RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAQR4 (Homo sapiens)

Ensembl gene IDs: ENSG00000162073

Ensembl transcript IDs: ENST00000293978.12, ENST00000318782.9, ENST00000572687.1, ENST00000574988.1, ENST00000576565.1

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCAGAACCCAGCGCTCCTGGCCTTGGGCCAGCAGCTGAAGCCCCATaGTGTGTGGAGCAAAGAGGTTTCCTGAGCAGGCACATCCCCCGG +
Preference number: 1 (lower is better)
Translates to: AEPSAPGLGPAAEAP*CVEQRGFLSRHIPR
Trigger: CCGGGGGATGTGCCTGCTCAGGAAACCTCTTTGCTCCACACAGCATGGGGCTTCAGCTGCTGGCCCAAGGCCAGGAGCGCTGGGTTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 90 bp TGGCCACAGGCCTGGTGGGAGGAACAGGATAGGGTGAGGAGGCTCTaGGCTGGCGGCCTGGCAGGACTTGAACTCTCAGAGCAAGACGTG +
Preference number: 1 (lower is better)
Translates to: WPQAWWEEQDRVRRL*AGGLAGLELSEQDV
Trigger: CACGTCTTGCTCTGAGAGTTCAAGTCCTGCCAGGCCGCCAGCCCAGAGCCTCCTCACCCTATCCTGTTCCTCCCACCAGGCCTGTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 90 bp GCCTGTTTGTCAGGCGGGAGCCTGGAGCCTGCACAGGGACAGAGCTaGTTTCATCCGGCACTCCCTAGCCCTGGACACCCTCCTTGTCTC +
Preference number: 1 (lower is better)
Translates to: ACLSGGSLEPAQGQS*FHPALPSPGHPPCL
Trigger: GAGACAAGGAGGGTGTCCAGGGCTAGGGAGTGCCGGATGAAACCAGCTCTGTCCCTGTGCAGGCTCCAGGCTCCCGCCTGACAAACAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR GCA 90 bp GAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCTTGTaGCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTC +
Preference number: 1 (lower is better)
Translates to: ELPVSVSWKKQLQPL*LWPAGTRRVHAPLV
Trigger: GACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR GCA 90 bp CTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTaGAGCCCTTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACG +
Preference number: 1 (lower is better)
Translates to: LRPLSSLCQFPGRSS*SPCACGQLVQDGST
Trigger: CGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 90 bp GGAGCAAAGAGGTTTCCTGAGCAGGCACATCCCCCGGTGGGTACCTaGAGCTGTTGGGAGTATGGCACTCAAGGTGGAGGGCAGGCACGG +
Preference number: 1 (lower is better)
Translates to: GAKRFPEQAHPPVGT*SCWEYGTQGGGQAR
Trigger: CCGTGCCTGCCCTCCACCTTGAGTGCCATACTCCCAACAGCTCCAGGTACCCACCGGGGGATGTGCCTGCTCAGGAAACCTCTTTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR TCA 90 bp CCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTTGTCCTaGATGCCTTACTCCATAGTCTCTGGGCAGAGGGAGCCAGGGCGG +
Preference number: 1 (lower is better)
Translates to: PAGTRRVHAPLVLLS*MPYSIVSGQREPGR
Trigger: CCGCCCTGGCTCCCTCTGCCCAGAGACTATGGAGTAAGGCATTCAGGACAAAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR TCA 90 bp GGCCAGCAGCTGAAGCCCCATGCTGTGTGGAGCAAAGAGGTTTCCTaGGCAGGCACATCCCCCGGTGGGTACCTGGAGCTGTTGGGAGTA +
Preference number: 1 (lower is better)
Translates to: GQQLKPHAVWSKEVS*AGTSPGGYLELLGV
Trigger: TACTCCCAACAGCTCCAGGTACCCACCGGGGGATGTGCCTGCTCAGGAAACCTCTTTGCTCCACACAGCATGGGGCTTCAGCTGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 90 bp TGGAGGGAAAAGGCAGGGAAGGAAGTTGGAGCGCCACGGCGTGGGTaGAAGAGGTCAGTCCACAGGGAAGAACGGGTGAACAGGGCTCCT +
Preference number: 1 (lower is better)
Translates to: WREKAGKEVGAPRRG*KRSVHREERVNRAP
Trigger: AGGAGCCCTGTTCACCCGTTCTTCCCTGTGGACTGACCTCTTCCACCCACGCCGTGGCGCTCCAACTTCCTTCCCTGCCTTTTCCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 90 bp GCAAGCTTGTGGCTGCTGGGAGGGCTGGTATGCAGGGCAGAAAGATaGAGATCAGGAAGACTGGCCACAGGCCTGGTGGGAGGAACAGGA +
Preference number: 1 (lower is better)
Translates to: ASLWLLGGLVCRAER*RSGRLATGLVGGTG
Trigger: TCCTGTTCCTCCCACCAGGCCTGTGGCCAGTCTTCCTGATCTCCATCTTTCTGCCCTGCATACCAGCCCTCCCAGCAGCCACAAGCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 90 bp TACTCCATAGTCTCTGGGCAGAGGGAGCCAGGGCGGGCAAGCTTGTaGCTGCTGGGAGGGCTGGTATGCAGGGCAGAAAGATGGAGATCA +
Preference number: 1 (lower is better)
Translates to: YSIVSGQREPGRASL*LLGGLVCRAERWRS
Trigger: TGATCTCCATCTTTCTGCCCTGCATACCAGCCCTCCCAGCAGCCACAAGCTTGCCCGCCCTGGCTCCCTCTGCCCAGAGACTATGGAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 90 bp CCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCTTGTGCCTGTaGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTTG +
Preference number: 1 (lower is better)
Translates to: PVSVSWKKQLQPLCL*PAGTRRVHAPLVLL
Trigger: CAAAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 90 bp TGCTGTGTGGAGCAAAGAGGTTTCCTGAGCAGGCACATCCCCCGGTaGGTACCTGGAGCTGTTGGGAGTATGGCACTCAAGGTGGAGGGC +
Preference number: 1 (lower is better)
Translates to: CCVEQRGFLSRHIPR*VPGAVGSMALKVEG
Trigger: GCCCTCCACCTTGAGTGCCATACTCCCAACAGCTCCAGGTACCCACCGGGGGATGTGCCTGCTCAGGAAACCTCTTTGCTCCACACAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 90 bp AGTTTCCTGGAAGAAGCAGCTGCAGCCCTTGTGCCTGTGGCCAGCTaGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTTGTCCTGAAT +
Preference number: 1 (lower is better)
Translates to: SFLEEAAAALVPVAS*YKTGPRPLGPFVLN
Trigger: ATTCAGGACAAAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGGGCTGCAGCTGCTTCTTCCAGGAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR GCA 90 bp CTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTaGCTGTTTGTCAGGCGGGAGCCTGGAGCCTGCACAGGGACAGAG +
Preference number: 1 (lower is better)
Translates to: LSECTKFLLSLTVAP*LFVRREPGACTGTE
Trigger: CTCTGTCCCTGTGCAGGCTCCAGGCTCCCGCCTGACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR TCA 90 bp CTGTCCAAGTGCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTaGCTGTGGCTCCCTGCCTGTTTGTCAGGCGGGAGCCTGGAGCCT +
Preference number: 1 (lower is better)
Translates to: LSKCCFQSAPSFYCP*LWLPACLSGGSLEP
Trigger: AGGCTCCAGGCTCCCGCCTGACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGCACTTGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR TCA 90 bp ACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTaGACCTTGGGAGCACCCAAGCTTGCTCATGTGGCAACATGGCCC +
Preference number: 1 (lower is better)
Translates to: TPMVFSAWPCLIKSI*TLGAPKLAHVATWP
Trigger: GGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTCCCAAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR GCA 90 bp GCCGTGTCTAATAAAAAGTATTTGAACCTTGGGAGCACCCAAGCTTaGTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCA +
Preference number: 1 (lower is better)
Translates to: AVSNKKYLNLGSTQA*SCGNMALPVPLLMS
Trigger: TGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTCCCAAGGTTCAAATACTTTTTATTAGACACGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR TCA 90 bp TTTACTAAAAGTTTATTTCAAATCTGCCTCCAAGTCCATGTGTTCTaGAAAGGACAGAGGGGGCCTTGGAGTGCAGCCAGATGGAAGGAC +
Preference number: 1 (lower is better)
Translates to: FTKSLFQICLQVHVF*KGQRGPWSAARWKD
Trigger: GTCCTTCCATCTGGCTGCACTCCAAGGCCCCCTCTGTCCTTTTCAGAACACATGGACTTGGAGGCAGATTTGAAATAAACTTTTAGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp CCTTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTGGGCGGGCAAGCTTGTaGCTGCTGGGAGGGCTGGTA +
Preference number: 2 (lower is better)
Translates to: PCACGQLVQDGSTPPWSFGRASL*LLGGLV
Trigger: TACCAGCCCTCCCAGCAGCCACAAGCTTGCCCGCCC...AAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp CCTTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTTGGAGCGCCACGGCGTaGGTGGAAGAGGTCAGTCCA +
Preference number: 2 (lower is better)
Translates to: PCACGQLVQDGSTPPWSFWSATA*VEEVSP
Trigger: TGGACTGACCTCTTCCACCCACGCCGTGGCGCTCCA...AAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp GGATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGAGGGTGAGGAGGCTCTaGGCTGGCGGCCTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: GSEAAELPVSVSWKKQLQRVRRL*AGGLAG
Trigger: TCCTGCCAGGCCGCCAGCCCAGAGCCTCCTCACCCT...CTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CAA 90 bp CCTTACTCCATAGTCTCTGGGCAGAGGGAGCCAGGGCGGGCAAGCTaGTGGCTGCTGGGAGGGCTGGTATGCAGGGCAGAAAGATGGAGA +
Preference number: 2 (lower is better)
Translates to: PYSIVSGQREPGRAS*WLLGGLVCRAERWR
Trigger: TCTCCATCTTTCTGCCCTGCATACCAGCCCTCCCAGCAGCCACAAGCTTGCCCGCCCTGGCTCCCTCTGCCCAGAGACTATGGAGTAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR TCA 90 bp GATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCAGGAACAGGATAGGGTaGGGAGGCTCTGGGCTGGCG +
Preference number: 2 (lower is better)
Translates to: DLRPLSSLCQFPGRSSCSRNRIG*GGSGLA
Trigger: CGCCAGCCCAGAGCCTCCTCACCCTATCCTGTTCCT...GCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR GCA 90 bp CCTTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTAAGGAGCCAGCCCCTTaGAGACGAGTTGGGAGGAAC +
Preference number: 2 (lower is better)
Translates to: PCACGQLVQDGSTPPWSFKEPAP*RRVGRN
Trigger: GTTCCTCCCAACTCGTCTGCAAGGGGCTGGCTCCTT...AAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp TCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCCAAGCTTGTGGCTGCTaGGAGGGCTGGTATGCAGGG +
Preference number: 2 (lower is better)
Translates to: SEAAELPVSVSWKKQLQPQACGC*EGWYAG
Trigger: CCCTGCATACCAGCCCTCCCAGCAGCCACAAGCTTG...GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp CCAGAGTCCCTCTCTGGTCTAACCCCACAGGTCACAGAGGGTAAAGAGGTCCCATGGAGCGCCACGGCGTaGGTGGAAGAGGTCAGTCCA +
Preference number: 2 (lower is better)
Translates to: PESLSGLTPQVTEGKEVPWSATA*VEEVSP
Trigger: TGGACTGACCTCTTCCACCCACGCCGTGGCGCTCCA...TGGGACCTCTTTACCCTCTGTGACCTGTGGGGTTAGACCAGAGAGGGACTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp GGATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGGGAGATCAGGAAGACTaGCCACAGGCCTGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: GSEAAELPVSVSWKKQLQGDQED*PQAWWE
Trigger: CTCCCACCAGGCCTGTGGCCAGTCTTCCTGATCTCC...CTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp TCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCTTACTCCATAGTCTCTaGGCAGAGGGAGCCAGGGCG +
Preference number: 2 (lower is better)
Translates to: SEAAELPVSVSWKKQLQPLLHSL*AEGARA
Trigger: CGCCCTGGCTCCCTCTGCCCAGAGACTATGGAGTAA...GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp TCCTTCCCCTCCTTTGAGCCTCGGAACCTCCTCAGCCTGTTTGAGGACACCCTAGTGCCTGTGGCCAGCTaGTACAAGACGGGTCCACGC +
Preference number: 2 (lower is better)
Translates to: SFPSFEPRNLLSLFEDTLVPVAS*YKTGPR
Trigger: GCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCAC...TAGGGTGTCCTCAAACAGGCTGAGGAGGTTCCGAGGCTCAAAGGAGGGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR GCA 90 bp GGATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCTAACTCTAGGAGGCTaGTGTGGGCAGGCTGGCATG +
Preference number: 2 (lower is better)
Translates to: GSEAAELPVSVSWKKQLQLTLGG*CGQAGM
Trigger: CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAG...CTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp TCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCCCCTTGCAGACGAGTTaGGAGGAACACCTGGTGTTG +
Preference number: 2 (lower is better)
Translates to: SEAAELPVSVSWKKQLQPPLQTS*EEHLVL
Trigger: CAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG...GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp TCCTTCCCCTCCTTTGAGCCTCGGAACCTCCTCAGCCTGTTTGAGGACACCCTACAAGCTTGTGGCTGCTaGGAGGGCTGGTATGCAGGG +
Preference number: 2 (lower is better)
Translates to: SFPSFEPRNLLSLFEDTLQACGC*EGWYAG
Trigger: CCCTGCATACCAGCCCTCCCAGCAGCCACAAGCTTG...TAGGGTGTCCTCAAACAGGCTGAGGAGGTTCCGAGGCTCAAAGGAGGGGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CAA 90 bp CTCATGAGCTGGAAGCATCCAAGGAGCCAGCCCCTTGCAGACGAGTaGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: LMSWKHPRSQPLADE*GGTPGVANSRRLLW
Trigger: CCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGCTCCTTGGATGCTTCCAGCTCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR TCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAACCTTGGGCCAGCAGCTaGAGCCCCATGCTGTGTGGA +
Preference number: 2 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAEPWASS*SPMLCG
Trigger: TCCACACAGCATGGGGCTTCAGCTGCTGGCCCAAGG...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR GCA 90 bp TCCTTCCCCTCCTTTGAGCCTCGGAACCTCCTCAGCCTGTTTGAGGACACCCTACTAACTCTAGGAGGCTaGTGTGGGCAGGCTGGCATG +
Preference number: 2 (lower is better)
Translates to: SFPSFEPRNLLSLFEDTLLTLGG*CGQAGM
Trigger: CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAG...TAGGGTGTCCTCAAACAGGCTGAGGAGGTTCCGAGGCTCAAAGGAGGGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR GCA 90 bp GAACTCTCAGAGCAAGACGTGACCCCAGAGTCCCTCTCTGGTCTAACCCCACAGAAGGAGCCAGCCCCTTaGAGACGAGTTGGGAGGAAC +
Preference number: 2 (lower is better)
Translates to: ELSEQDVTPESLSGLTPQKEPAP*RRVGRN
Trigger: GTTCCTCCCAACTCGTCTGCAAGGGGCTGGCTCCTT...CTGTGGGGTTAGACCAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR GCA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTCCTGAGGCTGAGCCCTaGTGCAGAACCCAGCGCTCC +
Preference number: 2 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPPEAEP*CRTQRS
Trigger: GGAGCGCTGGGTTCTGCAGCAGGGCTCAGCCTCAGG...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAAGTATGGCACTCAAGGTaGAGGGCAGGCACGGCCCAG +
Preference number: 2 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAEVWHSR*RAGTAQ
Trigger: CTGGGCCGTGCCTGCCCTCCACCTTGAGTGCCATAC...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAATGGCCACAGGCCTGGTaGGAGGAACAGGATAGGGTG +
Preference number: 2 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAEWPQAW*EEQDRV
Trigger: CACCCTATCCTGTTCCTCCCACCAGGCCTGTGGCCA...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGTATGGCACTCAAGGTaGAGGGCAGGCACGGCCCAG +
Preference number: 2 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPVWHSR*RAGTAQ
Trigger: CTGGGCCGTGCCTGCCCTCCACCTTGAGTGCCATAC...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CAA 90 bp ACCCAAGCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATaGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: TQACSCGNMALPVPL*MSSRVLTPLRLSPA
Trigger: AGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR GCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAACTAACTCTAGGAGGCTaGTGTGGGCAGGCTGGCATG +
Preference number: 2 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAELTLGG*CGQAGM
Trigger: CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAG...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR GCA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGCAGCTGCAGCCCTTGTaGCTGTGGCCAGCTGGTACA +
Preference number: 2 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRQLQPL*LWPAGT
Trigger: TGTACCAGCTGGCCACAGGCACAAGGGCTGCAGCTG...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR GCA 90 bp GAGCACCCAAGCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATCCTGGAAGAAGCAGCTaGAGCCCTTGTGCCTGTGGC +
Preference number: 2 (lower is better)
Translates to: EHPSLLMWQHGPSCPFIDPGRSS*SPCACG
Trigger: GCCACAGGCACAAGGGCTGCAGCTGCTTCTTCCAGG...ATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp TTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGTTTGTGGCAGGGAAGGAAGTTaGAGCGCCACGGCGTGGGTG +
Preference number: 2 (lower is better)
Translates to: FRVHQVFIVPDCGSLPVCGREGS*SATAWV
Trigger: CACCCACGCCGTGGCGCTCCAACTTCCTTCCCTGCC...ACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp GAGCACCCAAGCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATTGGCCACAGGCCTGGTaGGAGGAACAGGATAGGGTG +
Preference number: 2 (lower is better)
Translates to: EHPSLLMWQHGPSCPFIDWPQAW*EEQDRV
Trigger: CACCCTATCCTGTTCCTCCCACCAGGCCTGTGGCCA...ATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp TTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGTTTGTGTCGCCCTTGAAAGCTaGGGCCCCTCGGGAACTCCC +
Preference number: 2 (lower is better)
Translates to: FRVHQVFIVPDCGSLPVCVALES*GPSGTP
Trigger: GGGAGTTCCCGAGGGGCCCCAGCTTTCAAGGGCGAC...ACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR TCA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTTCTCAGAGCAAGACGTaGCCCCAGAGTCCCTCTCTG +
