RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PALM2AKAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000157654

Ensembl transcript IDs: ENST00000259318.7, ENST00000302798.7, ENST00000314527.9, ENST00000374525.5, ENST00000374530.7, ENST00000374531.6, ENST00000413420.5, ENST00000434623.6, ENST00000465091.1, ENST00000471798.1, ENST00000480388.1, ENST00000482335.1, ENST00000483909.5, ENST00000485762.1, ENST00000495980.1, ENST00000497711.1, ENST00000674068.1

Found 1650 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGCCATCCTAACTGCCACTGTGCCTGGGGCTGTGCAATGCTGCTaGCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCC +
Preference number: 1 (lower is better)
Translates to: PAILTATVPGAVQCC*LLCSYPCVCFGNAP
Trigger: GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTGCACAGCCCCAGGCACAGTGGCAGTTAGGATGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR GCA 90 bp GGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGCCCTACTaGTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAGAG +
Preference number: 1 (lower is better)
Translates to: GKYPVPCRLHQPGPY*SLSGPTTIVLHRPE
Trigger: CTCTGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR GCA 90 bp TCTCCAGCCATCCTAACTGCCACTGTGCCTGGGGCTGTGCAATGCTaGTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCC +
Preference number: 1 (lower is better)
Translates to: SPAILTATVPGAVQC*CLLCSYPCVCFGNA
Trigger: GGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTGCACAGCCCCAGGCACAGTGGCAGTTAGGATGGCTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR CCA 90 bp TGTGCAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTaGGAACGCCCCCTTATCGCTGGGTTCTCAGCCCAGGCATCTGGG +
Preference number: 1 (lower is better)
Translates to: CAMLLPPLFLSLCLL*ERPLIAGFSAQASG
Trigger: CCCAGATGCCTGGGCTGAGAACCCAGCGATAAGGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR GCA 90 bp TACTCTCCAGCCATCCTAACTGCCACTGTGCCTGGGGCTGTGCAATaGTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAAC +
Preference number: 1 (lower is better)
Translates to: YSPAILTATVPGAVQ*CCLLCSYPCVCFGN
Trigger: GTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTGCACAGCCCCAGGCACAGTGGCAGTTAGGATGGCTGGAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR GCA 90 bp TTCCTCCTGGTTGGCATAGATCCCTGCTTCCCAGCGCAAAGCCAGTaGGCTCTTTCTTCGATTAACCCGTGTGGCCTCGAGGACACTACT +
Preference number: 1 (lower is better)
Translates to: FLLVGIDPCFPAQSQ*ALSSINPCGLEDTT
Trigger: AGTAGTGTCCTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTGGGAAGCAGGGATCTATGCCAACCAGGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
3UTR CCA 90 bp TCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCTTATCGCTaGGTTCTCAGCCCAGGCATCTGGGACCTCTGGCTAGAAATCCTC +
Preference number: 1 (lower is better)
Translates to: SVLIPVSALGTPPYR*VLSPGIWDLWLEIL
Trigger: GAGGATTTCTAGCCAGAGGTCCCAGATGCCTGGGCTGAGAACCCAGCGATAAGGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR GCA 90 bp CCCACTTTAGCCCCTTTGGGCCACACCTGCAAGGTTCTGCCTCAATaGTCCTGTAATGAAATTCACAGCTCTGAAGAAGGCTGGGTAGGA +
Preference number: 1 (lower is better)
Translates to: PTLAPLGHTCKVLPQ*SCNEIHSSEEGWVG
Trigger: TCCTACCCAGCCTTCTTCAGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCCCAAAGGGGCTAAAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR GCA 90 bp GGAAGTTTATTCGTTGTCTTCTTCCTCCTGGTTGGCATAGATCCCTaGTTCCCAGCGCAAAGCCAGTGCGCTCTTTCTTCGATTAACCCG +
Preference number: 1 (lower is better)
Translates to: GSLFVVFFLLVGIDP*FPAQSQCALSSINP
Trigger: CGGGTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTGGGAAGCAGGGATCTATGCCAACCAGGAGGAAGAAGACAACGAATAAACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
3UTR TCA 90 bp GGAGACGACTACAAGAGGTCATGCGCTCCATGTGGCCTGTCTCCCTaGAAGGCAGGGTGTAAAATTTTGCAGGCTTATATGAGAACACAG +
Preference number: 1 (lower is better)
Translates to: GDDYKRSCAPCGLSP*KAGCKILQAYMRTQ
Trigger: CTGTGTTCTCATATAAGCCTGCAAAATTTTACACCCTGCCTTTCAGGGAGACAGGCCACATGGAGCGCATGACCTCTTGTAGTCGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR GCA 90 bp TGCCAACTGTGCTTAAAAATATGCTCCCAGATCCAGTTGGGGGTCTaGAAGTTTCCTTCTCTCACAGTGGGAAGGACTGTGAGGAGACGA +
Preference number: 1 (lower is better)
Translates to: CQLCLKICSQIQLGV*KFPSLTVGRTVRRR
Trigger: TCGTCTCCTCACAGTCCTTCCCACTGTGAGAGAAGGAAACTTGCAGACCCCCAACTGGATCTGGGAGCATATTTTTAAGCACAGTTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 90 bp CTTCCAGTTCACAGTATTGCAGTTAGTGGTACAGTGAGGTCTACGTaGGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAG +
Preference number: 1 (lower is better)
Translates to: LPVHSIAVSGTVRST*VVESTGCPEERRRK
Trigger: CTTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTACCACTAACTGCAATACTGTGAACTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
3UTR TCA 90 bp GATGATGCTTGGGAAGAGAGTCTCACAAGAGTGGTGAGTAGTTTCTaGGACATGACAACTCTGTTAGCCAGACAGAGGAGCAGGTGTAGG +
Preference number: 1 (lower is better)
Translates to: DDAWEESLTRVVSSF*DMTTLLARQRSRCR
Trigger: CCTACACCTGCTCCTCTGTCTGGCTAACAGAGTTGTCATGTCTCAGAAACTACTCACCACTCTTGTGAGACTCTCTTCCCAAGCATCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR GCA 90 bp CTGAAGCCAGCAAACAGCTCTGGAGGAATTACCTGTACACCCAAGTaGCACGGTCACTCTGGAATTTTAATACACACACACACACACCCT +
Preference number: 1 (lower is better)
Translates to: LKPANSSGGITCTPK*HGHSGILIHTHTHP
Trigger: AGGGTGTGTGTGTGTGTGTATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGTTTGCTGGCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR TCA 90 bp CACGGCCTCCTGCCACTGACAGACCCTGTTTCCATAATTTCTGGATaGGAAAGCCAAGTCATGTCAGTAGTTAATCAGCTCTGGAGGAAA +
Preference number: 1 (lower is better)
Translates to: HGLLPLTDPVSIISG*ESQVMSVVNQLWRK
Trigger: TTTCCTCCAGAGCTGATTAACTACTGACATGACTTGGCTTTCTCATCCAGAAATTATGGAAACAGGGTCTGTCAGTGGCAGGAGGCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR GCA 90 bp CACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCCTaGAGCAACTATGTTGATTTGCTTGTAACATGTTTTGTCCTTTTG +
Preference number: 1 (lower is better)
Translates to: HHCPSSPREAGLSSA*SNYVDLLVTCFVLL
Trigger: CAAAAGGACAAAACATGTTACAAGCAAATCAACATAGTTGCTGCAGGCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR CCA 90 bp GGCTCTCCATTAGCACCTTCAGGCAATTGCATAGTTCTTTCATTTTaGAGTTGTCTCCATGACAGCAGTGTTCACAGCTGGGCTGGAGTT +
Preference number: 1 (lower is better)
Translates to: GSPLAPSGNCIVLSF*SCLHDSSVHSWAGV
Trigger: AACTCCAGCCCAGCTGTGAACACTGCTGTCATGGAGACAACTCCAAAATGAAAGAACTATGCAATTGCCTGAAGGTGCTAATGGAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR CCA 90 bp AGAACTCTTCCCACCTGCCAGAATAGGATATCACAGAATTGGAGTTaGAGCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGC +
Preference number: 1 (lower is better)
Translates to: RTLPTCQNRISQNWS*SYIQNSLDQALPGG
Trigger: GCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGCTCCAACTCCAATTCTGTGATATCCTATTCTGGCAGGTGGGAAGAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 90 bp ATCGCCCAGAGAGGCTGGTCTCAGTTCCGCCTGCAGCAACTATGTTaGTTTGCTTGTAACATGTTTTGTCCTTTTGGATCCATTGTAGAT +
Preference number: 1 (lower is better)
Translates to: IAQRGWSQFRLQQLC*FACNMFCPFGSIVD
Trigger: ATCTACAATGGATCCAAAAGGACAAAACATGTTACAAGCAAATCAACATAGTTGCTGCAGGCGGAACTGAGACCAGCCTCTCTGGGCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR CCA 90 bp CTAATGGCAGGTATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTaGAAACACTGGATCTCATGTAATGGCAGTGCAAGGCCAAGTGAC +
Preference number: 1 (lower is better)
Translates to: LMAGIESSIFQPRPI*KHWISCNGSARPSD
Trigger: GTCACTTGGCCTTGCACTGCCATTACATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATACCTGCCATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 90 bp TACAAAATGAAACCCCCAGTGCCAATGGGTTCAATTCCAGTCAAGTaGGTTAAGGCTACCATATCACTGGCTGATACGAAGAGTCCATTC +
Preference number: 1 (lower is better)
Translates to: YKMKPPVPMGSIPVK*VKATISLADTKSPF
Trigger: GAATGGACTCTTCGTATCAGCCAGTGATATGGTAGCCTTAACTCACTTGACTGGAATTGAACCCATTGGCACTGGGGGTTTCATTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR CCA 90 bp GGGGCCAGAAAGAAAAGAGTATGGATGCAAGGCTTTGTAATCAACTaGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGAT +
Preference number: 1 (lower is better)
Translates to: GARKKRVWMQGFVIN*GGDEQLMHYSTIHD
Trigger: ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCTTTTCTTTCTGGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR TCA 90 bp ACGAAGAGTCCATTCCAATCGAGCAGGAAGGAAGTGATTCACTCTTaGAGACACAAGGAAAGGTTTAGAGGAAAAGCAAGTTCTTGGAGA +
Preference number: 1 (lower is better)
Translates to: TKSPFQSSRKEVIHS*RHKERFRGKASSWR
Trigger: TCTCCAAGAACTTGCTTTTCCTCTAAACCTTTCCTTGTGTCTTCAAGAGTGAATCACTTCCTTCCTGCTCGATTGGAATGGACTCTTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR TCA 90 bp TTTCTGGAACCCCTGTATGATTTTGACTCTCCTAAGTCAGGAGCTTaGGAGCAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACT +
Preference number: 1 (lower is better)
Translates to: FLEPLYDFDSPKSGA*EQERMFQNPAKNRT
Trigger: AGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTGCTCTCAAGCTCCTGACTTAGGAGAGTCAAAATCATACAGGGGTTCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR GCA 90 bp AGAATTGGAGTTGGAGCTACATACAGAATAGTTTGGATCAGGCATTaGCTGGTGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACT +
Preference number: 1 (lower is better)
Translates to: RIGVGATYRIVWIRH*LVASVYIKTCHCKT
Trigger: AGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGCTCCAACTCCAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR GCA 90 bp CAAGAACCCCCAGCTCTAGAACTCTGTTATTCTTTAAGCAATAAGTaGTCTGGTTCAATCAACTGTGGTCAAAGACCACTTCATCTGCCT +
Preference number: 1 (lower is better)
Translates to: QEPPALELCYSLSNK*SGSINCGQRPLHLP
Trigger: AGGCAGATGAAGTGGTCTTTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTCTAGAGCTGGGGGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR GCA 90 bp ATTCAAAATATTCAGGAGACTCAACCATATAAAGATGGTGCCAATTaGCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGCTTCAA +
Preference number: 1 (lower is better)
Translates to: IQNIQETQPYKDGAN*PCAIWAAICRMWLQ
Trigger: TTGAAGCCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAATATTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR CCA 90 bp AAGAATAGAACTCTTCCCACCTGCCAGAATAGGATATCACAGAATTaGAGTTGGAGCTACATACAGAATAGTTTGGATCAGGCATTGCCT +
Preference number: 1 (lower is better)
Translates to: KNRTLPTCQNRISQN*SWSYIQNSLDQALP
Trigger: AGGCAATGCCTGATCCAAACTATTCTGTATGTAGCTCCAACTCCAATTCTGTGATATCCTATTCTGGCAGGTGGGAAGAGTTCTATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATaGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAG +
Preference number: 1 (lower is better)
Translates to: KCRRSGIITASSGQI*RETPFILWLLEKME
Trigger: CTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR TCA 90 bp AAAGGCAGCATGTTCATAATCACAGCTCCATGTACACTATCATCATaGAGGGTAGTTACTTGCTGCTATAGGTGGGATTATAGGTCTCAT +
Preference number: 1 (lower is better)
Translates to: KGSMFIITAPCTLSS*RVVTCCYRWDYRSH
Trigger: ATGAGACCTATAATCCCACCTATAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATGAACATGCTGCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR TCA 90 bp CCAACCACAAATGAAAGTATTTACAGAGACATCACTCACCCCGAGTaGGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTCACTG +
Preference number: 1 (lower is better)
Translates to: PTTNESIYRDITHPE*DAKAENFTNNLHSL
Trigger: CAGTGAATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTCTGTAAATACTTTCATTTGTGGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 90 bp GTGGTTTATCTGCTTATGTGTAGACTGAAGATGGTCAGAGGGCTCTaGCTCACCGTTTCATATATATTTCTCAAATGCACCATAGTAAGT +
Preference number: 1 (lower is better)
Translates to: VVYLLMCRLKMVRGL*LTVSYIFLKCTIVS
Trigger: ACTTACTATGGTGCATTTGAGAAATATATATGAAACGGTGAGTCAGAGCCCTCTGACCATCTTCAGTCTACACATAAGCAGATAAACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 90 bp GGTCACTCTGGAATTTTAATACACACACACACACACCCTTACTCATaGACATACACATTTTACAAACACACAATGGTGTACACACACACA +
Preference number: 1 (lower is better)
Translates to: GHSGILIHTHTHPYS*TYTFYKHTMVYTHT
Trigger: TGTGTGTGTGTACACCATTGTGTGTTTGTAAAATGTGTATGTTCATGAGTAAGGGTGTGTGTGTGTGTGTATTAAAATTCCAGAGTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR TCA 90 bp AGGAATTTAAGCGATTTGCATGGGAACCAGAGGGGTTATTTCTCTTaGAAATGGAGTAGATATAACCTTGTCTTGTTAGAAAAAGGGTCT +
Preference number: 1 (lower is better)
Translates to: RNLSDLHGNQRGYFS*KWSRYNLVLLEKGS
Trigger: AGACCCTTTTTCTAACAAGACAAGGTTATATCTACTCCATTTTCAAGAGAAATAACCCCTCTGGTTCCCATGCAAATCGCTTAAATTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 90 bp TCGTGTATTTATGAAGTTTCTGAAACACCTATGTCTTACTTATGCTaGGAATCTGTGGTTTCAATAGCAAATGTGCATGTGGCAAAAATG +
Preference number: 1 (lower is better)
Translates to: SCIYEVSETPMSYLC*ESVVSIANVHVAKM
Trigger: CATTTTTGCCACATGCACATTTGCTATTGAAACCACAGATTCTCAGCATAAGTAAGACATAGGTGTTTCAGAAACTTCATAAATACACGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR CCA 90 bp ATATGCAAATATATGCGCCATATTCAAACACACCTTCATTTAGTGTaGCTACAAATAGCTCGAATAAAGGTAACACATCTTACTTCAGTC +
Preference number: 1 (lower is better)
Translates to: ICKYMRHIQTHLHLV*LQIARIKVTHLTSV
Trigger: GACTGAAGTAAGATGTGTTACCTTTATTCGAGCTATTTGTAGCCACACTAAATGAAGGTGTGTTTGAATATGGCGCATATATTTGCATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR GCA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCCAGCCTGGGCCCTACTaGTCTCTAAGTGGCCCTACC +
Preference number: 2 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPQPGPY*SLSGPT
Trigger: GGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTG...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CCA 90 bp CGCAAAGCCAGTGCGCTCTTTCTTCGATTAACCCGTGTGGCCTCGAGGACACTAAGCTGGGGCCTTCAGTaGTGGGGGATGGAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RKASALFLRLTRVASRTLSWGLQ*WGMEEV
Trigger: AACCTCCTCCATCCCCCACCACTGAAGGCCCCAGCT...TAGTGTCCTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGCTTTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495980.1
3UTR CAA 90 bp TCCTCCAGGGGACGGTCCCATCTTCAGAAAGTTAAAAGGGTCCATTaGGGATCCCAGAGCCTAGCACGGTGCTATGTACAAAGCGGTGGC +
Preference number: 2 (lower is better)
Translates to: SSRGRSHLQKVKRVH*GSQSLARCYVQSGG
Trigger: GCCACCGCTTTGTACATAGCACCGTGCTAGGCTCTGGGATCCCAAATGGACCCTTTTAACTTTCTGAAGATGGGACCGTCCCCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR TCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCAAGTCCTTTCTCTTTTaGTTCCTGGGTGTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRKSFLF*FLGVQS
Trigger: ACTCTGGACACCCAGGAATCAAAAGAGAAAGGACTT...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR TCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCACTCCCGACCTCAGGTaGACCACCCGCCGCGGACTT +
Preference number: 2 (lower is better)
Translates to: ATYRIVWIRHCLVASVYITPDLR*TTRRGL
Trigger: AAGTCCGCGGCGGGTGGTTCACCTGAGGTCGGGAGT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGCAGCCTGGGCCCTACTaGTCTCTAAGTGGCCCTACC +
Preference number: 2 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQQPGPY*SLSGPT
Trigger: GGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTG...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGGGATCCATTGTAGATTaGCCCCAAACCAGACACTGG +
Preference number: 2 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGGSIVD*PQTRHW
Trigger: CCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCC...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR GCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTCTGTGCCATGTAGGCTaGACCAGCCTGGGCCCTACT +
Preference number: 2 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSLCHVG*TSLGPT
Trigger: AGTAGGGCCCAGGCTGGTGCAGCCTACATGGCACAG...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR GCA 90 bp TTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTTATTCGTTGGGGGCTAAGTCAGGCTaGAAGCTGGGGCCTTCAGTG +
Preference number: 2 (lower is better)
Translates to: LVSQAPKTLPGLKEVYSLGAKSG*KLGPSV
Trigger: CACTGAAGGCCCCAGCTTGCAGCCTGACTTAGCCCC...CAACGAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495980.1
3UTR-3UTR GCA 90 bp AGCCAGTGCGCTCTTTCTTCGATTAACCCGTGTGGCCTCGAGGACACTACTATCTCTTCCATGAGGGTCTaGATCAGATTCTTGGGCCGC +
Preference number: 2 (lower is better)
Translates to: SQCALSSINPCGLEDTTISSMRV*IRFLGR
Trigger: GCGGCCCAAGAATCTGATGCAGACCCTCATGGAAGA...GATAGTAGTGTCCTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
3UTR-3UTR CCA 90 bp TTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTTATTCGTTGAGATTCTTGGGCCGCTaGGTTCCGGCAGCCTCTTCA +
Preference number: 2 (lower is better)
Translates to: LVSQAPKTLPGLKEVYSLRFLGR*VPAASS
Trigger: TGAAGAGGCTGCCGGAACCCAGCGGCCCAAGAATCT...CAACGAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
3UTR-3UTR TCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACAGTTAGTGGTACAGTaGGGTCTACGTGAGTGGTGG +
Preference number: 2 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRQLVVQ*GLREWW
Trigger: CCACCACTCACGTAGACCTCACTGTACCACTAACTG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGCAGTGGGTCCAGGGATaGGCAGAGATGACTGAGCTT +
Preference number: 2 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQQWVQG*AEMTEL
Trigger: AAGCTCAGTCATCTCTGCTCATCCCTGGACCCACTG...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTATGCCCCCACCATCTTaGACCAAGTTGTTCAACGCG +
Preference number: 2 (lower is better)
