RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PAPLN (Homo sapiens)

Ensembl gene IDs: ENSG00000100767

Ensembl transcript IDs: ENST00000216658.9, ENST00000340738.9, ENST00000554301.5, ENST00000554314.1, ENST00000554527.1, ENST00000555035.1, ENST00000555123.5, ENST00000555445.5, ENST00000555700.1, ENST00000557061.5, ENST00000559759.1, ENST00000644200.2

Found 1813 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGCCCAGCAGCCCCCGCTTGGCCAAAGTCCTGAGCTGGGTCCCTaGGCTGAGGGAAGCGGCTCAGCTCAGCCTCAGACAGCACGGCCA +
Preference number: 1 (lower is better)
Translates to: GAQQPPLGQSPELGP*AEGSGSAQPQTARP
Trigger: TGGCCGTGCTGTCTGAGGCTGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCTGGGCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR TCA 90 bp GGGCGGTGGGTGCTGGTGAGACCACCTTCACCTCGGTGCTGCGGCTaGCTGCCTGGCTCCCCTGGTAGGCACTGCACGTGTAGGAGCCCT +
Preference number: 1 (lower is better)
Translates to: GRWVLVRPPSPRCCG*LPGSPGRHCTCRSP
Trigger: AGGGCTCCTACACGTGCAGTGCCTACCAGGGGAGCCAGGCAGTCAGCCGCAGCACCGAGGTGAAGGTGGTCTCACCAGCACCCACCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR GCA 90 bp TGGGATTCCGGGGCAGTGTCGTCTGAGCAGGAGAGCCGCACCAACTaGCCCAGGGCTGCCTGCACCAACGAGGGCTCCACACCTGCCAAG +
Preference number: 1 (lower is better)
Translates to: WDSGAVSSEQESRTN*PRAACTNEGSTPAK
Trigger: CTTGGCAGGTGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCGGAATCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR CCA 90 bp GGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACTaGCATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGT +
Preference number: 1 (lower is better)
Translates to: GSLRHGRSSGSAGLD*HPPPGAGSGPNAAC
Trigger: ACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR TCA 90 bp TGCCACAGCTGTAGGTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATaGTCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCAGCGGAGG +
Preference number: 1 (lower is better)
Translates to: CHSCRCPRPLPAGGG*SGIRRTAACACQRR
Trigger: CCTCCGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
3UTR TCA 90 bp GCCATCTTTCTGCCAGGCAGCCTGGGATTCCGGGGCAGTGTCGTCTaGGCAGGAGAGCCGCACCAACTGCCCCAGGGCTGCCTGCACCAA +
Preference number: 1 (lower is better)
Translates to: AIFLPGSLGFRGSVV*AGEPHQLPQGCLHQ
Trigger: TTGGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR GCA 90 bp GGATCAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTaGCAGGGTCCCTGGGCTGGGCGGTGGGTGCTGGTGAGACCACCT +
Preference number: 1 (lower is better)
Translates to: GSNHSWPALAGRRSP*QGPWAGRWVLVRPP
Trigger: AGGTGGTCTCACCAGCACCCACCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR CCA 90 bp CAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGCCAGCTCTGGCTaGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGTGGGT +
Preference number: 1 (lower is better)
Translates to: QSWACRIKSQLASSG*STQSLPGSLGWAVG
Trigger: ACCCACCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGCCCAGCTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR CCA 90 bp GCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGCCAGCTCTaGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGT +
Preference number: 1 (lower is better)
Translates to: ATKLGLQDQITVGQL*LVDAVPARVPGLGG
Trigger: ACCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR GCA 90 bp GGATCAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTaGCAGGGTCCCTGGGCTGGGCGGTGGGTGCTGGGAGAAGAGACA +
Preference number: 1 (lower is better)
Translates to: GSNHSWPALAGRRSP*QGPWAGRWVLGEET
Trigger: TGTCTCTTCTCCCAGCACCCACCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555123.5
3UTR TCA 90 bp TGCCACAGCTGTAGGTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATaGTCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCAGAGGAGA +
Preference number: 1 (lower is better)
Translates to: CHSCRCPRPLPAGGG*SGIRRTAACACQRR
Trigger: TCTCCTCTGACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR CCA 90 bp TGCCTGTCAGAGGAGATGGGCTGGCCATCTTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCGTCTGAGCAGGAGAGCCGCACCAAC +
Preference number: 1 (lower is better)
Translates to: CLSEEMGWPSFCQAA*DSGAVSSEQESRTN
Trigger: GTTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR GCA 90 bp AACTGCAGCCTGTGCCTGTCAGAGGAGATGGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCCGGGGCAGTGTCGTCTGAGCAGGAG +
Preference number: 1 (lower is better)
Translates to: NCSLCLSEEMGWPSF*QAAWDSGAVSSEQE
Trigger: CTCCTGCTCAGACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGCACAGGCTGCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR TCA 90 bp CACTGCACGTGTAGGAGCCCTCATCCCTGGCCCGCAAGTTGTAAATaGGCAGCGTGCCATCTGGGGACTGGTGGACACGGTGGCCATCAG +
Preference number: 1 (lower is better)
Translates to: HCTCRSPHPWPASCK*AACHLGTGGHGGHQ
Trigger: CTGATGGCCACCGTGTCCACCAGTCCCCAGATGGCACGCTGCTCATTTACAACTTGCGGGCCAGGGATGAGGGCTCCTACACGTGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR CCA 90 bp AATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTaGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGG +
Preference number: 1 (lower is better)
Translates to: NTHCHKAGPAGSNHS*PALAGRRSPCQGPW
Trigger: CCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR CCA 90 bp CCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACGTGAACAGCTaGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGG +
Preference number: 1 (lower is better)
Translates to: PTARWAEREAGNVNS*HSRSWSNTHCHKAG
Trigger: CCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
3UTR CCA 90 bp TATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATaGGCTGAGCGTGAGGCTGGAAACGTGAACAGCTGGCACAGCAGA +
Preference number: 1 (lower is better)
Translates to: YFGLGLELAFIPTAR*AEREAGNVNSWHSR
Trigger: TCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
3UTR TCA 90 bp TGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATaGACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTC +
Preference number: 1 (lower is better)
Translates to: CHCTEQAGQLYTGVR*TVTARFACWPQEGF
Trigger: GAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR TCA 90 bp CCAGGCATGGTGATAGGCATCTGTAATCCTAGCTACTCAGAAGGCTaGCACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAG +
Preference number: 1 (lower is better)
Translates to: PGMVIGICNPSYSEG*HRRIKNPGDGGCSE
Trigger: CTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTACAGATGCCTATCACCATGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR GCA 90 bp GGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTaGCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGCCAGCT +
Preference number: 1 (lower is better)
Translates to: GNVNSWHSRSWSNTH*HKAGPAGSNHSWPA
Trigger: AGCTGGCCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR GCA 90 bp TGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACAGCCAGATTTaGATGTTGGCCTCAGGAGGGCTTCAAGGTCCAACATCTCGACGT +
Preference number: 1 (lower is better)
Translates to: WSALHRCQMNRHSQI*MLASGGLQGPTSRR
Trigger: ACGTCGAGATGTTGGACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGTAAAGCTGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR TCA 90 bp CTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTaGAGGCTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTA +
Preference number: 1 (lower is better)
Translates to: LENSSLWLCQRCKHC*RLQREAGNWLPLRL
Trigger: TAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR GCA 90 bp CTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATaGCCTTTAGAAAACAAACAGGTGTTAACTTTGAAATCATTACAC +
Preference number: 1 (lower is better)
Translates to: LILAQNTSLIQQDLA*PLENKQVLTLKSLH
Trigger: GTGTAATGATTTCAAAGTTAACACCTGTTTGTTTTCTAAAGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp AGGCTGCCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGCGCGGCCTGGCCGGGTaGTGCCACAGCTGTAGGTGC +
Preference number: 2 (lower is better)
Translates to: RLPISLPLDGWGREAFGTRGLAG*CHSCRC
Trigger: GCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCG...CGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CCA 90 bp CTGCCTGGCTCCCCTGGTAGGCACTGCACGTGTAGGAGCCCTCATCCCTGGCCCCTGCCACTCGATGGCTaGGGGCGGGAAGCCTTCGGC +
Preference number: 2 (lower is better)
Translates to: LPGSPGRHCTCRSPHPWPLPLDG*GREAFG
Trigger: GCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAG...GGGCCAGGGATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGAGCCAGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR GCA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCCCGCGTCCTCTGCCTaGAGGGGGTGGATGATCAGG +
Preference number: 2 (lower is better)
Translates to: PISLPLDGWGREAFGTAGPASSA*RGWMIR
Trigger: CCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGG...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR GCA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGAGGGATCCGTCGAACTaGAGCCTGTGCCTGTCAGAG +
Preference number: 2 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRRDPSN*SLCLSE
Trigger: CTCTGACAGGCACAGGCTGCAGTTCGACGGATCCCT...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGACCCGGGGCTGGTTCTaGTCCAAACGCAGCCTGTTT +
Preference number: 2 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRTRGWF*SKRSLF
Trigger: AAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGT...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CCA 90 bp CATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGCTGGCCTGGACTaGCATCCACCACCCGGGGCT +
Preference number: 2 (lower is better)
Translates to: HLSATRWLGAGSLRHGRSSAGLD*HPPPGA
Trigger: AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGA...TGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCG +
Preference number: 2 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWFCQAA*DSGAVS
Trigger: CGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAA...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp CCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCCGAAGTTGGATCTTCTaGGAGTCGCGGCCTGGCCGG +
Preference number: 2 (lower is better)
Translates to: PSLCHSMAGGGKPSARQVRSWIF*ESRPGR
Trigger: CCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCG...GACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR GCA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTAGGGATCCGTCGAACTaGAGCCTGTGCCTGTCAGCG +
Preference number: 2 (lower is better)
Translates to: PISLPLDGWGREAFGTAGRDPSN*SLCLSA
Trigger: CGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCT...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
3UTR-3UTR GCA 90 bp CACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGGTGCAACTGCCCCAGGGCTaGCTGCACCAACGAGGGCTC +
Preference number: 2 (lower is better)
Translates to: HHPGLVLVQTQPVCRLWVQLPQG*LHQRGL
Trigger: GAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTG...CACCCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp CTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACTCAGAGGAGATGGGCTaGCCATCTTTCTGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: LGAGSLRHGRSSGSAGLDSEEMG*PSFCQA
Trigger: TGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGA...GTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp GGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGACTGCCACTCGATGGCTaGGGGCGGGAAGCCTTCGGC +
Preference number: 2 (lower is better)
Translates to: GLELAFIPTARWAEREAGLPLDG*GREAFG
Trigger: GCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAG...TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR TCA 90 bp CGTGTAGGAGCCCTCATCCCTGGCCCGCAAGTTGTAAATGAGCAGCGTGCCATCGCTGGGTCCCTGGGCTaGGGGAAGCGGCTCAGCTCA +
Preference number: 2 (lower is better)
Translates to: RVGALIPGPQVVNEQRAIAGSLG*GKRLSS
Trigger: TGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGC...GATGGCACGCTGCTCATTTACAACTTGCGGGCCAGGGATGAGGGCTCCTACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR GCA 90 bp CTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGTAGAAGCCGCCATCTTCCGCGGCCTGGCCGGGTaGTGCCACAGCTGTAGGTGC +
Preference number: 2 (lower is better)
Translates to: LVSVLPIESDTGVEAAIFRGLAG*CHSCRC
Trigger: GCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCG...GAAGATGGCGGCTTCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR GCA 90 bp CATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCGAACTGCAGCCTGTaGCTGTCAGAGGAGATGGGC +
Preference number: 2 (lower is better)
Translates to: HLSATRWLGAGSLRHGRSSNCSL*LSEEMG
Trigger: GCCCATCTCCTCTGACAGGCACAGGCTGCAGTTCGA...TGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp CACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGGTGGCCTGTCAGCGGAGGTaGAGGGAGCTGTCACGTGAA +
Preference number: 2 (lower is better)
Translates to: HHPGLVLVQTQPVCRLWVACQRR*RELSRE
Trigger: TTCACGTGACAGCTCCCTCCACCTCCGCTGACAGGC...CACCCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216658.9
3UTR-3UTR GCA 90 bp CTGAGCTGGACCCATCGCTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGTGCCACAGCTGTAGGTaGCCGCGTCCTCTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: LSWTHRWSRSCPLKATQVCHSCR*PRPLPA
Trigger: TGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCA...CACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR CCA 90 bp GCCTGCAGGATCAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCGAAGTTGGATCTTCTaGGAGTCGCGGCCTGGCCGG +
Preference number: 2 (lower is better)
Translates to: ACRIKSQLASSGWSTQSLRSWIF*ESRPGR
Trigger: CCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCG...CAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CCA 90 bp GTAGAAGCCGCCATCTTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGCCGGATCCGCTGGCCTaGACTGGCATCCACCACCCG +
Preference number: 2 (lower is better)
Translates to: VEAAIFYSHSANDQGAIRPDPLA*TGIHHP
Trigger: CGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGG...CCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAAGATGGCGGCTTCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR TCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGCCTGCAGGGGGTGGATaGTCAGGGATCCGTCGAACT +
Preference number: 2 (lower is better)
Translates to: GLGLELAFIPTARWAEREPAGGG*SGIRRT
Trigger: AGTTCGACGGATCCCTGATCATCCACCCCCTGCAGG...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR GCA 90 bp GTAGAAGCCGCCATCTTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGGGCTGCCCATCTCTCTaGCACTCGATGGCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: VEAAIFYSHSANDQGAIRGCPSL*HSMAGG
Trigger: GCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCC...CCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAAGATGGCGGCTTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR GCA 90 bp CTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGTAGAAGCCGCCATCTTCGGCTGCCCATCTCTCTaGCACTCGATGGCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: LVSVLPIESDTGVEAAIFGCPSL*HSMAGG
Trigger: GCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCC...GAAGATGGCGGCTTCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR CCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGACAGTTGGCCAGCTCTaGCTGGTCGACGCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: GLGLELAFIPTARWAERETVGQL*LVDAVP
Trigger: AGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGT...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR TCA 90 bp CGTGTAGGAGCCCTCATCCCTGGCCCGCAAGTTGTAAATGAGCAGCGTGCCATCAGTAGGGGGCAGTCCTaGGATTGTCAGCTCCCCCAG +
Preference number: 2 (lower is better)
Translates to: RVGALIPGPQVVNEQRAISRGQS*DCQLPQ
Trigger: CTGGGGGAGCTGACAATCTCAGGACTGCCCCCTACT...GATGGCACGCTGCTCATTTACAACTTGCGGGCCAGGGATGAGGGCTCCTACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR TCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCCGGGGCAGTGTCGTCTaGGCAGGAGAGCCGCACCAA +
Preference number: 2 (lower is better)
Translates to: QKADTGESRTQETEVAVSRGSVV*AGEPHQ
Trigger: TTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCG...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp CTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGTAGAAGCCGCCATCTTCTCCACCACCCGGGGCTaGTTCTGGTCCAAACGCAGC +
Preference number: 2 (lower is better)
Translates to: LVSVLPIESDTGVEAAIFSTTRG*FWSKRS
Trigger: GCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGA...GAAGATGGCGGCTTCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR CCA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACCCAGGGTCCCTGGGCTaGGCGGTGGGTGCTGGTGAG +
Preference number: 2 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHPGSLG*AVGAGE
Trigger: CTCACCAGCACCCACCGCCCAGCCCAGGGACCCTGG...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR CCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGATCCCTACTGCCAGATaGGCTGAGCGTGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: GLGLELAFIPTARWAEREIPTAR*AEREAG
Trigger: TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGAT...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
3UTR-3UTR GCA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGGGCCTGGCCGGGTGCTaGCACAGCTGTAGGTGCCCG +
Preference number: 2 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVGLAGC*HSCRCP
Trigger: CGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCC...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGCTGGGAGTCGCGGCCTaGCCGGGTGCTGCCACAGCT +
Preference number: 2 (lower is better)
Translates to: MNYFGLGLELAFIPTARWLGVAA*PGAATA
Trigger: AGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAG...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGCCACACACAATAGCCTaGCCGTATCACCCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: GLGLELAFIPTARWAEREPHTIA*PYHPLA
Trigger: TGCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGG...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR TCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTGGCTGGAGAAGCGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRAGWRSA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCGCTTCTCCAGCC...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGCCCGCGTCCTCTGCCTaGAGGGGGTGGATGATCAGG +
Preference number: 2 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQPASSA*RGWMIR
Trigger: CCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGG...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR GCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTTGCCACAGCTGTAGGTaGCCGCGTCCTCTGCCTGCA +
Preference number: 2 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCCHSCR*PRPLPA
Trigger: TGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCA...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCTGCCTGCAGGGGGTaGATGATCAGGGATCCGTCG +
Preference number: 2 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRASACRG*MIRDPS
Trigger: CGACGGATCCCTGATCATCCACCCCCTGCAGGCAGA...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp TTCACACTTTCTCCTGCTACCACACACAATAGCCTGGCCGTATCACCCTCTGGCCTCTCTGCCACTCGATaGCTGGGGGCGGGAAGCCTT +
Preference number: 2 (lower is better)
Translates to: FTLSPATTHNSLAVSPSGLSATR*LGAGSL
Trigger: AAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG...GCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGGTAGCAGGAGAAAGTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR CCA 90 bp GGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAGGATCAAATCACAGTTaGCCAGCTCTGGCTGGTCGA +
Preference number: 2 (lower is better)
Translates to: GLELAFIPTARWAEREAGGSNHS*PALAGR
Trigger: TCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCC...TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR TCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGCCTGCAGGGGGTGGATaGTCAGGGATCCGTCGAACT +
Preference number: 2 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRPAGGG*SGIRRT
Trigger: AGTTCGACGGATCCCTGATCATCCACCCCCTGCAGG...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR GCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGGAGAGCCGCACCAACTaGCCCAGGGCTGCCTGCACC +
Preference number: 2 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWESRTN*PRAACT
Trigger: GGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTC...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR GCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCC +
Preference number: 2 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRGWPSF*QAAWDS
Trigger: GGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCC...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp TATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGTCCGCTGGCCTGGACTaGCATCCACCACCCGGGGCT +
Preference number: 2 (lower is better)
Translates to: YELFWTGAGTSLHPYCQMSAGLD*HPPPGA
Trigger: AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGA...CATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR TCA 90 bp CGTGTAGGAGCCCTCATCCCTGGCCCGCAAGTTGTAAATGAGCAGCGTGCCATCCCATGTCACCCCCTATaGTGCGAAGTTGGATCTTCT +
Preference number: 2 (lower is better)
Translates to: RVGALIPGPQVVNEQRAIPCHPL*CEVGSS
Trigger: AGAAGATCCAACTTCGCATCATAGGGGGTGACATGG...GATGGCACGCTGCTCATTTACAACTTGCGGGCCAGGGATGAGGGCTCCTACACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR TCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGCTCCCCCAGAACTCTaGGCTGGACCCATCGCTGGT +
Preference number: 2 (lower is better)
Translates to: VILATQKADTGESRTQETAPPEL*AGPIAG
Trigger: ACCAGCGATGGGTCCAGCTCAGAGTTCTGGGGGAGC...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR TCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGAGGCTGGAGAAGCGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRGWRSA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCGCTTCTCCAGCC...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp GTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGAGGGATCCGTCGAACTaGAGCCTGTGCCTGTCAGCG +
Preference number: 2 (lower is better)
Translates to: VNSWHSRSWSNTHCHKAGRDPSN*SLCLSA
Trigger: CGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCT...CCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
3UTR-3UTR GCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCGGTGCTGCGGCTGACTaGCTGGCTCCCCTGGTAGGC +
Preference number: 2 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVGAAAD*LAPLVG
Trigger: GCCTACCAGGGGAGCCAGGCAGTCAGCCGCAGCACC...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR GCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACTGCCCCAGGGCTGCCTaGACCAACGAGGGCTCCACA +
Preference number: 2 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNCPRAA*TNEGST
Trigger: TGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCA...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGTCTGCCTGCAGGGGGTaGATGATCAGGGATCCGTCG +
Preference number: 2 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQSACRG*MIRDPS
Trigger: CGACGGATCCCTGATCATCCACCCCCTGCAGGCAGA...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATCCATCTGGGGACTGGTaGACACGGTGGCCATCAGCC +
Preference number: 2 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNPSGDW*TRWPSA
Trigger: GGCTGATGGCCACCGTGTCCACCAGTCCCCAGATGG...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTCCAGGGTCCCTGGGCTaGGCGGTGGGTGCTGGTGAG +
Preference number: 2 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCPGSLG*AVGAGE
Trigger: CTCACCAGCACCCACCGCCCAGCCCAGGGACCCTGG...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGTTGGCCAGCTCTGGCTaGTCGACGCAGTCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: VILATQKADTGESRTQETLASSG*STQSLP
Trigger: TGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAA...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR GCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTGGTCGACGCAGTCCCTaGCAGGGTCCCTGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SFLCPGITFATRQSSERFGRRSP*QGPWAG
Trigger: CCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACC...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp GCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCTCTGCCTGCAGGGGGTaGATGATCAGGGATCCGTCG +
Preference number: 2 (lower is better)
Translates to: AEAGVILIATKLGLQDQISACRG*MIRDPS
Trigger: CGACGGATCCCTGATCATCCACCCCCTGCAGGCAGA...GATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCAACCCGGGGCTGGTTCTaGTCCAAACGCAGCCTGTTT +
Preference number: 2 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSTRGWF*SKRSLF
Trigger: AAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGT...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGGAGCAGCGTGCCATCTaGGGACTGGTGGACACGGTG +
Preference number: 2 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWEQRAI*GLVDTV
Trigger: CACCGTGTCCACCAGTCCCCAGATGGCACGCTGCTC...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR CCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTCCCTGGGCTGGGCGGTaGGTGCTGGTGAGACCACCT +
Preference number: 2 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCPWAGR*VLVRPP
Trigger: AGGTGGTCTCACCAGCACCCACCGCCCAGCCCAGGG...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGTTGGCCAGCTCTGGCTaGTCGACGCAGTCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWLASSG*STQSLP
Trigger: TGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAA...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR CAA 90 bp CTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACAGCCAGATTaGCATGTTGGCCTCAGGAGGGCTTCAAGGTCCAACATCTCGACG +
Preference number: 2 (lower is better)
Translates to: LVSFTQVSDEPSQPD*HVGLRRASRSNIST
Trigger: CGTCGAGATGTTGGACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGTAAAGCTGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCGGTGCCCGCGTCCTCTaGCTGCAGGGGGTGGATGAT +
Preference number: 2 (lower is better)
Translates to: IALLENSSLWLCQRCKHCGARVL*LQGVDD
Trigger: ATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACC...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGAGGGAGCCATCAGGCTaGAGCTGGTGTCTGGGAGAA +
Preference number: 2 (lower is better)
Translates to: VILATQKADTGESRTQETREPSG*SWCLGE
Trigger: TTCTCCCAGACACCAGCTGCAGCCTGATGGCTCCCT...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR GCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTCTGAGATCGCGCCATTaGCCTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLLRSRH*PPAWAT
Trigger: TGTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAG...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACGTCACAGCCAGATTTaGATGTTGGCCTCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSRHSQI*MLASGG
Trigger: CCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACG...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCCGAAGTTGGATCTTCTaGGAGTCGCGGCCTGGCCGG +
Preference number: 2 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVRSWIF*ESRPGR
Trigger: CCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCG...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACTCCACCACCCGGGGCTaGTTCTGGTCCAAACGCAGC +
Preference number: 2 (lower is better)
Translates to: LKTAACGYVRDANTAEGYSTTRG*FWSKRS
Trigger: GCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGA...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCTCTCTGCCACTCGATaGCTGGGGGCGGGAAGCCTT +
Preference number: 2 (lower is better)
Translates to: LKTAACGYVRDANTAEGYLSATR*LGAGSL
Trigger: AAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGGTGCCATCTGGGGACTaGTGGACACGGTGGCCATCA +
Preference number: 2 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWVPSGD*WTRWPS
Trigger: TGATGGCCACCGTGTCCACCAGTCCCCAGATGGCAC...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR CCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCACTCACCCGTGATGTaGTTTGTCCCTTTTCCAGCC +
Preference number: 2 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCHSPVM*FVPFPA
Trigger: GGCTGGAAAAGGGACAAACCACATCACGGGTGAGTG...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp CCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCGGCTGGAGAAGCGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: PFPASVLVIKVTFQSFGPGWRSA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCGCTTCTCCAGCC...GGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp CCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCCCAGGAGACGGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: PFPASVLVIKVTFQSFGPPGDGG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCCGTCTCCTGG...GGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATCGTTCCTGGACCACCTaGTGTTCACACTTTCTCCTG +
Preference number: 2 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNRSWTT*CSHFLL
Trigger: CAGGAGAAAGTGTGAACATCAGGTGGTCCAGGAACG...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR TCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTAGCTTTAAAACACATTaGTGGGCTGGGCACAGTGGC +
Preference number: 2 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPSFKTH*WAGHSG
Trigger: GCCACTGTGCCCAGCCCATCAATGTGTTTTAAAGCT...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
3UTR-3UTR GCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGTGGAGTAATACTCATTaGCACAAAGCTGGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRWSNTH*HKAGPA
Trigger: TGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
3UTR-3UTR GCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACAGCCAGATTTaGATGTTGGCCTCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNRHSQI*MLASGG
Trigger: CCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACG...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCGTCATCCGGATCCGCTaGCCTGGACTGGCATCCACC +
Preference number: 2 (lower is better)
Translates to: KVERDLEAHRIHASSFSIVIRIR*PGLAST
Trigger: GGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGAC...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGTCATTGCCACAAAGCTaGGCCTGCAGGATCAAATCA +
Preference number: 2 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRSLPQS*ACRIKS
Trigger: TGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGA...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCCCTATGAACTATTTTaGACTGGGGCTGGAACTAGC +
Preference number: 2 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCPYELF*TGAGTS
Trigger: GCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGCACTCACCCGTGATGTaGTTTGTCCCTTTTCCAGCC +
Preference number: 2 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVHSPVM*FVPFPA
Trigger: GGCTGGAAAAGGGACAAACCACATCACGGGTGAGTG...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATAGACGGAGGTTGCAGTaGGCTGAGATCGCGCCATTG +
Preference number: 2 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHRRRLQ*AEIAPL
Trigger: CAATGGCGCGATCTCAGCTCACTGCAACCTCCGTCT...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGAGAGACTAGAGCAATaGACCATCGCTGATTTTAGC +
Preference number: 2 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRERLEQ*TIADFS
Trigger: GCTAAAATCAGCGATGGTTCATTGCTCTAGTCTCTC...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTATGCTGTTAACCCTCTaGACCAGATTTAGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: QMNRHSQICMLASGGLQGMLLTL*TRFRAD
Trigger: GTCAGCTCTAAATCTGGTGCAGAGGGTTAACAGCAT...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGATGCTGTTAACCCTCTaGACCAGATTTAGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRMLLTL*TRFRAD
Trigger: GTCAGCTCTAAATCTGGTGCAGAGGGTTAACAGCAT...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCCGTCACAGCCAGATTTaGATGTTGGCCTCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVRHSQI*MLASGG
Trigger: CCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACG...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCGACTGGTGGACACGGTaGCCATCAGCCTGCACAGGT +
Preference number: 2 (lower is better)
Translates to: KVERDLEAHRIHASSFSIDWWTR*PSACTG
Trigger: ACCTGTGCAGGCTGATGGCCACCGTGTCCACCAGTC...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTGGAAACGTGAACAGCTaGCACAGCAGAAGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: SLILAQNTSLIQQDLACPGNVNS*HSRSWS
Trigger: ACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCC...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
3UTR-3UTR CCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACCCTATGAACTATTTTaGACTGGGGCTGGAACTAGC +
Preference number: 2 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSPYELF*TGAGTS
Trigger: GCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGAGAGAAGCTGGTAACTaGCTGCCGTTGAGGCTAAAC +
Preference number: 2 (lower is better)
Translates to: VILATQKADTGESRTQETREAGN*LPLRLN
Trigger: GTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCT...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGAGAGAAGCTGGTAACTaGCTGCCGTTGAGGCTAAAC +
Preference number: 2 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVREAGN*LPLRLN
Trigger: GTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCT...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTTTCTCCCTAGCCCTATaGACTATTTTGGACTGGGGC +
Preference number: 2 (lower is better)
Translates to: SLILAQNTSLIQQDLACPFSLAL*TILDWG
Trigger: GCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAA...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCCGCTGGTCTCGGTCCTaGCCATTGAAAGCGACACAG +
Preference number: 2 (lower is better)
Translates to: KVERDLEAHRIHASSFSIRWSRS*PLKATQ
Trigger: CTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCG...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGTCATTGCCACAAAGCTaGGCCTGCAGGATCAAATCA +
Preference number: 2 (lower is better)
Translates to: VILATQKADTGESRTQETSLPQS*ACRIKS
Trigger: TGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGA...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGTGGCACAGCAGAAGCTaGAGTAATACTCATTGCCAC +
Preference number: 2 (lower is better)
Translates to: VILATQKADTGESRTQETWHSRS*SNTHCH
Trigger: GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCA...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
3UTR-3UTR TCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCCATGTCACCCCCTATaGTGCGAAGTTGGATCTTCT +
Preference number: 2 (lower is better)
Translates to: LKTAACGYVRDANTAEGYPCHPL*CEVGSS
Trigger: AGAAGATCCAACTTCGCATCATAGGGGGTGACATGG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR TCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCAGCTACTCAGAAGGCTaGCACAGGAGAATCAAGAAC +
Preference number: 2 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPSYSEG*HRRIKN
Trigger: GTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCT...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACAGCTTTAAAACACATTaGTGGGCTGGGCACAGTGGC +
Preference number: 2 (lower is better)
Translates to: LKTAACGYVRDANTAEGYSFKTH*WAGHSG
Trigger: GCCACTGTGCCCAGCCCATCAATGTGTTTTAAAGCT...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCAGCTTTAAAACACATTaGTGGGCTGGGCACAGTGGC +
Preference number: 2 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVSFKTH*WAGHSG
Trigger: GCCACTGTGCCCAGCCCATCAATGTGTTTTAAAGCT...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGTGGAGTAATACTCATTaGCACAAAGCTGGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWWSNTH*HKAGPA
Trigger: TGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR GCA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTGATAACAGTGCTAACTaGAGCTGTTTCATCCCAAAT +
Preference number: 2 (lower is better)
Translates to: QMNRHSQICMLASGGLQGDNSAN*SCFIPN
Trigger: ATTTGGGATGAAACAGCTGCAGTTAGCACTGTTATC...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp CATCTATTCCATTTTGCCAACAAGGGTTATGCTGTTAACCCTCTGCACCAGATTCCACACACAATAGCCTaGCCGTATCACCCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: HLFHFANKGYAVNPLHQIPHTIA*PYHPLA
Trigger: TGCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGG...AATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGAATAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTAGGCTAAACACTGGGTaGGTTTTTGAAAGAGCTAAT +
Preference number: 2 (lower is better)
Translates to: QMNRHSQICMLASGGLQGRLNTG*VFERAN
Trigger: ATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCT...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGAGAAAACAGCAGCCTGTaGTTATGTCAGAGATGCAAA +
Preference number: 2 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRENSSL*LCQRCK
Trigger: TTTGCATCTCTGACATAACCACAGGCTGCTGTTTTC...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATGCCAGATTTGCATGTTaGCCTCAGGAGGGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHARFAC*PQEGFK
Trigger: CTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGC...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR CAA 90 bp TATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTaGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCC +
Preference number: 2 (lower is better)
Translates to: YHSPVMWFVPFPASV*VIKVTFQSFGPCNA
Trigger: GGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCAGCTACTCAGAAGGCTaGCACAGGAGAATCAAGAAC +
Preference number: 2 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVSYSEG*HRRIKN
Trigger: GTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCT...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCGAGAGACTAGAGCAATaGACCATCGCTGATTTTAGC +
Preference number: 2 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPERLEQ*TIADFS
Trigger: GCTAAAATCAGCGATGGTTCATTGCTCTAGTCTCTC...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCATGAGTAGAGAAGACTaGGAAGTATCACTCACCCGT +
Preference number: 2 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPMSRED*EVSLTR
Trigger: ACGGGTGAGTGATACTTCTCAGTCTTCTCTACTCAT...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCTGGCACAGCAGAAGCTaGAGTAATACTCATTGCCAC +
Preference number: 2 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVWHSRS*SNTHCH
Trigger: GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCA...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
3UTR-3UTR CCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAAAACAGCAGCCTGTaGTTATGTCAGAGATGCAAA +
Preference number: 2 (lower is better)
Translates to: VILATQKADTGESRTQETENSSL*LCQRCK
Trigger: TTTGCATCTCTGACATAACCACAGGCTGCTGTTTTC...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTGCCAGATTTGCATGTTaGCCTCAGGAGGGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCARFAC*PQEGFK
Trigger: CTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGC...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTCCCAAATCCCTATTTaGGGTCTTAACATCTATTCC +
Preference number: 2 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVSQIPI*GLNIYS
Trigger: GGAATAGATGTTAAGACCTCAAATAGGGATTTGGGA...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTTACACAGGTGTCAGATaGACCGTCACAGCCAGATTT +
Preference number: 2 (lower is better)
Translates to: PFPIAILILLMLFLMTDSYTGVR*TVTARF
Trigger: AAATCTGGCTGTGACGGTTCATCTGACACCTGTGTA...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTAGAAGTCCTGAGAGATaGAGAATGTTGTCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLRSPER*RMLSSN
Trigger: GTTGGAAGACAACATTCTTCATCTCTCAGGACTTCT...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTCCACAAAGCTGGGCCTaGAGGATCAAATCACAGTTG +
Preference number: 2 (lower is better)
Translates to: SFLCPGITFATRQSSERFPQSWA*RIKSQL
Trigger: CAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGG...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAACCCTATGAACTATTTTaGACTGGGGCTGGAACTAGC +
Preference number: 2 (lower is better)
Translates to: LFLKTAACGYVRDANTAEPYELF*TGAGTS
Trigger: GCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp CATCTATTCCATTTTGCCAACAAGGGTTATGCTGTTAACCCTCTGCACCAGATTAGAGAAGCTGGTAACTaGCTGCCGTTGAGGCTAAAC +
Preference number: 2 (lower is better)
Translates to: HLFHFANKGYAVNPLHQIREAGN*LPLRLN
Trigger: GTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCT...AATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGAATAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGAGATGCAAACACTGCTaGAGGCTACAGAGAGAAGCT +
Preference number: 2 (lower is better)
Translates to: FPIAILILLMLFLMTDSLRCKHC*RLQREA
Trigger: AGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCT...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGTACACAGGTGTCAGATaGACCGTCACAGCCAGATTT +
Preference number: 2 (lower is better)
Translates to: FPIAILILLMLFLMTDSLYTGVR*TVTARF
Trigger: AAATCTGGCTGTGACGGTTCATCTGACACCTGTGTA...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCAAAACCAGCCATAAGTaGACATGGATGCTCTTCAAT +
Preference number: 2 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPKTSHK*TWMLFN
Trigger: ATTGAAGAGCATCCATGTTCACTTATGGCTGGTTTT...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCAGGCTAAACACTGGGTaGGTTTTTGAAAGAGCTAAT +
Preference number: 2 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPRLNTG*VFERAN
Trigger: ATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCT...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTAGGCTAAACACTGGGTaGGTTTTTGAAAGAGCTAAT +
Preference number: 2 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLRLNTG*VFERAN
Trigger: ATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCT...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCAGGCTAAACACTGGGTaGGTTTTTGAAAGAGCTAAT +
Preference number: 2 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVRLNTG*VFERAN
Trigger: ATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCT...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCGCTGTTTTTAATGACTaGCAGTCTGATTTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVAVFND*QSDLSL
Trigger: CAAAGACAAATCAGACTGTCAGTCATTAAAAACAGC...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACAAGAAGTCCTGAGAGATaGAGAATGTTGTCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTRSPER*RMLSSN
Trigger: GTTGGAAGACAACATTCTTCATCTCTCAGGACTTCT...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCAAGTGGAAAGGGACTTaGAAGCTCATAGAATCCATG +
Preference number: 2 (lower is better)
Translates to: KVERDLEAHRIHASSFSIKWKGT*KLIESM
Trigger: CATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTT...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR CAA 90 bp CAGCAGGACTTGGCATGCCCTTTAGAAAACAAACAGGTGTTAACTTaGAAATCATTACACATCTCCCTGCCCAGCTTTAAATTAAGTGGA +
Preference number: 2 (lower is better)
Translates to: QQDLACPLENKQVLT*KSLHISLPSFKLSG
Trigger: TCCACTTAATTTAAAGCTGGGCAGGGAGATGTGTAATGATTTCAAAGTTAACACCTGTTTGTTTTCTAAAGGGCATGCCAAGTCCTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR CAA 90 bp CCATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTaGGCATGCCCTTTAGAAAACAAACAGGTGTTAACTTTGAAATCA +
Preference number: 2 (lower is better)
Translates to: PSLILAQNTSLIQQD*ACPLENKQVLTLKS
Trigger: TGATTTCAAAGTTAACACCTGTTTGTTTTCTAAAGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCTCCCAAATCCCTATTTaGGGTCTTAACATCTATTCC +
Preference number: 2 (lower is better)
Translates to: KVERDLEAHRIHASSFSISQIPI*GLNIYS
Trigger: GGAATAGATGTTAAGACCTCAAATAGGGATTTGGGA...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR TCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGCTGTTTTTAATGACTaGCAGTCTGATTTGTCTTTG +
Preference number: 2 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCAVFND*QSDLSL
Trigger: CAAAGACAAATCAGACTGTCAGTCATTAAAAACAGC...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTGATAACAGTGCTAACTaGAGCTGTTTCATCCCAAAT +
Preference number: 2 (lower is better)
Translates to: SFLCPGITFATRQSSERFDNSAN*SCFIPN
Trigger: ATTTGGGATGAAACAGCTGCAGTTAGCACTGTTATC...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR GCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTGATAACAGTGCTAACTaGAGCTGTTTCATCCCAAAT +
Preference number: 2 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCDNSAN*SCFIPN
Trigger: ATTTGGGATGAAACAGCTGCAGTTAGCACTGTTATC...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR CCA 72 bp GGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTaGGCGGTGGGTGCTGGTGAGACCACCTTCACCTCG +
Preference number: 3 (lower is better)
Translates to: GWSTQSLPGSLG*AVGAGETTFTS
Trigger: CGAGGTGAAGGTGGTCTCACCAGCACCCACCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR TCA 72 bp CTGCCAGGCAGCCTGGGATTCCGGGGCAGTGTCGTCTaGGCAGGAGAGCCGCACCAACTGCCCCAGGGCTGC +
Preference number: 3 (lower is better)
Translates to: LPGSLGFRGSVV*AGEPHQLPQGC
Trigger: GCAGCCCTGGGGCAGTTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR CCA 72 bp GGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTaGCCTGGACTGGCATCCACCACCCGGGGCTGGTTC +
Preference number: 3 (lower is better)
Translates to: GKPSARQVIRIR*PGLASTTRGWF
Trigger: GAACCAGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR GCA 72 bp GTTGGATCTTCTGGGAGTCGCGGCCTGGCCGGGTGCTaGCACAGCTGTAGGTGCCCGCGTCCTCTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: VGSSGSRGLAGC*HSCRCPRPLPA
Trigger: TGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAGAAGATCCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR CCA 72 bp CGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACTaGCATCCACCACCCGGGGCTGGTTCTGGTCCAAAC +
Preference number: 3 (lower is better)
Translates to: RHGRSSGSAGLD*HPPPGAGSGPN
Trigger: GTTTGGACCAGAACCAGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR GCA 72 bp GAAGTTGGATCTTCTGGGAGTCGCGGCCTGGCCGGGTaGTGCCACAGCTGTAGGTGCCCGCGTCCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: EVGSSGSRGLAG*CHSCRCPRPLP
Trigger: AGGCAGAGGACGCGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR CCA 72 bp AGAGACAGGCTGCCCATCTCTCTGCCACTCGATGGCTaGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCG +
Preference number: 3 (lower is better)
Translates to: RDRLPISLPLDG*GREAFGTAGHP
Trigger: CGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCCTGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR CCA 72 bp GCCTGCAGGATCAAATCACAGTTGGCCAGCTCTGGCTaGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: ACRIKSQLASSG*STQSLPGSLGW
Trigger: CCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR TCA 72 bp TGTAGGTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATaGTCAGGGATCCGTCGAACTGCAGCCTGTGCCTGT +
Preference number: 3 (lower is better)
Translates to: CRCPRPLPAGGG*SGIRRTAACAC
Trigger: ACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACCTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR CCA 72 bp GCCATGTCACCCCCTATGATGCGAAGTTGGATCTTCTaGGAGTCGCGGCCTGGCCGGGTGCTGCCACAGCTG +
Preference number: 3 (lower is better)
Translates to: AMSPPMMRSWIF*ESRPGRVLPQL
Trigger: CAGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCGCATCATAGGGGGTGACATGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR CCA 72 bp ATCCGCTGGCCTGGACTGGCATCCACCACCCGGGGCTaGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: IRWPGLASTTRG*FWSKRSLFAGC
Trigger: ACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR CCA 72 bp GAGGAGATGGGCTGGCCATCTTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCGTCTGAGCAGGAGAGC +
Preference number: 3 (lower is better)
Translates to: EEMGWPSFCQAA*DSGAVSSEQES
Trigger: GCTCTCCTGCTCAGACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR GCA 72 bp CCATCTGGGGACTGGTGGACACGGTGGCCATCAGCCTaGACAGGTAGCCCGTTCCTGGACCACCTGATGTTC +
Preference number: 3 (lower is better)
Translates to: PSGDWWTRWPSA*TGSPFLDHLMF
Trigger: GAACATCAGGTGGTCCAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCGTGTCCACCAGTCCCCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR GCA 72 bp CTGTGCCTGTCAGAGGAGATGGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCCGGGGCAGTGTCGTCT +
Preference number: 3 (lower is better)
Translates to: LCLSEEMGWPSF*QAAWDSGAVSS
Trigger: AGACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR CCA 72 bp CCTGGCCCGCAAGTTGTAAATGAGCAGCGTGCCATCTaGGGACTGGTGGACACGGTGGCCATCAGCCTGCAC +
Preference number: 3 (lower is better)
Translates to: PGPQVVNEQRAI*GLVDTVAISLH
Trigger: GTGCAGGCTGATGGCCACCGTGTCCACCAGTCCCCAGATGGCACGCTGCTCATTTACAACTTGCGGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR CCA 72 bp TCGAACTGCAGCCTGTGCCTGTCAGAGGAGATGGGCTaGCCATCTTTCTGCCAGGCAGCCTGGGATTCCGGG +
Preference number: 3 (lower is better)
Translates to: SNCSLCLSEEMG*PSFCQAAWDSG
Trigger: CCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGCACAGGCTGCAGTTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557061.5
3UTR CCA 72 bp GTCAGCTCCCCCAGAACTCTGAGCTGGACCCATCGCTaGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTG +
Preference number: 3 (lower is better)
Translates to: VSSPRTLSWTHR*SRSCPLKATQV
Trigger: CACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCTCAGAGTTCTGGGGGAGCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR CCA 72 bp TGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTaGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAG +
Preference number: 3 (lower is better)
Translates to: CHKAGPAGSNHS*PALAGRRSPCQ
Trigger: CTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR TCA 72 bp TGTAGGAGCCCTCATCCCTGGCCCGCAAGTTGTAAATaGGCAGCGTGCCATCTGGGGACTGGTGGACACGGT +
Preference number: 3 (lower is better)
Translates to: CRSPHPWPASCK*AACHLGTGGHG
Trigger: ACCGTGTCCACCAGTCCCCAGATGGCACGCTGCTCATTTACAACTTGCGGGCCAGGGATGAGGGCTCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR CCA 72 bp CTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATaGGCTGAGCGTGAGGCTGGAAACGTGAACAGCTGG +
Preference number: 3 (lower is better)
Translates to: LGLELAFIPTAR*AEREAGNVNSW
Trigger: CCAGCTGTTCACGTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
3UTR-3UTR CAA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACCCCAGCAGCCCCCGCTaGGCCAAAGTCCTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHPSSPR*AKVLSW
Trigger: CCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCTGGG...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CAA 90 bp CCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTCCCAGCAGCCCCCGCTaGGCCAAAGTCCTGAGCTGG +
Preference number: 3 (lower is better)
Translates to: PSPMNYFGLGLELAFIPTPSSPR*AKVLSW
Trigger: CCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCTGGG...AGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CAA 90 bp GTAGAAGCCGCCATCTTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGCCAAACGCAGCCTGTTaGCAGGCTGTGGGTGTGAAG +
Preference number: 3 (lower is better)
Translates to: VEAAIFYSHSANDQGAIRPNAAC*QAVGVK
Trigger: CTTCACACCCACAGCCTGCAAACAGGCTGCGTTTGG...CCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAAGATGGCGGCTTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR CAA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATGCTGAGATCGCGCCATaGCCCTCCAGCCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNAEIAP*PSSLGN
Trigger: GTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAGC...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR CCA 72 bp AGTCCTGAGATTGTCAGCTCCCCCAGAACTCTGAGCTaGACCCATCGCTGGTCTCGGTCCTGCCCATTGAAA +
Preference number: 3 (lower is better)
Translates to: SPEIVSSPRTLS*THRWSRSCPLK
Trigger: TTTCAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCTCAGAGTTCTGGGGGAGCTGACAATCTCAGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
3UTR-3UTR CAA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGCCAAACGCAGCCTGTTaGCAGGCTGTGGGTGTGAAG +
Preference number: 3 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQPNAAC*QAVGVK
Trigger: CTTCACACCCACAGCCTGCAAACAGGCTGCGTTTGG...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR CCA 72 bp AGATGGGCTGAGCGTGAGGCTGGAAACGTGAACAGCTaGCACAGCAGAAGCTGGAGTAATACTCATTGCCAC +
Preference number: 3 (lower is better)
Translates to: RWAEREAGNVNS*HSRSWSNTHCH
Trigger: GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCACGCTCAGCCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
3UTR-3UTR CAA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGCCCTATGATGCGAAGTaGGATCTTCTGGGAGTCGCG +
Preference number: 3 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQPYDAK*DLLGVA
Trigger: CGCGACTCCCAGAAGATCCAACTTCGCATCATAGGG...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CAA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGAGGATCAAATCACAGTaGGCCAGCTCTGGCTGGTCG +
Preference number: 3 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQRIKSQ*ASSGWS
Trigger: CGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCT...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CAA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGGCCAAGATCGCACCATaGTACTCCAGCCTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVAKIAP*YSSLGK
Trigger: CTTGCCCAGGCTGGAGTACAATGGTGCGATCTTGGC...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGCCGTCACAGCCAGATTaGCATGTTGGCCTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: VILATQKADTGESRTQETPSQPD*HVGLRR
Trigger: CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGG...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR TCA 72 bp AGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTaGAGGCTACAGAGAGAAGCTGGTAACTGGCTGCCG +
Preference number: 3 (lower is better)
Translates to: SSLWLCQRCKHC*RLQREAGNWLP
Trigger: CGGCAGCCAGTTACCAGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR TCA 72 bp ACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATaGACCGTCACAGCCAGATTTGCATGTTGGCCTCAG +
Preference number: 3 (lower is better)
Translates to: TEQAGQLYTGVR*TVTARFACWPQ
Trigger: CTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGAGGATCAAATCACAGTaGGCCAGCTCTGGCTGGTCG +
Preference number: 3 (lower is better)
Translates to: VILATQKADTGESRTQETRIKSQ*ASSGWS
Trigger: CGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCT...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CAA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCGCCAAGATCGCACCATaGTACTCCAGCCTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVAKIAP*YSSLGK
Trigger: CTTGCCCAGGCTGGAGTACAATGGTGCGATCTTGGC...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTCTGATACAGCAGGACTaGGCATGCCCTTTAGAAAAC +
Preference number: 3 (lower is better)
Translates to: QMNRHSQICMLASGGLQGLIQQD*ACPLEN
Trigger: GTTTTCTAAAGGGCATGCCAAGTCCTGCTGTATCAG...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTCCCTGTTACTGCATaGCCCACAACCCTTCCCCAT +
Preference number: 3 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVFPVTA*PTTLPH
Trigger: ATGGGGAAGGGTTGTGGGCAATGCAGTAACAGGGAA...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR GCA 72 bp TTACACAGGTGTCAGATGAACCGTCACAGCCAGATTTaGATGTTGGCCTCAGGAGGGCTTCAAGGTCCAACA +
Preference number: 3 (lower is better)
Translates to: LHRCQMNRHSQI*MLASGGLQGPT
Trigger: TGTTGGACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATCCGTCACAGCCAGATTaGCATGTTGGCCTCAGGAGG +
Preference number: 3 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHPSQPD*HVGLRR
Trigger: CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGG...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATGAGAGGGGCTCCTCATaGTCACTGTACAGAGCAGGC +
Preference number: 3 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHERGSS*SLYRAG
Trigger: GCCTGCTCTGTACAGTGACAATGAGGAGCCCCTCTC...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR TCA 72 bp GTGATAGGCATCTGTAATCCTAGCTACTCAGAAGGCTaGCACAGGAGAATCAAGAACCCAGGAGACGGAGGT +
Preference number: 3 (lower is better)
Translates to: VIGICNPSYSEG*HRRIKNPGDGG
Trigger: ACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTACAGATGCCTATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR GCA 72 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTaGCACAAAGCTGGGCCTGCAGGATCAAATCACAGT +
