Pregenerated sensors for PARD6B (Homo sapiens)
Ensembl gene IDs: ENSG00000124171Ensembl transcript IDs: ENST00000371610.7, ENST00000396039.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATGGTGGGAGGACTGCTTaGGCCCAGGGGATTGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SFITQEKIASWLGAHACNGGRTA*AQGIEA Trigger: AGCCTCAATCCCCTGGGCTCAAGCAGTCCTCCCACC...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATCCAGAAATGCACAACTaGGCGCGGTGGCTCACGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SFITQEKIASWLGAHACNPEMHN*ARWLTP Trigger: AGGCGTGAGCCACCGCGCCCAGTTGTGCATTTCTGG...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATGGCAGGAGAATGGTGTaGACCCAGGAGGTAGAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SFITQEKIASWLGAHACNGRRMV*TQEVEL Trigger: AAGCTCTACCTCCTGGGTTCACACCATTCTCCTGCC...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATGATGGGCGGATCACTTaGGGTCAGGAGTTTGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: SFITQEKIASWLGAHACNDGRIT*GQEFET Trigger: GGTCTCAAACTCCTGACCTCAAGTGATCCGCCCATC...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATAAGCCGAGGCAGGACTaGTTAAGCCCAGGAGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: SFITQEKIASWLGAHACNKPRQD*LSPGVQ Trigger: TTGAACTCCTGGGCTTAAGCAGTCCTGCCTCGGCTT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATGAGACCTTTAAGAGCTaGGGTCCCCAATGTACCACA | + |
|
Preference number: 2 (lower is better) Translates to: SFITQEKIASWLGAHACNETFKS*GPQCTT Trigger: TGTGGTACATTGGGGACCTCAGCTCTTAAAGGTCTC...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR TCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACTTGAACCCGGGAGCTaGGATTGCACCACTGCACTC | + |
|
Preference number: 2 (lower is better) Translates to: FEQLLQSFITQEKIASWLLEPGS*DCTTAL Trigger: GAGTGCAGTGGTGCAATCTCAGCTCCCGGGTTCAAG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACTGAGGCAGGAGAATTaGTTGAACCCGGGAGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: FEQLLQSFITQEKIASWLLRQEN*LNPGAE Trigger: CTCAGCTCCCGGGTTCAAGCAATTCTCCTGCCTCAG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATATGTACAAGTCCTCATaGCATCCTCACTCTGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SFITQEKIASWLGAHACNMYKSS*HPHSEN Trigger: GTTTTCAGAGTGAGGATGCCATGAGGACTTGTACAT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACTTAGAAACCAGAAATaGACAACTGGGCGCGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: FEQLLQSFITQEKIASWLLRNQK*TTGRGG Trigger: GCCACCGCGCCCAGTTGTGCATTTCTGGTTTCTAAG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR TCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTATTGAGGTCAGGAGTTTaGGACCCACCTGACCAACAT | + |
|
Preference number: 2 (lower is better) Translates to: FEQLLQSFITQEKIASWLLRSGV*DPPDQH Trigger: ATGTTGGTCAGGTGGGTCTCAAACTCCTGACCTCAA...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAACGTTACTCGTCTCATaGCTATTCCACGTCACTGGT | + |
|
Preference number: 2 (lower is better) Translates to: FEQLLQSFITQEKIASWLTLLVS*LFHVTG Trigger: ACCAGTGACGTGGAATAGGCATGAGACGAGTAACGT...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR CCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAAGTAGACAGATGTGGTaGTATGTGCCTATGGTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: FEQLLQSFITQEKIASWLSRQMW*YVPMVP Trigger: TGGGACCATAGGCACATACCACCACATCTGTCTACT...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR TCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAATGGCATCCTCACTCTaGAAACATTCAAACCACGGT | + |
|
Preference number: 2 (lower is better) Translates to: FEQLLQSFITQEKIASWLMASSL*KHSNHG Trigger: ACCGTGGTTTGAATGTTTTCAGAGTGAGGATGCCAT...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR CCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACCTATTCCACGTCACTaGTCAGAGGTATATATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: FEQLLQSFITQEKIASWLPIPRH*SEVYML Trigger: AAGCATATATACCTCTGACCAGTGACGTGGAATAGG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR TCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAATGTGCTTTAACATCTaGTTCTCCACAGACAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: FEQLLQSFITQEKIASWLMCFNI*FSTDKT Trigger: TGTTTTGTCTGTGGAGAATCAGATGTTAAAGCACAT...