Preference number: 2 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPSQSKT*PQSPSL
Trigger: CAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGA...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp TCCTTCCCCTCCTTTGAGCCTCGGAACCTCCTCAGCCTGTTTGAGGACACCCTAGCTCATGTGGCAACATaGCCCTTCCTGTCCCTTTAT +
Preference number: 2 (lower is better)
Translates to: SFPSFEPRNLLSLFEDTLAHVAT*PFLSLY
Trigger: ATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGC...TAGGGTGTCCTCAAACAGGCTGAGGAGGTTCCGAGGCTCAAAGGAGGGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CAA 90 bp TTGAAGGCTGTCCAAGTGCTGCTTTCAGAGTGCACCAAGTTTTTATaGTCCCTGACTGTGGCTCCCTGCCTGTTTGTCAGGCGGGAGCCT +
Preference number: 2 (lower is better)
Translates to: LKAVQVLLSECTKFL*SLTVAPCLFVRREP
Trigger: AGGCTCCCGCCTGACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGCACTTGGACAGCCTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR GCA 90 bp GAGCACCCAAGCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGCAGCTGAAGCCCCATaGTGTGTGGAGCAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: EHPSLLMWQHGPSCPFIDAAEAP*CVEQRG
Trigger: ACCTCTTTGCTCCACACAGCATGGGGCTTCAGCTGC...ATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR GCA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGCAGCTGAAGCCCCATaGTGTGTGGAGCAAAGAGGT +
Preference number: 2 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPAAEAP*CVEQRG
Trigger: ACCTCTTTGCTCCACACAGCATGGGGCTTCAGCTGC...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTGCGCCACGGCGTGGGTaGAAGAGGTCAGTCCACAGG +
Preference number: 2 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLAPRRG*KRSVHR
Trigger: CCTGTGGACTGACCTCTTCCACCCACGCCGTGGCGC...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp CCAGAGTCCCTCTCTGGTCTAACCCCACAGGTCACAGAGGGTAAAGAGGTCCCAAGTAAAATAGGAGCTTaGAGGGAAAAGGCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: PESLSGLTPQVTEGKEVPSKIGA*REKAGK
Trigger: CTTCCCTGCCTTTTCCCTCCAAGCTCCTATTTTACT...TGGGACCTCTTTACCCTCTGTGACCTGTGGGGTTAGACCAGAGAGGGACTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp GAGCACCCAAGCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGGTACCTGGAGCTGTTaGGAGTATGGCACTCAAGGT +
Preference number: 2 (lower is better)
Translates to: EHPSLLMWQHGPSCPFIDGTWSC*EYGTQG
Trigger: ACCTTGAGTGCCATACTCCCAACAGCTCCAGGTACC...ATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp TTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGTTTGTCCTGTGTCAGTTTCCTaGAAGAAGCAGCTGCAGCCC +
Preference number: 2 (lower is better)
Translates to: FRVHQVFIVPDCGSLPVCPVSVS*KKQLQP
Trigger: GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGG...ACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAAAGTAAAATAGGAGCTTaGAGGGAAAAGGCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAESKIGA*REKAGK
Trigger: CTTCCCTGCCTTTTCCCTCCAAGCTCCTATTTTACT...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR TCA 90 bp GAGCACCCAAGCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATTTGGTCCTTTTGTCCTaGATGCCTTACTCCATAGTC +
Preference number: 2 (lower is better)
Translates to: EHPSLLMWQHGPSCPFIDLVLLS*MPYSIV
Trigger: GACTATGGAGTAAGGCATTCAGGACAAAAGGACCAA...ATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CCA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTGGTACCTGGAGCTGTTaGGAGTATGGCACTCAAGGT +
Preference number: 2 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLGTWSC*EYGTQG
Trigger: ACCTTGAGTGCCATACTCCCAACAGCTCCAGGTACC...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR TCA 72 bp GTCTCGCCTGCCCTCCTGCAGGCCTTCACTCTCCCCTaGGGCTGTCCTGGCCCGGACTGTGGGGAGCACCTC +
Preference number: 3 (lower is better)
Translates to: VSPALLQAFTLP*GCPGPDCGEHL
Trigger: GAGGTGCTCCCCACAGTCCGGGCCAGGACAGCCTCAGGGGAGAGTGAAGGCCTGCAGGAGGGCAGGCGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR GCA 72 bp ATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTaGAGAACCCAGCGCTCCTGGCCTTGGGCCAGCAGC +
Preference number: 3 (lower is better)
Translates to: IQGLNAPEAEPC*RTQRSWPWASS
Trigger: GCTGCTGGCCCAAGGCCAGGAGCGCTGGGTTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR GCA 72 bp GTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTaGTGCAGAACCCAGCGCTCCTGGCCTTGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: VIQGLNAPEAEP*CRTQRSWPWAS
Trigger: GCTGGCCCAAGGCCAGGAGCGCTGGGTTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR GCA 72 bp GCTCCCTGCCTGTTTGTCAGGCGGGAGCCTGGAGCCTaGACAGGGACAGAGCTGGTTTCATCCGGCACTCCC +
Preference number: 3 (lower is better)
Translates to: APCLFVRREPGA*TGTELVSSGTP
Trigger: GGGAGTGCCGGATGAAACCAGCTCTGTCCCTGTGCAGGCTCCAGGCTCCCGCCTGACAAACAGGCAGGGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 72 bp GAGCAGGCACATCCCCCGGTGGGTACCTGGAGCTGTTaGGAGTATGGCACTCAAGGTGGAGGGCAGGCACGG +
Preference number: 3 (lower is better)
Translates to: EQAHPPVGTWSC*EYGTQGGGQAR
Trigger: CCGTGCCTGCCCTCCACCTTGAGTGCCATACTCCCAACAGCTCCAGGTACCCACCGGGGGATGTGCCTGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 72 bp GGCAGAGGGAGCCAGGGCGGGCAAGCTTGTGGCTGCTaGGAGGGCTGGTATGCAGGGCAGAAAGATGGAGAT +
Preference number: 3 (lower is better)
Translates to: GRGSQGGQACGC*EGWYAGQKDGD
Trigger: ATCTCCATCTTTCTGCCCTGCATACCAGCCCTCCCAGCAGCCACAAGCTTGCCCGCCCTGGCTCCCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR GCA 72 bp AGCGCTCCTGGCCTTGGGCCAGCAGCTGAAGCCCCATaGTGTGTGGAGCAAAGAGGTTTCCTGAGCAGGCAC +
Preference number: 3 (lower is better)
Translates to: SAPGLGPAAEAP*CVEQRGFLSRH
Trigger: GTGCCTGCTCAGGAAACCTCTTTGCTCCACACAGCATGGGGCTTCAGCTGCTGGCCCAAGGCCAGGAGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CAA 90 bp GAACTCTCAGAGCAAGACGTGACCCCAGAGTCCCTCTCTGGTCTAACCCCACAGAGGCAGGGAAGGAAGTaGGAGCGCCACGGCGTGGGT +
Preference number: 3 (lower is better)
Translates to: ELSEQDVTPESLSGLTPQRQGRK*ERHGVG
Trigger: ACCCACGCCGTGGCGCTCCAACTTCCTTCCCTGCCT...CTGTGGGGTTAGACCAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CAA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAACCAGGGCGGGCAAGCTaGTGGCTGCTGGGAGGGCTG +
Preference number: 3 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAEPGRAS*WLLGGL
Trigger: CAGCCCTCCCAGCAGCCACAAGCTTGCCCGCCCTGG...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR TCA 72 bp CTGAAGCCCCATGCTGTGTGGAGCAAAGAGGTTTCCTaGGCAGGCACATCCCCCGGTGGGTACCTGGAGCTG +
Preference number: 3 (lower is better)
Translates to: LKPHAVWSKEVS*AGTSPGGYLEL
Trigger: CAGCTCCAGGTACCCACCGGGGGATGTGCCTGCTCAGGAAACCTCTTTGCTCCACACAGCATGGGGCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR GCA 72 bp GTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCTTGTaGCTGTGGCCAGCTGGTACAAGACGGGTCCACGCC +
Preference number: 3 (lower is better)
Translates to: VSVSWKKQLQPL*LWPAGTRRVHA
Trigger: GGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGGGCTGCAGCTGCTTCTTCCAGGAAACTGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 72 bp AGGTTTCCTGAGCAGGCACATCCCCCGGTGGGTACCTaGAGCTGTTGGGAGTATGGCACTCAAGGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: RFPEQAHPPVGT*SCWEYGTQGGG
Trigger: CCCTCCACCTTGAGTGCCATACTCCCAACAGCTCCAGGTACCCACCGGGGGATGTGCCTGCTCAGGAAACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CAA 90 bp TTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTTGCCCCTTGCAGACGAGTaGGGAGGAACACCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: LCLWPAGTRRVHAPLVLLPLADE*GGTPGV
Trigger: AACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG...CAAAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CAA 90 bp GATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCGAGGAACACCTGGTGTaGCTAACTCTAGGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: DLRPLSSLCQFPGRSSCSEEHLV*LTLGGC
Trigger: GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC...GCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CAA 90 bp TCCTTCCCCTCCTTTGAGCCTCGGAACCTCCTCAGCCTGTTTGAGGACACCCTACCCCTTGCAGACGAGTaGGGAGGAACACCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: SFPSFEPRNLLSLFEDTLPLADE*GGTPGV
Trigger: AACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG...TAGGGTGTCCTCAAACAGGCTGAGGAGGTTCCGAGGCTCAAAGGAGGGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR GCA 72 bp CTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTaGAGCCCTTGTGCCTGTGGCCAGCTGGTACAAGAC +
Preference number: 3 (lower is better)
Translates to: LSSLCQFPGRSS*SPCACGQLVQD
Trigger: GTCTTGTACCAGCTGGCCACAGGCACAAGGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 72 bp GGAAGCATCCAAGGAGCCAGCCCCTTGCAGACGAGTTaGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGC +
Preference number: 3 (lower is better)
Translates to: GSIQGASPLQTS*EEHLVLLTLGG
Trigger: GCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGCTCCTTGGATGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 72 bp GAGCAAAGAGGTTTCCTGAGCAGGCACATCCCCCGGTaGGTACCTGGAGCTGTTGGGAGTATGGCACTCAAG +
Preference number: 3 (lower is better)
Translates to: EQRGFLSRHIPR*VPGAVGSMALK
Trigger: CTTGAGTGCCATACTCCCAACAGCTCCAGGTACCCACCGGGGGATGTGCCTGCTCAGGAAACCTCTTTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR TCA 72 bp ACAAGACGGGTCCACGCCCCCTTGGTCCTTTTGTCCTaGATGCCTTACTCCATAGTCTCTGGGCAGAGGGAG +
Preference number: 3 (lower is better)
Translates to: TRRVHAPLVLLS*MPYSIVSGQRE
Trigger: CTCCCTCTGCCCAGAGACTATGGAGTAAGGCATTCAGGACAAAAGGACCAAGGGGGCGTGGACCCGTCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CAA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAACCCCTTGCAGACGAGTaGGGAGGAACACCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAEPLADE*GGTPGV
Trigger: AACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CAA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGGGGTACCTGGAGCTGTaGGGAGTATGGCACTCAAGG +
Preference number: 3 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRGYLEL*GVWHSR
Trigger: CCTTGAGTGCCATACTCCCAACAGCTCCAGGTACCC...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CAA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTAGGCAGGGAAGGAAGTaGGAGCGCCACGGCGTGGGT +
Preference number: 3 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLRQGRK*ERHGVG
Trigger: ACCCACGCCGTGGCGCTCCAACTTCCTTCCCTGCCT...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CCA 72 bp GTATTTGAACCTTGGGAGCACCCAAGCTTGCTCATGTaGCAACATGGCCCTTCCTGTCCCTTTATTGATGTC +
Preference number: 3 (lower is better)
Translates to: VFEPWEHPSLLM*QHGPSCPFIDV
Trigger: GACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTCCCAAGGTTCAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CAA 90 bp TCCTTCCCCTCCTTTGAGCCTCGGAACCTCCTCAGCCTGTTTGAGGACACCCTATCTAATAAAAAGTATTaGAACCTTGGGAGCACCCAA +
Preference number: 3 (lower is better)
Translates to: SFPSFEPRNLLSLFEDTLSNKKY*NLGSTQ
Trigger: TTGGGTGCTCCCAAGGTTCAAATACTTTTTATTAGA...TAGGGTGTCCTCAAACAGGCTGAGGAGGTTCCGAGGCTCAAAGGAGGGGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR TCA 72 bp GTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTaGACCTTGGGAGCACCCAAGCTTGCTCATGTGGCA +
Preference number: 3 (lower is better)
Translates to: VFSAWPCLIKSI*TLGAPKLAHVA
Trigger: TGCCACATGAGCAAGCTTGGGTGCTCCCAAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR-3UTR CAA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTGAGGAACACCTGGTGTaGCTAACTCTAGGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLEEHLV*LTLGGC
Trigger: GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR GCA 72 bp AATAAAAAGTATTTGAACCTTGGGAGCACCCAAGCTTaGTCATGTGGCAACATGGCCCTTCCTGTCCCTTTA +
Preference number: 3 (lower is better)
Translates to: NKKYLNLGSTQA*SCGNMALPVPL
Trigger: TAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTCCCAAGGTTCAAATACTTTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCGACGCACCGGACGCCTaGGCGCACTGCGGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGDAPDA*AHCGRL
Trigger: GAGCCGACCGCAGTGCGCTCAGGCGTCCGGTGCGTC...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000318782.9
CDS-3UTR TCA 90 bp CCTTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTGGAGCCTGGAGCCCCTaGACCCAGACCCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: PCACGQLVQDGSTPPWSFGAWSP*TQTHSP
Trigger: CGGGGAGTGGGTCTGGGTTCAGGGGCTCCAGGCTCC...AAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCGATCGGCGCACGCGCTaGCTAGGGGGTCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGDRRTR*LGGPSP
Trigger: CGGGCTGGGACCCCCTAGCCAGCGCGTGCGCCGATC...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000318782.9
CDS-3UTR CCA 90 bp TGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCCGGCCAGGAACGCCATaGTCCGCACCGCGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: WEEHLVLLTLGGCCGQAGRPGTP*SAPRGQ
Trigger: CTGCCCGCGCGGTGCGGACCATGGCGTTCCTGGCCG...GCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp TTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTTGCTCTCCCGTCGCCCTTaGAAGCTGGGGCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LCLWPAGTRRVHAPLVLLLSRRP*KLGPLG
Trigger: CCCGAGGGGCCCCAGCTTTCAAGGGCGACGGGAGAG...CAAAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp CCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGGCCAGCCCGGACGCCTaGGCGCACTGCGGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: PLADELGGTPGVANSRRLASPDA*AHCGRL
Trigger: GAGCCGACCGCAGTGCGCTCAGGCGTCCGGGCTGGC...CAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576565.1
CDS-3UTR GCA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCGGCAGCCCGTGCTCCTaGTGTCCCCGAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGGSPCS*CPRASS
Trigger: GGAGGAGGCTCGGGGACAGCAGGAGCACGGGCTGCC...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCGGCGGCGGCGGCGGTaGCCGGTAGTCTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LGGTPGVANSRRLLWAGWRRRRR*PVVSLQ
Trigger: CTGCAGAGAGACTACCGGCCACCGCCGCCGCCGCCG...CCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000576565.1
CDS-3UTR CCA 90 bp GGATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGGATCGGCGCACGCGCTaGCTAGGGGGTCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GSEAAELPVSVSWKKQLQDRRTR*LGGPSP
Trigger: CGGGCTGGGACCCCCTAGCCAGCGCGTGCGCCGATC...CTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000318782.9
CDS-3UTR CCA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCGAGCCTCCTCCTCAGTaGGGCCGCAGCGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGEPPPQ*GRSAGR
Trigger: CCTTCCCGCGCTGCGGCCCCACTGAGGAGGAGGCTC...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp TGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCGCCTTCACTCTCCCCTaGGGCTGTCCTGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: WEEHLVLLTLGGCCGQAGAFTLP*GCPGPD
Trigger: GTCCGGGCCAGGACAGCCTCAGGGGAGAGTGAAGGC...GCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GGATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGGGCAGCCCGTGCTCCTaGTGTCCCCGAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSEAAELPVSVSWKKQLQGSPCS*CPRASS
Trigger: GGAGGAGGCTCGGGGACAGCAGGAGCACGGGCTGCC...CTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp TCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCACGCCGGCGTGCAGCTaGAGGATGGAGCCCACGCTC +
Preference number: 4 (lower is better)
Translates to: SEAAELPVSVSWKKQLQPTPACS*RMEPTL
Trigger: GAGCGTGGGCTCCATCCTGCAGCTGCACGCCGGCGT...GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCGGCCAGGAACGCCATaGTCCGCACCGCGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLADELGGTPGVANSRRLRPGTP*SAPRGQ
Trigger: CTGCCCGCGCGGTGCGGACCATGGCGTTCCTGGCCG...CAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGAGCCCGAGCCGCTGCTaGCGGGCCGGTACCCGGTCA +
Preference number: 4 (lower is better)