Preference number: 3 (lower is better)
Translates to: NSWHSRSWSNTH*HKAGPAGSNHS
Trigger: ACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
3UTR-3UTR CAA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACAGCCAAGATCGCACCATaGTACTCCAGCCTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTAKIAP*YSSLGK
Trigger: CTTGCCCAGGCTGGAGTACAATGGTGCGATCTTGGC...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGAACAGATTGCTCTTCTaGAAAACAGCAGCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVNRLLF*KTAACG
Trigger: ACCACAGGCTGCTGTTTTCAAGAAGAGCAATCTGTT...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCAAACATCTATTCCATTTaGCCAACAAGGGTTATGCTG +
Preference number: 3 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSNIYSI*PTRVML
Trigger: CAGCATAACCCTTGTTGGCAAAATGGAATAGATGTT...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTACACTGGGTGGGTTTTaGAAAGAGCTAATGTATTCC +
Preference number: 3 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLTLGGF*KELMYS
Trigger: GGAATACATTAGCTCTTTCAAAAACCCACCCAGTGT...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR GCA 72 bp TTCCCTGTTACTGCATTGCCCACAACCCTTCCCCATTaGTATCCTCATCCTGCTAATGCTGTTTTTAATGAC +
Preference number: 3 (lower is better)
Translates to: FPVTALPTTLPH*YPHPANAVFND
Trigger: GTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGGTTGTGGGCAATGCAGTAACAGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR CCA 72 bp GTAGAGAAGACTGAGAAGTATCACTCACCCGTGATGTaGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATA +
Preference number: 3 (lower is better)
Translates to: VEKTEKYHSPVM*FVPFPASVLVI
Trigger: TATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGTCTTCTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCCTGATACAGCAGGACTaGGCATGCCCTTTAGAAAAC +
Preference number: 3 (lower is better)
Translates to: KVERDLEAHRIHASSFSILIQQD*ACPLEN
Trigger: GTTTTCTAAAGGGCATGCCAAGTCCTGCTGTATCAG...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTTGGCAGCAAACATTTaGCTTCACAGATTCCTACTT +
Preference number: 3 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPLAANI*LHRFLL
Trigger: AAGTAGGAATCTGTGAAGCAAAATGTTTGCTGCCAA...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp CCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCAAAGTGGAAAGGGACTaGGAAGCTCATAGAATCCAT +
Preference number: 3 (lower is better)
Translates to: PFPASVLVIKVTFQSFGPKVERD*EAHRIH
Trigger: ATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT...GGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTAACAGATTGCTCTTCTaGAAAACAGCAGCCTGTGGT +
Preference number: 3 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCNRLLF*KTAACG
Trigger: ACCACAGGCTGCTGTTTTCAAGAAGAGCAATCTGTT...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTAAAGTGGAAAGGGACTaGGAAGCTCATAGAATCCAT +
Preference number: 3 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCKVERD*EAHRIH
Trigger: ATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCTGATACAGCAGGACTaGGCATGCCCTTTAGAAAAC +
Preference number: 3 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCLIQQD*ACPLEN
Trigger: GTTTTCTAAAGGGCATGCCAAGTCCTGCTGTATCAG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTAACATCTATTCCATTTaGCCAACAAGGGTTATGCTG +
Preference number: 3 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCNIYSI*PTRVML
Trigger: CAGCATAACCCTTGTTGGCAAAATGGAATAGATGTT...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR GCA 72 bp TTTCCAGTTCTTTCATGCTCAGATAACAGTGCTAACTaGAGCTGTTTCATCCCAAATCCCTATTTGAGGTCT +
Preference number: 3 (lower is better)
Translates to: FPVLSCSDNSAN*SCFIPNPYLRS
Trigger: AGACCTCAAATAGGGATTTGGGATGAAACAGCTGCAGTTAGCACTGTTATCTGAGCATGAAAGAACTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTTTGGCAGCAAACATTTaGCTTCACAGATTCCTACTT +
Preference number: 3 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCLAANI*LHRFLL
Trigger: AAGTAGGAATCTGTGAAGCAAAATGTTTGCTGCCAA...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR-3UTR CAA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGTTTCCAGCCAGTGTGTaGGTAATAAAAGTCACCTTT +
Preference number: 3 (lower is better)
Translates to: FPIAILILLMLFLMTDSLFPASV*VIKVTF
Trigger: AAAGGTGACTTTTATTACCAACACACTGGCTGGAAA...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR TCA 72 bp TGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTaGCAGTCTGATTTGTCTTTGGCAGCAAACATTTTG +
Preference number: 3 (lower is better)
Translates to: CYPHPANAVFND*QSDLSLAANIL
Trigger: CAAAATGTTTGCTGCCAAAGACAAATCAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGCCAGAAGCCCCAGGCTaGGGACGACGGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRPEAPG*GRRGPW
Trigger: CCATGGGCCCCGTCGTCCCCAGCCTGGGGCTTCTGG...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGGTGGTCACCCCTGGCTaGGGGGTGTTCCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRVVTPG*GVFLGC
Trigger: GCAGCCCAGGAACACCCCTCAGCCAGGGGTGACCAC...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGCCCGACCGCAGGGGTTaGTGGTATGGGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRPDRRG*WYGGCC
Trigger: GCAGCAGCCCCCATACCAGCAACCCCTGCGGTCGGG...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCGCGGCCTGGCCGGGTaGTGCCACAGCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWRGLAG*CHSCRC
Trigger: GCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCG...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCAGGGTCCCTGGGCTaGGCGGTGGGTGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWPGSLG*AVGAGE
Trigger: CTCACCAGCACCCACCGCCCAGCCCAGGGACCCTGG...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGGCCCCTGTCCTGTGCTaGCTGGGTTCCTGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRAPVLC*LGSCSP
Trigger: AGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGC...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGGGGCAGCCTTGCCACTaGGGCCCGAGAGATGCCGTG +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWGQPCH*GPRDAV
Trigger: CACGGCATCTCTCGGGCCTCAGTGGCAAGGCTGCCC...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp CTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACAGAAGCCACTGCCCTTaGCCTGGGCATGCCCCCGGT +
Preference number: 4 (lower is better)
Translates to: LGAGSLRHGRSSGSAGLDRSHCP*PGHAPG
Trigger: ACCGGGGGCATGCCCAGGTCAAGGGCAGTGGCTTCT...GTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCGGGGCTTCGAACTCCGCGCACTaGTCGGCCCGGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: HGRSSGSAGLDWHPPPGASNSAH*SARKSR
Trigger: CCGGGACTTCCGGGCCGAGCAGTGCGCGGAGTTCGA...AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACCCTGTCGCCTCCGAGTaGCCGAGCTGCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LGAGSLRHGRSSGSAGLDPVASE*PSCSSW
Trigger: CCAAGAGCTGCAGCTCGGGCACTCGGAGGCGACAGG...GTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGTGGTATGGGGGCTGCTaGAGAGAGGGAGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWWYGGC*REGAGP
Trigger: GGGCCCCGCTCCCTCTCTGCAGCAGCCCCCATACCA...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCGGCCTGGCCGGGTGCTaGCACAGCTGTAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: CHSMAGGGKPSARQVIRIGLAGC*HSCRCP
Trigger: CGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCC...GATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGCCCACCACTGGCCTCTaGAGTCTGAGGCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRPTTGL*SLRQGT
Trigger: AGTCCCCTGCCTCAGACTCCAGAGGCCAGTGGTGGG...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCGGGGCTCCCAGGGCTGACAGGTaGGTGCCTTGGTCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HGRSSGSAGLDWHPPPGAPRADR*VPWSPL
Trigger: CAGGGGCGACCAAGGCACCCACCTGTCAGCCCTGGG...AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCCTGGGAGTCGCGGCCTaGCCGGGTGCTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: PSLCHSMAGGGKPSARQVLGVAA*PGAATA
Trigger: AGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAG...GACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGCTGTCCTGTGCTGGCTaGGTTCCTGCTCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRLSCAG*VPARLQ
Trigger: CTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAG...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp CTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACGACGAGTCCAGCTCGTaGTCACAGCCGACAACCCGG +
Preference number: 4 (lower is better)
Translates to: LGAGSLRHGRSSGSAGLDDESSS*SQPTTR
Trigger: CCGGGTTGTCGGCTGTGATCACGAGCTGGACTCGTC...GTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGCGCCAACGCCACAACTaGCAGAACACTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRRQRHN*QNTLPR
Trigger: CCTGGGGAGAGTGTTCTGTCAGTTGTGGCGTTGGCG...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCCGGGGCAGCTCTCCGTaGGACAAGAGCGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSATRWLGAGSLRHGRSSRGSSP*DKSGGS
Trigger: GGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCG...GGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACCGCCACACTCCGCGCTaGAGTCACTCCATGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LGAGSLRHGRSSGSAGLDRHTPR*SHSMSR
Trigger: ACGGCTCATGGAGTGACTGCAGCGCGGAGTGTGGCG...GTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCTGGTATGGGGGCTGCTaGAGAGAGGGAGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LSATRWLGAGSLRHGRSSWYGGC*REGAGP
Trigger: GGGCCCCGCTCCCTCTCTGCAGCAGCCCCCATACCA...GGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCCTTGACCTGGGCATaGCCCCGGTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWPLTWA*PRCCHH
Trigger: GTGGTGACAGCACCGGGGGCATGCCCAGGTCAAGGG...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCGGGGCTTGCCCCAGGGCTGCCTaGACCAACGAGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: HGRSSGSAGLDWHPPPGACPRAA*TNEGST
Trigger: TGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCA...AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRGWPSF*QAAWDS
Trigger: GGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCC...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGAGGCCTCATGGTCGATaGTGCAGAACACCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRRPHGR*CRTPGG
Trigger: CCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCT...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGTCAGCTGGCCGTGGCTaGCGCTGGCACATGTGGTCG +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWSAGRG*RWHMWS
Trigger: CGACCACATGTGCCAGCGCCAGCCACGGCCAGCTGA...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGCTCCCGCAGTGGCTaGGCGGCCCAATGGCACAGA +
Preference number: 4 (lower is better)
Translates to: LSATRWLGAGSLRHGRSSGSRSG*AAQWHR
Trigger: TCTGTGCCATTGGGCCGCCCAGCCACTGCGGGAGCC...GGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCCTGTGGTCACCCCTaGCTGAGGGGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWPCGHP*LRGVPG
Trigger: CCCAGGAACACCCCTCAGCCAGGGGTGACCACAGGG...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp CACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGGTGCCGTACCTGCTCTGCTaGCAGGGGGCCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HHPGLVLVQTQPVCRLWVPYLLC*QGAPGQ
Trigger: CTGCCCTGGGGCCCCCTGTCAGCAGAGCAGGTACGG...CACCCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp CACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCGGGGCTGCTCCCCCAGAACTCTaGGCTGGACCCATCGCTGGT +
Preference number: 4 (lower is better)
Translates to: HGRSSGSAGLDWHPPPGAAPPEL*AGPIAG
Trigger: ACCAGCGATGGGTCCAGCTCAGAGTTCTGGGGGAGC...AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR TCA 90 bp CTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACAGTAGGGGGCAGTCCTaGGATTGTCAGCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGAGSLRHGRSSGSAGLDSRGQS*DCQLPQ
Trigger: CTGGGGGAGCTGACAATCTCAGGACTGCCCCCTACT...GTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR GCA 90 bp CCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCCCCCAGGTGTCACTCTaGCGCCTCACCTTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSLCHSMAGGGKPSARQVPQVSL*RLTLGA
Trigger: GGCTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGG...GACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCACGGGGTAGCAGGTCGTaGCGTCACCCCCACACCGCA +
Preference number: 4 (lower is better)
Translates to: HLSATRWLGAGSLRHGRSRGSRS*RHPHTA
Trigger: TGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCG...TGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGACAGGCTTGGAGTGCTaGAGGCTCCCGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWTGLEC*RLPQWL
Trigger: CAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGT...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCGGGGTGTTCCTGGGCTaGCCACCACTGGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LRHGRSSGSAGLDWHPPPGVFLG*PPLASG
Trigger: TCCAGAGGCCAGTGGTGGGCAGCCCAGGAACACCCC...GGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACCTGAGATCGCGCCATTaGCCTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LGAGSLRHGRSSGSAGLDLRSRH*PPAWAT
Trigger: TGTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAG...GTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGGTGCGACAAGAGCGGTaGCTCCGGGCGGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWVRQER*LRAGPT
Trigger: CGTGGGCCCCGCCCGGAGCCACCGCTCTTGTCGCAC...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACGCATCCAGGGGTTGCTaGCAGGGGTGTGCACATCCT +
Preference number: 4 (lower is better)
Translates to: LGAGSLRHGRSSGSAGLDASRGC*QGCAHP
Trigger: AGGATGTGCACACCCCTGCCAGCAACCCCTGGATGC...GTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCTGCCTTGGTCGCCCCTaGGGTCACCTCGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: CHSMAGGGKPSARQVIRICLGRP*GHLVLP
Trigger: GGGGAGAACGAGGTGACCCCAGGGGCGACCAAGGCA...GATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCCGGGGTAGGCATGGCTaGGCTGGCCCACACAGCCTT +
Preference number: 4 (lower is better)
Translates to: LRHGRSSGSAGLDWHPPPRGRHG*AGPHSL
Trigger: AAGGCTGTGTGGGCCAGCCCAGCCATGCCTACCCCG...GGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGGTGCCAGAAGCCCCAGGCTaGGGACGACGGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: HHPGLVLVQTQPVCRLWVPEAPG*GRRGPW
Trigger: CCATGGGCCCCGTCGTCCCCAGCCTGGGGCTTCTGG...CACCCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp AGGCTGCCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGTCTCCGGGCAAGGGTaGAGATTGCAGGAACGCCGG +
Preference number: 4 (lower is better)
Translates to: RLPISLPLDGWGREAFGTVSGQG*RLQERR
Trigger: CCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGAC...CGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp CCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCGCCCAATGGCACAGATaGCCTGTCGCCTCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: PSLCHSMAGGGKPSARQVAQWHR*PVASEC
Trigger: GCACTCGGAGGCGACAGGTCATCTGTGCCATTGGGC...GACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp TGGTGGACACGGTGGCCATCAGCCTGCACAGGTAGCCCGTTCCTGGACCACCTGGGGCAGCCTTGCCACTaGGGCCCGAGAGATGCCGTG +
Preference number: 4 (lower is better)
Translates to: WWTRWPSACTGSPFLDHLGQPCH*GPRDAV
Trigger: CACGGCATCTCTCGGGCCTCAGTGGCAAGGCTGCCC...CAGGTGGTCCAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCGTGTCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR TCA 90 bp TGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCTTTGTGCAGCCAGCGTaGTGGGGCCCCTCAGCGACA +
Preference number: 4 (lower is better)
Translates to: CHSMAGGGKPSARQVIRIFVQPA*WGPSAT
Trigger: TGTCGCTGAGGGGCCCCATCACGCTGGCTGCACAAA...GATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp CCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCTTTGTGCAGCCAGCGTaGTGGGGCCCCTCAGCGACA +
Preference number: 4 (lower is better)
Translates to: PSLCHSMAGGGKPSARQVFVQPA*WGPSAT
Trigger: TGTCGCTGAGGGGCCCCATCACGCTGGCTGCACAAA...GACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp TGGTGGACACGGTGGCCATCAGCCTGCACAGGTAGCCCGTTCCTGGACCACCTGGCTGGGTCCCTGGGCTaGGGGAAGCGGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: WWTRWPSACTGSPFLDHLAGSLG*GKRLSS
Trigger: TGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGC...CAGGTGGTCCAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCGTGTCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR GCA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCGCCACACTCCGCGCTaGAGTCACTCCATGAGCCGT +
Preference number: 4 (lower is better)
Translates to: PISLPLDGWGREAFGTAGRHTPR*SHSMSR
Trigger: ACGGCTCATGGAGTGACTGCAGCGCGGAGTGTGGCG...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCTCCACAGGCTTGGAGTaGTGCAGGCTCCCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LRHGRSSGSAGLDWHPPPSTGLE*CRLPQW
Trigger: CCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGA...GGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGTGTGCACATCCTGCATaGTGGGGACCTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWCAHPA*WGPPGG
Trigger: TCCCCCAGGAGGTCCCCAGCATGCAGGATGTGCACA...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp GGTGCTGCCACAGCTGTAGGTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATGATCTGAGGCCCGAGAGATaGCGTGTGGCCATCGGGGCA +
Preference number: 4 (lower is better)
Translates to: GAATAVGARVLCLQGVDDLRPER*RVAIGA
Trigger: TGCCCCGATGGCCACACGGCATCTCTCGGGCCTCAG...ATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCAGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGTGGGCATGCCCCCGGTaGTGTCACCACCATACGACT +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWWACPR*CHHHTT
Trigger: AGTCGTATGGTGGTGACAGCACCGGGGGCATGCCCA...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTTCACTGGGCTCATTCTaGTGGGCCTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PISLPLDGWGREAFGTAGSLGSF*WAWGWW
Trigger: CCACCAGCCCCAGGCCCAGCAGAATGAGCCCAGTGA...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp TGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCCGCGGCCTGGCCGGGTaGTGCCACAGCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: CLQGVDDQGSVELQPVPVRGLAG*CHSCRC
Trigger: GCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCG...GACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp CTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTCGCGGCCTGGCCGGGTaGTGCCACAGCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LCLQGVDDQGSVELQPVPRGLAG*CHSCRC
Trigger: GCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCG...AGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCGGTGGCCATCAGCCTaGACAGGTAGCCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PISLPLDGWGREAFGTAGRWPSA*TGSPFL
Trigger: CAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCG...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp TGGTGGACACGGTGGCCATCAGCCTGCACAGGTAGCCCGTTCCTGGACCACCTGCCGGTCAGCTGGCCGTaGCTGGCGCTGGCACATGTG +
Preference number: 4 (lower is better)
Translates to: WWTRWPSACTGSPFLDHLPVSWP*LALAHV
Trigger: CACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGG...CAGGTGGTCCAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCGTGTCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp TGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCTACACGGAGCGGGACTaGGAGCCTCCTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: CHSMAGGGKPSARQVIRIYTERD*EPPPQE
Trigger: CTCCTGTGGAGGAGGCTCCCAGTCCCGCTCCGTGTA...GATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp GTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCCCCTGTGGTCACCCCTaGCTGAGGGGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VPASSACRGWMIRDPSNCPCGHP*LRGVPG
Trigger: CCCAGGAACACCCCTCAGCCAGGGGTGACCACAGGG...GCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp AGGCTGCCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGAGCAGCGTGCCATCTaGGGACTGGTGGACACGGTG +
Preference number: 4 (lower is better)
Translates to: RLPISLPLDGWGREAFGTEQRAI*GLVDTV
Trigger: CACCGTGTCCACCAGTCCCCAGATGGCACGCTGCTC...CGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCTGTCCTGTGCTGGCTaGGTTCCTGCTCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PISLPLDGWGREAFGTAGLSCAG*VPARLQ
Trigger: CTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAG...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCCTGGCCCAGGCTGTTaGTCTTGCCGCCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: PISLPLDGWGREAFGTAGPGPGC*SCRQRP
Trigger: TGGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGG...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp GTCCCTGGGCTGAGGGAAGCGGCTCAGCTCAGCCTCAGACAGCACGGCCATGTCGACGAGTCCAGCTCGTaGTCACAGCCGACAACCCGG +
Preference number: 4 (lower is better)
Translates to: VPGLREAAQLSLRQHGHVDESSS*SQPTTR
Trigger: CCGGGTTGTCGGCTGTGATCACGAGCTGGACTCGTC...GACATGGCCGTGCTGTCTGAGGCTGAGCTGAGCCGCTTCCCTCAGCCCAGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp TGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCGCTGCAGTCACTCCATaGGCCGTGGCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: CHSMAGGGKPSARQVIRIAAVTP*AVAPAE
Trigger: TTCAGCTGGAGCCACGGCTCATGGAGTGACTGCAGC...GATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp AGGCTGCCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGTGCAGGTTACAGGCCTaGATGGCAGGGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: RLPISLPLDGWGREAFGTCRLQA*MAGGFP
Trigger: TGGGAAGCCCCCTGCCATTCAGGCCTGTAACCTGCA...CGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp GGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGACCGTACCTGCTCTGCTaGCAGGGGGCCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLELAFIPTARWAEREAGPYLLC*QGAPGQ
Trigger: CTGCCCTGGGGCCCCCTGTCAGCAGAGCAGGTACGG...TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCAGCGTCAAAGGTGCCTaGGACGGGGTAGCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: PSLCHSMAGGGKPSARQVSVKGA*DGVAGR
Trigger: ACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCT...GACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCACCCCAGGTGCCAACATaGCAGGCCTGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: HLSATRWLGAGSLRHGRSPQVPT*QAWSLR
Trigger: CCTCAGTGACCAGGCCTGGCATGTTGGCACCTGGGG...TGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTTTGCTGGCAGGGGTGTaGACATCCTGCATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PISLPLDGWGREAFGTAGLLAGV*TSCMLG
Trigger: CCCCAGCATGCAGGATGTGCACACCCCTGCCAGCAA...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TGGTGGACACGGTGGCCATCAGCCTGCACAGGTAGCCCGTTCCTGGACCACCTGTGCTGGTATGGGGGCTaGTGCAGAGAGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: WWTRWPSACTGSPFLDHLCWYGG*CREGAG
Trigger: CCCCGCTCCCTCTCTGCAGCAGCCCCCATACCAGCA...CAGGTGGTCCAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCGTGTCCACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR GCA 90 bp GTCCCTGGGCTGAGGGAAGCGGCTCAGCTCAGCCTCAGACAGCACGGCCATGTCCGTGAGGACTGTGTCTaGAGTCGTGGGGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VPGLREAAQLSLRQHGHVREDCV*SRGALS
Trigger: GCTCAGGGCCCCACGACTGCAGACACAGTCCTCACG...GACATGGCCGTGCTGTCTGAGGCTGAGCTGAGCCGCTTCCCTCAGCCCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TGGTGGACACGGTGGCCATCAGCCTGCACAGGTAGCCCGTTCCTGGACCACCTGCCCTTGACCTGGGCATaGCCCCGGTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: WWTRWPSACTGSPFLDHLPLTWA*PRCCHH
Trigger: GTGGTGACAGCACCGGGGGCATGCCCAGGTCAAGGG...CAGGTGGTCCAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCGTGTCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR GCA 90 bp CTGCCTGGCTCCCCTGGTAGGCACTGCACGTGTAGGAGCCCTCATCCCTGGCCCCTGGACCCAAGCTCCTaGCCCCATGGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LPGSPGRHCTCRSPHPWPLDPSS*PHGHSP
Trigger: TGGAGAATGGCCATGGGGGCAGGAGCTTGGGTCCAG...GGGCCAGGGATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGAGCCAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR GCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGTCGAACTGCAGCCTGTaGCTGTCAGAGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWSNCSL*LSEEMG
Trigger: GCCCATCTCCTCTGACAGGCACAGGCTGCAGTTCGA...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR CCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGTCTGCCGCCTCACCTTaGGAGCCGAGGACCCGGGCG +
Preference number: 4 (lower is better)
Translates to: GLGLELAFIPTARWAERESAASP*EPRTRA
Trigger: CGCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGA...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp AGGCTGCCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCTCGTAATGCAGGATaGTGCTGGCTGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RLPISLPLDGWGREAFGTARNAG*CWLLAG
Trigger: CCCTGCCAGCAGCCAGCACCATCCTGCATTACGAGC...CGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCCTGCCTTCCAGCGCTTaGTCTCCGGGCAAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PSLCHSMAGGGKPSARQVLPSSA*SPGKGE
Trigger: TTCACCCTTGCCCGGAGACCAAGCGCTGGAAGGCAG...GACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp AGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCAGCGGAGTCCTCCACGGCCTCCTaGATGCCGGCCCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: RGWMIRDPSNCSLCLSAESSTAS*MPAPSD
Trigger: GTCTGACGGGGCCGGCATCCAGGAGGCCGTGGAGGA...CTCCGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTGGTTACAGGCCTGAATaGCAGGGGGCTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PISLPLDGWGREAFGTAGGYRPE*QGASQA
Trigger: TGCCTGGGAAGCCCCCTGCCATTCAGGCCTGTAACC...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCCCGAGCTGCAGCTCTTaGAGCATAGACCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LRHGRSSGSAGLDWHPPPPSCSS*SIDPRC
Trigger: GCACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGG...GGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCAGCGGATGCAGGCTCCCGCAGTaGCTGGGCGGCCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: QGVDDQGSVELQPVPVSGCRLPQ*LGGPMA
Trigger: TGCCATTGGGCCGCCCAGCCACTGCGGGAGCCTGCA...TCCGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGCACATCCTGCATGCTaGGGACCTCCTGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: LSATRWLGAGSLRHGRSSAHPAC*GPPGGD
Trigger: ATCTCCCCCAGGAGGTCCCCAGCATGCAGGATGTGC...GGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTCTGTGTCTGCAGTCGTaGGGCCCTGAGCCCGACCGC +
Preference number: 4 (lower is better)
Translates to: LCLQGVDDQGSVELQPVPLCLQS*GPEPDR
Trigger: GCGGTCGGGCTCAGGGCCCCACGACTGCAGACACAG...AGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGCCTATGATGCGAAGTTaGATCTTCTGGGAGTCGCGG +
Preference number: 4 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRPMMRS*IFWESR
Trigger: CCGCGACTCCCAGAAGATCCAACTTCGCATCATAGG...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCAGCGGATCCGCTGGCCTGGACTaGCATCCACCACCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: QGVDDQGSVELQPVPVSGSAGLD*HPPPGA
Trigger: AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGA...TCCGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGTCCGCTGGCCTGGACTaGCATCCACCACCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWSAGLD*HPPPGA
Trigger: AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGA...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGCCGGATCCGCTGGCCTaGACTGGCATCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWPDPLA*TGIHHP
Trigger: CGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGG...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp GTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCCTCTCTGCCACTCGATaGCTGGGGGCGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: VPASSACRGWMIRDPSNCLSATR*LGAGSL
Trigger: AAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG...GCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp TGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCCCAGAACTCTGAGCTaGACCCATCGCTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: CHSMAGGGKPSARQVIRIPRTLS*THRWSR
Trigger: CCGAGACCAGCGATGGGTCCAGCTCAGAGTTCTGGG...GATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp CCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCGGCCGTATCACCCTCTaGCACTGTCACAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: PSLCHSMAGGGKPSARQVGRITL*HCHSRG
Trigger: CCCCCTACTGTGACAGTGCCAGAGGGTGATACGGCC...GACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp CTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCGACTGGTGGACACGGTaGCCATCAGCCTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: LRHGRSSGSAGLDWHPPPDWWTR*PSACTG
Trigger: ACCTGTGCAGGCTGATGGCCACCGTGTCCACCAGTC...GGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp GGTGCTGCCACAGCTGTAGGTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATGATCCATCTGGGGACTGGTaGACACGGTGGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: GAATAVGARVLCLQGVDDPSGDW*TRWPSA
Trigger: GGCTGATGGCCACCGTGTCCACCAGTCCCCAGATGG...ATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCAGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTACAGTTGGCCAGCTCTaGCTGGTCGACGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PISLPLDGWGREAFGTAGTVGQL*LVDAVP
Trigger: AGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGT...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp CTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCAGACGGAGGTTGCAGTaGGCTGAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: LSATRWLGAGSLRHGRSSRRRLQ*AEIAPL
Trigger: CAATGGCGCGATCTCAGCTCACTGCAACCTCCGTCT...GGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp GCCTGCAGGATCAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCGGGGCAGCTCTCCGTaGGACAAGAGCGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ACRIKSQLASSGWSTQSLRGSSP*DKSGGS
Trigger: GGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCG...CAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCAGCGGAGGGTGCCCATGGCCCTaGCTTCCAGCGCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: QGVDDQGSVELQPVPVSGGCPWP*LPALGL
Trigger: GAGACCAAGCGCTGGAAGGCAGGGCCATGGGCACCC...TCCGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGTGCCCATGGCCCTaGCTTCCAGCGCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: QITVGQLWLVDAVPARVPGCPWP*LPALGL
Trigger: GAGACCAAGCGCTGGAAGGCAGGGCCATGGGCACCC...AGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCTCCGAGTGCCCGAGCTaGAGCTCTTGGAGCATAGAC +
Preference number: 4 (lower is better)
Translates to: PSLCHSMAGGGKPSARQVSECPS*SSWSID
Trigger: GTCTATGCTCCAAGAGCTGCAGCTCGGGCACTCGGA...GACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp GGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAGGGCTGACAGGTGGGTaGCTTGGTCGCCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLELAFIPTARWAEREAGGLTGG*LGRPWG
Trigger: ACCCCAGGGGCGACCAAGGCACCCACCTGTCAGCCC...TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGCTGAGGCCCGAGAGATaGCGTGTGGCCATCGGGGCA +
Preference number: 4 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWLRPER*RVAIGA
Trigger: TGCCCCGATGGCCACACGGCATCTCTCGGGCCTCAG...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATGGGCATGCCCCCGGTaGTGTCACCACCATACGACT +
Preference number: 4 (lower is better)
Translates to: HLSATRWLGAGSLRHGRSWACPR*CHHHTT
Trigger: AGTCGTATGGTGGTGACAGCACCGGGGGCATGCCCA...TGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp GTAGAAGCCGCCATCTTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGGTGCGACAAGAGCGGTaGCTCCGGGCGGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: VEAAIFYSHSANDQGAIRVRQER*LRAGPT
Trigger: CGTGGGCCCCGCCCGGAGCCACCGCTCTTGTCGCAC...CCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAAGATGGCGGCTTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp GTAGAAGCCGCCATCTTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGCCAGGGGCTCCGAGGTaGGGCCCCGGGCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: VEAAIFYSHSANDQGAIRPGAPR*GPGHGV
Trigger: GACTCCATGCCCGGGGCCCCACCTCGGAGCCCCTGG...CCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAAGATGGCGGCTTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp GTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCGCACATCCTGCATGCTaGGGACCTCCTGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: VPASSACRGWMIRDPSNCAHPAC*GPPGGD
Trigger: ATCTCCCCCAGGAGGTCCCCAGCATGCAGGATGTGC...GCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCGCTGAGGGGTGTTCCTaGGCTGCCCACCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: CLQGVDDQGSVELQPVPVAEGCS*AAHHWP
Trigger: AGGCCAGTGGTGGGCAGCCCAGGAACACCCCTCAGC...GACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCAGCGGAGACAGGTGGGTGCCTTaGTCGCCCCTGGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: QGVDDQGSVELQPVPVSGDRWVP*SPLGSP
Trigger: AGGTGACCCCAGGGGCGACCAAGGCACCCACCTGTC...TCCGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGTCAGAGGAGATGGGCTaGCCATCTTTCTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWSEEMG*PSFCQA
Trigger: TGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGA...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp GTCCCTGGGCTGAGGGAAGCGGCTCAGCTCAGCCTCAGACAGCACGGCCATGTCGTGCCATCTGGGGACTaGTGGACACGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: VPGLREAAQLSLRQHGHVVPSGD*WTRWPS
Trigger: TGATGGCCACCGTGTCCACCAGTCCCCAGATGGCAC...GACATGGCCGTGCTGTCTGAGGCTGAGCTGAGCCGCTTCCCTCAGCCCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp GGCTCCCCTGGTAGGCACTGCACGTGTAGGAGCCCTCATCCCTGGCCCGCAAGTGTGCCATCTGGGGACTaGTGGACACGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: GSPGRHCTCRSPHPWPASVPSGD*WTRWPS
Trigger: TGATGGCCACCGTGTCCACCAGTCCCCAGATGGCAC...ACTTGCGGGCCAGGGATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR TCA 90 bp GCTCAGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGTGGTCACCCCTGGCTaGGGGGTGTTCCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: AQLSLRQHGHVTPYDAKLVVTPG*GVFLGC
Trigger: GCAGCCCAGGAACACCCCTCAGCCAGGGGTGACCAC...CAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCGCAGTCGTGGGGCCCTaGGCCCGACCGCAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSAVVGP*ARPQGL
Trigger: CAACCCCTGCGGTCGGGCTCAGGGCCCCACGACTGC...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CTGAGCTGGACCCATCGCTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGCGGGGCAGTGTCGTCTaGGCAGGAGAGCCGCACCAA +
Preference number: 4 (lower is better)
Translates to: LSWTHRWSRSCPLKATQVRGSVV*AGEPHQ
Trigger: TTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCG...CACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR GCA 90 bp TGGTGGACACGGTGGCCATCAGCCTGCACAGGTAGCCCGTTCCTGGACCACCTGTTGCTGGCAGGGGTGTaGACATCCTGCATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: WWTRWPSACTGSPFLDHLLLAGV*TSCMLG
Trigger: CCCCAGCATGCAGGATGTGCACACCCCTGCCAGCAA...CAGGTGGTCCAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCGTGTCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR GCA 90 bp GCCTGCAGGATCAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCAACTGCCCCAGGGCTaGCTGCACCAACGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: ACRIKSQLASSGWSTQSLQLPQG*LHQRGL
Trigger: GAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTG...CAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGCCCGCGTCCTCTGCCTaGAGGGGGTGGATGATCAGG +
Preference number: 4 (lower is better)
Translates to: GLGLELAFIPTARWAEREPASSA*RGWMIR
Trigger: CCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGG...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp GGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAGGTGCCCGCGTCCTCTaGCTGCAGGGGGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: GLELAFIPTARWAEREAGGARVL*LQGVDD
Trigger: ATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACC...TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp GGTGCTGCCACAGCTGTAGGTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATGATAGGGAGCCATCAGGCTaGAGCTGGTGTCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GAATAVGARVLCLQGVDDREPSG*SWCLGE
Trigger: TTCTCCCAGACACCAGCTGCAGCCTGATGGCTCCCT...ATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp AGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCGGAACGCCGGTCAGCTaGCCGTGGCTGGCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSASDSTAMSPPMMRSWIGTPVS*PWLALA
Trigger: TGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCC...GATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CTGAGCTGGACCCATCGCTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGGCTGAGGGGTGTTCCTaGGCTGCCCACCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: LSWTHRWSRSCPLKATQVAEGCS*AAHHWP
Trigger: AGGCCAGTGGTGGGCAGCCCAGGAACACCCCTCAGC...CACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp AGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCAGCGGAGGTCATCCGGATCCGCTaGCCTGGACTGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: RGWMIRDPSNCSLCLSAEVIRIR*PGLAST
Trigger: GGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGAC...CTCCGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGGTCATCCGGATCCGCTaGCCTGGACTGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWVIRIR*PGLAST
Trigger: GGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGAC...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp GTCCCTGGGCTGAGGGAAGCGGCTCAGCTCAGCCTCAGACAGCACGGCCATGTCATCCCTACTGCCAGATaGGCTGAGCGTGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VPGLREAAQLSLRQHGHVIPTAR*AEREAG
Trigger: TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGAT...GACATGGCCGTGCTGTCTGAGGCTGAGCTGAGCCGCTTCCCTCAGCCCAGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CTGCCTGGCTCCCCTGGTAGGCACTGCACGTGTAGGAGCCCTCATCCCTGGCCCCCGAGGCAAAGTTATTaGCATTGCCATGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LPGSPGRHCTCRSPHPWPPRQSY*HCHGSR
Trigger: GCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGG...GGGCCAGGGATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGAGCCAGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR CCA 90 bp CTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTCCTGGCCCAGGCTGTTaGTCTTGCCGCCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: LCLQGVDDQGSVELQPVPPGPGC*SCRQRP
Trigger: TGGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGG...AGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp CTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCTGGTCCAGTGCCCATTaGGGTAGTATTCCCCACGAA +
Preference number: 4 (lower is better)
Translates to: LSATRWLGAGSLRHGRSSWSSAH*GSIPHE
Trigger: TTCGTGGGGAATACTACCTCAATGGGCACTGGACCA...GGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTGCAGTCGTGGGGCCCTaGGCCCGACCGCAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVAVVGP*ARPQGL
Trigger: CAACCCCTGCGGTCGGGCTCAGGGCCCCACGACTGC...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCGTGAGGCTGGAAACGTaGACAGCTGGCACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VPASSACRGWMIRDPSNCVRLET*TAGTAE
Trigger: TTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCAC...GCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp GTCCCTGGGCTGAGGGAAGCGGCTCAGCTCAGCCTCAGACAGCACGGCCATGTCGTGAGGCTGGAAACGTaGACAGCTGGCACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VPGLREAAQLSLRQHGHVVRLET*TAGTAE
Trigger: TTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCAC...GACATGGCCGTGCTGTCTGAGGCTGAGCTGAGCCGCTTCCCTCAGCCCAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp TGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCCAGCCAGGAAGTTCCTaGTGGCAGCAGCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: CLQGVDDQGSVELQPVPVQPGSS*WQQPRR
Trigger: TCGACGAGGCTGCTGCCAGCAGGAACTTCCTGGCTG...GACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR GCA 90 bp CTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTACGGCATCCAGGGGTTaGTGGCAGGGGTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: LCLQGVDDQGSVELQPVPTASRG*WQGCAH
Trigger: ATGTGCACACCCCTGCCAGCAACCCCTGGATGCCGT...AGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACGAGAGCCGCACCAACTaGCCCAGGGCTGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNESRTN*PRAACT
Trigger: GGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTC...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp GGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGATGCCACAGCTGTAGGTaGCCGCGTCCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GLELAFIPTARWAEREAGCHSCR*PRPLPA
Trigger: TGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCA...TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp CACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGGTGTCCCCTGGTAGGCACTaGACGTGTAGGAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: HHPGLVLVQTQPVCRLWVSPGRH*TCRSPH
Trigger: ATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGA...CACCCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR GCA 90 bp CAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTCCAGGAGACGGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: QITVGQLWLVDAVPARVPPGDGG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCCGTCTCCTGG...AGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACCGCCTGCAGGACTGCTaGCGCCACCATCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNRLQDC*RHHPCG
Trigger: CCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCG...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp TGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCACTTGTCCTCCTGCTTaGACGAGTCCAGCTCGTGAT +
Preference number: 4 (lower is better)
Translates to: CHSMAGGGKPSARQVIRITCPPA*TSPARD
Trigger: ATCACGAGCTGGACTCGTCCAAGCAGGAGGACAAGT...GATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCCAGGGGCTCCGAGGTaGGGCCCCGGGCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCPGAPR*GPGHGV
Trigger: GACTCCATGCCCGGGGCCCCACCTCGGAGCCCCTGG...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCTTCGGAACGCCGGTCAGCTaGCCGTGGCTGGCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SASDSTAMSPPMMRSWIFGTPVS*PWLALA
Trigger: TGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCC...GAAGATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTGAGCACGCTGCGGTATaGAGCAAAGAACCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: PISLPLDGWGREAFGTAGEHAAV*SKEPLS
Trigger: TGAAAGGGGTTCTTTGCTCCATACCGCAGCGTGCTC...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp GCTCAGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGACAGGTGGGTGCCTTaGTCGCCCCTGGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: AQLSLRQHGHVTPYDAKLDRWVP*SPLGSP
Trigger: AGGTGACCCCAGGGGCGACCAAGGCACCCACCTGTC...CAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACCTGTGTCTGCAGTCGTaGGGCCCTGAGCCCGACCGC +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNLCLQS*GPEPDR
Trigger: GCGGTCGGGCTCAGGGCCCCACGACTGCAGACACAG...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp GCCTGCAGGATCAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGAGCCCCGGCACTCACTaGGCTCATTCTGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: ACRIKSQLASSGWSTQSLSPGTH*AHSAGP
Trigger: AGGCCCAGCAGAATGAGCCCAGTGAGTGCCGGGGCT...CAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGGTGGAGGACCGGCTGCAGTaGCCACGTTGTCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: HHPGLVLVQTQPVCRLWVEDRLQ*PRCHSN
Trigger: GTTGCTATGACAACGTGGCCACTGCAGCCGGTCCTC...CACCCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGCCTGTCAGCGGAGGTaGAGGGAGCTGTCACGTGAA +
Preference number: 4 (lower is better)
Translates to: LCLQGVDDQGSVELQPVPACQRR*RELSRE
Trigger: TTCACGTGACAGCTCCCTCCACCTCCGCTGACAGGC...AGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTCTGGGAGTCGCGGCCTaGCCGGGTGCTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRALGVAA*PGAATA
Trigger: AGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAG...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCCTATGATGCGAAGTTaGATCTTCTGGGAGTCGCGG +
Preference number: 4 (lower is better)
Translates to: PISLPLDGWGREAFGTAGPMMRS*IFWESR
Trigger: CCGCGACTCCCAGAAGATCCAACTTCGCATCATAGG...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CTGAGCTGGACCCATCGCTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGTCCACCACCCGGGGCTaGTTCTGGTCCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: LSWTHRWSRSCPLKATQVSTTRG*FWSKRS
Trigger: GCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGA...CACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp AGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCTCCGCTGGCCTGGACTaGCATCCACCACCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SSASDSTAMSPPMMRSWISAGLD*HPPPGA
Trigger: AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGA...GATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp GCCTGCAGGATCAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCTCTCTGCCACTCGATaGCTGGGGGCGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ACRIKSQLASSGWSTQSLLSATR*LGAGSL
Trigger: AAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG...CAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGAGCTGGACCCATCGCTaGTCTCGGTCCTGCCCATTG +
Preference number: 4 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWSWTHR*SRSCPL
Trigger: CAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCT...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGAGCAGCGTGCCATCTaGGGACTGGTGGACACGGTG +
Preference number: 4 (lower is better)
Translates to: GLGLELAFIPTARWAEREEQRAI*GLVDTV
Trigger: CACCGTGTCCACCAGTCCCCAGATGGCACGCTGCTC...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp CTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGTAGAAGCCGCCATCTTCCCCTGGGCTGGGCGGTaGGTGCTGGTGAGACCACCT +
Preference number: 4 (lower is better)
Translates to: LVSVLPIESDTGVEAAIFPWAGR*VLVRPP
Trigger: AGGTGGTCTCACCAGCACCCACCGCCCAGCCCAGGG...GAAGATGGCGGCTTCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp TCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCTTCCCAGGGTCCCTGGGCTaGGCGGTGGGTGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SASDSTAMSPPMMRSWIFPGSLG*AVGAGE
Trigger: CTCACCAGCACCCACCGCCCAGCCCAGGGACCCTGG...GAAGATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp TGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCACAGTTGGCCAGCTCTaGCTGGTCGACGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: CLQGVDDQGSVELQPVPVTVGQL*LVDAVP
Trigger: AGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGT...GACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACTCATTGCCACAAAGCTaGGCCTGCAGGATCAAATCA +
Preference number: 4 (lower is better)
Translates to: LGAGSLRHGRSSGSAGLDSLPQS*ACRIKS
Trigger: TGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGA...GTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCCCAGAAGCCCCAGGCTaGGGACGACGGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSPEAPG*GRRGPW
Trigger: CCATGGGCCCCGTCGTCCCCAGCCTGGGGCTTCTGG...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGCCGCCACCATCCGTGTaGGTGCTCCTTCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GLGLELAFIPTARWAEREPPPSV*VLLPEA
Trigger: GGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGG...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp TCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCTTCCCAGTCCAGGGGCCCTaGACCCAAGCTCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SASDSTAMSPPMMRSWIFPVQGP*TQAPAP
Trigger: GGGGGCAGGAGCTTGGGTCCAGGGCCCCTGGACTGG...GAAGATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCCCAGTCCAGGGGCCCTaGACCCAAGCTCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSPVQGP*TQAPAP
Trigger: GGGGGCAGGAGCTTGGGTCCAGGGCCCCTGGACTGG...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCCACTCACCCGTGATGTaGTTTGTCCCTTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LSATRWLGAGSLRHGRSSHSPVM*FVPFPA
Trigger: GGCTGGAAAAGGGACAAACCACATCACGGGTGAGTG...GGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR TCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTGGCGCTCCCGGAAGCTaGCACCCCCTCCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVGAPGS*HPLHRS
Trigger: GGACCTGTGGAGGGGGTGTCAGCTTCCGGGAGCGCC...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCTCCTCCACAGGAGGCTaGGCAGGGTGCCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSSSTGG*AGCPWP
Trigger: GGGCCATGGGCACCCTGCTCAGCCTCCTGTGGAGGA...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000644200.2
CDS-3UTR TCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCCGTACCTGCTCTGCTaGCAGGGGGCCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCPYLLC*QGAPGQ
Trigger: CTGCCCTGGGGCCCCCTGTCAGCAGAGCAGGTACGG...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACCGGGGCAGTGTCGTCTaGGCAGGAGAGCCGCACCAA +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNRGSVV*AGEPHQ
Trigger: TTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCG...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR TCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCGCTGGGTCCCTGGGCTaGGGGAAGCGGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSAGSLG*GKRLSS
Trigger: TGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGC...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCGGGGCTAGTATCACTCACCCGTaGTGTGGTTTGTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: HGRSSGSAGLDWHPPPGASITHP*CGLSLF
Trigger: GAAAAGGGACAAACCACATCACGGGTGAGTGATACT...AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR GCA 90 bp AGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCCCCCAGGTGTCACTCTaGCGCCTCACCTTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SSASDSTAMSPPMMRSWIPQVSL*RLTLGA
Trigger: GGCTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGG...GATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTAGCATAGACCCCAGGTaGCAACATGCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LCLQGVDDQGSVELQPVPSIDPR*QHARPG
Trigger: ACCAGGCCTGGCATGTTGGCACCTGGGGTCTATGCT...AGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp AGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCCCTGTCGCCTCCGAGTaGCCGAGCTGCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSASDSTAMSPPMMRSWIPVASE*PSCSSW
Trigger: CCAAGAGCTGCAGCTCGGGCACTCGGAGGCGACAGG...GATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACTGCTGGTATGGGGGCTaGTGCAGAGAGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNCWYGG*CREGAG
Trigger: CCCCGCTCCCTCTCTGCAGCAGCCCCCATACCAGCA...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp GGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: GLELAFIPTARWAEREAGGWPSF*QAAWDS
Trigger: GGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCC...TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp TTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGCTGCAGCTGGTGTCTCCCGCGTCCTCTGCCTaGAGGGGGTGGATGATCAGG +
Preference number: 4 (lower is better)
Translates to: FYSHSANDQGAIRLQLVSPASSA*RGWMIR
Trigger: CCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGG...AGACACCAGCTGCAGCCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR GCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCGCGGCCTGGCCGGGTaGTGCCACAGCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCRGLAG*CHSCRC
Trigger: GCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCG...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCGGAGAAGAGACAGGCTaGCCATCTCTCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: CLQGVDDQGSVELQPVPVGEETG*PSLCHS
Trigger: CGAGTGGCAGAGAGATGGGCAGCCTGTCTCTTCTCC...GACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp TTCACACTTTCTCCTGCTACCACACACAATAGCCTGGCCGTATCACCCTCTGGCGGTCGACGCAGTCCCTaGCAGGGTCCCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FTLSPATTHNSLAVSPSGGRRSP*QGPWAG
Trigger: CCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACC...GCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGGTAGCAGGAGAAAGTGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR GCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGCTGAGATCGCGCCATTaGCCTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: GLGLELAFIPTARWAERELRSRH*PPAWAT
Trigger: TGTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAG...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACGCTCGCCTGCAGGACTaGTGCCGCCACCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNARLQD*CRHHPC
Trigger: ACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGC...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCAGTGCGACAAGAGCGGTaGCTCCGGGCGGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSVRQER*LRAGPT
Trigger: CGTGGGCCCCGCCCGGAGCCACCGCTCTTGTCGCAC...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGAGAAGTTCTCCCCCTTaGGAATGCAGTTCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWRSSPP*ECSSVH
Trigger: GTGAACTGAACTGCATTCCCAAGGGGGAGAACTTCT...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp GCTCAGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGTCACTCCATGAGCCGTaGCTCCAGCTGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: AQLSLRQHGHVTPYDAKLSLHEP*LQLKPG
Trigger: CCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTGA...CAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGCTGCAGCTGGTGTCTTCAGCTGGCCGTGGCTaGCGCTGGCACATGTGGTCG +
Preference number: 4 (lower is better)
Translates to: FYSHSANDQGAIRLQLVSSAGRG*RWHMWS
Trigger: CGACCACATGTGCCAGCGCCAGCCACGGCCAGCTGA...AGACACCAGCTGCAGCCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCCTGTGTCTGCAGTCGTaGGGCCCTGAGCCCGACCGC +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSLCLQS*GPEPDR
Trigger: GCGGTCGGGCTCAGGGCCCCACGACTGCAGACACAG...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGCTGCAGCTGGTGTCTCCACTGCCCTTGACCTaGGCATGCCCCCGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: FYSHSANDQGAIRLQLVSPLPLT*ACPRCC
Trigger: ACAGCACCGGGGGCATGCCCAGGTCAAGGGCAGTGG...AGACACCAGCTGCAGCCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp GCTCAGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCG +
Preference number: 4 (lower is better)
Translates to: AQLSLRQHGHVTPYDAKLFCQAA*DSGAVS
Trigger: CGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAA...CAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp GCTCAGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGTCATCCGGATCCGCTaGCCTGGACTGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: AQLSLRQHGHVTPYDAKLVIRIR*PGLAST
Trigger: GGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGAC...CAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTCTGCCACTCGATGGCTaGGGGCGGGAAGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRALPLDG*GREAFG
Trigger: GCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAG...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCGGGGCTCCCTATGAACTATTTTaGACTGGGGCTGGAACTAGC +
Preference number: 4 (lower is better)
Translates to: HGRSSGSAGLDWHPPPGAPYELF*TGAGTS
Trigger: GCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG...AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp TGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCAGAGAAGCTGGTAACTaGCTGCCGTTGAGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: CHSMAGGGKPSARQVIRIREAGN*LPLRLN
Trigger: GTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCT...GATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGCCTGTCAGAGGAGATaGGCTGGCCATCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LCLQGVDDQGSVELQPVPACQRR*AGHLSA
Trigger: GGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGC...AGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR TCA 90 bp GCCTGCAGGATCAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGACCTCCTGGGGGAGATaGCAGGGCTGCGTGTTACAA +
Preference number: 4 (lower is better)
Translates to: ACRIKSQLASSGWSTQSLTSWGR*QGCVLQ