Translates to: TALEELPVHPSATVTLEFMPPPS*TKLFNA
Trigger: CGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCAT...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR GCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGTTGCCCAGGCTGGAGTaGACATCTCGGCTCATTGCA +
Preference number: 2 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQLPRLE*TSRLIA
Trigger: TGCAATGAGCCGAGATGTGCACTCCAGCCTGGGCAA...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATACAGCCTGGGCCCTACTaGTCTCTAAGTGGCCCTACC +
Preference number: 2 (lower is better)
Translates to: SGGITCTPKCHGHSGILIQPGPY*SLSGPT
Trigger: GGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTG...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR GCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGCAGGTGGGAAACTGGTaGAGGGAAATATCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: KDGANCPCAIWAAICRMWQVGNW*REISCA
Trigger: GGCACAGGATATTTCCCTGCACCAGTTTCCCACCTG...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR GCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTCAGGTGGGAAACTGGTaGAGGGAAATATCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: TALEELPVHPSATVTLEFQVGNW*REISCA
Trigger: GGCACAGGATATTTCCCTGCACCAGTTTCCCACCTG...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAAATTTCTTGGTTTCTTaGTCTCCCAAGCACCAAAGA +
Preference number: 2 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPNFLVS*SPKHQR
Trigger: TCTTTGGTGCTTGGGAGACCAAGAAACCAAGAAATT...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGCTTTGTTGCCCAGGCTaGAGTGCACATCTCGGCTCA +
Preference number: 2 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQLCCPG*SAHLGS
Trigger: TGAGCCGAGATGTGCACTCCAGCCTGGGCAACAAAG...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCGTGCCACGGTCACTCTaGAATTTTAATACACACACA +
Preference number: 2 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPVPRSL*NFNTHT
Trigger: TGTGTGTGTATTAAAATTCCAGAGTGACCGTGGCAC...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR TCA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTGGCTGTCCAGATCTTTaGTGCAGAAAGTCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSGCPDL*CRKSAV
Trigger: GACTGCAGACTTTCTGCATCAAAGATCTGGACAGCC...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTCAGGTGGGAAACTGGTaGAGGGAAATATCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSQVGNW*REISCA
Trigger: GGCACAGGATATTTCCCTGCACCAGTTTCCCACCTG...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR GCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTGCTGTGCAATGCTGCTaGCTCCTCTGTTCTTATCCC +
Preference number: 2 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSAVQCC*LLCSYP
Trigger: GGGATAAGAACAGAGGAGGCAGCAGCATTGCACAGC...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGAATTTCTTGGTTTCTTaGTCTCCCAAGCACCAAAGA +
Preference number: 2 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGNFLVS*SPKHQR
Trigger: TCTTTGGTGCTTGGGAGACCAAGAAACCAAGAAATT...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGGGATCCATTGTAGATTaGCCCCAAACCAGACACTGG +
Preference number: 2 (lower is better)
Translates to: KDGANCPCAIWAAICRMWGSIVD*PQTRHW
Trigger: CCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCC...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTCTACTGCTCTCTAAGTaGCCCTACCACCATTGTCCT +
Preference number: 2 (lower is better)
Translates to: TALEELPVHPSATVTLEFLLLSK*PYHHCP
Trigger: AGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAG...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CCA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGACGCCCCCTTATCGCTaGGTTCTCAGCCCAGGCATC +
Preference number: 2 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRTPPYR*VLSPGI
Trigger: GATGCCTGGGCTGAGAACCCAGCGATAAGGGGGCGT...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR TCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACCTACATTTCAGCTGTaGCAAGCTCTGGGTTCTTCT +
Preference number: 2 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRPTFQL*QALGSS
Trigger: AGAAGAACCCAGAGCTTGTCACAGCTGAAATGTAGG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCTGCAGCAACTATGTTaGTTTGCTTGTAACATGTTT +
Preference number: 2 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHLQQLC*FACNMF
Trigger: AAACATGTTACAAGCAAATCAACATAGTTGCTGCAG...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR TCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGTTCTCACTCCACTCCTaGAGCCAGCAAACAGCTCTG +
Preference number: 2 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLFSLHS*SQQTAL
Trigger: CAGAGCTGTTTGCTGGCTTCAGGAGTGGAGTGAGAA...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAATCGCCCAGAGAGGCTaGTCTCAGTTCCGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: KCRRSGIITASSGQIWREIAQRG*SQFRLQ
Trigger: CTGCAGGCGGAACTGAGACCAGCCTCTCTGGGCGAT...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTAAGTCCTTTCTCTTTTaGTTCCTGGGTGTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSKSFLF*FLGVQS
Trigger: ACTCTGGACACCCAGGAATCAAAAGAGAAAGGACTT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR TCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACAGAACACACTACAAAATaGAACCCCCAGTGCCAATGG +
Preference number: 2 (lower is better)
Translates to: TIERETTADGQVMESVPTEHTTK*NPQCQW
Trigger: CCATTGGCACTGGGGGTTTCATTTTGTAGTGTGTTC...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTCAGTGCAAGGCCAAGTaGCAGGCCCTTTGTTCATGC +
Preference number: 2 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSQCKAK*QALCSC
Trigger: GCATGAACAAAGGGCCTGTCACTTGGCCTTGCACTG...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTCTGTCTATGTCCATCTaGGTTTTATATTGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSLSMSI*VLYWQG
Trigger: GCCCTGCCAATATAAAACGCAGATGGACATAGACAG...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCAGGGAAATATCCTGTaGCATGTAGGCTGCACCAGC +
Preference number: 2 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSQGNIL*HVGCTS
Trigger: GCTGGTGCAGCCTACATGGCACAGGATATTTCCCTG...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATACAGGGAAATATCCTGTaGCATGTAGGCTGCACCAGC +
Preference number: 2 (lower is better)
Translates to: SGGITCTPKCHGHSGILIQGNIL*HVGCTS
Trigger: GCTGGTGCAGCCTACATGGCACAGGATATTTCCCTG...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTCATGCCCCCAAGGCTTaGCCTAGTGCTATAGGACTC +
Preference number: 2 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSHAPKA*PSAIGL
Trigger: GAGTCCTATAGCACTAGGCCAAGCCTTGGGGGCATG...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCGGATCAGGCATTGCCTaGTGGCCTCTGTGTATATCA +
Preference number: 2 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTGSGIA*WPLCIS
Trigger: TGATATACACAGAGGCCACCAGGCAATGCCTGATCC...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGCTGCAAGTGACAGGTaGGAAACTGGTGCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: SGGITCTPKCHGHSGILIAASDR*ETGAGK
Trigger: TTTCCCTGCACCAGTTTCCCACCTGTCACTTGCAGC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR TCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTAAGTCCTTTCTCTTTTaGTTCCTGGGTGTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSKSFLF*FLGVQS
Trigger: ACTCTGGACACCCAGGAATCAAAAGAGAAAGGACTT...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR TCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAACAGTGAGGTCTACGTaGGTGGTGGAGAGTACAGGC +
Preference number: 2 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLTVRST*VVESTG
Trigger: GCCTGTACTCTCCACCACTCACGTAGACCTCACTGT...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGAGTTCTTGGAGAGAATaGAGCACACACATGCACGTT +
Preference number: 2 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQSSWRE*STHMHV
Trigger: AACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACT...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCCGAGCAGGAAGGAAGTaGTTCACTCTTGAAGACACA +
Preference number: 2 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTRAGRK*FTLEDT
Trigger: TGTGTCTTCAAGAGTGAATCACTTCCTTCCTGCTCG...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCATCCAGTTGGGGGTCTaGAAGTTTCCTTCTCTCACA +
Preference number: 2 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIIQLGV*KFPSLT
Trigger: TGTGAGAGAAGGAAACTTGCAGACCCCCAACTGGAT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCAACCCCCAGTGCCAATaGGTTCAATTCCAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: ATYRIVWIRHCLVASVYINPQCQ*VQFQSS
Trigger: ACTTGACTGGAATTGAACCCATTGGCACTGGGGGTT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAAATCGCCCAGAGAGGCTaGTCTCAGTTCCGCCTGCAG +
Preference number: 2 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQIAQRG*SQFRLQ
Trigger: CTGCAGGCGGAACTGAGACCAGCCTCTCTGGGCGAT...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATACTACTGCTCTCTAAGTaGCCCTACCACCATTGTCCT +
Preference number: 2 (lower is better)
Translates to: SGGITCTPKCHGHSGILILLLSK*PYHHCP
Trigger: AGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAG...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR CAA 90 bp AATTCTAAGATTGCTCAGAAGGCTCAAGGAAACTGTGTTTTAGGTTaGGCCATAAGGGCATTCCCTACCTTCTCTTCCACCCCATCACCA +
Preference number: 2 (lower is better)
Translates to: NSKIAQKAQGNCVLG*AIRAFPTFSSTPSP
Trigger: TGGTGATGGGGTGGAAGAGAAGGTAGGGAATGCCCTTATGGCCAAACCTAAAACACAGTTTCCTTGAGCCTTCTGAGCAATCTTAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTTCAATTCCAGTCAAGTaGGTTAAGGCTACCATATCA +
Preference number: 2 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSSIPVK*VKATIS
Trigger: TGATATGGTAGCCTTAACTCACTTGACTGGAATTGA...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGAAGAGAGACAACCGCTaGTGGGCAGGTTATGGAATC +
Preference number: 2 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMKRDNR*WAGYGI
Trigger: GATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTT...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTAAACCAAGCCTTGGATaGAATAATCTTCAACAGCAG +
Preference number: 2 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSKPSLG*NNLQQQ
Trigger: CTGCTGTTGAAGATTATTTCATCCAAGGCTTGGTTT...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGTGTACACTATCATCATaGAGGGTAGTTACTTGCTGC +
Preference number: 2 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQCTLSS*RVVTCC
Trigger: GCAGCAAGTAACTACCCTTCATGATGATAGTGTACA...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGTATGAAGAGGCAATATaGGGAGAAGACGACCCTTTA +
Preference number: 2 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQYEEAI*GEDDPL
Trigger: TAAAGGGTCGTCTTCTCCTCATATTGCCTCTTCATA...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTCATTGCAAAACTAAGTaGCTGGATGTCTCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: SLTPSEMLKLKISPTTYIHCKTK*LDVSLP
Trigger: GGGCAGGGAGACATCCAGTCACTTAGTTTTGCAATG...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGTTCGTGTTTCCTTTCTaGTTGATCCAAAAGGAATCC +
Preference number: 2 (lower is better)
Translates to: KDGANCPCAIWAAICRMWFVFPF*LIQKES
Trigger: GGATTCCTTTTGGATCAATCAGAAAGGAAACACGAA...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR GCA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTCCCTCCCTCCTCTTTTaGTACCCATTGGTTCAACTG +
Preference number: 2 (lower is better)
Translates to: SLTPSEMLKLKISPTTYIPSLLF*YPLVQL
Trigger: CAGTTGAACCAATGGGTAGCAAAAGAGGAGGGAGGG...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp GAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTAATGACTACAAGAGGTCATaGGCTCCATGTGGCCTGTCT +
Preference number: 2 (lower is better)
Translates to: ESSIFQPRPIWKHWISCNDYKRS*APCGLS
Trigger: AGACAGGCCACATGGAGCGCATGACCTCTTGTAGTC...ATTACATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTACTGCATCAGCTCGGTaGCTTTATATCCCTTTTCAT +
Preference number: 2 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSTASAR*LYIPFH
Trigger: ATGAAAAGGGATATAAAGGCACCGAGCTGATGCAGT...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCAGGCTACCATATCACTaGCTGATACGAAGAGTCCAT +
Preference number: 2 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIRLPYH*LIRRVH
Trigger: ATGGACTCTTCGTATCAGCCAGTGATATGGTAGCCT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCGAGAAACCAGAGACATaGCAGTGTGTGACTACGTTA +
Preference number: 2 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIEKPET*QCVTTL
Trigger: TAACGTAGTCACACACTGCCATGTCTCTGGTTTCTC...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCAGGGTCTTGATCTCTTaGGTAGTAGAAAAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIRVLIS*VVEKGL
Trigger: GAGGCCTTTTTCTACTACCCAAGAGATCAAGACCCT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGCTGCAAGTGACAGGTaGGAAACTGGTGCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: MERNAIHFMAAGENGVNAAASDR*ETGAGK
Trigger: TTTCCCTGCACCAGTTTCCCACCTGTCACTTGCAGC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR CAA 90 bp AGAAGCTGCATCAGACACAACATTTTCTGGAACCCCTGTATGATTTaGACTCTCCTAAGTCAGGAGCTTGAGAGCAGGAAAGAATGTTCC +
Preference number: 2 (lower is better)
Translates to: RSCIRHNIFWNPCMI*TLLSQELESRKECS
Trigger: GGAACATTCTTTCCTGCTCTCAAGCTCCTGACTTAGGAGAGTCAAAATCATACAGGGGTTCCAGAAAATGTTGTGTCTGATGCAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACATCAATTCCAGTCAAGTaGGTTAAGGCTACCATATCA +
Preference number: 2 (lower is better)
Translates to: TIERETTADGQVMESVPTSIPVK*VKATIS
Trigger: TGATATGGTAGCCTTAACTCACTTGACTGGAATTGA...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGGAACACACTACAAAATaGAACCCCCAGTGCCAATGG +
Preference number: 2 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMEHTTK*NPQCQW
Trigger: CCATTGGCACTGGGGGTTTCATTTTGTAGTGTGTTC...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGAGAGATCAATTGCTACTaGTGCTTCAAACAATGTTTG +
Preference number: 2 (lower is better)
Translates to: APSMMKWEHHGNHCRLDREINCY*CFKQCL
Trigger: CAAACATTGTTTGAAGCATCAGTAGCAATTGATCTC...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTAGAAGAAGGCCTTTGTaGAGTGAACTGGTGGTAGCA +
Preference number: 2 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSRRRPL*SELVVA
Trigger: TGCTACCACCAGTTCACTTCACAAAGGCCTTCTTCT...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGCTGCAGCAACTATGTTaGTTTGCTTGTAACATGTTT +
Preference number: 2 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQLQQLC*FACNMF
Trigger: AAACATGTTACAAGCAAATCAACATAGTTGCTGCAG...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR TCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTTTCGTGTTTCCTTTCTaGTTGATCCAAAAGGAATCC +
Preference number: 2 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSFVFPF*LIQKES
Trigger: GGATTCCTTTTGGATCAATCAGAAAGGAAACACGAA...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR TCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGTTTAGGATTTGTAGCTaGTTCCAAGCCTGCACTTAT +
Preference number: 2 (lower is better)
Translates to: PYKDGANCPCAIWAAICRFRICS*FQACTY
Trigger: ATAAGTGCAGGCTTGGAATCAGCTACAAATCCTAAA...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR GCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGGGCAAGGCAGGTGTTTaGTTCCAGTTCACAGTATTG +
Preference number: 2 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMGKAGV*FQFTVL
Trigger: CAATACTGTGAACTGGAAGCAAACACCTGCCTTGCC...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR GCA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCAGGGTAGTTACTTGCTaGTATAGGTGGGATTATAGG +
Preference number: 2 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTRVVTC*YRWDYR
Trigger: CCTATAATCCCACCTATAGCAGCAAGTAACTACCCT...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTCACATCTCGGCTCATTaGAACCCCTGCCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWAHISAH*NPCLPG
Trigger: ACCTGGGAGGCAGGGGTTGCAATGAGCCGAGATGTG...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGAATCAAGTTCTTTTGTaGGACAGTTCCGACCTTCTT +
Preference number: 2 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQNQVLL*DSSDLL
Trigger: AAGAAGGTCGGAACTGTCGCACAAAAGAACTTGATT...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGAAGGTTCTGCCTCAATaGTCCTGTAATGAAATTCAC +
Preference number: 2 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQKVLPQ*SCNEIH
Trigger: GTGAATTTCATTACAGGAGCATTGAGGCAGAACCTT...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTGGTCTACGTGAGTGGTaGAGAGTACAGGCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPGLREW*RVQAAQ
Trigger: CTGGGCAGCCTGTACTCTCCACCACTCACGTAGACC...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR CCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGAACCCCCAGTGCCAATaGGTTCAATTCCAGTCAAGT +
Preference number: 2 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMNPQCQ*VQFQSS
Trigger: ACTTGACTGGAATTGAACCCATTGGCACTGGGGGTT...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR CCA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTTGTGGCTTTTTGCTTTaGGGGAGTGCTGAGAAGGTA +
Preference number: 2 (lower is better)
Translates to: SLTPSEMLKLKISPTTYICGFLL*GSAEKV
Trigger: TACCTTCTCAGCACTCCCCCAAAGCAAAAAGCCACA...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTGCTGCAAGTGACAGGTaGGAAACTGGTGCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTAASDR*ETGAGK