Translates to: PLADELGGTPGVANSRRLSPSRC*RAGTRS
Trigger: TGACCGGGTACCGGCCCGCCAGCAGCGGCTCGGGCT...CAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp ACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGAGCCCGAGCCGCTGCTaGCGGGCCGGTACCCGGTCA +
Preference number: 4 (lower is better)
Translates to: TSWEEHLVLLTLGGCCGQSPSRC*RAGTRS
Trigger: TGACCGGGTACCGGCCCGCCAGCAGCGGCTCGGGCT...CTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCATCCCGGGGACAGGCGTaGTGGGCAGCCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: EHLVLLTLGGCCGQAGMASRGQA*WAAQSR
Trigger: CCTGCTCTGGGCTGCCCACCACGCCTGTCCCCGGGA...TGCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCGTGGGCAGGCTGGCATaGCAGCTCAGTCCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGVGRLA*QLSPGD
Trigger: GTCCCCGGGACTGAGCTGCCATGCCAGCCTGCCCAC...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR TCA 90 bp CCTTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTGGGCCCCAAGGGTGTTaGCAAGGCAGACCCCACACA +
Preference number: 4 (lower is better)
Translates to: PCACGQLVQDGSTPPWSFGPQGC*QGRPHT
Trigger: TGTGTGGGGTCTGCCTTGTCAACACCCTTGGGGCCC...AAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000318782.9
CDS-3UTR TCA 90 bp GCCAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGAGCCTGGAGCCCCTaGACCCAGACCCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: ASPLQTSWEEHLVLLTLGGAWSP*TQTHSP
Trigger: CGGGGAGTGGGTCTGGGTTCAGGGGCTCCAGGCTCC...TCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR TCA 90 bp CAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGGGAGCCTGGAGCCCCTaGACCCAGACCCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: QPLADELGGTPGVANSRRGAWSP*TQTHSP
Trigger: CGGGGAGTGGGTCTGGGTTCAGGGGCTCCAGGCTCC...CCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR TCA 90 bp CAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCTCTCCCGTCGCCCTTaGAAGCTGGGGCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: QTSWEEHLVLLTLGGCCGLSRRP*KLGPLG
Trigger: CCCGAGGGGCCCCAGCTTTCAAGGGCGACGGGAGAG...CCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp CCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTCTCCCGTCGCCCTTaGAAGCTGGGGCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: PLADELGGTPGVANSRRLLSRRP*KLGPLG
Trigger: CCCGAGGGGCCCCAGCTTTCAAGGGCGACGGGAGAG...CAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCACGACGCCGGCGTaGAGCTGCAGGATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SWEEHLVLLTLGGCCGQAGTTPA*SCRMEP
Trigger: GGGCTCCATCCTGCAGCTGCACGCCGGCGTCGTGCC...AGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp GACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCACGACGCCGGCGTaGAGCTGCAGGATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: DELGGTPGVANSRRLLWAGTTPA*SCRMEP
Trigger: GGGCTCCATCCTGCAGCTGCACGCCGGCGTCGTGCC...TGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp AGGGAAGAACGGGTGAACAGGGCTCCTGCTGAGACATCTCATGAGCTGGAAGCAAGCCCGAGCCGCTGCTaGCGGGCCGGTACCCGGTCA +
Preference number: 4 (lower is better)
Translates to: REERVNRAPAETSHELEASPSRC*RAGTRS
Trigger: TGACCGGGTACCGGCCCGCCAGCAGCGGCTCGGGCT...TGCTTCCAGCTCATGAGATGTCTCAGCAGGAGCCCTGTTCACCCGTTCTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGTCCCGGGGACAGGCGTaGTGGGCAGCCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QPLADELGGTPGVANSRRSRGQA*WAAQSR
Trigger: CCTGCTCTGGGCTGCCCACCACGCCTGTCCCCGGGA...CCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp GCCAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGATCCCGGGGACAGGCGTaGTGGGCAGCCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ASPLQTSWEEHLVLLTLGSRGQA*WAAQSR
Trigger: CCTGCTCTGGGCTGCCCACCACGCCTGTCCCCGGGA...TCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp TTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTTGGGCAGGGAAGGAAGTTaGAGCGCCACGGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LCLWPAGTRRVHAPLVLLGREGS*SATAWV
Trigger: CACCCACGCCGTGGCGCTCCAACTTCCTTCCCTGCC...CAAAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGAGGGTGAGGAGGCTCTaGGCTGGCGGCCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGGTPGVANSRRLLWAGWRVRRL*AGGLAG
Trigger: TCCTGCCAGGCCGCCAGCCCAGAGCCTCCTCACCCT...CCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CCTTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTGTGCCTGTGGCCAGCTaGTACAAGACGGGTCCACGC +
Preference number: 4 (lower is better)
Translates to: PCACGQLVQDGSTPPWSFVPVAS*YKTGPR
Trigger: GCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCAC...AAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp TGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCAGGAACAGGATAGGGTaGGGAGGCTCTGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: WEEHLVLLTLGGCCGQAGRNRIG*GGSGLA
Trigger: CGCCAGCCCAGAGCCTCCTCACCCTATCCTGTTCCT...GCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp CAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGGCCTTCACTCTCCCCTaGGGCTGTCCTGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: QTSWEEHLVLLTLGGCCGAFTLP*GCPGPD
Trigger: GTCCGGGCCAGGACAGCCTCAGGGGAGAGTGAAGGC...CCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGGCAGGTAGAAGAGGCTaGGCAGGCAGCCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PLADELGGTPGVANSRRLAGRRG*AGSPSR
Trigger: GCGGCTCGGGCTGCCTGCGCAGCCTCTTCTACCTGC...CAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GCCAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGCAGGTAGAAGAGGCTaGGCAGGCAGCCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: ASPLQTSWEEHLVLLTLGAGRRG*AGSPSR
Trigger: GCGGCTCGGGCTGCCTGCGCAGCCTCTTCTACCTGC...TCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCAGGCGGGCAGCAGCCTaGCATCCAAATGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: ELGGTPGVANSRRLLWAGRRAAA*HPNARS
Trigger: GCTCCGGGCATTTGGATGGCAGGCTGCTGCCCGCCT...GCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATAGGCGGGCAGCAGCCTaGCATCCAAATGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHRRAAA*HPNARS
Trigger: GCTCCGGGCATTTGGATGGCAGGCTGCTGCCCGCCT...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp CCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGACGCCGGCGTGCAGCTaGAGGATGGAGCCCACGCTC +
Preference number: 4 (lower is better)
Translates to: PLADELGGTPGVANSRRLTPACS*RMEPTL
Trigger: GAGCGTGGGCTCCATCCTGCAGCTGCACGCCGGCGT...CAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp GCCAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAACGCCGGCGTGCAGCTaGAGGATGGAGCCCACGCTC +
Preference number: 4 (lower is better)
Translates to: ASPLQTSWEEHLVLLTLGTPACS*RMEPTL
Trigger: GAGCGTGGGCTCCATCCTGCAGCTGCACGCCGGCGT...TCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp CTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGGGCACGACGCCGGCGTaGAGCTGCAGGATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LADELGGTPGVANSRRLLGTTPA*SCRMEP
Trigger: GGGCTCCATCCTGCAGCTGCACGCCGGCGTCGTGCC...CAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp GAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCCCTGAGGCTGAGCCCTaGTGCAGAACCCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ELGGTPGVANSRRLLWAGPEAEP*CRTQRS
Trigger: GGAGCGCTGGGTTCTGCAGCAGGGCTCAGCCTCAGG...GCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp TCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCCGGGAGCCTGGAGCCTaGACAGGGACAGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SEAAELPVSVSWKKQLQPREPGA*TGTELV
Trigger: AACCAGCTCTGTCCCTGTGCAGGCTCCAGGCTCCCG...GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCCCAGCCAGCCATCCTTaGCCAGCTGACCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: ELGGTPGVANSRRLLWAGPASHP*PADPRA
Trigger: TGCCCTGGGGTCAGCTGGGCAAGGATGGCTGGCTGG...GCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318782.9
ENST00000576565.1
CDS-3UTR GCA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATCCAGCCAGCCATCCTTaGCCAGCTGACCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHPASHP*PADPRA
Trigger: TGCCCTGGGGTCAGCTGGGCAAGGATGGCTGGCTGG...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318782.9
ENST00000576565.1
CDS-3UTR CCA 90 bp TTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTCGGCGGCGGCGGCGGTaGCCGGTAGTCTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LQTSWEEHLVLLTLGGCCRRRRR*PVVSLQ
Trigger: CTGCAGAGAGACTACCGGCCACCGCCGCCGCCGCCG...ACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000576565.1
CDS-3UTR CCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAACGGCCAGGAACGCCATaGTCCGCACCGCGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAERPGTP*SAPRGQ
Trigger: CTGCCCGCGCGGTGCGGACCATGGCGTTCCTGGCCG...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTCCCGGGGACAGGCGTaGTGGGCAGCCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LADELGGTPGVANSRRLLSRGQA*WAAQSR
Trigger: CCTGCTCTGGGCTGCCCACCACGCCTGTCCCCGGGA...CAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp CAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGGTGGGCAGGCTGGCATaGCAGCTCAGTCCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: QPLADELGGTPGVANSRRVGRLA*QLSPGD
Trigger: GTCCCCGGGACTGAGCTGCCATGCCAGCCTGCCCAC...CCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp ACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGTGGGCAGGCTGGCATaGCAGCTCAGTCCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: TSWEEHLVLLTLGGCCGQVGRLA*QLSPGD
Trigger: GTCCCCGGGACTGAGCTGCCATGCCAGCCTGCCCAC...CTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp GAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCGCGCCACGGCGTGGGTaGAAGAGGTCAGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: ELGGTPGVANSRRLLWAGAPRRG*KRSVHR
Trigger: CCTGTGGACTGACCTCTTCCACCCACGCCGTGGCGC...GCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp AGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTAGGGTGAGGAGGCTCTaGGCTGGCGGCCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SWEEHLVLLTLGGCCGQARVRRL*AGGLAG
Trigger: TCCTGCCAGGCCGCCAGCCCAGAGCCTCCTCACCCT...AGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGGCGGGCAAGCTTGTaGCTGCTGGGAGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHGRASL*LLGGLV
Trigger: TACCAGCCCTCCCAGCAGCCACAAGCTTGCCCGCCC...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCGTATGGCACTCAAGGTaGAGGGCAGGCACGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SEAAELPVSVSWKKQLQPVWHSR*RAGTAQ
Trigger: CTGGGCCGTGCCTGCCCTCCACCTTGAGTGCCATAC...GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGTCGCCCTTGAAAGCTaGGGCCCCTCGGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHVALES*GPSGTP
Trigger: GGGAGTTCCCGAGGGGCCCCAGCTTTCAAGGGCGAC...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGGTCGCCCTTGAAAGCTaGGGCCCCTCGGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: LGGTPGVANSRRLLWAGWVALES*GPSGTP
Trigger: GGGAGTTCCCGAGGGGCCCCAGCTTTCAAGGGCGAC...CCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCCGCTCAGCAGGTGCATaGTCTGGTGGGAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: ELGGTPGVANSRRLLWAGRSAGA*SGGSCP
Trigger: GGGGCAACTCCCACCAGATCATGCACCTGCTGAGCG...GCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR TCA 90 bp GAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCACCTTGGGCCAGCAGCTaGAGCCCCATGCTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: EHLVLLTLGGCCGQAGMAPWASS*SPMLCG
Trigger: TCCACACAGCATGGGGCTTCAGCTGCTGGCCCAAGG...TGCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp CCTTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTCCTCCTCAGCCTGTTTaGGGACACCCTAGACCCAAC +
Preference number: 4 (lower is better)
Translates to: PCACGQLVQDGSTPPWSFPPQPV*GHPRPN
Trigger: GTTGGGTCTAGGGTGTCCTCAAACAGGCTGAGGAGG...AAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp ACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGAGGCGGGCAGCAGCCTaGCATCCAAATGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TSWEEHLVLLTLGGCCGQRRAAA*HPNARS
Trigger: GCTCCGGGCATTTGGATGGCAGGCTGCTGCCCGCCT...CTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp GAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCCCCAAGCAGCGCCAGTaGGTCCATGCGCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: ELGGTPGVANSRRLLWAGPKQRQ*VHAQVA
Trigger: TGCTACCTGCGCATGGACGCACTGGCGCTGCTTGGG...GCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAAGGCACGACGCCGGCGTaGAGCTGCAGGATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAEGTTPA*SCRMEP
Trigger: GGGCTCCATCCTGCAGCTGCACGCCGGCGTCGTGCC...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GCCAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGACCTGAGGCTGAGCCCTaGTGCAGAACCCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ASPLQTSWEEHLVLLTLGPEAEP*CRTQRS
Trigger: GGAGCGCTGGGTTCTGCAGCAGGGCTCAGCCTCAGG...TCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCCTGACTGTGGCTCCCTaGCTGTTTGTCAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGLTVAP*LFVRRE
Trigger: CTCCCGCCTGACAAACAGGCAGGGAGCCACAGTCAG...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCAGGCCACGCAATGTGTaGCTCCCAGCCAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGRPRNV*LPASHP
Trigger: AGGATGGCTGGCTGGGAGGCACACATTGCGTGGCCT...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318782.9
ENST00000576565.1
CDS-3UTR GCA 90 bp AGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGAGCCTGCAGGGGGTaGAAGGCAGGCCACGCAATG +
Preference number: 4 (lower is better)
Translates to: SWEEHLVLLTLGGCCGQAGACRG*KAGHAM
Trigger: CATTGCGTGGCCTGCCTTGCACCCCCTGCAGGCTCC...AGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318782.9
ENST00000576565.1
CDS-3UTR CCA 90 bp GAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCCGTGCAGCTGCAGGATaGAGCCCACGCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ELGGTPGVANSRRLLWAGRAAAG*SPRSAG
Trigger: ACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGCACG...GCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp GCCAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGCGCCACGGCGTGGGTaGAAGAGGTCAGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: ASPLQTSWEEHLVLLTLGAPRRG*KRSVHR
Trigger: CCTGTGGACTGACCTCTTCCACCCACGCCGTGGCGC...TCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCCAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCAGGGAAGGAAGTTaGAGCGCCACGGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: ASPLQTSWEEHLVLLTLGGREGS*SATAWV
Trigger: CACCCACGCCGTGGCGCTCCAACTTCCTTCCCTGCC...TCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGGGCAGGGAAGGAAGTTaGAGCGCCACGGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QTSWEEHLVLLTLGGCCGGREGS*SATAWV
Trigger: CACCCACGCCGTGGCGCTCCAACTTCCTTCCCTGCC...CCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCCAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGGCGGGCAAGCTTGTaGCTGCTGGGAGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: ASPLQTSWEEHLVLLTLGGRASL*LLGGLV
Trigger: TACCAGCCCTCCCAGCAGCCACAAGCTTGCCCGCCC...TCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGGGCGGGCAAGCTTGTaGCTGCTGGGAGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: ADELGGTPGVANSRRLLWGRASL*LLGGLV
Trigger: TACCAGCCCTCCCAGCAGCCACAAGCTTGCCCGCCC...CCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGTGCCTGTGGCCAGCTaGTACAAGACGGGTCCACGC +
Preference number: 4 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHVPVAS*YKTGPR
Trigger: GCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCAC...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGTATGGCACTCAAGGTaGAGGGCAGGCACGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EEHLVLLTLGGCCGQAGMVWHSR*RAGTAQ