Trigger: TTGTAACACGCAGCCCTGTCATCTCCCCCAGGAGGT...CAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTGTGGTCACCCCTGGCTaGGGGGTGTTCCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QMNRHSQICMLASGGLQGVVTPG*GVFLGC
Trigger: GCAGCCCAGGAACACCCCTCAGCCAGGGGTGACCAC...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCAGTCGTGGGGCCCTaGGCCCGACCGCAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: MNYFGLGLELAFIPTARWAVVGP*ARPQGL
Trigger: CAACCCCTGCGGTCGGGCTCAGGGCCCCACGACTGC...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGCAGTCGTGGGGCCCTaGGCCCGACCGCAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAAVVGP*ARPQGL
Trigger: CAACCCCTGCGGTCGGGCTCAGGGCCCCACGACTGC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCACCATGTCACCCCCTATaGTGCGAAGTTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: HLSATRWLGAGSLRHGRSPCHPL*CEVGSS
Trigger: AGAAGATCCAACTTCGCATCATAGGGGGTGACATGG...TGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp AGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCGCTCCCCCAGAACTCTaGGCTGGACCCATCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSASDSTAMSPPMMRSWIAPPEL*AGPIAG
Trigger: ACCAGCGATGGGTCCAGCTCAGAGTTCTGGGGGAGC...GATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR TCA 90 bp CTGAGCTGGACCCATCGCTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGCCCGCAAGTTGTAAATaGGCAGCGTGCCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSWTHRWSRSCPLKATQVPASCK*AACHLG
Trigger: CCCCAGATGGCACGCTGCTCATTTACAACTTGCGGG...CACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR TCA 90 bp GGTGCTGCCACAGCTGTAGGTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATGATTTCTCCCTAGCCCTATaGACTATTTTGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: GAATAVGARVLCLQGVDDFSLAL*TILDWG
Trigger: GCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAA...ATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp CTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCAGCTACTCAGAAGGCTaGCACAGGAGAATCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LRHGRSSGSAGLDWHPPPSYSEG*HRRIKN
Trigger: GTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCT...GGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTCGAACTCCGCGCACTaGTCGGCCCGGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVSNSAH*SARKSR
Trigger: CCGGGACTTCCGGGCCGAGCAGTGCGCGGAGTTCGA...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGACCTCATGGTCGATGGTaGAGAACACCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: GLELAFIPTARWAEREAGPHGRW*RTPGGT
Trigger: AGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGG...TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTCCACGGCCTCCTGGATaGCGGCCCCGTCAGACGAGA +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVPRPPG*RPRQTR
Trigger: TCTCGTCTGACGGGGCCGGCATCCAGGAGGCCGTGG...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACCCCCAGGTGCCAACATaGCAGGCCTGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNPQVPT*QAWSLR
Trigger: CCTCAGTGACCAGGCCTGGCATGTTGGCACCTGGGG...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTGAGAGCCGCACCAACTaGCCCAGGGCTGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVESRTN*PRAACT
Trigger: GGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTC...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTGAGAGCCGCACCAACTaGCCCAGGGCTGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: QMNRHSQICMLASGGLQGESRTN*PRAACT
Trigger: GGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTC...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTGAGAGCCGCACCAACTaGCCCAGGGCTGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCESRTN*PRAACT
Trigger: GGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTC...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CGTGTAGGAGCCCTCATCCCTGGCCCGCAAGTTGTAAATGAGCAGCGTGCCATCGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: RVGALIPGPQVVNEQRAIGWPSF*QAAWDS
Trigger: GGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCC...GATGGCACGCTGCTCATTTACAACTTGCGGGCCAGGGATGAGGGCTCCTACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR GCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCAGGTCGACGCAGTCCCTaGCAGGGTCCCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSGRRSP*QGPWAG
Trigger: CCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACC...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GCTCAGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGCCAGGAGACGGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: AQLSLRQHGHVTPYDAKLPGDGG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCCGTCTCCTGG...CAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGCGCCTGCAGGACTGCTaGCGCCACCATCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRRLQDC*RHHPCG
Trigger: CCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCG...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCGCCTGCAGGACTGCTaGCGCCACCATCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCRLQDC*RHHPCG
Trigger: CCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCG...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGCGAGGGCTCCACACCTaGCAAGCTAATCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWRGLHT*QANPVG
Trigger: TCCTACAGGATTAGCTTGGCAGGTGTGGAGCCCTCG...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555123.5
CDS-3UTR GCA 90 bp GTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCCCATTTCCCTGTTACTaGATTGCCCACAACCCTTCC +
Preference number: 4 (lower is better)
Translates to: VPASSACRGWMIRDPSNCPFPCY*IAHNPS
Trigger: GGAAGGGTTGTGGGCAATGCAGTAACAGGGAAATGG...GCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGTGCGACAAGAGCGGTaGCTCCGGGCGGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFVRQER*LRAGPT
Trigger: CGTGGGCCCCGCCCGGAGCCACCGCTCTTGTCGCAC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCGTGCGACAAGAGCGGTaGCTCCGGGCGGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESVRQER*LRAGPT
Trigger: CGTGGGCCCCGCCCGGAGCCACCGCTCTTGTCGCAC...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCAGAAGTTCTCCCCCTTaGGAATGCAGTTCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: CHSMAGGGKPSARQVIRIRSSPP*ECSSVH
Trigger: GTGAACTGAACTGCATTCCCAAGGGGGAGAACTTCT...GATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCAGGGGCTCCGAGGTaGGGCCCCGGGCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPGAPR*GPGHGV
Trigger: GACTCCATGCCCGGGGCCCCACCTCGGAGCCCCTGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCAGGGGCTCCGAGGTaGGGCCCCGGGCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPGAPR*GPGHGV
Trigger: GACTCCATGCCCGGGGCCCCACCTCGGAGCCCCTGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CGTGTAGGAGCCCTCATCCCTGGCCCGCAAGTTGTAAATGAGCAGCGTGCCATCGGTTACAGGCCTGAATaGCAGGGGGCTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RVGALIPGPQVVNEQRAIGYRPE*QGASQA
Trigger: TGCCTGGGAAGCCCCCTGCCATTCAGGCCTGTAACC...GATGGCACGCTGCTCATTTACAACTTGCGGGCCAGGGATGAGGGCTCCTACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp CACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGGTGGAGCACGCTGCGGTATaGAGCAAAGAACCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: HHPGLVLVQTQPVCRLWVEHAAV*SKEPLS
Trigger: TGAAAGGGGTTCTTTGCTCCATACCGCAGCGTGCTC...CACCCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGCTGCAGCTGGTGTCTCCAACATGCCAGGCCTaGTCACTGAGGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: FYSHSANDQGAIRLQLVSPTCQA*SLRRGQ
Trigger: CTGCCCCCTCCTCAGTGACCAGGCCTGGCATGTTGG...AGACACCAGCTGCAGCCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGGCTCCCGCAGTGGCTaGGCGGCCCAATGGCACAGA +
Preference number: 4 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRGSRSG*AAQWHR
Trigger: TCTGTGCCATTGGGCCGCCCAGCCACTGCGGGAGCC...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTCCACTGCCCTTGACCTaGGCATGCCCCCGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRAPLPLT*ACPRCC
Trigger: ACAGCACCGGGGGCATGCCCAGGTCAAGGGCAGTGG...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp AGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCG +
Preference number: 4 (lower is better)
Translates to: SSASDSTAMSPPMMRSWIFCQAA*DSGAVS
Trigger: CGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAA...GATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp AGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCTCCACCACCCGGGGCTaGTTCTGGTCCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: SSASDSTAMSPPMMRSWISTTRG*FWSKRS
Trigger: GCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGA...GATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTCCGGATCCGCTGGCCTaGACTGGCATCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVPDPLA*TGIHHP
Trigger: CGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGG...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTCTGCCACTCGATGGCTaGGGGCGGGAAGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVLPLDG*GREAFG
Trigger: GCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAG...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCAGCGGACCACACACAATAGCCTaGCCGTATCACCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: QGVDDQGSVELQPVPVSGPHTIA*PYHPLA
Trigger: TGCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGG...TCCGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGACCAGGGTCCCTGGGCTaGGCGGTGGGTGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRPGSLG*AVGAGE
Trigger: CTCACCAGCACCCACCGCCCAGCCCAGGGACCCTGG...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCTTGGCCAGCTCTGGCTaGTCGACGCAGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSASDSTAMSPPMMRSWILASSG*STQSLP
Trigger: TGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAA...GATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CGTGTAGGAGCCCTCATCCCTGGCCCGCAAGTTGTAAATGAGCAGCGTGCCATCACAGTTGGCCAGCTCTaGCTGGTCGACGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RVGALIPGPQVVNEQRAITVGQL*LVDAVP
Trigger: AGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGT...GATGGCACGCTGCTCATTTACAACTTGCGGGCCAGGGATGAGGGCTCCTACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp TGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCCCTATGAACTATTTTaGACTGGGGCTGGAACTAGC +
Preference number: 4 (lower is better)
Translates to: CHSMAGGGKPSARQVIRIPYELF*TGAGTS
Trigger: GCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG...GATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTCTGCGGGAGACGCATTaGGTTAGAGCGGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVLRETH*VRAARG
Trigger: GCCCCGGGCCGCTCTAACCCAATGCGTCTCCCGCAG...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555445.5
3UTR CAA 72 bp TTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTaGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LPQSWACRIKSQ*ASSGWSTQSLP
Trigger: TGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGGCGCTCCCGGAAGCTaGCACCCCCTCCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFGAPGS*HPLHRS
Trigger: GGACCTGTGGAGGGGGTGTCAGCTTCCGGGAGCGCC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGTCCTCCACAGGAGGCTaGGCAGGGTGCCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQSSTGG*AGCPWP
Trigger: GGGCCATGGGCACCCTGCTCAGCCTCCTGTGGAGGA...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCGTACCTGCTCTGCTaGCAGGGGGCCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPYLLC*QGAPGQ
Trigger: CTGCCCTGGGGCCCCCTGTCAGCAGAGCAGGTACGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTCCGTACCTGCTCTGCTaGCAGGGGGCCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSPYLLC*QGAPGQ
Trigger: CTGCCCTGGGGCCCCCTGTCAGCAGAGCAGGTACGG...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGAGCTGGGTCCCTGGGCTaGGGGAAGCGGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRAGSLG*GKRLSS
Trigger: TGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGC...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GCCTGCAGGATCAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGGTGAGGCTGGAAACGTaGACAGCTGGCACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: ACRIKSQLASSGWSTQSLVRLET*TAGTAE
Trigger: TTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCAC...CAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp CATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCAAGATGCAAACACTGCTaGAGGCTACAGAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: HLSATRWLGAGSLRHGRSRCKHC*RLQREA
Trigger: AGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCT...TGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp GTGCCCGCGTCCTCTGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGATGCAAACACTGCTaGAGGCTACAGAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: VPASSACRGWMIRDPSNCRCKHC*RLQREA
Trigger: AGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCT...GCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTGAAGGGTGGCGCTGGTaGTCCGGCATCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCEGWRW*SGISTQ
Trigger: CTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTC...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTGAAGGGTGGCGCTGGTaGTCCGGCATCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVEGWRW*SGISTQ
Trigger: CTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTC...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGCCCCAGGTGTCACTCTaGCGCCTCACCTTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRPQVSL*RLTLGA
Trigger: GGCTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGG...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTCCCCAGGTGTCACTCTaGCGCCTCACCTTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVPQVSL*RLTLGA
Trigger: GGCTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGG...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATCGAACTCCGCGCACTaGTCGGCCCGGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRSNSAH*SARKSR
Trigger: CCGGGACTTCCGGGCCGAGCAGTGCGCGGAGTTCGA...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTCACAGACATCCCTCTTaGCAGGCTCGCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRAHRHPS*QARRAS
Trigger: GGACGCCCTGCGAGCCTGGCAAGAGGGATGTCTGTG...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp GCCTGCAGGATCAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGAGACACTTGTCCTCCTaGTTGGACGAGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: ACRIKSQLASSGWSTQSLRHLSS*LDESSS
Trigger: CGAGCTGGACTCGTCCAAGCAGGAGGACAAGTGTCT...CAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCTGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACGGGGTAGCAGGTCGTaGCGTCACCCCCACACCGCA +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSRGSRS*RHPHTA
Trigger: TGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCG...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCCGCCACACTCCGCGCTaGAGTCACTCCATGAGCCGT +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSRHTPR*SHSMSR
Trigger: ACGGCTCATGGAGTGACTGCAGCGCGGAGTGTGGCG...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACCACGGCCTCCTGGATaGCGGCCCCGTCAGACGAGA +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSPRPPG*RPRQTR
Trigger: TCTCGTCTGACGGGGCCGGCATCCAGGAGGCCGTGG...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp AGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCACGGCATCCAGGGGTTaGTGGCAGGGGTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: SSASDSTAMSPPMMRSWITASRG*WQGCAH
Trigger: ATGTGCACACCCCTGCCAGCAACCCCTGGATGCCGT...GATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTTGCTGGTATGGGGGCTaGTGCAGAGAGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCCWYGG*CREGAG
Trigger: CCCCGCTCCCTCTCTGCAGCAGCCCCCATACCAGCA...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp GTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCCGACCGCAGGGGTTaGTGGTATGGGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VNSWHSRSWSNTHCHKAGPDRRG*WYGGCC
Trigger: GCAGCAGCCCCCATACCAGCAACCCCTGCGGTCGGG...CCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCTGAGGCCCGAGAGATaGCGTGTGGCCATCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCLRPER*RVAIGA
Trigger: TGCCCCGATGGCCACACGGCATCTCTCGGGCCTCAG...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCACTGGGCTCATTCTaGTGGGCCTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRASLGSF*WAWGWW
Trigger: CCACCAGCCCCAGGCCCAGCAGAATGAGCCCAGTGA...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTGAGAGCCGCACCAACTaGCCCAGGGCTGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPESRTN*PRAACT
Trigger: GGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTC...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCTGCCACAGCTGTAGGTaGCCGCGTCCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSCHSCR*PRPLPA
Trigger: TGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCA...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTGCCACAGCTGTAGGTaGCCGCGTCCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRACHSCR*PRPLPA
Trigger: TGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCA...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGGCCTGGCCGGGTGCTaGCACAGCTGTAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETGLAGC*HSCRCP
Trigger: CGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCC...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCGCGGCCTGGCCGGGTaGTGCCACAGCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRGLAG*CHSCRC
Trigger: GCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCGCGGCCTGGCCGGGTaGTGCCACAGCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELARGLAG*CHSCRC
Trigger: GCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGGTCGACGCAGTCCCTaGCAGGGTCCCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFGRRSP*QGPWAG
Trigger: CCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCGGTCGACGCAGTCCCTaGCAGGGTCCCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESGRRSP*QGPWAG
Trigger: CCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACC...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTGCGGGCAGCCCAGTCTaGGCAAGAGCCATGGGCACT +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCAGSPV*ARAMGT
Trigger: AGTGCCCATGGCTCTTGCGCAGACTGGGCTGCCCGC...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GTCCCTGGGCTGAGGGAAGCGGCTCAGCTCAGCCTCAGACAGCACGGCCATGTCCTGCTCATGCACTCTTaGTCCGAGGCAAAGTTATTG +
Preference number: 4 (lower is better)
Translates to: VPGLREAAQLSLRQHGHVLLMHS*SEAKLL
Trigger: CAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAG...GACATGGCCGTGCTGTCTGAGGCTGAGCTGAGCCGCTTCCCTCAGCCCAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACCGCCTGCAGGACTGCTaGCGCCACCATCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHRLQDC*RHHPCG
Trigger: CCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCG...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp GAGGCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCGGGTTCCTGCTCGCCTaGAGGACTGCTGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: EAGNVNSWHSRSWSNTHCGFLLA*RTAAAT
Trigger: GGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCC...GCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCTGCTGGCTGGGTTCCTaGTCGCCTGCAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSCWLGS*SPAGLL
Trigger: CAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCA...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CTGCCTGGCTCCCCTGGTAGGCACTGCACGTGTAGGAGCCCTCATCCCTGGCCCATGCTGTTAACCCTCTaGACCAGATTTAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LPGSPGRHCTCRSPHPWPMLLTL*TRFRAD
Trigger: GTCAGCTCTAAATCTGGTGCAGAGGGTTAACAGCAT...GGGCCAGGGATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGAGCCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCTGCCGCCTCACCTTaGGAGCCGAGGACCCGGGCG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSSAASP*EPRTRA
Trigger: CGCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGA...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCTCTGCCGCCTCACCTTaGGAGCCGAGGACCCGGGCG +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESSAASP*EPRTRA
Trigger: CGCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGA...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCGCTCGTAATGCAGGATaGTGCTGGCTGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSASDSTAMSPPMMRSWIARNAG*CWLLAG
Trigger: CCCTGCCAGCAGCCAGCACCATCCTGCATTACGAGC...GATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGCCAGGGGCTCCGAGGTaGGGCCCCGGGCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: YELFWTGAGTSLHPYCQMPGAPR*GPGHGV
Trigger: GACTCCATGCCCGGGGCCCCACCTCGGAGCCCCTGG...CATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCCCGGGGTTGGGCTCCTaGCTGATGAGCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSPGLGS*LMSSMT
Trigger: GGTCATCGAGCTCATCAGCCAGGAGCCCAACCCCGG...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GTAGAAGCCGCCATCTTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGAGGCCTCATGGTCGATaGTGCAGAACACCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: VEAAIFYSHSANDQGAIRRPHGR*CRTPGG
Trigger: CCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCT...CCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAAGATGGCGGCTTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGACCGGTCAGCTGGCCGTaGCTGGCGCTGGCACATGTG +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRPVSWP*LALAHV
Trigger: CACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGG...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTCCGGTCAGCTGGCCGTaGCTGGCGCTGGCACATGTG +
Preference number: 4 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPPVSWP*LALAHV
Trigger: CACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGG...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATGGAACGCCGGTCAGCTaGCCGTGGCTGGCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNGTPVS*PWLALA
Trigger: TGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCC...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGAACGCCGGTCAGCTaGCCGTGGCTGGCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGTPVS*PWLALA
Trigger: TGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGGAACGCCGGTCAGCTaGCCGTGGCTGGCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERGTPVS*PWLALA
Trigger: TGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCC...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACCTGCCTTCCAGCGCTTaGTCTCCGGGCAAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNLPSSA*SPGKGE
Trigger: TTCACCCTTGCCCGGAGACCAAGCGCTGGAAGGCAG...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCTACACGGAGCGGGACTaGGAGCCTCCTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSYTERD*EPPPQE
Trigger: CTCCTGTGGAGGAGGCTCCCAGTCCCGCTCCGTGTA...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACGGGCTCAGTCAGAGGTaGCCGGTCTTCCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNGLSQR*PVFQGA
Trigger: TGCTCCTTGGAAGACCGGCCACCTCTGACTGAGCCC...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCAGGCTCCCGCAGTGGCTaGGCGGCCCAATGGCACAGA +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSGSRSG*AAQWHR
Trigger: TCTGTGCCATTGGGCCGCCCAGCCACTGCGGGAGCC...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCATGCAGGCTCCCGCAGTaGCTGGGCGGCCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSCRLPQ*LGGPMA
Trigger: TGCCATTGGGCCGCCCAGCCACTGCGGGAGCCTGCA...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp GTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGTGCAGGCTCCCGCAGTaGCTGGGCGGCCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: VNSWHSRSWSNTHCHKAGCRLPQ*LGGPMA
Trigger: TGCCATTGGGCCGCCCAGCCACTGCGGGAGCCTGCA...CCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTGCTGAGGGGTGTTCCTaGGCTGCCCACCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVAEGCS*AAHHWP
Trigger: AGGCCAGTGGTGGGCAGCCCAGGAACACCCCTCAGC...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTGCTGAGGGGTGTTCCTaGGCTGCCCACCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCAEGCS*AAHHWP
Trigger: AGGCCAGTGGTGGGCAGCCCAGGAACACCCCTCAGC...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp GAGGCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCCGAGAGATGCCGTGTaGCCATCGGGGCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: EAGNVNSWHSRSWSNTHCPRDAV*PSGQHP
Trigger: CGGGTGCTGCCCCGATGGCCACACGGCATCTCTCGG...GCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp AGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCCCGAGAGATGCCGTGTaGCCATCGGGGCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: SPMNYFGLGLELAFIPTAPRDAV*PSGQHP
Trigger: CGGGTGCTGCCCCGATGGCCACACGGCATCTCTCGG...GGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCAGCCCCGGCACTCACTaGGCTCATTCTGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSSPGTH*AHSAGP
Trigger: AGGCCCAGCAGAATGAGCCCAGTGAGTGCCGGGGCT...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCTGGGAGTCGCGGCCTaGCCGGGTGCTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFLGVAA*PGAATA
Trigger: AGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGACTGGGAGTCGCGGCCTaGCCGGGTGCTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERLGVAA*PGAATA
Trigger: AGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAG...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACCGGATCCGCTGGCCTaGACTGGCATCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSPDPLA*TGIHHP
Trigger: CGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGG...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGTAGAAGCCGCCATCTTCGCTGCAGCTGGTGTCTaGGAGAAGAGACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LVSVLPIESDTGVEAAIFAAAGV*EKRQAA
Trigger: GGCAGCCTGTCTCTTCTCCCAGACACCAGCTGCAGC...GAAGATGGCGGCTTCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGCCAGGGTCCCTGGGCTaGGCGGTGGGTGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETPGSLG*AVGAGE
Trigger: CTCACCAGCACCCACCGCCCAGCCCAGGGACCCTGG...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCAGGGTCCCTGGGCTaGGCGGTGGGTGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPGSLG*AVGAGE
Trigger: CTCACCAGCACCCACCGCCCAGCCCAGGGACCCTGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGGGATCAAATCACAGTTaGCCAGCTCTGGCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWGSNHS*PALAGR
Trigger: TCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCC...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp CATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATGGCACAGCAGAAGCTaGAGTAATACTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: HLSATRWLGAGSLRHGRSWHSRS*SNTHCH
Trigger: GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCA...TGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCAGAAGCCCCAGGCTaGGGACGACGGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPEAPG*GRRGPW
Trigger: CCATGGGCCCCGTCGTCCCCAGCCTGGGGCTTCTGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCAGTCCAGGGGCCCTaGACCCAAGCTCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPVQGP*TQAPAP
Trigger: GGGGGCAGGAGCTTGGGTCCAGGGCCCCTGGACTGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGCCAGTCCAGGGGCCCTaGACCCAAGCTCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: MNYFGLGLELAFIPTARWPVQGP*TQAPAP
Trigger: GGGGGCAGGAGCTTGGGTCCAGGGCCCCTGGACTGG...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATCCAGTCCAGGGGCCCTaGACCCAAGCTCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNPVQGP*TQAPAP
Trigger: GGGGGCAGGAGCTTGGGTCCAGGGCCCCTGGACTGG...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGGCGCTCCCGGAAGCTaGCACCCCCTCCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIGAPGS*HPLHRS
Trigger: GGACCTGTGGAGGGGGTGTCAGCTTCCGGGAGCGCC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGTGGTCCAGTGCCCATTaGGGTAGTATTCCCCACGAA +
Preference number: 4 (lower is better)
Translates to: GLGLELAFIPTARWAEREWSSAH*GSIPHE
Trigger: TTCGTGGGGAATACTACCTCAATGGGCACTGGACCA...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTCCTCCACAGGAGGCTaGGCAGGGTGCCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELASSTGG*AGCPWP
Trigger: GGGCCATGGGCACCCTGCTCAGCCTCCTGTGGAGGA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCTCCTCCACAGGAGGCTaGGCAGGGTGCCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: AEAGVILIATKLGLQDQISSTGG*AGCPWP
Trigger: GGGCCATGGGCACCCTGCTCAGCCTCCTGTGGAGGA...GATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCTCCTCCACAGGAGGCTaGGCAGGGTGCCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESSSTGG*AGCPWP
Trigger: GGGCCATGGGCACCCTGCTCAGCCTCCTGTGGAGGA...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCCAGGCCTGGTCACTaGGGAGGGGGCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPARPGH*GGGSPH
Trigger: ATGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGGC...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGGCAGCCTTGCCACTaGGGCCCGAGAGATGCCGTG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGQPCH*GPRDAV
Trigger: CACGGCATCTCTCGGGCCTCAGTGGCAAGGCTGCCC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGGGCAGCCTTGCCACTaGGGCCCGAGAGATGCCGTG +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERGQPCH*GPRDAV
Trigger: CACGGCATCTCTCGGGCCTCAGTGGCAAGGCTGCCC...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTCCGTACCTGCTCTGCTaGCAGGGGGCCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLPYLLC*QGAPGQ
Trigger: CTGCCCTGGGGCCCCCTGTCAGCAGAGCAGGTACGG...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGCTGGGTCCCTGGGCTaGGGGAAGCGGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFAGSLG*GKRLSS
Trigger: TGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GTCCCTGGGCTGAGGGAAGCGGCTCAGCTCAGCCTCAGACAGCACGGCCATGTCGAGAGACTAGAGCAATaGACCATCGCTGATTTTAGC +
Preference number: 4 (lower is better)
Translates to: VPGLREAAQLSLRQHGHVERLEQ*TIADFS
Trigger: GCTAAAATCAGCGATGGTTCATTGCTCTAGTCTCTC...GACATGGCCGTGCTGTCTGAGGCTGAGCTGAGCCGCTTCCCTCAGCCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR TCA 90 bp CACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGGTGTACACAGGTGTCAGATaGACCGTCACAGCCAGATTT +
Preference number: 4 (lower is better)
Translates to: HHPGLVLVQTQPVCRLWVYTGVR*TVTARF
Trigger: AAATCTGGCTGTGACGGTTCATCTGACACCTGTGTA...CACCCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR TCA 90 bp GGCTCCCCTGGTAGGCACTGCACGTGTAGGAGCCCTCATCCCTGGCCCGCAAGTATGAGTAGAGAAGACTaGGAAGTATCACTCACCCGT +
Preference number: 4 (lower is better)
Translates to: GSPGRHCTCRSPHPWPASMSRED*EVSLTR
Trigger: ACGGGTGAGTGATACTTCTCAGTCTTCTCTACTCAT...ACTTGCGGGCCAGGGATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCGGGGCAGCTCTCCGTaGGACAAGAGCGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELARGSSP*DKSGGS
Trigger: GGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGCGGGGCAGCTCTCCGTaGGACAAGAGCGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETRGSSP*DKSGGS
Trigger: GGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCG...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GCTCAGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGAGACACTTGTCCTCCTaGTTGGACGAGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: AQLSLRQHGHVTPYDAKLRHLSS*LDESSS
Trigger: CGAGCTGGACTCGTCCAAGCAGGAGGACAAGTGTCT...CAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCGGGGTAGCAGGTCGTaGCGTCACCCCCACACCGCA +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLRGSRS*RHPHTA
Trigger: TGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCGGGGTAGCAGGTCGTaGCGTCACCCCCACACCGCA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRGSRS*RHPHTA
Trigger: TGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTCGCCACACTCCGCGCTaGAGTCACTCCATGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVRHTPR*SHSMSR
Trigger: ACGGCTCATGGAGTGACTGCAGCGCGGAGTGTGGCG...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACCCTCATGGTCGATGGTaGAGAACACCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNPHGRW*RTPGGT
Trigger: AGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGG...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp AGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCGGCAAGGGTGAAGATTaGAGGAACGCCGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSASDSTAMSPPMMRSWIGKGED*RNAGQL
Trigger: CAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCC...GATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCACGGCCTCCTGGATaGCGGCCCCGTCAGACGAGA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPRPPG*RPRQTR
Trigger: TCTCGTCTGACGGGGCCGGCATCCAGGAGGCCGTGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCACACTTTCTCCTGCTACCACACACAATAGCCTGGCCGTATCACCCTCTGGCACAGGCTTGGAGTGCTaGAGGCTCCCGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FTLSPATTHNSLAVSPSGTGLEC*RLPQWL
Trigger: CAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGT...GCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGGTAGCAGGAGAAAGTGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR GCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGGGCTGACAGGTGGGTaGCTTGGTCGCCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERGLTGG*LGRPWG
Trigger: ACCCCAGGGGCGACCAAGGCACCCACCTGTCAGCCC...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGATGGTATGGGGGCTGCTaGAGAGAGGGAGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERWYGGC*REGAGP
Trigger: GGGCCCCGCTCCCTCTCTGCAGCAGCCCCCATACCA...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTCGTGAGGACTGTGTCTaGAGTCGTGGGGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVREDCV*SRGALS
Trigger: GCTCAGGGCCCCACGACTGCAGACACAGTCCTCACG...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCGGCAGCACCCGTACCTaGTCTGCTGACAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESGSTRT*SADRGP
Trigger: GGGCCCCCTGTCAGCAGAGCAGGTACGGGTGCTGCC...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACCCTTGACCTGGGCATaGCCCCGGTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSPLTWA*PRCCHH
Trigger: GTGGTGACAGCACCGGGGGCATGCCCAGGTCAAGGG...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCATGCCCCAGGGCTGCCTaGACCAACGAGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSCPRAA*TNEGST
Trigger: TGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCA...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGGAGAGCCGCACCAACTaGCCCAGGGCTGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVESRTN*PRAACT
Trigger: GGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTC...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGAGAGCCGCACCAACTaGCCCAGGGCTGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFESRTN*PRAACT
Trigger: GGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGGCCTGGCCGGGTGCTaGCACAGCTGTAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIGLAGC*HSCRCP
Trigger: CGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCGGCCTGGCCGGGTGCTaGCACAGCTGTAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPGLAGC*HSCRCP
Trigger: CGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCC...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGGTGCTGCGGCTGACTaGCTGGCTCCCCTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETGAAAD*LAPLVG
Trigger: GCCTACCAGGGGAGCCAGGCAGTCAGCCGCAGCACC...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGTGCTGCGGCTGACTaGCTGGCTCCCCTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGAAAD*LAPLVG
Trigger: GCCTACCAGGGGAGCCAGGCAGTCAGCCGCAGCACC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGGTGCTGCGGCTGACTaGCTGGCTCCCCTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERGAAAD*LAPLVG
Trigger: GCCTACCAGGGGAGCCAGGCAGTCAGCCGCAGCACC...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGGGTCGACGCAGTCCCTaGCAGGGTCCCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWGRRSP*QGPWAG
Trigger: CCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACC...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp GTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGGCGGGCAGCCCAGTCTaGGCAAGAGCCATGGGCACT +
Preference number: 4 (lower is better)
Translates to: VNSWHSRSWSNTHCHKAGAGSPV*ARAMGT
Trigger: AGTGCCCATGGCTCTTGCGCAGACTGGGCTGCCCGC...CCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCGCCTGCAGGACTGCTaGCGCCACCATCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRLQDC*RHHPCG
Trigger: CCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGGCTCGCCTGCAGGACTaGTGCCGCCACCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQARLQD*CRHHPC
Trigger: ACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGC...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGGTTCCTGCTCGCCTaGAGGACTGCTGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGFLLA*RTAAAT
Trigger: GGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTGCTGGCTGGGTTCCTaGTCGCCTGCAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVCWLGS*SPAGLL
Trigger: CAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCA...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGTAGAAGCCGCCATCTTCCCAGGCTGTTGGTCTTaGCGCCAGAGACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: LVSVLPIESDTGVEAAIFPGCWS*RQRPPE
Trigger: TTCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGG...GAAGATGGCGGCTTCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR CCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGTCTGCCGCCTCACCTTaGGAGCCGAGGACCCGGGCG +
Preference number: 4 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWSAASP*EPRTRA
Trigger: CGCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGA...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTCTGCCGCCTCACCTTaGGAGCCGAGGACCCGGGCG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFISAASP*EPRTRA
Trigger: CGCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACGGGGCCCACGCAGCTaGAGCCTCCATCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSRGPRS*SLHLSS
Trigger: AGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCCG...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGTGCGACAAGAGCGGTaGCTCCGGGCGGGGCCCACG +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSVRQER*LRAGPT
Trigger: CGTGGGCCCCGCCCGGAGCCACCGCTCTTGTCGCAC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACGATACCGCCGCCCCTaGAACTCCGCTCCGTCGAAC +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSRYRRP*NSAPSN
Trigger: GTTCGACGGAGCGGAGTTCCAGGGGCGGCGGTATCG...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCGCTCGTAATGCAGGATaGTGCTGGCTGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSARNAG*CWLLAG
Trigger: CCCTGCCAGCAGCCAGCACCATCCTGCATTACGAGC...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCGGTCAGCTGGCCGTaGCTGGCGCTGGCACATGTG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPVSWP*LALAHV
Trigger: CACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTCCGGTCAGCTGGCCGTaGCTGGCGCTGGCACATGTG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSPVSWP*LALAHV
Trigger: CACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGG...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGCCGGTCAGCTGGCCGTaGCTGGCGCTGGCACATGTG +
Preference number: 4 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVPVSWP*LALAHV
Trigger: CACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGG...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTGGAACGCCGGTCAGCTaGCCGTGGCTGGCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLILAQNTSLIQQDLACPGTPVS*PWLALA
Trigger: TGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCC...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCTTCGGGCTCAGTCAGAGGTaGCCGGTCTTCCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SASDSTAMSPPMMRSWIFGLSQR*PVFQGA
Trigger: TGCTCCTTGGAAGACCGGCCACCTCTGACTGAGCCC...GAAGATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTGGCTCCCGCAGTGGCTaGGCGGCCCAATGGCACAGA +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLGSRSG*AAQWHR
Trigger: TCTGTGCCATTGGGCCGCCCAGCCACTGCGGGAGCC...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGCTCCCGCAGTGGCTaGGCGGCCCAATGGCACAGA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGSRSG*AAQWHR
Trigger: TCTGTGCCATTGGGCCGCCCAGCCACTGCGGGAGCC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGAGACAGGTGGGTGCCTTaGTCGCCCCTGGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRDRWVP*SPLGSP
Trigger: AGGTGACCCCAGGGGCGACCAAGGCACCCACCTGTC...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCCAGGGCTGACAGGTaGGTGCCTTGGTCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPRADR*VPWSPL
Trigger: CAGGGGCGACCAAGGCACCCACCTGTCAGCCCTGGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCTGTGTCTGCAGTCGTaGGGCCCTGAGCCCGACCGC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELALCLQS*GPEPDR
Trigger: GCGGTCGGGCTCAGGGCCCCACGACTGCAGACACAG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCGAGAGATGCCGTGTaGCCATCGGGGCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPRDAV*PSGQHP
Trigger: CGGGTGCTGCCCCGATGGCCACACGGCATCTCTCGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GAGGCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCCACTGCCCTTGACCTaGGCATGCCCCCGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: EAGNVNSWHSRSWSNTHCPLPLT*ACPRCC
Trigger: ACAGCACCGGGGGCATGCCCAGGTCAAGGGCAGTGG...GCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCTCTGCCTGCAGGGGGTaGATGATCAGGGATCCGTCG +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSSACRG*MIRDPS
Trigger: CGACGGATCCCTGATCATCCACCCCCTGCAGGCAGA...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCTGGGAGTCGCGGCCTaGCCGGGTGCTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFILGVAA*PGAATA
Trigger: AGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTCCGCTGGCCTGGACTaGCATCCACCACCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFSAGLD*HPPPGA
Trigger: AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGATCCGCTGGCCTGGACTaGCATCCACCACCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERSAGLD*HPPPGA
Trigger: AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGA...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGACCGGATCCGCTGGCCTaGACTGGCATCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERPDPLA*TGIHHP
Trigger: CGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGG...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTCCGGATCCGCTGGCCTaGACTGGCATCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSPDPLA*TGIHHP
Trigger: CGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGG...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCCGGATCCGCTGGCCTaGACTGGCATCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLPDPLA*TGIHHP
Trigger: CGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCTGCCACTCGATGGCTaGGGGCGGGAAGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFLPLDG*GREAFG
Trigger: GCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCTGCCACTCGATGGCTaGGGGCGGGAAGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESLPLDG*GREAFG
Trigger: GCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGCTCTCTGCCACTCGATaGCTGGGGGCGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRLSATR*LGAGSL
Trigger: AAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTGTGCCATCTGGGGACTaGTGGACACGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRAVPSGD*WTRWPS
Trigger: TGATGGCCACCGTGTCCACCAGTCCCCAGATGGCAC...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCCTGGGCTGGGCGGTaGGTGCTGGTGAGACCACCT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPWAGR*VLVRPP
Trigger: AGGTGGTCTCACCAGCACCCACCGCCCAGCCCAGGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCAGAAGCCCCAGGCTaGGGACGACGGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPEAPG*GRRGPW
Trigger: CCATGGGCCCCGTCGTCCCCAGCCTGGGGCTTCTGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGCCTGGCCCAGGCTGTTaGTCTTGCCGCCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRPGPGC*SCRQRP
Trigger: TGGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGG...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACAAGCTCCTGCCCCCATaGCCATTCTCCAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNKLLPP*PFSKGL
Trigger: CAGGCCTTTGGAGAATGGCCATGGGGGCAGGAGCTT...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCTCCCGCAGCTGTCCTaGGCGCGGGCGAGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFLPQLS*ARARVC
Trigger: ACACACTCTCGCCCGCGCCCAGGACAGCTGCGGGAG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS-3UTR TCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTGCTGCAGTCACTCCATaGGCCGTGGCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVAAVTP*AVAPAE
Trigger: TTCAGCTGGAGCCACGGCTCATGGAGTGACTGCAGC...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGGTCTCCGGGCAAGGGTaGAGATTGCAGGAACGCCGG +
Preference number: 4 (lower is better)
Translates to: VNSWHSRSWSNTHCHKAGVSGQG*RLQERR
Trigger: CCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGAC...CCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTCGCCAACGCCACAACTaGCAGAACACTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVRQRHN*QNTLPR
Trigger: CCTGGGGAGAGTGTTCTGTCAGTTGTGGCGTTGGCG...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCCTGGCCTCTGGAGTCTaGGGCAGGGGACTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AEAGVILIATKLGLQDQILASGV*GRGLLR
Trigger: CCTCAGGAGTCCCCTGCCTCAGACTCCAGAGGCCAG...GATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCTGGCCTCTGGAGTCTaGGGCAGGGGACTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELALASGV*GRGLLR
Trigger: CCTCAGGAGTCCCCTGCCTCAGACTCCAGAGGCCAG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGCTGGCCTCTGGAGTCTaGGGCAGGGGACTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETLASGV*GRGLLR
Trigger: CCTCAGGAGTCCCCTGCCTCAGACTCCAGAGGCCAG...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTGTGGTCACCCCTGGCTaGGGGGTGTTCCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLVVTPG*GVFLGC
Trigger: GCAGCCCAGGAACACCCCTCAGCCAGGGGTGACCAC...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGTGGTCACCCCTGGCTaGGGGGTGTTCCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIVVTPG*GVFLGC
Trigger: GCAGCCCAGGAACACCCCTCAGCCAGGGGTGACCAC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCGCAGTCGTGGGGCCCTaGGCCCGACCGCAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCAVVGP*ARPQGL
Trigger: CAACCCCTGCGGTCGGGCTCAGGGCCCCACGACTGC...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCGGGCAGCCTTGCCACTaGGGCCCGAGAGATGCCGTG +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPGQPCH*GPRDAV
Trigger: CACGGCATCTCTCGGGCCTCAGTGGCAAGGCTGCCC...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCAGAAGCCACTGCCCTTaGCCTGGGCATGCCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRSHCP*PGHAPG
Trigger: ACCGGGGGCATGCCCAGGTCAAGGGCAGTGGCTTCT...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCGGGGCAGTGTCGTCTaGGCAGGAGAGCCGCACCAA +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESRGSVV*AGEPHQ
Trigger: TTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGACGGGGCAGTGTCGTCTaGGCAGGAGAGCCGCACCAA +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERRGSVV*AGEPHQ
Trigger: TTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCG...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TTCACACTTTCTCCTGCTACCACACACAATAGCCTGGCCGTATCACCCTCTGGCCCTGCAGGGGGTGGATaGTCAGGGATCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: FTLSPATTHNSLAVSPSGPAGGG*SGIRRT
Trigger: AGTTCGACGGATCCCTGATCATCCACCCCCTGCAGG...GCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGGTAGCAGGAGAAAGTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGCTGGGTCCCTGGGCTaGGGGAAGCGGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIAGSLG*GKRLSS
Trigger: TGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGCGGTGGGTGCTGGTaGGACCACCTTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGGGCW*DHLHLG
Trigger: ACCGAGGTGAAGGTGGTCTCACCAGCACCCACCGCC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGGCGGTGGGTGCTGGTaGGACCACCTTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERGGGCW*DHLHLG
Trigger: ACCGAGGTGAAGGTGGTCTCACCAGCACCCACCGCC...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTGGCGGTGGGTGCTGGTaGGACCACCTTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLGGGCW*DHLHLG
Trigger: ACCGAGGTGAAGGTGGTCTCACCAGCACCCACCGCC...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCAGACGGAGGTTGCAGTaGGCTGAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSRRRLQ*AEIAPL
Trigger: CAATGGCGCGATCTCAGCTCACTGCAACCTCCGTCT...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGAAGGGTGGCGCTGGTaGTCCGGCATCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAEGWRW*SGISTQ
Trigger: CTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGAAGGGTGGCGCTGGTaGTCCGGCATCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFEGWRW*SGISTQ
Trigger: CTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTGGCTGGAGAAGCGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCGWRSA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCGCTTCTCCAGCC...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTCGAACTCCGCGCACTaGTCGGCCCGGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFISNSAH*SARKSR
Trigger: CCGGGACTTCCGGGCCGAGCAGTGCGCGGAGTTCGA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTCGAACTCCGCGCACTaGTCGGCCCGGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPSNSAH*SARKSR
Trigger: CCGGGACTTCCGGGCCGAGCAGTGCGCGGAGTTCGA...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTCACAGACATCCCTCTTaGCAGGCTCGCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPHRHPS*QARRAS
Trigger: GGACGCCCTGCGAGCCTGGCAAGAGGGATGTCTGTG...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCGGGGTAGCAGGTCGTaGCGTCACCCCCACACCGCA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIRGSRS*RHPHTA
Trigger: TGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTCAGCCAGGAAGTTCCTaGTGGCAGCAGCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: QMNRHSQICMLASGGLQGQPGSS*WQQPRR
Trigger: TCGACGAGGCTGCTGCCAGCAGGAACTTCCTGGCTG...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTCCTCATGGTCGATGGTaGAGAACACCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRAPHGRW*RTPGGT
Trigger: AGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGG...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTGGGTGCCCATGGCCCTaGCTTCCAGCGCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLGCPWP*LPALGL
Trigger: GAGACCAAGCGCTGGAAGGCAGGGCCATGGGCACCC...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGGTGCCCATGGCCCTaGCTTCCAGCGCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGCPWP*LPALGL
Trigger: GAGACCAAGCGCTGGAAGGCAGGGCCATGGGCACCC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGGGTGCCCATGGCCCTaGCTTCCAGCGCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFGCPWP*LPALGL
Trigger: GAGACCAAGCGCTGGAAGGCAGGGCCATGGGCACCC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCCCCGTCAGACGAGATaGAGTACACGGAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCPRQTR*STRSGT
Trigger: AGTCCCGCTCCGTGTACTGCATCTCGTCTGACGGGG...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTAGCATAGACCCCAGGTaGCAACATGCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRASIDPR*QHARPG
Trigger: ACCAGGCCTGGCATGTTGGCACCTGGGGTCTATGCT...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCTGTCGCCTCCGAGTaGCCGAGCTGCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPVASE*PSCSSW
Trigger: CCAAGAGCTGCAGCTCGGGCACTCGGAGGCGACAGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCTGTCGCCTCCGAGTaGCCGAGCTGCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPVASE*PSCSSW
Trigger: CCAAGAGCTGCAGCTCGGGCACTCGGAGGCGACAGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCATCCACAGGCTTGGAGTaGTGCAGGCTCCCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSSTGLE*CRLPQW
Trigger: CCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGA...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGGGTGTTCCTGGGCTaGCCACCACTGGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGVFLG*PPLASG
Trigger: TCCAGAGGCCAGTGGTGGGCAGCCCAGGAACACCCC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCGGGGTGTTCCTGGGCTaGCCACCACTGGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESGVFLG*PPLASG
Trigger: TCCAGAGGCCAGTGGTGGGCAGCCCAGGAACACCCC...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGGGCTGACAGGTGGGTaGCTTGGTCGCCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIGLTGG*LGRPWG
Trigger: ACCCCAGGGGCGACCAAGGCACCCACCTGTCAGCCC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTGGGCTGACAGGTGGGTaGCTTGGTCGCCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLGLTGG*LGRPWG
Trigger: ACCCCAGGGGCGACCAAGGCACCCACCTGTCAGCCC...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTTGGTATGGGGGCTGCTaGAGAGAGGGAGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLWYGGC*REGAGP
Trigger: GGGCCCCGCTCCCTCTCTGCAGCAGCCCCCATACCA...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTGGTATGGGGGCTGCTaGAGAGAGGGAGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIWYGGC*REGAGP
Trigger: GGGCCCCGCTCCCTCTCTGCAGCAGCCCCCATACCA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTGCTGGTATGGGGGCTaGTGCAGAGAGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELACWYGG*CREGAG
Trigger: CCCCGCTCCCTCTCTGCAGCAGCCCCCATACCAGCA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGATGCTGGTATGGGGGCTaGTGCAGAGAGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERCWYGG*CREGAG
Trigger: CCCCGCTCCCTCTCTGCAGCAGCCCCCATACCAGCA...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCCGACCGCAGGGGTTaGTGGTATGGGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPDRRG*WYGGCC
Trigger: GCAGCAGCCCCCATACCAGCAACCCCTGCGGTCGGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCCCCGACCGCAGGGGTTaGTGGTATGGGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPPDRRG*WYGGCC
Trigger: GCAGCAGCCCCCATACCAGCAACCCCTGCGGTCGGG...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCTGAGGCCCGAGAGATaGCGTGTGGCCATCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFLRPER*RVAIGA
Trigger: TGCCCCGATGGCCACACGGCATCTCTCGGGCCTCAG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGGCAGCACCCGTACCTaGTCTGCTGACAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIGSTRT*SADRGP
Trigger: GGGCCCCCTGTCAGCAGAGCAGGTACGGGTGCTGCC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCCTTGACCTGGGCATaGCCCCGGTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPLTWA*PRCCHH
Trigger: GTGGTGACAGCACCGGGGGCATGCCCAGGTCAAGGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCCTTGACCTGGGCATaGCCCCGGTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPLTWA*PRCCHH
Trigger: GTGGTGACAGCACCGGGGGCATGCCCAGGTCAAGGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTGCCCCAGGGCTGCCTaGACCAACGAGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELACPRAA*TNEGST
Trigger: TGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTGCCCCAGGGCTGCCTaGACCAACGAGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLCPRAA*TNEGST
Trigger: TGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCA...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGCAACTGCCCCAGGGCTaGCTGCACCAACGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETQLPQG*LHQRGL
Trigger: GAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTG...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCAACTGCCCCAGGGCTaGCTGCACCAACGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAQLPQG*LHQRGL