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR TCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAAACAGCCAAGTGGTTTaGTTCTTAGAAACCAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: FEQLLQSFITQEKIASWLNSQVV*FLETRN Trigger: ATTTCTGGTTTCTAAGAATCAAACCACTTGGCTGTT...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR GCA 72 bp | AACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATaGCTGCAATCCAGCACTTTGGGAGGAGATGGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: NSRKDSFLARRS*LQSSTLGGDGR Trigger: CCGCCCATCTCCTCCCAAAGTGCTGGATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATAGGCAGGAGAATTGCTaGAACCCGGGAGCTGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: SFITQEKIASWLGAHACNRQENC*NPGAEI Trigger: AATCTCAGCTCCCGGGTTCAAGCAATTCTCCTGCCT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACTGCAATCCAGCACTTaGGGAGGAGATGGGCGGATC | + |
|
Preference number: 3 (lower is better) Translates to: FEQLLQSFITQEKIASWLLQSST*GGDGRI Trigger: GATCCGCCCATCTCCTCCCAAAGTGCTGGATTGCAG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATAAAGGCCCCTTTGTTTaGGACTTAAATTCACCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SFITQEKIASWLGAHACNKGPFV*DLNSPL Trigger: CAGAGGTGAATTTAAGTCCAAAACAAAGGGGCCTTT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATAAACAGCCAAGTGGTTaGATTCTTAGAAACCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SFITQEKIASWLGAHACNKQPSG*ILRNQK Trigger: TTTCTGGTTTCTAAGAATCAAACCACTTGGCTGTTT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACCGCTGCCCGCCCCGTaGCGGTGGCTGCGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLPLPAP*RWLRFM Trigger: CATGAACCGCAGCCACCGGCACGGGGCGGGCAGCGG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR TCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACTCCGGCGTCCGCGCTaGGCTCCACTCCACCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLLRRPR*APLHQL Trigger: CAGCTGGTGGAGTGGAGCTCAGCGCGGACGCCGGAG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR TCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCTGCGGTTCATGCTaGACGCCGAGCCCCGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLGCGSC*TPSPAT Trigger: CGTCGCGGGGCTCGGCGTTCAGCATGAACCGCAGCC...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACTCCTCACAGGCACCTaGAGAGGGGGCGGCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLLLTGT*RGGGRS Trigger: GCTGCGGCCGCCCCCTCTGCAGGTGCCTGTGAGGAG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACCCGCCCCGTGCCGGTaGCTGCGGTTCATGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLPAPCR*LRFMLN Trigger: GTTCAGCATGAACCGCAGCCACCGGCACGGGGCGGG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACTCCACTCCACCAGCTaGTCACACGGCGGGACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLLHSTS*SHGGTE Trigger: CTCGGTCCCGCCGTGTGAGCAGCTGGTGGAGTGGAG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAATCTCGGAAAGCGGTTaGGGCCCGGGCGCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLISESG*GPGASS Trigger: TGAGGAGGCGCCCGGGCCGCAACCGCTTTCCGAGAT...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATGAAAAGATAGCTTCCTaGCTAGGCGCTCATGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNEKIAS*LGAHAC Trigger: GCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTC...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR TCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATCTGTTATCAGTAGACTaGCCGGAACTGCCAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNLLSVD*PELPEV Trigger: GACTTCTGGCAGTTCCGGTCAGTCTACTGATAACAG...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR TCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGTGGGAGGACTGCTTaGGCCCAGGGGATTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLGGRTA*AQGIEA Trigger: AGCCTCAATCCCCTGGGCTCAAGCAGTCCTCCCACC...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATATTCCGTGTTTGAGCTaGTTGCTATGGCTGCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNIPCLS*LLWLLS Trigger: GCTTAGCAGCCATAGCAAGCAGCTCAAACACGGAAT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGAGCGAGTGCGCGACTaGGGATCTCGGAAAGCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLERVRD*GSRKAV Trigger: AACCGCTTTCCGAGATCCCCAGTCGCGCACTCGCTC...