Trigger: CTGGGCCGTGCCTGCCCTCCACCTTGAGTGCCATAC...CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GGATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGAGGCACATCCCCCGGTaGGTACCTGGAGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GSEAAELPVSVSWKKQLQRHIPR*VPGAVG
Trigger: CCCAACAGCTCCAGGTACCCACCGGGGGATGTGCCT...CTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGAGGCACATCCCCCGGTaGGTACCTGGAGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGGTPGVANSRRLLWAGWRHIPR*VPGAVG
Trigger: CCCAACAGCTCCAGGTACCCACCGGGGGATGTGCCT...CCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTTGCCTCGGGAACTCCCATaGTCTTCTCTGCCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LCLWPAGTRRVHAPLVLLPRELP*SSLPGR
Trigger: ACGGCCAGGCAGAGAAGACCATGGGAGTTCCCGAGG...CAAAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCGTCGCCCTTGAAAGCTaGGGCCCCTCGGGAACTCCC +
Preference number: 4 (lower is better)
Translates to: PLQTSWEEHLVLLTLGGCVALES*GPSGTP
Trigger: GGGAGTTCCCGAGGGGCCCCAGCTTTCAAGGGCGAC...GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATTGTCAGGCGGGAGCCTaGAGCCTGCACAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHCQAGA*SLHRDR
Trigger: TCTGTCCCTGTGCAGGCTCCAGGCTCCCGCCTGACA...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCGGACAGAGGGGGCCTTaGAGTGCAGCCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: SEAAELPVSVSWKKQLQPGQRGP*SAARWK
Trigger: CTTCCATCTGGCTGCACTCCAAGGCCCCCTCTGTCC...GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGGAGCCTGGAGCCCCTaGACCCAGACCCACTCCCCG +
Preference number: 4 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPGAWSP*TQTHSP
Trigger: CGGGGAGTGGGTCTGGGTTCAGGGGCTCCAGGCTCC...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCACGCTCAGCAGGTGCATaGTCTGGTGGGAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: DELGGTPGVANSRRLLWARSAGA*SGGSCP
Trigger: GGGGCAACTCCCACCAGATCATGCACCTGCTGAGCG...TGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR TCA 90 bp CAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCGCTCAGCAGGTGCATaGTCTGGTGGGAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: QTSWEEHLVLLTLGGCCGRSAGA*SGGSCP
Trigger: GGGGCAACTCCCACCAGATCATGCACCTGCTGAGCG...CCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR TCA 90 bp CCAGAGTCCCTCTCTGGTCTAACCCCACAGGTCACAGAGGGTAAAGAGGTCCCAAGGAACAGGATAGGGTaGGGAGGCTCTGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: PESLSGLTPQVTEGKEVPRNRIG*GGSGLA
Trigger: CGCCAGCCCAGAGCCTCCTCACCCTATCCTGTTCCT...TGGGACCTCTTTACCCTCTGTGACCTGTGGGGTTAGACCAGAGAGGGACTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp ACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGCCTTGGGCCAGCAGCTaGAGCCCCATGCTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: TSWEEHLVLLTLGGCCGQPWASS*SPMLCG
Trigger: TCCACACAGCATGGGGCTTCAGCTGCTGGCCCAAGG...CTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATTTATTGAACTGCAGGTaGGGCGGCGAGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHLLNCR*GGELAQ
Trigger: CTGGGCCAGCTCGCCGCCGCACCTGCAGTTCAATAA...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CCTTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTACGAACTTATTGAACTaGAGGTGCGGCGGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: PCACGQLVQDGSTPPWSFTNLLN*RCGGEL
Trigger: CAGCTCGCCGCCGCACCTGCAGTTCAATAAGTTCGT...AAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCAGCCTGCCATCCAAATaGCCGGAGCCGAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: ELGGTPGVANSRRLLWAGSLPSK*PEPSTG
Trigger: ACCAGTGCTCGGCTCCGGGCATTTGGATGGCAGGCT...GCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp CCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCCCCAAGCAGCGCCAGTaGGTCCATGCGCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: PLQTSWEEHLVLLTLGGCPKQRQ*VHAQVA
Trigger: TGCTACCTGCGCATGGACGCACTGGCGCTGCTTGGG...GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp AGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCCCCAAGCAGCGCCAGTaGGTCCATGCGCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: SPLQTSWEEHLVLLTLGGPKQRQ*VHAQVA
Trigger: TGCTACCTGCGCATGGACGCACTGGCGCTGCTTGGG...GCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp CCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCCGGGAGCCTGGAGCCTaGACAGGGACAGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PLQTSWEEHLVLLTLGGCREPGA*TGTELV
Trigger: AACCAGCTCTGTCCCTGTGCAGGCTCCAGGCTCCCG...GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCCGGGAGCCTGGAGCCTaGACAGGGACAGAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SPLQTSWEEHLVLLTLGGREPGA*TGTELV
Trigger: AACCAGCTCTGTCCCTGTGCAGGCTCCAGGCTCCCG...GCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCCGTGCAGCTGCAGGATaGAGCCCACGCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLQTSWEEHLVLLTLGGCRAAAG*SPRSAG
Trigger: ACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGCACG...GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp GCCAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGACGTGCAGCTGCAGGATaGAGCCCACGCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ASPLQTSWEEHLVLLTLGRAAAG*SPRSAG
Trigger: ACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGCACG...TCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp GAACTCTCAGAGCAAGACGTGACCCCAGAGTCCCTCTCTGGTCTAACCCCACAGTGGAGCGCCACGGCGTaGGTGGAAGAGGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: ELSEQDVTPESLSGLTPQWSATA*VEEVSP
Trigger: TGGACTGACCTCTTCCACCCACGCCGTGGCGCTCCA...CTGTGGGGTTAGACCAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATTGGCCACAGGCCTGGTaGGAGGAACAGGATAGGGTG +
Preference number: 4 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHWPQAW*EEQDRV
Trigger: CACCCTATCCTGTTCCTCCCACCAGGCCTGTGGCCA...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCGGAGATCAGGAAGACTaGCCACAGGCCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: DLRPLSSLCQFPGRSSCSGDQED*PQAWWE
Trigger: CTCCCACCAGGCCTGTGGCCAGTCTTCCTGATCTCC...GCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTTGGGCTGCTGGGAGGGCTaGTATGCAGGGCAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: LCLWPAGTRRVHAPLVLLGCWEG*YAGQKD
Trigger: ATCTTTCTGCCCTGCATACCAGCCCTCCCAGCAGCC...CAAAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGCAAGCTTGTGGCTGCTaGGAGGGCTGGTATGCAGGG +
Preference number: 4 (lower is better)
Translates to: EEHLVLLTLGGCCGQAGMQACGC*EGWYAG
Trigger: CCCTGCATACCAGCCCTCCCAGCAGCCACAAGCTTG...CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCAAGCTTGTGGCTGCTaGGAGGGCTGGTATGCAGGG +
Preference number: 4 (lower is better)
Translates to: DLRPLSSLCQFPGRSSCSQACGC*EGWYAG
Trigger: CCCTGCATACCAGCCCTCCCAGCAGCCACAAGCTTG...GCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCGGGTCCACGCCCCCTTaGTCCTTTTGTCCTGAATGC +
Preference number: 4 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGGSTPP*SFCPEC
Trigger: GCATTCAGGACAAAAGGACCAAGGGGGCGTGGACCC...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCCAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGTGCCTGTGGCCAGCTaGTACAAGACGGGTCCACGC +
Preference number: 4 (lower is better)
Translates to: ASPLQTSWEEHLVLLTLGVPVAS*YKTGPR
Trigger: GCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCAC...TCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGGTATGGCACTCAAGGTaGAGGGCAGGCACGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QPLADELGGTPGVANSRRVWHSR*RAGTAQ
Trigger: CTGGGCCGTGCCTGCCCTCCACCTTGAGTGCCATAC...CCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp AGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTCCCCCGGTGGGTACCTaGAGCTGTTGGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: SWEEHLVLLTLGGCCGQAPPVGT*SCWEYG
Trigger: GCCATACTCCCAACAGCTCCAGGTACCCACCGGGGG...AGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGCCCCCGGTGGGTACCTaGAGCTGTTGGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: ADELGGTPGVANSRRLLWPPVGT*SCWEYG
Trigger: GCCATACTCCCAACAGCTCCAGGTACCCACCGGGGG...CCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CCAGAGTCCCTCTCTGGTCTAACCCCACAGGTCACAGAGGGTAAAGAGGTCCCACCCCCGGTGGGTACCTaGAGCTGTTGGGAGTATGGC +
Preference number: 4 (lower is better)
Translates to: PESLSGLTPQVTEGKEVPPPVGT*SCWEYG
Trigger: GCCATACTCCCAACAGCTCCAGGTACCCACCGGGGG...TGGGACCTCTTTACCCTCTGTGACCTGTGGGGTTAGACCAGAGAGGGACTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGTGTCAGGCGGGAGCCTaGAGCCTGCACAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: QTSWEEHLVLLTLGGCCGCQAGA*SLHRDR
Trigger: TCTGTCCCTGTGCAGGCTCCAGGCTCCCGCCTGACA...CCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGACAGAGGGGGCCTTaGAGTGCAGCCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHGQRGP*SAARWK
Trigger: CTTCCATCTGGCTGCACTCCAAGGCCCCCTCTGTCC...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCTCAGCACGAACTTATTaGACTGCAGGTGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: DLRPLSSLCQFPGRSSCSSARTY*TAGAAA
Trigger: CGCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGA...GCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCATCAGCACGAACTTATTaGACTGCAGGTGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: EHLVLLTLGGCCGQAGMASARTY*TAGAAA
Trigger: CGCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGA...TGCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp TTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGTCTCAGAGCAAGACGTaGCCCCAGAGTCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGGTPGVANSRRLLWAGWSQSKT*PQSPSL
Trigger: CAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGA...CCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp CTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGCCTTGGGCCAGCAGCTaGAGCCCCATGCTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LADELGGTPGVANSRRLLPWASS*SPMLCG
Trigger: TCCACACAGCATGGGGCTTCAGCTGCTGGCCCAAGG...CAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGGCCTTCACTCTCCCCTaGGGCTGTCCTGGCCCGGAC +
Preference number: 4 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRAFTLP*GCPGPD
Trigger: GTCCGGGCCAGGACAGCCTCAGGGGAGAGTGAAGGC...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp AGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCCCATCCTTGCCCAGCTaGCCCCAGGGCATGGTCATT +
Preference number: 4 (lower is better)
Translates to: SPLQTSWEEHLVLLTLGGPSLPS*PQGMVI
Trigger: AATGACCATGCCCTGGGGTCAGCTGGGCAAGGATGG...GCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318782.9
ENST00000576565.1
CDS-3UTR TCA 90 bp GACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCACCATCCTTGCCCAGCTaGCCCCAGGGCATGGTCATT +
Preference number: 4 (lower is better)
Translates to: DELGGTPGVANSRRLLWAPSLPS*PQGMVI
Trigger: AATGACCATGCCCTGGGGTCAGCTGGGCAAGGATGG...TGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318782.9
ENST00000576565.1
CDS-3UTR GCA 90 bp GCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGTTATTGAACTGCAGGTaGGGCGGCGAGCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ADELGGTPGVANSRRLLWLLNCR*GGELAQ
Trigger: CTGGGCCAGCTCGCCGCCGCACCTGCAGTTCAATAA...CCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGGCAGGTAGAAGAGGCTaGGCAGGCAGCCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRAGRRG*AGSPSR
Trigger: GCGGCTCGGGCTGCCTGCGCAGCCTCTTCTACCTGC...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGAGCCTGCCATCCAAATaGCCGGAGCCGAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: QTSWEEHLVLLTLGGCCGSLPSK*PEPSTG
Trigger: ACCAGTGCTCGGCTCCGGGCATTTGGATGGCAGGCT...CCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp GACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAAGCCTGCCATCCAAATaGCCGGAGCCGAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: DELGGTPGVANSRRLLWASLPSK*PEPSTG
Trigger: ACCAGTGCTCGGCTCCGGGCATTTGGATGGCAGGCT...TGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp GGATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCACGCTCAGCAGGTaGATGATCTGGTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GSEAAELPVSVSWKKQLQPTLSR*MIWWEL
Trigger: CAACTCCCACCAGATCATGCACCTGCTGAGCGTGGG...CTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCAAGGAGCCAGCCCCTTaGAGACGAGTTGGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: ELGGTPGVANSRRLLWAGKEPAP*RRVGRN
Trigger: GTTCCTCCCAACTCGTCTGCAAGGGGCTGGCTCCTT...GCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CCAGAGTCCCTCTCTGGTCTAACCCCACAGGTCACAGAGGGTAAAGAGGTCCCACCTGGAAGAAGCAGCTaGAGCCCTTGTGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PESLSGLTPQVTEGKEVPPGRSS*SPCACG
Trigger: GCCACAGGCACAAGGGCTGCAGCTGCTTCTTCCAGG...TGGGACCTCTTTACCCTCTGTGACCTGTGGGGTTAGACCAGAGAGGGACTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGGGAGCACCCAAGCTTaGTCATGTGGCAACATGGCC +
Preference number: 4 (lower is better)
Translates to: EEHLVLLTLGGCCGQAGMGSTQA*SCGNMA
Trigger: GGCCATGTTGCCACATGAGCAAGCTTGGGTGCTCCC...CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCCTGACTGTGGCTCCCTaGCTGTTTGTCAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: PLQTSWEEHLVLLTLGGCLTVAP*LFVRRE
Trigger: CTCCCGCCTGACAAACAGGCAGGGAGCCACAGTCAG...GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CCAGAGTCCCTCTCTGGTCTAACCCCACAGGTCACAGAGGGTAAAGAGGTCCCACTGACTGTGGCTCCCTaGCTGTTTGTCAGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: PESLSGLTPQVTEGKEVPLTVAP*LFVRRE
Trigger: CTCCCGCCTGACAAACAGGCAGGGAGCCACAGTCAG...TGGGACCTCTTTACCCTCTGTGACCTGTGGGGTTAGACCAGAGAGGGACTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCATCTGGGCTGGCGGCCTaGCAGGACTTGAACTCTCAG +
Preference number: 4 (lower is better)
Translates to: DELGGTPGVANSRRLLWASGLAA*QDLNSQ
Trigger: CTGAGAGTTCAAGTCCTGCCAGGCCGCCAGCCCAGA...TGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGAGGGTGAGGAGGCTCTaGGCTGGCGGCCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRRVRRL*AGGLAG
Trigger: TCCTGCCAGGCCGCCAGCCCAGAGCCTCCTCACCCT...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp AGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTTGGCCACAGGCCTGGTaGGAGGAACAGGATAGGGTG +
Preference number: 4 (lower is better)
Translates to: SWEEHLVLLTLGGCCGQAWPQAW*EEQDRV
Trigger: CACCCTATCCTGTTCCTCCCACCAGGCCTGTGGCCA...AGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp ACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGCAAGCTTGTGGCTGCTaGGAGGGCTGGTATGCAGGG +
Preference number: 4 (lower is better)
Translates to: TSWEEHLVLLTLGGCCGQQACGC*EGWYAG
Trigger: CCCTGCATACCAGCCCTCCCAGCAGCCACAAGCTTG...CTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGCCCTTGTGCCTGTaGCCAGCTGGTACAAGACGG +
Preference number: 4 (lower is better)
Translates to: QTSWEEHLVLLTLGGCCGQPLCL*PAGTRR
Trigger: CCGTCTTGTACCAGCTGGCCACAGGCACAAGGGCTG...CCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCCAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGACAGCCCTTGTGCCTGTaGCCAGCTGGTACAAGACGG +
Preference number: 4 (lower is better)
Translates to: ASPLQTSWEEHLVLLTLGQPLCL*PAGTRR
Trigger: CCGTCTTGTACCAGCTGGCCACAGGCACAAGGGCTG...TCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp AGGGAAGAACGGGTGAACAGGGCTCCTGCTGAGACATCTCATGAGCTGGAAGCATGTCAGGCGGGAGCCTaGAGCCTGCACAGGGACAGA +
Preference number: 4 (lower is better)
Translates to: REERVNRAPAETSHELEACQAGA*SLHRDR
Trigger: TCTGTCCCTGTGCAGGCTCCAGGCTCCCGCCTGACA...TGCTTCCAGCTCATGAGATGTCTCAGCAGGAGCCCTGTTCACCCGTTCTTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GAACTCTCAGAGCAAGACGTGACCCCAGAGTCCCTCTCTGGTCTAACCCCACAGTCAGCACGAACTTATTaGACTGCAGGTGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: ELSEQDVTPESLSGLTPQSARTY*TAGAAA
Trigger: CGCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGA...CTGTGGGGTTAGACCAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAACGCTCAGCAGGTGCATaGTCTGGTGGGAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAERSAGA*SGGSCP