Trigger: TTTCCCTGCACCAGTTTCCCACCTGTCACTTGCAGC...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGTCTTCTGGGCAAATATaGAGAGAAACGCCATTCATT +
Preference number: 2 (lower is better)
Translates to: PYKDGANCPCAIWAAICRSSGQI*RETPFI
Trigger: AATGAATGGCGTTTCTCTCCATATTTGCCCAGAAGA...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTCTAACATCATCCATTTaGTTTGTTTTTCTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: TALEELPVHPSATVTLEFLTSSI*FVFLFP
Trigger: GGGGAAGAGAAAAACAAACCAAATGGATGATGTTAG...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR TCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGAGTTCTTGGAGAGAATaGAGCACACACATGCACGTT +
Preference number: 2 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMSSWRE*STHMHV
Trigger: AACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACT...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATTACCATATCACTGGCTaGTACGAAGAGTCCATTCCA +
Preference number: 2 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDYHITG*YEESIP
Trigger: TGGAATGGACTCTTCGTATCAGCCAGTGATATGGTA...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGACAGAAAGAAAGCCATaGATGCACAATACTGTAATC +
Preference number: 2 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQTERKP*MHNTVI
Trigger: GATTACAGTATTGTGCATTCATGGCTTTCTTTCTGT...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACAACAGAAAGAAAGCCATaGATGCACAATACTGTAATC +
Preference number: 2 (lower is better)
Translates to: TIERETTADGQVMESVPTTERKP*MHNTVI
Trigger: GATTACAGTATTGTGCATTCATGGCTTTCTTTCTGT...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTCAACTGGGGAGGAGATaGACAGTTAATGCATTACAG +
Preference number: 2 (lower is better)
Translates to: SLTPSEMLKLKISPTTYIQLGRR*TVNALQ
Trigger: CTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTG...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCCTGAATTCCCCATTATaGCAAGAAAATGATGGGACA +
Preference number: 2 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTLNSPL*QENDGT
Trigger: TGTCCCATCATTTTCTTGTCATAATGGGGAATTCAG...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTGTGGTCCCTTGAAATaGAATTCTGCAGGAAGTAAA +
Preference number: 2 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTCGPLK*NSAGSK
Trigger: TTTACTTCCTGCAGAATTTCATTTCAAGGGACCACA...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTTGTGCTGTGGTCCCTTaGAATGAAATTCTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: SLTPSEMLKLKISPTTYICAVVP*NEILQE
Trigger: TTCCTGCAGAATTTCATTTCAAGGGACCACAGCACA...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGCTCTCTCTACCTTCCTaGCTTTTCTTTCGTGTTTCC +
Preference number: 2 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRLSLPS*LFFRVS
Trigger: GGAAACACGAAAGAAAAGTCAGGAAGGTAGAGAGAG...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR GCA 90 bp GAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTAATACACCTGCAAGGTTCTaGCTCAATGCTCCTGTAATG +
Preference number: 2 (lower is better)
Translates to: ESSIFQPRPIWKHWISCNTPARF*LNAPVM
Trigger: CATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGT...ATTACATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCAAGCAATGCCAACTGTaGTTAAAAATATGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTKQCQL*LKICSQ
Trigger: CTGGGAGCATATTTTTAAGCACAGTTGGCATTGCTT...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAAGGGGCTGTGCAATGCTaGTGCCTCCTCTGTTCTTAT +
Preference number: 2 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQGAVQC*CLLCSY
Trigger: ATAAGAACAGAGGAGGCAGCAGCATTGCACAGCCCC...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTGGATCCATTGTAGATTaGCCCCAAACCAGACACTGG +
Preference number: 2 (lower is better)
Translates to: RVQILYVYILPHPIIKIVGSIVD*PQTRHW
Trigger: CCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCC...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGGAGAAACCAGAGACATaGCAGTGTGTGACTACGTTA +
Preference number: 2 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMEKPET*QCVTTL
Trigger: TAACGTAGTCACACACTGCCATGTCTCTGGTTTCTC...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR CCA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATCTGATGGGCAGGTTATaGAATCAGTCCCTACATTTC +
Preference number: 2 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDLMGRL*NQSLHF
Trigger: GAAATGTAGGGACTGATTCCATAACCTGCCCATCAG...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR CCA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTACTTGCTGCTATAGGTaGGATTATAGGTCTCATCCC +
Preference number: 2 (lower is better)
Translates to: SLTPSEMLKLKISPTTYITCCYR*DYRSHP
Trigger: GGGATGAGACCTATAATCCCACCTATAGCAGCAAGT...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCCTTCTTATATTATACTaGAAAGGAGAGGGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTLLILY*KGEGKQ
Trigger: CTGCTTCCCCTCTCCTTTCCAGTATAATATAAGAAG...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAAAGTCCTTTCTCTTTTaGTTCCTGGGTGTCCAGAGT +
Preference number: 2 (lower is better)
Translates to: KCRRSGIITASSGQIWREKSFLF*FLGVQS
Trigger: ACTCTGGACACCCAGGAATCAAAAGAGAAAGGACTT...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR TCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTACCATATCACTGGCTaGTACGAAGAGTCCATTCCA +
Preference number: 2 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMYHITG*YEESIP
Trigger: TGGAATGGACTCTTCGTATCAGCCAGTGATATGGTA...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCTATGTAATGTCTAAATaGTGCTTCAGTGACCACGTA +
Preference number: 2 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIYVMSK*CFSDHV
Trigger: TACGTGGTCACTGAAGCATCATTTAGACATTACATA...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR TCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGCTGCAGCAACTATGTTaGTTTGCTTGTAACATGTTT +
Preference number: 2 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLLQQLC*FACNMF
Trigger: AAACATGTTACAAGCAAATCAACATAGTTGCTGCAG...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR TCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGAGGGCACCCAATTATTaGATACCCTTATCATATTGC +
Preference number: 2 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGRAPNY*IPLSYC
Trigger: GCAATATGATAAGGGTATTCAATAATTGGGTGCCCT...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR TCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGTCCCTCACTATAAAATaGATTTCTTGCAACAGGGAT +
Preference number: 2 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLSLTIK*ISCNRD
Trigger: ATCCCTGTTGCAAGAAATTCATTTTATAGTGAGGGA...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR GCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTTCAAAGCAATTCAACTaGAAGGCAAGGCAGGTGTTT +
Preference number: 2 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSSKQFN*KARQVF
Trigger: AAACACCTGCCTTGCCTTGCAGTTGAATTGCTTTGA...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCAGAAAAAGTCCTCGATaGTTATTCTGTCTATGTCCA +
Preference number: 2 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIRKSPR*LFCLCP
Trigger: TGGACATAGACAGAATAAGCATCGAGGACTTTTTCT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCATAACTGTGTGCTCTTaGTGTGTTGTACTATCCAAT +
Preference number: 2 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTITVCS*CVVLSN
Trigger: ATTGGATAGTACAACACAGCAAGAGCACACAGTTAT...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTGGTCTCAGTTCCGCCTaGAGCAACTATGTTGATTTG +
Preference number: 2 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTGLSSA*SNYVDL
Trigger: CAAATCAACATAGTTGCTGCAGGCGGAACTGAGACC...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR GCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGTGTAATTGTGACTCATaGAAATACCTTGTTAGGTCA +
Preference number: 2 (lower is better)
Translates to: PYKDGANCPCAIWAAICRCNCDS*KYLVRS
Trigger: TGACCTAACAAGGTATTTGCATGAGTCACAATTACA...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCAATTTCTTGGTTTCTTaGTCTCCCAAGCACCAAAGA +
Preference number: 2 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSNFLVS*SPKHQR
Trigger: TCTTTGGTGCTTGGGAGACCAAGAAACCAAGAAATT...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTGAGATTAGAGTAAACTaGCTCTCCATTAGCACCTTC +
Preference number: 2 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSEIRVN*LSISTF
Trigger: GAAGGTGCTAATGGAGAGCCAGTTTACTCTAATCTC...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAACTACTGCTCTCTAAGTaGCCCTACCACCATTGTCCT +
Preference number: 2 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQLLLSK*PYHHCP
Trigger: AGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAG...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR TCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTATCTGTCCTGGAAGATTaGTTCTGTTTATCAACCAGC +
Preference number: 2 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLSVLED*FCLSTS
Trigger: GCTGGTTGATAAACAGAATCAATCTTCCAGGACAGA...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTCCAGAAGGACTGTCTaGAGTCTAGGGAGAATTTTA +
Preference number: 2 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMSRRTV*SLGRIL
Trigger: TAAAATTCTCCCTAGACTTCAGACAGTCCTTCTGGA...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCGCAATTTTATTCCATTaGAGCTGCTTTGATGAACTT +
Preference number: 2 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIAILFH*SCFDEL
Trigger: AAGTTCATCAAAGCAGCTGCAATGGAATAAAATTGC...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTTCGACTATAACGAATaGGCACATTCCTCAGTCATG +
Preference number: 2 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMFDYNE*AHSSVM
Trigger: CATGACTGAGGAATGTGCCCATTCGTTATAGTCGAA...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CCA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGCATCCTGAAACACACTaGTTGCTCAGCAAAAATAGT +
Preference number: 2 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRHPETH*LLSKNS
Trigger: ACTATTTTTGCTGAGCAACCAGTGTGTTTCAGGATG...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CCA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGTGGTTCAATCAACTGTaGTCAAAGACCACTTCATCT +
Preference number: 2 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRWFNQL*SKTTSS
Trigger: AGATGAAGTGGTCTTTGACCACAGTTGATTGAACCA...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR TCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTCGAGCAGGAAGGAAGTaGTTCACTCTTGAAGACACA +
Preference number: 2 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPRAGRK*FTLEDT
Trigger: TGTGTCTTCAAGAGTGAATCACTTCCTTCCTGCTCG...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTAGACATGGCAGTGTGTaGCTACGTTACAGGAACACA +
Preference number: 2 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPRHGSV*LRYRNT
Trigger: TGTGTTCCTGTAACGTAGTCACACACTGCCATGTCT...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR TCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGGAGATCAATTGCTACTaGTGCTTCAAACAATGTTTG +
Preference number: 2 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMEINCY*CFKQCL
Trigger: CAAACATTGTTTGAAGCATCAGTAGCAATTGATCTC...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR GCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTGGCAAGGCAGGTGTTTaGTTCCAGTTCACAGTATTG +
Preference number: 2 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVGKAGV*FQFTVL
Trigger: CAATACTGTGAACTGGAAGCAAACACCTGCCTTGCC...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR CAA 90 bp GTGTATATATATGTGGACATTGATCTATATACGGCTTATATGTCATaGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAA +
Preference number: 2 (lower is better)
Translates to: VYIYVDIDLYTAYMS*SRVSSMHGYEEASK
Trigger: TTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACATATAAGCCGTATATAGATCAATGTCCACATATATATACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR TCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTCAACTGGGGAGGAGATaGACAGTTAATGCATTACAG +
Preference number: 2 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVQLGRR*TVNALQ
Trigger: CTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTG...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR GCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTACATATGTGGCTTTTTaGTTTGGGGGAGTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVTYVAF*FGGVLR
Trigger: TCTCAGCACTCCCCCAAAGCAAAAAGCCACATATGT...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR GCA 90 bp GAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTAATTTGATGCAGAAAGTCTaGAGTCCCCAAAATTACATA +
Preference number: 2 (lower is better)
Translates to: ESSIFQPRPIWKHWISCNLMQKV*SPQNYI
Trigger: TATGTAATTTTGGGGACTGCAGACTTTCTGCATCAA...ATTACATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTAAGTGGAATCATAACTaGCTCTTCTGGGCAAATATG +
Preference number: 2 (lower is better)
Translates to: RVQILYVYILPHPIIKIVKWNHN*LFWANM
Trigger: CATATTTGCCCAGAAGAGGCAGTTATGATTCCACTT...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTAGGCTACCATATCACTaGCTGATACGAAGAGTCCAT +
Preference number: 2 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVRLPYH*LIRRVH
Trigger: ATGGACTCTTCGTATCAGCCAGTGATATGGTAGCCT...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTTCTTCTGGGCAAATATaGAGAGAAACGCCATTCATT +
Preference number: 2 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTSSGQI*RETPFI
Trigger: AATGAATGGCGTTTCTCTCCATATTTGCCCAGAAGA...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR TCA 90 bp TACAAAACCGCTCAAAACTTTGTAATTGTGACTCATGCAAATACCTTGTTAGGTTTCTTTGTATCATCCTaGAACACACTGGTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: YKTAQNFVIVTHANTLLGFFVSS*NTLVAQ
Trigger: CTGAGCAACCAGTGTGTTTCAGGATGATACAAAGAA...ACCTAACAAGGTATTTGCATGAGTCACAATTACAAAGTTTTGAGCGGTTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR GCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAAGAAGCTCAGCTATGTaGCACTTAATATTTGTTATG +
Preference number: 2 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLRSSAM*HLIFVM
Trigger: CATAACAAATATTAAGTGGCACATAGCTGAGCTTCT...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR GCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAGCAATTTTATTCCATTaGAGCTGCTTTGATGAACTT +
Preference number: 2 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLAILFH*SCFDEL
Trigger: AAGTTCATCAAAGCAGCTGCAATGGAATAAAATTGC...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCTAACATCATCCATTTaGTTTGTTTTTCTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTLTSSI*FVFLFP
Trigger: GGGGAAGAGAAAAACAAACCAAATGGATGATGTTAG...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR CAA 90 bp TACAAAACCGCTCAAAACTTTGTAATTGTGACTCATGCAAATACCTaGTTAGGTCAACTTAATATTACAAATACTGCATCAGCTCGGTGC +
Preference number: 2 (lower is better)
Translates to: YKTAQNFVIVTHANT*LGQLNITNTASARC
Trigger: GCACCGAGCTGATGCAGTATTTGTAATATTAAGTTGACCTAACAAGGTATTTGCATGAGTCACAATTACAAAGTTTTGAGCGGTTTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTAATTTCTTGGTTTCTTaGTCTCCCAAGCACCAAAGA +
Preference number: 2 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVNFLVS*SPKHQR
Trigger: TCTTTGGTGCTTGGGAGACCAAGAAACCAAGAAATT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAAATTTCTTGGTTTCTTaGTCTCCCAAGCACCAAAGA +
Preference number: 2 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLINFLVS*SPKHQR
Trigger: TCTTTGGTGCTTGGGAGACCAAGAAACCAAGAAATT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR TCA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTTTTTGCAGGCTTATATaGGAACACAGATACGTGTTT +
Preference number: 2 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWAFCRLI*EHRYVF
Trigger: AAACACGTATCTGTGTTCTCATATAAGCCTGCAAAA...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR GCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTCTAAAAACAAAACAATaGCCTAAGAAGCTCAGCTAT +
Preference number: 2 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVLKTKQ*PKKLSY
Trigger: ATAGCTGAGCTTCTTAGGGCATTGTTTTGTTTTTAG...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR CCA 72 bp ATCCCTGTGTCTGCTTTGGGAACGCCCCCTTATCGCTaGGTTCTCAGCCCAGGCATCTGGGACCTCTGGCTA +
Preference number: 3 (lower is better)
Translates to: IPVSALGTPPYR*VLSPGIWDLWL
Trigger: TAGCCAGAGGTCCCAGATGCCTGGGCTGAGAACCCAGCGATAAGGGGGCGTTCCCAAAGCAGACACAGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR GCA 72 bp GCCATCCTAACTGCCACTGTGCCTGGGGCTGTGCAATaGTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGC +
Preference number: 3 (lower is better)
Translates to: AILTATVPGAVQ*CCLLCSYPCVC
Trigger: GCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTGCACAGCCCCAGGCACAGTGGCAGTTAGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR GCA 72 bp GTTGGCATAGATCCCTGCTTCCCAGCGCAAAGCCAGTaGGCTCTTTCTTCGATTAACCCGTGTGGCCTCGAG +
Preference number: 3 (lower is better)
Translates to: VGIDPCFPAQSQ*ALSSINPCGLE
Trigger: CTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTGGGAAGCAGGGATCTATGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
3UTR GCA 72 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTaGTTTGGGAACGCCCCCTTATCGCTGGGTTCTCAG +
Preference number: 3 (lower is better)
Translates to: QCCCLLCSYPCV*FGNAPLSLGSQ
Trigger: CTGAGAACCCAGCGATAAGGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CAA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGTGGATCCATTGTAGATaGGCCCCAAACCAGACACTG +