Trigger: GAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGGTGCCCGCGTCCTCTaGCTGCAGGGGGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETGARVL*LQGVDD
Trigger: ATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACC...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTGGTGCCCGCGTCCTCTaGCTGCAGGGGGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLGARVL*LQGVDD
Trigger: ATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACC...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGTGCCCGCGTCCTCTaGCTGCAGGGGGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGARVL*LQGVDD
Trigger: ATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTTGCCACAGCTGTAGGTaGCCGCGTCCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPCHSCR*PRPLPA
Trigger: TGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCA...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGGCTGCCCATCTCTCTaGCACTCGATGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFGCPSL*HSMAGG
Trigger: GCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTGGCTGCCCATCTCTCTaGCACTCGATGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLGCPSL*HSMAGG
Trigger: GCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCC...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGGCTGCCCATCTCTCTaGCACTCGATGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERGCPSL*HSMAGG
Trigger: GCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCC...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGGCTGCCCATCTCTCTaGCACTCGATGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETGCPSL*HSMAGG
Trigger: GCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCC...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCAGGGAGCCATCAGGCTaGAGCTGGTGTCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSREPSG*SWCLGE
Trigger: TTCTCCCAGACACCAGCTGCAGCCTGATGGCTCCCT...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTGGTGCTGCGGCTGACTaGCTGGCTCCCCTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLGAAAD*LAPLVG
Trigger: GCCTACCAGGGGAGCCAGGCAGTCAGCCGCAGCACC...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACGGTCGACGCAGTCCCTaGCAGGGTCCCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYGRRSP*QGPWAG
Trigger: CCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACC...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGTGGAGTAATACTCATTaGCACAAAGCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWWSNTH*HKAGPA
Trigger: TGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGCGGGCAGCCCAGTCTaGGCAAGAGCCATGGGCACT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAAGSPV*ARAMGT
Trigger: AGTGCCCATGGCTCTTGCGCAGACTGGGCTGCCCGC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCGGGCAGCCCAGTCTaGGCAAGAGCCATGGGCACT +
Preference number: 4 (lower is better)
Translates to: PSPMNYFGLGLELAFIPTAGSPV*ARAMGT
Trigger: AGTGCCCATGGCTCTTGCGCAGACTGGGCTGCCCGC...AGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCGCCTGCAGGACTGCTaGCGCCACCATCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIRLQDC*RHHPCG
Trigger: CCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCGCCTGCAGGACTGCTaGCGCCACCATCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFRLQDC*RHHPCG
Trigger: CCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCG...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGCTCGCCTGCAGGACTaGTGCCGCCACCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAARLQD*CRHHPC
Trigger: ACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGGGTTCCTGCTCGCCTaGAGGACTGCTGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIGFLLA*RTAAAT
Trigger: GGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGTCCCTGTTACTGCATTaGCCACAACCCTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: GLGLELAFIPTARWAERESLLLH*PQPFPI
Trigger: AATGGGGAAGGGTTGTGGGCAATGCAGTAACAGGGA...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCGGGGCCCACGCAGCTaGAGCCTCCATCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELARGPRS*SLHLSS
Trigger: AGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCCG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCGGGGCCCACGCAGCTaGAGCCTCCATCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRGPRS*SLHLSS
Trigger: AGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCCG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGACGGGGCCCACGCAGCTaGAGCCTCCATCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERRGPRS*SLHLSS
Trigger: AGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCCG...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATCGATACCGCCGCCCCTaGAACTCCGCTCCGTCGAAC +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNRYRRP*NSAPSN
Trigger: GTTCGACGGAGCGGAGTTCCAGGGGCGGCGGTATCG...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTCGATACCGCCGCCCCTaGAACTCCGCTCCGTCGAAC +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSRYRRP*NSAPSN
Trigger: GTTCGACGGAGCGGAGTTCCAGGGGCGGCGGTATCG...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCAGGGGCTCCGAGGTaGGGCCCCGGGCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPGAPR*GPGHGV
Trigger: GACTCCATGCCCGGGGCCCCACCTCGGAGCCCCTGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGATCAGCTGGCCGTGGCTaGCGCTGGCACATGTGGTCG +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERSAGRG*RWHMWS
Trigger: CGACCACATGTGCCAGCGCCAGCCACGGCCAGCTGA...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTCAGCTGGCCGTGGCTaGCGCTGGCACATGTGGTCG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELASAGRG*RWHMWS
Trigger: CGACCACATGTGCCAGCGCCAGCCACGGCCAGCTGA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCAGCTGGCCGTGGCTaGCGCTGGCACATGTGGTCG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSSAGRG*RWHMWS
Trigger: CGACCACATGTGCCAGCGCCAGCCACGGCCAGCTGA...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTTCCTCCACGGCCTCCTaGATGCCGGCCCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLSSTAS*MPAPSD
Trigger: GTCTGACGGGGCCGGCATCCAGGAGGCCGTGGAGGA...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTCCTCCACGGCCTCCTaGATGCCGGCCCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFISSTAS*MPAPSD
Trigger: GTCTGACGGGGCCGGCATCCAGGAGGCCGTGGAGGA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTTCCTCCACGGCCTCCTaGATGCCGGCCCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFSSTAS*MPAPSD
Trigger: GTCTGACGGGGCCGGCATCCAGGAGGCCGTGGAGGA...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTGGGCTCAGTCAGAGGTaGCCGGTCTTCCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QMNRHSQICMLASGGLQGGLSQR*PVFQGA
Trigger: TGCTCCTTGGAAGACCGGCCACCTCTGACTGAGCCC...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTGCAGGCTCCCGCAGTaGCTGGGCGGCCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFICRLPQ*LGGPMA
Trigger: TGCCATTGGGCCGCCCAGCCACTGCGGGAGCCTGCA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGGCTGAGGGGTGTTCCTaGGCTGCCCACCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVAEGCS*AAHHWP
Trigger: AGGCCAGTGGTGGGCAGCCCAGGAACACCCCTCAGC...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGCCCTGTGGTCACCCCTaGCTGAGGGGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVPCGHP*LRGVPG
Trigger: CCCAGGAACACCCCTCAGCCAGGGGTGACCACAGGG...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCCTGTGGTCACCCCTaGCTGAGGGGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPCGHP*LRGVPG
Trigger: CCCAGGAACACCCCTCAGCCAGGGGTGACCACAGGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCCCTGTGGTCACCCCTaGCTGAGGGGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLPCGHP*LRGVPG
Trigger: CCCAGGAACACCCCTCAGCCAGGGGTGACCACAGGG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGCCTCGTTCTCCCCTGTaGTCACCCCTGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: MNYFGLGLELAFIPTARWPRSPL*SPLAEG
Trigger: CCCCTCAGCCAGGGGTGACCACAGGGGAGAACGAGG...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCTCGTTCTCCCCTGTaGTCACCCCTGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPRSPL*SPLAEG
Trigger: CCCCTCAGCCAGGGGTGACCACAGGGGAGAACGAGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCTCGTTCTCCCCTGTaGTCACCCCTGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPRSPL*SPLAEG
Trigger: CCCCTCAGCCAGGGGTGACCACAGGGGAGAACGAGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCTCGTTCTCCCCTGTaGTCACCCCTGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPRSPL*SPLAEG
Trigger: CCCCTCAGCCAGGGGTGACCACAGGGGAGAACGAGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTGCCTTGGTCGCCCCTaGGGTCACCTCGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFCLGRP*GHLVLP
Trigger: GGGGAGAACGAGGTGACCCCAGGGGCGACCAAGGCA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGACAGGTGGGTGCCTTaGTCGCCCCTGGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFDRWVP*SPLGSP
Trigger: AGGTGACCCCAGGGGCGACCAAGGCACCCACCTGTC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCACTGCCCTTGACCTaGGCATGCCCCCGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPLPLT*ACPRCC
Trigger: ACAGCACCGGGGGCATGCCCAGGTCAAGGGCAGTGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCACTGCCCTTGACCTaGGCATGCCCCCGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPLPLT*ACPRCC
Trigger: ACAGCACCGGGGGCATGCCCAGGTCAAGGGCAGTGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACGAAGTTGGATCTTCTaGGAGTCGCGGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSRSWIF*ESRPGR
Trigger: CCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCG...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTACCCGGGGCTGGTTCTaGTCCAAACGCAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRATRGWF*SKRSLF
Trigger: AAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGT...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACTCCGCTGGCCTGGACTaGCATCCACCACCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNSAGLD*HPPPGA
Trigger: AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGA...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCGGATCCGCTGGCCTaGACTGGCATCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPDPLA*TGIHHP
Trigger: CGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCTGCCACTCGATGGCTaGGGGCGGGAAGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFILPLDG*GREAFG
Trigger: GCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACCATCTGGGGACTGGTaGACACGGTGGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSPSGDW*TRWPSA
Trigger: GGCTGATGGCCACCGTGTCCACCAGTCCCCAGATGG...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCCCTGGGCTGGGCGGTaGGTGCTGGTGAGACCACCT +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFPWAGR*VLVRPP
Trigger: AGGTGGTCTCACCAGCACCCACCGCCCAGCCCAGGG...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCAGGGTCCCTGGGCTaGGCGGTGGGTGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSPGSLG*AVGAGE
Trigger: CTCACCAGCACCCACCGCCCAGCCCAGGGACCCTGG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTACAGTTGGCCAGCTCTaGCTGGTCGACGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVTVGQL*LVDAVP
Trigger: AGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGT...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp AGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCAGCGGAGTGGCACAGCAGAAGCTaGAGTAATACTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: RGWMIRDPSNCSLCLSAEWHSRS*SNTHCH
Trigger: GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCA...CTCCGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGAGAGAAGCTGGTAACTaGCTGCCGTTGAGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: GLGLELAFIPTARWAEREREAGN*LPLRLN
Trigger: GTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCT...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCGGGGTAGGCATGGCTaGGCTGGCCCACACAGCCTT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELARGRHG*AGPHSL
Trigger: AAGGCTGTGTGGGCCAGCCCAGCCATGCCTACCCCG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTAAGAGCCATGGGCACTaGGCAGCAGGCACCGCACGG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSKSHGH*AAGTAR
Trigger: CCGTGCGGTGCCTGCTGCCCAGTGCCCATGGCTCTT...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCAAGAGCCATGGGCACTaGGCAGCAGGCACCGCACGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAKSHGH*AAGTAR
Trigger: CCGTGCGGTGCCTGCTGCCCAGTGCCCATGGCTCTT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCAAGAGCCATGGGCACTaGGCAGCAGGCACCGCACGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFKSHGH*AAGTAR
Trigger: CCGTGCGGTGCCTGCTGCCCAGTGCCCATGGCTCTT...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCAAGAGCCATGGGCACTaGGCAGCAGGCACCGCACGG +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESKSHGH*AAGTAR
Trigger: CCGTGCGGTGCCTGCTGCCCAGTGCCCATGGCTCTT...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGACCGCCACCATCCGTGTaGGTGCTCCTTCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRPPPSV*VLLPEA
Trigger: GGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGG...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGCCCCTGTCCTGTGCTaGCTGGGTTCCTGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAAPVLC*LGSCSP
Trigger: AGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTGCCCCTGTCCTGTGCTaGCTGGGTTCCTGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLAPVLC*LGSCSP
Trigger: AGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGC...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTGCGGGCGAGAGTGTGTaGGCGCGTCTCTCCCTATGG +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLAGESV*ARLSLW
Trigger: CCATAGGGAGAGACGCGCCCACACACTCTCGCCCGC...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555445.5
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCTCCCGCAGCTGTCCTaGGCGCGGGCGAGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFILPQLS*ARARVC
Trigger: ACACACTCTCGCCCGCGCCCAGGACAGCTGCGGGAG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCTGCGGGAGACGCATTaGGTTAGAGCGGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFILRETH*VRAARG
Trigger: GCCCCGGGCCGCTCTAACCCAATGCGTCTCCCGCAG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS-3UTR TCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGGCGCTCCCGGAAGCTaGCACCCCCTCCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAGAPGS*HPLHRS
Trigger: GGACCTGTGGAGGGGGTGTCAGCTTCCGGGAGCGCC...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGACGAGTCCAGCTCGTaGTCACAGCCGACAACCCGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELADESSS*SQPTTR
Trigger: CCGGGTTGTCGGCTGTGATCACGAGCTGGACTCGTC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGACGAGTCCAGCTCGTaGTCACAGCCGACAACCCGG +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERDESSS*SQPTTR
Trigger: CCGGGTTGTCGGCTGTGATCACGAGCTGGACTCGTC...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTGACGAGTCCAGCTCGTaGTCACAGCCGACAACCCGG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSDESSS*SQPTTR
Trigger: CCGGGTTGTCGGCTGTGATCACGAGCTGGACTCGTC...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGTCTCCGGGCAAGGGTaGAGATTGCAGGAACGCCGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAVSGQG*RLQERR
Trigger: CCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGAC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGTCTCCGGGCAAGGGTaGAGATTGCAGGAACGCCGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFVSGQG*RLQERR
Trigger: CCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGAC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGCAGGTTACAGGCCTaGATGGCAGGGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRCRLQA*MAGGFP
Trigger: TGGGAAGCCCCCTGCCATTCAGGCCTGTAACCTGCA...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGACGCCAACGCCACAACTaGCAGAACACTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRRQRHN*QNTLPR
Trigger: CCTGGGGAGAGTGTTCTGTCAGTTGTGGCGTTGGCG...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGCCAGGCCTGGTCACTaGGGAGGGGGCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIARPGH*GGGSPH
Trigger: ATGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGGC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGCCCAATGGCACAGATaGCCTGTCGCCTCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAAQWHR*PVASEC
Trigger: GCACTCGGAGGCGACAGGTCATCTGTGCCATTGGGC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGTGGTCACCCCTGGCTaGGGGGTGTTCCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSVVTPG*GVFLGC
Trigger: GCAGCCCAGGAACACCCCTCAGCCAGGGGTGACCAC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGGGCAGCCTTGCCACTaGGGCCCGAGAGATGCCGTG +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSGQPCH*GPRDAV
Trigger: CACGGCATCTCTCGGGCCTCAGTGGCAAGGCTGCCC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTTTGTGCAGCCAGCGTaGTGGGGCCCCTCAGCGACA +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLFVQPA*WGPSAT
Trigger: TGTCGCTGAGGGGCCCCATCACGCTGGCTGCACAAA...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTTTGTGCAGCCAGCGTaGTGGGGCCCCTCAGCGACA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFFVQPA*WGPSAT
Trigger: TGTCGCTGAGGGGCCCCATCACGCTGGCTGCACAAA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGAGAAGCCACTGCCCTTaGCCTGGGCATGCCCCCGGT +
Preference number: 4 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWRSHCP*PGHAPG
Trigger: ACCGGGGGCATGCCCAGGTCAAGGGCAGTGGCTTCT...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR TCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCGGGGCAGTGTCGTCTaGGCAGGAGAGCCGCACCAA +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFRGSVV*AGEPHQ
Trigger: TTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCG...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCGGGGCAGTGTCGTCTaGGCAGGAGAGCCGCACCAA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIRGSVV*AGEPHQ
Trigger: TTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTCCTGCAGGGGGTGGATaGTCAGGGATCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPPAGGG*SGIRRT
Trigger: AGTTCGACGGATCCCTGATCATCCACCCCCTGCAGG...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR TCA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGCCTGCAGGGGGTGGATaGTCAGGGATCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQPAGGG*SGIRRT
Trigger: AGTTCGACGGATCCCTGATCATCCACCCCCTGCAGG...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR TCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACGCTGGGTCCCTGGGCTaGGGGAAGCGGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYAGSLG*GKRLSS
Trigger: TGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGC...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGCTCCCCCAGAACTCTaGGCTGGACCCATCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAAPPEL*AGPIAG
Trigger: ACCAGCGATGGGTCCAGCTCAGAGTTCTGGGGGAGC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGGCTCCCCCAGAACTCTaGGCTGGACCCATCGCTGGT +
Preference number: 4 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVAPPEL*AGPIAG
Trigger: ACCAGCGATGGGTCCAGCTCAGAGTTCTGGGGGAGC...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GTAGAAGCCGCCATCTTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGCGTTCCTGGACCACCTaGTGTTCACACTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VEAAIFYSHSANDQGAIRRSWTT*CSHFLL
Trigger: CAGGAGAAAGTGTGAACATCAGGTGGTCCAGGAACG...CCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAAGATGGCGGCTTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGGCGGTGGGTGCTGGTaGGACCACCTTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIGGGCW*DHLHLG
Trigger: ACCGAGGTGAAGGTGGTCTCACCAGCACCCACCGCC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTGAAGGGTGGCGCTGGTaGTCCGGCATCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFEGWRW*SGISTQ
Trigger: CTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTC...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCCCAGGTGTCACTCTaGCGCCTCACCTTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPQVSL*RLTLGA
Trigger: GGCTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCGGGGCAGCTCTCCGTaGGACAAGAGCGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYRGSSP*DKSGGS
Trigger: GGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCACAGACATCCCTCTTaGCAGGCTCGCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFHRHPS*QARRAS
Trigger: GGACGCCCTGCGAGCCTGGCAAGAGGGATGTCTGTG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTGGGTGCCCATGGCCCTaGCTTCCAGCGCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SLILAQNTSLIQQDLACPGCPWP*LPALGL
Trigger: GAGACCAAGCGCTGGAAGGCAGGGCCATGGGCACCC...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTCCCCGTCAGACGAGATaGAGTACACGGAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPPRQTR*STRSGT
Trigger: AGTCCCGCTCCGTGTACTGCATCTCGTCTGACGGGG...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGCCCCGTCAGACGAGATaGAGTACACGGAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQPRQTR*STRSGT
Trigger: AGTCCCGCTCCGTGTACTGCATCTCGTCTGACGGGG...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCACGGCCTCCTGGATaGCGGCCCCGTCAGACGAGA +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSPRPPG*RPRQTR
Trigger: TCTCGTCTGACGGGGCCGGCATCCAGGAGGCCGTGG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCCCAGGTGCCAACATaGCAGGCCTGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPQVPT*QAWSLR
Trigger: CCTCAGTGACCAGGCCTGGCATGTTGGCACCTGGGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCCCAGGTGCCAACATaGCAGGCCTGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPQVPT*QAWSLR
Trigger: CCTCAGTGACCAGGCCTGGCATGTTGGCACCTGGGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAAGCGACACAGGTGTAGAAGCCGCCATCTTCTACAGCCACTCGGCTAATGACAGCATAGACCCCAGGTaGCAACATGCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ESDTGVEAAIFYSHSANDSIDPR*QHARPG
Trigger: ACCAGGCCTGGCATGTTGGCACCTGGGGTCTATGCT...GTCATTAGCCGAGTGGCTGTAGAAGATGGCGGCTTCTACACCTGTGTCGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTGTCGCCTCCGAGTaGCCGAGCTGCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPVASE*PSCSSW
Trigger: CCAAGAGCTGCAGCTCGGGCACTCGGAGGCGACAGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCCTGTCGCCTCCGAGTaGCCGAGCTGCAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNPVASE*PSCSSW
Trigger: CCAAGAGCTGCAGCTCGGGCACTCGGAGGCGACAGG...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCACAGGCTTGGAGTGCTaGAGGCTCCCGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELATGLEC*RLPQWL
Trigger: CAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGTCCACAGGCTTGGAGTaGTGCAGGCTCCCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETSTGLE*CRLPQW
Trigger: CCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGA...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTCCACAGGCTTGGAGTaGTGCAGGCTCCCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFSTGLE*CRLPQW
Trigger: CCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTGGGGTGTTCCTGGGCTaGCCACCACTGGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLILAQNTSLIQQDLACPGVFLG*PPLASG
Trigger: TCCAGAGGCCAGTGGTGGGCAGCCCAGGAACACCCC...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACTGCTGGTATGGGGGCTaGTGCAGAGAGGGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNCWYGG*CREGAG
Trigger: CCCCGCTCCCTCTCTGCAGCAGCCCCCATACCAGCA...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGCCCGACCGCAGGGGTTaGTGGTATGGGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQPDRRG*WYGGCC
Trigger: GCAGCAGCCCCCATACCAGCAACCCCTGCGGTCGGG...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCGACCGCAGGGGTTaGTGGTATGGGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSPDRRG*WYGGCC
Trigger: GCAGCAGCCCCCATACCAGCAACCCCTGCGGTCGGG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCGTGAGGACTGTGTCTaGAGTCGTGGGGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAREDCV*SRGALS
Trigger: GCTCAGGGCCCCACGACTGCAGACACAGTCCTCACG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGGCAGCACCCGTACCTaGTCTGCTGACAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSGSTRT*SADRGP
Trigger: GGGCCCCCTGTCAGCAGAGCAGGTACGGGTGCTGCC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCCTTGACCTGGGCATaGCCCCGGTGCTGTCACCAC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPLTWA*PRCCHH
Trigger: GTGGTGACAGCACCGGGGGCATGCCCAGGTCAAGGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTCACTGGGCTCATTCTaGTGGGCCTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFSLGSF*WAWGWW
Trigger: CCACCAGCCCCAGGCCCAGCAGAATGAGCCCAGTGA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCTCACTGGGCTCATTCTaGTGGGCCTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESSLGSF*WAWGWW
Trigger: CCACCAGCCCCAGGCCCAGCAGAATGAGCCCAGTGA...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTGCCCCAGGGCTGCCTaGACCAACGAGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPCPRAA*TNEGST
Trigger: TGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCA...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTGCCCCAGGGCTGCCTaGACCAACGAGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFICPRAA*TNEGST
Trigger: TGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCCAACTGCCCCAGGGCTaGCTGCACCAACGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPQLPQG*LHQRGL
Trigger: GAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTG...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACGAGAGCCGCACCAACTaGCCCAGGGCTGCCTGCACC +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYESRTN*PRAACT
Trigger: GGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTC...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTCCCGCGTCCTCTGCCTaGAGGGGGTGGATGATCAGG +
Preference number: 4 (lower is better)
Translates to: SLILAQNTSLIQQDLACPPASSA*RGWMIR
Trigger: CCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGG...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCCGCGTCCTCTGCCTaGAGGGGGTGGATGATCAGG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPASSA*RGWMIR
Trigger: CCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCCCGCGTCCTCTGCCTaGAGGGGGTGGATGATCAGG +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFPASSA*RGWMIR
Trigger: CCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGG...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTCCCGCGTCCTCTGCCTaGAGGGGGTGGATGATCAGG +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLPASSA*RGWMIR
Trigger: CCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGG...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTGGTGCCCGCGTCCTCTaGCTGCAGGGGGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLGARVL*LQGVDD
Trigger: ATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACC...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGGTGCCCGCGTCCTCTaGCTGCAGGGGGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIGARVL*LQGVDD
Trigger: ATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGTGCCACAGCTGTAGGTaGCCGCGTCCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: MNYFGLGLELAFIPTARWCHSCR*PRPLPA
Trigger: TGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCA...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCCTGGCCGGGTGCTaGCACAGCTGTAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEGLAGC*HSCRCP
Trigger: CGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCC...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGGCCTGGCCGGGTGCTaGCACAGCTGTAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCGLAGC*HSCRCP
Trigger: CGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCC...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATCGCGGCCTGGCCGGGTaGTGCCACAGCTGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHRGLAG*CHSCRC
Trigger: GCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCG...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGGGCTGCCCATCTCTCTaGCACTCGATGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWGCPSL*HSMAGG
Trigger: GCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCC...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTGGAGAAGAGACAGGCTaGCCATCTCTCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVGEETG*PSLCHS
Trigger: CGAGTGGCAGAGAGATGGGCAGCCTGTCTCTTCTCC...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGCGGTGGCCATCAGCCTaGACAGGTAGCCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETRWPSA*TGSPFL
Trigger: CAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCG...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCGGTGGCCATCAGCCTaGACAGGTAGCCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESRWPSA*TGSPFL
Trigger: CAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCGGTGGCCATCAGCCTaGACAGGTAGCCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELARWPSA*TGSPFL
Trigger: CAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGACGGTGGCCATCAGCCTaGACAGGTAGCCCGTTCCTG +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERRWPSA*TGSPFL
Trigger: CAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCG...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTCCCCTGGTAGGCACTaGACGTGTAGGAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVSPGRH*TCRSPH
Trigger: ATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGA...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACGGTGCTGCGGCTGACTaGCTGGCTCCCCTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYGAAAD*LAPLVG
Trigger: GCCTACCAGGGGAGCCAGGCAGTCAGCCGCAGCACC...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACCTGAGATCGCGCCATTaGCCTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHLRSRH*PPAWAT
Trigger: TGTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAG...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGCTCGCCTGCAGGACTaGTGCCGCCACCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIARLQD*CRHHPC
Trigger: ACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTGCTGGCTGGGTTCCTaGTCGCCTGCAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELACWLGS*SPAGLL
Trigger: CAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTGCTGGCTGGGTTCCTaGTCGCCTGCAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFCWLGS*SPAGLL
Trigger: CAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTCGAACTGCAGCCTGTaGCTGTCAGAGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVSNCSL*LSEEMG
Trigger: GCCCATCTCCTCTGACAGGCACAGGCTGCAGTTCGA...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCAACAGGACAGCCGGGTaGGCCTCGGTGCACCGCAGA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFINRTAG*ASVHRR
Trigger: TCTGCGGTGCACCGAGGCGCACCCGGCTGTCCTGTT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554301.5
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCGATACCGCCGCCCCTaGAACTCCGCTCCGTCGAAC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIRYRRP*NSAPSN
Trigger: GTTCGACGGAGCGGAGTTCCAGGGGCGGCGGTATCG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCGGGGTTGGGCTCCTaGCTGATGAGCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPGLGS*LMSSMT
Trigger: GGTCATCGAGCTCATCAGCCAGGAGCCCAACCCCGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCGGGGTTGGGCTCCTaGCTGATGAGCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPGLGS*LMSSMT
Trigger: GGTCATCGAGCTCATCAGCCAGGAGCCCAACCCCGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCCGGGGTTGGGCTCCTaGCTGATGAGCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLPGLGS*LMSSMT
Trigger: GGTCATCGAGCTCATCAGCCAGGAGCCCAACCCCGG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTCACTCCATGAGCCGTaGCTCCAGCTGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFSLHEP*LQLKPG
Trigger: CCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTGA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATTCACTCCATGAGCCGTaGCTCCAGCTGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNSLHEP*LQLKPG
Trigger: CCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTGA...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGACTGCCTTCCAGCGCTTaGTCTCCGGGCAAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRLPSSA*SPGKGE
Trigger: TTCACCCTTGCCCGGAGACCAAGCGCTGGAAGGCAG...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTACACGGAGCGGGACTaGGAGCCTCCTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFYTERD*EPPPQE
Trigger: CTCCTGTGGAGGAGGCTCCCAGTCCCGCTCCGTGTA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTACACGGAGCGGGACTaGGAGCCTCCTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAYTERD*EPPPQE
Trigger: CTCCTGTGGAGGAGGCTCCCAGTCCCGCTCCGTGTA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACTCCTCCACGGCCTCCTaGATGCCGGCCCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYSSTAS*MPAPSD
Trigger: GTCTGACGGGGCCGGCATCCAGGAGGCCGTGGAGGA...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGCCAACATGCCAGGCCTaGTCACTGAGGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: MNYFGLGLELAFIPTARWPTCQA*SLRRGQ
Trigger: CTGCCCCCTCCTCAGTGACCAGGCCTGGCATGTTGG...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCCAACATGCCAGGCCTaGTCACTGAGGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLPTCQA*SLRRGQ
Trigger: CTGCCCCCTCCTCAGTGACCAGGCCTGGCATGTTGG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGGGCTCCCGCAGTGGCTaGGCGGCCCAATGGCACAGA +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQGSRSG*AAQWHR
Trigger: TCTGTGCCATTGGGCCGCCCAGCCACTGCGGGAGCC...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGTGCAGGCTCCCGCAGTaGCTGGGCGGCCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQCRLPQ*LGGPMA
Trigger: TGCCATTGGGCCGCCCAGCCACTGCGGGAGCCTGCA...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCCACCACTGGCCTCTaGAGTCTGAGGCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPTTGL*SLRQGT
Trigger: AGTCCCCTGCCTCAGACTCCAGAGGCCAGTGGTGGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGCTGAGGGGTGTTCCTaGGCTGCCCACCACTGGCCT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIAEGCS*AAHHWP
Trigger: AGGCCAGTGGTGGGCAGCCCAGGAACACCCCTCAGC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACTGCCTTGGTCGCCCCTaGGGTCACCTCGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNCLGRP*GHLVLP
Trigger: GGGGAGAACGAGGTGACCCCAGGGGCGACCAAGGCA...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCTGTGTCTGCAGTCGTaGGGCCCTGAGCCCGACCGC +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSLCLQS*GPEPDR
Trigger: GCGGTCGGGCTCAGGGCCCCACGACTGCAGACACAG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCG +
Preference number: 4 (lower is better)
Translates to: AEAGVILIATKLGLQDQIFCQAA*DSGAVS
Trigger: CGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAA...GATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFFCQAA*DSGAVS
Trigger: CGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCG +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLFCQAA*DSGAVS
Trigger: CGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAA...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTTCTGCCTGCAGGGGGTaGATGATCAGGGATCCGTCG +
Preference number: 4 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPSACRG*MIRDPS
Trigger: CGACGGATCCCTGATCATCCACCCCCTGCAGGCAGA...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCTGGGAGTCGCGGCCTaGCCGGGTGCTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCLGVAA*PGAATA
Trigger: AGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCGAAGTTGGATCTTCTaGGAGTCGCGGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRSWIF*ESRPGR
Trigger: CCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCGAAGTTGGATCTTCTaGGAGTCGCGGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESRSWIF*ESRPGR
Trigger: CCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTCGAAGTTGGATCTTCTaGGAGTCGCGGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSRSWIF*ESRPGR
Trigger: CCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCG...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCCACCACCCGGGGCTaGTTCTGGTCCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLSTTRG*FWSKRS
Trigger: GCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGA...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCTCCACCACCCGGGGCTaGTTCTGGTCCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESSTTRG*FWSKRS
Trigger: GCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGA...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCTCCGCTGGCCTGGACTaGCATCCACCACCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVSAGLD*HPPPGA
Trigger: AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGA...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTGTCATCCGGATCCGCTaGCCTGGACTGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLVIRIR*PGLAST
Trigger: GGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGAC...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCTGCCACTCGATGGCTaGGGGCGGGAAGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYLPLDG*GREAFG
Trigger: GCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCTCTCTGCCACTCGATaGCTGGGGGCGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLLSATR*LGAGSL
Trigger: AAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCATCTGGGGACTGGTaGACACGGTGGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPSGDW*TRWPSA
Trigger: GGCTGATGGCCACCGTGTCCACCAGTCCCCAGATGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTGAGCAGCGTGCCATCTaGGGACTGGTGGACACGGTG +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLEQRAI*GLVDTV
Trigger: CACCGTGTCCACCAGTCCCCAGATGGCACGCTGCTC...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTGGCCAGCTCTGGCTaGTCGACGCAGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELALASSG*STQSLP
Trigger: TGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGATTGGCCAGCTCTGGCTaGTCGACGCAGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERLASSG*STQSLP
Trigger: TGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAA...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCTTGGCCAGCTCTGGCTaGTCGACGCAGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESLASSG*STQSLP
Trigger: TGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAA...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTTGGCCAGCTCTGGCTaGTCGACGCAGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSLASSG*STQSLP
Trigger: TGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAA...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAGGCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCACAGTTGGCCAGCTCTaGCTGGTCGACGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: EAGNVNSWHSRSWSNTHCTVGQL*LVDAVP
Trigger: AGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGT...GCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGTCATTGCCACAAAGCTaGGCCTGCAGGATCAAATCA +
Preference number: 4 (lower is better)
Translates to: GLGLELAFIPTARWAERESLPQS*ACRIKS
Trigger: TGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGA...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp GGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGATGGCACAGCAGAAGCTaGAGTAATACTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: GLELAFIPTARWAEREAGWHSRS*SNTHCH
Trigger: GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCA...TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTCGGGGTAGGCATGGCTaGGCTGGCCCACACAGCCTT +
Preference number: 4 (lower is better)
Translates to: SLILAQNTSLIQQDLACPRGRHG*AGPHSL
Trigger: AAGGCTGTGTGGGCCAGCCCAGCCATGCCTACCCCG...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCAGAAGCCCCAGGCTaGGGACGACGGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAPEAPG*GRRGPW
Trigger: CCATGGGCCCCGTCGTCCCCAGCCTGGGGCTTCTGG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCGCCACCATCCGTGTaGGTGCTCCTTCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPPPSV*VLLPEA
Trigger: GGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCGCCACCATCCGTGTaGGTGCTCCTTCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPPPSV*VLLPEA
Trigger: GGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCTGTCCTGTGCTGGCTaGGTTCCTGCTCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESLSCAG*VPARLQ
Trigger: CTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTCCTGGCCCAGGCTGTTaGTCTTGCCGCCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSPGPGC*SCRQRP
Trigger: TGGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGG...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCTGGCCCAGGCTGTTaGTCTTGCCGCCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPGPGC*SCRQRP
Trigger: TGGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCCTGGCCCAGGCTGTTaGTCTTGCCGCCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLPGPGC*SCRQRP
Trigger: TGGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGCGCGTCTCTCCCTATaGCCCACAGGTGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAARLSL*PTGDQE
Trigger: CTCCTGGTCACCTGTGGGCCATAGGGAGAGACGCGC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGCGGGCGAGAGTGTGTaGGCGCGTCTCTCCCTATGG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIAGESV*ARLSLW
Trigger: CCATAGGGAGAGACGCGCCCACACACTCTCGCCCGC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS-3UTR TCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTGGCGCTCCCGGAAGCTaGCACCCCCTCCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: SFLCPGITFATRQSSERFGAPGS*HPLHRS
Trigger: GGACCTGTGGAGGGGGTGTCAGCTTCCGGGAGCGCC...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGCTGCAGTCACTCCATaGGCCGTGGCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAAAVTP*AVAPAE
Trigger: TTCAGCTGGAGCCACGGCTCATGGAGTGACTGCAGC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTGTCTCCGGGCAAGGGTaGAGATTGCAGGAACGCCGG +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFVSGQG*RLQERR
Trigger: CCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGAC...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTTCCTCCACAGGAGGCTaGGCAGGGTGCCCATGGCCC +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSSSTGG*AGCPWP
Trigger: GGGCCATGGGCACCCTGCTCAGCCTCCTGTGGAGGA...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTGCAGGTTACAGGCCTaGATGGCAGGGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELACRLQA*MAGGFP
Trigger: TGGGAAGCCCCCTGCCATTCAGGCCTGTAACCTGCA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCGCCAACGCCACAACTaGCAGAACACTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRQRHN*QNTLPR
Trigger: CCTGGGGAGAGTGTTCTGTCAGTTGTGGCGTTGGCG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGCCAGGCCTGGTCACTaGGGAGGGGGCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSARPGH*GGGSPH
Trigger: ATGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGGC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGCCCAATGGCACAGATaGCCTGTCGCCTCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIAQWHR*PVASEC
Trigger: GCACTCGGAGGCGACAGGTCATCTGTGCCATTGGGC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCTGGCCTCTGGAGTCTaGGGCAGGGGACTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYLASGV*GRGLLR
Trigger: CCTCAGGAGTCCCCTGCCTCAGACTCCAGAGGCCAG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTTTTGTGCAGCCAGCGTaGTGGGGCCCCTCAGCGACA +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFFVQPA*WGPSAT
Trigger: TGTCGCTGAGGGGCCCCATCACGCTGGCTGCACAAA...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTAGAAGCCACTGCCCTTaGCCTGGGCATGCCCCCGGT +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSRSHCP*PGHAPG
Trigger: ACCGGGGGCATGCCCAGGTCAAGGGCAGTGGCTTCT...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCTGCAGGGGGTGGATaGTCAGGGATCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPAGGG*SGIRRT
Trigger: AGTTCGACGGATCCCTGATCATCCACCCCCTGCAGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATGCTGGGTCCCTGGGCTaGGGGAAGCGGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHAGSLG*GKRLSS
Trigger: TGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGC...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCGCTCCCCCAGAACTCTaGGCTGGACCCATCGCTGGT +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPAPPEL*AGPIAG
Trigger: ACCAGCGATGGGTCCAGCTCAGAGTTCTGGGGGAGC...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCAGTAGGGGGCAGTCCTaGGATTGTCAGCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFSRGQS*DCQLPQ
Trigger: CTGGGGGAGCTGACAATCTCAGGACTGCCCCCTACT...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTAGTAGGGGGCAGTCCTaGGATTGTCAGCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSSRGQS*DCQLPQ
Trigger: CTGGGGGAGCTGACAATCTCAGGACTGCCCCCTACT...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp AGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCCCCGCAAGTTGTAAATaGGCAGCGTGCCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPMNYFGLGLELAFIPTAPASCK*AACHLG
Trigger: CCCCAGATGGCACGCTGCTCATTTACAACTTGCGGG...GGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR TCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGGGCGGTGGGTGCTGGTaGGACCACCTTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQGGGCW*DHLHLG
Trigger: ACCGAGGTGAAGGTGGTCTCACCAGCACCCACCGCC...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTGTGAGGCTGGAAACGTaGACAGCTGGCACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QMNRHSQICMLASGGLQGVRLET*TAGTAE
Trigger: TTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCAC...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp AGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGACGGAGGTTGCAGTaGGCTGAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: SPMNYFGLGLELAFIPTARRRLQ*AEIAPL
Trigger: CAATGGCGCGATCTCAGCTCACTGCAACCTCCGTCT...GGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGCTGGAGAAGCGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGWRSA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCGCTTCTCCAGCC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTATGGCCCACAGGTaGCCAGGAGACCCGCAACAG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPMAHR*PGDPQQ
Trigger: CTGTTGCGGGTCTCCTGGTCACCTGTGGGCCATAGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTTCGAACTCCGCGCACTaGTCGGCCCGGAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTASNSAH*SARKSR
Trigger: CCGGGACTTCCGGGCCGAGCAGTGCGCGGAGTTCGA...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGCACAGACATCCCTCTTaGCAGGCTCGCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWHRHPS*QARRAS
Trigger: GGACGCCCTGCGAGCCTGGCAAGAGGGATGTCTGTG...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTAGACACTTGTCCTCCTaGTTGGACGAGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVRHLSS*LDESSS
Trigger: CGAGCTGGACTCGTCCAAGCAGGAGGACAAGTGTCT...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATCGGGGTAGCAGGTCGTaGCGTCACCCCCACACCGCA +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHRGSRS*RHPHTA
Trigger: TGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCG...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAAGCGTCAAAGGTGCCTaGGACGGGGTAGCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERSVKGA*DGVAGR
Trigger: ACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCT...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCAGCCAGGAAGTTCCTaGTGGCAGCAGCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFQPGSS*WQQPRR
Trigger: TCGACGAGGCTGCTGCCAGCAGGAACTTCCTGGCTG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000554301.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCGCCACACTCCGCGCTaGAGTCACTCCATGAGCCGT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIRHTPR*SHSMSR
Trigger: ACGGCTCATGGAGTGACTGCAGCGCGGAGTGTGGCG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGAGGCAAGGGTGAAGATTaGAGGAACGCCGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRGKGED*RNAGQL
Trigger: CAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCC...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCCCGTCAGACGAGATaGAGTACACGGAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPRQTR*STRSGT
Trigger: AGTCCCGCTCCGTGTACTGCATCTCGTCTGACGGGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACACAGGCTTGGAGTGCTaGAGGCTCCCGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNTGLEC*RLPQWL
Trigger: CAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGT...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTGTGCACATCCTGCATaGTGGGGACCTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELACAHPA*WGPPGG
Trigger: TCCCCCAGGAGGTCCCCAGCATGCAGGATGTGCACA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCTGTGCACATCCTGCATaGTGGGGACCTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESCAHPA*WGPPGG
Trigger: TCCCCCAGGAGGTCCCCAGCATGCAGGATGTGCACA...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTGTGCACATCCTGCATaGTGGGGACCTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFCAHPA*WGPPGG
Trigger: TCCCCCAGGAGGTCCCCAGCATGCAGGATGTGCACA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTGCTGGCAGGGGTGTaGACATCCTGCATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELALLAGV*TSCMLG
Trigger: CCCCAGCATGCAGGATGTGCACACCCCTGCCAGCAA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATACGGCATCCAGGGGTTaGTGGCAGGGGTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNTASRG*WQGCAH
Trigger: ATGTGCACACCCCTGCCAGCAACCCCTGGATGCCGT...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGGGCTGACAGGTGGGTaGCTTGGTCGCCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAGLTGG*LGRPWG
Trigger: ACCCCAGGGGCGACCAAGGCACCCACCTGTCAGCCC...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGGCTGACAGGTGGGTaGCTTGGTCGCCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEGLTGG*LGRPWG
Trigger: ACCCCAGGGGCGACCAAGGCACCCACCTGTCAGCCC...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTTGGTATGGGGGCTGCTaGAGAGAGGGAGCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCWYGGC*REGAGP
Trigger: GGGCCCCGCTCCCTCTCTGCAGCAGCCCCCATACCA...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCGTGAGGACTGTGTCTaGAGTCGTGGGGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFREDCV*SRGALS
Trigger: GCTCAGGGCCCCACGACTGCAGACACAGTCCTCACG...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCTGAGGCCCGAGAGATaGCGTGTGGCCATCGGGGCA +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYLRPER*RVAIGA
Trigger: TGCCCCGATGGCCACACGGCATCTCTCGGGCCTCAG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCGGCAGCACCCGTACCTaGTCTGCTGACAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCGSTRT*SADRGP
Trigger: GGGCCCCCTGTCAGCAGAGCAGGTACGGGTGCTGCC...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACCACCATACGACTTTGTaGAGCCAGCGTGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHHHTTL*SQRDGA
Trigger: GGCCCCATCACGCTGGCTGCACAAAGTCGTATGGTG...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGTCACTGGGCTCATTCTaGTGGGCCTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWSLGSF*WAWGWW
Trigger: CCACCAGCCCCAGGCCCAGCAGAATGAGCCCAGTGA...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp CCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCCAACTGCCCCAGGGCTaGCTGCACCAACGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: PFPASVLVIKVTFQSFGPQLPQG*LHQRGL
Trigger: GAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTG...GGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETGWPSF*QAAWDS
Trigger: GGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCC...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFGWPSF*QAAWDS
Trigger: GGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERGWPSF*QAAWDS
Trigger: GGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCC...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESGWPSF*QAAWDS
Trigger: GGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCC...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGGGTGCCCGCGTCCTCTaGCTGCAGGGGGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQGARVL*LQGVDD
Trigger: ATCATCCACCCCCTGCAGGCAGAGGACGCGGGCACC...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTGCCACAGCTGTAGGTaGCCGCGTCCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFICHSCR*PRPLPA
Trigger: TGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGGGCCTGGCCGGGTGCTaGCACAGCTGTAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLGLAGC*HSCRCP
Trigger: CGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCC...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGGCTGCCCATCTCTCTaGCACTCGATGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSGCPSL*HSMAGG
Trigger: GCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCGGCTGCCCATCTCTCTaGCACTCGATGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVGCPSL*HSMAGG
Trigger: GCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCC...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGACGCTGGTCTCGGTCCTaGCCATTGAAAGCGACACAG +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRRWSRS*PLKATQ
Trigger: CTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCG...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGGGTCGACGCAGTCCCTaGCAGGGTCCCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLGRRSP*QGPWAG
Trigger: CCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACC...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCGGTCGACGCAGTCCCTaGCAGGGTCCCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSIGRRSP*QGPWAG
Trigger: CCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACC...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATCTGAGATCGCGCCATTaGCCTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNLRSRH*PPAWAT
Trigger: TGTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAG...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGCCAGGAGACGGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETPGDGG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCCGTCTCCTGG...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACCAAAGTTATTGGCATTaGCATGGCAGCCGCCATACC +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNQSYWH*HGSRHT
Trigger: GGTATGGCGGCTGCCATGGCAATGCCAATAACTTTG...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGCTCGCCTGCAGGACTaGTGCCGCCACCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSARLQD*CRHHPC
Trigger: ACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTGGGTTCCTGCTCGCCTaGAGGACTGCTGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSGFLLA*RTAAAT
Trigger: GGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCC...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCGGGTTCCTGCTCGCCTaGAGGACTGCTGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCGFLLA*RTAAAT
Trigger: GGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCC...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCTGGACCCAAGCTCCTaGCCCCATGGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFLDPSS*PHGHSP
Trigger: TGGAGAATGGCCATGGGGGCAGGAGCTTGGGTCCAG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCTGGACCCAAGCTCCTaGCCCCATGGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESLDPSS*PHGHSP
Trigger: TGGAGAATGGCCATGGGGGCAGGAGCTTGGGTCCAG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCTGGACCCAAGCTCCTaGCCCCATGGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELALDPSS*PHGHSP
Trigger: TGGAGAATGGCCATGGGGGCAGGAGCTTGGGTCCAG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCAAGGGATCCGTCGAACTaGAGCCTGTGCCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSRDPSN*SLCLSE