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR TCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACATGTGGTGTTACCCTaGCACTGGAGCCATCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLHVVLP*HWSHPG Trigger: TCCGGGATGGCTCCAGTGTCAGGGTAACACCACATG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR TCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATATGGCATCCTCACTCTaGAAACATTCAAACCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNMASSL*KHSNHG Trigger: ACCGTGGTTTGAATGTTTTCAGAGTGAGGATGCCAT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATACAGCTTTTGGAATCTaGTGTGGCACTCCATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNTAFGI*CGTPLS Trigger: AGACAATGGAGTGCCACAGCAGATTCCAAAAGCTGT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATCCTACGATGCGTTTCTaGGAGAATATCCACGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNPTMRF*ENIHVY Trigger: ATAGACGTGGATATTCTCCCAGAAACGCATCGTAGG...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATATTAGGAACAGCTTTTaGAATCTGCTGTGGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNIRNSF*NLLWHS Trigger: GGAGTGCCACAGCAGATTCCAAAAGCTGTTCCTAAT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATTTGAGCTGCTTGCTATaGCTGCTAAGCTCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNLSCLL*LLSSLH Trigger: ATGAAGTGAGCTTAGCAGCCATAGCAAGCAGCTCAA...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR TCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATCAGTGGATTGGCCGTTaGAACAGCTTTGTGATAATT | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNQWIGR*NSFVII Trigger: AATTATCACAAAGCTGTTTCAACGGCCAATCCACTG...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR TCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATATCAAGGCTCTTCCCTaGAACTTCTATGCCATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNIKALP*NFYAIN Trigger: GTTAATGGCATAGAAGTTTCAGGGAAGAGCCTTGAT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR TCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGATGGGCGGATCACTTaGGGTCAGGAGTTTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLDGRIT*GQEFET Trigger: GGTCTCAAACTCCTGACCTCAAGTGATCCGCCCATC...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACTAGGCGCTCATGCCTaGAATCCAGCACTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLLGAHA*NPALWE Trigger: CTCCCAAAGTGCTGGATTGCAGGCATGAGCGCCTAG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATACAAGCATACCATTGTaGTTGTGCACACTGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNTSIPL*LCTLYN Trigger: ATTGTACAGTGTGCACAAGCACAATGGTATGCTTGT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR TCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATACATTGGGGATCTTATaGACATGTTGTAGTAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNTLGIL*TCCSNP Trigger: TGGATTACTACAACATGTTCATAAGATCCCCAATGT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR TCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATATGTGCTTTAACATCTaGTTCTCCACAGACAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNMCFNI*FSTDKT Trigger: TGTTTTGTCTGTGGAGAATCAGATGTTAAAGCACAT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATAAAGGCACTGTAGTCTaGTTCTTCCTTCTTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNKGTVV*FFLLLY Trigger: ATACAAAAGAAGGAAGAAGCAGACTACAGTGCCTTT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATCAGGACGCAATACGTTaGTTAAAACATTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNQDAIR*LKHSSS Trigger: AGAAGAAGAATGTTTTAACCAACGTATTGCGTCCTG...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR TCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTATTCAAATTCCGTGTTTaGGCTGCTTGCTATGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLFKFRV*AACYGC Trigger: GCAGCCATAGCAAGCAGCTCAAACACGGAATTTGAA...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGTCTCCATGGATGTCTaGATAGCCTACCAAAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLVSMDV*IAYQNV Trigger: GACGTTTTGGTAGGCTATGCAGACATCCATGGAGAC...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAAGACGTACCCTACGATaGGTTTCTGGGAGAATATCC | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLRRTLR*VSGRIS Trigger: GGATATTCTCCCAGAAACGCATCGTAGGGTACGTCT...