Preference number: 3 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGWIHCR*APNQTL
Trigger: CAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR GCA 72 bp ATCCTAACTGCCACTGTGCCTGGGGCTGTGCAATGCTaGTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTT +
Preference number: 3 (lower is better)
Translates to: ILTATVPGAVQC*CLLCSYPCVCF
Trigger: AAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTGCACAGCCCCAGGCACAGTGGCAGTTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CAA 90 bp CTTTCTTCGATTAACCCGTGTGGCCTCGAGGACACTACTATCATCCATTCTCTCGTCTGCATCAGATTCTaGGGCCGCTGGGTTCCGGCA +
Preference number: 3 (lower is better)
Translates to: LSSINPCGLEDTTIIHSLVCIRF*GRWVPA
Trigger: TGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGAC...GAGAGAATGGATGATAGTAGTGTCCTCGAGGCCACACGGGTTAATCGAAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
3UTR GCA 72 bp GCCCCTTTGGGCCACACCTGCAAGGTTCTGCCTCAATaGTCCTGTAATGAAATTCACAGCTCTGAAGAAGGC +
Preference number: 3 (lower is better)
Translates to: APLGHTCKVLPQ*SCNEIHSSEEG
Trigger: GCCTTCTTCAGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCCCAAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR CCA 72 bp TTTTGGAGTTGTCTCCATGACAGCAGTGTTCACAGCTaGGCTGGAGTTGGGCCTGTTGGAGAGATTCTGGTG +
Preference number: 3 (lower is better)
Translates to: FWSCLHDSSVHS*AGVGPVGEILV
Trigger: CACCAGAATCTCTCCAACAGGCCCAACTCCAGCCCAGCTGTGAACACTGCTGTCATGGAGACAACTCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CAA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGAAAGTCCTTTCTCTTTaGATTCCTGGGTGTCCAGAG +
Preference number: 3 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGKVLSL*IPGCPE
Trigger: CTCTGGACACCCAGGAATCAAAAGAGAAAGGACTTT...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR TCA 72 bp CACAGTATTGCAGTTAGTGGTACAGTGAGGTCTACGTaGGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGG +
Preference number: 3 (lower is better)
Translates to: HSIAVSGTVRST*VVESTGCPEER
Trigger: CCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTACCACTAACTGCAATACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
3UTR TCA 72 bp TGCTTCCAGTTCACAGTATTGCAGTTAGTGGTACAGTaGGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCC +
Preference number: 3 (lower is better)
Translates to: CFQFTVLQLVVQ*GLREWWRVQAA
Trigger: GGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTACCACTAACTGCAATACTGTGAACTGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
3UTR CCA 72 bp AATTCTCACTCCACTCCTGAAGCCAGCAAACAGCTCTaGAGGAATTACCTGTACACCCAAGTGCCACGGTCA +
Preference number: 3 (lower is better)
Translates to: NSHSTPEASKQL*RNYLYTQVPRS
Trigger: TGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGTTTGCTGGCTTCAGGAGTGGAGTGAGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CAA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGTCAGTTGTTAATTTCTaGGTTTCTTGGTCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGSVVNF*VSWSPK
Trigger: CTTGGGAGACCAAGAAACCAAGAAATTAACAACTGA...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CAA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCGTGGCCCTACCACCATaGTCCTTCATCGCCCAGAGA +
Preference number: 3 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSVALPP*SFIAQR
Trigger: TCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CAA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCAGTTTGGATCAGGCATaGCCTGGTGGCCTCTGTGTA +
Preference number: 3 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTSLDQA*PGGLCV
Trigger: TACACAGAGGCCACCAGGCAATGCCTGATCCAAACT...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 72 bp TTGGGTAGTAGAAAAAGGCCTCATCCTGAGGAAGGATaGTGCTTGGGAAGAGAGTCTCACAAGAGTGGTGAG +
Preference number: 3 (lower is better)
Translates to: LGSRKRPHPEEG*CLGRESHKSGE
Trigger: CTCACCACTCTTGTGAGACTCTCTTCCCAAGCATCATCCTTCCTCAGGATGAGGCCTTTTTCTACTACCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR GCA 72 bp CCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCCTaGAGCAACTATGTTGATTTGCTTGTAACATGTTTT +
Preference number: 3 (lower is better)
Translates to: PSSPREAGLSSA*SNYVDLLVTCF
Trigger: AAAACATGTTACAAGCAAATCAACATAGTTGCTGCAGGCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CAA 90 bp GCCAGTGCGCTCTTTCTTCGATTAACCCGTGTGGCCTCGAGGACACTACTATCATCAGTTGTTAATTTCTaGGTTTCTTGGTCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: ASALFLRLTRVASRTLLSSVVNF*VSWSPK
Trigger: CTTGGGAGACCAAGAAACCAAGAAATTAACAACTGA...TGATAGTAGTGTCCTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
3UTR-3UTR CAA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGTGGCCCTACCACCATaGTCCTTCATCGCCCAGAGA +
Preference number: 3 (lower is better)
Translates to: MERNAIHFMAAGENGVNAVALPP*SFIAQR
Trigger: TCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CAA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCCCAACCAAGGCCTATTaGGAAACACTGGATCTCATG +
Preference number: 3 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTPTKAY*ETLDLM
Trigger: CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGG...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR GCA 72 bp GCAAACAGCTCTGGAGGAATTACCTGTACACCCAAGTaGCACGGTCACTCTGGAATTTTAATACACACACAC +
Preference number: 3 (lower is better)
Translates to: ANSSGGITCTPK*HGHSGILIHTH
Trigger: GTGTGTGTGTATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR CCA 72 bp GTAGAAAAAGGCCTCATCCTGAGGAAGGATGATGCTTaGGAAGAGAGTCTCACAAGAGTGGTGAGTAGTTTC +
Preference number: 3 (lower is better)
Translates to: VEKGLILRKDDA*EESLTRVVSSF
Trigger: GAAACTACTCACCACTCTTGTGAGACTCTCTTCCCAAGCATCATCCTTCCTCAGGATGAGGCCTTTTTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTCAGTTGTTAATTTCTaGGTTTCTTGGTCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSSVVNF*VSWSPK
Trigger: CTTGGGAGACCAAGAAACCAAGAAATTAACAACTGA...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000495980.1
3UTR-3UTR CAA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGAGTCTGTTTTTACACTaGGCCTCAACATTTTGCTCC +
Preference number: 3 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQSLFLH*ASTFCS
Trigger: GGAGCAAAATGTTGAGGCCAAGTGTAAAAACAGACT...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CAA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTTGTGCTCTTGCTGTGTaGTACTATCCAATAGAACAA +
Preference number: 3 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSCALAV*YYPIEQ
Trigger: TTGTTCTATTGGATAGTACAACACAGCAAGAGCACA...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 72 bp CAGTGTGTGACTACGTTACAGGAACACACTACAAAATaGAACCCCCAGTGCCAATGGGTTCAATTCCAGTCA +
Preference number: 3 (lower is better)
Translates to: QCVTTLQEHTTK*NPQCQWVQFQS
Trigger: TGACTGGAATTGAACCCATTGGCACTGGGGGTTTCATTTTGTAGTGTGTTCCTGTAACGTAGTCACACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR GCA 72 bp GTTGGAGCTACATACAGAATAGTTTGGATCAGGCATTaGCTGGTGGCCTCTGTGTATATCAAGACCTGTCAT +
Preference number: 3 (lower is better)
Translates to: VGATYRIVWIRH*LVASVYIKTCH
Trigger: ATGACAGGTCTTGATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGCTCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR GCA 72 bp TTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTaGCAGAATAGGATATCACAGAATTGGAGTTGGAGC +
Preference number: 3 (lower is better)
Translates to: FQNPAKNRTLPT*QNRISQNWSWS
Trigger: GCTCCAACTCCAATTCTGTGATATCCTATTCTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR CCA 72 bp CAATTCCAGTCAAGTGAGTTAAGGCTACCATATCACTaGCTGATACGAAGAGTCCATTCCAATCGAGCAGGA +
Preference number: 3 (lower is better)
Translates to: QFQSSELRLPYH*LIRRVHSNRAG
Trigger: TCCTGCTCGATTGGAATGGACTCTTCGTATCAGCCAGTGATATGGTAGCCTTAACTCACTTGACTGGAATTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR CCA 72 bp CACAGAATTGGAGTTGGAGCTACATACAGAATAGTTTaGATCAGGCATTGCCTGGTGGCCTCTGTGTATATC +
Preference number: 3 (lower is better)
Translates to: HRIGVGATYRIV*IRHCLVASVYI
Trigger: GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGCTCCAACTCCAATTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CAA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGAAAGTCCTTTCTCTTTaGATTCCTGGGTGTCCAGAG +
Preference number: 3 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGKVLSL*IPGCPE
Trigger: CTCTGGACACCCAGGAATCAAAAGAGAAAGGACTTT...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CAA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTTACATATGTGGCTTTTaGCTTTGGGGGAGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: SLTPSEMLKLKISPTTYIYICGF*LWGSAE
Trigger: CTCAGCACTCCCCCAAAGCAAAAAGCCACATATGTA...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 72 bp GTTCATCGGTTAAACCATAGAAAGAGAGACAACCGCTaGTGGGCAGGTTATGGAATCAGTCCCTACATTTCA +
Preference number: 3 (lower is better)
Translates to: VHRLNHRKRDNR*WAGYGISPYIS
Trigger: TGAAATGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGTTTAACCGATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR TCA 72 bp GAAAGTTTTCCTGGTAATACCAGAAGAAGGCCTTTGTaGAGTGAACTGGTGGTAGCAGGAATCAAACATCCC +
Preference number: 3 (lower is better)
Translates to: ESFPGNTRRRPL*SELVVAGIKHP
Trigger: GGGATGTTTGATTCCTGCTACCACCAGTTCACTTCACAAAGGCCTTCTTCTGGTATTACCAGGAAAACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 72 bp CTGCCACTGACAGACCCTGTTTCCATAATTTCTGGATaGGAAAGCCAAGTCATGTCAGTAGTTAATCAGCTC +
Preference number: 3 (lower is better)
Translates to: LPLTDPVSIISG*ESQVMSVVNQL
Trigger: GAGCTGATTAACTACTGACATGACTTGGCTTTCTCATCCAGAAATTATGGAAACAGGGTCTGTCAGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR CCA 72 bp CCCACCTGCCAGAATAGGATATCACAGAATTGGAGTTaGAGCTACATACAGAATAGTTTGGATCAGGCATTG +
Preference number: 3 (lower is better)
Translates to: PTCQNRISQNWS*SYIQNSLDQAL
Trigger: CAATGCCTGATCCAAACTATTCTGTATGTAGCTCCAACTCCAATTCTGTGATATCCTATTCTGGCAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR CCA 72 bp AGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATaGAGAGAAACGCCATTCATTTTATGGCTGCTGGAG +
Preference number: 3 (lower is better)
Translates to: RSGIITASSGQI*RETPFILWLLE
Trigger: CTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CAA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTAACTGTGTTTTAGGTTaGGCCATAAGGGCATTCCCT +
Preference number: 3 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSNCVLG*AIRAFP
Trigger: AGGGAATGCCCTTATGGCCAAACCTAAAACACAGTT...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CAA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGCATCTGCGTTTTATATaGGCAGGGCTAATATTTCTT +
Preference number: 3 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQHLRFI*AGLIFL
Trigger: AAGAAATATTAGCCCTGCCAATATAAAACGCAGATG...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CAA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATACCTGAAACACACTGGTaGCTCAGCAAAAATAGTATC +
Preference number: 3 (lower is better)
Translates to: SGGITCTPKCHGHSGILIPETHW*LSKNSI
Trigger: GATACTATTTTTGCTGAGCAACCAGTGTGTTTCAGG...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR TCA 72 bp CTGCTTATGTGTAGACTGAAGATGGTCAGAGGGCTCTaGCTCACCGTTTCATATATATTTCTCAAATGCACC +
Preference number: 3 (lower is better)
Translates to: LLMCRLKMVRGL*LTVSYIFLKCT
Trigger: GGTGCATTTGAGAAATATATATGAAACGGTGAGTCAGAGCCCTCTGACCATCTTCAGTCTACACATAAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 72 bp TCAATTATTGCCGCTCTAAAAATGCCCCCACCATCTTaGACCAAGTTGTTCAACGCGTACAGATTCTATACG +
Preference number: 3 (lower is better)
Translates to: SIIAALKMPPPS*TKLFNAYRFYT
Trigger: CGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCAATAATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR CCA 72 bp ACTCTTCCCACCTGCCAGAATAGGATATCACAGAATTaGAGTTGGAGCTACATACAGAATAGTTTGGATCAG +
Preference number: 3 (lower is better)
Translates to: TLPTCQNRISQN*SWSYIQNSLDQ
Trigger: CTGATCCAAACTATTCTGTATGTAGCTCCAACTCCAATTCTGTGATATCCTATTCTGGCAGGTGGGAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CAA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGTTCTCATGGCCAGAATaGAAAATTTTCTCATCCAGA +
Preference number: 3 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLFSWPE*KIFSSR
Trigger: TCTGGATGAGAAAATTTTCAATTCTGGCCATGAGAA...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR CCA 72 bp AAGAAAAGAGTATGGATGCAAGGCTTTGTAATCAACTaGGGAGGAGATGAACAGTTAATGCATTACAGCACC +
Preference number: 3 (lower is better)
Translates to: KKRVWMQGFVIN*GGDEQLMHYST
Trigger: GGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCTTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR CCA 72 bp GAGATTCTGGTGATGAAGGAATTTAAGCGATTTGCATaGGAACCAGAGGGGTTATTTCTCTTGAAAATGGAG +
Preference number: 3 (lower is better)
Translates to: EILVMKEFKRFA*EPEGLFLLKME
Trigger: CTCCATTTTCAAGAGAAATAACCCCTCTGGTTCCCATGCAAATCGCTTAAATTCCTTCATCACCAGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR CCA 72 bp ACATTTTCATGGGATTATAATAGGATCTTCAGTGAGTaGAGCAAGAAGATAGACAGCAGTAATCCGGAAGGC +
Preference number: 3 (lower is better)
Translates to: TFSWDYNRIFSE*SKKIDSSNPEG
Trigger: GCCTTCCGGATTACTGCTGTCTATCTTCTTGCTCCACTCACTGAAGATCCTATTATAATCCCATGAAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CAA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGTCAGTTGTTAATTTCTaGGTTTCTTGGTCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRSVVNF*VSWSPK
Trigger: CTTGGGAGACCAAGAAACCAAGAAATTAACAACTGA...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR-3UTR CAA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTAAAGTCCTTTCTCTTTaGATTCCTGGGTGTCCAGAG +
Preference number: 3 (lower is better)
Translates to: RVQILYVYILPHPIIKIVKVLSL*IPGCPE
Trigger: CTCTGGACACCCAGGAATCAAAAGAGAAAGGACTTT...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CAA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTACAAGGCTTGTGAATTaGCCTAAGTTTGGAGATCAA +
Preference number: 3 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSTRLVN*PKFGDQ
Trigger: TTGATCTCCAAACTTAGGCAAATTCACAAGCCTTGT...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CAA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTAGGCTGTCCAGATCTTaGATGCAGAAAGTCTGCAGT +
Preference number: 3 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWARLSRS*MQKVCS
Trigger: ACTGCAGACTTTCTGCATCAAAGATCTGGACAGCCT...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR-3UTR CAA 90 bp GAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTAATGCAGGGTGTAAAATTTaGCAGGCTTATATGAGAACA +
Preference number: 3 (lower is better)
Translates to: ESSIFQPRPIWKHWISCNAGCKI*QAYMRT
Trigger: TGTTCTCATATAAGCCTGCAAAATTTTACACCCTGC...ATTACATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 72 bp ATGTTCATAATCACAGCTCCATGTACACTATCATCATaGAGGGTAGTTACTTGCTGCTATAGGTGGGATTAT +
Preference number: 3 (lower is better)
Translates to: MFIITAPCTLSS*RVVTCCYRWDY
Trigger: ATAATCCCACCTATAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATGAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR TCA 72 bp AGCGATTTGCATGGGAACCAGAGGGGTTATTTCTCTTaGAAATGGAGTAGATATAACCTTGTCTTGTTAGAA +
Preference number: 3 (lower is better)
Translates to: SDLHGNQRGYFS*KWSRYNLVLLE
Trigger: TTCTAACAAGACAAGGTTATATCTACTCCATTTTCAAGAGAAATAACCCCTCTGGTTCCCATGCAAATCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 72 bp AATGAAAGTATTTACAGAGACATCACTCACCCCGAGTaGGATGCTAAAGCTGAAAATTTCACCAACAACCTA +
Preference number: 3 (lower is better)
Translates to: NESIYRDITHPE*DAKAENFTNNL
Trigger: TAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTCTGTAAATACTTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR GCA 72 bp CTCTTCTGGAATCTCCAGAAGCTAAAAACAAAACAATaGCCTAAGAAGCTCAGCTATGTGCCACTTAATATT +
Preference number: 3 (lower is better)
Translates to: LFWNLQKLKTKQ*PKKLSYVPLNI
Trigger: AATATTAAGTGGCACATAGCTGAGCTTCTTAGGGCATTGTTTTGTTTTTAGCTTCTGGAGATTCCAGAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR-3UTR CAA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTCAGTTGTTAATTTCTaGGTTTCTTGGTCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFSVVNF*VSWSPK
Trigger: CTTGGGAGACCAAGAAACCAAGAAATTAACAACTGA...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR-3UTR CAA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTAGATTGTCCAAGACATaGAAACTGTTTTCTCCCTCT +
Preference number: 3 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWARLSKT*KLFSPS
Trigger: AGAGGGAGAAAACAGTTTCAATGTCTTGGACAATCT...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 72 bp TATGAAGTTTCTGAAACACCTATGTCTTACTTATGCTaGGAATCTGTGGTTTCAATAGCAAATGTGCATGTG +
Preference number: 3 (lower is better)
Translates to: YEVSETPMSYLC*ESVVSIANVHV
Trigger: CACATGCACATTTGCTATTGAAACCACAGATTCTCAGCATAAGTAAGACATAGGTGTTTCAGAAACTTCATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR TCA 72 bp GGAATTTTAATACACACACACACACACCCTTACTCATaGACATACACATTTTACAAACACACAATGGTGTAC +
Preference number: 3 (lower is better)
Translates to: GILIHTHTHPYS*TYTFYKHTMVY
Trigger: GTACACCATTGTGTGTTTGTAAAATGTGTATGTTCATGAGTAAGGGTGTGTGTGTGTGTGTATTAAAATTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR CCA 72 bp TATATGCGCCATATTCAAACACACCTTCATTTAGTGTaGCTACAAATAGCTCGAATAAAGGTAACACATCTT +
Preference number: 3 (lower is better)
Translates to: YMRHIQTHLHLV*LQIARIKVTHL