Trigger: CTCTGACAGGCACAGGCTGCAGTTCGACGGATCCCT...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCGATACCGCCGCCCCTaGAACTCCGCTCCGTCGAAC +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYRYRRP*NSAPSN
Trigger: GTTCGACGGAGCGGAGTTCCAGGGGCGGCGGTATCG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGCTCGTAATGCAGGATaGTGCTGGCTGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAARNAG*CWLLAG
Trigger: CCCTGCCAGCAGCCAGCACCATCCTGCATTACGAGC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCAGGCCTCATGGTCGATaGTGCAGAACACCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRPHGR*CRTPGG
Trigger: CCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCT...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAAGGCCTCATGGTCGATaGTGCAGAACACCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERRPHGR*CRTPGG
Trigger: CCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCT...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTTCAGCTGGCCGTGGCTaGCGCTGGCACATGTGGTCG +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSSAGRG*RWHMWS
Trigger: CGACCACATGTGCCAGCGCCAGCCACGGCCAGCTGA...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCTGCCTTCCAGCGCTTaGTCTCCGGGCAAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFLPSSA*SPGKGE
Trigger: TTCACCCTTGCCCGGAGACCAAGCGCTGGAAGGCAG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTTACACGGAGCGGGACTaGGAGCCTCCTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFYTERD*EPPPQE
Trigger: CTCCTGTGGAGGAGGCTCCCAGTCCCGCTCCGTGTA...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCTCCACGGCCTCCTaGATGCCGGCCCCGTCAGAC +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCSSTAS*MPAPSD
Trigger: GTCTGACGGGGCCGGCATCCAGGAGGCCGTGGAGGA...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGGGTTACAGGCCTGAATaGCAGGGGGCTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVGYRPE*QGASQA
Trigger: TGCCTGGGAAGCCCCCTGCCATTCAGGCCTGTAACC...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGTTACAGGCCTGAATaGCAGGGGGCTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGYRPE*QGASQA
Trigger: TGCCTGGGAAGCCCCCTGCCATTCAGGCCTGTAACC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTGGTTACAGGCCTGAATaGCAGGGGGCTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLGYRPE*QGASQA
Trigger: TGCCTGGGAAGCCCCCTGCCATTCAGGCCTGTAACC...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGGCTCAGTCAGAGGTaGCCGGTCTTCCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGLSQR*PVFQGA
Trigger: TGCTCCTTGGAAGACCGGCCACCTCTGACTGAGCCC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGGGCTCAGTCAGAGGTaGCCGGTCTTCCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFGLSQR*PVFQGA
Trigger: TGCTCCTTGGAAGACCGGCCACCTCTGACTGAGCCC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTCCAACATGCCAGGCCTaGTCACTGAGGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLILAQNTSLIQQDLACPPTCQA*SLRRGQ
Trigger: CTGCCCCCTCCTCAGTGACCAGGCCTGGCATGTTGG...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCAACATGCCAGGCCTaGTCACTGAGGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPTCQA*SLRRGQ
Trigger: CTGCCCCCTCCTCAGTGACCAGGCCTGGCATGTTGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCGAGCTGCAGCTCTTaGAGCATAGACCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPSCSS*SIDPRC
Trigger: GCACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCGAGCTGCAGCTCTTaGAGCATAGACCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPSCSS*SIDPRC
Trigger: GCACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGCACATCCTGCATGCTaGGGACCTCCTGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFAHPAC*GPPGGD
Trigger: ATCTCCCCCAGGAGGTCCCCAGCATGCAGGATGTGC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGCACATCCTGCATGCTaGGGACCTCCTGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAAHPAC*GPPGGD
Trigger: ATCTCCCCCAGGAGGTCCCCAGCATGCAGGATGTGC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCCCTGTGGTCACCCCTaGCTGAGGGGTGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYPCGHP*LRGVPG
Trigger: CCCAGGAACACCCCTCAGCCAGGGGTGACCACAGGG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGACAGGTGGGTGCCTTaGTCGCCCCTGGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSDRWVP*SPLGSP
Trigger: AGGTGACCCCAGGGGCGACCAAGGCACCCACCTGTC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCGACAGGTGGGTGCCTTaGTCGCCCCTGGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVDRWVP*SPLGSP
Trigger: AGGTGACCCCAGGGGCGACCAAGGCACCCACCTGTC...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCCAGGGCTGACAGGTaGGTGCCTTGGTCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAPRADR*VPWSPL
Trigger: CAGGGGCGACCAAGGCACCCACCTGTCAGCCCTGGG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCCAGGGCTGACAGGTaGGTGCCTTGGTCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPRADR*VPWSPL
Trigger: CAGGGGCGACCAAGGCACCCACCTGTCAGCCCTGGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAACCCAGGGCTGACAGGTaGGTGCCTTGGTCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEPRADR*VPWSPL
Trigger: CAGGGGCGACCAAGGCACCCACCTGTCAGCCCTGGG...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCGAGAGATGCCGTGTaGCCATCGGGGCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAPRDAV*PSGQHP
Trigger: CGGGTGCTGCCCCGATGGCCACACGGCATCTCTCGG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCGAGAGATGCCGTGTaGCCATCGGGGCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPRDAV*PSGQHP
Trigger: CGGGTGCTGCCCCGATGGCCACACGGCATCTCTCGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCCACTGCCCTTGACCTaGGCATGCCCCCGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYPLPLT*ACPRCC
Trigger: ACAGCACCGGGGGCATGCCCAGGTCAAGGGCAGTGG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACAGCCCCGGCACTCACTaGGCTCATTCTGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNSPGTH*AHSAGP
Trigger: AGGCCCAGCAGAATGAGCCCAGTGAGTGCCGGGGCT...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCAGCCCCGGCACTCACTaGGCTCATTCTGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFISPGTH*AHSAGP
Trigger: AGGCCCAGCAGAATGAGCCCAGTGAGTGCCGGGGCT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCAGAGGACCGGCTGCAGTaGCCACGTTGTCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSEDRLQ*PRCHSN
Trigger: GTTGCTATGACAACGTGGCCACTGCAGCCGGTCCTC...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTGAGGACCGGCTGCAGTaGCCACGTTGTCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPEDRLQ*PRCHSN
Trigger: GTTGCTATGACAACGTGGCCACTGCAGCCGGTCCTC...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCG +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPFCQAA*DSGAVS
Trigger: CGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAA...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTTCAGAGGAGATGGGCTaGCCATCTTTCTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCSEEMG*PSFCQA
Trigger: TGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGA...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCACACTTTCTCCTGCTACCACACACAATAGCCTGGCCGTATCACCCTCTGGCACCTGTCAGAGGAGATaGGCTGGCCATCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FTLSPATTHNSLAVSPSGTCQRR*AGHLSA
Trigger: GGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGT...GCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGGTAGCAGGAGAAAGTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCTGCCTGCAGGGGGTaGATGATCAGGGATCCGTCG +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLSACRG*MIRDPS
Trigger: CGACGGATCCCTGATCATCCACCCCCTGCAGGCAGA...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTTCTGCCTGCAGGGGGTaGATGATCAGGGATCCGTCG +
Preference number: 4 (lower is better)
Translates to: PSPMNYFGLGLELAFIPTSACRG*MIRDPS
Trigger: CGACGGATCCCTGATCATCCACCCCCTGCAGGCAGA...AGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCGAAGTTGGATCTTCTaGGAGTCGCGGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIRSWIF*ESRPGR
Trigger: CCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTCCTATGATGCGAAGTTaGATCTTCTGGGAGTCGCGG +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRAPMMRS*IFWESR
Trigger: CCGCGACTCCCAGAAGATCCAACTTCGCATCATAGG...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGACCCGGGGCTGGTTCTaGTCCAAACGCAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: VNSWHSRSWSNTHCHKAGTRGWF*SKRSLF
Trigger: AAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGT...CCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTCCACCACCCGGGGCTaGTTCTGGTCCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFISTTRG*FWSKRS
Trigger: GCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTTCCACCACCCGGGGCTaGTTCTGGTCCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFSTTRG*FWSKRS
Trigger: GCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGA...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCGGATCCGCTGGCCTaGACTGGCATCCACCACCCG +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPDPLA*TGIHHP
Trigger: CGGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCGTCATCCGGATCCGCTaGCCTGGACTGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPVIRIR*PGLAST
Trigger: GGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGAC...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGTCATCCGGATCCGCTaGCCTGGACTGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIVIRIR*PGLAST
Trigger: GGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGAC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCTCTCTGCCACTCGATaGCTGGGGGCGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFILSATR*LGAGSL
Trigger: AAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGCTCTCTGCCACTCGATaGCTGGGGGCGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWLSATR*LGAGSL
Trigger: AAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTCTCTCTGCCACTCGATaGCTGGGGGCGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SLILAQNTSLIQQDLACPLSATR*LGAGSL
Trigger: AAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGCTGCAGCTGGTGTCTaGGAGAAGAGACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFAAAGV*EKRQAA
Trigger: GGCAGCCTGTCTCTTCTCCCAGACACCAGCTGCAGC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCAGCTGGACCCATCGCTaGTCTCGGTCCTGCCCATTG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELASWTHR*SRSCPL
Trigger: CAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTGGCCGTATCACCCTCTaGCACTGTCACAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSGRITL*HCHSRG
Trigger: CCCCCTACTGTGACAGTGCCAGAGGGTGATACGGCC...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGCCACACACAATAGCCTaGCCGTATCACCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRPHTIA*PYHPLA
Trigger: TGCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGG...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGACTGGTGGACACGGTaGCCATCAGCCTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFDWWTR*PSACTG
Trigger: ACCTGTGCAGGCTGATGGCCACCGTGTCCACCAGTC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGACTGGTGGACACGGTaGCCATCAGCCTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETDWWTR*PSACTG
Trigger: ACCTGTGCAGGCTGATGGCCACCGTGTCCACCAGTC...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCATCTGGGGACTGGTaGACACGGTGGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPSGDW*TRWPSA
Trigger: GGCTGATGGCCACCGTGTCCACCAGTCCCCAGATGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGCCATCTGGGGACTGGTaGACACGGTGGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWPSGDW*TRWPSA
Trigger: GGCTGATGGCCACCGTGTCCACCAGTCCCCAGATGG...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGAGCAGCGTGCCATCTaGGGACTGGTGGACACGGTG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIEQRAI*GLVDTV
Trigger: CACCGTGTCCACCAGTCCCCAGATGGCACGCTGCTC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCCTGGGCTGGGCGGTaGGTGCTGGTGAGACCACCT +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAPWAGR*VLVRPP
Trigger: AGGTGGTCTCACCAGCACCCACCGCCCAGCCCAGGG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCCTGGGCTGGGCGGTaGGTGCTGGTGAGACCACCT +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPWAGR*VLVRPP
Trigger: AGGTGGTCTCACCAGCACCCACCGCCCAGCCCAGGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACTTGGCCAGCTCTGGCTaGTCGACGCAGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNLASSG*STQSLP
Trigger: TGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAA...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCACAGTTGGCCAGCTCTaGCTGGTCGACGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFTVGQL*LVDAVP
Trigger: AGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGT...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCGAAAACAGCAGCCTGTaGTTATGTCAGAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: CLQGVDDQGSVELQPVPVENSSL*LCQRCK
Trigger: TTTGCATCTCTGACATAACCACAGGCTGCTGTTTTC...GACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCCGAGGCAAAGTTATTaGCATTGCCATGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCPRQSY*HCHGSR
Trigger: GCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGG...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCGCCACCATCCGTGTaGGTGCTCCTTCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPPPSV*VLLPEA
Trigger: GGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCCGCCACCATCCGTGTaGGTGCTCCTTCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNPPPSV*VLLPEA
Trigger: GGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGG...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCTGTCCTGTGCTGGCTaGGTTCCTGCTCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFILSCAG*VPARLQ
Trigger: CTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCTGTCCTGTGCTGGCTaGGTTCCTGCTCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFLSCAG*VPARLQ
Trigger: CTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAG...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGGCCCCTGTCCTGTGCTaGCTGGGTTCCTGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQAPVLC*LGSCSP
Trigger: AGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGC...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGCCCCTGTCCTGTGCTaGCTGGGTTCCTGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSAPVLC*LGSCSP
Trigger: AGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAGCTCCTGCCCCCATaGCCATTCTCCAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHKLLPP*PFSKGL
Trigger: CAGGCCTTTGGAGAATGGCCATGGGGGCAGGAGCTT...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCCCAGTCCAGGGGCCCTaGACCCAAGCTCCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSIPVQGP*TQAPAP
Trigger: GGGGGCAGGAGCTTGGGTCCAGGGCCCCTGGACTGG...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTGCCAGATTTGCATGTTaGCCTCAGGAGGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRAARFAC*PQEGFK
Trigger: CTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGC...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGTAGAAGCCGCCATCTTCCTGTACAGAGCAGGCTaGTCAGCTTTACACAGGTGT +
Preference number: 4 (lower is better)
Translates to: LVSVLPIESDTGVEAAIFLYRAG*SALHRC
Trigger: ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAG...GAAGATGGCGGCTTCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGCGCGTCTCTCCCTATaGCCCACAGGTGACCAGGAG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIARLSL*PTGDQE
Trigger: CTCCTGGTCACCTGTGGGCCATAGGGAGAGACGCGC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCAGTCATGGCTGGGCTaGCCCACACAGCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIQSWLG*PTQPSP
Trigger: TGGGGAAGGCTGTGTGGGCCAGCCCAGCCATGACTG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555445.5
CDS-3UTR CCA 90 bp CGTGTAGGAGCCCTCATCCCTGGCCCGCAAGTTGTAAATGAGCAGCGTGCCATCCTAATCCTGGAGAGGTaGGAAGTGAGATCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RVGALIPGPQVVNEQRAILILER*EVRSVG
Trigger: TCCTACAGATCTCACTTCCCACCTCTCCAGGATTAG...GATGGCACGCTGCTCATTTACAACTTGCGGGCCAGGGATGAGGGCTCCTACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCGCCAACGCCACAACTaGCAGAACACTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIRQRHN*QNTLPR
Trigger: CCTGGGGAGAGTGTTCTGTCAGTTGTGGCGTTGGCG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATGCCAGGCCTGGTCACTaGGGAGGGGGCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHARPGH*GGGSPH
Trigger: ATGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGGC...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGCCAGGCCTGGTCACTaGGGAGGGGGCAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAARPGH*GGGSPH
Trigger: ATGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGGC...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGGCCCAATGGCACAGATaGCCTGTCGCCTCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQAQWHR*PVASEC
Trigger: GCACTCGGAGGCGACAGGTCATCTGTGCCATTGGGC...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCACCTCCTGGGGGAGATaGCAGGGCTGCGTGTTACAA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELATSWGR*QGCVLQ
Trigger: TTGTAACACGCAGCCCTGTCATCTCCCCCAGGAGGT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTCTGGCCTCTGGAGTCTaGGGCAGGGGACTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCLASGV*GRGLLR
Trigger: CCTCAGGAGTCCCCTGCCTCAGACTCCAGAGGCCAG...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCGCAGTCGTGGGGCCCTaGGCCCGACCGCAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCAVVGP*ARPQGL
Trigger: CAACCCCTGCGGTCGGGCTCAGGGCCCCACGACTGC...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTAGAAGCCACTGCCCTTaGCCTGGGCATGCCCCCGGT +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTARSHCP*PGHAPG
Trigger: ACCGGGGGCATGCCCAGGTCAAGGGCAGTGGCTTCT...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTGCAGGGGGTGGATaGTCAGGGATCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPAGGG*SGIRRT
Trigger: AGTTCGACGGATCCCTGATCATCCACCCCCTGCAGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGACTCGGTCCTGCCCATTaGAAGCGACACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRLGPAH*KRHRCR
Trigger: TCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAG...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCCGCAAGTTGTAAATaGGCAGCGTGCCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPASCK*AACHLG
Trigger: CCCCAGATGGCACGCTGCTCATTTACAACTTGCGGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGGCGGTGGGTGCTGGTaGGACCACCTTCACCTCGGT +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAGGGCW*DHLHLG
Trigger: ACCGAGGTGAAGGTGGTCTCACCAGCACCCACCGCC...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGAGTGAGGCTGGAAACGTaGACAGCTGGCACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRVRLET*TAGTAE
Trigger: TTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCAC...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTTCTCCCTAGCCCTATaGACTATTTTGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRAFSLAL*TILDWG
Trigger: GCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAA...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGAGACGGAGGTTGCAGTaGGCTGAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: MNYFGLGLELAFIPTARWRRRLQ*AEIAPL
Trigger: CAATGGCGCGATCTCAGCTCACTGCAACCTCCGTCT...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR TCA 90 bp AGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCAGCTACTCAGAAGGCTaGCACAGGAGAATCAAGAAC +
Preference number: 4 (lower is better)
Translates to: SSASDSTAMSPPMMRSWISYSEG*HRRIKN
Trigger: GTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCT...GATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR TCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGAAGGGTGGCGCTGGTaGTCCGGCATCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEEGWRW*SGISTQ
Trigger: CTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTC...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGAAGGGTGGCGCTGGTaGTCCGGCATCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCEGWRW*SGISTQ
Trigger: CTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTC...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCTTCAGCTTTAAAACACATTaGTGGGCTGGGCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: SASDSTAMSPPMMRSWIFSFKTH*WAGHSG
Trigger: GCCACTGTGCCCAGCCCATCAATGTGTTTTAAAGCT...GAAGATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR TCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCTATGGCCCACAGGTaGCCAGGAGACCCGCAACAG +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSPMAHR*PGDPQQ
Trigger: CTGTTGCGGGTCTCCTGGTCACCTGTGGGCCATAGG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555445.5
CDS-3UTR GCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTCGGGGCAGCTCTCCGTaGGACAAGAGCGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SFLCPGITFATRQSSERFRGSSP*DKSGGS
Trigger: GGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCG...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCACAGACATCCCTCTTaGCAGGCTCGCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSHRHPS*QARRAS
Trigger: GGACGCCCTGCGAGCCTGGCAAGAGGGATGTCTGTG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCAGCGTCAAAGGTGCCTaGGACGGGGTAGCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFISVKGA*DGVAGR
Trigger: ACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCTCATGGTCGATGGTaGAGAACACCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPHGRW*RTPGGT
Trigger: AGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCCTCATGGTCGATGGTaGAGAACACCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLPHGRW*RTPGGT
Trigger: AGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGGCAAGGGTGAAGATTaGAGGAACGCCGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFGKGED*RNAGQL
Trigger: CAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCAGCATAGACCCCAGGTaGCAACATGCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFSIDPR*QHARPG
Trigger: ACCAGGCCTGGCATGTTGGCACCTGGGGTCTATGCT...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGATCCGAGTGCCCGAGCTaGAGCTCTTGGAGCATAGAC +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERSECPS*SSWSID
Trigger: GTCTATGCTCCAAGAGCTGCAGCTCGGGCACTCGGA...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACTCCACAGGCTTGGAGTaGTGCAGGCTCCCGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYSTGLE*CRLPQW
Trigger: CCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGA...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTTGTGCACATCCTGCATaGTGGGGACCTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLCAHPA*WGPPGG
Trigger: TCCCCCAGGAGGTCCCCAGCATGCAGGATGTGCACA...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACTGTGCACATCCTGCATaGTGGGGACCTCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNCAHPA*WGPPGG
Trigger: TCCCCCAGGAGGTCCCCAGCATGCAGGATGTGCACA...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCACGGCATCCAGGGGTTaGTGGCAGGGGTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFITASRG*WQGCAH
Trigger: ATGTGCACACCCCTGCCAGCAACCCCTGGATGCCGT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGGGTGTTCCTGGGCTaGCCACCACTGGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEGVFLG*PPLASG
Trigger: TCCAGAGGCCAGTGGTGGGCAGCCCAGGAACACCCC...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACAGGCAGCACCCGTACCTaGTCTGCTGACAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTGSTRT*SADRGP
Trigger: GGGCCCCCTGTCAGCAGAGCAGGTACGGGTGCTGCC...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCACCATACGACTTTGTaGAGCCAGCGTGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFHHTTL*SQRDGA
Trigger: GGCCCCATCACGCTGGCTGCACAAAGTCGTATGGTG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTGGGCATGCCCCCGGTaGTGTCACCACCATACGACT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIWACPR*CHHHTT
Trigger: AGTCGTATGGTGGTGACAGCACCGGGGGCATGCCCA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCCAAGAGGACCGGCTaGAGTGGCCACGTTGTCATA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPKRTG*SGHVVI
Trigger: TATGACAACGTGGCCACTGCAGCCGGTCCTCTTGGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCCAAGAGGACCGGCTaGAGTGGCCACGTTGTCATA +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPKRTG*SGHVVI
Trigger: TATGACAACGTGGCCACTGCAGCCGGTCCTCTTGGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCCAAGAGGACCGGCTaGAGTGGCCACGTTGTCATA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPKRTG*SGHVVI
Trigger: TATGACAACGTGGCCACTGCAGCCGGTCCTCTTGGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAATGCCCCAGGGCTGCCTaGACCAACGAGGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAECPRAA*TNEGST
Trigger: TGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCA...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCAACTGCCCCAGGGCTaGCTGCACCAACGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAQLPQG*LHQRGL
Trigger: GAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCCCGCGTCCTCTGCCTaGAGGGGGTGGATGATCAGG +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSPASSA*RGWMIR
Trigger: CCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGG...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGTGCCACAGCTGTAGGTaGCCGCGTCCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQCHSCR*PRPLPA
Trigger: TGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCA...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGGAGAAGAGACAGGCTaGCCATCTCTCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETGEETG*PSLCHS
Trigger: CGAGTGGCAGAGAGATGGGCAGCCTGTCTCTTCTCC...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGAGAAGAGACAGGCTaGCCATCTCTCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGEETG*PSLCHS
Trigger: CGAGTGGCAGAGAGATGGGCAGCCTGTCTCTTCTCC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGGAGAAGAGACAGGCTaGCCATCTCTCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFGEETG*PSLCHS
Trigger: CGAGTGGCAGAGAGATGGGCAGCCTGTCTCTTCTCC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAAGGGAGCCATCAGGCTaGAGCTGGTGTCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERREPSG*SWCLGE
Trigger: TTCTCCCAGACACCAGCTGCAGCCTGATGGCTCCCT...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCAGGGAGCCATCAGGCTaGAGCTGGTGTCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFREPSG*SWCLGE
Trigger: TTCTCCCAGACACCAGCTGCAGCCTGATGGCTCCCT...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCAGGGAGCCATCAGGCTaGAGCTGGTGTCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAREPSG*SWCLGE
Trigger: TTCTCCCAGACACCAGCTGCAGCCTGATGGCTCCCT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTCGCTGGTCTCGGTCCTaGCCATTGAAAGCGACACAG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSRWSRS*PLKATQ
Trigger: CTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCG...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCGCTGGTCTCGGTCCTaGCCATTGAAAGCGACACAG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRWSRS*PLKATQ
Trigger: CTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCGCTGGTCTCGGTCCTaGCCATTGAAAGCGACACAG +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLRWSRS*PLKATQ
Trigger: CTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTCCCCTGGTAGGCACTaGACGTGTAGGAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELASPGRH*TCRSPH
Trigger: ATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCCCTGGTAGGCACTaGACGTGTAGGAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSSPGRH*TCRSPH
Trigger: ATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGA...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACAGGTGCTGCGGCTGACTaGCTGGCTCCCCTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTGAAAD*LAPLVG
Trigger: GCCTACCAGGGGAGCCAGGCAGTCAGCCGCAGCACC...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCCCAGGAGACGGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPPGDGG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCCGTCTCCTGG...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGCCAGGAGACGGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: YELFWTGAGTSLHPYCQMPGDGG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCCGTCTCCTGG...CATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCCAAAGTTATTGGCATTaGCATGGCAGCCGCCATACC +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSQSYWH*HGSRHT
Trigger: GGTATGGCGGCTGCCATGGCAATGCCAATAACTTTG...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGCTCGCCTGCAGGACTaGTGCCGCCACCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEARLQD*CRHHPC
Trigger: ACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGC...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGCTCGCCTGCAGGACTaGTGCCGCCACCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAARLQD*CRHHPC
Trigger: ACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGC...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGGGGTTCCTGCTCGCCTaGAGGACTGCTGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLGFLLA*RTAAAT
Trigger: GGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCC...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGTGCTGGCTGGGTTCCTaGTCGCCTGCAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQCWLGS*SPAGLL
Trigger: CAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCA...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCAGGCTGTTGGTCTTaGCGCCAGAGACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPGCWS*RQRPPE
Trigger: TTCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACCGAGGGCTCCACACCTaGCAAGCTAATCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHRGLHT*QANPVG
Trigger: TCCTACAGGATTAGCTTGGCAGGTGTGGAGCCCTCG...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000559759.1
CDS-3UTR GCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGTCGAACTGCAGCCTGTaGCTGTCAGAGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETSNCSL*LSEEMG
Trigger: GCCCATCTCCTCTGACAGGCACAGGCTGCAGTTCGA...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTCGAACTGCAGCCTGTaGCTGTCAGAGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFSNCSL*LSEEMG
Trigger: GCCCATCTCCTCTGACAGGCACAGGCTGCAGTTCGA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTCGAACTGCAGCCTGTaGCTGTCAGAGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELASNCSL*LSEEMG
Trigger: GCCCATCTCCTCTGACAGGCACAGGCTGCAGTTCGA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCAGGGATCCGTCGAACTaGAGCCTGTGCCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELARDPSN*SLCLSE
Trigger: CTCTGACAGGCACAGGCTGCAGTTCGACGGATCCCT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCAGGGATCCGTCGAACTaGAGCCTGTGCCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRDPSN*SLCLSE
Trigger: CTCTGACAGGCACAGGCTGCAGTTCGACGGATCCCT...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTAGGGATCCGTCGAACTaGAGCCTGTGCCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSRDPSN*SLCLSE
Trigger: CTCTGACAGGCACAGGCTGCAGTTCGACGGATCCCT...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAGGGATCCGTCGAACTaGAGCCTGTGCCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNRDPSN*SLCLSE
Trigger: CTCTGACAGGCACAGGCTGCAGTTCGACGGATCCCT...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCGAGGGCTCCACACCTaGCAAGCTAATCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLRGLHT*QANPGE
Trigger: CTCTCCAGGATTAGCTTGGCAGGTGTGGAGCCCTCG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAACGGGGCCCACGCAGCTaGAGCCTCCATCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAERGPRS*SLHLSS
Trigger: AGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCCG...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCGGGGCCCACGCAGCTaGAGCCTCCATCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCRGPRS*SLHLSS
Trigger: AGAGGAGAGATGGAGGCTCCAGCTGCGTGGGCCCCG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACGCTCGTAATGCAGGATaGTGCTGGCTGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNARNAG*CWLLAG
Trigger: CCCTGCCAGCAGCCAGCACCATCCTGCATTACGAGC...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGTCACTCCATGAGCCGTaGCTCCAGCTGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQSLHEP*LQLKPG
Trigger: CCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTGA...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTAGGCCTCATGGTCGATaGTGCAGAACACCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SLILAQNTSLIQQDLACPRPHGR*CRTPGG
Trigger: CCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCT...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCTGCCTTCCAGCGCTTaGTCTCCGGGCAAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFILPSSA*SPGKGE
Trigger: TTCACCCTTGCCCGGAGACCAAGCGCTGGAAGGCAG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACTACACGGAGCGGGACTaGGAGCCTCCTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYYTERD*EPPPQE
Trigger: CTCCTGTGGAGGAGGCTCCCAGTCCCGCTCCGTGTA...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTGGGCTCAGTCAGAGGTaGCCGGTCTTCCAAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFGLSQR*PVFQGA
Trigger: TGCTCCTTGGAAGACCGGCCACCTCTGACTGAGCCC...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCCAACATGCCAGGCCTaGTCACTGAGGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYPTCQA*SLRRGQ
Trigger: CTGCCCCCTCCTCAGTGACCAGGCCTGGCATGTTGG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCGAGCTGCAGCTCTTaGAGCATAGACCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPSCSS*SIDPRC
Trigger: GCACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGTGCAGGCTCCCGCAGTaGCTGGGCGGCCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLCRLPQ*LGGPMA
Trigger: TGCCATTGGGCCGCCCAGCCACTGCGGGAGCCTGCA...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGCATCCAGGGGTTGCTaGCAGGGGTGTGCACATCCT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIASRGC*QGCAHP
Trigger: AGGATGTGCACACCCCTGCCAGCAACCCCTGGATGC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCCCACCACTGGCCTCTaGAGTCTGAGGCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYPTTGL*SLRQGT
Trigger: AGTCCCCTGCCTCAGACTCCAGAGGCCAGTGGTGGG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTTGCCTTGGTCGCCCCTaGGGTCACCTCGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTACLGRP*GHLVLP
Trigger: GGGGAGAACGAGGTGACCCCAGGGGCGACCAAGGCA...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTCCCAGGGCTGACAGGTaGGTGCCTTGGTCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCPRADR*VPWSPL
Trigger: CAGGGGCGACCAAGGCACCCACCTGTCAGCCCTGGG...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCCTGTGTCTGCAGTCGTaGGGCCCTGAGCCCGACCGC +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSILCLQS*GPEPDR
Trigger: GCGGTCGGGCTCAGGGCCCCACGACTGCAGACACAG...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGAATCCATGGCTGGGCTaGCCCACACAGCCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: YELFWTGAGTSLHPYCQMNPWLG*PTQPSP
Trigger: TGGGGAAGGCTGTGTGGGCCAGCCCAGCCATGGATT...CATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTGCCTGTCAGCGGAGGTaGAGGGAGCTGTCACGTGAA +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFACQRR*RELSRE
Trigger: TTCACGTGACAGCTCCCTCCACCTCCGCTGACAGGC...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTCTGCCTGCAGGGGGTaGATGATCAGGGATCCGTCG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFISACRG*MIRDPS
Trigger: CGACGGATCCCTGATCATCCACCCCCTGCAGGCAGA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCCGAAGTTGGATCTTCTaGGAGTCGCGGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: PFPASVLVIKVTFQSFGPRSWIF*ESRPGR
Trigger: CCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCG...GGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTCCTATGATGCGAAGTTaGATCTTCTGGGAGTCGCGG +
Preference number: 4 (lower is better)
Translates to: QMNRHSQICMLASGGLQGPMMRS*IFWESR
Trigger: CCGCGACTCCCAGAAGATCCAACTTCGCATCATAGG...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCACCCGGGGCTGGTTCTaGTCCAAACGCAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELATRGWF*SKRSLF
Trigger: AAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATACCCGGGGCTGGTTCTaGTCCAAACGCAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNTRGWF*SKRSLF
Trigger: AAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGT...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTTCCGCTGGCCTGGACTaGCATCCACCACCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: SFLCPGITFATRQSSERFSAGLD*HPPPGA
Trigger: AGCCCCGGGTGGTGGATGCCAGTCCAGGCCAGCGGA...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGCTCTCTGCCACTCGATaGCTGGGGGCGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQLSATR*LGAGSL
Trigger: AAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGCCATCAGGCTGCAGCTaGTGTCTGGGAGAAGAGACA +
Preference number: 4 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQPSGCS*CLGEET
Trigger: TGTCTCTTCTCCCAGACACCAGCTGCAGCCTGATGG...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp GTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCATCAGGCTGCAGCTaGTGTCTGGGAGAAGAGACA +
Preference number: 4 (lower is better)
Translates to: VNSWHSRSWSNTHCHKAGPSGCS*CLGEET
Trigger: TGTCTCTTCTCCCAGACACCAGCTGCAGCCTGATGG...CCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCCAGAACTCTGAGCTaGACCCATCGCTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPRTLS*THRWSR
Trigger: CCGAGACCAGCGATGGGTCCAGCTCAGAGTTCTGGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGGCCGTATCACCCTCTaGCACTGTCACAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIGRITL*HCHSRG
Trigger: CCCCCTACTGTGACAGTGCCAGAGGGTGATACGGCC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCACCACACACAATAGCCTaGCCGTATCACCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSPHTIA*PYHPLA
Trigger: TGCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGG...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGACTGGTGGACACGGTaGCCATCAGCCTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIDWWTR*PSACTG
Trigger: ACCTGTGCAGGCTGATGGCCACCGTGTCCACCAGTC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTGACTGGTGGACACGGTaGCCATCAGCCTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLDWWTR*PSACTG
Trigger: ACCTGTGCAGGCTGATGGCCACCGTGTCCACCAGTC...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGTGCCATCTGGGGACTaGTGGACACGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIVPSGD*WTRWPS
Trigger: TGATGGCCACCGTGTCCACCAGTCCCCAGATGGCAC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGAGCAGCGTGCCATCTaGGGACTGGTGGACACGGTG +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSEQRAI*GLVDTV
Trigger: CACCGTGTCCACCAGTCCCCAGATGGCACGCTGCTC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTCCCTGGGCTGGGCGGTaGGTGCTGGTGAGACCACCT +
Preference number: 4 (lower is better)
Translates to: SFLCPGITFATRQSSERFPWAGR*VLVRPP
Trigger: AGGTGGTCTCACCAGCACCCACCGCCCAGCCCAGGG...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTATCCCTACTGCCAGATaGGCTGAGCGTGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSIPTAR*AEREAG
Trigger: TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGAT...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGATCCCTACTGCCAGATaGGCTGAGCGTGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: MNYFGLGLELAFIPTARWIPTAR*AEREAG
Trigger: TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGAT...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGAGGCTAAACACTGGGTaGGTTTTTGAAAGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWRLNTG*VFERAN
Trigger: ATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCT...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp TCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGGATCTTCAGAGAAGCTGGTAACTaGCTGCCGTTGAGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: SASDSTAMSPPMMRSWIFREAGN*LPLRLN
Trigger: GTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCT...GAAGATCCAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTCGGGGTAGGCATGGCTaGGCTGGCCCACACAGCCTT +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCRGRHG*AGPHSL
Trigger: AAGGCTGTGTGGGCCAGCCCAGCCATGCCTACCCCG...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGCTGTCCTGTGCTGGCTaGGTTCCTGCTCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQLSCAG*VPARLQ
Trigger: CTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAG...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATGCCCCTGTCCTGTGCTaGCTGGGTTCCTGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHAPVLC*LGSCSP
Trigger: AGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGC...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTAAGCTCCTGCCCCCATaGCCATTCTCCAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSKLLPP*PFSKGL
Trigger: CAGGCCTTTGGAGAATGGCCATGGGGGCAGGAGCTT...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGCCTGTCAGAGGAGATaGGCTGGCCATCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAACQRR*AGHLSA
Trigger: GGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTGCCTGTCAGAGGAGATaGGCTGGCCATCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLACQRR*AGHLSA
Trigger: GGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGC...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCTGTCAGAGGAGATaGGCTGGCCATCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSPMNYFGLGLELAFIPTACQRR*AGHLSA
Trigger: GGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGC...AGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATGCCTGTCAGAGGAGATaGGCTGGCCATCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNACQRR*AGHLSA
Trigger: GGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGC...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCAGCCCAGTCATGGCTaGGCTGGCCCACACAGCCTT +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSQPSHG*AGPHSL
Trigger: AAGGCTGTGTGGGCCAGCCCAGCCATGACTGGGCTG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555445.5
CDS-3UTR TCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATGACGAGTCCAGCTCGTaGTCACAGCCGACAACCCGG +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHDESSS*SQPTTR
Trigger: CCGGGTTGTCGGCTGTGATCACGAGCTGGACTCGTC...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACCACCCATGGGAACTATaGGGATCTGGTTGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHHPWEL*GSGCSL
Trigger: GAGGCTACAACCAGATCCTCATAGTTCCCATGGGTG...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR TCA 90 bp CCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCGCTGCAGTCACTCCATaGGCCGTGGCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PFPASVLVIKVTFQSFGPAAVTP*AVAPAE
Trigger: TTCAGCTGGAGCCACGGCTCATGGAGTGACTGCAGC...GGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCGCCAACGCCACAACTaGCAGAACACTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSRQRHN*QNTLPR
Trigger: CCTGGGGAGAGTGTTCTGTCAGTTGTGGCGTTGGCG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCACCTCCTGGGGGAGATaGCAGGGCTGCGTGTTACAA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFITSWGR*QGCVLQ
Trigger: TTGTAACACGCAGCCCTGTCATCTCCCCCAGGAGGT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCCGGGGCAGTGTCGTCTaGGCAGGAGAGCCGCACCAA +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSIRGSVV*AGEPHQ
Trigger: TTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCG...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGCCTGCAGGGGGTGGATaGTCAGGGATCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQPAGGG*SGIRRT
Trigger: AGTTCGACGGATCCCTGATCATCCACCCCCTGCAGG...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTCCATGTCACCCCCTATaGTGCGAAGTTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: QMNRHSQICMLASGGLQGPCHPL*CEVGSS
Trigger: AGAAGATCCAACTTCGCATCATAGGGGGTGACATGG...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGCTCGGTCCTGCCCATTaGAAGCGACACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: MNYFGLGLELAFIPTARWLGPAH*KRHRCR
Trigger: TCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAG...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCTCGGTCCTGCCCATTaGAAGCGACACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFLGPAH*KRHRCR
Trigger: TCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGAGTAGGGGGCAGTCCTaGGATTGTCAGCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQSRGQS*DCQLPQ
Trigger: CTGGGGGAGCTGACAATCTCAGGACTGCCCCCTACT...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGTGAGGCTGGAAACGTaGACAGCTGGCACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAVRLET*TAGTAE
Trigger: TTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCAC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGTGAGGCTGGAAACGTaGACAGCTGGCACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFVRLET*TAGTAE
Trigger: TTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCAC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGTGAGGCTGGAAACGTaGACAGCTGGCACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERVRLET*TAGTAE
Trigger: TTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTCAC...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAAGACACTTGTCCTCCTaGTTGGACGAGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERRHLSS*LDESSS
Trigger: CGAGCTGGACTCGTCCAAGCAGGAGGACAAGTGTCT...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCAGCCAGGAAGTTCCTaGTGGCAGCAGCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYQPGSS*WQQPRR
Trigger: TCGACGAGGCTGCTGCCAGCAGGAACTTCCTGGCTG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCCCCGTCAGACGAGATaGAGTACACGGAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYPRQTR*STRSGT
Trigger: AGTCCCGCTCCGTGTACTGCATCTCGTCTGACGGGG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCCCCAGGTGCCAACATaGCAGGCCTGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSPQVPT*QAWSLR
Trigger: CCTCAGTGACCAGGCCTGGCATGTTGGCACCTGGGG...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCCCAGGTGCCAACATaGCAGGCCTGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAPQVPT*QAWSLR
Trigger: CCTCAGTGACCAGGCCTGGCATGTTGGCACCTGGGG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCAGCATAGACCCCAGGTaGCAACATGCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFISIDPR*QHARPG
Trigger: ACCAGGCCTGGCATGTTGGCACCTGGGGTCTATGCT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTCCGAGTGCCCGAGCTaGAGCTCTTGGAGCATAGAC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFISECPS*SSWSID
Trigger: GTCTATGCTCCAAGAGCTGCAGCTCGGGCACTCGGA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTACAGGCTTGGAGTGCTaGAGGCTCCCGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTATGLEC*RLPQWL
Trigger: CAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGT...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTTTGCTGGCAGGGGTGTaGACATCCTGCATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSLLAGV*TSCMLG
Trigger: CCCCAGCATGCAGGATGTGCACACCCCTGCCAGCAA...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTACGGCATCCAGGGGTTaGTGGCAGGGGTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSTASRG*WQGCAH
Trigger: ATGTGCACACCCCTGCCAGCAACCCCTGGATGCCGT...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTCTGAGGCCCGAGAGATaGCGTGTGGCCATCGGGGCA +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCLRPER*RVAIGA
Trigger: TGCCCCGATGGCCACACGGCATCTCTCGGGCCTCAG...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCACCATACGACTTTGTaGAGCCAGCGTGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIHHTTL*SQRDGA
Trigger: GGCCCCATCACGCTGGCTGCACAAAGTCGTATGGTG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACTGGGCATGCCCCCGGTaGTGTCACCACCATACGACT +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYWACPR*CHHHTT
Trigger: AGTCGTATGGTGGTGACAGCACCGGGGGCATGCCCA...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCCCAAGAGGACCGGCTaGAGTGGCCACGTTGTCATA +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFPKRTG*SGHVVI
Trigger: TATGACAACGTGGCCACTGCAGCCGGTCCTCTTGGG...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGCCCAAGAGGACCGGCTaGAGTGGCCACGTTGTCATA +
Preference number: 4 (lower is better)
Translates to: YELFWTGAGTSLHPYCQMPKRTG*SGHVVI
Trigger: TATGACAACGTGGCCACTGCAGCCGGTCCTCTTGGG...CATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR GCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGCGAGGGCTCCACACCTaGCAAGCTAATCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWRGLHT*QANPWL
Trigger: CAGCCATGGATTAGCTTGGCAGGTGTGGAGCCCTCG...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR GCA 90 bp CATCTATTCCATTTTGCCAACAAGGGTTATGCTGTTAACCCTCTGCACCAGATTCAACTGCCCCAGGGCTaGCTGCACCAACGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: HLFHFANKGYAVNPLHQIQLPQG*LHQRGL
Trigger: GAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTG...AATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGAATAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTCCCGCGTCCTCTGCCTaGAGGGGGTGGATGATCAGG +
Preference number: 4 (lower is better)
Translates to: SFLCPGITFATRQSSERFPASSA*RGWMIR
Trigger: CCTGATCATCCACCCCCTGCAGGCAGAGGACGCGGG...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGCCACAGCTGTAGGTaGCCGCGTCCTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCCHSCR*PRPLPA
Trigger: TGCAGGCAGAGGACGCGGGCACCTACAGCTGTGGCA...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTGGCTGCCCATCTCTCTaGCACTCGATGGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCGCPSL*HSMAGG
Trigger: GCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCC...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGGAGAAGAGACAGGCTaGCCATCTCTCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIGEETG*PSLCHS
Trigger: CGAGTGGCAGAGAGATGGGCAGCCTGTCTCTTCTCC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTAGGGAGCCATCAGGCTaGAGCTGGTGTCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFREPSG*SWCLGE
Trigger: TTCTCCCAGACACCAGCTGCAGCCTGATGGCTCCCT...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCTGAGATCGCGCCATTaGCCTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYLRSRH*PPAWAT
Trigger: TGTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCGCGGGCAGCCCAGTCTaGGCAAGAGCCATGGGCACT +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSIAGSPV*ARAMGT
Trigger: AGTGCCCATGGCTCTTGCGCAGACTGGGCTGCCCGC...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTTGCTGGCTGGGTTCCTaGTCGCCTGCAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCCWLGS*SPAGLL
Trigger: CAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCA...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCAGGCTGTTGGTCTTaGCGCCAGAGACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPGCWS*RQRPPE
Trigger: TTCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTCCAGGCTGTTGGTCTTaGCGCCAGAGACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLPGCWS*RQRPPE
Trigger: TTCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGG...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCCTGGACCCAAGCTCCTaGCCCCATGGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVLDPSS*PHGHSP
Trigger: TGGAGAATGGCCATGGGGGCAGGAGCTTGGGTCCAG...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATCGAGGGCTCCACACCTaGCAAGCTAATCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNRGLHT*QANPVG
Trigger: TCCTACAGGATTAGCTTGGCAGGTGTGGAGCCCTCG...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCGAGGGCTCCACACCTaGCAAGCTAATCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRGLHT*QANPVG
Trigger: TCCTACAGGATTAGCTTGGCAGGTGTGGAGCCCTCG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCGAGGGCTCCACACCTaGCAAGCTAATCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELARGLHT*QANPVG
Trigger: TCCTACAGGATTAGCTTGGCAGGTGTGGAGCCCTCG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCAGGGATCCGTCGAACTaGAGCCTGTGCCTGTCAGAG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIRDPSN*SLCLSE
Trigger: CTCTGACAGGCACAGGCTGCAGTTCGACGGATCCCT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCGTCACAGCCAGATTTaGATGTTGGCCTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLRHSQI*MLASGG
Trigger: CCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCGTCACAGCCAGATTTaGATGTTGGCCTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRHSQI*MLASGG
Trigger: CCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCGTCACAGCCAGATTTaGATGTTGGCCTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESRHSQI*MLASGG
Trigger: CCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGCGTCACAGCCAGATTTaGATGTTGGCCTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVRHSQI*MLASGG
Trigger: CCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACG...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCAGCCGCATCTCAGCCTaGGGGAGACGCATTGGGTTA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFISRISA*GRRIGL
Trigger: TAACCCAATGCGTCTCCCGCAGGCTGAGATGCGGCT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS-3UTR CCA 90 bp GAGGCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCACTTGTCCTCCTGCTTaGACGAGTCCAGCTCGTGAT +
Preference number: 4 (lower is better)
Translates to: EAGNVNSWHSRSWSNTHCTCPPA*TSPARD
Trigger: ATCACGAGCTGGACTCGTCCAAGCAGGAGGACAAGT...GCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGGCTCGTAATGCAGGATaGTGCTGGCTGCTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQARNAG*CWLLAG
Trigger: CCCTGCCAGCAGCCAGCACCATCCTGCATTACGAGC...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAACCGGGGTTGGGCTCCTaGCTGATGAGCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEPGLGS*LMSSMT
Trigger: GGTCATCGAGCTCATCAGCCAGGAGCCCAACCCCGG...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTCACTCCATGAGCCGTaGCTCCAGCTGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHSLHEP*LQLKPG
Trigger: CCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTGA...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTTCACTCCATGAGCCGTaGCTCCAGCTGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTASLHEP*LQLKPG
Trigger: CCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTGA...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGAGGCCTCATGGTCGATaGTGCAGAACACCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQRPHGR*CRTPGG
Trigger: CCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCT...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACGGTTACAGGCCTGAATaGCAGGGGGCTTCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYGYRPE*QGASQA
Trigger: TGCCTGGGAAGCCCCCTGCCATTCAGGCCTGTAACC...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAACCCACCACTGGCCTCTaGAGTCTGAGGCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEPTTGL*SLRQGT
Trigger: AGTCCCCTGCCTCAGACTCCAGAGGCCAGTGGTGGG...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCCACCACTGGCCTCTaGAGTCTGAGGCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPTTGL*SLRQGT
Trigger: AGTCCCCTGCCTCAGACTCCAGAGGCCAGTGGTGGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCCCTCGTTCTCCCCTGTaGTCACCCCTGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSIPRSPL*SPLAEG
Trigger: CCCCTCAGCCAGGGGTGACCACAGGGGAGAACGAGG...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTTGCCTTGGTCGCCCCTaGGGTCACCTCGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCCLGRP*GHLVLP
Trigger: GGGGAGAACGAGGTGACCCCAGGGGCGACCAAGGCA...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAAGCCCCGGCACTCACTaGGCTCATTCTGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAESPGTH*AHSAGP
Trigger: AGGCCCAGCAGAATGAGCCCAGTGAGTGCCGGGGCT...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGAGGACCGGCTGCAGTaGCCACGTTGTCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIEDRLQ*PRCHSN