Trigger: GGGGCAACTCCCACCAGATCATGCACCTGCTGAGCG...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCATCTCAGAGCAAGACGTaGCCCCAGAGTCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: DELGGTPGVANSRRLLWASQSKT*PQSPSL
Trigger: CAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGA...TGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp CAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGTCTCAGAGCAAGACGTaGCCCCAGAGTCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: QPLADELGGTPGVANSRRSQSKT*PQSPSL
Trigger: CAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGA...CCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAAAGGAACAGGATAGGGTaGGGAGGCTCTGGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAERNRIG*GGSGLA
Trigger: CGCCAGCCCAGAGCCTCCTCACCCTATCCTGTTCCT...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCACCTCCTCAGCCTGTTTaGGGACACCCTAGACCCAAC +
Preference number: 4 (lower is better)
Translates to: DELGGTPGVANSRRLLWAPPQPV*GHPRPN
Trigger: GTTGGGTCTAGGGTGTCCTCAAACAGGCTGAGGAGG...TGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp CCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCCTCCTCAGCCTGTTTaGGGACACCCTAGACCCAAC +
Preference number: 4 (lower is better)
Translates to: PLADELGGTPGVANSRRLPPQPV*GHPRPN
Trigger: GTTGGGTCTAGGGTGTCCTCAAACAGGCTGAGGAGG...CAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp TTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGTGCCCTGGACCTAAGTaGCATCAACTCAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LGGTPGVANSRRLLWAGWCPGPK*HQLRAS
Trigger: GGAGGCTCTGAGTTGATGTCACTTAGGTCCAGGGCA...CCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCATGCCCTGGACCTAAGTaGCATCAACTCAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: EHLVLLTLGGCCGQAGMACPGPK*HQLRAS
Trigger: GGAGGCTCTGAGTTGATGTCACTTAGGTCCAGGGCA...TGCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCCAGATGGAAGGACTTTaGAGGCTGTCCAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGQMEGL*RLSKCC
Trigger: GCAGCACTTGGACAGCCTTCAAAGTCCTTCCATCTG...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCAACGAACTTATTGAACTaGAGGTGCGGCGGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: EHLVLLTLGGCCGQAGMATNLLN*RCGGEL
Trigger: CAGCTCGCCGCCGCACCTGCAGTTCAATAAGTTCGT...TGCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AGGGAAGAACGGGTGAACAGGGCTCCTGCTGAGACATCTCATGAGCTGGAAGCAAGCCTGCCATCCAAATaGCCGGAGCCGAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: REERVNRAPAETSHELEASLPSK*PEPSTG
Trigger: ACCAGTGCTCGGCTCCGGGCATTTGGATGGCAGGCT...TGCTTCCAGCTCATGAGATGTCTCAGCAGGAGCCCTGTTCACCCGTTCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTAGGCGGGCAGCAGCCTaGCATCCAAATGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPRRAAA*HPNARS
Trigger: GCTCCGGGCATTTGGATGGCAGGCTGCTGCCCGCCT...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCCCACGCTCAGCAGGTaGATGATCTGGTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: QTSWEEHLVLLTLGGCCGPTLSR*MIWWEL
Trigger: CAACTCCCACCAGATCATGCACCTGCTGAGCGTGGG...CCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp GCCAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGACCCACGCTCAGCAGGTaGATGATCTGGTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ASPLQTSWEEHLVLLTLGPTLSR*MIWWEL
Trigger: CAACTCCCACCAGATCATGCACCTGCTGAGCGTGGG...TCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp CAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCTAACTCTAGGAGGCTaGTGTGGGCAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: QTSWEEHLVLLTLGGCCGLTLGG*CGQAGM
Trigger: CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAG...CCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp AGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTCTAACTCTAGGAGGCTaGTGTGGGCAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: SWEEHLVLLTLGGCCGQALTLGG*CGQAGM
Trigger: CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAG...AGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp CCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCCTAACTCTAGGAGGCTaGTGTGGGCAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: PLQTSWEEHLVLLTLGGCLTLGG*CGQAGM
Trigger: CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAG...GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR GCA 90 bp CCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCAAGGAGCCAGCCCCTTaGAGACGAGTTGGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PLQTSWEEHLVLLTLGGCKEPAP*RRVGRN
Trigger: GTTCCTCCCAACTCGTCTGCAAGGGGCTGGCTCCTT...GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp TTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGGCAGCTGAAGCCCCATaGTGTGTGGAGCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LGGTPGVANSRRLLWAGWAAEAP*CVEQRG
Trigger: ACCTCTTTGCTCCACACAGCATGGGGCTTCAGCTGC...CCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CCAGAGTCCCTCTCTGGTCTAACCCCACAGGTCACAGAGGGTAAAGAGGTCCCAGGGAGCACCCAAGCTTaGTCATGTGGCAACATGGCC +
Preference number: 4 (lower is better)
Translates to: PESLSGLTPQVTEGKEVPGSTQA*SCGNMA
Trigger: GGCCATGTTGCCACATGAGCAAGCTTGGGTGCTCCC...TGGGACCTCTTTACCCTCTGTGACCTGTGGGGTTAGACCAGAGAGGGACTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGAGGCCACGCAATGTGTaGCTCCCAGCCAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: LADELGGTPGVANSRRLLRPRNV*LPASHP
Trigger: AGGATGGCTGGCTGGGAGGCACACATTGCGTGGCCT...CAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318782.9
ENST00000576565.1
CDS-3UTR GCA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGGAGCCTGCAGGGGGTaGAAGGCAGGCCACGCAATG +
Preference number: 4 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPGACRG*KAGHAM
Trigger: CATTGCGTGGCCTGCCTTGCACCCCCTGCAGGCTCC...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000318782.9
CDS-3UTR CCA 90 bp TTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTCGTGCAGCTGCAGGATaGAGCCCACGCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LQTSWEEHLVLLTLGGCCRAAAG*SPRSAG
Trigger: ACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGCACG...ACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp GAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCACCCTTGCAGACGAGTTaGGAGGAACACCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: EHLVLLTLGGCCGQAGMAPLQTS*EEHLVL
Trigger: CAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG...TGCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp GAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGCCCTTGCAGACGAGTTaGGAGGAACACCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: EEHLVLLTLGGCCGQAGMPLQTS*EEHLVL
Trigger: CAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG...CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp AGGGAAGAACGGGTGAACAGGGCTCCTGCTGAGACATCTCATGAGCTGGAAGCATCTGGGCTGGCGGCCTaGCAGGACTTGAACTCTCAG +
Preference number: 4 (lower is better)
Translates to: REERVNRAPAETSHELEASGLAA*QDLNSQ
Trigger: CTGAGAGTTCAAGTCCTGCCAGGCCGCCAGCCCAGA...TGCTTCCAGCTCATGAGATGTCTCAGCAGGAGCCCTGTTCACCCGTTCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGGGAGATCAGGAAGACTaGCCACAGGCCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LADELGGTPGVANSRRLLGDQED*PQAWWE
Trigger: CTCCCACCAGGCCTGTGGCCAGTCTTCCTGATCTCC...CAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGCTGGGAGGGCTaGTATGCAGGGCAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: DELGGTPGVANSRRLLWAGCWEG*YAGQKD
Trigger: ATCTTTCTGCCCTGCATACCAGCCCTCCCAGCAGCC...TGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGGCTGCTGGGAGGGCTaGTATGCAGGGCAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: ADELGGTPGVANSRRLLWGCWEG*YAGQKD
Trigger: ATCTTTCTGCCCTGCATACCAGCCCTCCCAGCAGCC...CCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp ACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGTTACTCCATAGTCTCTaGGCAGAGGGAGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: TSWEEHLVLLTLGGCCGQLLHSL*AEGARA
Trigger: CGCCCTGGCTCCCTCTGCCCAGAGACTATGGAGTAA...CTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGGGGTCCACGCCCCCTTaGTCCTTTTGTCCTGAATGC +
Preference number: 4 (lower is better)
Translates to: QPLADELGGTPGVANSRRGSTPP*SFCPEC
Trigger: GCATTCAGGACAAAAGGACCAAGGGGGCGTGGACCC...CCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GAACTCTCAGAGCAAGACGTGACCCCAGAGTCCCTCTCTGGTCTAACCCCACAGGGGTCCACGCCCCCTTaGTCCTTTTGTCCTGAATGC +
Preference number: 4 (lower is better)
Translates to: ELSEQDVTPESLSGLTPQGSTPP*SFCPEC
Trigger: GCATTCAGGACAAAAGGACCAAGGGGGCGTGGACCC...CTGTGGGGTTAGACCAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCAGAGCTGTTGGGAGTATaGCACTCAAGGTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EHLVLLTLGGCCGQAGMAELLGV*HSRWRA
Trigger: TGCCCTCCACCTTGAGTGCCATACTCCCAACAGCTC...TGCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCGGTACCTGGAGCTGTTaGGAGTATGGCACTCAAGGT +
Preference number: 4 (lower is better)
Translates to: WEEHLVLLTLGGCCGQAGGTWSC*EYGTQG
Trigger: ACCTTGAGTGCCATACTCCCAACAGCTCCAGGTACC...GCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CCTTGTGCCTGTGGCCAGCTGGTACAAGACGGGTCCACGCCCCCTTGGTCCTTTGGCAGGGCTAGCTTTTaGATCCTGAGTGTCACTACT +
Preference number: 4 (lower is better)
Translates to: PCACGQLVQDGSTPPWSFGRASF*ILSVTT
Trigger: AGTAGTGACACTCAGGATCCAAAAGCTAGCCCTGCC...AAAGGACCAAGGGGGCGTGGACCCGTCTTGTACCAGCTGGCCACAGGCACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp AGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCGCACAGGGACAGAGCTaGTTTCATCCGGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: SPLQTSWEEHLVLLTLGGAQGQS*FHPALP
Trigger: AGGGAGTGCCGGATGAAACCAGCTCTGTCCCTGTGC...GCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCGCACAGGGACAGAGCTaGTTTCATCCGGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: PLQTSWEEHLVLLTLGGCAQGQS*FHPALP
Trigger: AGGGAGTGCCGGATGAAACCAGCTCTGTCCCTGTGC...GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CCAGAGTCCCTCTCTGGTCTAACCCCACAGGTCACAGAGGGTAAAGAGGTCCCAGCACAGGGACAGAGCTaGTTTCATCCGGCACTCCCT +
Preference number: 4 (lower is better)
Translates to: PESLSGLTPQVTEGKEVPAQGQS*FHPALP
Trigger: AGGGAGTGCCGGATGAAACCAGCTCTGTCCCTGTGC...TGGGACCTCTTTACCCTCTGTGACCTGTGGGGTTAGACCAGAGAGGGACTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp AGGGAAGAACGGGTGAACAGGGCTCCTGCTGAGACATCTCATGAGCTGGAAGCAGGACAGAGGGGGCCTTaGAGTGCAGCCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: REERVNRAPAETSHELEAGQRGP*SAARWK
Trigger: CTTCCATCTGGCTGCACTCCAAGGCCCCCTCTGTCC...TGCTTCCAGCTCATGAGATGTCTCAGCAGGAGCCCTGTTCACCCGTTCTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGTGCCCTGGACCTAAGTaGCATCAACTCAGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ADELGGTPGVANSRRLLWCPGPK*HQLRAS
Trigger: GGAGGCTCTGAGTTGATGTCACTTAGGTCCAGGGCA...CCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCAGTTTTTATTGTCCCTaGCTGTGGCTCCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGSFYCP*LWLPAC
Trigger: ACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACT...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCCAAGTCCATGTGTTCTaGAAAGGACAGAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: ELGGTPGVANSRRLLWAGQVHVF*KGQRGP
Trigger: AGGCCCCCTCTGTCCTTTTCAGAACACATGGACTTG...GCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp TTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCAAGTCCATGTGTTCTaGAAAGGACAGAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGGTPGVANSRRLLWAGWQVHVF*KGQRGP
Trigger: AGGCCCCCTCTGTCCTTTTCAGAACACATGGACTTG...CCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp ACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGACGAACTTATTGAACTaGAGGTGCGGCGGCGAGCTG +
Preference number: 4 (lower is better)
Translates to: TSWEEHLVLLTLGGCCGQTNLLN*RCGGEL
Trigger: CAGCTCGCCGCCGCACCTGCAGTTCAATAAGTTCGT...CTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGAAGGAGCCAGCCCCTTaGAGACGAGTTGGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LADELGGTPGVANSRRLLKEPAP*RRVGRN
Trigger: GTTCCTCCCAACTCGTCTGCAAGGGGCTGGCTCCTT...CAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAACAGCTGCAGCCCTTGTaGCTGTGGCCAGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAEQLQPL*LWPAGT
Trigger: TGTACCAGCTGGCCACAGGCACAAGGGCTGCAGCTG...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp TTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTCAGCTGCAGCCCTTGTaGCTGTGGCCAGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: LQTSWEEHLVLLTLGGCCQLQPL*LWPAGT
Trigger: TGTACCAGCTGGCCACAGGCACAAGGGCTGCAGCTG...ACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAACCTGGAAGAAGCAGCTaGAGCCCTTGTGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAEPGRSS*SPCACG
Trigger: GCCACAGGCACAAGGGCTGCAGCTGCTTCTTCCAGG...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp TTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTCCTGGAAGAAGCAGCTaGAGCCCTTGTGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LQTSWEEHLVLLTLGGCCPGRSS*SPCACG
Trigger: GCCACAGGCACAAGGGCTGCAGCTGCTTCTTCCAGG...ACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGGCAGCTGAAGCCCCATaGTGTGTGGAGCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: QTSWEEHLVLLTLGGCCGAAEAP*CVEQRG
Trigger: ACCTCTTTGCTCCACACAGCATGGGGCTTCAGCTGC...CCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCGCAGCTGAAGCCCCATaGTGTGTGGAGCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: PLQTSWEEHLVLLTLGGCAAEAP*CVEQRG
Trigger: ACCTCTTTGCTCCACACAGCATGGGGCTTCAGCTGC...GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp TGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCCTGAGCCCCAGACTCTaGCTCTGCACTTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: WEEHLVLLTLGGCCGQAGLSPRL*LCTFNL
Trigger: AAGGTTAAAAGTGCAGAGGCAGAGTCTGGGGCTCAG...GCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGCCCTTGCAGACGAGTTaGGAGGAACACCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: ADELGGTPGVANSRRLLWPLQTS*EEHLVL
Trigger: CAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG...CCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CCA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGTGGAGCGCCACGGCGTaGGTGGAAGAGGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRWSATA*VEEVSP
Trigger: TGGACTGACCTCTTCCACCCACGCCGTGGCGCTCCA...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTTGGCCACAGGCCTGGTaGGAGGAACAGGATAGGGTG +
Preference number: 4 (lower is better)
Translates to: LQTSWEEHLVLLTLGGCCWPQAW*EEQDRV
Trigger: CACCCTATCCTGTTCCTCCCACCAGGCCTGTGGCCA...ACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp AGGGAAGAACGGGTGAACAGGGCTCCTGCTGAGACATCTCATGAGCTGGAAGCATTACTCCATAGTCTCTaGGCAGAGGGAGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: REERVNRAPAETSHELEALLHSL*AEGARA
Trigger: CGCCCTGGCTCCCTCTGCCCAGAGACTATGGAGTAA...TGCTTCCAGCTCATGAGATGTCTCAGCAGGAGCCCTGTTCACCCGTTCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp ACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGCCTGTGTCAGTTTCCTaGAAGAAGCAGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TSWEEHLVLLTLGGCCGQPVSVS*KKQLQP
Trigger: GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGG...CTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GAACTCTCAGAGCAAGACGTGACCCCAGAGTCCCTCTCTGGTCTAACCCCACAGGAGCTGTTGGGAGTATaGCACTCAAGGTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ELSEQDVTPESLSGLTPQELLGV*HSRWRA
Trigger: TGCCCTCCACCTTGAGTGCCATACTCCCAACAGCTC...CTGTGGGGTTAGACCAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGTACCTGGAGCTGTTaGGAGTATGGCACTCAAGGT +
Preference number: 4 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHGTWSC*EYGTQG