Trigger: AAGATGTGTTACCTTTATTCGAGCTATTTGTAGCCACACTAAATGAAGGTGTGTTTGAATATGGCGCATATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp AGGGTCTGCATCAGATTCTTGGGCCGCTGGGTTCCGGCAGCCTCTTCAGGGGCTGGGGCTAAGTCAGGCTaGAAGCTGGGGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: RVCIRFLGRWVPAASSGAGAKSG*KLGPSV
Trigger: CACTGAAGGCCCCAGCTTGCAGCCTGACTTAGCCCC...AGCCCCTGAAGAGGCTGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR GCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATGCAGTCCTGGGGTTCTaGTCCAGTCCAGCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHAVLGF*SSPAPR
Trigger: GCGCGGCGCTGGACTGGAGCAGAACCCCAGGACTGC...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000434623.6
CDS-3UTR CCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCAGCCTGGGTGTACTCTaGCCCTTGGCCACCGCTTGC +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRSLGVL*PLATAC
Trigger: GCAAGCGGTGGCCAAGGGCCAGAGTACACCCAGGCT...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGCTCCAGCCGCTCTGCTaGTCCCGTCCTGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLLQPLC*SRPAQV
Trigger: CACCTGGGCAGGACGGGACCAGCAGAGCGGCTGGAG...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGCTCCAGCCGCTCTGCTaGTCCCGTCCTGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGLQPLC*SRPAQV
Trigger: CACCTGGGCAGGACGGGACCAGCAGAGCGGCTGGAG...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR TCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATTGTGGAGCTGGGGCTaGCAGGCACCTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPLWSWG*QAPAGC
Trigger: ACAGCCTGCAGGTGCCTGTCAGCCCCAGCTCCACAA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCACTGTCCCTTGGCGGCTaGGGCACCACTGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPLSLGG*GTTVFW
Trigger: CCAGAAGACAGTGGTGCCTCAGCCGCCAAGGGACAG...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCGGGGCTAAGTCAGGCTaGAAGCTGGGGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRGAKSG*KLGPSV
Trigger: CACTGAAGGCCCCAGCTTGCAGCCTGACTTAGCCCC...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCCCAGCGGGTATGCCCTaGAGCAGCCATTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRPAGMP*SSHFSR
Trigger: TCGGGAGAAATGGCTGCTGCAGGGCATACCCGCTGG...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCCAGCCTGGGCCCTACTaGTCTCTAAGTGGCCCTACC +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRQPGPY*SLSGPT
Trigger: GGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTG...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGTTTGCCTCCGGCCCTaGAGCGCTGGGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEVCLRP*SAGGLG
Trigger: GCCCAAGCCCCCAGCGCTGCAGGGCCGGAGGCAAAC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATCAGTGGGTTCTGGCTaGGTCGCCTCGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPSVGSG*VASWTG
Trigger: CCCTGTCCACGAGGCGACCCAGCCAGAACCCACTGA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGTTGTGGAGCTGGGGCTaGCAGGCACCTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGLWSWG*QAPAGC
Trigger: ACAGCCTGCAGGTGCCTGTCAGCCCCAGCTCCACAA...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGGGCTCTGTGGTGTCTaGGACCGGCCTCCCGGACAC +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEGLCGV*DRPPGH
Trigger: GTGTCCGGGAGGCCGGTCTCAGACACCACAGAGCCC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGAAGAGGCAGGGGCTGTaGAGAGCTGCGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGKRQGL*RAAMGA
Trigger: AGCCCCCATCGCAGCTCTGCACAGCCCCTGCCTCTT...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGGTTGCCCTGGCTTCCTaGTGCCGATGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGVALAS*CRWGLQ
Trigger: CTGGAGACCCCATCGGCAGCAGGAAGCCAGGGCAAC...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCTCATCCTCTTCAGACTaGCGCCTCCTGGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRSSSSD*RLLASS
Trigger: GGAGGAAGCCAGGAGGCGGCAGTCTGAAGAGGATGA...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGAAGCGCCGCCGCTCACTaGATCTCCCGGTCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRSAAAH*ISRSPP
Trigger: CGGCGGCGACCGGGAGATGCAGTGAGCGGCGGCGCT...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAAGCTGGGGCCTTCAGTaGTGGGGGATGGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPSWGLQ*WGMEEV
Trigger: AACCTCCTCCATCCCCCACCACTGAAGGCCCCAGCT...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCAGATTCTTGGGCCGCTaGGTTCCGGCAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRRFLGR*VPAASS
Trigger: TGAAGAGGCTGCCGGAACCCAGCGGCCCAAGAATCT...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCCGCCTCTGCCATCCTaGAGAAGGGCACACAGGCAG +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHPPLPS*RRAHRQ
Trigger: CTGCCTGTGTGCCCTTCTCCAGGATGGCAGAGGCGG...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGCAGACTGCCGCCTCCTaGCTTCCTCCTCTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLQTAAS*LPPLRQ
Trigger: CTGCCGAAGAGGAGGAAGCCAGGAGGCGGCAGTCTG...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAGCAGCGCTGGGGGCTTaGGCCTGCTGCCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKAALGA*ACCPGF
Trigger: GAACCCAGGGCAGCAGGCCCAAGCCCCCAGCGCTGC...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATTACTGAGCTCGATGTaGGGAGGTGCCTGCCGGCTA +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPLLSSM*GGACRL
Trigger: TAGCCGGCAGGCACCTCCTCACATCGAGCTCAGTAA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAGCTCTGAGGCTTTTCTaGGCCGAAAGCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPALRLF*AESRSF
Trigger: GAAGCTGCGGCTTTCGGCTCAGAAAAGCCTCAGAGC...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAGATGGGGGCTGCTGCTaGTGCTGCTGTAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPDGGCC*CCCNCF
Trigger: GAAGCAGTTACAGCAGCAGCAGCAGCAGCCCCCATC...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATTGCGATGGGGGCTGCTaGTGCTGCTGCTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHCDGGC*CCCCNC
Trigger: GCAGTTACAGCAGCAGCAGCAGCAGCCCCCATCGCA...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCGGGGCTAAGTCAGGCTaGAAGCTGGGGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPGAKSG*KLGPSV
Trigger: CACTGAAGGCCCCAGCTTGCAGCCTGACTTAGCCCC...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACTGGGGGCTTGGGCCTaGTGCCCTGGGTTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKLGAWA*CPGFPE
Trigger: TTCCGGGAACCCAGGGCAGCAGGCCCAAGCCCCCAG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATCTTTCAGTGGGTTCTaGCTGGGTCGCCTCGTGGAC +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPSFSGF*LGRLVD
Trigger: GTCCACGAGGCGACCCAGCCAGAACCCACTGAAAGA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCAGCGCATCTCTAGGCTaGCTGGGGGAATGGCCATTT +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRSASLG*LGEWPF
Trigger: AAATGGCCATTCCCCCAGCCAGCCTAGAGATGCGCT...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAAGATTCTTGGGCCGCTaGGTTCCGGCAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPRFLGR*VPAASS
Trigger: TGAAGAGGCTGCCGGAACCCAGCGGCCCAAGAATCT...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGTTACTGAGCTCGATGTaGGGAGGTGCCTGCCGGCTA +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGLLSSM*GGACRL
Trigger: TAGCCGGCAGGCACCTCCTCACATCGAGCTCAGTAA...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATGTGGCTTGTCTGAGTTaGCTGACCCCAGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHVACLS*LTPEAC
Trigger: ACAGGCCTCTGGGGTCAGTCAACTCAGACAAGCCAC...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTGGGGCCCCCTTTCCCTaGGCGCCCTGTCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFGAPFP*APCLQQ
Trigger: CTGCTGAAGACAGGGCGCTCAGGGAAAGGGGGCCCC...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATCCTCTTCCCTTTCCTaGGCTGCTCGGATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPSSSLS*AARISS
Trigger: GGAAGAGATCCGAGCAGCTCAGGAAAGGGAAGAGGA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGCTCGATGTGAGGAGGTaGCTGCCGGCTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLLDVRR*LPASCS
Trigger: AGAACAGCTAGCCGGCAGGCACCTCCTCACATCGAG...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGGATGGGGGCTGCTGCTaGTGCTGCTGTAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGDGGCC*CCCNCF
Trigger: GAAGCAGTTACAGCAGCAGCAGCAGCAGCCCCCATC...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGGGGCTGTGCAGAGCTaGGATGGGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSGAVQS*DGGCCC
Trigger: GCAGCAGCAGCCCCCATCGCAGCTCTGCACAGCCCC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTGGGGCTGTGCAGAGCTaGGATGGGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFGAVQS*DGGCCC
Trigger: GCAGCAGCAGCCCCCATCGCAGCTCTGCACAGCCCC...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGCCCTTGGCCACCGCTTaGCTGGAATTCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLPLATA*LEFSIS
Trigger: GCTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGG...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCGCTCTGCTCCATCCCTaGTGGTTTTGGACACAGCTT +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRALLHP*WFWTQL
Trigger: AAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGC...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCAGGTCCCTGTTGCTCTaGTCCATCCCTGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRRSLLL*SIPAGF
Trigger: AAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCT...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCGCTTCTCAGCTCAGCTaGCTCCGAGTACTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRASQLS*LRVLAE
Trigger: TTCAGCAAGTACTCGGAGGCAGCTGAGCTGAGAAGC...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAGTTGGCATAGATCCCTaGTTCCCAGCGCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPVGIDP*FPAQSQ
Trigger: CTGGCTTTGCGCTGGGAAGCAGGGATCTATGCCAAC...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGTGCAATTCCGCCTCTaGCATCCTGGAGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLVQFRL*HPGEGH
Trigger: GTGCCCTTCTCCAGGATGGCAGAGGCGGAATTGCAC...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGCGACTCCAGCCGCTCTaGTGGTCCCGTCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQRLQPL*WSRPAQ
Trigger: CTGGGCAGGACGGGACCAGCAGAGCGGCTGGAGTCG...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGGGCTGATCCAAGTTTaGCTCCGGCCCTGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEGLIQV*LRPCSA
Trigger: AGCGCTGCAGGGCCGGAGGCAAACTTGGATCAGCCC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCCCTGGGGCTGTGCAATaGTGCTGCCTCCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPPGAVQ*CCLLCS
Trigger: AGAACAGAGGAGGCAGCAGCATTGCACAGCCCCAGG...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCTGGCCACCGCTTGCCTaGAATTCTCCATCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRWPPLA*NSPSAE
Trigger: TTCAGCTGATGGAGAATTCCAGGCAAGCGGTGGCCA...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGGTGTACTCTGGCCCTTaGCCACCGCTTGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGVYSGP*PPLAWN
Trigger: ATTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACAC...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGCTTCCTGCTGCCGATaGGGTCTCCAGGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSASCCR*GLQGTG
Trigger: CCCGGTGCCCTGGAGACCCCATCGGCAGCAGGAAGC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGTCCCCCAGCGTaGAGGAAGGGGAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPESPPA*RKGNRN
Trigger: GTTTCTATTCCCCTTCCTCCACGCTGGGGGACTCTC...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATTCTGCATCAGATTCTTaGGCCGCTGGGTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHSASDS*AAGFRQ
Trigger: CTGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGA...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCCGCCTCTGCCATCCTaGAGAAGGGCACACAGGCAG +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEPPLPS*RRAHRQ
Trigger: CTGCCTGTGTGCCCTTCTCCAGGATGGCAGAGGCGG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000483909.5
CDS-3UTR CCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCAGACTGCCGCCTCCTaGCTTCCTCCTCTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEQTAAS*LPPLRQ
Trigger: CTGCCGAAGAGGAGGAAGCCAGGAGGCGGCAGTCTG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGACGCCCAGGGACGGCTaGGGATCCGCTCCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLTPRDG*GSAPGA
Trigger: CGCCCCTGGAGCGGATCCCCAGCCGTCCCTGGGCGT...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR CCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGGGATGAGGGCTCTGTaGTGTCTGAGACCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEGMRAL*CLRPAS
Trigger: GGAGGCCGGTCTCAGACACCACAGAGCCCTCATCCC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp GGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTTATTCGTTGTCCCGGGGGCGCAGTCCTaGGGTTCTGCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: GLPSTKDASWVEGSLFVVPGAQS*GSAPVQ
Trigger: CTGGACTGGAGCAGAACCCCAGGACTGCGCCCCCGG...GACAACGAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR TCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGCCATTATGCGGGGGTaGATAGAAAGCGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLAIMRG*IESGGM
Trigger: CATCCCTCCGCTTTCTATTCACCCCCGCATAATGGC...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCCAGGGCTGCTATTACTaGGCTCGATGTGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPQGCYY*ARCEEV
Trigger: CACCTCCTCACATCGAGCTCAGTAATAGCAGCCCTG...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGCAGGGCTGCTATTACTaGGCTCGATGTGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLQGCYY*ARCEEV
Trigger: CACCTCCTCACATCGAGCTCAGTAATAGCAGCCCTG...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCGCCTGTAGAAAGGCTTaGTGGAGAACAGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPACRKA*WRTAWV
Trigger: CACCCAGGCTGTTCTCCATCAAGCCTTTCTACAGGC...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAAGGACTGTGGTATCCTaGGACCTCACCGACAATTCG +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPRTVVS*DLTDNS
Trigger: CGAATTGTCGGTGAGGTCTCAGGATACCACAGTCCT...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATTCCTGGACCTCAGCTTaGAAGGCCCAACCATCACGT +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHSWTSA*KAQPSR
Trigger: ACGTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGA...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGTCCTCTTCCCTTTCCTaGGCTGCTCGGATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLSSSLS*AARISS
Trigger: GGAAGAGATCCGAGCAGCTCAGGAAAGGGAAGAGGA...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAGCCATTTGTTCTTTCTaGCTCTGCCATGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPAICSF*LCHGVR
Trigger: CCTGACCCCATGGCAGAGGCAGAAAGAACAAATGGC...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCGGTTGTCTCATTGGATaGCCCGCTGTCACTGATGTT +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRGCLIG*PAVTDV
Trigger: AACATCAGTGACAGCGGGGCATCCAATGAGACAACC...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTATCGGGCCACTGGGCTaGACAGCTGGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSIGPLG*TAGSGW
Trigger: CCAGCCACTGCCAGCTGTGCAGCCCAGTGGCCCGAT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGATCGGGCCACTGGGCTaGACAGCTGGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQIGPLG*TAGSGW
Trigger: CCAGCCACTGCCAGCTGTGCAGCCCAGTGGCCCGAT...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAGCTTCTCAGCTCAGCTaGCTCCGAGTACTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPASQLS*LRVLAE
Trigger: TTCAGCAAGTACTCGGAGGCAGCTGAGCTGAGAAGC...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCCAGCGGGTATGCCCTaGAGCAGCCATTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEPAGMP*SSHFSR
Trigger: TCGGGAGAAATGGCTGCTGCAGGGCATACCCGCTGG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGCTGGGGGCTTGGGCCTaGTGCCCTGGGTTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQLGAWA*CPGFPE
Trigger: TTCCGGGAACCCAGGGCAGCAGGCCCAAGCCCCCAG...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAGGGCTGATCCAAGTTTaGCTCCGGCCCTGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKGLIQV*LRPCSA
Trigger: AGCGCTGCAGGGCCGGAGGCAAACTTGGATCAGCCC...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp TTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTTATTCGTTGGCAGTCCTGGGGTTCTaGTCCAGTCCAGCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: LVSQAPKTLPGLKEVYSLAVLGF*SSPAPR
Trigger: GCGCGGCGCTGGACTGGAGCAGAACCCCAGGACTGC...CAACGAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR CCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGCAGGCTCCAGGAGGGTaGCACTATAGTTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGQAPGG*HYSCLP
Trigger: AGGGAGACAACTATAGTGCCACCCTCCTGGAGCCTG...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATTTCTGCCTCTGCCATaGGGTCAGGGCTGCTATTAC +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPFLPLP*GQGCYY
Trigger: GTAATAGCAGCCCTGACCCCATGGCAGAGGCAGAAA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGTCCCCCGACAGAAGGTaGTCTCGGATTAGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLSPDRR*SRISQW
Trigger: CCACTGACTAATCCGAGACCACCTTCTGTCGGGGGA...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGGAGAGTCCCCCAGCGTaGAGGAAGGGGAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGESPPA*RKGNRN