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATTTTTGGCATAAAAAGTaGACAAGTTTGTCCTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFITQEKIASWLGAHACNFWHKK*TSLSYV Trigger: CACATAGGACAAACTTGTGCACTTTTTATGCCAAAA...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTATTGAGCCAGACCTCCTaGGACAAGCCTGGATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLLSQTS*DKPGYK Trigger: TTTATATCCAGGCTTGTCCCAGGAGGTCTGGCTCAA...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACTAGGGGTTTCTCCGTaGCGTATTTGTAAAGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLLGVSP*RICKDV Trigger: TACGTCTTTACAAATACGGCACGGAGAAACCCCTAG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGAGGTTACGGCTATTTaGAATCATCATGTCTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLEVTAI*NHHVCY Trigger: GTAACAGACATGATGATTGCAAATAGCCGTAACCTC...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR GCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAATTATTCCTCTGGTTTaGCGGTCTCACTGTTATGAT | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLIIPLV*RSHCYD Trigger: ATCATAACAGTGAGACCGGCAAACCAGAGGAATAAT...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CCA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTATTTTGGAATCTGCTGTaGCACTCCATTGTCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FEQLLQSFITQEKIASWLFWNLL*HSIVFN Trigger: ATTGAAGACAATGGAGTGCCACAGCAGATTCCAAAA...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS CCA 90 bp | TCCGGCCGGGCGGCCCCTCAGGAGCGCGGGGAGCGAGTGCGCGACTaGGGATCTCGGAAAGCGGTTGCGGCCCGGGCGCCTCCTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGRAAPQERGERVRD*GSRKAVAARAPPHR Trigger: CCTGTGAGGAGGCGCCCGGGCCGCAACCGCTTTCCGAGATCCCCAGTCGCGCACTCGCTCCCCGCGCTCCTGAGGGGCCGCCCGGCCGGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371610.7 ENST00000396039.1 |
||
| CDS CCA 90 bp | TTCACCTCCATAGTGCCCAGGCAGCCGCTGCCCGCCCCGTGCCGGTaGCTGCGGTTCATGCTGAACGCCGAGCCCCGCGACGGCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FTSIVPRQPLPAPCR*LRFMLNAEPRDGLL Trigger: GAGGAGGCCGTCGCGGGGCTCGGCGTTCAGCATGAACCGCAGCCACCGGCACGGGGCGGGCAGCGGCTGCCTGGGCACTATGGAGGTGAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371610.7 ENST00000396039.1 |
||
| CDS GCA 90 bp | TTGCTCTTCACCTCCATAGTGCCCAGGCAGCCGCTGCCCGCCCCGTaGCGGTGGCTGCGGTTCATGCTGAACGCCGAGCCCCGCGACGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLFTSIVPRQPLPAP*RWLRFMLNAEPRDG Trigger: GCCGTCGCGGGGCTCGGCGTTCAGCATGAACCGCAGCCACCGGCACGGGGCGGGCAGCGGCTGCCTGGGCACTATGGAGGTGAAGAGCAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371610.7 ENST00000396039.1 |
||
| CDS-3UTR CAA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATGATCTCGGAAAGCGGTaGCGGCCCGGGCGCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFITQEKIASWLGAHACNDLGKR*RPGRLL Trigger: GAGGAGGCGCCCGGGCCGCAACCGCTTTCCGAGATC...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATCTGCAATCCAGCACTTaGGGAGGAGATGGGCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SFITQEKIASWLGAHACNLQSST*GGDGRI Trigger: GATCCGCCCATCTCCTCCCAAAGTGCTGGATTGCAG...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATCCGTGTTTGAGCTGCTaGCTATGGCTGCTAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFITQEKIASWLGAHACNPCLSC*LWLLSS Trigger: TGAGCTTAGCAGCCATAGCAAGCAGCTCAAACACGG...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATAATTCAGCTCCAAACTaGCTCTTCACCTCCATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFITQEKIASWLGAHACNNSAPN*LFTSIV Trigger: CACTATGGAGGTGAAGAGCAAGTTTGGAGCTGAATT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS CCA 90 bp | TTTCTCCGTGCCGTATTTGTAAAGACGTACCCTACGATGCGTTTCTaGGAGAATATCCACGTCTATAATAGAAGACACAGGTCTAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FLRAVFVKTYPTMRF*ENIHVYNRRHRSKV Trigger: GACTTTAGACCTGTGTCTTCTATTATAGACGTGGATATTCTCCCAGAAACGCATCGTAGGGTACGTCTTTACAAATACGGCACGGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATCACAGGTCTAAAGTCTaGGGGCATACTAATGACTAT | + |
|