Trigger: ACCTTGAGTGCCATACTCCCAACAGCTCCAGGTACC...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GAGCACCCAAGCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATAGGCACATCCCCCGGTaGGTACCTGGAGCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: EHPSLLMWQHGPSCPFIDRHIPR*VPGAVG
Trigger: CCCAACAGCTCCAGGTACCCACCGGGGGATGTGCCT...ATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCACCAAGCTTGCTCATGTaGCAACATGGCCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: EHLVLLTLGGCCGQAGMAPSLLM*QHGPSC
Trigger: ACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGG...TGCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCAAGCTTGCTCATGTaGCAACATGGCCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: DLRPLSSLCQFPGRSSCSPSLLM*QHGPSC
Trigger: ACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGG...GCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CAA 72 bp TGGAAGCATCCAAGGAGCCAGCCCCTTGCAGACGAGTaGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: WKHPRSQPLADE*GGTPGVANSRR
Trigger: CCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTGGCTCCTTGGATGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTCGTGCGTGTAGATGTTaGCCAGTTCGTTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SWEEHLVLLTLGGCCGQARACRC*PVRCAG
Trigger: ACCTGCACAACGAACTGGGCAACATCTACACGCACG...AGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GAGCACCCAAGCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATCAGCTGCAGCCCTTGTaGCTGTGGCCAGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: EHPSLLMWQHGPSCPFIDQLQPL*LWPAGT
Trigger: TGTACCAGCTGGCCACAGGCACAAGGGCTGCAGCTG...ATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp TTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGTTTGTCCTGAGGCTGAGCCCTaGTGCAGAACCCAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: FRVHQVFIVPDCGSLPVCPEAEP*CRTQRS
Trigger: GGAGCGCTGGGTTCTGCAGCAGGGCTCAGCCTCAGG...ACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATCTGAGCCCCAGACTCTaGCTCTGCACTTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHLSPRL*LCTFNL
Trigger: AAGGTTAAAAGTGCAGAGGCAGAGTCTGGGGCTCAG...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGTCTGGGCTGGCGGCCTaGCAGGACTTGAACTCTCAG +
Preference number: 4 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRSGLAA*QDLNSQ
Trigger: CTGAGAGTTCAAGTCCTGCCAGGCCGCCAGCCCAGA...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGCCTGTGTCAGTTTCCTaGAAGAAGCAGCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LADELGGTPGVANSRRLLPVSVS*KKQLQP
Trigger: GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGG...CAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GGATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGGCTCATGTGGCAACATaGCCCTTCCTGTCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: GSEAAELPVSVSWKKQLQAHVAT*PFLSLY
Trigger: ATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGC...CTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGCCAAGCTTGCTCATGTaGCAACATGGCCCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: ADELGGTPGVANSRRLLWPSLLM*QHGPSC
Trigger: ACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGG...CCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTCCTCGGGAACTCCCATaGTCTTCTCTGCCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPPRELP*SSLPGR
Trigger: ACGGCCAGGCAGAGAAGACCATGGGAGTTCCCGAGG...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGGGCAGGGCTAGCTTTTaGATCCTGAGTGTCACTACT +
Preference number: 4 (lower is better)
Translates to: LGGTPGVANSRRLLWAGWGRASF*ILSVTT
Trigger: AGTAGTGACACTCAGGATCCAAAAGCTAGCCCTGCC...CCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGAGTGCAGCCAGATaGAAGGACTTTGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ELGGTPGVANSRRLLWAGWSAAR*KDFEGC
Trigger: ACAGCCTTCAAAGTCCTTCCATCTGGCTGCACTCCA...GCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGCTAGCTTTTGGATCCTaGGTGTCACTACTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EEHLVLLTLGGCCGQAGMLAFGS*VSLLSP
Trigger: AGGAGAGAGTAGTGACACTCAGGATCCAAAAGCTAG...CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp ACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGAGTTTTTATTGTCCCTaGCTGTGGCTCCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TSWEEHLVLLTLGGCCGQSFYCP*LWLPAC
Trigger: ACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACT...CTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTGGCAGCCCGTGCTCCTaGTGTCCCCGAGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLGSPCS*CPRASS
Trigger: GGAGGAGGCTCGGGGACAGCAGGAGCACGGGCTGCC...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AGGGAAGAACGGGTGAACAGGGCTCCTGCTGAGACATCTCATGAGCTGGAAGCACGTGCGTGTAGATGTTaGCCAGTTCGTTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: REERVNRAPAETSHELEARACRC*PVRCAG
Trigger: ACCTGCACAACGAACTGGGCAACATCTACACGCACG...TGCTTCCAGCTCATGAGATGTCTCAGCAGGAGCCCTGTTCACCCGTTCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CAGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGAGCCCCAGACTCTaGCTCTGCACTTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: QPLADELGGTPGVANSRRLSPRL*LCTFNL
Trigger: AAGGTTAAAAGTGCAGAGGCAGAGTCTGGGGCTCAG...CCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGTTACTCCATAGTCTCTaGGCAGAGGGAGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRLLHSL*AEGARA
Trigger: CGCCCTGGCTCCCTCTGCCCAGAGACTATGGAGTAA...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TCCTTCCCCTCCTTTGAGCCTCGGAACCTCCTCAGCCTGTTTGAGGACACCCTAGGCAGGGCTAGCTTTTaGATCCTGAGTGTCACTACT +
Preference number: 4 (lower is better)
Translates to: SFPSFEPRNLLSLFEDTLGRASF*ILSVTT
Trigger: AGTAGTGACACTCAGGATCCAAAAGCTAGCCCTGCC...TAGGGTGTCCTCAAACAGGCTGAGGAGGTTCCGAGGCTCAAAGGAGGGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GAACTCTCAGAGCAAGACGTGACCCCAGAGTCCCTCTCTGGTCTAACCCCACAGTGGAGTGCAGCCAGATaGAAGGACTTTGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ELSEQDVTPESLSGLTPQWSAAR*KDFEGC
Trigger: ACAGCCTTCAAAGTCCTTCCATCTGGCTGCACTCCA...CTGTGGGGTTAGACCAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CAA 72 bp TGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATaGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CSCGNMALPVPL*MSSRVLTPLRL
Trigger: CAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp CCAGAGTCCCTCTCTGGTCTAACCCCACAGGTCACAGAGGGTAAAGAGGTCCCACTAGCTTTTGGATCCTaGGTGTCACTACTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PESLSGLTPQVTEGKEVPLAFGS*VSLLSP
Trigger: AGGAGAGAGTAGTGACACTCAGGATCCAAAAGCTAG...TGGGACCTCTTTACCCTCTGTGACCTGTGGGGTTAGACCAGAGAGGGACTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAACAGATGGAAGGACTTTaGAGGCTGTCCAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAEQMEGL*RLSKCC
Trigger: GCAGCACTTGGACAGCCTTCAAAGTCCTTCCATCTG...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAACAAGTCCATGTGTTCTaGAAAGGACAGAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAEQVHVF*KGQRGP
Trigger: AGGCCCCCTCTGTCCTTTTCAGAACACATGGACTTG...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTTCCCATGGTCTTCTCTaGCTGGCCGTGTCTAATAAA +
Preference number: 4 (lower is better)
Translates to: SWEEHLVLLTLGGCCGQASHGLL*LAVSNK
Trigger: TTTATTAGACACGGCCAGGCAGAGAAGACCATGGGA...AGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GGATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGAGTAAAATAGGAGCTTaGAGGGAAAAGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GSEAAELPVSVSWKKQLQSKIGA*REKAGK
Trigger: CTTCCCTGCCTTTTCCCTCCAAGCTCCTATTTTACT...CTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGAGTAAAATAGGAGCTTaGAGGGAAAAGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LGGTPGVANSRRLLWAGWSKIGA*REKAGK
Trigger: CTTCCCTGCCTTTTCCCTCCAAGCTCCTATTTTACT...CCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGTTTGTGGAGATCAGGAAGACTaGCCACAGGCCTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FRVHQVFIVPDCGSLPVCGDQED*PQAWWE
Trigger: CTCCCACCAGGCCTGTGGCCAGTCTTCCTGATCTCC...ACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGTTTGTCAGCCCTTGTGCCTGTaGCCAGCTGGTACAAGACGG +
Preference number: 4 (lower is better)
Translates to: FRVHQVFIVPDCGSLPVCQPLCL*PAGTRR
Trigger: CCGTCTTGTACCAGCTGGCCACAGGCACAAGGGCTG...ACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GAGCACCCAAGCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGAGCTGTTGGGAGTATaGCACTCAAGGTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EHPSLLMWQHGPSCPFIDELLGV*HSRWRA
Trigger: TGCCCTCCACCTTGAGTGCCATACTCCCAACAGCTC...ATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCAAAGTATTTGAACCTTaGGAGCACCCAAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: DLRPLSSLCQFPGRSSCSKVFEP*EHPSLL
Trigger: GAGCAAGCTTGGGTGCTCCCAAGGTTCAAATACTTT...GCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp TTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGTTTGTCCTCGGGAACTCCCATaGTCTTCTCTGCCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: FRVHQVFIVPDCGSLPVCPRELP*SSLPGR
Trigger: ACGGCCAGGCAGAGAAGACCATGGGAGTTCCCGAGG...ACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTCAGATGGAAGGACTTTaGAGGCTGTCCAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPQMEGL*RLSKCC
Trigger: GCAGCACTTGGACAGCCTTCAAAGTCCTTCCATCTG...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp TTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGTTTGTCTAACTCTAGGAGGCTaGTGTGGGCAGGCTGGCATG +
Preference number: 4 (lower is better)
Translates to: FRVHQVFIVPDCGSLPVCLTLGG*CGQAGM
Trigger: CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAG...ACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCCCCAGACTCTGCCTCTaGACTTTTAACCTTTTATCC +
Preference number: 4 (lower is better)
Translates to: PLQTSWEEHLVLLTLGGCPRLCL*TFNLLS
Trigger: GGATAAAAGGTTAAAAGTGCAGAGGCAGAGTCTGGG...GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTCCCAGACTCTGCCTCTaGACTTTTAACCTTTTATCC +
Preference number: 4 (lower is better)
Translates to: SWEEHLVLLTLGGCCGQAPRLCL*TFNLLS
Trigger: GGATAAAAGGTTAAAAGTGCAGAGGCAGAGTCTGGG...AGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp ACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGAGTAAAATAGGAGCTTaGAGGGAAAAGGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: TSWEEHLVLLTLGGCCGQSKIGA*REKAGK
Trigger: CTTCCCTGCCTTTTCCCTCCAAGCTCCTATTTTACT...CTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGGGTACCTGGAGCTGTTaGGAGTATGGCACTCAAGGT +
Preference number: 4 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRGTWSC*EYGTQG
Trigger: ACCTTGAGTGCCATACTCCCAACAGCTCCAGGTACC...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp CAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGAAAGTATTTGAACCTTaGGAGCACCCAAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QTSWEEHLVLLTLGGCCGKVFEP*EHPSLL
Trigger: GAGCAAGCTTGGGTGCTCCCAAGGTTCAAATACTTT...CCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp AGGGAAGAACGGGTGAACAGGGCTCCTGCTGAGACATCTCATGAGCTGGAAGCATTGGTCCTTTTGTCCTaGATGCCTTACTCCATAGTC +
Preference number: 4 (lower is better)
Translates to: REERVNRAPAETSHELEALVLLS*MPYSIV
Trigger: GACTATGGAGTAAGGCATTCAGGACAAAAGGACCAA...TGCTTCCAGCTCATGAGATGTCTCAGCAGGAGCCCTGTTCACCCGTTCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCTAATAAAAAGTATTTaGACCTTGGGAGCACCCAAG +
Preference number: 4 (lower is better)
Translates to: DLRPLSSLCQFPGRSSCSLIKSI*TLGAPK
Trigger: CTTGGGTGCTCCCAAGGTTCAAATACTTTTTATTAG...GCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATCTAATAAAAAGTATTTaGACCTTGGGAGCACCCAAG +
Preference number: 4 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHLIKSI*TLGAPK
Trigger: CTTGGGTGCTCCCAAGGTTCAAATACTTTTTATTAG...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAACTAGCTTTTGGATCCTaGGTGTCACTACTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAELAFGS*VSLLSP
Trigger: AGGAGAGAGTAGTGACACTCAGGATCCAAAAGCTAG...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTCCCAAGCAGCGCCAGTaGGTCCATGCGCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLPKQRQ*VHAQVA
Trigger: TGCTACCTGCGCATGGACGCACTGGCGCTGCTTGGG...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp TTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTTCCCATGGTCTTCTCTaGCTGGCCGTGTCTAATAAA +
Preference number: 4 (lower is better)
Translates to: LQTSWEEHLVLLTLGGCCSHGLL*LAVSNK
Trigger: TTTATTAGACACGGCCAGGCAGAGAAGACCATGGGA...ACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp CTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGCCCAGACTCTGCCTCTaGACTTTTAACCTTTTATCC +
Preference number: 4 (lower is better)
Translates to: LADELGGTPGVANSRRLLPRLCL*TFNLLS
Trigger: GGATAAAAGGTTAAAAGTGCAGAGGCAGAGTCTGGG...CAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCAGTTTATTTCAAATCTaGCTCCAAGTCCATGTGTTC +
Preference number: 4 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGSLFQI*LQVHVF
Trigger: GAACACATGGACTTGGAGGCAGATTTGAAATAAACT...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTTGGAGCGCCACGGCGTaGGTGGAAGAGGTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLWSATA*VEEVSP
Trigger: TGGACTGACCTCTTCCACCCACGCCGTGGCGCTCCA...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGGCTCATGTGGCAACATaGCCCTTCCTGTCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRAHVAT*PFLSLY
Trigger: ATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGC...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGTGGAGTGCAGCCAGATaGAAGGACTTTGAAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRWSAAR*KDFEGC
Trigger: ACAGCCTTCAAAGTCCTTCCATCTGGCTGCACTCCA...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
3UTR CAA 72 bp GTCCAAGTGCTGCTTTCAGAGTGCACCAAGTTTTTATaGTCCCTGACTGTGGCTCCCTGCCTGTTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: VQVLLSECTKFL*SLTVAPCLFVR
Trigger: CCTGACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGCACTTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGCTAATAAAAAGTATTTaGACCTTGGGAGCACCCAAG +
Preference number: 4 (lower is better)
Translates to: ADELGGTPGVANSRRLLWLIKSI*TLGAPK
Trigger: CTTGGGTGCTCCCAAGGTTCAAATACTTTTTATTAG...CCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGTTGGTCCTTTTGTCCTaGATGCCTTACTCCATAGTC +
Preference number: 4 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRLVLLS*MPYSIV
Trigger: GACTATGGAGTAAGGCATTCAGGACAAAAGGACCAA...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTGGGAGCACCCAAGCTTaGTCATGTGGCAACATGGCC +
Preference number: 4 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLGSTQA*SCGNMA
Trigger: GGCCATGTTGCCACATGAGCAAGCTTGGGTGCTCCC...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCAGTTTATTTCAAATCTaGCTCCAAGTCCATGTGTTC +
Preference number: 4 (lower is better)
Translates to: SPLQTSWEEHLVLLTLGGSLFQI*LQVHVF
Trigger: GAACACATGGACTTGGAGGCAGATTTGAAATAAACT...GCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTAAAGTATTTGAACCTTaGGAGCACCCAAGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPKVFEP*EHPSLL
Trigger: GAGCAAGCTTGGGTGCTCCCAAGGTTCAAATACTTT...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CCA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTCCCTTGCAGACGAGTTaGGAGGAACACCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLPLQTS*EEHLVL
Trigger: CAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR TCA 90 bp TTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGTTTGTTTGGTCCTTTTGTCCTaGATGCCTTACTCCATAGTC +
Preference number: 4 (lower is better)
Translates to: FRVHQVFIVPDCGSLPVCLVLLS*MPYSIV
Trigger: GACTATGGAGTAAGGCATTCAGGACAAAAGGACCAA...ACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTCGTGCGTGTAGATGTTaGCCAGTTCGTTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLRACRC*PVRCAG