Trigger: GTTTCTATTCCCCTTCCTCCACGCTGGGGGACTCTC...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCAGAAGACACCTGAGGTaGCTCAAACATGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRRRHLR*LKHALR
Trigger: CCTCAGAGCATGTTTGAGCCACCTCAGGTGTCTTCT...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCGCAGCGCTGGGGGCTTaGGCCTGCTGCCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIAALGA*ACCPGF
Trigger: GAACCCAGGGCAGCAGGCCCAAGCCCCCAGCGCTGC...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAGGGATGAGGGCTCTGTaGTGTCTGAGACCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKGMRAL*CLRPAS
Trigger: GGAGGCCGGTCTCAGACACCACAGAGCCCTCATCCC...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATCCAGGGATTCGTGGTaGTCAGTAAGGAGGCCATTA +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPSRDSW*SVRRPL
Trigger: TAATGGCCTCCTTACTGATCACCACGAATCCCTGGA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTTGTGGAGCTGGGGCTaGCAGGCACCTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSLWSWG*QAPAGC
Trigger: ACAGCCTGCAGGTGCCTGTCAGCCCCAGCTCCACAA...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGTCGGCTATGGCTTGTTaGATGGCATTCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGSAMAC*MAFCTR
Trigger: CCTGGTGCAGAATGCCATTCAACAAGCCATAGCCGA...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCTCGGCTATGGCTTGTTaGATGGCATTCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPSAMAC*MAFCTR
Trigger: CCTGGTGCAGAATGCCATTCAACAAGCCATAGCCGA...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGACAGGAGAAGACACCTaGGGTGGCTCAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLTGEDT*GGSNML
Trigger: GAGCATGTTTGAGCCACCTCAGGTGTCTTCTCCTGT...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATTGGTTCTGCTGTTCGTaGACAGAGGATTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHWFCCS*TEDWQV
Trigger: GACCTGCCAATCCTCTGTTCACGAACAGCAGAACCA...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR TCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGATGCCCCCACCATCTTaGACCAAGTTGTTCAACGCG +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGMPPPS*TKLFNA
Trigger: CGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCAT...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGATGCCCCCACCATCTTaGACCAAGTTGTTCAACGCG +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLMPPPS*TKLFNA
Trigger: CGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCAT...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGATCATGGTGACGGGCTaGTCCAAGTTTGCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEIMVTG*SKFASG
Trigger: GCCGGAGGCAAACTTGGATCAGCCCGTCACCATGAT...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGCCCACCAGAACCACTaGACCAGGCTCTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQAHQNH*TRLWGG
Trigger: TCCTCCCCAGAGCCTGGTGCAGTGGTTCTGGTGGGC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATGCTGTAACTGCTTCTaGAGCAGCAACTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPCCNCF*SSNCSC
Trigger: GCAGGAACAGTTGCTGCTGCAGAAGCAGTTACAGCA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGGCTCTGCTCCATCCCTaGTGGTTTTGGACACAGCTT +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGALLHP*WFWTQL
Trigger: AAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGC...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATGCTCTGCTCCATCCCTaGTGGTTTTGGACACAGCTT +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHALLHP*WFWTQL
Trigger: AAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGC...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGTCTTCCATGAGGGTCTaGATCAGATTCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLSSMRV*IRFLGR
Trigger: GCGGCCCAAGAATCTGATGCAGACCCTCATGGAAGA...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGGGGGCTGTGCAATGCTaGTGCCTCCTCTGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGGAVQC*CLLCSY
Trigger: ATAAGAACAGAGGAGGCAGCAGCATTGCACAGCCCC...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTCTGGGGAAAGAGAGCTaGCAGCAGGCTCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFLGKES*QQAPGG
Trigger: CCCTCCTGGAGCCTGCTGCCAGCTCTCTTTCCCCAG...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGCTGGGGAAAGAGAGCTaGCAGCAGGCTCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQLGKES*QQAPGG
Trigger: CCCTCCTGGAGCCTGCTGCCAGCTCTCTTTCCCCAG...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGATGGTCCATGGGATGTaGGGTAGAGGTGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLMVHGM*GRGDSR
Trigger: CCTGGAATCACCTCTACCCCACATCCCATGGACCAT...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATGGCTTCTTGTCCTCATaGAAGGCACGCAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHGFLSS*KARSSN
Trigger: GTTTGAGCTGCGTGCCTTCCATGAGGACAAGAAGCC...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCCATCCTCAAAGAGCTTaGAGGGCTTCTTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRHPQRA*RASCPH
Trigger: ATGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATG...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTGTGCAGAGCTGCGATaGGGGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSCAELR*GLLLLL
Trigger: CAGCAGCAGCAGCAGCCCCCATCGCAGCTCTGCACA...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTGTGCAGAGCTGCGATaGGGGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQCAELR*GLLLLL
Trigger: CAGCAGCAGCAGCAGCCCCCATCGCAGCTCTGCACA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGGCTTCCTGCTGCCGATaGGGTCTCCAGGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLASCCR*GLQGTG
Trigger: CCCGGTGCCCTGGAGACCCCATCGGCAGCAGGAAGC...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGGAGGCTGTGTTGCCCTaGCTTCCTGCTGCCGATGGG +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWEAVLP*LPAADG
Trigger: CCCATCGGCAGCAGGAAGCCAGGGCAACACAGCCTC...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCGAGTCAAGCTCCTCTTaGGTCAAGGAGACATTGACA +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRESSSS*VKETLT
Trigger: TGTCAATGTCTCCTTGACCCAAGAGGAGCTTGACTC...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCACTATGGCTTGTTGAATaGCATTCTGCACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPLWLVE*HSAPGG
Trigger: GCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAG...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGCTTCTTCCTCCTGGTTaGCATAGATCCCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLLLPPG*HRSLLP
Trigger: GGGAAGCAGGGATCTATGCCAACCAGGAGGAAGAAG...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CAGCGCAAAGCCAGTGCGCTCTTTCTTCGATTAACCCGTGTGGCCTCGAGGACACTTCTTCCTCCTGGTTaGCATAGATCCCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QRKASALFLRLTRVASRTLLPPG*HRSLLP
Trigger: GGGAAGCAGGGATCTATGCCAACCAGGAGGAAGAAG...TGTCCTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR CCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGCTGCAAGTGACAGGTaGGAAACTGGTGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLAASDR*ETGAGK
Trigger: TTTCCCTGCACCAGTTTCCCACCTGTCACTTGCAGC...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATGCTGCAAGTGACAGGTaGGAAACTGGTGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHAASDR*ETGAGK
Trigger: TTTCCCTGCACCAGTTTCCCACCTGTCACTTGCAGC...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTACGCCCAGGGACGGCTaGGGATCCGCTCCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: SLTPSEMLKLKISPTTYITPRDG*GSAPGA
Trigger: CGCCCCTGGAGCGGATCCCCAGCCGTCCCTGGGCGT...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp CTTTCTTCGATTAACCCGTGTGGCCTCGAGGACACTACTATCATCCATTCTCTCTCTCTATTTTCCCTCTaGGCGCCCGCTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LSSINPCGLEDTTIIHSLSLFSL*APAPGG
Trigger: GCCCCCGGGAGCGGGCGCCCAGAGGGAAAATAGAGA...GAGAGAATGGATGATAGTAGTGTCCTCGAGGCCACACGGGTTAATCGAAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR TCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGGGGCCCCCTTTCCCTaGGCGCCCTGTCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIGAPFP*APCLQQ
Trigger: CTGCTGAAGACAGGGCGCTCAGGGAAAGGGGGCCCC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCGGGGCCCCCTTTCCCTaGGCGCCCTGTCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSGAPFP*APCLQQ
Trigger: CTGCTGAAGACAGGGCGCTCAGGGAAAGGGGGCCCC...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCCTCTCTCTACCTTCCTaGCTTTTCTTTCGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRLSLPS*LFFRVS
Trigger: GGAAACACGAAAGAAAAGTCAGGAAGGTAGAGAGAG...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGTTCCTTGGGATGGCTaGGGCTCCCATCTGCAATCA +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEVPWDG*GSHLQS
Trigger: TGATTGCAGATGGGAGCCTCAGCCATCCCAAGGAAC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGACAGTGAGGTCTACGTaGGTGGTGGAGAGTACAGGC +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKETVRST*VVESTG
Trigger: GCCTGTACTCTCCACCACTCACGTAGACCTCACTGT...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATTGCTGTAACTGCTTCTaGAGCAGCAACTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHCCNCF*SSNCSC
Trigger: GCAGGAACAGTTGCTGCTGCAGAAGCAGTTACAGCA...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTGCGATGGGGGCTGCTaGTGCTGCTGCTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSCDGGC*CCCCNC
Trigger: GCAGTTACAGCAGCAGCAGCAGCAGCCCCCATCGCA...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCGCCCTGGCTTCCTGCTaGCGATGGGGTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSALASC*RWGLQG
Trigger: GCCCTGGAGACCCCATCGGCAGCAGGAAGCCAGGGC...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGCCCTGGCTTCCTGCTaGCGATGGGGTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIALASC*RWGLQG
Trigger: GCCCTGGAGACCCCATCGGCAGCAGGAAGCCAGGGC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAATCGGGCCACTGGGCTaGACAGCTGGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKIGPLG*TAGSGW
Trigger: CCAGCCACTGCCAGCTGTGCAGCCCAGTGGCCCGAT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGTTTGTCCTGGGGCTCTaGGTACTCTGCAAGACTTGT +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGFVLGL*VLCKTC
Trigger: ACAAGTCTTGCAGAGTACGCAGAGCCCCAGGACAAA...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGGGGCTAAGTCAGGCTaGAAGCTGGGGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQGAKSG*KLGPSV
Trigger: CACTGAAGGCCCCAGCTTGCAGCCTGACTTAGCCCC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CGCAAAGCCAGTGCGCTCTTTCTTCGATTAACCCGTGTGGCCTCGAGGACACTATCTTCCATGAGGGTCTaGATCAGATTCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: RKASALFLRLTRVASRTLSSMRV*IRFLGR
Trigger: GCGGCCCAAGAATCTGATGCAGACCCTCATGGAAGA...TAGTGTCCTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGCTTTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAGTGCAATTCCGCCTCTaGCATCCTGGAGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKVQFRL*HPGEGH
Trigger: GTGCCCTTCTCCAGGATGGCAGAGGCGGAATTGCAC...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000483909.5
CDS-3UTR GCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACCAGCGGGTATGCCCTaGAGCAGCCATTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRPAGMP*SSHFSR
Trigger: TCGGGAGAAATGGCTGCTGCAGGGCATACCCGCTGG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATCATCCTCTTCAGACTaGCGCCTCCTGGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKSSSSD*RLLASS
Trigger: GGAGGAAGCCAGGAGGCGGCAGTCTGAAGAGGATGA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAGGTCTCAGTTCCGCCTaGAGCAACTATGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPGLSSA*SNYVDL
Trigger: CAAATCAACATAGTTGCTGCAGGCGGAACTGAGACC...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTCTGTGCCATGTAGGCTaGACCAGCCTGGGCCCTACT +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFLCHVG*TSLGPT
Trigger: AGTAGGGCCCAGGCTGGTGCAGCCTACATGGCACAG...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGCTGTGCCATGTAGGCTaGACCAGCCTGGGCCCTACT +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWLCHVG*TSLGPT
Trigger: AGTAGGGCCCAGGCTGGTGCAGCCTACATGGCACAG...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGACCTGTACACCCAAGTaGCACGGTCACTCTGGAATT +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLTCTPK*HGHSGI
Trigger: AATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGT...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGCAGTCCTGGGGTTCTaGTCCAGTCCAGCGCCGCGC +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIAVLGF*SSPAPR
Trigger: GCGCGGCGCTGGACTGGAGCAGAACCCCAGGACTGC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000434623.6
CDS-3UTR CCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTCTGGGGAAAGAGAGCTaGCAGCAGGCTCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSLGKES*QQAPGG
Trigger: CCCTCCTGGAGCCTGCTGCCAGCTCTCTTTCCCCAG...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCACAGAATCACAGCAGTTaGCCTCTAGCACCTCATCTA +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPQNHSS*PLAPHL
Trigger: TAGATGAGGTGCTAGAGGCCAACTGCTGTGATTCTG...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGCACGCAGCTCAAACTTaGCCTCCTTTTTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGHAAQT*PPFSVW
Trigger: CCACACTGAAAAAGGAGGCCAAGTTTGAGCTGCGTG...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGTGTGCAGAGCTGCGATaGGGGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRCAELR*GLLLLL
Trigger: CAGCAGCAGCAGCAGCCCCCATCGCAGCTCTGCACA...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGGCACCACTGTCTTCTaGAGGTCCCCCGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSGTTVF*RSPDRR
Trigger: CCTTCTGTCGGGGGACCTCCAGAAGACAGTGGTGCC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCGCTTCCTGCTGCCGATaGGGTCTCCAGGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSASCCR*GLQGTG
Trigger: CCCGGTGCCCTGGAGACCCCATCGGCAGCAGGAAGC...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGCTATGGCTTGTTGAATaGCATTCTGCACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLLWLVE*HSAPGG
Trigger: GCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAG...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCTTCAGTGGTGGGGGATaGAGGAGGTTTGACTTTCTC +
Preference number: 4 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPFSGGG*RRFDFL
Trigger: GAGAAAGTCAAACCTCCTCCATCCCCCACCACTGAA...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGTTCAGTGGTGGGGGATaGAGGAGGTTTGACTTTCTC +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGFSGGG*RRFDFL
Trigger: GAGAAAGTCAAACCTCCTCCATCCCCCACCACTGAA...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTAGCTGGGGCCTTCAGTaGTGGGGGATGGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSSWGLQ*WGMEEV
Trigger: AACCTCCTCCATCCCCCACCACTGAAGGCCCCAGCT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000495980.1
CDS-3UTR CCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCTACTGCTCTCTAAGTaGCCCTACCACCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHLLLSK*PYHHCP
Trigger: AGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAG...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATGCAGCGCTGGGGGCTTaGGCCTGCTGCCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDAALGA*ACCPGF
Trigger: GAACCCAGGGCAGCAGGCCCAAGCCCCCAGCGCTGC...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAGGTCTACGTGAGTGGTaGAGAGTACAGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKGLREW*RVQAAQ
Trigger: CTGGGCAGCCTGTACTCTCCACCACTCACGTAGACC...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCTTTGTTGCCCAGGCTaGAGTGCACATCTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKELCCPG*SAHLGS
Trigger: TGAGCCGAGATGTGCACTCCAGCCTGGGCAACAAAG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATACCGGGGGCGCAGTCCTaGGGTTCTGCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIPGAQS*GSAPVQ
Trigger: CTGGACTGGAGCAGAACCCCAGGACTGCGCCCCCGG...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTATGCTTGCGCGTTCATaGGAAGAGGCAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSMLARS*EEAGAV
Trigger: CACAGCCCCTGCCTCTTCTCATGAACGCGCAAGCAT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGATGCTTGCGCGTTCATaGGAAGAGGCAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQMLARS*EEAGAV
Trigger: CACAGCCCCTGCCTCTTCTCATGAACGCGCAAGCAT...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGATGCTTGCGCGTTCATaGGAAGAGGCAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWMLARS*EEAGAV
Trigger: CACAGCCCCTGCCTCTTCTCATGAACGCGCAAGCAT...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTATGCTTGCGCGTTCATaGGAAGAGGCAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFMLARS*EEAGAV
Trigger: CACAGCCCCTGCCTCTTCTCATGAACGCGCAAGCAT...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGTGGCTTGTCTGAGTTaGCTGACCCCAGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSVACLS*LTPEAC
Trigger: ACAGGCCTCTGGGGTCAGTCAACTCAGACAAGCCAC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGACCATGATCACTAAATaGCTTGGAGACGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLTMITK*LGDAFS
Trigger: GGAGAAGGCGTCTCCAAGTCATTTAGTGATCATGGT...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGGGCCCCCTTTCCCTaGGCGCCCTGTCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRGAPFP*APCLQQ