Preference number: 5 (lower is better) Translates to: SFITQEKIASWLGAHACNHRSKV*GHTNDY Trigger: ATAGTCATTAGTATGCCCCAAGACTTTAGACCTGTG...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATTGCTGTGGCACTCCATaGTCTTCAATGATAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFITQEKIASWLGAHACNCCGTP*SSMIMS Trigger: TGACATTATCATTGAAGACAATGGAGTGCCACAGCA...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAAGGCAGGAGAATTGCTaGAACCCGGGAGCTGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: FEQLLQSFITQEKIASWLRQENC*NPGAEI Trigger: AATCTCAGCTCCCGGGTTCAAGCAATTCTCCTGCCT...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | AGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGGCGCTCATGCCTGCAATAGCATACCATTGTGCTaGTGCACACTGTACAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: SFITQEKIASWLGAHACNSIPLC*CTLYNK Trigger: TTTATTGTACAGTGTGCACAAGCACAATGGTATGCT...ATTGCAGGCATGAGCGCCTAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS CCA 90 bp | GTAAGTCTCCATGGATGTCTGCATAGCCTACCAAAACGTCAACATTaGGGATCTTATGAACATGTTGTAGTAATCCATAAAACTCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: VSLHGCLHSLPKRQH*GSYEHVVVIHKTPQ Trigger: TTGAGGAGTTTTATGGATTACTACAACATGTTCATAAGATCCCCAATGTTGACGTTTTGGTAGGCTATGCAGACATCCATGGAGACTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371610.7 ENST00000396039.1 |
||
| CDS-3UTR CAA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAATCCTAAGCAGTGGATaGGCCGTTGAAACAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FEQLLQSFITQEKIASWLILSSG*AVETAL Trigger: CAAAGCTGTTTCAACGGCCAATCCACTGCTTAGGAT...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAGCAGTGGATTGGCCGTaGAAACAGCTTTGTGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: FEQLLQSFITQEKIASWLAVDWP*KQLCDN Trigger: ATTATCACAAAGCTGTTTCAACGGCCAATCCACTGC...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTATTTCAAATTCCGTGTTaGAGCTGCTTGCTATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FEQLLQSFITQEKIASWLFQIPC*SCLLWL Trigger: CAGCCATAGCAAGCAGCTCAAACACGGAATTTGAAA...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAAAAGGCCCCTTTGTTTaGGACTTAAATTCACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FEQLLQSFITQEKIASWLKGPFV*DLNSPL Trigger: CAGAGGTGAATTTAAGTCCAAAACAAAGGGGCCTTT...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTATATACAAGCATACCATaGTGCTTGTGCACACTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FEQLLQSFITQEKIASWLYTSIP*CLCTLY Trigger: GTACAGTGTGCACAAGCACAATGGTATGCTTGTATA...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACAAATTTTCCAGGTTTaGATCTTTCCAGCGAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: FEQLLQSFITQEKIASWLQIFQV*IFPAKT Trigger: GGTTTTCGCTGGAAAGATCAAAACCTGGAAAATTTG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTATCAGGACGCAATACGTaGGTTAAAACATTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FEQLLQSFITQEKIASWLSGRNT*VKTFFF Trigger: GAAGAAGAATGTTTTAACCAACGTATTGCGTCCTGA...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTAAGGACAAACACCAATTaGAACAACTGTTGCAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FEQLLQSFITQEKIASWLRTNTN*NNCCKV Trigger: AACTTTGCAACAGTTGTTCAAATTGGTGTTTGTCCT...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS-3UTR CAA 90 bp | TTTGAACAACTGTTGCAAAGTTTCATAACTCAAGAAAAGATAGCTTCCTGGCTACAAAATGATGCATACTaGGATGCATTAAAAGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: FEQLLQSFITQEKIASWLQNDAY*DALKAH Trigger: GTGTGCTTTTAATGCATCCAAGTATGCATCATTTTG...TAGCCAGGAAGCTATCTTTTCTTGAGTTATGAAACTTTGCAACAGTTGTTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS TCA 72 bp | CGCTGCCCGCCCCGTGCCGGTGGCTGCGGTTCATGCTaGACGCCGAGCCCCGCGACGGCCTCCTCCGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RCPPRAGGCGSC*TPSPATASSGR Trigger: CCGGCCGGAGGAGGCCGTCGCGGGGCTCGGCGTTCAGCATGAACCGCAGCCACCGGCACGGGGCGGGCAGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000371610.7 ENST00000396039.1 |
||
| CDS CCA 72 bp | GCCGTATTTGTAAAGACGTACCCTACGATGCGTTTCTaGGAGAATATCCACGTCTATAATAGAAGACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVFVKTYPTMRF*ENIHVYNRRHR Trigger: CCTGTGTCTTCTATTATAGACGTGGATATTCTCCCAGAAACGCATCGTAGGGTACGTCTTTACAAATACGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||
| CDS CAA 72 bp | TTAGGAACAGCTTTTGGAATCTGCTGTGGCACTCCATaGTCTTCAATGATAATGTCATCTTCTTCGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGTAFGICCGTP*SSMIMSSSSLS Trigger: AGACAGCGAAGAAGATGACATTATCATTGAAGACAATGGAGTGCCACAGCAGATTCCAAAAGCTGTTCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371610.7 |
||