Trigger: ACCTGCACAACGAACTGGGCAACATCTACACGCACG...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp TTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTAGTTTATTTCAAATCTaGCTCCAAGTCCATGTGTTC +
Preference number: 4 (lower is better)
Translates to: LQTSWEEHLVLLTLGGCCSLFQI*LQVHVF
Trigger: GAACACATGGACTTGGAGGCAGATTTGAAATAAACT...ACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR GCA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTTCCCATGGTCTTCTCTaGCTGGCCGTGTCTAATAAA +
Preference number: 4 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLSHGLL*LAVSNK
Trigger: TTTATTAGACACGGCCAGGCAGAGAAGACCATGGGA...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS GCA 90 bp CGAGCCTCCTCCTCAGTGGGGCCGCAGCGCGGGAAGGCCCATCACTaGCTGGCGCCCGGCGCCCGGCGCCCACCCATCGCCCTGCGCTCG +
Preference number: 5 (lower is better)
Translates to: RASSSVGPQRGKAHH*LAPGARRPPIALRS
Trigger: CGAGCGCAGGGCGATGGGTGGGCGCCGGGCGCCGGGCGCCAGGCAGTGATGGGCCTTCCCGCGCTGCGGCCCCACTGAGGAGGAGGCTCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000318782.9
CDS CCA 90 bp AGGCAGACGCGCCGCAGGGACAGCTCGCGGCGGCGGCGGCGGCGGTaGCCGGTAGTCTCTCTGCAGCCAGGAGGACGGGCGCGGCCGGAC +
Preference number: 5 (lower is better)
Translates to: RQTRRRDSSRRRRRR*PVVSLQPGGRARPD
Trigger: GTCCGGCCGCGCCCGTCCTCCTGGCTGCAGAGAGACTACCGGCCACCGCCGCCGCCGCCGCCGCGAGCTGTCCCTGCGGCGCGTCTGCCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293978.12
CDS GCA 90 bp CGGCCCGGCCAGGAACGCCATGGTCCGCACCGCGCGGGCAGCCCGTaGTCCTGCTGTCCCCGAGCCTCCTCCTCAGTGGGGCCGCAGCGC +
Preference number: 5 (lower is better)
Translates to: RPGQERHGPHRAGSP*SCCPRASSSVGPQR
Trigger: GCGCTGCGGCCCCACTGAGGAGGAGGCTCGGGGACAGCAGGAGCACGGGCTGCCCGCGCGGTGCGGACCATGGCGTTCCTGGCCGGGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS CCA 90 bp CCTCCTCCTCAGTGGGGCCGCAGCGCGGGAAGGCCCATCACTGCCTaGCGCCCGGCGCCCGGCGCCCACCCATCGCCCTGCGCTCGATCG +
Preference number: 5 (lower is better)
Translates to: PPPQWGRSAGRPITA*RPAPGAHPSPCARS
Trigger: CGATCGAGCGCAGGGCGATGGGTGGGCGCCGGGCGCCGGGCGCCAGGCAGTGATGGGCCTTCCCGCGCTGCGGCCCCACTGAGGAGGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000318782.9
CDS GCA 90 bp GGCCAGGAACGCCATGGTCCGCACCGCGCGGGCAGCCCGTGCTCCTaGTGTCCCCGAGCCTCCTCCTCAGTGGGGCCGCAGCGCGGGAAG +
Preference number: 5 (lower is better)
Translates to: GQERHGPHRAGSPCS*CPRASSSVGPQRGK
Trigger: CTTCCCGCGCTGCGGCCCCACTGAGGAGGAGGCTCGGGGACAGCAGGAGCACGGGCTGCCCGCGCGGTGCGGACCATGGCGTTCCTGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS GCA 90 bp CTGGCGGGCCGGTACCCGGTCAGCACGAACTTATTGAACTGCAGGTaGGGCGGCGAGCTGGCCCAGTCCAGCAGGCGCGGCCCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LAGRYPVSTNLLNCR*GGELAQSSRRGPAR
Trigger: CCTGGCCGGGCCGCGCCTGCTGGACTGGGCCAGCTCGCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGACCGGGTACCGGCCCGCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS GCA 90 bp CCGCTGCTGGCGGGCCGGTACCCGGTCAGCACGAACTTATTGAACTaGAGGTGCGGCGGCGAGCTGGCCCAGTCCAGCAGGCGCGGCCCG +
Preference number: 5 (lower is better)
Translates to: PLLAGRYPVSTNLLN*RCGGELAQSSRRGP
Trigger: CGGGCCGCGCCTGCTGGACTGGGCCAGCTCGCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGACCGGGTACCGGCCCGCCAGCAGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS TCA 90 bp CCGAGCCGCTGCTGGCGGGCCGGTACCCGGTCAGCACGAACTTATTaGACTGCAGGTGCGGCGGCGAGCTGGCCCAGTCCAGCAGGCGCG +
Preference number: 5 (lower is better)
Translates to: PSRCWRAGTRSARTY*TAGAAASWPSPAGA
Trigger: CGCGCCTGCTGGACTGGGCCAGCTCGCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGACCGGGTACCGGCCCGCCAGCAGCGGCTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS GCA 90 bp CAGGCGTGGTGGGCAGCCCAGAGCAGGTCGGGCACGACGCCGGCGTaGAGCTGCAGGATGGAGCCCACGCTCAGCAGGTGCATGATCTGG +
Preference number: 5 (lower is better)
Translates to: QAWWAAQSRSGTTPA*SCRMEPTLSRCMIW
Trigger: CCAGATCATGCACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGCACGCCGGCGTCGTGCCCGACCTGCTCTGGGCTGCCCACCACGCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000574988.1
ENST00000576565.1
CDS CCA 90 bp TCCCAGCCAGCCATCCTTGCCCAGCTGACCCCAGGGCATGGTCATTaGCACCAGCACCAGGAAGCCCAGCAGGGCCAGCCCGGACGCCTG +
Preference number: 5 (lower is better)
Translates to: SQPAILAQLTPGHGH*HQHQEAQQGQPGRL
Trigger: CAGGCGTCCGGGCTGGCCCTGCTGGGCTTCCTGGTGCTGGTGCCAATGACCATGCCCTGGGGTCAGCTGGGCAAGGATGGCTGGCTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576565.1
CDS TCA 90 bp CCTGCCATCCAAATGCCCGGAGCCGAGCACTGGTGGAGGGGGCGGTaGGAGCACGCCAGCCGGCCACACCCGACAACACAGTGTAGCCCA +
Preference number: 5 (lower is better)
Translates to: PAIQMPGAEHWWRGR*EHASRPHPTTQCSP
Trigger: TGGGCTACACTGTGTTGTCGGGTGTGGCCGGCTGGCGTGCTCTCACCGCCCCCTCCACCAGTGCTCGGCTCCGGGCATTTGGATGGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000574988.1
ENST00000576565.1
CDS TCA 90 bp CGCCGGCGTGCAGCTGCAGGATGGAGCCCACGCTCAGCAGGTGCATaGTCTGGTGGGAGTTGCCCCAGTAGTCAAAGCGGCCAGGTCCCC +
Preference number: 5 (lower is better)
Translates to: RRRAAAGWSPRSAGA*SGGSCPSSQSGQVP
Trigger: GGGGACCTGGCCGCTTTGACTACTGGGGCAACTCCCACCAGATCATGCACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGCACGCCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000574988.1
ENST00000576565.1
CDS GCA 90 bp CGTGCGTGTAGATGTTGCCCAGTTCGTTGTGCAGGTAGAAGAGGCTaGGCAGGCAGCCCGAGCCGCTGCTGGCGGGCCGGTACCCGGTCA +
Preference number: 5 (lower is better)
Translates to: RACRCCPVRCAGRRG*AGSPSRCWRAGTRS
Trigger: TGACCGGGTACCGGCCCGCCAGCAGCGGCTCGGGCTGCCTGCGCAGCCTCTTCTACCTGCACAACGAACTGGGCAACATCTACACGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS CCA 90 bp TCCCAGCCAGCCATCCTTGCCCAGCTGACCCCAGGGCATGGTCATTaGCACCAGCACCAGGAAGCCCAGCAGGGCCAGCCCGTGCGTGTA +
Preference number: 5 (lower is better)
Translates to: SQPAILAQLTPGHGH*HQHQEAQQGQPVRV
Trigger: TACACGCACGGGCTGGCCCTGCTGGGCTTCCTGGTGCTGGTGCCAATGACCATGCCCTGGGGTCAGCTGGGCAAGGATGGCTGGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318782.9
CDS GCA 90 bp GACGGGCTACATTTACCAGTCCCCCAAGCAGCGCCAGTGCGTCCATaGGCAGGTAGCAGGGCAGGGAGCCTGGAGCCCCTGAACCCAGAC +
Preference number: 5 (lower is better)
Translates to: DGLHLPVPQAAPVRP*AGSRAGSLEPLNPD
Trigger: GTCTGGGTTCAGGGGCTCCAGGCTCCCTGCCCTGCTACCTGCGCATGGACGCACTGGCGCTGCTTGGGGGACTGGTAAATGTAGCCCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000574988.1
ENST00000576565.1
CDS-3UTR CAA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATCCAGGGCGGGCAAGCTaGTGGCTGCTGGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHPGRAS*WLLGGL
Trigger: CAGCCCTCCCAGCAGCCACAAGCTTGCCCGCCCTGG...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGCCAGGGCGGGCAAGCTaGTGGCTGCTGGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: EEHLVLLTLGGCCGQAGMPGRAS*WLLGGL
Trigger: CAGCCCTCCCAGCAGCCACAAGCTTGCCCGCCCTGG...CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCCCCTGGACACCCTCCTaGTCTCGCCTGCCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGPWTPS*SRLPSC
Trigger: GCAGGAGGGCAGGCGAGACAAGGAGGGTGTCCAGGG...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCCCCTGGACACCCTCCTaGTCTCGCCTGCCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: WEEHLVLLTLGGCCGQAGPWTPS*SRLPSC
Trigger: GCAGGAGGGCAGGCGAGACAAGGAGGGTGTCCAGGG...GCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS CCA 90 bp GAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTaGGCAGGCTGGCATGGCAGCTCAGTCCCGGGGACAGGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: ELGGTPGVANSRRLL*AGWHGSSVPGTGVV
Trigger: CACCACGCCTGTCCCCGGGACTGAGCTGCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CAA 90 bp TCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCAGGCAGGGAAGGAAGTaGGAGCGCCACGGCGTGGGT +
Preference number: 5 (lower is better)
Translates to: SEAAELPVSVSWKKQLQPRQGRK*ERHGVG
Trigger: ACCCACGCCGTGGCGCTCCAACTTCCTTCCCTGCCT...GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GAACTCTCAGAGCAAGACGTGACCCCAGAGTCCCTCTCTGGTCTAACCCCACAGCCAGGGCGGGCAAGCTaGTGGCTGCTGGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: ELSEQDVTPESLSGLTPQPGRAS*WLLGGL
Trigger: CAGCCCTCCCAGCAGCCACAAGCTTGCCCGCCCTGG...CTGTGGGGTTAGACCAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATTCTCTCCCGTCGCCCTaGAAAGCTGGGGCCCCTCGG +
Preference number: 5 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHSLPSP*KAGAPR
Trigger: CCGAGGGGCCCCAGCTTTCAAGGGCGACGGGAGAGA...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GGATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGAGGCAGGGAAGGAAGTaGGAGCGCCACGGCGTGGGT +
Preference number: 5 (lower is better)
Translates to: GSEAAELPVSVSWKKQLQRQGRK*ERHGVG
Trigger: ACCCACGCCGTGGCGCTCCAACTTCCTTCCCTGCCT...CTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCCAAGGAGCCAGCCCCTaGCAGACGAGTTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: WEEHLVLLTLGGCCGQAGQGASP*QTSWEE
Trigger: TTCCTCCCAACTCGTCTGCAAGGGGCTGGCTCCTTG...GCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCGCGGCCTGGCAGGACTaGAACTCTCAGAGCAAGACG +
Preference number: 5 (lower is better)
Translates to: SEAAELPVSVSWKKQLQPAAWQD*NSQSKT
Trigger: CGTCTTGCTCTGAGAGTTCAAGTCCTGCCAGGCCGC...GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp AGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTTGGCTCCCTGCCTGTTaGTCAGGCGGGAGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SWEEHLVLLTLGGCCGQAWLPAC*SGGSLE
Trigger: CTCCAGGCTCCCGCCTGACAAACAGGCAGGGAGCCA...AGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp AGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGGCTCCCTGCCTGTTaGTCAGGCGGGAGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SPLQTSWEEHLVLLTLGGWLPAC*SGGSLE
Trigger: CTCCAGGCTCCCGCCTGACAAACAGGCAGGGAGCCA...GCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS CCA 90 bp CAGGGCAAGACAGGTCCAGGTAATGCTGTCATCCAGTTGGCGGCCTaGCCTTGGCCAGAGACAGGCCCTGGGCAAAAGGCTTTTGGCACT +
Preference number: 5 (lower is better)
Translates to: QGKTGPGNAVIQLAA*PWPETGPGQKAFGT
Trigger: AGTGCCAAAAGCCTTTTGCCCAGGGCCTGTCTCTGGCCAAGGCCAGGCCGCCAACTGGATGACAGCATTACCTGGACCTGTCTTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574988.1
CDS CCA 90 bp ACACAGGACAGGGCAAGACAGGTCCAGGTAATGCTGTCATCCAGTTaGCGGCCTGGCCTTGGCCAGAGACAGGCCCTGGGCAAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: TQDRARQVQVMLSSS*RPGLGQRQALGKRL
Trigger: AAGCCTTTTGCCCAGGGCCTGTCTCTGGCCAAGGCCAGGCCGCCAACTGGATGACAGCATTACCTGGACCTGTCTTGCCCTGTCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574988.1
CDS-3UTR CAA 90 bp TCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCGTCAGCACGAACTTATaGAACTGCAGGTGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: SEAAELPVSVSWKKQLQPVSTNL*NCRCGG
Trigger: GCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGAC...GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GATCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCACAGCGCTGCCCCCTaGGTGGCACATAAAGAGGTG +
Preference number: 5 (lower is better)
Translates to: DLRPLSSLCQFPGRSSCSHSAAP*VAHKEV
Trigger: CACCTCTTTATGTGCCACCAAGGGGGCAGCGCTGTG...GCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000318782.9
CDS-3UTR CAA 90 bp GAACTCTCAGAGCAAGACGTGACCCCAGAGTCCCTCTCTGGTCTAACCCCACAGAGGGCCCCAAGGGTGTaGACAAGGCAGACCCCACAC +
Preference number: 5 (lower is better)
Translates to: ELSEQDVTPESLSGLTPQRAPRV*TRQTPH
Trigger: GTGTGGGGTCTGCCTTGTCAACACCCTTGGGGCCCT...CTGTGGGGTTAGACCAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000318782.9
CDS-3UTR CAA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCCCCCTTGCAGACGAGTaGGGAGGAACACCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGPLADE*GGTPGV
Trigger: AACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CAA 90 bp TTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGGCGGCCTGGCAGGACTaGAACTCTCAGAGCAAGACG +
Preference number: 5 (lower is better)
Translates to: LGGTPGVANSRRLLWAGWAAWQD*NSQSKT
Trigger: CGTCTTGCTCTGAGAGTTCAAGTCCTGCCAGGCCGC...CCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCGGGTACCTGGAGCTGTaGGGAGTATGGCACTCAAGG +
Preference number: 5 (lower is better)
Translates to: GTPGVANSRRLLWAGWHGGYLEL*GVWHSR
Trigger: CCTTGAGTGCCATACTCCCAACAGCTCCAGGTACCC...GCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGTCAGCACGAACTTATaGAACTGCAGGTGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: EEHLVLLTLGGCCGQAGMVSTNL*NCRCGG
Trigger: GCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGAC...CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGGCACCCCTTGCAGACGAGTaGGGAGGAACACCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: EHLVLLTLGGCCGQAGMAPLADE*GGTPGV
Trigger: AACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG...TGCCATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CAA 90 bp TCCTTCCCCTCCTTTGAGCCTCGGAACCTCCTCAGCCTGTTTGAGGACACCCTACAAGGAGCCAGCCCCTaGCAGACGAGTTGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SFPSFEPRNLLSLFEDTLQGASP*QTSWEE
Trigger: TTCCTCCCAACTCGTCTGCAAGGGGCTGGCTCCTTG...TAGGGTGTCCTCAAACAGGCTGAGGAGGTTCCGAGGCTCAAAGGAGGGGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATTGGGAGCACCCAAGCTaGCTCATGTGGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHWEHPS*LMWQHG
Trigger: GCCATGTTGCCACATGAGCAAGCTTGGGTGCTCCCA...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTCCCTGGACACCCTCCTaGTCTCGCCTGCCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPPWTPS*SRLPSC
Trigger: GCAGGAGGGCAGGCGAGACAAGGAGGGTGTCCAGGG...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS CCA 90 bp AAGACAGGTCCAGGTAATGCTGTCATCCAGTTGGCGGCCTGGCCTTaGCCAGAGACAGGCCCTGGGCAAAAGGCTTTTGGCACTGGTTAC +
Preference number: 5 (lower is better)
Translates to: KTGPGNAVIQLAAWP*PETGPGQKAFGTGY
Trigger: GTAACCAGTGCCAAAAGCCTTTTGCCCAGGGCCTGTCTCTGGCCAAGGCCAGGCCGCCAACTGGATGACAGCATTACCTGGACCTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574988.1
CDS-3UTR CAA 90 bp CCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCGTCAGCACGAACTTATaGAACTGCAGGTGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: PLQTSWEEHLVLLTLGGCVSTNL*NCRCGG
Trigger: GCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGAC...GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTAGGGCCCCAAGGGTGTaGACAAGGCAGACCCCACAC +
Preference number: 5 (lower is better)
Translates to: LQTSWEEHLVLLTLGGCCRAPRV*TRQTPH
Trigger: GTGTGGGGTCTGCCTTGTCAACACCCTTGGGGCCCT...ACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000576565.1
CDS-3UTR CAA 90 bp TTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGGAGGAACACCTGGTGTaGCTAACTCTAGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LGGTPGVANSRRLLWAGWEEHLV*LTLGGC
Trigger: GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC...CCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CAA 90 bp CCAGAGTCCCTCTCTGGTCTAACCCCACAGGTCACAGAGGGTAAAGAGGTCCCACCCCTTGCAGACGAGTaGGGAGGAACACCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: PESLSGLTPQVTEGKEVPPLADE*GGTPGV
Trigger: AACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG...TGGGACCTCTTTACCCTCTGTGACCTGTGGGGTTAGACCAGAGAGGGACTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTAGGCAGGGAAGGAAGTaGGAGCGCCACGGCGTGGGT +
Preference number: 5 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPRQGRK*ERHGVG
Trigger: ACCCACGCCGTGGCGCTCCAACTTCCTTCCCTGCCT...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TCCTTCCCCTCCTTTGAGCCTCGGAACCTCCTCAGCCTGTTTGAGGACACCCTAGGGTACCTGGAGCTGTaGGGAGTATGGCACTCAAGG +
Preference number: 5 (lower is better)
Translates to: SFPSFEPRNLLSLFEDTLGYLEL*GVWHSR