Trigger: CTGCTGAAGACAGGGCGCTCAGGGAAAGGGGGCCCC...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGGGGATGGAGGAGGTTTaGCTTTCTCTATTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGGMEEV*LSLFSL
Trigger: CAGGGAAAATAGAGAAAGTCAAACCTCCTCCATCCC...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATCTCATAGTCTTCCATaGGGGTCTGCATCAGATTCT +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPSHSLP*GSASDS
Trigger: AGAATCTGATGCAGACCCTCATGGAAGACTATGAGA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCACTCTCTCTACCTTCCTaGCTTTTCTTTCGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPLSLPS*LFFRVS
Trigger: GGAAACACGAAAGAAAAGTCAGGAAGGTAGAGAGAG...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATACTACGGTGCCTCCTaGGCGCACCTCATACACTAC +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKYYGAS*AHLIHY
Trigger: GTAGTGTATGAGGTGCGCTCAGGAGGCACCGTAGTA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAGTTCCTTGGGATGGCTaGGGCTCCCATCTGCAATCA +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKVPWDG*GSHLQS
Trigger: TGATTGCAGATGGGAGCCTCAGCCATCCCAAGGAAC...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAGGGATTCCACCATTTTaGTGCAATGCCAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPGIPPF*CNARIL
Trigger: AAGAATCCTGGCATTGCAGCAAAATGGTGGAATCCC...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGGGCTGTGCAGAGCTaGGATGGGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRGAVQS*DGGCCC
Trigger: GCAGCAGCAGCCCCCATCGCAGCTCTGCACAGCCCC...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGTGCAGCCTTTCCTTGTaGAATTCCGCCTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKECSLSL*NSASAI
Trigger: GATGGCAGAGGCGGAATTGCACAAGGAAAGGCTGCA...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCAAGCTGTTGTCGCTTaGCTTCTATTTCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHQAVVA*LLFQSA
Trigger: GGCAGACTGAAATAGAAGGCAAGCGACAACAGCTTG...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGTTGGACTTGGAATGCTaGAGCAGAAGTATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLLDLEC*SRSICS
Trigger: CGAGCAGATACTTCTGCTGCAGCATTCCAAGTCCAA...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACAGTTCCAGCGGGTATaGCCTGCAGCAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKQFQRV*PAAAIS
Trigger: AGAAATGGCTGCTGCAGGGCATACCCGCTGGAACTG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGCTGGGGAAAGAGAGCTaGCAGCAGGCTCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLLGKES*QQAPGG
Trigger: CCCTCCTGGAGCCTGCTGCCAGCTCTCTTTCCCCAG...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGGATAGCGGATCTCTCTaGCAACATCATTATCCAGGG +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGDSGSL*QHHYPG
Trigger: CCCTGGATAATGATGTTGCCAGAGAGATCCGCTATC...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTCTTTCAGTGGGTTCTaGCTGGGTCGCCTCGTGGAC +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQSFSGF*LGRLVD
Trigger: GTCCACGAGGCGACCCAGCCAGAACCCACTGAAAGA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGCATCCTCAAAGAGCTTaGAGGGCTTCTTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGHPQRA*RASCPH
Trigger: ATGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATG...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATGTGCAGAGCTGCGATaGGGGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKCAELR*GLLLLL
Trigger: CAGCAGCAGCAGCAGCCCCCATCGCAGCTCTGCACA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAAGCCTGGGTGTACTCTaGCCCTTGGCCACCGCTTGC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKSLGVL*PLATAC
Trigger: GCAAGCGGTGGCCAAGGGCCAGAGTACACCCAGGCT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGGGTCTCCAGGACTGTaGTATCCTGAGACCTCACCG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQGSPGL*YPETSP
Trigger: CGGTGAGGTCTCAGGATACCACAGTCCTGGAGACCC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATGCCAGTGAATTTTCCTaGAGGGCATTGGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHASEFS*RALVVS
Trigger: TGAGACAACCAATGCCCTCCAGGAAAATTCACTGGC...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCTGCTCCATCCCTGCTaGTTTTGGACACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHLLHPC*FWTQLY
Trigger: ATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAG...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATCTCTTCCTCAATCATaGACAAAGTCCGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPSLPQS*TKSAVS
Trigger: GGAAACAGCGGACTTTGTCCATGATTGAGGAAGAGA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGTTTTGTAGCATGTTCTaGAGGGCAGTGATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLFCSMF*RAVMGH
Trigger: ATGCCCCATCACTGCCCTCCAGAACATGCTACAAAA...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTAGATTCTTGGGCCGCTaGGTTCCGGCAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSRFLGR*VPAASS
Trigger: TGAAGAGGCTGCCGGAACCCAGCGGCCCAAGAATCT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000495980.1
CDS-3UTR CCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGTCTGCATCAGATTCTTaGGCCGCTGGGTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWSASDS*AAGFRQ
Trigger: CTGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGA...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CCGTGTGGCCTCGAGGACACTACTATCATCCATTCTCTCGCGCCTTTTAGATTTTCTGCATCAGATTCTTaGGCCGCTGGGTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PCGLEDTTIIHSLAPFRFSASDS*AAGFRQ
Trigger: CTGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGA...AAATCTAAAAGGCGCGAGAGAATGGATGATAGTAGTGTCCTCGAGGCCACACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR CCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATCGCCCAGAGAGGCTaGTCTCAGTTCCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRIAQRG*SQFRLQ
Trigger: CTGCAGGCGGAACTGAGACCAGCCTCTCTGGGCGAT...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCTGATGGACCCCCTCTaGGCCAATGGTAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKELMDPL*ANGRCR
Trigger: TCTACATCTACCATTGGCCCAGAGGGGGTCCATCAG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGATGTGTTCCTTGGGATaGCTGAGGCTCCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEMCSLG*LRLPSA
Trigger: TGCAGATGGGAGCCTCAGCCATCCCAAGGAACACAT...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTCATCCTCAGAAAGCTaGGGAGGCTTCTCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFSSSES*GGFSGR
Trigger: GCGCCCAGAGAAGCCTCCCCAGCTTTCTGAGGATGA...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000434623.6
CDS-3UTR CCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGAACTGCCACTGTGCCTaGGGCTGTGCAATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWNCHCA*GCAMLL
Trigger: CAGCAGCATTGCACAGCCCCAGGCACAGTGGCAGTT...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGTCCACACACGGAGCATaGCCCAAGAACCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRSTHGA*PKNPQL
Trigger: GAGCTGGGGGTTCTTGGGCCATGCTCCGTGTGTGGA...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR CAA 72 bp AGAAGTAAATCCCAACCTATGCCCACTTTAGCCCCTTaGGGCCACACCTGCAAGGTTCTGCCTCAATGCTCC +
Preference number: 4 (lower is better)
Translates to: RSKSQPMPTLAP*GHTCKVLPQCS
Trigger: GGAGCATTGAGGCAGAACCTTGCAGGTGTGGCCCAAAGGGGCTAAAGTGGGCATAGGTTGGGATTTACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGCCATTATGCGGGGGTaGATAGAAAGCGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSAIMRG*IESGGM
Trigger: CATCCCTCCGCTTTCTATTCACCCCCGCATAATGGC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATATTGTGGAGCTGGGGCTaGCAGGCACCTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILILWSWG*QAPAGC
Trigger: ACAGCCTGCAGGTGCCTGTCAGCCCCAGCTCCACAA...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGCCTGTAGAAAGGCTTaGTGGAGAACAGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQACRKA*WRTAWV
Trigger: CACCCAGGCTGTTCTCCATCAAGCCTTTCTACAGGC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATACTGTCCCTTGGCGGCTaGGGCACCACTGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILILSLGG*GTTVFW
Trigger: CCAGAAGACAGTGGTGCCTCAGCCGCCAAGGGACAG...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCTGTCCCTTGGCGGCTaGGGCACCACTGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSLSLGG*GTTVFW
Trigger: CCAGAAGACAGTGGTGCCTCAGCCGCCAAGGGACAG...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGAAGTCCTTTCTCTTTTaGTTCCTGGGTGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLKSFLF*FLGVQS
Trigger: ACTCTGGACACCCAGGAATCAAAAGAGAAAGGACTT...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGCTCTCTCTACCTTCCTaGCTTTTCTTTCGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGLSLPS*LFFRVS
Trigger: GGAAACACGAAAGAAAAGTCAGGAAGGTAGAGAGAG...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGATACTACGGTGCCTCCTaGGCGCACCTCATACACTAC +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRYYGAS*AHLIHY
Trigger: GTAGTGTATGAGGTGCGCTCAGGAGGCACCGTAGTA...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACAGTTAGTGGTACAGTaGGGTCTACGTGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKQLVVQ*GLREWW
Trigger: CCACCACTCACGTAGACCTCACTGTACCACTAACTG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTACTCCCGACCTCAGGTaGACCACCCGCCGCGGACTT +
Preference number: 4 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSTPDLR*TTRRGL
Trigger: AAGTCCGCGGCGGGTGGTTCACCTGAGGTCGGGAGT...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATACTCCCGACCTCAGGTaGACCACCCGCCGCGGACTT +
Preference number: 4 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDTPDLR*TTRRGL
Trigger: AAGTCCGCGGCGGGTGGTTCACCTGAGGTCGGGAGT...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACAGTGGGAAGGACTGTaGGGAGACGACTACAAGAGG +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRQWEGL*GDDYKR
Trigger: CCTCTTGTAGTCGTCTCCTCACAGTCCTTCCCACTG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACAGTGCAAGGCCAAGTaGCAGGCCCTTTGTTCATGC +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRQCKAK*QALCSC
Trigger: GCATGAACAAAGGGCCTGTCACTTGGCCTTGCACTG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATCTCTACCAGATCCATaGGTCAGAGAAAACATGAAG +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPSLPDP*VRENMK
Trigger: CTTCATGTTTTCTCTGACTCATGGATCTGGTAGAGA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTGGATTAGGCAGGAATaGCTTTCCTCCAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQWIRQE*LSSRGR
Trigger: CCGTCCCCTGGAGGAAAGTCATTCCTGCCTAATCCA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGAAGAGGCAGGGGCTGTaGAGAGCTGCGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGKRQGL*RAAMGA
Trigger: AGCCCCCATCGCAGCTCTGCACAGCCCCTGCCTCTT...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGTTTGTCAATCATGCTTaGGCGTTCATGAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGFVNHA*AFMRRG
Trigger: GCCTCTTCTCATGAACGCGCAAGCATGATTGACAAA...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGTTTGTCAATCATGCTTaGGCGTTCATGAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLFVNHA*AFMRRG
Trigger: GCCTCTTCTCATGAACGCGCAAGCATGATTGACAAA...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGGCAGAGAAATCTATCTaGTCTGTGACAATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGAEKSI*SVTMSS
Trigger: GGAGGACATTGTCACAGAGCAGATAGATTTCTCTGC...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTCCCTTGGCCACCGCTTaGCTGGAATTCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSPLATA*LEFSIS
Trigger: GCTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGG...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGCCCTGGCTTCCTGCTaGCGATGGGGTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAALASC*RWGLQG
Trigger: GCCCTGGAGACCCCATCGGCAGCAGGAAGCCAGGGC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGTTGCCCTGGCTTCCTaGTGCCGATGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIVALAS*CRWGLQ
Trigger: CTGGAGACCCCATCGGCAGCAGGAAGCCAGGGCAAC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGGGGCTAAGTCAGGCTaGAAGCTGGGGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKGAKSG*KLGPSV
Trigger: CACTGAAGGCCCCAGCTTGCAGCCTGACTTAGCCCC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGTTGGCATAGATCCCTaGTTCCCAGCGCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSVGIDP*FPAQSQ
Trigger: CTGGCTTTGCGCTGGGAAGCAGGGATCTATGCCAAC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000495980.1
CDS-3UTR GCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGCAGCCTGGGCCCTACTaGTCTCTAAGTGGCCCTACC +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLQPGPY*SLSGPT
Trigger: GGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTG...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAACTGTGCCATGTAGGCTaGACCAGCCTGGGCCCTACT +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKLCHVG*TSLGPT
Trigger: AGTAGGGCCCAGGCTGGTGCAGCCTACATGGCACAG...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTACACAGCAGCCGCTCTaGTGGTCCCGTCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSTQQPL*WSRPAQ
Trigger: CTGGGCAGGACGGGACCAGCAGAGCGGCTGCTGTGT...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGTCCTTTCAGACACGTaGCCTCCTCCTAAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEVLSDT*PPPKLD
Trigger: ATCAAGCTTAGGAGGAGGGCACGTGTCTGAAAGGAC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGACTGGATGTCTCCCTaGCCACTTAATCTCGAAACC +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEDWMSP*PLNLET
Trigger: GGTTTCGAGATTAAGTGGGCAGGGAGACATCCAGTC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCTCAGTGGGTTCTGGCTaGGTCGCCTCGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSSVGSG*VASWTG
Trigger: CCCTGTCCACGAGGCGACCCAGCCAGAACCCACTGA...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTTCTTTCAGTGGGTTCTaGCTGGGTCGCCTCGTGGAC +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSSFSGF*LGRLVD
Trigger: GTCCACGAGGCGACCCAGCCAGAACCCACTGAAAGA...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTAGCGCATCTCTAGGCTaGCTGGGGGAATGGCCATTT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSSASLG*LGEWPF
Trigger: AAATGGCCATTCCCCCAGCCAGCCTAGAGATGCGCT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGTGTGCAGAGCTGCGATaGGGGCTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGCAELR*GLLLLL
Trigger: CAGCAGCAGCAGCAGCCCCCATCGCAGCTCTGCACA...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCAGCCTGGGTGTACTCTaGCCCTTGGCCACCGCTTGC +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSSLGVL*PLATAC
Trigger: GCAAGCGGTGGCCAAGGGCCAGAGTACACCCAGGCT...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTCCCCCGACAGAAGGTaGTCTCGGATTAGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQSPDRR*SRISQW
Trigger: CCACTGACTAATCCGAGACCACCTTCTGTCGGGGGA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGGCACCACTGTCTTCTaGAGGTCCCCCGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKGTTVF*RSPDRR
Trigger: CCTTCTGTCGGGGGACCTCCAGAAGACAGTGGTGCC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGGAGGCTGTGTTGCCCTaGCTTCCTGCTGCCGATGGG +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGEAVLP*LPAADG
Trigger: CCCATCGGCAGCAGGAAGCCAGGGCAACACAGCCTC...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGTCTCTTCCTCAATCATaGACAAAGTCCGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLSLPQS*TKSAVS
Trigger: GGAAACAGCGGACTTTGTCCATGATTGAGGAAGAGA...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGGGCATTCTTTGTCCTaGGGCTCTGCGTACTCTGCA +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQGHSLS*GSAYSA
Trigger: TGCAGAGTACGCAGAGCCCCAGGACAAAGAATGCCC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGGGGCATTCTTTGTCCTaGGGCTCTGCGTACTCTGCA +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWGHSLS*GSAYSA
Trigger: TGCAGAGTACGCAGAGCCCCAGGACAAAGAATGCCC...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGTCTGCATCAGATTCTTaGGCCGCTGGGTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRSASDS*AAGFRQ
Trigger: CTGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGA...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGCATCTCCATCCGTACTaGAGAAACCCTTCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGHLHPY*RNPSES
Trigger: ACTTTCAGAAGGGTTTCTCCAGTACGGATGGAGATG...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAGTGCCACGGTCACTCTaGAATTTTAATACACACACA +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPVPRSL*NFNTHT
Trigger: TGTGTGTGTATTAAAATTCCAGAGTGACCGTGGCAC...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACTGATGGACCCCCTCTaGGCCAATGGTAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKLMDPL*ANGRCR
Trigger: TCTACATCTACCATTGGCCCAGAGGGGGTCCATCAG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAATGTGTTCCTTGGGATaGCTGAGGCTCCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKMCSLG*LRLPSA
Trigger: TGCAGATGGGAGCCTCAGCCATCCCAAGGAACACAT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGGATCAGGCATTGCCTaGTGGCCTCTGTGTATATCA +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEGSGIA*WPLCIS
Trigger: TGATATACACAGAGGCCACCAGGCAATGCCTGATCC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAACGCCCCCTTATCGCTaGGTTCTCAGCCCAGGCATC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKTPPYR*VLSPGI
Trigger: GATGCCTGGGCTGAGAACCCAGCGATAAGGGGGCGT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGAACTGCCACTGTGCCTaGGGCTGTGCAATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRNCHCA*GCAMLL