Trigger: GTTGCTATGACAACGTGGCCACTGCAGCCGGTCCTC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTAAGCTAATCCATGGCTaGGCTGGCCCACACAGCCTT +
Preference number: 4 (lower is better)
Translates to: PSPMNYFGLGLELAFIPTKLIHG*AGPHSL
Trigger: AAGGCTGTGTGGGCCAGCCCAGCCATGGATTAGCTT...AGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS-3UTR CCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCG +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCFCQAA*DSGAVS
Trigger: CGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAA...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTCAGAGGAGATGGGCTaGCCATCTTTCTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFSEEMG*PSFCQA
Trigger: TGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCAGAGGAGATGGGCTaGCCATCTTTCTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSSEEMG*PSFCQA
Trigger: TGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGA...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGTCTGCCTGCAGGGGGTaGATGATCAGGGATCCGTCG +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQSACRG*MIRDPS
Trigger: CGACGGATCCCTGATCATCCACCCCCTGCAGGCAGA...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCTGGGAGTCGCGGCCTaGCCGGGTGCTGCCACAGCT +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCLGVAA*PGAATA
Trigger: AGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCGAAGTTGGATCTTCTaGGAGTCGCGGCCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTARSWIF*ESRPGR
Trigger: CCGGCCAGGCCGCGACTCCCAGAAGATCCAACTTCG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCACCCGGGGCTGGTTCTaGTCCAAACGCAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPTRGWF*SKRSLF
Trigger: AAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGT...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCACCACCCGGGGCTaGTTCTGGTCCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCSTTRG*FWSKRS
Trigger: GCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGA...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGTCATCCGGATCCGCTaGCCTGGACTGGCATCCACC +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAVIRIR*PGLAST
Trigger: GGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGAC...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACGCTGCAGCTGGTGTCTaGGAGAAGAGACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYAAAGV*EKRQAA
Trigger: GGCAGCCTGTCTCTTCTCCCAGACACCAGCTGCAGC...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGCTGCAGCTGGTGTCTaGGAGAAGAGACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSAAAGV*EKRQAA
Trigger: GGCAGCCTGTCTCTTCTCCCAGACACCAGCTGCAGC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCATCAGGCTGCAGCTaGTGTCTGGGAGAAGAGACA +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPSGCS*CLGEET
Trigger: TGTCTCTTCTCCCAGACACCAGCTGCAGCCTGATGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCATCAGGCTGCAGCTaGTGTCTGGGAGAAGAGACA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPSGCS*CLGEET
Trigger: TGTCTCTTCTCCCAGACACCAGCTGCAGCCTGATGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCAGCTGGACCCATCGCTaGTCTCGGTCCTGCCCATTG +
Preference number: 4 (lower is better)
Translates to: PFPASVLVIKVTFQSFGPSWTHR*SRSCPL
Trigger: CAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCT...GGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGGGCCGTATCACCCTCTaGCACTGTCACAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQGRITL*HCHSRG
Trigger: CCCCCTACTGTGACAGTGCCAGAGGGTGATACGGCC...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACGGCCGTATCACCCTCTaGCACTGTCACAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYGRITL*HCHSRG
Trigger: CCCCCTACTGTGACAGTGCCAGAGGGTGATACGGCC...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATCCATCTGGGGACTGGTaGACACGGTGGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHPSGDW*TRWPSA
Trigger: GGCTGATGGCCACCGTGTCCACCAGTCCCCAGATGG...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTGAGCAGCGTGCCATCTaGGGACTGGTGGACACGGTG +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSEQRAI*GLVDTV
Trigger: CACCGTGTCCACCAGTCCCCAGATGGCACGCTGCTC...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCGGATCAAATCACAGTTaGCCAGCTCTGGCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: SPMNYFGLGLELAFIPTAGSNHS*PALAGR
Trigger: TCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCC...GGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCTCATTGCCACAAAGCTaGGCCTGCAGGATCAAATCA +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSSLPQS*ACRIKS
Trigger: TGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGA...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCATCCCTACTGCCAGATaGGCTGAGCGTGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIIPTAR*AEREAG
Trigger: TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGAT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGATCCCTACTGCCAGATaGGCTGAGCGTGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWIPTAR*AEREAG
Trigger: TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGAT...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCGAGGCAAAGTTATTaGCATTGCCATGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPRQSY*HCHGSR
Trigger: GCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATCCATGGAGAGATCCCTaGCAGCTGCTCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNPWRDP*QLLMHS
Trigger: AGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGG...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCATGGAGAGATCCCTaGCAGCTGCTCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPWRDP*QLLMHS
Trigger: AGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCATGGAGAGATCCCTaGCAGCTGCTCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPWRDP*QLLMHS
Trigger: AGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCCAGAAGCCCCAGGCTaGGGACGACGGGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCPEAPG*GRRGPW
Trigger: CCATGGGCCCCGTCGTCCCCAGCCTGGGGCTTCTGG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCCGCCACCATCCGTGTaGGTGCTCCTTCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSPPPSV*VLLPEA
Trigger: GGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGG...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAACCTGGCCCAGGCTGTTaGTCTTGCCGCCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEPGPGC*SCRQRP
Trigger: TGGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGG...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCAAGCTCCTGCCCCCATaGCCATTCTCCAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPKLLPP*PFSKGL
Trigger: CAGGCCTTTGGAGAATGGCCATGGGGGCAGGAGCTT...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCAAGCTCCTGCCCCCATaGCCATTCTCCAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIKLLPP*PFSKGL
Trigger: CAGGCCTTTGGAGAATGGCCATGGGGGCAGGAGCTT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTGCCTGTCAGAGGAGATaGGCTGGCCATCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLACQRR*AGHLSA
Trigger: GGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGC...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTCACCCATGGGAACTATaGGGATCTGGTTGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSHPWEL*GSGCSL
Trigger: GAGGCTACAACCAGATCCTCATAGTTCCCATGGGTG...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTGGTCCAGTGCCCATTaGGGTAGTATTCCCCACGAA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFWSSAH*GSIPHE
Trigger: TTCGTGGGGAATACTACCTCAATGGGCACTGGACCA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTGGTCCAGTGCCCATTaGGGTAGTATTCCCCACGAA +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLWSSAH*GSIPHE
Trigger: TTCGTGGGGAATACTACCTCAATGGGCACTGGACCA...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCTGGTCCAGTGCCCATTaGGGTAGTATTCCCCACGAA +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESWSSAH*GSIPHE
Trigger: TTCGTGGGGAATACTACCTCAATGGGCACTGGACCA...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGCTGCAGTCACTCCATaGGCCGTGGCTCCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAAAVTP*AVAPAE
Trigger: TTCAGCTGGAGCCACGGCTCATGGAGTGACTGCAGC...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACAGTCTCCGGGCAAGGGTaGAGATTGCAGGAACGCCGG +
Preference number: 4 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTVSGQG*RLQERR
Trigger: CCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGAC...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTTGCAGGTTACAGGCCTaGATGGCAGGGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTACRLQA*MAGGFP
Trigger: TGGGAAGCCCCCTGCCATTCAGGCCTGTAACCTGCA...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTGCCCAATGGCACAGATaGCCTGTCGCCTCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCAQWHR*PVASEC
Trigger: GCACTCGGAGGCGACAGGTCATCTGTGCCATTGGGC...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTGCCCAATGGCACAGATaGCCTGTCGCCTCCGAGTGC +
Preference number: 4 (lower is better)
Translates to: SFLCPGITFATRQSSERFAQWHR*PVASEC
Trigger: GCACTCGGAGGCGACAGGTCATCTGTGCCATTGGGC...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACACCTCCTGGGGGAGATaGCAGGGCTGCGTGTTACAA +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYTSWGR*QGCVLQ
Trigger: TTGTAACACGCAGCCCTGTCATCTCCCCCAGGAGGT...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCTGCAGGGGGTGGATaGTCAGGGATCCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPAGGG*SGIRRT
Trigger: AGTTCGACGGATCCCTGATCATCCACCCCCTGCAGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCGCTGGGTCCCTGGGCTaGGGGAAGCGGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCAGSLG*GKRLSS
Trigger: TGAGCTGAGCCGCTTCCCTCAGCCCAGGGACCCAGC...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCTCGGTCCTGCCCATTaGAAGCGACACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFLGPAH*KRHRCR
Trigger: TCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAG...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTAGTAGGGGGCAGTCCTaGGATTGTCAGCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTASRGQS*DCQLPQ
Trigger: CTGGGGGAGCTGACAATCTCAGGACTGCCCCCTACT...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATAGTAGGGGGCAGTCCTaGGATTGTCAGCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHSRGQS*DCQLPQ
Trigger: CTGGGGGAGCTGACAATCTCAGGACTGCCCCCTACT...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTCGTTCCTGGACCACCTaGTGTTCACACTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSRSWTT*CSHFLL
Trigger: CAGGAGAAAGTGTGAACATCAGGTGGTCCAGGAACG...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCGTTCCTGGACCACCTaGTGTTCACACTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELARSWTT*CSHFLL
Trigger: CAGGAGAAAGTGTGAACATCAGGTGGTCCAGGAACG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCGTTCCTGGACCACCTaGTGTTCACACTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRSWTT*CSHFLL
Trigger: CAGGAGAAAGTGTGAACATCAGGTGGTCCAGGAACG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTAGATGCAAACACTGCTaGAGGCTACAGAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVRCKHC*RLQREA
Trigger: AGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCT...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCAGACGGAGGTTGCAGTaGGCTGAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: PFPASVLVIKVTFQSFGPRRRLQ*AEIAPL
Trigger: CAATGGCGCGATCTCAGCTCACTGCAACCTCCGTCT...GGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTGAGAGACTAGAGCAATaGACCATCGCTGATTTTAGC +
Preference number: 4 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRAERLEQ*TIADFS
Trigger: GCTAAAATCAGCGATGGTTCATTGCTCTAGTCTCTC...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGTACACAGGTGTCAGATaGACCGTCACAGCCAGATTT +
Preference number: 4 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRYTGVR*TVTARF
Trigger: AAATCTGGCTGTGACGGTTCATCTGACACCTGTGTA...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCAGACACTTGTCCTCCTaGTTGGACGAGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIRHLSS*LDESSS
Trigger: CGAGCTGGACTCGTCCAAGCAGGAGGACAAGTGTCT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTAGACACTTGTCCTCCTaGTTGGACGAGTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFRHLSS*LDESSS
Trigger: CGAGCTGGACTCGTCCAAGCAGGAGGACAAGTGTCT...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTAGCGTCAAAGGTGCCTaGGACGGGGTAGCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTASVKGA*DGVAGR
Trigger: ACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCT...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCAGCGTCAAAGGTGCCTaGGACGGGGTAGCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCSVKGA*DGVAGR
Trigger: ACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCT...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CATCTATTCCATTTTGCCAACAAGGGTTATGCTGTTAACCCTCTGCACCAGATTCGCCACACTCCGCGCTaGAGTCACTCCATGAGCCGT +
Preference number: 4 (lower is better)
Translates to: HLFHFANKGYAVNPLHQIRHTPR*SHSMSR
Trigger: ACGGCTCATGGAGTGACTGCAGCGCGGAGTGTGGCG...AATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGAATAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACGGCAAGGGTGAAGATTaGAGGAACGCCGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYGKGED*RNAGQL
Trigger: CAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCC...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGGGCAAGGGTGAAGATTaGAGGAACGCCGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQGKGED*RNAGQL
Trigger: CAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCC...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCCCGTCAGACGAGATaGAGTACACGGAGCGGGACT +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAPRQTR*STRSGT
Trigger: AGTCCCGCTCCGTGTACTGCATCTCGTCTGACGGGG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGAGCATAGACCCCAGGTaGCAACATGCCAGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQSIDPR*QHARPG
Trigger: ACCAGGCCTGGCATGTTGGCACCTGGGGTCTATGCT...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACTCCGAGTGCCCGAGCTaGAGCTCTTGGAGCATAGAC +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYSECPS*SSWSID
Trigger: GTCTATGCTCCAAGAGCTGCAGCTCGGGCACTCGGA...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTCGTGAGGACTGTGTCTaGAGTCGTGGGGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SFLCPGITFATRQSSERFREDCV*SRGALS
Trigger: GCTCAGGGCCCCACGACTGCAGACACAGTCCTCACG...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCCGTGAGGACTGTGTCTaGAGTCGTGGGGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSIREDCV*SRGALS
Trigger: GCTCAGGGCCCCACGACTGCAGACACAGTCCTCACG...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCACCATACGACTTTGTaGAGCCAGCGTGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYHHTTL*SQRDGA
Trigger: GGCCCCATCACGCTGGCTGCACAAAGTCGTATGGTG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTTGGGCATGCCCCCGGTaGTGTCACCACCATACGACT +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCWACPR*CHHHTT
Trigger: AGTCGTATGGTGGTGACAGCACCGGGGGCATGCCCA...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTTGGGCATGCCCCCGGTaGTGTCACCACCATACGACT +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSWACPR*CHHHTT
Trigger: AGTCGTATGGTGGTGACAGCACCGGGGGCATGCCCA...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTTCACTGGGCTCATTCTaGTGGGCCTGGGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SFLCPGITFATRQSSERFSLGSF*WAWGWW
Trigger: CCACCAGCCCCAGGCCCAGCAGAATGAGCCCAGTGA...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCCCAAGAGGACCGGCTaGAGTGGCCACGTTGTCATA +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYPKRTG*SGHVVI
Trigger: TATGACAACGTGGCCACTGCAGCCGGTCCTCTTGGG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAGWPSF*QAAWDS
Trigger: GGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCC...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCAGGGATCCGTCGAACTaGAGCCTGTGCCTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCRDPSN*SLCLSA
Trigger: CGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCT...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTAGGGATCCGTCGAACTaGAGCCTGTGCCTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTARDPSN*SLCLSA
Trigger: CGCTGACAGGCACAGGCTGCAGTTCGACGGATCCCT...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR GCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTTCCCCTGGTAGGCACTaGACGTGTAGGAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSSPGRH*TCRSPH
Trigger: ATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGA...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp CCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTCCCCTGGTAGGCACTaGACGTGTAGGAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PFPASVLVIKVTFQSFGPSPGRH*TCRSPH
Trigger: ATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGA...GGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCACAAAGCTGGGCCTaGAGGATCAAATCACAGTTG +
Preference number: 4 (lower is better)
Translates to: VNSWHSRSWSNTHCHKAGPQSWA*RIKSQL
Trigger: CAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGG...CCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGCCAGGCTGTTGGTCTTaGCGCCAGAGACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQPGCWS*RQRPPE
Trigger: TTCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGG...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCTGGACCCAAGCTCCTaGCCCCATGGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTALDPSS*PHGHSP
Trigger: TGGAGAATGGCCATGGGGGCAGGAGCTTGGGTCCAG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGTCGAACTGCAGCCTGTaGCTGTCAGAGGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQSNCSL*LSEEMG
Trigger: GCCCATCTCCTCTGACAGGCACAGGCTGCAGTTCGA...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTTCCCTGTTACTGCATTaGCCACAACCCTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPSLLLH*PQPFPI
Trigger: AATGGGGAAGGGTTGTGGGCAATGCAGTAACAGGGA...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCACTTGTCCTCCTGCTTaGACGAGTCCAGCTCGTGAT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELATCPPA*TSPARD
Trigger: ATCACGAGCTGGACTCGTCCAAGCAGGAGGACAAGT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTACTTGTCCTCCTGCTTaGACGAGTCCAGCTCGTGAT +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSTCPPA*TSPARD
Trigger: ATCACGAGCTGGACTCGTCCAAGCAGGAGGACAAGT...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTCTGCCTTCCAGCGCTTaGTCTCCGGGCAAGGGTGAA +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCLPSSA*SPGKGE
Trigger: TTCACCCTTGCCCGGAGACCAAGCGCTGGAAGGCAG...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGAGCACGCTGCGGTATaGAGCAAAGAACCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAEHAAV*SKEPLS
Trigger: TGAAAGGGGTTCTTTGCTCCATACCGCAGCGTGCTC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCGAGCTGCAGCTCTTaGAGCATAGACCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAPSCSS*SIDPRC
Trigger: GCACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATCCGAGCTGCAGCTCTTaGAGCATAGACCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHPSCSS*SIDPRC
Trigger: GCACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGG...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGCACATCCTGCATGCTaGGGACCTCCTGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEAHPAC*GPPGGD
Trigger: ATCTCCCCCAGGAGGTCCCCAGCATGCAGGATGTGC...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCGCACATCCTGCATGCTaGGGACCTCCTGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCAHPAC*GPPGGD
Trigger: ATCTCCCCCAGGAGGTCCCCAGCATGCAGGATGTGC...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGCATCCAGGGGTTGCTaGCAGGGGTGTGCACATCCT +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAASRGC*QGCAHP
Trigger: AGGATGTGCACACCCCTGCCAGCAACCCCTGGATGC...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCGCATCCAGGGGTTGCTaGCAGGGGTGTGCACATCCT +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCASRGC*QGCAHP
Trigger: AGGATGTGCACACCCCTGCCAGCAACCCCTGGATGC...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGCATCCAGGGGTTGCTaGCAGGGGTGTGCACATCCT +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEASRGC*QGCAHP
Trigger: AGGATGTGCACACCCCTGCCAGCAACCCCTGGATGC...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTAGCCCCGGCACTCACTaGGCTCATTCTGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCSPGTH*AHSAGP
Trigger: AGGCCCAGCAGAATGAGCCCAGTGAGTGCCGGGGCT...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGAGCCCCGGCACTCACTaGGCTCATTCTGCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLSPGTH*AHSAGP
Trigger: AGGCCCAGCAGAATGAGCCCAGTGAGTGCCGGGGCT...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGAGGACCGGCTGCAGTaGCCACGTTGTCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSEDRLQ*PRCHSN
Trigger: GTTGCTATGACAACGTGGCCACTGCAGCCGGTCCTC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CATCTATTCCATTTTGCCAACAAGGGTTATGCTGTTAACCCTCTGCACCAGATTTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCG +
Preference number: 4 (lower is better)
Translates to: HLFHFANKGYAVNPLHQIFCQAA*DSGAVS
Trigger: CGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAA...AATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGAATAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGACCTGTCAGAGGAGATaGGCTGGCCATCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWTCQRR*AGHLSA
Trigger: GGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGT...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTTCTGCCTGCAGGGGGTaGATGATCAGGGATCCGTCG +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSSACRG*MIRDPS
Trigger: CGACGGATCCCTGATCATCCACCCCCTGCAGGCAGA...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCTATGATGCGAAGTTaGATCTTCTGGGAGTCGCGG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPMMRS*IFWESR
Trigger: CCGCGACTCCCAGAAGATCCAACTTCGCATCATAGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCTATGATGCGAAGTTaGATCTTCTGGGAGTCGCGG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPMMRS*IFWESR
Trigger: CCGCGACTCCCAGAAGATCCAACTTCGCATCATAGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACATCCACCACCCGGGGCTaGTTCTGGTCCAAACGCAGC +
Preference number: 4 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTSTTRG*FWSKRS
Trigger: GCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGA...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCTGCCACTCGATGGCTaGGGGCGGGAAGCCTTCGGC +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCLPLDG*GREAFG
Trigger: GCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGCTGCAGCTGGTGTCTaGGAGAAGAGACAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAAAAGV*EKRQAA
Trigger: GGCAGCCTGTCTCTTCTCCCAGACACCAGCTGCAGC...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCATCAGGCTGCAGCTaGTGTCTGGGAGAAGAGACA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPSGCS*CLGEET
Trigger: TGTCTCTTCTCCCAGACACCAGCTGCAGCCTGATGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTAGCTGGACCCATCGCTaGTCTCGGTCCTGCCCATTG +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSSWTHR*SRSCPL
Trigger: CAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCT...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAAGCTGGACCCATCGCTaGTCTCGGTCCTGCCCATTG +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAESWTHR*SRSCPL
Trigger: CAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCT...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATCCCAGAACTCTGAGCTaGACCCATCGCTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHPRTLS*THRWSR
Trigger: CCGAGACCAGCGATGGGTCCAGCTCAGAGTTCTGGG...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCCAGAACTCTGAGCTaGACCCATCGCTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAPRTLS*THRWSR
Trigger: CCGAGACCAGCGATGGGTCCAGCTCAGAGTTCTGGG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCACACACAATAGCCTaGCCGTATCACCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPHTIA*PYHPLA
Trigger: TGCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCGTGCCATCTGGGGACTaGTGGACACGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCVPSGD*WTRWPS
Trigger: TGATGGCCACCGTGTCCACCAGTCCCCAGATGGCAC...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCTTGGCCAGCTCTGGCTaGTCGACGCAGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSILASSG*STQSLP
Trigger: TGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAA...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAACAGTTGGCCAGCTCTaGCTGGTCGACGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAETVGQL*LVDAVP
Trigger: AGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGT...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGGATCAAATCACAGTTaGCCAGCTCTGGCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFGSNHS*PALAGR
Trigger: TCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATGGATCAAATCACAGTTaGCCAGCTCTGGCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNGSNHS*PALAGR
Trigger: TCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCC...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTGGAAACGTGAACAGCTaGCACAGCAGAAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSGNVNS*HSRSWS
Trigger: ACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCC...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCGGAAACGTGAACAGCTaGCACAGCAGAAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAGNVNS*HSRSWS
Trigger: ACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCC...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGGAAACGTGAACAGCTaGCACAGCAGAAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERGNVNS*HSRSWS
Trigger: ACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCC...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGGGAAACGTGAACAGCTaGCACAGCAGAAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVGNVNS*HSRSWS
Trigger: ACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCC...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGGAAACGTGAACAGCTaGCACAGCAGAAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: MNYFGLGLELAFIPTARWGNVNS*HSRSWS
Trigger: ACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCC...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGGAAACGTGAACAGCTaGCACAGCAGAAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETGNVNS*HSRSWS
Trigger: ACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCC...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACATCCCTACTGCCAGATaGGCTGAGCGTGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYIPTAR*AEREAG
Trigger: TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGAT...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCATCCCTACTGCCAGATaGGCTGAGCGTGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVIPTAR*AEREAG
Trigger: TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGAT...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGCTGCAGCTGGTGTCTGAAAACAGCAGCCTGTaGTTATGTCAGAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: FYSHSANDQGAIRLQLVSENSSL*LCQRCK
Trigger: TTTGCATCTCTGACATAACCACAGGCTGCTGTTTTC...AGACACCAGCTGCAGCCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CCA 90 bp CCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTCAGAAGCGGTTACATTaGCCCACAGAGGCAACGAAG +
Preference number: 4 (lower is better)
Translates to: PSPMNYFGLGLELAFIPTQKRLH*PTEATK
Trigger: CTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTG...AGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCGAGGCAAAGTTATTaGCATTGCCATGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPRQSY*HCHGSR
Trigger: GCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTAAGCTCCTGCCCCCATaGCCATTCTCCAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSKLLPP*PFSKGL
Trigger: CAGGCCTTTGGAGAATGGCCATGGGGGCAGGAGCTT...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATGCCAGATTTGCATGTTaGCCTCAGGAGGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNARFAC*PQEGFK
Trigger: CTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGC...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACAAGTGGAAAGGGACTTaGAAGCTCATAGAATCCATG +
Preference number: 4 (lower is better)
Translates to: LELAFIPTARWAEREAGNKWKGT*KLIESM
Trigger: CATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTT...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
3UTR CAA 72 bp TTTACACAGGTGTCAGATGAACCGTCACAGCCAGATTaGCATGTTGGCCTCAGGAGGGCTTCAAGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: FTQVSDEPSQPD*HVGLRRASRSN
Trigger: GTTGGACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCACCCATGGGAACTATaGGGATCTGGTTGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIHPWEL*GSGCSL
Trigger: GAGGCTACAACCAGATCCTCATAGTTCCCATGGGTG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000554301.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTTGCAGGTTACAGGCCTaGATGGCAGGGGGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SFLCPGITFATRQSSERFCRLQA*MAGGFP
Trigger: TGGGAAGCCCCCTGCCATTCAGGCCTGTAACCTGCA...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCTGGCCTCTGGAGTCTaGGGCAGGGGACTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCLASGV*GRGLLR
Trigger: CCTCAGGAGTCCCCTGCCTCAGACTCCAGAGGCCAG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCAGAAGCCACTGCCCTTaGCCTGGGCATGCCCCCGGT +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCRSHCP*PGHAPG
Trigger: ACCGGGGGCATGCCCAGGTCAAGGGCAGTGGCTTCT...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCATGTCACCCCCTATaGTGCGAAGTTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPCHPL*CEVGSS
Trigger: AGAAGATCCAACTTCGCATCATAGGGGGTGACATGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGCCATGTCACCCCCTATaGTGCGAAGTTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: MNYFGLGLELAFIPTARWPCHPL*CEVGSS
Trigger: AGAAGATCCAACTTCGCATCATAGGGGGTGACATGG...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR TCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCCGCAAGTTGTAAATaGGCAGCGTGCCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPASCK*AACHLG
Trigger: CCCCAGATGGCACGCTGCTCATTTACAACTTGCGGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTCCCTAGCCCTATaGACTATTTTGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAFSLAL*TILDWG
Trigger: GCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGATTCTCCCTAGCCCTATaGACTATTTTGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERFSLAL*TILDWG
Trigger: GCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAA...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTAGACGGAGGTTGCAGTaGGCTGAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSRRRLQ*AEIAPL
Trigger: CAATGGCGCGATCTCAGCTCACTGCAACCTCCGTCT...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTAGCTACTCAGAAGGCTaGCACAGGAGAATCAAGAAC +
Preference number: 4 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPSYSEG*HRRIKN
Trigger: GTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCT...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTAGCGTCAAAGGTGCCTaGGACGGGGTAGCAGGTCGT +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCSVKGA*DGVAGR
Trigger: ACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCT...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTGGCAAGGGTGAAGATTaGAGGAACGCCGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSGKGED*RNAGQL
Trigger: CAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCC...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCGAGTGCCCGAGCTaGAGCTCTTGGAGCATAGAC +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCSECPS*SSWSID
Trigger: GTCTATGCTCCAAGAGCTGCAGCTCGGGCACTCGGA...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTTCCGAGTGCCCGAGCTaGAGCTCTTGGAGCATAGAC +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTASECPS*SSWSID
Trigger: GTCTATGCTCCAAGAGCTGCAGCTCGGGCACTCGGA...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCTTGCTGGCAGGGGTGTaGACATCCTGCATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSILLAGV*TSCMLG
Trigger: CCCCAGCATGCAGGATGTGCACACCCCTGCCAGCAA...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTTTGCTGGCAGGGGTGTaGACATCCTGCATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SFLCPGITFATRQSSERFLLAGV*TSCMLG
Trigger: CCCCAGCATGCAGGATGTGCACACCCCTGCCAGCAA...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp CATCTATTCCATTTTGCCAACAAGGGTTATGCTGTTAACCCTCTGCACCAGATTACGGCATCCAGGGGTTaGTGGCAGGGGTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: HLFHFANKGYAVNPLHQITASRG*WQGCAH
Trigger: ATGTGCACACCCCTGCCAGCAACCCCTGGATGCCGT...AATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGAATAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAACACCATACGACTTTGTaGAGCCAGCGTGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEHHTTL*SQRDGA
Trigger: GGCCCCATCACGCTGGCTGCACAAAGTCGTATGGTG...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR GCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCGGAGAAGAGACAGGCTaGCCATCTCTCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCGEETG*PSLCHS
Trigger: CGAGTGGCAGAGAGATGGGCAGCCTGTCTCTTCTCC...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATGGAGAAGAGACAGGCTaGCCATCTCTCTGCCACTCG +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHGEETG*PSLCHS
Trigger: CGAGTGGCAGAGAGATGGGCAGCCTGTCTCTTCTCC...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCGCTGGTCTCGGTCCTaGCCATTGAAAGCGACACAG +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSRWSRS*PLKATQ
Trigger: CTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCG...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCACAAAGCTGGGCCTaGAGGATCAAATCACAGTTG +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPQSWA*RIKSQL
Trigger: CAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCACAAAGCTGGGCCTaGAGGATCAAATCACAGTTG +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPQSWA*RIKSQL
Trigger: CAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTTGGAGTAATACTCATTaGCACAAAGCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPWSNTH*HKAGPA
Trigger: TGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCAAAGTTATTGGCATTaGCATGGCAGCCGCCATACC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFQSYWH*HGSRHT
Trigger: GGTATGGCGGCTGCCATGGCAATGCCAATAACTTTG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTCAAAGTTATTGGCATTaGCATGGCAGCCGCCATACC +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSQSYWH*HGSRHT
Trigger: GGTATGGCGGCTGCCATGGCAATGCCAATAACTTTG...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCAGGCTGTTGGTCTTaGCGCCAGAGACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPGCWS*RQRPPE
Trigger: TTCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAACCAGGCTGTTGGTCTTaGCGCCAGAGACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEPGCWS*RQRPPE
Trigger: TTCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGG...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCCTGGACCCAAGCTCCTaGCCCCATGGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSILDPSS*PHGHSP
Trigger: TGGAGAATGGCCATGGGGGCAGGAGCTTGGGTCCAG...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCGAGGGCTCCACACCTaGCAAGCTAATCCTGTAGGA +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSRGLHT*QANPVG
Trigger: TCCTACAGGATTAGCTTGGCAGGTGTGGAGCCCTCG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCCCTGTTACTGCATTaGCCACAACCCTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLSLLLH*PQPFPI
Trigger: AATGGGGAAGGGTTGTGGGCAATGCAGTAACAGGGA...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATCCATTTCCCTGTTACTaGATTGCCCACAACCCTTCC +
Preference number: 4 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNPFPCY*IAHNPS
Trigger: GGAAGGGTTGTGGGCAATGCAGTAACAGGGAAATGG...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAAGCCGCATCTCAGCCTaGGGGAGACGCATTGGGTTA +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAESRISA*GRRIGL
Trigger: TAACCCAATGCGTCTCCCGCAGGCTGAGATGCGGCT...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555445.5
CDS-3UTR CCA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTACTTGTCCTCCTGCTTaGACGAGTCCAGCTCGTGAT +
Preference number: 4 (lower is better)
Translates to: SLILAQNTSLIQQDLACPTCPPA*TSPARD
Trigger: ATCACGAGCTGGACTCGTCCAAGCAGGAGGACAAGT...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAGGACCGGCTGCAGTaGCCACGTTGTCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAEDRLQ*PRCHSN
Trigger: GTTGCTATGACAACGTGGCCACTGCAGCCGGTCCTC...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCTCAGAGGAGATGGGCTaGCCATCTTTCTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVSEEMG*PSFCQA
Trigger: TGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGA...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGTCTGCCTGCAGGGGGTaGATGATCAGGGATCCGTCG +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLSACRG*MIRDPS
Trigger: CGACGGATCCCTGATCATCCACCCCCTGCAGGCAGA...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTACCCGGGGCTGGTTCTaGTCCAAACGCAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTATRGWF*SKRSLF
Trigger: AAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGT...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACAGGCCGTATCACCCTCTaGCACTGTCACAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTGRITL*HCHSRG
Trigger: CCCCCTACTGTGACAGTGCCAGAGGGTGATACGGCC...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGGTGCCATCTGGGGACTaGTGGACACGGTGGCCATCA +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLVPSGD*WTRWPS
Trigger: TGATGGCCACCGTGTCCACCAGTCCCCAGATGGCAC...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACAACAGTTGGCCAGCTCTaGCTGGTCGACGCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTTVGQL*LVDAVP
Trigger: AGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGT...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTGGATCAAATCACAGTTaGCCAGCTCTGGCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLGSNHS*PALAGR
Trigger: TCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCC...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGGAAACGTGAACAGCTaGCACAGCAGAAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIGNVNS*HSRSWS
Trigger: ACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTATCCCTACTGCCAGATaGGCTGAGCGTGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCIPTAR*AEREAG
Trigger: TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGAT...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCAGAAGCGGTTACATTaGCCCACAGAGGCAACGAAG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIQKRLH*PTEATK
Trigger: CTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCAGAAGCGGTTACATTaGCCCACAGAGGCAACGAAG +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFQKRLH*PTEATK
Trigger: CTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTG...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTTATTGGCATTGCCATaGCAGCCGCCATACCAGAAG +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLLLALP*QPPYQK
Trigger: CTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAA...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTATTGGCATTGCCATaGCAGCCGCCATACCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELALLALP*QPPYQK
Trigger: CTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCGAGGCAAAGTTATTaGCATTGCCATGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSPRQSY*HCHGSR
Trigger: GCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCGCCCCTGTCCTGTGCTaGCTGGGTTCCTGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCAPVLC*LGSCSP
Trigger: AGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGC...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGCCAGATTTGCATGTTaGCCTCAGGAGGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIARFAC*PQEGFK
Trigger: CTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTGCCAGATTTGCATGTTaGCCTCAGGAGGGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLARFAC*PQEGFK
Trigger: CTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGC...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCTGTACAGAGCAGGCTaGTCAGCTTTACACAGGTGT +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESLYRAG*SALHRC
Trigger: ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCAAGTGGAAAGGGACTTaGAAGCTCATAGAATCCATG +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSKWKGT*KLIESM
Trigger: CATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTT...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGCACTCACCCGTGATGTaGTTTGTCCCTTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: YELFWTGAGTSLHPYCQMHSPVM*FVPFPA
Trigger: GGCTGGAAAAGGGACAAACCACATCACGGGTGAGTG...CATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
3UTR CAA 72 bp CACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATaGTCACTGTACAGAGCAGGCTGGTCAGCTTTACAC +
Preference number: 4 (lower is better)
Translates to: HRFLLKEERGSS*SLYRAGWSALH
Trigger: GTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGACCTCCTGGGGGAGATaGCAGGGCTGCGTGTTACAA +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLTSWGR*QGCVLQ
Trigger: TTGTAACACGCAGCCCTGTCATCTCCCCCAGGAGGT...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR TCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGCCCGCAAGTTGTAAATaGGCAGCGTGCCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLPASCK*AACHLG
Trigger: CCCCAGATGGCACGCTGCTCATTTACAACTTGCGGG...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTAGATGCAAACACTGCTaGAGGCTACAGAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLRCKHC*RLQREA
Trigger: AGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCT...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCAGATGCAAACACTGCTaGAGGCTACAGAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRCKHC*RLQREA
Trigger: AGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCT...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCAGCTACTCAGAAGGCTaGCACAGGAGAATCAAGAAC +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESSYSEG*HRRIKN
Trigger: GTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCT...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTAGCTACTCAGAAGGCTaGCACAGGAGAATCAAGAAC +
Preference number: 4 (lower is better)
Translates to: PSPMNYFGLGLELAFIPTSYSEG*HRRIKN
Trigger: GTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCT...AGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR TCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGAGAGAGACTAGAGCAATaGACCATCGCTGATTTTAGC +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRERLEQ*TIADFS
Trigger: GCTAAAATCAGCGATGGTTCATTGCTCTAGTCTCTC...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTACACAGGTGTCAGATaGACCGTCACAGCCAGATTT +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLYTGVR*TVTARF
Trigger: AAATCTGGCTGTGACGGTTCATCTGACACCTGTGTA...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGAGTATCACTCACCCGTaGTGTGGTTTGTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETSITHP*CGLSLF
Trigger: GAAAAGGGACAAACCACATCACGGGTGAGTGATACT...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACATGAGTAGAGAAGACTaGGAAGTATCACTCACCCGT +
Preference number: 4 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHMSRED*EVSLTR
Trigger: ACGGGTGAGTGATACTTCTCAGTCTTCTCTACTCAT...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACACCTCATGGTCGATGGTaGAGAACACCAGGCGGGACT +
Preference number: 4 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTPHGRW*RTPGGT
Trigger: AGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGG...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCACAGGCTTGGAGTGCTaGAGGCTCCCGCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCTGLEC*RLPQWL
Trigger: CAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGT...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTCACCATACGACTTTGTaGAGCCAGCGTGATGGGGCC +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCHHTTL*SQRDGA
Trigger: GGCCCCATCACGCTGGCTGCACAAAGTCGTATGGTG...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTGGAGTAATACTCATTaGCACAAAGCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAWSNTH*HKAGPA
Trigger: TGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCTGCTCATGCACTCTTaGTCCGAGGCAAAGTTATTG +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELALLMHS*SEAKLL
Trigger: CAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGAATGCTGTTAACCCTCTaGACCAGATTTAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRMLLTL*TRFRAD
Trigger: GTCAGCTCTAAATCTGGTGCAGAGGGTTAACAGCAT...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCAACAACCCTTCCCCATTaGTATCCTCATCCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSTTLPH*YPHPAN
Trigger: ATTAGCAGGATGAGGATAGCAATGGGGAAGGGTTGT...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCAGAAGTTCTCCCCCTTaGGAATGCAGTTCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELARSSPP*ECSSVH
Trigger: GTGAACTGAACTGCATTCCCAAGGGGGAGAACTTCT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTAGAAGTTCTCCCCCTTaGGAATGCAGTTCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: FQKITPFASQREEAKSPSRSSPP*ECSSVH
Trigger: GTGAACTGAACTGCATTCCCAAGGGGGAGAACTTCT...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCCGGGGTTGGGCTCCTaGCTGATGAGCTCGATGACC +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCPGLGS*LMSSMT
Trigger: GGTCATCGAGCTCATCAGCCAGGAGCCCAACCCCGG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCCCACCACTGGCCTCTaGAGTCTGAGGCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCPTTGL*SLRQGT
Trigger: AGTCCCCTGCCTCAGACTCCAGAGGCCAGTGGTGGG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp CATCTATTCCATTTTGCCAACAAGGGTTATGCTGTTAACCCTCTGCACCAGATTGAGGACCGGCTGCAGTaGCCACGTTGTCATAGCAAC +
Preference number: 4 (lower is better)
Translates to: HLFHFANKGYAVNPLHQIEDRLQ*PRCHSN
Trigger: GTTGCTATGACAACGTGGCCACTGCAGCCGGTCCTC...AATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGAATAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAATCAGAGGAGATGGGCTaGCCATCTTTCTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAESEEMG*PSFCQA
Trigger: TGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGA...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCTATGATGCGAAGTTaGATCTTCTGGGAGTCGCGG +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSPMMRS*IFWESR
Trigger: CCGCGACTCCCAGAAGATCCAACTTCGCATCATAGG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGACCCGGGGCTGGTTCTaGTCCAAACGCAGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLTRGWF*SKRSLF
Trigger: AAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGT...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCACACACAATAGCCTaGCCGTATCACCCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPHTIA*PYHPLA
Trigger: TGCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCTTGGCCAGCTCTGGCTaGTCGACGCAGTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCLASSG*STQSLP
Trigger: TGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAA...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCTCATTGCCACAAAGCTaGGCCTGCAGGATCAAATCA +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESSLPQS*ACRIKS
Trigger: TGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGA...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTGGCACAGCAGAAGCTaGAGTAATACTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFWHSRS*SNTHCH
Trigger: GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGGGAAACGTGAACAGCTaGCACAGCAGAAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQGNVNS*HSRSWS
Trigger: ACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCC...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCCTATGAACTATTTTaGACTGGGGCTGGAACTAGC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPYELF*TGAGTS
Trigger: GCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCCTATGAACTATTTTaGACTGGGGCTGGAACTAGC +
Preference number: 4 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPYELF*TGAGTS
Trigger: GCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCCCTATGAACTATTTTaGACTGGGGCTGGAACTAGC +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLPYELF*TGAGTS
Trigger: GCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCAGGCTAAACACTGGGTaGGTTTTTGAAAGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: QKADTGESRTQETEVAVSRLNTG*VFERAN
Trigger: ATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCT...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCAGAGAAGCTGGTAACTaGCTGCCGTTGAGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPREAGN*LPLRLN
Trigger: GTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCT...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGCAGAAGCGGTTACATTaGCCCACAGAGGCAACGAAG +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQQKRLH*PTEATK
Trigger: CTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTG...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTTTATTGGCATTGCCATaGCAGCCGCCATACCAGAAG +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFLLALP*QPPYQK
Trigger: CTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAA...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAACCATGGAGAGATCCCTaGCAGCTGCTCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEPWRDP*QLLMHS
Trigger: AGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGG...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATCCATGGAGAGATCCCTaGCAGCTGCTCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHPWRDP*QLLMHS
Trigger: AGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGG...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCTGTCCTGTGCTGGCTaGGTTCCTGCTCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCLSCAG*VPARLQ
Trigger: CTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCCTGTACAGAGCAGGCTaGTCAGCTTTACACAGGTGT +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPLYRAG*SALHRC
Trigger: ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAG...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR CAA 72 bp CCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTaGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PVMWFVPFPASV*VIKVTFQSFGP
Trigger: GGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATGTCACCCCCTATaGTGCGAAGTTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSPCHPL*CEVGSS
Trigger: AGAAGATCCAACTTCGCATCATAGGGGGTGACATGG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTCTCGGTCCTGCCCATTaGAAGCGACACAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCLGPAH*KRHRCR
Trigger: TCTACACCTGTGTCGCTTTCAATGGGCAGGACCGAG...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAACGTTCCTGGACCACCTaGTGTTCACACTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAERSWTT*CSHFLL
Trigger: CAGGAGAAAGTGTGAACATCAGGTGGTCCAGGAACG...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCGTTCCTGGACCACCTaGTGTTCACACTTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCRSWTT*CSHFLL
Trigger: CAGGAGAAAGTGTGAACATCAGGTGGTCCAGGAACG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTTTCTCCCTAGCCCTATaGACTATTTTGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSFSLAL*TILDWG
Trigger: GCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAA...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACTTCTCCCTAGCCCTATaGACTATTTTGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYFSLAL*TILDWG
Trigger: GCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAA...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCAGATGCAAACACTGCTaGAGGCTACAGAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIRCKHC*RLQREA
Trigger: AGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGAGCTTTAAAACACATTaGTGGGCTGGGCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQSFKTH*WAGHSG
Trigger: GCCACTGTGCCCAGCCCATCAATGTGTTTTAAAGCT...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp AGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGAAGTCCTGAGAGATaGAGAATGTTGTCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: SPMNYFGLGLELAFIPTARSPER*RMLSSN
Trigger: GTTGGAAGACAACATTCTTCATCTCTCAGGACTTCT...GGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
CDS-3UTR TCA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTAAAACCAGCCATAAGTaGACATGGATGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCKTSHK*TWMLFN
Trigger: ATTGAAGAGCATCCATGTTCACTTATGGCTGGTTTT...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCTGAGATCGCGCCATTaGCCTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCLRSRH*PPAWAT
Trigger: TGTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCTGCTCATGCACTCTTaGTCCGAGGCAAAGTTATTG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFILLMHS*SEAKLL
Trigger: CAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACAGAAGTTCTCCCCCTTaGGAATGCAGTTCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNRSSPP*ECSSVH
Trigger: GTGAACTGAACTGCATTCCCAAGGGGGAGAACTTCT...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGAGCACGCTGCGGTATaGAGCAAAGAACCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEEHAAV*SKEPLS
Trigger: TGAAAGGGGTTCTTTGCTCCATACCGCAGCGTGCTC...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCGCATCCAGGGGTTGCTaGCAGGGGTGTGCACATCCT +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCASRGC*QGCAHP
Trigger: AGGATGTGCACACCCCTGCCAGCAACCCCTGGATGC...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTTCAGAGGAGATGGGCTaGCCATCTTTCTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCSEEMG*PSFCQA
Trigger: TGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGA...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGCCATCAGGCTGCAGCTaGTGTCTGGGAGAAGAGACA +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLPSGCS*CLGEET
Trigger: TGTCTCTTCTCCCAGACACCAGCTGCAGCCTGATGG...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCAGCTGGACCCATCGCTaGTCTCGGTCCTGCCCATTG +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCSWTHR*SRSCPL
Trigger: CAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCT...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCCCAGAACTCTGAGCTaGACCCATCGCTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCPRTLS*THRWSR
Trigger: CCGAGACCAGCGATGGGTCCAGCTCAGAGTTCTGGG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGATCAAATCACAGTTaGCCAGCTCTGGCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEGSNHS*PALAGR
Trigger: TCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCC...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTCATTGCCACAAAGCTaGGCCTGCAGGATCAAATCA +
Preference number: 4 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPSLPQS*ACRIKS
Trigger: TGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGA...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTCATTGCCACAAAGCTaGGCCTGCAGGATCAAATCA +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFISLPQS*ACRIKS
Trigger: TGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTTGGCACAGCAGAAGCTaGAGTAATACTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFWHSRS*SNTHCH
Trigger: GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCA...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTTGGCACAGCAGAAGCTaGAGTAATACTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLWHSRS*SNTHCH
Trigger: GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCA...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCCTATGAACTATTTTaGACTGGGGCTGGAACTAGC +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPYELF*TGAGTS