Trigger: CCTTGAGTGCCATACTCCCAACAGCTCCAGGTACCC...TAGGGTGTCCTCAAACAGGCTGAGGAGGTTCCGAGGCTCAAAGGAGGGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GAACTCTCAGAGCAAGACGTGACCCCAGAGTCCCTCTCTGGTCTAACCCCACAGTGGGAGCACCCAAGCTaGCTCATGTGGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: ELSEQDVTPESLSGLTPQWEHPS*LMWQHG
Trigger: GCCATGTTGCCACATGAGCAAGCTTGGGTGCTCCCA...CTGTGGGGTTAGACCAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GAGCACCCAAGCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATAGGGCCCCAAGGGTGTaGACAAGGCAGACCCCACAC +
Preference number: 5 (lower is better)
Translates to: EHPSLLMWQHGPSCPFIDRAPRV*TRQTPH
Trigger: GTGTGGGGTCTGCCTTGTCAACACCCTTGGGGCCCT...ATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGCTTGGGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000318782.9
CDS-3UTR CAA 90 bp AGCCCCTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCGAGGAACACCTGGTGTaGCTAACTCTAGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: SPLQTSWEEHLVLLTLGGEEHLV*LTLGGC
Trigger: GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC...GCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CAA 90 bp CTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGGAGGAACACCTGGTGTaGCTAACTCTAGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LADELGGTPGVANSRRLLEEHLV*LTLGGC
Trigger: GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC...CAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000576565.1
CDS-3UTR CAA 90 bp AGGGAAGAACGGGTGAACAGGGCTCCTGCTGAGACATCTCATGAGCTGGAAGCAGAGGAACACCTGGTGTaGCTAACTCTAGGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: REERVNRAPAETSHELEAEEHLV*LTLGGC
Trigger: GCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC...TGCTTCCAGCTCATGAGATGTCTCAGCAGGAGCCCTGTTCACCCGTTCTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAAGGGTACCTGGAGCTGTaGGGAGTATGGCACTCAAGG +
Preference number: 5 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAEGYLEL*GVWHSR
Trigger: CCTTGAGTGCCATACTCCCAACAGCTCCAGGTACCC...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTTGGGAGCACCCAAGCTaGCTCATGTGGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: LQTSWEEHLVLLTLGGCCWEHPS*LMWQHG
Trigger: GCCATGTTGCCACATGAGCAAGCTTGGGTGCTCCCA...ACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATGTGCACCAAGTTTTTATaGTCCCTGACTGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: EEHLVLLTLGGCCGQAGMCTKFL*SLTVAP
Trigger: GGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCA...CATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GCTGCTTTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTCCCCTTGCAGACGAGTaGGGAGGAACACCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: AAFRVHQVFIVPDCGSLPPLADE*GGTPGV
Trigger: AACACCAGGTGTTCCTCCCAACTCGTCTGCAAGGGG...AGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAAAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TCTGAGGCCGCTGAGCTCCCTGTGTCAGTTTCCTGGAAGAAGCAGCTGCAGCCCCTTCCTGTCCCTTTATaGATGTCATCCAGGGTCTTA +
Preference number: 5 (lower is better)
Translates to: SEAAELPVSVSWKKQLQPLPVPL*MSSRVL
Trigger: TAAGACCCTGGATGACATCAATAAAGGGACAGGAAG...GGGCTGCAGCTGCTTCTTCCAGGAAACTGACACAGGGAGCTCAGCGGCCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TCCTTCCCCTCCTTTGAGCCTCGGAACCTCCTCAGCCTGTTTGAGGACACCCTATGCACCAAGTTTTTATaGTCCCTGACTGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SFPSFEPRNLLSLFEDTLCTKFL*SLTVAP
Trigger: GGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCA...TAGGGTGTCCTCAAACAGGCTGAGGAGGTTCCGAGGCTCAAAGGAGGGGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TTCAGAGTGCACCAAGTTTTTATTGTCCCTGACTGTGGCTCCCTGCCTGTTTGTGCGGCCTGGCAGGACTaGAACTCTCAGAGCAAGACG +
Preference number: 5 (lower is better)
Translates to: FRVHQVFIVPDCGSLPVCAAWQD*NSQSKT
Trigger: CGTCTTGCTCTGAGAGTTCAAGTCCTGCCAGGCCGC...ACAAACAGGCAGGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCACTCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCATCTTCCTGTCCCTTTATaGATGTCATCCAGGGTCTTA +
Preference number: 5 (lower is better)
Translates to: GGTPGVANSRRLLWAGWHLPVPL*MSSRVL
Trigger: TAAGACCCTGGATGACATCAATAAAGGGACAGGAAG...ATGCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTTCTCTCCCGTCGCCCTaGAAAGCTGGGGCCCCTCGG +
Preference number: 5 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLSLPSP*KAGAPR
Trigger: CCGAGGGGCCCCAGCTTTCAAGGGCGACGGGAGAGA...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TTATTGATGTCATCCAGGGTCTTAACGCCCCTGAGGCTGAGCCCTGCTGCAGAACCAGATGGAAGGACTTaGAAGGCTGTCCAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: LLMSSRVLTPLRLSPAAEPDGRT*KAVQVL
Trigger: CAGCACTTGGACAGCCTTCAAAGTCCTTCCATCTGG...TTCTGCAGCAGGGCTCAGCCTCAGGGGCGTTAAGACCCTGGATGACATCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTCCAGATGGAAGGACTTaGAAGGCTGTCCAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: LQTSWEEHLVLLTLGGCCPDGRT*KAVQVL
Trigger: CAGCACTTGGACAGCCTTCAAAGTCCTTCCATCTGG...ACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp GCTTGCTCATGTGGCAACATGGCCCTTCCTGTCCCTTTATTGATGTCATCCAGGCCAGATGGAAGGACTTaGAAGGCTGTCCAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: ACSCGNMALPVPLLMSSRPDGRT*KAVQVL
Trigger: CAGCACTTGGACAGCCTTCAAAGTCCTTCCATCTGG...CCTGGATGACATCAATAAAGGGACAGGAAGGGCCATGTTGCCACATGAGCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp CTTGCAGACGAGTTGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGCTTCCTGTCCCTTTATaGATGTCATCCAGGGTCTTA +
Preference number: 5 (lower is better)
Translates to: LADELGGTPGVANSRRLLLPVPL*MSSRVL
Trigger: TAAGACCCTGGATGACATCAATAAAGGGACAGGAAG...CAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCAACTCGTCTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp TGGGAGGAACACCTGGTGTTGCTAACTCTAGGAGGCTGCTGTGGGCAGGCTGGCTCTAATAAAAAGTATTaGAACCTTGGGAGCACCCAA +
Preference number: 5 (lower is better)
Translates to: WEEHLVLLTLGGCCGQAGSNKKY*NLGSTQ
Trigger: TTGGGTGCTCCCAAGGTTCAAATACTTTTTATTAGA...GCCAGCCTGCCCACAGCAGCCTCCTAGAGTTAGCAACACCAGGTGTTCCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTCACAGCGCTGCCCCCTaGGTGGCACATAAAGAGGTG +
Preference number: 5 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLHSAAP*VAHKEV
Trigger: CACCTCTTTATGTGCCACCAAGGGGGCAGCGCTGTG...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000318782.9
CDS-3UTR CAA 90 bp GAACTCTCAGAGCAAGACGTGACCCCAGAGTCCCTCTCTGGTCTAACCCCACAGTCTAATAAAAAGTATTaGAACCTTGGGAGCACCCAA +
Preference number: 5 (lower is better)
Translates to: ELSEQDVTPESLSGLTPQSNKKY*NLGSTQ
Trigger: TTGGGTGCTCCCAAGGTTCAAATACTTTTTATTAGA...CTGTGGGGTTAGACCAGAGAGGGACTCTGGGGTCACGTCTTGCTCTGAGAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp AGGGAAGAACGGGTGAACAGGGCTCCTGCTGAGACATCTCATGAGCTGGAAGCATCTAATAAAAAGTATTaGAACCTTGGGAGCACCCAA +
Preference number: 5 (lower is better)
Translates to: REERVNRAPAETSHELEASNKKY*NLGSTQ
Trigger: TTGGGTGCTCCCAAGGTTCAAATACTTTTTATTAGA...TGCTTCCAGCTCATGAGATGTCTCAGCAGGAGCCCTGTTCACCCGTTCTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS-3UTR CAA 90 bp AACTCCCATGGTCTTCTCTGCCTGGCCGTGTCTAATAAAAAGTATTTGAACCTTTGCACCAAGTTTTTATaGTCCCTGACTGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: NSHGLLCLAVSNKKYLNLCTKFL*SLTVAP
Trigger: GGGAGCCACAGTCAGGGACAATAAAAACTTGGTGCA...AAGGTTCAAATACTTTTTATTAGACACGGCCAGGCAGAGAAGACCATGGGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS TCA 72 bp CGCGCCGGGGCGGAGGCTGGGGACGCACCGGACGCCTaGGCGCACTGCGGTCGGCTCCGCCAAGGCAGACGC +
Preference number: 6 (lower is better)
Translates to: RAGAEAGDAPDA*AHCGRLRQGRR
Trigger: GCGTCTGCCTTGGCGGAGCCGACCGCAGTGCGCTCAGGCGTCCGGTGCGTCCCCAGCCTCCGCCCCGGCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000318782.9
CDS GCA 72 bp TCCTCAGTGGGGCCGCAGCGCGGGAAGGCCCATCACTaGCTGGCGCCCGGCGCCCGGCGCCCACCCATCGCC +
Preference number: 6 (lower is better)
Translates to: SSVGPQRGKAHH*LAPGARRPPIA
Trigger: GGCGATGGGTGGGCGCCGGGCGCCGGGCGCCAGGCAGTGATGGGCCTTCCCGCGCTGCGGCCCCACTGAGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293978.12
ENST00000318782.9
CDS CCA 72 bp CGCCGCAGGGACAGCTCGCGGCGGCGGCGGCGGCGGTaGCCGGTAGTCTCTCTGCAGCCAGGAGGACGGGCG +
Preference number: 6 (lower is better)
Translates to: RRRDSSRRRRRR*PVVSLQPGGRA
Trigger: CGCCCGTCCTCCTGGCTGCAGAGAGACTACCGGCCACCGCCGCCGCCGCCGCCGCGAGCTGTCCCTGCGGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293978.12
CDS GCA 72 bp CGCCATGGTCCGCACCGCGCGGGCAGCCCGTGCTCCTaGTGTCCCCGAGCCTCCTCCTCAGTGGGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: RHGPHRAGSPCS*CPRASSSVGPQ
Trigger: CTGCGGCCCCACTGAGGAGGAGGCTCGGGGACAGCAGGAGCACGGGCTGCCCGCGCGGTGCGGACCATGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS CCA 72 bp GCTGGCATGGCAGCTCAGTCCCGGGGACAGGCGTGGTaGGCAGCCCAGAGCAGGTCGGGCACGACGCCGGCG +
Preference number: 6 (lower is better)
Translates to: AGMAAQSRGQAW*AAQSRSGTTPA
Trigger: CGCCGGCGTCGTGCCCGACCTGCTCTGGGCTGCCCACCACGCCTGTCCCCGGGACTGAGCTGCCATGCCAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000574988.1
ENST00000576565.1
CDS CCA 72 bp CAGGCTGGCATGGCAGCTCAGTCCCGGGGACAGGCGTaGTGGGCAGCCCAGAGCAGGTCGGGCACGACGCCG +
Preference number: 6 (lower is better)
Translates to: QAGMAAQSRGQA*WAAQSRSGTTP
Trigger: CGGCGTCGTGCCCGACCTGCTCTGGGCTGCCCACCACGCCTGTCCCCGGGACTGAGCTGCCATGCCAGCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000574988.1
ENST00000576565.1
CDS GCA 72 bp TGGGCAGCCCAGAGCAGGTCGGGCACGACGCCGGCGTaGAGCTGCAGGATGGAGCCCACGCTCAGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: WAAQSRSGTTPA*SCRMEPTLSRC
Trigger: GCACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGCACGCCGGCGTCGTGCCCGACCTGCTCTGGGCTGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000574988.1
ENST00000576565.1
CDS CAA 90 bp CCCGAGCCGCTGCTGGCGGGCCGGTACCCGGTCAGCACGAACTTATaGAACTGCAGGTGCGGCGGCGAGCTGGCCCAGTCCAGCAGGCGC +
Preference number: 6 (lower is better)
Translates to: PEPLLAGRYPVSTNL*NCRCGGELAQSSRR
Trigger: GCGCCTGCTGGACTGGGCCAGCTCGCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGACCGGGTACCGGCCCGCCAGCAGCGGCTCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS GCA 72 bp CGGTACCCGGTCAGCACGAACTTATTGAACTGCAGGTaGGGCGGCGAGCTGGCCCAGTCCAGCAGGCGCGGC +
Preference number: 6 (lower is better)
Translates to: RYPVSTNLLNCR*GGELAQSSRRG
Trigger: GCCGCGCCTGCTGGACTGGGCCAGCTCGCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGACCGGGTACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS GCA 72 bp GCGGGCCGGTACCCGGTCAGCACGAACTTATTGAACTaGAGGTGCGGCGGCGAGCTGGCCCAGTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: AGRYPVSTNLLN*RCGGELAQSSR
Trigger: CCTGCTGGACTGGGCCAGCTCGCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGACCGGGTACCGGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS GCA 72 bp GCAGGTAGAAGAGGCTGCGCAGGCAGCCCGAGCCGCTaGTGGCGGGCCGGTACCCGGTCAGCACGAACTTAT +
Preference number: 6 (lower is better)
Translates to: AGRRGCAGSPSR*WRAGTRSARTY
Trigger: ATAAGTTCGTGCTGACCGGGTACCGGCCCGCCAGCAGCGGCTCGGGCTGCCTGCGCAGCCTCTTCTACCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS GCA 72 bp CCCCGGGCCCCAAATACCAGTAGGCGGGCAGCAGCCTaGCATCCAAATGCCCGGAGCCGAGCACTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: PRAPNTSRRAAA*HPNARSRALVE
Trigger: CTCCACCAGTGCTCGGCTCCGGGCATTTGGATGGCAGGCTGCTGCCCGCCTACTGGTATTTGGGGCCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000574988.1
ENST00000576565.1
CDS CCA 72 bp GCCATCCTTGCCCAGCTGACCCCAGGGCATGGTCATTaGCACCAGCACCAGGAAGCCCAGCAGGGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: AILAQLTPGHGH*HQHQEAQQGQP
Trigger: GGGCTGGCCCTGCTGGGCTTCCTGGTGCTGGTGCCAATGACCATGCCCTGGGGTCAGCTGGGCAAGGATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318782.9
ENST00000574988.1
ENST00000576565.1
CDS CAA 72 bp CTGCTGGCGGGCCGGTACCCGGTCAGCACGAACTTATaGAACTGCAGGTGCGGCGGCGAGCTGGCCCAGTCC +
Preference number: 6 (lower is better)
Translates to: LLAGRYPVSTNL*NCRCGGELAQS
Trigger: GGACTGGGCCAGCTCGCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGACCGGGTACCGGCCCGCCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS TCA 72 bp TGCTGGCGGGCCGGTACCCGGTCAGCACGAACTTATTaGACTGCAGGTGCGGCGGCGAGCTGGCCCAGTCCA +
Preference number: 6 (lower is better)
Translates to: CWRAGTRSARTY*TAGAAASWPSP
Trigger: TGGACTGGGCCAGCTCGCCGCCGCACCTGCAGTTCAATAAGTTCGTGCTGACCGGGTACCGGCCCGCCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS GCA 72 bp AGATGTTGCCCAGTTCGTTGTGCAGGTAGAAGAGGCTaGGCAGGCAGCCCGAGCCGCTGCTGGCGGGCCGGT +
Preference number: 6 (lower is better)
Translates to: RCCPVRCAGRRG*AGSPSRCWRAG
Trigger: ACCGGCCCGCCAGCAGCGGCTCGGGCTGCCTGCGCAGCCTCTTCTACCTGCACAACGAACTGGGCAACATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
CDS GCA 72 bp ACGGGCTACATTTACCAGTCCCCCAAGCAGCGCCAGTaGGTCCATGCGCAGGTAGCAGGGCAGGGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: TGYIYQSPKQRQ*VHAQVAGQGAW
Trigger: CCAGGCTCCCTGCCCTGCTACCTGCGCATGGACGCACTGGCGCTGCTTGGGGGACTGGTAAATGTAGCCCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000574988.1
ENST00000576565.1
CDS CAA 72 bp CAGGGCGAGGAGCCGGGCGTACACAGCGCTGCCCCCTaGGTGGCACATAAAGAGGTGATAGAGCACGGAGCC +
Preference number: 6 (lower is better)
Translates to: QGEEPGVHSAAP*VAHKEVIEHGA
Trigger: GGCTCCGTGCTCTATCACCTCTTTATGTGCCACCAAGGGGGCAGCGCTGTGTACGCCCGGCTCCTCGCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000574988.1
ENST00000576565.1
CDS CAA 90 bp ACACATGTCCAGGGCGAGGAGCCGGGCGTACACAGCGCTGCCCCCTaGGTGGCACATAAAGAGGTGATAGAGCACGGAGCCTGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: THVQGEEPGVHSAAP*VAHKEVIEHGACRG
Trigger: CCCCCTGCAGGCTCCGTGCTCTATCACCTCTTTATGTGCCACCAAGGGGGCAGCGCTGTGTACGCCCGGCTCCTCGCCCTGGACATGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318782.9
ENST00000574988.1
ENST00000576565.1
CDS CCA 72 bp AGGGCAAGACAGGTCCAGGTAATGCTGTCATCCAGTTaGCGGCCTGGCCTTGGCCAGAGACAGGCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: RARQVQVMLSSS*RPGLGQRQALG
Trigger: GCCCAGGGCCTGTCTCTGGCCAAGGCCAGGCCGCCAACTGGATGACAGCATTACCTGGACCTGTCTTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574988.1
CDS CAA 90 bp ACACATGTCCAGGGCGAGGAGCCGGGCGTACACAGCGCTGCCCCCTaGGTGGCACATAAAGAGGTGATAGAGCACGGAGCCGTGCGTGTA +
Preference number: 6 (lower is better)
Translates to: THVQGEEPGVHSAAP*VAHKEVIEHGAVRV
Trigger: TACACGCACGGCTCCGTGCTCTATCACCTCTTTATGTGCCACCAAGGGGGCAGCGCTGTGTACGCCCGGCTCCTCGCCCTGGACATGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293978.12
CDS TCA 72 bp GCAGCTGCAGGATGGAGCCCACGCTCAGCAGGTGCATaGTCTGGTGGGAGTTGCCCCAGTAGTCAAAGCGGC +
Preference number: 6 (lower is better)
Translates to: AAAGWSPRSAGA*SGGSCPSSQSG
Trigger: GCCGCTTTGACTACTGGGGCAACTCCCACCAGATCATGCACCTGCTGAGCGTGGGCTCCATCCTGCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293978.12
ENST00000318782.9
ENST00000572687.1
ENST00000574988.1
ENST00000576565.1
CDS GCA 72 bp GGAAGCCCAGCAGGGCCAGCCCGTGCGTGTAGATGTTaGCCAGTTCGTTGTGCAGGTAGAAGAGGCTGCGCA +
Preference number: 6 (lower is better)
Translates to: GSPAGPARACRC*PVRCAGRRGCA
Trigger: TGCGCAGCCTCTTCTACCTGCACAACGAACTGGGCAACATCTACACGCACGGGCTGGCCCTGCTGGGCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318782.9
CDS CAA 90 bp AACACAGGACAGGGCAAGACAGGTCCAGGTAATGCTGTCATCCAGTaGGCGGCCTGGCCTTGGCCAGAGACAGGCCCTGGGCAAAAGGCT +
Preference number: 6 (lower is better)
Translates to: NTGQGKTGPGNAVIQ*AAWPWPETGPGQKA
Trigger: AGCCTTTTGCCCAGGGCCTGTCTCTGGCCAAGGCCAGGCCGCCAACTGGATGACAGCATTACCTGGACCTGTCTTGCCCTGTCCTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574988.1
CDS GCA 72 bp AGAGGTGATAGAGCACGGAGCCGTGCGTGTAGATGTTaGCCAGTTCGTTGTGCAGGTAGAAGAGGCTGCGCA +
Preference number: 6 (lower is better)
Translates to: RGDRARSRACRC*PVRCAGRRGCA
Trigger: TGCGCAGCCTCTTCTACCTGCACAACGAACTGGGCAACATCTACACGCACGGCTCCGTGCTCTATCACCTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293978.12