAAGGAGAACGAGACCTAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261888.10
ENST00000558873.1
ENST00000649807.2