Trigger: GCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACAGAGAAGCTGGTAACTaGCTGCCGTTGAGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYREAGN*LPLRLN
Trigger: GTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCT...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGAGAGAAGCTGGTAACTaGCTGCCGTTGAGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQREAGN*LPLRLN
Trigger: GTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCT...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCAGAGAAGCTGGTAACTaGCTGCCGTTGAGGCTAAAC +
Preference number: 4 (lower is better)
Translates to: PFPASVLVIKVTFQSFGPREAGN*LPLRLN
Trigger: GTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCT...GGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTCCGAGGCAAAGTTATTaGCATTGCCATGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCPRQSY*HCHGSR
Trigger: GCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGG...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTCCATGGAGAGATCCCTaGCAGCTGCTCATGCACTCT +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCPWRDP*QLLMHS
Trigger: AGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGG...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCCTGTACAGAGCAGGCTaGTCAGCTTTACACAGGTGT +
Preference number: 4 (lower is better)
Translates to: PFPASVLVIKVTFQSFGPLYRAG*SALHRC
Trigger: ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAG...GGGACCAAAGCTCTGAAAGGTGACTTTTATTACCAACACACTGGCTGGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGAAAGTGGAAAGGGACTTaGAAGCTCATAGAATCCATG +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRKWKGT*KLIESM
Trigger: CATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTT...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCACTCACCCGTGATGTaGTTTGTCCCTTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAHSPVM*FVPFPA
Trigger: GGCTGGAAAAGGGACAAACCACATCACGGGTGAGTG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACACACCCATGGGAACTATaGGGATCTGGTTGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTHPWEL*GSGCSL
Trigger: GAGGCTACAACCAGATCCTCATAGTTCCCATGGGTG...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644200.2
CDS-3UTR TCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCATGTCACCCCCTATaGTGCGAAGTTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPCHPL*CEVGSS
Trigger: AGAAGATCCAACTTCGCATCATAGGGGGTGACATGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCCCGCAAGTTGTAAATaGGCAGCGTGCCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCPASCK*AACHLG
Trigger: CCCCAGATGGCACGCTGCTCATTTACAACTTGCGGG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR TCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAATTCTCCCTAGCCCTATaGACTATTTTGGACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEFSLAL*TILDWG
Trigger: GCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAA...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGTACACAGGTGTCAGATaGACCGTCACAGCCAGATTT +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQYTGVR*TVTARF
Trigger: AAATCTGGCTGTGACGGTTCATCTGACACCTGTGTA...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTGCTGTTTTTAATGACTaGCAGTCTGATTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QMNRHSQICMLASGGLQGAVFND*QSDLSL
Trigger: CAAAGACAAATCAGACTGTCAGTCATTAAAAACAGC...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAAGAAGTCCTGAGAGATaGAGAATGTTGTCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERRSPER*RMLSSN
Trigger: GTTGGAAGACAACATTCTTCATCTCTCAGGACTTCT...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCAGAAGTCCTGAGAGATaGAGAATGTTGTCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRSPER*RMLSSN
Trigger: GTTGGAAGACAACATTCTTCATCTCTCAGGACTTCT...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACAGTATCACTCACCCGTaGTGTGGTTTGTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYSITHP*CGLSLF
Trigger: GAAAAGGGACAAACCACATCACGGGTGAGTGATACT...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGAAAACCAGCCATAAGTaGACATGGATGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQKTSHK*TWMLFN
Trigger: ATTGAAGAGCATCCATGTTCACTTATGGCTGGTTTT...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCGCTGGTCTCGGTCCTaGCCATTGAAAGCGACACAG +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCRWSRS*PLKATQ
Trigger: CTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCACAAAGCTGGGCCTaGAGGATCAAATCACAGTTG +
Preference number: 4 (lower is better)
Translates to: LLFLKTAACGYVRDANTAPQSWA*RIKSQL
Trigger: CAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCCACAAAGCTGGGCCTaGAGGATCAAATCACAGTTG +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSPQSWA*RIKSQL
Trigger: CAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGG...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTCCACAAAGCTGGGCCTaGAGGATCAAATCACAGTTG +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCPQSWA*RIKSQL
Trigger: CAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGG...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTTGGAGTAATACTCATTaGCACAAAGCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSWSNTH*HKAGPA
Trigger: TGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAACAAAGTTATTGGCATTaGCATGGCAGCCGCCATACC +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAEQSYWH*HGSRHT
Trigger: GGTATGGCGGCTGCCATGGCAATGCCAATAACTTTG...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCTGCTCATGCACTCTTaGTCCGAGGCAAAGTTATTG +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSLLMHS*SEAKLL
Trigger: CAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACATGCTGTTAACCCTCTaGACCAGATTTAGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNMLLTL*TRFRAD
Trigger: GTCAGCTCTAAATCTGGTGCAGAGGGTTAACAGCAT...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCAGATAACAGTGCTAACTaGAGCTGTTTCATCCCAAAT +
Preference number: 4 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSDNSAN*SCFIPN
Trigger: ATTTGGGATGAAACAGCTGCAGTTAGCACTGTTATC...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGACAACCCTTCCCCATTaGTATCCTCATCCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWTTLPH*YPHPAN
Trigger: ATTAGCAGGATGAGGATAGCAATGGGGAAGGGTTGT...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR GCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAATCCCTGTTACTGCATTaGCCACAACCCTTCCCCATT +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAESLLLH*PQPFPI
Trigger: AATGGGGAAGGGTTGTGGGCAATGCAGTAACAGGGA...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTCCATTTCCCTGTTACTaGATTGCCCACAACCCTTCC +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCPFPCY*IAHNPS
Trigger: GGAAGGGTTGTGGGCAATGCAGTAACAGGGAAATGG...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CATCTATTCCATTTTGCCAACAAGGGTTATGCTGTTAACCCTCTGCACCAGATTGGATCAAATCACAGTTaGCCAGCTCTGGCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: HLFHFANKGYAVNPLHQIGSNHS*PALAGR
Trigger: TCGACCAGCCAGAGCTGGCCAACTGTGATTTGATCC...AATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGAATAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTTCATTGCCACAAAGCTaGGCCTGCAGGATCAAATCA +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSSLPQS*ACRIKS
Trigger: TGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGA...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCTATGAACTATTTTaGACTGGGGCTGGAACTAGC +
Preference number: 4 (lower is better)
Translates to: NVFQKITPFASQREEAKSPYELF*TGAGTS
Trigger: GCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGAAGGCTAAACACTGGGTaGGTTTTTGAAAGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRRLNTG*VFERAN
Trigger: ATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCT...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTGAAAACAGCAGCCTGTaGTTATGTCAGAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: EDNSLCQPERGSQESIFLENSSL*LCQRCK
Trigger: TTTGCATCTCTGACATAACCACAGGCTGCTGTTTTC...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTCAGAAGCGGTTACATTaGCCCACAGAGGCAACGAAG +
Preference number: 4 (lower is better)
Translates to: SFLCPGITFATRQSSERFQKRLH*PTEATK
Trigger: CTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTG...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGCAGAAGCGGTTACATTaGCCCACAGAGGCAACGAAG +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLQKRLH*PTEATK
Trigger: CTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTG...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAATTATTGGCATTGCCATaGCAGCCGCCATACCAGAAG +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAELLALP*QPPYQK
Trigger: CTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAA...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTTATTGGCATTGCCATaGCAGCCGCCATACCAGAAG +
Preference number: 4 (lower is better)
Translates to: QQTFCFTDSYLRKRGAPHLLALP*QPPYQK
Trigger: CTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAA...ATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTCACTCACCCGTGATGTaGTTTGTCCCTTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCHSPVM*FVPFPA
Trigger: GGCTGGAAAAGGGACAAACCACATCACGGGTGAGTG...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACACCATGTCACCCCCTATaGTGCGAAGTTGGATCTTCT +
Preference number: 4 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTPCHPL*CEVGSS
Trigger: AGAAGATCCAACTTCGCATCATAGGGGGTGACATGG...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GTAATAAAAGTCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTAGATGCAAACACTGCTaGAGGCTACAGAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: VIKVTFQSFGPCNARLSCRCKHC*RLQREA
Trigger: AGCTTCTCTCTGTAGCCTTCAGCAGTGTTTGCATCT...ACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGACTTTTATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCAGCTTTAAAACACATTaGTGGGCTGGGCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSISFKTH*WAGHSG
Trigger: GCCACTGTGCCCAGCCCATCAATGTGTTTTAAAGCT...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACAAGCTTTAAAACACATTaGTGGGCTGGGCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTSFKTH*WAGHSG
Trigger: GCCACTGTGCCCAGCCCATCAATGTGTTTTAAAGCT...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGTCCCAAATCCCTATTTaGGGTCTTAACATCTATTCC +
Preference number: 4 (lower is better)
Translates to: VILATQKADTGESRTQETSQIPI*GLNIYS
Trigger: GGAATAGATGTTAAGACCTCAAATAGGGATTTGGGA...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCAAAACCAGCCATAAGTaGACATGGATGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAKTSHK*TWMLFN
Trigger: ATTGAAGAGCATCCATGTTCACTTATGGCTGGTTTT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CATCTATTCCATTTTGCCAACAAGGGTTATGCTGTTAACCCTCTGCACCAGATTCCACAAAGCTGGGCCTaGAGGATCAAATCACAGTTG +
Preference number: 4 (lower is better)
Translates to: HLFHFANKGYAVNPLHQIPQSWA*RIKSQL
Trigger: CAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGG...AATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGAATAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGCAAAGTTATTGGCATTaGCATGGCAGCCGCCATACC +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLQSYWH*HGSRHT
Trigger: GGTATGGCGGCTGCCATGGCAATGCCAATAACTTTG...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGATAACAGTGCTAACTaGAGCTGTTTCATCCCAAAT +
Preference number: 4 (lower is better)
Translates to: MNYFGLGLELAFIPTARWDNSAN*SCFIPN
Trigger: ATTTGGGATGAAACAGCTGCAGTTAGCACTGTTATC...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
CDS-3UTR GCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCCCATTTCCCTGTTACTaGATTGCCCACAACCCTTCC +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSIPFPCY*IAHNPS
Trigger: GGAAGGGTTGTGGGCAATGCAGTAACAGGGAAATGG...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAAGAAGTTCTCCCCCTTaGGAATGCAGTTCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LFLKTAACGYVRDANTAERSSPP*ECSSVH
Trigger: GTGAACTGAACTGCATTCCCAAGGGGGAGAACTTCT...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGGCACAGCAGAAGCTaGAGTAATACTCATTGCCAC +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCWHSRS*SNTHCH
Trigger: GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCA...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCCCTATGAACTATTTTaGACTGGGGCTGGAACTAGC +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSPYELF*TGAGTS
Trigger: GCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCAGGCTAAACACTGGGTaGGTTTTTGAAAGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: SSFLPSPMNYFGLGLELARLNTG*VFERAN
Trigger: ATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGAGGCTAAACACTGGGTaGGTTTTTGAAAGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: MNYFGLGLELAFIPTARWRLNTG*VFERAN
Trigger: ATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCT...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTGAAAACAGCAGCCTGTaGTTATGTCAGAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFENSSL*LCQRCK
Trigger: TTTGCATCTCTGACATAACCACAGGCTGCTGTTTTC...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTTTATTGGCATTGCCATaGCAGCCGCCATACCAGAAG +
Preference number: 4 (lower is better)
Translates to: SFLCPGITFATRQSSERFLLALP*QPPYQK
Trigger: CTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAA...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CCA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACAAGTGGAAAGGGACTTaGAAGCTCATAGAATCCATG +
Preference number: 4 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNKWKGT*KLIESM
Trigger: CATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTT...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCGAGAGACTAGAGCAATaGACCATCGCTGATTTTAGC +
Preference number: 4 (lower is better)
Translates to: IALLENSSLWLCQRCKHCERLEQ*TIADFS
Trigger: GCTAAAATCAGCGATGGTTCATTGCTCTAGTCTCTC...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTTCCCAAATCCCTATTTaGGGTCTTAACATCTATTCC +
Preference number: 4 (lower is better)
Translates to: SLILAQNTSLIQQDLACPSQIPI*GLNIYS
Trigger: GGAATAGATGTTAAGACCTCAAATAGGGATTTGGGA...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTTCCCAAATCCCTATTTaGGGTCTTAACATCTATTCC +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFSQIPI*GLNIYS
Trigger: GGAATAGATGTTAAGACCTCAAATAGGGATTTGGGA...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTGTTTTTAATGACTaGCAGTCTGATTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERAVFND*QSDLSL
Trigger: CAAAGACAAATCAGACTGTCAGTCATTAAAAACAGC...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTAGTATCACTCACCCGTaGTGTGGTTTGTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCSITHP*CGLSLF
Trigger: GAAAAGGGACAAACCACATCACGGGTGAGTGATACT...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp ATCTCCCTGCCCAGCTTTAAATTAAGTGGAACCCTGACAGCTAGCTTTAAAACATGGAGTAATACTCATTaGCACAAAGCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ISLPSFKLSGTLTASFKTWSNTH*HKAGPA
Trigger: TGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA...TGTTTTAAAGCTAGCTGTCAGGGTTCCACTTAATTTAAAGCTGGGCAGGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGTGGAGTAATACTCATTaGCACAAAGCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLWSNTH*HKAGPA
Trigger: TGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTCTGCTCATGCACTCTTaGTCCGAGGCAAAGTTATTG +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCLLMHS*SEAKLL
Trigger: CAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAG...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR GCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGATAACAGTGCTAACTaGAGCTGTTTCATCCCAAAT +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIDNSAN*SCFIPN
Trigger: ATTTGGGATGAAACAGCTGCAGTTAGCACTGTTATC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTACAACCCTTCCCCATTaGTATCCTCATCCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: PFPIAILILLMLFLMTDSTTLPH*YPHPAN
Trigger: ATTAGCAGGATGAGGATAGCAATGGGGAAGGGTTGT...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCGAGCACGCTGCGGTATaGAGCAAAGAACCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCEHAAV*SKEPLS
Trigger: TGAAAGGGGTTCTTTGCTCCATACCGCAGCGTGCTC...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CCA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGTCATTGCCACAAAGCTaGGCCTGCAGGATCAAATCA +
Preference number: 4 (lower is better)
Translates to: FPIAILILLMLFLMTDSLSLPQS*ACRIKS
Trigger: TGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGA...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTAGGCTAAACACTGGGTaGGTTTTTGAAAGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: KITPFASQREEAKSPSSFRLNTG*VFERAN
Trigger: ATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCT...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACGAAAACAGCAGCCTGTaGTTATGTCAGAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYENSSL*LCQRCK
Trigger: TTTGCATCTCTGACATAACCACAGGCTGCTGTTTTC...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCGAAAACAGCAGCCTGTaGTTATGTCAGAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVENSSL*LCQRCK
Trigger: TTTGCATCTCTGACATAACCACAGGCTGCTGTTTTC...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGCTGTTTTTAATGACTaGCAGTCTGATTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIAVFND*QSDLSL
Trigger: CAAAGACAAATCAGACTGTCAGTCATTAAAAACAGC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACGATAACAGTGCTAACTaGAGCTGTTTCATCCCAAAT +
Preference number: 4 (lower is better)
Translates to: LKTAACGYVRDANTAEGYDNSAN*SCFIPN
Trigger: ATTTGGGATGAAACAGCTGCAGTTAGCACTGTTATC...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCACAACCCTTCCCCATTaGTATCCTCATCCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSITTLPH*YPHPAN
Trigger: ATTAGCAGGATGAGGATAGCAATGGGGAAGGGTTGT...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CCA 90 bp CTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGCTAATGTATTCCAGAGGCTAAACACTGGGTaGGTTTTTGAAAGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: LPLRLNTGWVFERANVFQRLNTG*VFERAN
Trigger: ATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCT...CTGGAATACATTAGCTCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR GCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCTGGAGTAATACTCATTaGCACAAAGCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCWSNTH*HKAGPA
Trigger: TGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTTCCCAAATCCCTATTTaGGGTCTTAACATCTATTCC +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCSQIPI*GLNIYS
Trigger: GGAATAGATGTTAAGACCTCAAATAGGGATTTGGGA...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCATGAGTAGAGAAGACTaGGAAGTATCACTCACCCGT +
Preference number: 4 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCMSRED*EVSLTR
Trigger: ACGGGTGAGTGATACTTCTCAGTCTTCTCTACTCAT...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTAAAACCAGCCATAAGTaGACATGGATGCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCKTSHK*TWMLFN
Trigger: ATTGAAGAGCATCCATGTTCACTTATGGCTGGTTTT...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR TCA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCGCTGTTTTTAATGACTaGCAGTCTGATTTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: KVERDLEAHRIHASSFSIAVFND*QSDLSL
Trigger: CAAAGACAAATCAGACTGTCAGTCATTAAAAACAGC...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR CAA 72 bp ATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTaGGCATGCCCTTTAGAAAACAAACAGGTGTTAACT +
Preference number: 4 (lower is better)
Translates to: ILAQNTSLIQQD*ACPLENKQVLT
Trigger: AGTTAACACCTGTTTGTTTTCTAAAGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
3UTR CAA 72 bp TTGGCATGCCCTTTAGAAAACAAACAGGTGTTAACTTaGAAATCATTACACATCTCCCTGCCCAGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LACPLENKQVLT*KSLHISLPSFK
Trigger: TTTAAAGCTGGGCAGGGAGATGTGTAATGATTTCAAAGTTAACACCTGTTTGTTTTCTAAAGGGCATGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS CCA 90 bp AGCAGCGGCACGAGCAGGAGCAGCCGCATCTCAGCCTGTCTTCGCTaGCGCCGGGAGGCTGCAGCCAGGGCCGCTCCGTCGGTGCCCGCC +
Preference number: 5 (lower is better)
Translates to: SSGTSRSSRISACLR*RREAAARAAPSVPA
Trigger: GGCGGGCACCGACGGAGCGGCCCTGGCTGCAGCCTCCCGGCGCCAGCGAAGACAGGCTGAGATGCGGCTGCTCCTGCTCGTGCCGCTGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS CCA 90 bp CGGCCCGGGGCTCCCGCAGCTGTCCTGGGCGCGGGCGAGAGTGTGTaGGCGCGTCTCTCCCTATGGCCCACAGGTGACCAGGAGACCCGC +
Preference number: 5 (lower is better)
Translates to: RPGAPAAVLGAGESV*ARLSLWPTGDQETR
Trigger: GCGGGTCTCCTGGTCACCTGTGGGCCATAGGGAGAGACGCGCCCACACACTCTCGCCCGCGCCCAGGACAGCTGCGGGAGCCCCGGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS TCA 90 bp GCGGGACTGGTGACCTCCGCCACACTCCGCGCTGCAGTCACTCCATaGGCCGTGGCTCCAGCTGAAGCCGGGGCTGGGGCGGCGCAGGGG +
Preference number: 5 (lower is better)
Translates to: AGLVTSATLRAAVTP*AVAPAEAGAGAAQG
Trigger: CCCCTGCGCCGCCCCAGCCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTGACTGCAGCGCGGAGTGTGGCGGAGGTCACCAGTCCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTGGGCTGGGCGGCCCAGCAGCCCCCGCTaGGCCAAAGTCCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: WPALAGRRSPCQGPWAGRPSSPR*AKVLSW
Trigger: CCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCTGGG...CCGCCCAGCCCAGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS CCA 90 bp TCCACTGGCTCCAGGGTCCCCAGGTGTCACTCTGCCGCCTCACCTTaGGAGCCGAGGACCCGGGCGCTGGAGCCAGCAGCAGCGGCACGA +
Preference number: 5 (lower is better)
Translates to: STGSRVPRCHSAASP*EPRTRALEPAAAAR
Trigger: TCGTGCCGCTGCTGCTGGCTCCAGCGCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGGACCCTGGAGCCAGTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS TCA 90 bp CGCGGGCGAGAGTGTGTGGGCGCGTCTCTCCCTATGGCCCACAGGTaGCCAGGAGACCCGCAACAGGACAGCCGGGTGCGCCTCGGTGCA +
Preference number: 5 (lower is better)
Translates to: RGRECVGASLPMAHR*PGDPQQDSRVRLGA
Trigger: TGCACCGAGGCGCACCCGGCTGTCCTGTTGCGGGTCTCCTGGTCACCTGTGGGCCATAGGGAGAGACGCGCCCACACACTCTCGCCCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS CCA 90 bp GCTGTCCTGGGCGCGGGCGAGAGTGTGTGGGCGCGTCTCTCCCTATaGCCCACAGGTGACCAGGAGACCCGCAACAGGACAGCCGGGTGC +
Preference number: 5 (lower is better)
Translates to: AVLGAGESVWARLSL*PTGDQETRNRTAGC
Trigger: GCACCCGGCTGTCCTGTTGCGGGTCTCCTGGTCACCTGTGGGCCATAGGGAGAGACGCGCCCACACACTCTCGCCCGCGCCCAGGACAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS GCA 90 bp CAGCCTCCTCCACGGCCTCCTGGATGCCGGCCCCGTCAGACGAGATaGAGTACACGGAGCGGGACTGGGAGCCTCCTCCACAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QPPPRPPGCRPRQTR*STRSGTGSLLHRRL
Trigger: CAGCCTCCTGTGGAGGAGGCTCCCAGTCCCGCTCCGTGTACTGCATCTCGTCTGACGGGGCCGGCATCCAGGAGGCCGTGGAGGAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 90 bp CGGCCCCTGTCCTGTGCTGGCTGGGTTCCTGCTCGCCTGCAGGACTaGTGCCGCCACCATCCGTGTGGGTGCTCCTTCCAGAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: RPLSCAGWVPARLQD*CRHHPCGCSFQKPQ
Trigger: CTGGGGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS GCA 90 bp CTGCACCGCGGCCCCTGTCCTGTGCTGGCTGGGTTCCTGCTCGCCTaGAGGACTGCTGCCGCCACCATCCGTGTGGGTGCTCCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: LHRGPCPVLAGFLLA*RTAAATIRVGAPSR
Trigger: TCTGGAAGGAGCACCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGCCGCGGTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS GCA 90 bp GGCTTTCTCTGCACCGCGGCCCCTGTCCTGTGCTGGCTGGGTTCCTaGTCGCCTGCAGGACTGCTGCCGCCACCATCCGTGTGGGTGCTC +
Preference number: 5 (lower is better)
Translates to: GFLCTAAPVLCWLGS*SPAGLLPPPSVWVL
Trigger: GAGCACCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGCCGCGGTGCAGAGAAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS GCA 90 bp CCACCAGAAGGCCAGGGCTTTCTCTGCACCGCGGCCCCTGTCCTGTaGTGGCTGGGTTCCTGCTCGCCTGCAGGACTGCTGCCGCCACCA +
Preference number: 5 (lower is better)
Translates to: PPEGQGFLCTAAPVL*WLGSCSPAGLLPPP
Trigger: TGGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGCCGCGGTGCAGAGAAAGCCCTGGCCTTCTGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS CCA 90 bp GCTCCGGGCTCCAGGCTGCACAGCGCTGCAGGTTACAGGCCTGAATaGCAGGGGGCTTCCCAGGCAGCCCGGCACACTCAGCCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: APGSRLHSAAGYRPE*QGASQAARHTQPPP
Trigger: TGGAGGAGGCTGAGTGTGCCGGGCTGCCTGGGAAGCCCCCTGCCATTCAGGCCTGTAACCTGCAGCGCTGTGCAGCCTGGAGCCCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 90 bp CCAGAAGGCCAGGGCTTTCTCTGCACCGCGGCCCCTGTCCTGTGCTaGCTGGGTTCCTGCTCGCCTGCAGGACTGCTGCCGCCACCATCC +
Preference number: 5 (lower is better)
Translates to: PEGQGFLCTAAPVLC*LGSCSPAGLLPPPS
Trigger: GGATGGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGCCGCGGTGCAGAGAAAGCCCTGGCCTTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS TCA 90 bp CCGCGTCCTCTGCCTGTAGGAGGAGCTGTGGAAGGGTGGCGCTGGTaGTCCGGCATCTCCACCCAGTCCAGGGGCCCTGGACCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: PRPLPVGGAVEGWRW*SGISTQSRGPGPKL
Trigger: GAGCTTGGGTCCAGGGCCCCTGGACTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTCCACAGCTCCTCCTACAGGCAGAGGACGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554314.1
CDS GCA 90 bp GCTGGCGCTGGCACATGTGGTCGGGGTAGGCCTCATGGTCGATGGTaGAGAACACCAGGCGGGACTGGTGACCTCCGCCACACTCCGCGC +
Preference number: 5 (lower is better)
Translates to: AGAGTCGRGRPHGRW*RTPGGTGDLRHTPR
Trigger: GCGCGGAGTGTGGCGGAGGTCACCAGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCTACCCCGACCACATGTGCCAGCGCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 90 bp CCCCTGTCCTGTGCTGGCTGGGTTCCTGCTCGCCTGCAGGACTGCTaGCGCCACCATCCGTGTGGGTGCTCCTTCCAGAAGCCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: PLSCAGWVPARLQDC*RHHPCGCSFQKPQA
Trigger: AGCCTGGGGCTTCTGGAAGGAGCACCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS CCA 90 bp AAGGCCAGGGCTTTCTCTGCACCGCGGCCCCTGTCCTGTGCTGGCTaGGTTCCTGCTCGCCTGCAGGACTGCTGCCGCCACCATCCGTGT +
Preference number: 5 (lower is better)
Translates to: KARAFSAPRPLSCAG*VPARLQDCCRHHPC
Trigger: ACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGCCGCGGTGCAGAGAAAGCCCTGGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS CCA 90 bp AGGGTGGCGCTGGTGATCCGGCATCTCCACCCAGTCCAGGGGCCCTaGACCCAAGCTCCTGCCCCCATGGCCATTCTCCAAAGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: RVALVIRHLHPVQGP*TQAPAPMAILQRPG
Trigger: CCCAGGCCTTTGGAGAATGGCCATGGGGGCAGGAGCTTGGGTCCAGGGCCCCTGGACTGGGTGGAGATGCCGGATCACCAGCGCCACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS TCA 90 bp AGGTGGGCCTCACCTGTAGGAGGAGCTGTGGAAGGGTGGCGCTGGTaGTCCGGCATCTCCACCCAGTCCAGGGGCCCTGGACCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: RWASPVGGAVEGWRW*SGISTQSRGPGPKL
Trigger: GAGCTTGGGTCCAGGGCCCCTGGACTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTCCACAGCTCCTCCTACAGGTGAGGCCCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS CCA 90 bp GTGGCTGGCGCTGGCACATGTGGTCGGGGTAGGCCTCATGGTCGATaGTGCAGAACACCAGGCGGGACTGGTGACCTCCGCCACACTCCG +
Preference number: 5 (lower is better)
Translates to: VAGAGTCGRGRPHGR*CRTPGGTGDLRHTP
Trigger: CGGAGTGTGGCGGAGGTCACCAGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCTACCCCGACCACATGTGCCAGCGCCAGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp GGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGACTCTGCCGCCTCACCTaGGGAGCCGAGGACCCGGGC +
Preference number: 5 (lower is better)
Translates to: GLELAFIPTARWAEREAGLCRLT*GAEDPG
Trigger: GCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGAG...TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS TCA 90 bp AGTGCTGCAGGCTCCCGCAGTGGCTGGGCGGCCCAATGGCACAGATaGCCTGTCGCCTCCGAGTGCCCGAGCTGCAGCTCTTGGAGCATA +
Preference number: 5 (lower is better)
Translates to: SAAGSRSGWAAQWHR*PVASECPSCSSWSI
Trigger: TATGCTCCAAGAGCTGCAGCTCGGGCACTCGGAGGCGACAGGTCATCTGTGCCATTGGGCCGCCCAGCCACTGCGGGAGCCTGCAGCACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 90 bp ATGGCCCTGCCTTCCAGCGCTTGGTCTCCGGGCAAGGGTGAAGATTaGAGGAACGCCGGTCAGCTGGCCGTGGCTGGCGCTGGCACATGT +
Preference number: 5 (lower is better)
Translates to: MALPSSAWSPGKGED*RNAGQLAVAGAGTC
Trigger: ACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGACCAAGCGCTGGAAGGCAGGGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 90 bp ACATTGGCCCACAGAGGCAACGAAGTACCAGCGGGCAGCCCAGTCTaGGCAAGAGCCATGGGCACTGGGCAGCAGGCACCGCACGGGGTA +
Preference number: 5 (lower is better)
Translates to: TLAHRGNEVPAGSPV*ARAMGTGQQAPHGV
Trigger: TACCCCGTGCGGTGCCTGCTGCCCAGTGCCCATGGCTCTTGCGCAGACTGGGCTGCCCGCTGGTACTTCGTTGCCTCTGTGGGCCAATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS GCA 90 bp CCTGGCCCTGGGATCCAGGATGCTTCCACCAGAGTCTGTCCACTGTaGAGACCTGCCCCCGGCTGGTGCCACAGCAGCCTTCACCCACAG +
Preference number: 5 (lower is better)
Translates to: PGPGIQDASTRVCPL*RPAPGWCHSSLHPQ
Trigger: CTGTGGGTGAAGGCTGCTGTGGCACCAGCCGGGGGCAGGTCTGCACAGTGGACAGACTCTGGTGGAAGCATCCTGGATCCCAGGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS CCA 90 bp CTCCGGGCAAGGGTGAAGATTGCAGGAACGCCGGTCAGCTGGCCGTaGCTGGCGCTGGCACATGTGGTCGGGGTAGGCCTCATGGTCGAT +
Preference number: 5 (lower is better)
Translates to: LRARVKIAGTPVSWP*LALAHVVGVGLMVD
Trigger: ATCGACCATGAGGCCTACCCCGACCACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 90 bp CTTGGTCTCCGGGCAAGGGTGAAGATTGCAGGAACGCCGGTCAGCTaGCCGTGGCTGGCGCTGGCACATGTGGTCGGGGTAGGCCTCATG +
Preference number: 5 (lower is better)
Translates to: LGLRARVKIAGTPVS*PWLALAHVVGVGLM
Trigger: CATGAGGCCTACCCCGACCACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGACCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 90 bp CAAGGCTCCACATCCACAGGCTTGGAGTGCTGCAGGCTCCCGCAGTaGCTGGGCGGCCCAATGGCACAGATGACCTGTCGCCTCCGAGTG +
Preference number: 5 (lower is better)
Translates to: QGSTSTGLECCRLPQ*LGGPMAQMTCRLRV
Trigger: CACTCGGAGGCGACAGGTCATCTGTGCCATTGGGCCGCCCAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGATGTGGAGCCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 90 bp GGCTGGGCTGGCCCACACAGCCTTCCCCAAGAGGACCGGCTGCAGTaGCCACGTTGTCATAGCAACAGCCAAACTGGGAGCCCCGGCACT +
Preference number: 5 (lower is better)
Translates to: GWAGPHSLPQEDRLQ*PRCHSNSQTGSPGT
Trigger: AGTGCCGGGGCTCCCAGTTTGGCTGTTGCTATGACAACGTGGCCACTGCAGCCGGTCCTCTTGGGGAAGGCTGTGTGGGCCAGCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCAAACGCAGCCTGTTaGCAGGCTGTGGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWPNAAC*QAVGVK
Trigger: CTTCACACCCACAGCCTGCAAACAGGCTGCGTTTGG...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CAA 90 bp TGCCTGCAGGGGGTGGATGATCAGGGATCCGTCGAACTGCAGCCTGTGCCTGTCCCCTGGCCCAGGCTGTaGGTCTTGCCGCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: CLQGVDDQGSVELQPVPVPWPRL*VLPPET
Trigger: GGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGGG...GACAGGCACAGGCTGCAGTTCGACGGATCCCTGATCATCCACCCCCTGCAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS GCA 90 bp CAGGGCTGCGTGTTACAAGGCTCCACATCCACAGGCTTGGAGTGCTaGAGGCTCCCGCAGTGGCTGGGCGGCCCAATGGCACAGATGACC +
Preference number: 5 (lower is better)
Translates to: QGCVLQGSTSTGLEC*RLPQWLGGPMAQMT
Trigger: GGTCATCTGTGCCATTGGGCCGCCCAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGATGTGGAGCCTTGTAACACGCAGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 90 bp GTGTCGTCTGAGCAGGAGAGCCGCACCAACTGCCCCAGGGCTGCCTaGACCAACGAGGGCTCCACACCTGCCAAGCTAATCCATGGCTGG +
Preference number: 5 (lower is better)
Translates to: VSSEQESRTNCPRAA*TNEGSTPAKLIHGW
Trigger: CCAGCCATGGATTAGCTTGGCAGGTGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTCCTGCTCAGACGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS GCA 90 bp AGCAGCGTGCCATCTGGGGACTGGTGGACACGGTGGCCATCAGCCTaGACAGGTAGCCCGTTCCTGGAGGAGAGAGGACACTGGGAGAGC +
Preference number: 5 (lower is better)
Translates to: SSVPSGDWWTRWPSA*TGSPFLEERGHWES
Trigger: GCTCTCCCAGTGTCCTCTCTCCTCCAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCGTGTCCACCAGTCCCCAGATGGCACGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554527.1
CDS GCA 90 bp GTGTCGTCTGAGCAGGAGAGCCGCACCAACTGCCCCAGGGCTGCCTaGACCAACGAGGGCTCCACACCTGCCAAGCTAATCCTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: VSSEQESRTNCPRAA*TNEGSTPAKLILER
Trigger: CCTCTCCAGGATTAGCTTGGCAGGTGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTGGTGCGGCTCTCCTGCTCAGACGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555700.1
ENST00000557061.5
CDS CCA 90 bp AGGTCGTGCCGTCACCCCCACACCGCAGACACTTGTCCTCCTGCTTaGACGAGTCCAGCTCGTGATCACAGCCGACAACCCGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RSCRHPHTADTCPPA*TSPARDHSRQPGSC
Trigger: GCAGCTGCCGGGTTGTCGGCTGTGATCACGAGCTGGACTCGTCCAAGCAGGAGGACAAGTGTCTGCGGTGTGGGGGTGACGGCACGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555035.1
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp AGGCTGCCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGTGGGGCTGGTGGGTGTaGTGGACTGTAGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: RLPISLPLDGWGREAFGTWGWWV*WTVEAT
Trigger: AGTGGCTTCTACAGTCCACAACACCCACCAGCCCCA...CGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGGCAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CAA 90 bp CTTCGGCACGGCAGGTCATCCGGATCCGCTGGCCTGGACTGGCATCCACCACCCGGTAACTGGCTGCCGTaGAGGCTAAACACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LRHGRSSGSAGLDWHPPPGNWLP*RLNTGW
Trigger: CCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACC...GGGTGGTGGATGCCAGTCCAGGCCAGCGGATCCGGATGACCTGCCGTGCCGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CAA 90 bp TGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCGCCAAGATCGCACCATaGTACTCCAGCCTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: CHSMAGGGKPSARQVIRIAKIAP*YSSLGK
Trigger: CTTGCCCAGGCTGGAGTACAATGGTGCGATCTTGGC...GATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS TCA 90 bp TGCCAAGCTAATCCTGTAGGAGGAGCTGTGGAAGGGTGGCGCTGGTaGTCCGGCATCTCCACCCAGTCCAGGGGCCCTGGACCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: CQANPVGGAVEGWRW*SGISTQSRGPGPKL
Trigger: GAGCTTGGGTCCAGGGCCCCTGGACTGGGTGGAGATGCCGGATCACCAGCGCCACCCTTCCACAGCTCCTCCTACAGGATTAGCTTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000559759.1
ENST00000644200.2
CDS GCA 90 bp GTGCCAACATGCCAGGCCTGGTCACTGAGGAGGGGGCAGTCCTCATaGACACAGGGCTCAGTCAGAGGTGGCCGGTCTTCCAAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: VPTCQAWSLRRGQSS*TQGSVRGGRSSKEH
Trigger: GTGCTCCTTGGAAGACCGGCCACCTCTGACTGAGCCCTGTGTGCATGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGGCATGTTGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 90 bp CACCTGTCAGAGGAGATGGGCTGGCCATCTTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCGTCTGAGCAGGAGAGCCGCACCAAC +
Preference number: 5 (lower is better)
Translates to: HLSEEMGWPSFCQAA*DSGAVSSEQESRTN
Trigger: GTTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS CCA 90 bp CTCCAACTGGCATGCTCCTTGTCTGGGCGTCCTAACCCCCTCACCTaGGGAAGGTGGGCCTCACCTGTAGGAGGAGCTGTGGAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: LQLACSLSGRPNPLT*GRWASPVGGAVEGW
Trigger: CCACCCTTCCACAGCTCCTCCTACAGGTGAGGCCCACCTTCCCCAGGTGAGGGGGTTAGGACGCCCAGACAAGGAGCATGCCAGTTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS-3UTR CAA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGAACGGCATCCAGGGGTaGCTGGCAGGGGTGTGCACA +
Preference number: 5 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWNGIQG*LAGVCT
Trigger: TGTGCACACCCCTGCCAGCAACCCCTGGATGCCGTT...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CAA 90 bp CCCATCTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTAGGATCAAATCACAGTaGGCCAGCTCTGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: PISLPLDGWGREAFGTAGRIKSQ*ASSGWS
Trigger: CGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCT...ACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAGATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CAA 90 bp TGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCAGGATCAAATCACAGTaGGCCAGCTCTGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: CHSMAGGGKPSARQVIRIRIKSQ*ASSGWS
Trigger: CGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCT...GATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CAA 90 bp CTGAGCTGGACCCATCGCTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGGCTGAGATCGCGCCATaGCCCTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: LSWTHRWSRSCPLKATQVAEIAP*PSSLGN
Trigger: GTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAGC...CACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CAA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGCCCAGGCTGTTGGTCTaGCCGCCAGAGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWPRLLV*PPETTR
Trigger: TCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGGG...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS GCA 90 bp GATCTGGTTGTAGCCTCGGCTGAGGTCATTAGCGTCAAAGGTGCCTaGGACGGGGTAGCAGGTCGTGCCGTCACCCCCACACCGCAGACA +
Preference number: 5 (lower is better)
Translates to: DLVVASAEVISVKGA*DGVAGRAVTPTPQT
Trigger: TGTCTGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCTAATGACCTCAGCCGAGGCTACAACCAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000554301.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 90 bp TGGGATCCAGGATGCTTCCACCAGAGTCTGTCCACTGTGCAGACCTaGCCCCGGCTGGTGCCACAGCAGCCTTCACCCACAGAGCTAGAG +
Preference number: 5 (lower is better)
Translates to: WDPGCFHQSLSTVQT*PRLVPQQPSPTELE
Trigger: CTCTAGCTCTGTGGGTGAAGGCTGCTGTGGCACCAGCCGGGGGCAGGTCTGCACAGTGGACAGACTCTGGTGGAAGCATCCTGGATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS CCA 90 bp CTGCAGCTCTTGGAGCATAGACCCCAGGTGCCAACATGCCAGGCCTaGTCACTGAGGAGGGGGCAGTCCTCATGCACACAGGGCTCAGTC +
Preference number: 5 (lower is better)
Translates to: LQLLEHRPQVPTCQA*SLRRGQSSCTQGSV
Trigger: GACTGAGCCCTGTGTGCATGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGGCATGTTGGCACCTGGGGTCTATGCTCCAAGAGCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 90 bp CCATCAGCCTGCACAGGTAGCCCGTTCCTGGAGGAGAGAGGACACTaGGAGAGCCATCAAGGGCCTCTGGAGGTCTGGGAGACAGAGGGA +
Preference number: 5 (lower is better)
Translates to: PSACTGSPFLEERGH*ESHQGPLEVWETEG
Trigger: TCCCTCTGTCTCCCAGACCTCCAGAGGCCCTTGATGGCTCTCCCAGTGTCCTCTCTCCTCCAGGAACGGGCTACCTGTGCAGGCTGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554527.1
CDS CCA 90 bp AACCTGTCAGAGGAGATGGGCTGGCCATCTTTCTGCCAGGCAGCCTaGGATTCCGGGGCAGTGTCGTCTGAGCAGGAGAGCCGCACCAAC +
Preference number: 5 (lower is better)
Translates to: NLSEEMGWPSFCQAA*DSGAVSSEQESRTN
Trigger: GTTGGTGCGGCTCTCCTGCTCAGACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555123.5
CDS TCA 90 bp TCTTGGAGCATAGACCCCAGGTGCCAACATGCCAGGCCTGGTCACTaGGGAGGGGGCAGTCCTCATGCACACAGGGCTCAGTCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: SWSIDPRCQHARPGH*GGGSPHAHRAQSEV
Trigger: CACCTCTGACTGAGCCCTGTGTGCATGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGGCATGTTGGCACCTGGGGTCTATGCTCCAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 90 bp GCTGGGGACGACGGGGCCCATGGAGAGATCCCTGGCAGCTGCTCATaGACTCTTGCTCCGAGGCAAAGTTATTGGCATTGCCATGGCAGC +
Preference number: 5 (lower is better)
Translates to: AGDDGAHGEIPGSCS*TLAPRQSYWHCHGS
Trigger: GCTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGGGCCCCGTCGTCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS GCA 90 bp CACCAACTGCCCCAGGGCTGCCTGCACCAACGAGGGCTCCACACCTaGCAAGCTAATCCTGGAGAGGTGGGAAGTGAGATCTGTAGGAGG +
Preference number: 5 (lower is better)
Translates to: HQLPQGCLHQRGLHT*QANPGEVGSEICRR
Trigger: CCTCCTACAGATCTCACTTCCCACCTCTCCAGGATTAGCTTGGCAGGTGTGGAGCCCTCGTTGGTGCAGGCAGCCCTGGGGCAGTTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS CCA 90 bp GGCTCAGTCAGAGGTGGCCGGTCTTCCAAGGAGCACGCTGCGGTATaGAGCAAAGAACCCCTTTCACCCCGGCAAGTAACGCTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: GSVRGGRSSKEHAAV*SKEPLSPRQVTLRF
Trigger: GAAGCGGAGCGTTACTTGCCGGGGTGAAAGGGGTTCTTTGCTCCATACCGCAGCGTGCTCCTTGGAAGACCGGCCACCTCTGACTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 90 bp ACTGAGGAGGGGGCAGTCCTCATGCACACAGGGCTCAGTCAGAGGTaGCCGGTCTTCCAAGGAGCACGCTGCGGTATGGAGCAAAGAACC +
Preference number: 5 (lower is better)
Translates to: TEEGAVLMHTGLSQR*PVFQGARCGMEQRT
Trigger: GGTTCTTTGCTCCATACCGCAGCGTGCTCCTTGGAAGACCGGCCACCTCTGACTGAGCCCTGTGTGCATGAGGACTGCCCCCTCCTCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCGGATCCGCTGGCTGATACAGCAGGACTaGGCATGCCCTTTAGAAAAC +
Preference number: 5 (lower is better)
Translates to: SMAGGGKPSARQVIRIRWLIQQD*ACPLEN
Trigger: GTTTTCTAAAGGGCATGCCAAGTCCTGCTGTATCAG...CCAGCGGATCCGGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS GCA 90 bp CACACAGGGCTCAGTCAGAGGTGGCCGGTCTTCCAAGGAGCACGCTaGGGTATGGAGCAAAGAACCCCTTTCACCCCGGCAAGTAACGCT +
Preference number: 5 (lower is better)
Translates to: HTGLSQRWPVFQGAR*GMEQRTPFTPASNA
Trigger: AGCGTTACTTGCCGGGGTGAAAGGGGTTCTTTGCTCCATACCGCAGCGTGCTCCTTGGAAGACCGGCCACCTCTGACTGAGCCCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 90 bp AACATTCTTCACAGCTCGGCTGAGGTCATTAGCGTCAAAGGTGCCTaGGACGGGGTAGCAGGTCGTGCCGTCACCCCCACACCGCAGACA +
Preference number: 5 (lower is better)
Translates to: NILHSSAEVISVKGA*DGVAGRAVTPTPQT
Trigger: TGTCTGCGGTGTGGGGGTGACGGCACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCTAATGACCTCAGCCGAGCTGTGAAGAATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000555123.5
CDS GCA 90 bp CGACGGGGCCCATGGAGAGATCCCTGGCAGCTGCTCATGCACTCTTaGTCCGAGGCAAAGTTATTGGCATTGCCATGGCAGCCGCCATAC +
Preference number: 5 (lower is better)
Translates to: RRGPWRDPWQLLMHS*SEAKLLALPWQPPY
Trigger: GTATGGCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGGGCCCCGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTCTCTGCCGCCTCACCTaGGGAGCCGAGGACCCGGGC +
Preference number: 5 (lower is better)
Translates to: FQKITPFASQREEAKSPSLCRLT*GAEDPG
Trigger: GCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGAG...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp GGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGACACCACCATACGACTTaGTGCAGCCAGCGTGATGGG +
Preference number: 5 (lower is better)
Translates to: GLELAFIPTARWAEREAGHHHTT*CSQRDG
Trigger: CCCATCACGCTGGCTGCACAAAGTCGTATGGTGGTG...TCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CAA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGCCCAGCAGCCCCCGCTaGGCCAAAGTCCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRPSSPR*AKVLSW
Trigger: CCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCTGGG...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCCAAGATCGCACCATaGTACTCCAGCCTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: GLGLELAFIPTARWAEREAKIAP*YSSLGK
Trigger: CTTGCCCAGGCTGGAGTACAATGGTGCGATCTTGGC...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGCCAGAAGCGGTTACATaGGCCCACAGAGGCAACGAA +
Preference number: 5 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWPEAVT*AHRGNE
Trigger: TTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGG...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CAA 90 bp CAAATCACAGTTGGCCAGCTCTGGCTGGTCGACGCAGTCCCTGCCAGGGTCCCTTCCGAGGCAAAGTTATaGGCATTGCCATGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: QITVGQLWLVDAVPARVPSEAKL*ALPWQP
Trigger: CGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGA...AGGGACCCTGGCAGGGACTGCGTCGACCAGCCAGAGCTGGCCAACTGTGATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS CCA 90 bp TTATTGGCATTGCCATGGCAGCCGCCATACCAGAAGCGGTTACATTaGCCCACAGAGGCAACGAAGTACCAGCGGGCAGCCCAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: LLALPWQPPYQKRLH*PTEATKYQRAAQSA
Trigger: CGCAGACTGGGCTGCCCGCTGGTACTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCTCTGCCGCCTCACCTaGGGAGCCGAGGACCCGGGC +
Preference number: 5 (lower is better)
Translates to: FLPSPMNYFGLGLELAFILCRLT*GAEDPG
Trigger: GCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGAG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGTCAGTTCACACTTGTTaGGGGCGCTGTAGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWSVHTC*GRCSRA
Trigger: TGCCCTACTACAGCGCCCCAAACAAGTGTGAACTGA...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CAA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGCCCTATGATGCGAAGTaGGATCTTCTGGGAGTCGCG +
Preference number: 5 (lower is better)
Translates to: GLGLELAFIPTARWAEREPYDAK*DLLGVA
Trigger: CGCGACTCCCAGAAGATCCAACTTCGCATCATAGGG...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp CTGCCTGGCTCCCCTGGTAGGCACTGCACGTGTAGGAGCCCTCATCCCTGGCCCAACAGATTGCTCTTCTaGAAAACAGCAGCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: LPGSPGRHCTCRSPHPWPNRLLF*KTAACG
Trigger: ACCACAGGCTGCTGTTTTCAAGAAGAGCAATCTGTT...GGGCCAGGGATGAGGGCTCCTACACGTGCAGTGCCTACCAGGGGAGCCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CAA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTGAGATCGCGCCATaGCCCTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRAEIAP*PSSLGN
Trigger: GTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAGC...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACCCCTGGCCCAGGCTGTaGGTCTTGCCGCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHPWPRL*VLPPET
Trigger: GGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGGG...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS CCA 90 bp TTATTGGCATTGCCATGGCAGCCGCCATACCAGAAGCGGTTACATTaGCCCACAGAGGCAACGAAGTACCAGCGGGCAGCCCAGTCATGG +
Preference number: 5 (lower is better)
Translates to: LLALPWQPPYQKRLH*PTEATKYQRAAQSW
Trigger: CCATGACTGGGCTGCCCGCTGGTACTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555445.5
CDS-3UTR CAA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCTCTGCCGCCTCACCTaGGGAGCCGAGGACCCGGGC +
Preference number: 5 (lower is better)
Translates to: NVFQKITPFASQREEAKSLCRLT*GAEDPG
Trigger: GCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGAG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGACACAGACATCCCTCTaGCCAGGCTCGCAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRTQTSL*PGSQGV
Trigger: GACGCCCTGCGAGCCTGGCAAGAGGGATGTCTGTGT...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CAA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTCCCGAGCTGCAGCTCTaGGAGCATAGACCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVPELQL*EHRPQV
Trigger: CACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGGG...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGAACGGCATCCAGGGGTaGCTGGCAGGGGTGTGCACA +
Preference number: 5 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRNGIQG*LAGVCT
Trigger: TGTGCACACCCCTGCCAGCAACCCCTGGATGCCGTT...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CAA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTAACGGCATCCAGGGGTaGCTGGCAGGGGTGTGCACA +
Preference number: 5 (lower is better)
Translates to: QMNRHSQICMLASGGLQGNGIQG*LAGVCT
Trigger: TGTGCACACCCCTGCCAGCAACCCCTGGATGCCGTT...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CAA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCCAGCAGCCCCCGCTaGGCCAAAGTCCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPSSPR*AKVLSW
Trigger: CCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCTGGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGCCCAGCAGCCCCCGCTaGGCCAAAGTCCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVPSSPR*AKVLSW
Trigger: CCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCTGGG...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGGCTGGAAACCCAAACGCAGCCTGTTaGCAGGCTGTGGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: LELAFIPTARWAEREAGNPNAAC*QAVGVK
Trigger: CTTCACACCCACAGCCTGCAAACAGGCTGCGTTTGG...GTTTCCAGCCTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp CTCTCTGCCACTCGATGGCTGGGGGCGGGAAGCCTTCGGCACGGCAGGTCATCCACACTGGGTGGGTTTTaGAAAGAGCTAATGTATTCC +
Preference number: 5 (lower is better)
Translates to: LSATRWLGAGSLRHGRSSTLGGF*KELMYS
Trigger: GGAATACATTAGCTCTTTCAAAAACCCACCCAGTGT...GGATGACCTGCCGTGCCGAAGGCTTCCCGCCCCCAGCCATCGAGTGGCAGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CAA 90 bp TTCTACAGCCACTCGGCTAATGACCAGGGAGCCATCAGGCTGCAGCTGGTGTCTGGTAACTGGCTGCCGTaGAGGCTAAACACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: FYSHSANDQGAIRLQLVSGNWLP*RLNTGW
Trigger: CCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACC...AGACACCAGCTGCAGCCTGATGGCTCCCTGGTCATTAGCCGAGTGGCTGTAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CAA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCCTGGCCCAGGCTGTaGGTCTTGCCGCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPWPRL*VLPPET
Trigger: GGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCCTGGCCCAGGCTGTaGGTCTTGCCGCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPWPRL*VLPPET
Trigger: GGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS GCA 90 bp GGCAGCTGCTCATGCACTCTTGCTCCGAGGCAAAGTTATTGGCATTaGCATGGCAGCCGCCATACCAGAAGCGGTTACATTGGCCCACAG +
Preference number: 5 (lower is better)
Translates to: GSCSCTLAPRQSYWH*HGSRHTRSGYIGPQ
Trigger: CTGTGGGCCAATGTAACCGCTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS CCA 90 bp CCTGCCAAGCTAATCCTGGAGAGGTGGGAAGTGAGATCTGCTGACTaGCATGAGCGCCAGGACCAGAACCACCCTAAGCAGTGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: PAKLILERWEVRSAD*HERQDQNHPKQCVP
Trigger: TGGAACACACTGCTTAGGGTGGTTCTGGTCCTGGCGCTCATGCCAGTCAGCAGATCTCACTTCCCACCTCTCCAGGATTAGCTTGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS-3UTR CAA 90 bp GCTCAGCTCAGCCTCAGACAGCACGGCCATGTCACCCCCTATGATGCGAAGTTGTCAGTTCACACTTGTTaGGGGCGCTGTAGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: AQLSLRQHGHVTPYDAKLSVHTC*GRCSRA
Trigger: TGCCCTACTACAGCGCCCCAAACAAGTGTGAACTGA...CAACTTCGCATCATAGGGGGTGACATGGCCGTGCTGTCTGAGGCTGAGCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CAA 90 bp GTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGACACAGACATCCCTCTaGCCAGGCTCGCAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: VNSWHSRSWSNTHCHKAGTQTSL*PGSQGV
Trigger: GACGCCCTGCGAGCCTGGCAAGAGGGATGTCTGTGT...CCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CAA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAACGGCATCCAGGGGTaGCTGGCAGGGGTGTGCACA +
Preference number: 5 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHNGIQG*LAGVCT
Trigger: TGTGCACACCCCTGCCAGCAACCCCTGGATGCCGTT...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CAA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCCCAGCAGCCCCCGCTaGGCCAAAGTCCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: KITPFASQREEAKSPSSFPSSPR*AKVLSW
Trigger: CCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCTGGG...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCCCCAGCAGCCCCCGCTaGGCCAAAGTCCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPPSSPR*AKVLSW
Trigger: CCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCTGGG...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTGGTAACTGGCTGCCGTaGAGGCTAAACACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRAGNWLP*RLNTGW
Trigger: CCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACC...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTGCTGAGATCGCGCCATaGCCCTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: FQKITPFASQREEAKSPSAEIAP*PSSLGN
Trigger: GTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAGC...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGCTGAGATCGCGCCATaGCCCTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFAEIAP*PSSLGN
Trigger: GTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAGC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp AGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCCCCAGGCTGTTGGTCTaGCCGCCAGAGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: SPMNYFGLGLELAFIPTAPRLLV*PPETTR
Trigger: TCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGGG...GGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTCCCTGGCCCAGGCTGTaGGTCTTGCCGCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: KITPFASQREEAKSPSSFPWPRL*VLPPET
Trigger: GGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGGG...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS CCA 90 bp CTGCTCATGCACTCTTGCTCCGAGGCAAAGTTATTGGCATTGCCATaGCAGCCGCCATACCAGAAGCGGTTACATTGGCCCACAGAGGCA +
Preference number: 5 (lower is better)
Translates to: LLMHSCSEAKLLALP*QPPYQKRLHWPTEA
Trigger: TGCCTCTGTGGGCCAATGTAACCGCTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGCTCTGCCGCCTCACCTaGGGAGCCGAGGACCCGGGC +
Preference number: 5 (lower is better)
Translates to: FPIAILILLMLFLMTDSLLCRLT*GAEDPG
Trigger: GCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGAG...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CAA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAACACAGACATCCCTCTaGCCAGGCTCGCAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERTQTSL*PGSQGV
Trigger: GACGCCCTGCGAGCCTGGCAAGAGGGATGTCTGTGT...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCACACAGACATCCCTCTaGCCAGGCTCGCAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: SSFLPSPMNYFGLGLELATQTSL*PGSQGV
Trigger: GACGCCCTGCGAGCCTGGCAAGAGGGATGTCTGTGT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCCGAGCTGCAGCTCTaGGAGCATAGACCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPELQL*EHRPQV
Trigger: CACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCCGAGCTGCAGCTCTaGGAGCATAGACCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPELQL*EHRPQV
Trigger: CACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCCCGAGCTGCAGCTCTaGGAGCATAGACCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: CIPEDNSLCQPERGSQESPELQL*EHRPQV
Trigger: CACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGGG...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCCCGAGCTGCAGCTCTaGGAGCATAGACCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: EDNSLCQPERGSQESIFLPELQL*EHRPQV
Trigger: CACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGGG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAAACGGCATCCAGGGGTaGCTGGCAGGGGTGTGCACA +
Preference number: 5 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERNGIQG*LAGVCT
Trigger: TGTGCACACCCCTGCCAGCAACCCCTGGATGCCGTT...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCCCCAGCAGCCCCCGCTaGGCCAAAGTCCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVPSSPR*AKVLSW
Trigger: CCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCTGGG...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACCCCAGCAGCCCCCGCTaGGCCAAAGTCCTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LKTAACGYVRDANTAEGYPSSPR*AKVLSW
Trigger: CCAGCTCAGGACTTTGGCCAAGCGGGGGCTGCTGGG...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGCCAAACGCAGCCTGTTaGCAGGCTGTGGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRPNAAC*QAVGVK
Trigger: CTTCACACCCACAGCCTGCAAACAGGCTGCGTTTGG...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp ATCCACCACCCGGGGCTGGTTCTGGTCCAAACGCAGCCTGTTTGCAGGCTGTGGAACAGATTGCTCTTCTaGAAAACAGCAGCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: IHHPGLVLVQTQPVCRLWNRLLF*KTAACG
Trigger: ACCACAGGCTGCTGTTTTCAAGAAGAGCAATCTGTT...CCACAGCCTGCAAACAGGCTGCGTTTGGACCAGAACCAGCCCCGGGTGGTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CAA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGCTGAGATCGCGCCATaGCCCTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIAEIAP*PSSLGN
Trigger: GTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAGC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCCCAGAAGCGGTTACATaGGCCCACAGAGGCAACGAA +
Preference number: 5 (lower is better)
Translates to: QKADTGESRTQETEVAVSPEAVT*AHRGNE
Trigger: TTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGG...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCCCAGGCTGTTGGTCTaGCCGCCAGAGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: EDNSLCQPERGSQESIFLPRLLV*PPETTR
Trigger: TCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGGG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCCAGGCTGTTGGTCTaGCCGCCAGAGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPRLLV*PPETTR
Trigger: TCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCCAGGCTGTTGGTCTaGCCGCCAGAGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPRLLV*PPETTR
Trigger: TCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp ACACAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGCCGTCACAGCCAGATTaGCATGTTGGCCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: TQVSDEPSQPDLHVGLRRPSQPD*HVGLRR
Trigger: CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGG...CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS CCA 90 bp GTAGAAGTTCTCCCCCTTGGGAATGCAGTTCAGTTCACACTTGTTTaGGGCTGGGGTGGGCAGGAAGGCAAGACTGAGATCCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: VEVLPLGNAVQFTLV*GWGGQEGKTEILRL
Trigger: CAACCTCAGGATCTCAGTCTTGCCTTCCTGCCCACCCCAGCCCCAAACAAGTGTGAACTGAACTGCATTCCCAAGGGGGAGAACTTCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555035.1
CDS-3UTR CAA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCTCAGTTCACACTTGTTaGGGGCGCTGTAGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: QKADTGESRTQETEVAVSSVHTC*GRCSRA
Trigger: TGCCCTACTACAGCGCCCCAAACAAGTGTGAACTGA...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACACACAGACATCCCTCTaGCCAGGCTCGCAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: SLSLYRAGWSALHRCQMNTQTSL*PGSQGV
Trigger: GACGCCCTGCGAGCCTGGCAAGAGGGATGTCTGTGT...GTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CAA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCAACGGCATCCAGGGGTaGCTGGCAGGGGTGTGCACA +
Preference number: 5 (lower is better)
Translates to: FLPSPMNYFGLGLELAFINGIQG*LAGVCT
Trigger: TGTGCACACCCCTGCCAGCAACCCCTGGATGCCGTT...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACTGGGGCTGGTGGGTGTaGTGGACTGTAGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHWGWWV*WTVEAT
Trigger: AGTGGCTTCTACAGTCCACAACACCCACCAGCCCCA...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CAA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCAGGTAACTGGCTGCCGTaGAGGCTAAACACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSGNWLP*RLNTGW
Trigger: CCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACC...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGGCTGAGCGTGAGAACAGATTGCTCTTCTaGAAAACAGCAGCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: GLGLELAFIPTARWAERENRLLF*KTAACG
Trigger: ACCACAGGCTGCTGTTTTCAAGAAGAGCAATCTGTT...CTCACGCTCAGCCCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGAGCCAAGATCGCACCATaGTACTCCAGCCTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRAKIAP*YSSLGK
Trigger: CTTGCCCAGGCTGGAGTACAATGGTGCGATCTTGGC...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGGCCAAGATCGCACCATaGTACTCCAGCCTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQAKIAP*YSSLGK
Trigger: CTTGCCCAGGCTGGAGTACAATGGTGCGATCTTGGC...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCAGCCAAGATCGCACCATaGTACTCCAGCCTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSAKIAP*YSSLGK
Trigger: CTTGCCCAGGCTGGAGTACAATGGTGCGATCTTGGC...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCCTGGCCCAGGCTGTaGGTCTTGCCGCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPWPRL*VLPPET
Trigger: GGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGCCGTCACAGCCAGATTaGCATGTTGGCCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: PYELFWTGAGTSLHPYCQPSQPD*HVGLRR
Trigger: CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGG...CTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp CCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTCACCACCATACGACTTaGTGCAGCCAGCGTGATGGG +
Preference number: 5 (lower is better)
Translates to: PSPMNYFGLGLELAFIPTHHHTT*CSQRDG
Trigger: CCCATCACGCTGGCTGCACAAAGTCGTATGGTGGTG...AGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000555123.5
CDS-3UTR CAA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTCACCACCATACGACTTaGTGCAGCCAGCGTGATGGG +
Preference number: 5 (lower is better)
Translates to: FQKITPFASQREEAKSPSHHHTT*CSQRDG
Trigger: CCCATCACGCTGGCTGCACAAAGTCGTATGGTGGTG...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTGGGGCTGGTGGGTGTaGTGGACTGTAGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFWGWWV*WTVEAT
Trigger: AGTGGCTTCTACAGTCCACAACACCCACCAGCCCCA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGATGGGGCTGGTGGGTGTaGTGGACTGTAGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERWGWWV*WTVEAT
Trigger: AGTGGCTTCTACAGTCCACAACACCCACCAGCCCCA...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTCCCTATGATGCGAAGTaGGATCTTCTGGGAGTCGCG +
Preference number: 5 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPPYDAK*DLLGVA
Trigger: CGCGACTCCCAGAAGATCCAACTTCGCATCATAGGG...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCAAACGCAGCCTGTTaGCAGGCTGTGGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPNAAC*QAVGVK
Trigger: CTTCACACCCACAGCCTGCAAACAGGCTGCGTTTGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTCCAAACGCAGCCTGTTaGCAGGCTGTGGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: EDNSLCQPERGSQESIFLPNAAC*QAVGVK
Trigger: CTTCACACCCACAGCCTGCAAACAGGCTGCGTTTGG...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAGGATCAAATCACAGTaGGCCAGCTCTGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: AGNVNSWHSRSWSNTHCHRIKSQ*ASSGWS
Trigger: CGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCT...GTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp GAGGCTGGAAACGTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCAGGATCAAATCACAGTaGGCCAGCTCTGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: EAGNVNSWHSRSWSNTHCRIKSQ*ASSGWS
Trigger: CGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCT...GCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCACGTTTCCAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp CTGAGCTGGACCCATCGCTGGTCTCGGTCCTGCCCATTGAAAGCGACACAGGTGACACTGGGTGGGTTTTaGAAAGAGCTAATGTATTCC +
Preference number: 5 (lower is better)
Translates to: LSWTHRWSRSCPLKATQVTLGGF*KELMYS
Trigger: GGAATACATTAGCTCTTTCAAAAACCCACCCAGTGT...CACCTGTGTCGCTTTCAATGGGCAGGACCGAGACCAGCGATGGGTCCAGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216658.9
ENST00000557061.5
CDS-3UTR CAA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGCTGAGATCGCGCCATaGCCCTCCAGCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: LLFLKTAACGYVRDANTAAEIAP*PSSLGN
Trigger: GTTGCCCAGGCTGGAGGGCAATGGCGCGATCTCAGC...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GTGAACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGTCCGAGGCAAAGTTATaGGCATTGCCATGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: VNSWHSRSWSNTHCHKAGSEAKL*ALPWQP
Trigger: CGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGA...CCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CAA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCCAGGCTGTTGGTCTaGCCGCCAGAGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: NVFQKITPFASQREEAKSPRLLV*PPETTR
Trigger: TCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGGG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCGTCACAGCCAGATTaGCATGTTGGCCTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPSQPD*HVGLRR
Trigger: CCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGAGGGGCTCCTCATaGTCACTGTACAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: VILATQKADTGESRTQETERGSS*SLYRAG
Trigger: GCCTGCTCTGTACAGTGACAATGAGGAGCCCCTCTC...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGAGAGAGGGGCTCCTCATaGTCACTGTACAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERERGSS*SLYRAG
Trigger: GCCTGCTCTGTACAGTGACAATGAGGAGCCCCTCTC...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS CCA 90 bp CATCAACCACAGCCTCCCTGTGCTTGTAGTAGAAGTTCTCCCCCTTaGGAATGCAGTTCAGTTCACACTTGTTTGGGGCGCTGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: HQPQPPCACSRSSPP*ECSSVHTCLGRCSR
Trigger: CCTACTACAGCGCCCCAAACAAGTGTGAACTGAACTGCATTCCCAAGGGGGAGAACTTCTACTACAAGCACAGGGAGGCTGTGGTTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCATCAGTTCACACTTGTTaGGGGCGCTGTAGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSSVHTC*GRCSRA
Trigger: TGCCCTACTACAGCGCCCCAAACAAGTGTGAACTGA...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CAA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCCGAGCTGCAGCTCTaGGAGCATAGACCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPELQL*EHRPQV
Trigger: CACCTGGGGTCTATGCTCCAAGAGCTGCAGCTCGGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCACCACCATACGACTTaGTGCAGCCAGCGTGATGGG +
Preference number: 5 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIHHHTT*CSQRDG
Trigger: CCCATCACGCTGGCTGCACAAAGTCGTATGGTGGTG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTTGGGGCTGGTGGGTGTaGTGGACTGTAGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: SLILAQNTSLIQQDLACPWGWWV*WTVEAT
Trigger: AGTGGCTTCTACAGTCCACAACACCCACCAGCCCCA...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CAA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCCCCTATGATGCGAAGTaGGATCTTCTGGGAGTCGCG +
Preference number: 5 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFPYDAK*DLLGVA
Trigger: CGCGACTCCCAGAAGATCCAACTTCGCATCATAGGG...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTCCCTATGATGCGAAGTaGGATCTTCTGGGAGTCGCG +
Preference number: 5 (lower is better)
Translates to: PSPMNYFGLGLELAFIPTPYDAK*DLLGVA
Trigger: CGCGACTCCCAGAAGATCCAACTTCGCATCATAGGG...AGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCCCCTATGATGCGAAGTaGGATCTTCTGGGAGTCGCG +
Preference number: 5 (lower is better)
Translates to: SSFLPSPMNYFGLGLELAPYDAK*DLLGVA
Trigger: CGCGACTCCCAGAAGATCCAACTTCGCATCATAGGG...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp ATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGCCCTATGATGCGAAGTaGGATCTTCTGGGAGTCGCG +
Preference number: 5 (lower is better)
Translates to: MNYFGLGLELAFIPTARWPYDAK*DLLGVA
Trigger: CGCGACTCCCAGAAGATCCAACTTCGCATCATAGGG...CCATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCAAACGCAGCCTGTTaGCAGGCTGTGGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPNAAC*QAVGVK
Trigger: CTTCACACCCACAGCCTGCAAACAGGCTGCGTTTGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTCCAAACGCAGCCTGTTaGCAGGCTGTGGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: SLILAQNTSLIQQDLACPPNAAC*QAVGVK
Trigger: CTTCACACCCACAGCCTGCAAACAGGCTGCGTTTGG...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCAGGATCAAATCACAGTaGGCCAGCTCTGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFRIKSQ*ASSGWS
Trigger: CGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCT...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTAGGATCAAATCACAGTaGGCCAGCTCTGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: FQKITPFASQREEAKSPSRIKSQ*ASSGWS
Trigger: CGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCT...AGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCAGGATCAAATCACAGTaGGCCAGCTCTGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: CIPEDNSLCQPERGSQESRIKSQ*ASSGWS
Trigger: CGACCAGCCAGAGCTGGCCAACTGTGATTTGATCCT...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGCCAGAAGCGGTTACATaGGCCCACAGAGGCAACGAA +
Preference number: 5 (lower is better)
Translates to: VILATQKADTGESRTQETPEAVT*AHRGNE
Trigger: TTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGG...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATCCAGAAGCGGTTACATaGGCCCACAGAGGCAACGAA +
Preference number: 5 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNPEAVT*AHRGNE
Trigger: TTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGG...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp GAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTTTTGAAAGATCCGAGGCAAAGTTATaGGCATTGCCATGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: EAGNWLPLRLNTGWVFERSEAKL*ALPWQP
Trigger: CGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGA...TCTTTCAAAAACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCTCCGAGGCAAAGTTATaGGCATTGCCATGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFSEAKL*ALPWQP
Trigger: CGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGA...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp AGGGGCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTGCTGCTCATGCACTCTaGCTCCGAGGCAAAGTTATT +
Preference number: 5 (lower is better)
Translates to: RGSSLSLYRAGWSALHRCAAHAL*LRGKVI
Trigger: AATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGC...ACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCCCCAGGCTGTTGGTCTaGCCGCCAGAGACCACCAGA +
Preference number: 5 (lower is better)
Translates to: IALLENSSLWLCQRCKHCPRLLV*PPETTR
Trigger: TCTGGTGGTCTCTGGCGGCAAGACCAACAGCCTGGG...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GCTCCTCATTGTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGAAGCCAGATTTGCATGTaGGCCTCAGGAGGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: APHCHCTEQAGQLYTGVRSQICM*ASGGLQ
Trigger: TTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCT...TCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGACAATGAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCCAGATGGAGAGGGGCTCCTCATaGTCACTGTACAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: YELFWTGAGTSLHPYCQMERGSS*SLYRAG
Trigger: GCCTGCTCTGTACAGTGACAATGAGGAGCCCCTCTC...CATCTGGCAGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCGAGAGGGGCTCCTCATaGTCACTGTACAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPERGSS*SLYRAG
Trigger: GCCTGCTCTGTACAGTGACAATGAGGAGCCCCTCTC...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GTCACTGTACAGAGCAGGCTGGTCAGCTTTACACAGGTGTCAGATGAACCGTCATTCCCTGTTACTGCATaGCCCACAACCCTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: VTVQSRLVSFTQVSDEPSFPVTA*PTTLPH
Trigger: ATGGGGAAGGGTTGTGGGCAATGCAGTAACAGGGAA...TGACGGTTCATCTGACACCTGTGTAAAGCTGACCAGCCTGCTCTGTACAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp AACAGCTGGCACAGCAGAAGCTGGAGTAATACTCATTGCCACAAAGCTGGGCCTTTCCCTGTTACTGCATaGCCCACAACCCTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: NSWHSRSWSNTHCHKAGPFPVTA*PTTLPH
Trigger: ATGGGGAAGGGTTGTGGGCAATGCAGTAACAGGGAA...AGGCCCAGCTTTGTGGCAATGAGTATTACTCCAGCTTCTGCTGTGCCAGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTCAGTTCACACTTGTTaGGGGCGCTGTAGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: SSFLPSPMNYFGLGLELASVHTC*GRCSRA
Trigger: TGCCCTACTACAGCGCCCCAAACAAGTGTGAACTGA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCACCACCATACGACTTaGTGCAGCCAGCGTGATGGG +
Preference number: 5 (lower is better)
Translates to: NVFQKITPFASQREEAKSHHHTT*CSQRDG
Trigger: CCCATCACGCTGGCTGCACAAAGTCGTATGGTGGTG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp ATCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCCCCTATGATGCGAAGTaGGATCTTCTGGGAGTCGCG +
Preference number: 5 (lower is better)
Translates to: IADFSTEYFPDTAGLGMPPYDAK*DLLGVA
Trigger: CGCGACTCCCAGAAGATCCAACTTCGCATCATAGGG...GGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCAAACGCAGCCTGTTaGCAGGCTGTGGGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: NVFQKITPFASQREEAKSPNAAC*QAVGVK
Trigger: CTTCACACCCACAGCCTGCAAACAGGCTGCGTTTGG...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTGGTAACTGGCTGCCGTaGAGGCTAAACACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: NVFQKITPFASQREEAKSGNWLP*RLNTGW
Trigger: CCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACC...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACGGTAACTGGCTGCCGTaGAGGCTAAACACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LKTAACGYVRDANTAEGYGNWLP*RLNTGW
Trigger: CCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACC...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCAGAAGCGGTTACATaGGCCCACAGAGGCAACGAA +
Preference number: 5 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIPEAVT*AHRGNE
Trigger: TTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGG...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGCAAAGTTATTGGCATaGCCATGGCAGCCGCCATAC +
Preference number: 5 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFAKLLA*PWQPPY
Trigger: GTATGGCGGCTGCCATGGCAATGCCAATAACTTTGC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCCCCTGGCCCAGGCTGTaGGTCTTGCCGCCAGAGACC +
Preference number: 5 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCPWPRL*VLPPET
Trigger: GGTCTCTGGCGGCAAGACCAACAGCCTGGGCCAGGG...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GTAATCCTAGCTACTCAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGAGCCAGATTTGCATGTaGGCCTCAGGAGGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: VILATQKADTGESRTQETSQICM*ASGGLQ
Trigger: TTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCT...CGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTGAGTAGCTAGGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTAGCCAGATTTGCATGTaGGCCTCAGGAGGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: PSPMNYFGLGLELAFIPTSQICM*ASGGLQ
Trigger: TTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCT...AGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTCACCTTTCAGAGCTTaGGTCCCTGTAATGCCCGTC +
Preference number: 5 (lower is better)
Translates to: SSFLPSPMNYFGLGLELASPFRA*VPVMPV
Trigger: GACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CAGAAGGCTGACACAGGAGAATCAAGAACCCAGGAGACGGAGGTTGCAGTGAGCACACTGGGTGGGTTTTaGAAAGAGCTAATGTATTCC +
Preference number: 5 (lower is better)
Translates to: QKADTGESRTQETEVAVSTLGGF*KELMYS
Trigger: GGAATACATTAGCTCTTTCAAAAACCCACCCAGTGT...GCTCACTGCAACCTCCGTCTCCTGGGTTCTTGATTCTCCTGTGTCAGCCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGTAACTGGCTGCCGTaGAGGCTAAACACTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LFLKTAACGYVRDANTAEGNWLP*RLNTGW
Trigger: CCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACC...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTAACAGATTGCTCTTCTaGAAAACAGCAGCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVNRLLF*KTAACG
Trigger: ACCACAGGCTGCTGTTTTCAAGAAGAGCAATCTGTT...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TGGAGTAATACTCATTGCCACAAAGCTGGGCCTGCAGGATCAAATCACAGTTGGGCAAAGTTATTGGCATaGCCATGGCAGCCGCCATAC +
Preference number: 5 (lower is better)
Translates to: WSNTHCHKAGPAGSNHSWAKLLA*PWQPPY
Trigger: GTATGGCGGCTGCCATGGCAATGCCAATAACTTTGC...CCAACTGTGATTTGATCCTGCAGGCCCAGCTTTGTGGCAATGAGTATTACTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CAA 90 bp TCGCTGATTTTAGCACAGAATACTTCCCTGATACAGCAGGACTTGGCATGCCCTGCAAAGTTATTGGCATaGCCATGGCAGCCGCCATAC +
Preference number: 5 (lower is better)
Translates to: SLILAQNTSLIQQDLACPAKLLA*PWQPPY
Trigger: GTATGGCGGCTGCCATGGCAATGCCAATAACTTTGC...AGGGCATGCCAAGTCCTGCTGTATCAGGGAAGTATTCTGTGCTAAAATCAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp CCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTGCTGCTCATGCACTCTaGCTCCGAGGCAAAGTTATT +
Preference number: 5 (lower is better)
Translates to: PSPMNYFGLGLELAFIPTAAHAL*LRGKVI
Trigger: AATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGC...AGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555123.5
ENST00000557061.5
CDS-3UTR CAA 90 bp TCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCGCTGCTCATGCACTCTaGCTCCGAGGCAAAGTTATT +
Preference number: 5 (lower is better)
Translates to: SFLPSPMNYFGLGLELAFAAHAL*LRGKVI
Trigger: AATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGC...GAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp ACTGAGAAGTATCACTCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGGCTGCTCATGCACTCTaGCTCCGAGGCAAAGTTATT +
Preference number: 5 (lower is better)
Translates to: TEKYHSPVMWFVPFPASVAAHAL*LRGKVI
Trigger: AATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGC...CACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGAGTGATACTTCTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTCACCACCATACGACTTaGTGCAGCCAGCGTGATGGG +
Preference number: 5 (lower is better)
Translates to: SFLCPGITFATRQSSERFHHHTT*CSQRDG
Trigger: CCCATCACGCTGGCTGCACAAAGTCGTATGGTGGTG...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CAA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGTGGGGCTGGTGGGTGTaGTGGACTGTAGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: FPIAILILLMLFLMTDSLWGWWV*WTVEAT
Trigger: AGTGGCTTCTACAGTCCACAACACCCACCAGCCCCA...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS-3UTR CAA 90 bp CATCTATTCCATTTTGCCAACAAGGGTTATGCTGTTAACCCTCTGCACCAGATTGCCAAGATCGCACCATaGTACTCCAGCCTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: HLFHFANKGYAVNPLHQIAKIAP*YSSLGK
Trigger: CTTGCCCAGGCTGGAGTACAATGGTGCGATCTTGGC...AATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGAATAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTCCAGAAGCGGTTACATaGGCCCACAGAGGCAACGAA +
Preference number: 5 (lower is better)
Translates to: LLFLKTAACGYVRDANTAPEAVT*AHRGNE
Trigger: TTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGG...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGGCTACGCAAAGTTATTGGCATaGCCATGGCAGCCGCCATAC +
Preference number: 5 (lower is better)
Translates to: LKTAACGYVRDANTAEGYAKLLA*PWQPPY
Trigger: GTATGGCGGCTGCCATGGCAATGCCAATAACTTTGC...GTAGCCTTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTTCCGAGGCAAAGTTATaGGCATTGCCATGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: LLFLKTAACGYVRDANTASEAKL*ALPWQP
Trigger: CGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGA...AGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCGCTGCTCATGCACTCTaGCTCCGAGGCAAAGTTATT +
Preference number: 5 (lower is better)
Translates to: FLPSPMNYFGLGLELAFIAAHAL*LRGKVI
Trigger: AATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGC...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp AAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTGCTGCTCATGCACTCTaGCTCCGAGGCAAAGTTATT +
Preference number: 5 (lower is better)
Translates to: KITPFASQREEAKSPSSFAAHAL*LRGKVI
Trigger: AATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGC...AAAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TTCACACTTTCTCCTGCTACCACACACAATAGCCTGGCCGTATCACCCTCTGGCAAAGTGGAAAGGGACTaGGAAGCTCATAGAATCCAT +
Preference number: 5 (lower is better)
Translates to: FTLSPATTHNSLAVSPSGKVERD*EAHRIH
Trigger: ATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT...GCCAGAGGGTGATACGGCCAGGCTATTGTGTGTGGTAGCAGGAGAAAGTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557061.5
CDS-3UTR CAA 90 bp TCACCCGTGATGTGGTTTGTCCCTTTTCCAGCCAGTGTGTTGGTAATAAAAGTCTCACCTTTCAGAGCTTaGGTCCCTGTAATGCCCGTC +
Preference number: 5 (lower is better)
Translates to: SPVMWFVPFPASVLVIKVSPFRA*VPVMPV
Trigger: GACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA...GACTTTTATTACCAACACACTGGCTGGAAAAGGGACAAACCACATCACGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CAGGTGTCAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTTTCCAGCCAGTGTGTaGGTAATAAAAGTCACCTTT +
Preference number: 5 (lower is better)
Translates to: QVSDEPSQPDLHVGLRRAFPASV*VIKVTF
Trigger: AAAGGTGACTTTTATTACCAACACACTGGCTGGAAA...AGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTGACACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAATCAGTTCACACTTGTTaGGGGCGCTGTAGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: LFLKTAACGYVRDANTAESVHTC*GRCSRA
Trigger: TGCCCTACTACAGCGCCCCAAACAAGTGTGAACTGA...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS-3UTR CAA 90 bp CAAACATTTTGCTTCACAGATTCCTACTTAAGGAAGAGAGGGGCTCCTCATTGTCCCTATGATGCGAAGTaGGATCTTCTGGGAGTCGCG +
Preference number: 5 (lower is better)
Translates to: QTFCFTDSYLRKRGAPHCPYDAK*DLLGVA
Trigger: CGCGACTCCCAGAAGATCCAACTTCGCATCATAGGG...ACAATGAGGAGCCCCTCTCTTCCTTAAGTAGGAATCTGTGAAGCAAAATGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTAACAGATTGCTCTTCTaGAAAACAGCAGCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: EDNSLCQPERGSQESIFLNRLLF*KTAACG
Trigger: ACCACAGGCTGCTGTTTTCAAGAAGAGCAATCTGTT...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCAACAGATTGCTCTTCTaGAAAACAGCAGCCTGTGGT +
Preference number: 5 (lower is better)
Translates to: SSFLPSPMNYFGLGLELANRLLF*KTAACG
Trigger: ACCACAGGCTGCTGTTTTCAAGAAGAGCAATCTGTT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp ATTGCTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCGCAAAGTTATTGGCATaGCCATGGCAGCCGCCATAC +
Preference number: 5 (lower is better)
Translates to: IALLENSSLWLCQRCKHCAKLLA*PWQPPY
Trigger: GTATGGCGGCTGCCATGGCAATGCCAATAACTTTGC...GCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAAGCAAAGTTATTGGCATaGCCATGGCAGCCGCCATAC +
Preference number: 5 (lower is better)
Translates to: LFLKTAACGYVRDANTAEAKLLA*PWQPPY
Trigger: GTATGGCGGCTGCCATGGCAATGCCAATAACTTTGC...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTCTGTCCGAGGCAAAGTTATaGGCATTGCCATGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: FPIAILILLMLFLMTDSLSEAKL*ALPWQP
Trigger: CGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGA...CAGACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000644200.2
CDS-3UTR CAA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTCTGATACAGCAGGACTaGGCATGCCCTTTAGAAAAC +
Preference number: 5 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLLIQQD*ACPLEN
Trigger: GTTTTCTAAAGGGCATGCCAAGTCCTGCTGTATCAG...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CAGATGAACCGTCACAGCCAGATTTGCATGTTGGCCTCAGGAGGGCTTCAAGGTAACATCTATTCCATTTaGCCAACAAGGGTTATGCTG +
Preference number: 5 (lower is better)
Translates to: QMNRHSQICMLASGGLQGNIYSI*PTRVML
Trigger: CAGCATAACCCTTGTTGGCAAAATGGAATAGATGTT...ACCTTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCTGTGACGGTTCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CTACAGAGAGAAGCTGGTAACTGGCTGCCGTTGAGGCTAAACACTGGGTGGGTTAACATCTATTCCATTTaGCCAACAAGGGTTATGCTG +
Preference number: 5 (lower is better)
Translates to: LQREAGNWLPLRLNTGWVNIYSI*PTRVML
Trigger: CAGCATAACCCTTGTTGGCAAAATGGAATAGATGTT...AACCCACCCAGTGTTTAGCCTCAACGGCAGCCAGTTACCAGCTTCTCTCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CCCTTCCCCATTGCTATCCTCATCCTGCTAATGCTGTTTTTAATGACTGACAGTTTCCCTGTTACTGCATaGCCCACAACCCTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: PFPIAILILLMLFLMTDSFPVTA*PTTLPH
Trigger: ATGGGGAAGGGTTGTGGGCAATGCAGTAACAGGGAA...ACTGTCAGTCATTAAAAACAGCATTAGCAGGATGAGGATAGCAATGGGGAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS TCA 90 bp CTTCCCAAATCCTTCATTAATATGATCCAGTCCCAGGAGTCATCTTaGCCAGAACCCACACCTGTGAGGTATACAGGGCAGAAGGTAATG +
Preference number: 5 (lower is better)
Translates to: LPKSFINMIQSQESS*PEPTPVRYTGQKVM
Trigger: CATTACCTTCTGCCCTGTATACCTCACAGGTGTGGGTTCTGGTCAAGATGACTCCTGGGACTGGATCATATTAATGAAGGATTTGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS-3UTR CAA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCACACTGGGTGGGTTTTaGAAAGAGCTAATGTATTCC +
Preference number: 5 (lower is better)
Translates to: CIPEDNSLCQPERGSQESTLGGF*KELMYS
Trigger: GGAATACATTAGCTCTTTCAAAAACCCACCCAGTGT...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTACACTGGGTGGGTTTTaGAAAGAGCTAATGTATTCC +
Preference number: 5 (lower is better)
Translates to: EDNSLCQPERGSQESIFLTLGGF*KELMYS
Trigger: GGAATACATTAGCTCTTTCAAAAACCCACCCAGTGT...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TCTTCCTTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCACACTGGGTGGGTTTTaGAAAGAGCTAATGTATTCC +
Preference number: 5 (lower is better)
Translates to: SSFLPSPMNYFGLGLELATLGGF*KELMYS
Trigger: GGAATACATTAGCTCTTTCAAAAACCCACCCAGTGT...GGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAAGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCCCTACTAAAGTGGAAAGGGACTaGGAAGCTCATAGAATCCAT +
Preference number: 5 (lower is better)
Translates to: PSPMNYFGLGLELAFIPTKVERD*EAHRIH
Trigger: ATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT...AGTAGGGATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557061.5
ENST00000559759.1
CDS-3UTR CAA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCTCACCTTTCAGAGCTTaGGTCCCTGTAATGCCCGTC +
Preference number: 5 (lower is better)
Translates to: KVERDLEAHRIHASSFSISPFRA*VPVMPV
Trigger: GACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CATCTATTCCATTTTGCCAACAAGGGTTATGCTGTTAACCCTCTGCACCAGATTTCACCTTTCAGAGCTTaGGTCCCTGTAATGCCCGTC +
Preference number: 5 (lower is better)
Translates to: HLFHFANKGYAVNPLHQISPFRA*VPVMPV
Trigger: GACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA...AATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGAATAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CTCTTCTTGAAAACAGCAGCCTGTGGTTATGTCAGAGATGCAAACACTGCTGAACTGATACAGCAGGACTaGGCATGCCCTTTAGAAAAC +
Preference number: 5 (lower is better)
Translates to: LFLKTAACGYVRDANTAELIQQD*ACPLEN
Trigger: GTTTTCTAAAGGGCATGCCAAGTCCTGCTGTATCAG...TTCAGCAGTGTTTGCATCTCTGACATAACCACAGGCTGCTGTTTTCAAGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TCACCTTTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACATCTATTCCATTTaGCCAACAAGGGTTATGCTG +
Preference number: 5 (lower is better)
Translates to: SPFRALVPVMPVFPVSRNNIYSI*PTRVML
Trigger: CAGCATAACCCTTGTTGGCAAAATGGAATAGATGTT...ATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCTTGGCAGCAAACATTTaGCTTCACAGATTCCTACTT +
Preference number: 5 (lower is better)
Translates to: CIPEDNSLCQPERGSQESLAANI*LHRFLL
Trigger: AAGTAGGAATCTGTGAAGCAAAATGTTTGCTGCCAA...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TTCAGAGCTTTGGTCCCTGTAATGCCCGTCTTTCCTGTGTCCAGGAATAACCTTAAAGTGGAAAGGGACTaGGAAGCTCATAGAATCCAT +
Preference number: 5 (lower is better)
Translates to: FRALVPVMPVFPVSRNNLKVERD*EAHRIH
Trigger: ATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT...AAGGTTATTCCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCTTTCCAGCCAGTGTGTaGGTAATAAAAGTCACCTTT +
Preference number: 5 (lower is better)
Translates to: CIPEDNSLCQPERGSQESFPASV*VIKVTF
Trigger: AAAGGTGACTTTTATTACCAACACACTGGCTGGAAA...GGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp GAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTCCATCTTCCTTTTTCCAGCCAGTGTGTaGGTAATAAAAGTCACCTTT +
Preference number: 5 (lower is better)
Translates to: EDNSLCQPERGSQESIFLFPASV*VIKVTF
Trigger: AAAGGTGACTTTTATTACCAACACACTGGCTGGAAA...AAGGAAGATGGACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CATCTATTCCATTTTGCCAACAAGGGTTATGCTGTTAACCCTCTGCACCAGATTCTGATACAGCAGGACTaGGCATGCCCTTTAGAAAAC +
Preference number: 5 (lower is better)
Translates to: HLFHFANKGYAVNPLHQILIQQD*ACPLEN
Trigger: GTTTTCTAAAGGGCATGCCAAGTCCTGCTGTATCAG...AATCTGGTGCAGAGGGTTAACAGCATAACCCTTGTTGGCAAAATGGAATAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp CAGCTGTTTCATCCCAAATCCCTATTTGAGGTCTTAACATCTATTCCATTTTGCAGCCAGATTTGCATGTaGGCCTCAGGAGGGCTTCAA +
Preference number: 5 (lower is better)
Translates to: QLFHPKSLFEVLTSIPFCSQICM*ASGGLQ
Trigger: TTGAAGCCCTCCTGAGGCCAACATGCAAATCTGGCT...GCAAAATGGAATAGATGTTAAGACCTCAAATAGGGATTTGGGATGAAACAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TTTCTCCCTAGCCCTATGAACTATTTTGGACTGGGGCTGGAACTAGCCTTCATCTTGGCAGCAAACATTTaGCTTCACAGATTCCTACTT +
Preference number: 5 (lower is better)
Translates to: FLPSPMNYFGLGLELAFILAANI*LHRFLL
Trigger: AAGTAGGAATCTGTGAAGCAAAATGTTTGCTGCCAA...GATGAAGGCTAGTTCCAGCCCCAGTCCAAAATAGTTCATAGGGCTAGGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTAACATCTATTCCATTTaGCCAACAAGGGTTATGCTG +
Preference number: 5 (lower is better)
Translates to: NVFQKITPFASQREEAKSNIYSI*PTRVML
Trigger: CAGCATAACCCTTGTTGGCAAAATGGAATAGATGTT...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp AATGTATTCCAGAAGATAACTCCCTTTGCCAGCCAGAGAGAGGAAGCCAAGAGTTTGGCAGCAAACATTTaGCTTCACAGATTCCTACTT +
Preference number: 5 (lower is better)
Translates to: NVFQKITPFASQREEAKSLAANI*LHRFLL
Trigger: AAGTAGGAATCTGTGAAGCAAAATGTTTGCTGCCAA...ACTCTTGGCTTCCTCTCTCTGGCTGGCAAAGGGAGTTATCTTCTGGAATACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp TCTTTCCTGTGTCCAGGAATAACCTTTGCTACTAGGCAGTCCTCTGAAAGATTTAAAGTGGAAAGGGACTaGGAAGCTCATAGAATCCAT +
Preference number: 5 (lower is better)
Translates to: SFLCPGITFATRQSSERFKVERD*EAHRIH
Trigger: ATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT...AAATCTTTCAGAGGACTGCCTAGTAGCAAAGGTTATTCCTGGACACAGGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS-3UTR CAA 90 bp AAAGTGGAAAGGGACTTGGAAGCTCATAGAATCCATGCCTCTTCTTTTAGCATCTTGGCAGCAAACATTTaGCTTCACAGATTCCTACTT +
Preference number: 5 (lower is better)
Translates to: KVERDLEAHRIHASSFSILAANI*LHRFLL
Trigger: AAGTAGGAATCTGTGAAGCAAAATGTTTGCTGCCAA...GATGCTAAAAGAAGAGGCATGGATTCTATGAGCTTCCAAGTCCCTTTCCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340738.9
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS GCA 72 bp CCGCATCTCAGCCTGTCTTCGCTGGCGCCGGGAGGCTaGAGCCAGGGCCGCTCCGTCGGTGCCCGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: PHLSLSSLAPGG*SQGRSVGARPG
Trigger: GCCTGGGCGGGCACCGACGGAGCGGCCCTGGCTGCAGCCTCCCGGCGCCAGCGAAGACAGGCTGAGATGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000644200.2
CDS CCA 72 bp GCGCCGTCGGGGCAGCTCTCCGTGCGACAAGAGCGGTaGCTCCGGGCGGGGCCCACGCAGCTGGAGCCTCCA +
Preference number: 6 (lower is better)
Translates to: APSGQLSVRQER*LRAGPTQLEPP
Trigger: TGGAGGCTCCAGCTGCGTGGGCCCCGCCCGGAGCCACCGCTCTTGTCGCACGGAGAGCTGCCCCGACGGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp CCGCCACACTCCGCGCTGCAGTCACTCCATGAGCCGTaGCTCCAGCTGAAGCCGGGGCTGGGGCGGCGCAGG +
Preference number: 6 (lower is better)
Translates to: PPHSALQSLHEP*LQLKPGLGRRR
Trigger: CCTGCGCCGCCCCAGCCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTGACTGCAGCGCGGAGTGTGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CAA 72 bp CTCCAGGGTCCCCAGGTGTCACTCTGCCGCCTCACCTaGGGAGCCGAGGACCCGGGCGCTGGAGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LQGPQVSLCRLT*GAEDPGAGASS
Trigger: GCTGCTGGCTCCAGCGCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGGACCCTGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS TCA 72 bp GTGACCTCCGCCACACTCCGCGCTGCAGTCACTCCATaGGCCGTGGCTCCAGCTGAAGCCGGGGCTGGGGCG +
Preference number: 6 (lower is better)
Translates to: VTSATLRAAVTP*AVAPAEAGAGA
Trigger: CGCCCCAGCCCCGGCTTCAGCTGGAGCCACGGCTCATGGAGTGACTGCAGCGCGGAGTGTGGCGGAGGTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp TCCAGGGTCCCCAGGTGTCACTCTGCCGCCTCACCTTaGGAGCCGAGGACCCGGGCGCTGGAGCCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: SRVPRCHSAASP*EPRTRALEPAA
Trigger: TGCTGCTGGCTCCAGCGCCCGGGTCCTCGGCTCCCAAGGTGAGGCGGCAGAGTGACACCTGGGGACCCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp GCTCCCGCAGCTGTCCTGGGCGCGGGCGAGAGTGTGTaGGCGCGTCTCTCCCTATGGCCCACAGGTGACCAG +
Preference number: 6 (lower is better)
Translates to: APAAVLGAGESV*ARLSLWPTGDQ
Trigger: CTGGTCACCTGTGGGCCATAGGGAGAGACGCGCCCACACACTCTCGCCCGCGCCCAGGACAGCTGCGGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS TCA 72 bp GGCTCCCGCAGTGGCTGGGCGGCCCAATGGCACAGATaGCCTGTCGCCTCCGAGTGCCCGAGCTGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: GSRSGWAAQWHR*PVASECPSCSS
Trigger: AGAGCTGCAGCTCGGGCACTCGGAGGCGACAGGTCATCTGTGCCATTGGGCCGCCCAGCCACTGCGGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 72 bp CCACGGCCTCCTGGATGCCGGCCCCGTCAGACGAGATaGAGTACACGGAGCGGGACTGGGAGCCTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: PRPPGCRPRQTR*STRSGTGSLLH
Trigger: GTGGAGGAGGCTCCCAGTCCCGCTCCGTGTACTGCATCTCGTCTGACGGGGCCGGCATCCAGGAGGCCGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 72 bp GCCCGGCACACTCAGCCTCCTCCACGGCCTCCTGGATaGCGGCCCCGTCAGACGAGATGCAGTACACGGAGC +
Preference number: 6 (lower is better)
Translates to: ARHTQPPPRPPG*RPRQTRCSTRS
Trigger: GCTCCGTGTACTGCATCTCGTCTGACGGGGCCGGCATCCAGGAGGCCGTGGAGGAGGCTGAGTGTGCCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 72 bp GGCCCCTGTCCTGTGCTGGCTGGGTTCCTGCTCGCCTaGAGGACTGCTGCCGCCACCATCCGTGTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: GPCPVLAGFLLA*RTAAATIRVGA
Trigger: AGCACCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS CCA 72 bp GCTTTCTCTGCACCGCGGCCCCTGTCCTGTGCTGGCTaGGTTCCTGCTCGCCTGCAGGACTGCTGCCGCCAC +
Preference number: 6 (lower is better)
Translates to: AFSAPRPLSCAG*VPARLQDCCRH
Trigger: GTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGCCGCGGTGCAGAGAAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS CCA 72 bp CAGGGCTTTCTCTGCACCGCGGCCCCTGTCCTGTGCTaGCTGGGTTCCTGCTCGCCTGCAGGACTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: QGFLCTAAPVLC*LGSCSPAGLLP
Trigger: CGGCAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGACAGGGGCCGCGGTGCAGAGAAAGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS TCA 72 bp GGCCCTGCCTTCCAGCGCTTGGTCTCCGGGCAAGGGTaGAGATTGCAGGAACGCCGGTCAGCTGGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: GPAFQRLVSGQG*RLQERRSAGRG
Trigger: GCCACGGCCAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGACCAAGCGCTGGAAGGCAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS TCA 72 bp GAGTGTGTGGGCGCGTCTCTCCCTATGGCCCACAGGTaGCCAGGAGACCCGCAACAGGACAGCCGGGTGCGC +
Preference number: 6 (lower is better)
Translates to: ECVGASLPMAHR*PGDPQQDSRVR
Trigger: GCGCACCCGGCTGTCCTGTTGCGGGTCTCCTGGTCACCTGTGGGCCATAGGGAGAGACGCGCCCACACACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS GCA 72 bp AGTCGCGGCCTGGCCGGGTGCTGCCACAGCTGTAGGTaGCCGCGTCCTCTGCCTGTAGGAGGAGCTGTGGAA +
Preference number: 6 (lower is better)
Translates to: SRGLAGCCHSCR*PRPLPVGGAVE
Trigger: TTCCACAGCTCCTCCTACAGGCAGAGGACGCGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCGACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554314.1
CDS CCA 72 bp GGCGCGGGCGAGAGTGTGTGGGCGCGTCTCTCCCTATaGCCCACAGGTGACCAGGAGACCCGCAACAGGACA +
Preference number: 6 (lower is better)
Translates to: GAGESVWARLSL*PTGDQETRNRT
Trigger: TGTCCTGTTGCGGGTCTCCTGGTCACCTGTGGGCCATAGGGAGAGACGCGCCCACACACTCTCGCCCGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554301.5
ENST00000555445.5
CDS GCA 72 bp CCTTCCAGCGCTTGGTCTCCGGGCAAGGGTGAAGATTaGAGGAACGCCGGTCAGCTGGCCGTGGCTGGCGCT +
Preference number: 6 (lower is better)
Translates to: PSSAWSPGKGED*RNAGQLAVAGA
Trigger: AGCGCCAGCCACGGCCAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCCCGGAGACCAAGCGCTGGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 72 bp TCCTGTGCTGGCTGGGTTCCTGCTCGCCTGCAGGACTaGTGCCGCCACCATCCGTGTGGGTGCTCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: SCAGWVPARLQD*CRHHPCGCSFQ
Trigger: CTGGAAGGAGCACCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS GCA 72 bp TCTCCACCCAGTCCAGGGGCCCTGGACCCAAGCTCCTaGCCCCATGGCCATTCTCCAAAGGCCTGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: SPPSPGALDPSS*PHGHSPKAWVW
Trigger: CCACACCCAGGCCTTTGGAGAATGGCCATGGGGGCAGGAGCTTGGGTCCAGGGCCCCTGGACTGGGTGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS GCA 72 bp GTTGGATCTTCTGGGAGTCGCGGCCTGGCCGGGTGCTaGCACAGCTGTAGGTGCCCGCGTCCTCTGCCTGTA +
Preference number: 6 (lower is better)
Translates to: VGSSGSRGLAGC*HSCRCPRPLPV
Trigger: TACAGGCAGAGGACGCGGGCACCTACAGCTGTGGCAGCACCCGGCCAGGCCGCGACTCCCAGAAGATCCAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554314.1
CDS CCA 72 bp CGGGCAAGGGTGAAGATTGCAGGAACGCCGGTCAGCTaGCCGTGGCTGGCGCTGGCACATGTGGTCGGGGTA +
Preference number: 6 (lower is better)
Translates to: RARVKIAGTPVS*PWLALAHVVGV
Trigger: TACCCCGACCACATGTGCCAGCGCCAGCCACGGCCAGCTGACCGGCGTTCCTGCAATCTTCACCCTTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp TCCAGGCTGCACAGCGCTGCAGGTTACAGGCCTGAATaGCAGGGGGCTTCCCAGGCAGCCCGGCACACTCAG +
Preference number: 6 (lower is better)
Translates to: SRLHSAAGYRPE*QGASQAARHTQ
Trigger: CTGAGTGTGCCGGGCTGCCTGGGAAGCCCCCTGCCATTCAGGCCTGTAACCTGCAGCGCTGTGCAGCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 72 bp GGCACATGTGGTCGGGGTAGGCCTCATGGTCGATGGTaGAGAACACCAGGCGGGACTGGTGACCTCCGCCAC +
Preference number: 6 (lower is better)
Translates to: GTCGRGRPHGRW*RTPGGTGDLRH
Trigger: GTGGCGGAGGTCACCAGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCTACCCCGACCACATGTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 72 bp TGTGCTGGCTGGGTTCCTGCTCGCCTGCAGGACTGCTaGCGCCACCATCCGTGTGGGTGCTCCTTCCAGAAG +
Preference number: 6 (lower is better)
Translates to: CAGWVPARLQDC*RHHPCGCSFQK
Trigger: CTTCTGGAAGGAGCACCCACACGGATGGTGGCGGCAGCAGTCCTGCAGGCGAGCAGGAACCCAGCCAGCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS CCA 72 bp GCTGGCACATGTGGTCGGGGTAGGCCTCATGGTCGATaGTGCAGAACACCAGGCGGGACTGGTGACCTCCGC +
Preference number: 6 (lower is better)
Translates to: AGTCGRGRPHGR*CRTPGGTGDLR
Trigger: GCGGAGGTCACCAGTCCCGCCTGGTGTTCTGCACCATCGACCATGAGGCCTACCCCGACCACATGTGCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp ACATCCACAGGCTTGGAGTGCTGCAGGCTCCCGCAGTaGCTGGGCGGCCCAATGGCACAGATGACCTGTCGC +
Preference number: 6 (lower is better)
Translates to: TSTGLECCRLPQ*LGGPMAQMTCR
Trigger: GCGACAGGTCATCTGTGCCATTGGGCCGCCCAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGATGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp CTGGTGATCCGGCATCTCCACCCAGTCCAGGGGCCCTaGACCCAAGCTCCTGCCCCCATGGCCATTCTCCAA +
Preference number: 6 (lower is better)
Translates to: LVIRHLHPVQGP*TQAPAPMAILQ
Trigger: TTGGAGAATGGCCATGGGGGCAGGAGCTTGGGTCCAGGGCCCCTGGACTGGGTGGAGATGCCGGATCACCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000559759.1
ENST00000644200.2
CDS GCA 72 bp GTAGCCTCGGCTGAGGTCATTAGCGTCAAAGGTGCCTaGGACGGGGTAGCAGGTCGTGCCGTCACCCCCACA +
Preference number: 6 (lower is better)
Translates to: VASAEVISVKGA*DGVAGRAVTPT
Trigger: TGTGGGGGTGACGGCACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCTAATGACCTCAGCCGAGGCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000554301.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 72 bp GTGTTACAAGGCTCCACATCCACAGGCTTGGAGTGCTaGAGGCTCCCGCAGTGGCTGGGCGGCCCAATGGCA +
Preference number: 6 (lower is better)
Translates to: VLQGSTSTGLEC*RLPQWLGGPMA
Trigger: TGCCATTGGGCCGCCCAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGATGTGGAGCCTTGTAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 72 bp TGCGTGTTACAAGGCTCCACATCCACAGGCTTGGAGTaGTGCAGGCTCCCGCAGTGGCTGGGCGGCCCAATG +
Preference number: 6 (lower is better)
Translates to: CVLQGSTSTGLE*CRLPQWLGGPM
Trigger: CATTGGGCCGCCCAGCCACTGCGGGAGCCTGCAGCACTCCAAGCCTGTGGATGTGGAGCCTTGTAACACGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS GCA 72 bp CACAGCTCGGCTGAGGTCATTAGCGTCAAAGGTGCCTaGGACGGGGTAGCAGGTCGTGCCGTCACCCCCACA +
Preference number: 6 (lower is better)
Translates to: HSSAEVISVKGA*DGVAGRAVTPT
Trigger: TGTGGGGGTGACGGCACGACCTGCTACCCCGTCGCAGGCACCTTTGACGCTAATGACCTCAGCCGAGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000555123.5
CDS GCA 72 bp CCATCTGGGGACTGGTGGACACGGTGGCCATCAGCCTaGACAGGTAGCCCGTTCCTGGAGGAGAGAGGACAC +
Preference number: 6 (lower is better)
Translates to: PSGDWWTRWPSA*TGSPFLEERGH
Trigger: GTGTCCTCTCTCCTCCAGGAACGGGCTACCTGTGCAGGCTGATGGCCACCGTGTCCACCAGTCCCCAGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554527.1
CDS GCA 72 bp GGATGCTTCCACCAGAGTCTGTCCACTGTGCAGACCTaGCCCCGGCTGGTGCCACAGCAGCCTTCACCCACA +
Preference number: 6 (lower is better)
Translates to: GCFHQSLSTVQT*PRLVPQQPSPT
Trigger: TGTGGGTGAAGGCTGCTGTGGCACCAGCCGGGGGCAGGTCTGCACAGTGGACAGACTCTGGTGGAAGCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS GCA 72 bp GGGATCCAGGATGCTTCCACCAGAGTCTGTCCACTGTaGAGACCTGCCCCCGGCTGGTGCCACAGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: GIQDASTRVCPL*RPAPGWCHSSL
Trigger: AAGGCTGCTGTGGCACCAGCCGGGGGCAGGTCTGCACAGTGGACAGACTCTGGTGGAAGCATCCTGGATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS GCA 72 bp CTGTCTGGGGGCCTGACCTGGCCCTGGGATCCAGGATaGTTCCACCAGAGTCTGTCCACTGTGCAGACCTGC +
Preference number: 6 (lower is better)
Translates to: LSGGLTWPWDPG*FHQSLSTVQTC
Trigger: GCAGGTCTGCACAGTGGACAGACTCTGGTGGAAGCATCCTGGATCCCAGGGCCAGGTCAGGCCCCCAGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS CCA 72 bp GGGGCAGTCCTCATGCACACAGGGCTCAGTCAGAGGTaGCCGGTCTTCCAAGGAGCACGCTGCGGTATGGAG +
Preference number: 6 (lower is better)
Translates to: GAVLMHTGLSQR*PVFQGARCGME
Trigger: CTCCATACCGCAGCGTGCTCCTTGGAAGACCGGCCACCTCTGACTGAGCCCTGTGTGCATGAGGACTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp TTGTCTGGGCGTCCTAACCCCCTCACCTGGGGAAGGTaGGCCTCACCTGTAGGAGGAGCTGTGGAAGGGTGG +
Preference number: 6 (lower is better)
Translates to: LSGRPNPLTWGR*ASPVGGAVEGW
Trigger: CCACCCTTCCACAGCTCCTCCTACAGGTGAGGCCCACCTTCCCCAGGTGAGGGGGTTAGGACGCCCAGACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS CCA 72 bp GCATGCTCCTTGTCTGGGCGTCCTAACCCCCTCACCTaGGGAAGGTGGGCCTCACCTGTAGGAGGAGCTGTG +
Preference number: 6 (lower is better)
Translates to: ACSLSGRPNPLT*GRWASPVGGAV
Trigger: CACAGCTCCTCCTACAGGTGAGGCCCACCTTCCCCAGGTGAGGGGGTTAGGACGCCCAGACAAGGAGCATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS GCA 72 bp CTGCAGCTCTTGGAGCATAGACCCCAGGTGCCAACATaGCAGGCCTGGTCACTGAGGAGGGGGCAGTCCTCA +
Preference number: 6 (lower is better)
Translates to: LQLLEHRPQVPT*QAWSLRRGQSS
Trigger: TGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGGCATGTTGGCACCTGGGGTCTATGCTCCAAGAGCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp CGTCACCCCCACACCGCAGACACTTGTCCTCCTGCTTaGACGAGTCCAGCTCGTGATCACAGCCGACAACCC +
Preference number: 6 (lower is better)
Translates to: RHPHTADTCPPA*TSPARDHSRQP
Trigger: GGGTTGTCGGCTGTGATCACGAGCTGGACTCGTCCAAGCAGGAGGACAAGTGTCTGCGGTGTGGGGGTGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555035.1
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp GGCCCACACAGCCTTCCCCAAGAGGACCGGCTGCAGTaGCCACGTTGTCATAGCAACAGCCAAACTGGGAGC +
Preference number: 6 (lower is better)
Translates to: GPHSLPQEDRLQ*PRCHSNSQTGS
Trigger: GCTCCCAGTTTGGCTGTTGCTATGACAACGTGGCCACTGCAGCCGGTCCTCTTGGGGAAGGCTGTGTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000557061.5
ENST00000644200.2
CDS CCA 72 bp TGCACAGGTAGCCCGTTCCTGGAGGAGAGAGGACACTaGGAGAGCCATCAAGGGCCTCTGGAGGTCTGGGAG +
Preference number: 6 (lower is better)
Translates to: CTGSPFLEERGH*ESHQGPLEVWE
Trigger: CTCCCAGACCTCCAGAGGCCCTTGATGGCTCTCCCAGTGTCCTCTCTCCTCCAGGAACGGGCTACCTGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554527.1
CDS TCA 72 bp GCAGGGCCCGGGCCGCCTCGATGGTCCAGTGCCCATTaGGGTAGTATTCCCCACGAACATTCTTCACAGCCA +
Preference number: 6 (lower is better)
Translates to: AGPGPPRWSSAH*GSIPHEHSSQP
Trigger: TGGCTGTGAAGAATGTTCGTGGGGAATACTACCTCAATGGGCACTGGACCATCGAGGCGGCCCGGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216658.9
ENST00000554301.5
ENST00000555445.5
ENST00000644200.2
CDS TCA 72 bp GTGCTGTCACCACCATACGACTTTGTGCAGCCAGCGTaGTGGGGCCCCTCAGCGACAGATACCCTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: VLSPPYDFVQPA*WGPSATDTLSG
Trigger: CCCTGACAGGGTATCTGTCGCTGAGGGGCCCCATCACGCTGGCTGCACAAAGTCGTATGGTGGTGACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS TCA 72 bp GCAGGGCCCGGGCCGCCTCGATGGTCCAGTGCCCATTaGGGTAGTATTCCCCACGAACATTCTTCACAGCTC +
Preference number: 6 (lower is better)
Translates to: AGPGPPRWSSAH*GSIPHEHSSQL
Trigger: GAGCTGTGAAGAATGTTCGTGGGGAATACTACCTCAATGGGCACTGGACCATCGAGGCGGCCCGGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340738.9
ENST00000555123.5
CDS GCA 72 bp ACACACCTGTCAGAGGAGATGGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCCGGGGCAGTGTCGTCT +
Preference number: 6 (lower is better)
Translates to: THLSEEMGWPSF*QAAWDSGAVSS
Trigger: AGACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216658.9
CDS GCA 72 bp GGGGACGACGGGGCCCATGGAGAGATCCCTGGCAGCTaGTCATGCACTCTTGCTCCGAGGCAAAGTTATTGG +
Preference number: 6 (lower is better)
Translates to: GDDGAHGEIPGS*SCTLAPRQSYW
Trigger: CCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGGGCCCCGTCGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS GCA 72 bp GTGAACCTGTCAGAGGAGATGGGCTGGCCATCTTTCTaGCAGGCAGCCTGGGATTCCGGGGCAGTGTCGTCT +
Preference number: 6 (lower is better)
Translates to: VNLSEEMGWPSF*QAAWDSGAVSS
Trigger: AGACGACACTGCCCCGGAATCCCAGGCTGCCTGGCAGAAAGATGGCCAGCCCATCTCCTCTGACAGGTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555123.5
CDS CCA 72 bp TTGGAGCATAGACCCCAGGTGCCAACATGCCAGGCCTaGTCACTGAGGAGGGGGCAGTCCTCATGCACACAG +
Preference number: 6 (lower is better)
Translates to: LEHRPQVPTCQA*SLRRGQSSCTQ
Trigger: CTGTGTGCATGAGGACTGCCCCCTCCTCAGTGACCAGGCCTGGCATGTTGGCACCTGGGGTCTATGCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp TTGCCATGGCAGCCGCCATACCAGAAGCGGTTACATTaGCCCACAGAGGCAACGAAGTACCAGCGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: LPWQPPYQKRLH*PTEATKYQRAA
Trigger: GGCTGCCCGCTGGTACTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGGTATGGCGGCTGCCATGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS CCA 72 bp ATGTCTACACCCCTGTCTGGGGGCCTGACCTGGCCCTaGGATCCAGGATGCTTCCACCAGAGTCTGTCCACT +
Preference number: 6 (lower is better)
Translates to: MSTPLSGGLTWP*DPGCFHQSLST
Trigger: AGTGGACAGACTCTGGTGGAAGCATCCTGGATCCCAGGGCCAGGTCAGGCCCCCAGACAGGGGTGTAGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS TCA 72 bp AGACACTTGTCCTCCTGCTTGGACGAGTCCAGCTCGTaGTCACAGCCGACAACCCGGCAGCTGCCATCCACA +
Preference number: 6 (lower is better)
Translates to: RHLSSCLDESSS*SQPTTRQLPST
Trigger: TGTGGATGGCAGCTGCCGGGTTGTCGGCTGTGATCACGAGCTGGACTCGTCCAAGCAGGAGGACAAGTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555035.1
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp AGAGGTGGCCGGTCTTCCAAGGAGCACGCTGCGGTATaGAGCAAAGAACCCCTTTCACCCCGGCAAGTAACG +
Preference number: 6 (lower is better)
Translates to: RGGRSSKEHAAV*SKEPLSPRQVT
Trigger: CGTTACTTGCCGGGGTGAAAGGGGTTCTTTGCTCCATACCGCAGCGTGCTCCTTGGAAGACCGGCCACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp GAGAGGTCGGGAGGGACGGCACACACCAGGTTCATGTaGGGGCTAAACTACACGCTCGACCCATGTGGAACA +
Preference number: 6 (lower is better)
Translates to: ERSGGTAHTRFM*GLNYTLDPCGT
Trigger: TGTTCCACATGGGTCGAGCGTGTAGTTTAGCCCCCACATGAACCTGGTGTGTGCCGTCCCTCCCGACCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS CAA 72 bp ATTGCCATGGCAGCCGCCATACCAGAAGCGGTTACATaGGCCCACAGAGGCAACGAAGTACCAGCGGGCAGC +
Preference number: 6 (lower is better)
Translates to: IAMAAAIPEAVT*AHRGNEVPAGS
Trigger: GCTGCCCGCTGGTACTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGGTATGGCGGCTGCCATGGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS CAA 90 bp GTTATTGGCATTGCCATGGCAGCCGCCATACCAGAAGCGGTTACATaGGCCCACAGAGGCAACGAAGTACCAGCGGGCAGCCCAGTCTGC +
Preference number: 6 (lower is better)
Translates to: VIGIAMAAAIPEAVT*AHRGNEVPAGSPVC
Trigger: GCAGACTGGGCTGCCCGCTGGTACTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS CAA 90 bp ACGACGGGGCCCATGGAGAGATCCCTGGCAGCTGCTCATGCACTCTaGCTCCGAGGCAAAGTTATTGGCATTGCCATGGCAGCCGCCATA +
Preference number: 6 (lower is better)
Translates to: TTGPMERSLAAAHAL*LRGKVIGIAMAAAI
Trigger: TATGGCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGGGCCCCGTCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS CAA 90 bp GTTATTGGCATTGCCATGGCAGCCGCCATACCAGAAGCGGTTACATaGGCCCACAGAGGCAACGAAGTACCAGCGGGCAGCCCAGTCATG +
Preference number: 6 (lower is better)
Translates to: VIGIAMAAAIPEAVT*AHRGNEVPAGSPVM
Trigger: CATGACTGGGCTGCCCGCTGGTACTTCGTTGCCTCTGTGGGCCAATGTAACCGCTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555445.5
CDS TCA 72 bp CAAGTCTCTGAAGCCCCAGCTTCTCCATCTGTAGAATaGTGGCAACAAGGCCCACCAGGCAGGGCTCTCGGG +
Preference number: 6 (lower is better)
Translates to: QVSEAPASPSVE*WQQGPPGRALG
Trigger: CCCGAGAGCCCTGCCTGGTGGGCCTTGTTGCCATCATTCTACAGATGGAGAAGCTGGGGCTTCAGAGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555700.1
CDS GCA 72 bp GACGGGGCCCATGGAGAGATCCCTGGCAGCTGCTCATaGACTCTTGCTCCGAGGCAAAGTTATTGGCATTGC +
Preference number: 6 (lower is better)
Translates to: DGAHGEIPGSCS*TLAPRQSYWHC
Trigger: GCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGGGCCCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS GCA 72 bp CCATGGAGAGATCCCTGGCAGCTGCTCATGCACTCTTaGTCCGAGGCAAAGTTATTGGCATTGCCATGGCAG +
Preference number: 6 (lower is better)
Translates to: PWRDPWQLLMHS*SEAKLLALPWQ
Trigger: CTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS CCA 72 bp CACTCTTGCTCCGAGGCAAAGTTATTGGCATTGCCATaGCAGCCGCCATACCAGAAGCGGTTACATTGGCCC +
Preference number: 6 (lower is better)
Translates to: HSCSEAKLLALP*QPPYQKRLHWP
Trigger: GGGCCAATGTAACCGCTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS CCA 72 bp AGCTGCTCATGCACTCTTGCTCCGAGGCAAAGTTATTaGCATTGCCATGGCAGCCGCCATACCAGAAGCGGT +
Preference number: 6 (lower is better)
Translates to: SCSCTLAPRQSY*HCHGSRHTRSG
Trigger: ACCGCTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS CCA 72 bp AGGAGAGAGGACACTGGGAGAGCCATCAAGGGCCTCTaGAGGTCTGGGAGACAGAGGGAAGAGGTAATCAAA +
Preference number: 6 (lower is better)
Translates to: RREDTGRAIKGL*RSGRQREEVIK
Trigger: TTTGATTACCTCTTCCCTCTGTCTCCCAGACCTCCAGAGGCCCTTGATGGCTCTCCCAGTGTCCTCTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554527.1
CDS CAA 72 bp CCCATGGAGAGATCCCTGGCAGCTGCTCATGCACTCTaGCTCCGAGGCAAAGTTATTGGCATTGCCATGGCA +
Preference number: 6 (lower is better)
Translates to: PMERSLAAAHAL*LRGKVIGIAMA
Trigger: TGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGAGCAGCTGCCAGGGATCTCTCCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS TCA 72 bp TCAAAGGCCATTCCAGAGCCAACCGTTCCCACCCCTTaGGAGCAAACAGGTGGAGGACAGGGAGAAATCAAG +
Preference number: 6 (lower is better)
Translates to: SKAIPEPTVPTP*EQTGGGQGEIK
Trigger: CTTGATTTCTCCCTGTCCTCCACCTGTTTGCTCTCAAGGGGTGGGAACGGTTGGCTCTGGAATGGCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554527.1
CDS CCA 72 bp CAGCCTCCCTGTGCTTGTAGTAGAAGTTCTCCCCCTTaGGAATGCAGTTCAGTTCACACTTGTTTGGGGCGC +
Preference number: 6 (lower is better)
Translates to: QPPCACSRSSPP*ECSSVHTCLGR
Trigger: GCGCCCCAAACAAGTGTGAACTGAACTGCATTCCCAAGGGGGAGAACTTCTACTACAAGCACAGGGAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216658.9
ENST00000340738.9
ENST00000554301.5
ENST00000555123.5
ENST00000555445.5
ENST00000644200.2
CDS CCA 72 bp CAGCCTCCCTGTGCTTGTAGTAGAAGTTCTCCCCCTTaGGAATGCAGTTCAGTTCACACTTGTTTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: QPPCACSRSSPP*ECSSVHTCLGL
Trigger: CAGCCCCAAACAAGTGTGAACTGAACTGCATTCCCAAGGGGGAGAACTTCTACTACAAGCACAGGGAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555035.1
CDS GCA 72 bp TCATGCACTCTTGCTCCGAGGCAAAGTTATTGGCATTaGCATGGCAGCCGCCATACCAGAAGCGGTTACATT +
Preference number: 6 (lower is better)
Translates to: SCTLAPRQSYWH*HGSRHTRSGYI
Trigger: AATGTAACCGCTTCTGGTATGGCGGCTGCCATGGCAATGCCAATAACTTTGCCTCGGAGCAAGAGTGCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340738.9
ENST00000554301.5
ENST00000554314.1
ENST00000555123.5
ENST00000555445.5
ENST00000555700.1
ENST00000557061.5
ENST00000644200.2
CDS TCA 72 bp TCCTTCATTAATATGATCCAGTCCCAGGAGTCATCTTaGCCAGAACCCACACCTGTGAGGTATACAGGGCAG +
Preference number: 6 (lower is better)
Translates to: SFINMIQSQESS*PEPTPVRYTGQ
Trigger: CTGCCCTGTATACCTCACAGGTGTGGGTTCTGGTCAAGATGACTCCTGGGACTGGATCATATTAATGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555700.1