Trigger: CAGCAGCATTGCACAGCCCCAGGCACAGTGGCAGTT...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAATTCCGCGAATAGTGTaGCCTCTTAAGCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPIPRIV*PLKLFS
Trigger: AGAGAAAAGCTTAAGAGGCCACACTATTCGCGGAAT...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCGTAGTTAATCAGCTCTaGAGGAAAGTGAACACCTAT +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRVVNQL*RKVNTY
Trigger: ATAGGTGTTCACTTTCCTCCAGAGCTGATTAACTAC...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATGACATTGACAGATCTTaGGAACTGATCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHDIDRS*ELIQNP
Trigger: GGGATTTTGGATCAGTTCTCAAGATCTGTCAATGTC...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTAGGACTGTGGTATCCTaGGACCTCACCGACAATTCG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSRTVVS*DLTDNS
Trigger: CGAATTGTCGGTGAGGTCTCAGGATACCACAGTCCT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGAGGACTGTGGTATCCTaGGACCTCACCGACAATTCG +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWRTVVS*DLTDNS
Trigger: CGAATTGTCGGTGAGGTCTCAGGATACCACAGTCCT...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATTCTCCTCGGCCCTCTaGGGGGTTGTCAGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKFSSAL*GVVSLW
Trigger: CCACAAACTGACAACCCCTCAGAGGGCCGAGGAGAA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGCTCTGAGGCTTTTCTaGGCCGAAAGCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKALRLF*AESRSF
Trigger: GAAGCTGCGGCTTTCGGCTCAGAAAAGCCTCAGAGC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTTCCTCTTCCCTTTCCTaGGCTGCTCGGATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSSSSLS*AARISS
Trigger: GGAAGAGATCCGAGCAGCTCAGGAAAGGGAAGAGGA...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGCTGGAGAAACCCTTCTaGAAGTCCTTGAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLLEKPF*KSLKDF
Trigger: AAAATCCTTCAAGGACTTTCAGAAGGGTTTCTCCAG...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR TCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATTTAGGATTTGTAGCTaGTTCCAAGCCTGCACTTAT +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPFRICS*FQACTY
Trigger: ATAAGTGCAGGCTTGGAATCAGCTACAAATCCTAAA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAGACATGGCAGTGTGTaGCTACGTTACAGGAACACA +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKERHGSV*LRYRNT
Trigger: TGTGTTCCTGTAACGTAGTCACACACTGCCATGTCT...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCCTACATTTCAGCTGTaGCAAGCTCTGGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEPTFQL*QALGSS
Trigger: AGAAGAACCCAGAGCTTGTCACAGCTGAAATGTAGG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTTCTCACTCCACTCCTaGAGCCAGCAAACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFFSLHS*SQQTAL
Trigger: CAGAGCTGTTTGCTGGCTTCAGGAGTGGAGTGAGAA...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGCCATTTGTTCTTTCTaGCTCTGCCATGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQAICSF*LCHGVR
Trigger: CCTGACCCCATGGCAGAGGCAGAAAGAACAAATGGC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGATGGGGGCTGCTGCTaGTGCTGCTGTAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKDGGCC*CCCNCF
Trigger: GAAGCAGTTACAGCAGCAGCAGCAGCAGCCCCCATC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCTTGCTTTGTCAATCATaGTTGCGCGTTCATGAGAAG +
Preference number: 4 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPLLCQS*LRVHEK
Trigger: CTTCTCATGAACGCGCAAGCATGATTGACAAAGCAA...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGTTGCTTTGTCAATCATaGTTGCGCGTTCATGAGAAG +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLLLCQS*LRVHEK
Trigger: CTTCTCATGAACGCGCAAGCATGATTGACAAAGCAA...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATGACAATGTCCTCCTTTaGTTTGTCAATCATGCTTGC +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHDNVLL*FVNHAC
Trigger: GCAAGCATGATTGACAAAGCAAAGGAGGACATTGTC...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTAGGTCCCTGTTGCTCTaGTCCATCCCTGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSRSLLL*SIPAGF
Trigger: AAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGGGGCTCTGCGTACTCTaGAAGACTTGTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRGLCVL*KTCLCL
Trigger: GAGGCAGAGACAAGTCTTGCAGAGTACGCAGAGCCC...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTCTTCCATGAGGGTCTaGATCAGATTCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQSSMRV*IRFLGR
Trigger: GCGGCCCAAGAATCTGATGCAGACCCTCATGGAAGA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGTTGGACTTGGAATGCTaGAGCAGAAGTATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKELDLEC*SRSICS
Trigger: CGAGCAGATACTTCTGCTGCAGCATTCCAAGTCCAA...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATTCTCTAGGATGATTTaGTCTTTGGCAGATATCTGG +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPFSRMI*SLADIW
Trigger: CCAGATATCTGCCAAAGAGCAAATCATCCTAGAGAA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACATTTTCTACTACGGTaGCTCCTGAGCGCACCTCAT +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKHFLLR*LLSAPH
Trigger: ATGAGGTGCGCTCAGGAGGCACCGTAGTAGAAAATG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAGCTGAGGCTCCCATCTaGAATCACAGTCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKAEAPI*NHSPFR
Trigger: TCTGAAAGGACTGTGATTGCAGATGGGAGCCTCAGC...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACGCGGACTTCCAAAGTaGCGAGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRRGLPK*RDYRCE
Trigger: CTCACACCTGTAATCTCGGCACTTTGGAAGTCCGCG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGAGACTACAAGAGGTCATaGGCTCCATGTGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRDYKRS*APCGLS
Trigger: AGACAGGCCACATGGAGCGCATGACCTCTTGTAGTC...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGCCTGGGGCTGTGCAATaGTGCTGCCTCCTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLPGAVQ*CCLLCS
Trigger: AGAACAGAGGAGGCAGCAGCATTGCACAGCCCCAGG...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGCACTGCACCAGGCTCTaGGGAGGATGTTCCATTGTA +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWHCTRL*GGCSIV
Trigger: TACAATGGAACATCCTCCCCAGAGCCTGGTGCAGTG...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGGCTTCTTGTCCTCATaGAAGGCACGCAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSGFLSS*KARSSN
Trigger: GTTTGAGCTGCGTGCCTTCCATGAGGACAAGAAGCC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTGGCTTCTTGTCCTCATaGAAGGCACGCAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFGFLSS*KARSSN
Trigger: GTTTGAGCTGCGTGCCTTCCATGAGGACAAGAAGCC...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTGGCCACCGCTTGCCTaGAATTCTCCATCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSWPPLA*NSPSAE
Trigger: TTCAGCTGATGGAGAATTCCAGGCAAGCGGTGGCCA...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTGGCCACCGCTTGCCTaGAATTCTCCATCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQWPPLA*NSPSAE
Trigger: TTCAGCTGATGGAGAATTCCAGGCAAGCGGTGGCCA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGGGCACCACTGTCTTCTaGAGGTCCCCCGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGGTTVF*RSPDRR
Trigger: CCTTCTGTCGGGGGACCTCCAGAAGACAGTGGTGCC...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGGGATTTCTGTCCCTTaGCGGCTGAGGCACCACTGT +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKGISVP*RLRHHC
Trigger: ACAGTGGTGCCTCAGCCGCCAAGGGACAGAAATCCC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTGCTTCCTGCTGCCGATaGGGTCTCCAGGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVASCCR*GLQGTG
Trigger: CCCGGTGCCCTGGAGACCCCATCGGCAGCAGGAAGC...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTGGGCATTCTTTGTCCTaGGGCTCTGCGTACTCTGCA +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSGHSLS*GSAYSA
Trigger: TGCAGAGTACGCAGAGCCCCAGGACAAAGAATGCCC...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCAGCTGGGGCCTTCAGTaGTGGGGGATGGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSSWGLQ*WGMEEV
Trigger: AACCTCCTCCATCCCCCACCACTGAAGGCCCCAGCT...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAAGATTCTTGGGCCGCTaGGTTCCGGCAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKRFLGR*VPAASS
Trigger: TGAAGAGGCTGCCGGAACCCAGCGGCCCAAGAATCT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATCTGCATCAGATTCTTaGGCCGCTGGGTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKSASDS*AAGFRQ
Trigger: CTGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTCTTCTTCCTCCTGGTTaGCATAGATCCCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSLLPPG*HRSLLP
Trigger: GGGAAGCAGGGATCTATGCCAACCAGGAGGAAGAAG...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000495980.1
CDS-3UTR CCA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGACCAAAGACGCTTCCTaGGTTGAAGGAAGTTTATTC +
Preference number: 4 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGTKDAS*VEGSLF
Trigger: GAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGT...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCACCAAAGACGCTTCCTaGGTTGAAGGAAGTTTATTC +
Preference number: 4 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPTKDAS*VEGSLF
Trigger: GAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGT...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATCTCCCGAAGCACTTTaGACTTGGAATGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKSPEAL*TWNAAA
Trigger: TGCTGCAGCATTCCAAGTCCAAAGTGCTTCGGGAGA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCATCGCCCAGAGAGGCTaGTCTCAGTTCCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSIAQRG*SQFRLQ
Trigger: CTGCAGGCGGAACTGAGACCAGCCTCTCTGGGCGAT...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCGGTCTACGTGAGTGGTaGAGAGTACAGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIGLREW*RVQAAQ
Trigger: CTGGGCAGCCTGTACTCTCCACCACTCACGTAGACC...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGCATGCCCCCAAGGCTTaGCCTAGTGCTATAGGACTC +
Preference number: 4 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQHAPKA*PSAIGL
Trigger: GAGTCCTATAGCACTAGGCCAAGCCTTGGGGGCATG...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTCCAGGGATTCGTGGTaGTCAGTAAGGAGGCCATTA +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFSRDSW*SVRRPL
Trigger: TAATGGCCTCCTTACTGATCACCACGAATCCCTGGA...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCTTACTGAGCTCGATGTaGGGAGGTGCCTGCCGGCTA +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSLLSSM*GGACRL
Trigger: TAGCCGGCAGGCACCTCCTCACATCGAGCTCAGTAA...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGTGGCTTGTCTGAGTTaGCTGACCCCAGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIVACLS*LTPEAC
Trigger: ACAGGCCTCTGGGGTCAGTCAACTCAGACAAGCCAC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCTTCTCCTCGGCCCTCTaGGGGGTTGTCAGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSFSSAL*GVVSLW
Trigger: CCACAAACTGACAACCCCTCAGAGGGCCGAGGAGAA...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATCCTCTTCCCTTTCCTaGGCTGCTCGGATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKSSSLS*AARISS
Trigger: GGAAGAGATCCGAGCAGCTCAGGAAAGGGAAGAGGA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGTCTTGCTCCAGCCTCTaGATGTTATCTTCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKESCSSL*MLSSSC
Trigger: GCAACTTGAAGATAACATTCAGAGGCTGGAGCAAGA...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATTTTAGGATTTGTAGCTaGTTCCAAGCCTGCACTTAT +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHFRICS*FQACTY
Trigger: ATAAGTGCAGGCTTGGAATCAGCTACAAATCCTAAA...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCATCATCATAGACTTTaGCTCCTTTCTGATGGACCC +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEHHHRL*LLSDGP
Trigger: GGGTCCATCAGAAAGGAGTCAAAGTCTATGATGATG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGATTGTCCAGCCTTCTaGATAAGCTCTTCTACATCC +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEDCPAF*ISSSTS
Trigger: GGATGTAGAAGAGCTTATTCAGAAGGCTGGACAATC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGGACCAATTCAGCCTTaGTGGTTTCATCATAGCCTA +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEGPIQP*WFHHSL
Trigger: TAGGCTATGATGAAACCATCAAGGCTGAATTGGTCC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCACAGTGAGGTCTACGTaGGTGGTGGAGAGTACAGGC +
Preference number: 4 (lower is better)
Translates to: ATYRIVWIRHCLVASVYITVRST*VVESTG
Trigger: GCCTGTACTCTCCACCACTCACGTAGACCTCACTGT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAGAACACACTACAAAATaGAACCCCCAGTGCCAATGG +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKEHTTK*NPQCQW
Trigger: CCATTGGCACTGGGGGTTTCATTTTGTAGTGTGTTC...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGCTTTGGGGGAGTGCTaGGAAGGTATTTCAAAAACT +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEALGEC*EGISKT
Trigger: AGTTTTTGAAATACCTTCTCAGCACTCCCCCAAAGC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAAAGGCCTTTGTGAAGTaGACTGGTGGTAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKKAFVK*TGGSRN
Trigger: ATTCCTGCTACCACCAGTTCACTTCACAAAGGCCTT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACATCCTGAGGAAGGATaGTGCTTGGGAAGAGAGTCT +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRHPEEG*CLGRES
Trigger: AGACTCTCTTCCCAAGCATCATCCTTCCTCAGGATG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGATCACTCACCCCGAGTaGGATGCTAAAGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEITHPE*DAKAEN
Trigger: ATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGAT...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTGACGATCCTCCTTCCTaGGTCCTCCCATTTCACATC +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSDDPPS*VLPFHI
Trigger: GATGTGAAATGGGAGGACTCAGGAAGGAGGATCGTC...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTGTGAAAACAGCTTTGTaGCTGTGGGAGAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFVKTAL*LWESPR
Trigger: TCTGGGACTCTCCCACAGTCACAAAGCTGTTTTCAC...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAAGACAGATTCCTGCGTaGACCCTGGCTCAAGCTGGA +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKRQIPA*TLAQAG
Trigger: TCCAGCTTGAGCCAGGGTGCACGCAGGAATCTGTCT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000259318.7
CDS-3UTR GCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTGCCATTTGTTCTTTCTaGCTCTGCCATGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSAICSF*LCHGVR
Trigger: CCTGACCCCATGGCAGAGGCAGAAAGAACAAATGGC...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATATTCCACCATTTTGCTaGAATGCCAGGATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHIPPFC*NARILL
Trigger: AAGAAGAATCCTGGCATTGCAGCAAAATGGTGGAAT...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCATTCCACCATTTTGCTaGAATGCCAGGATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPIPPFC*NARILL
Trigger: AAGAAGAATCCTGGCATTGCAGCAAAATGGTGGAAT...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTGCTGTAACTGCTTCTaGAGCAGCAACTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQCCNCF*SSNCSC
Trigger: GCAGGAACAGTTGCTGCTGCAGAAGCAGTTACAGCA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGATGGGGGCTGCTGCTaGTGCTGCTGTAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIDGGCC*CCCNCF
Trigger: GAAGCAGTTACAGCAGCAGCAGCAGCAGCCCCCATC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAAGGGGCTGTGCAGAGCTaGGATGGGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQGAVQS*DGGCCC
Trigger: GCAGCAGCAGCCCCCATCGCAGCTCTGCACAGCCCC...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAAAGAGGCAGGGGCTGTaGAGAGCTGCGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAKRQGL*RAAMGA
Trigger: AGCCCCCATCGCAGCTCTGCACAGCCCCTGCCTCTT...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGGTTGTCTCATTGGATaGCCCGCTGTCACTGATGTT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSGCLIG*PAVTDV
Trigger: AACATCAGTGACAGCGGGGCATCCAATGAGACAACC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGGCTTCTCAGCTCAGCTaGCTCCGAGTACTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRASQLS*LRVLAE
Trigger: TTCAGCAAGTACTCGGAGGCAGCTGAGCTGAGAAGC...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGGGCTCTGCGTACTCTaGAAGACTTGTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKGLCVL*KTCLCL
Trigger: GAGGCAGAGACAAGTCTTGCAGAGTACGCAGAGCCC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTTTGTCCTGGGGCTCTaGGTACTCTGCAAGACTTGT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSFVLGL*VLCKTC
Trigger: ACAAGTCTTGCAGAGTACGCAGAGCCCCAGGACAAA...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTCCAGCGCAAAGCCAGTaGGCTCTTTCTTCGATTAAC +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSPAQSQ*ALSSIN
Trigger: GTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTGG...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000495980.1
CDS-3UTR GCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGCCAGCGCAAAGCCAGTaGGCTCTTTCTTCGATTAAC +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWPAQSQ*ALSSIN
Trigger: GTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTGG...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp CCGTGTGGCCTCGAGGACACTACTATCATCCATTCTCTCGCGCCTTTTAGATTTCCAGCGCAAAGCCAGTaGGCTCTTTCTTCGATTAAC +
Preference number: 4 (lower is better)
Translates to: PCGLEDTTIIHSLAPFRFPAQSQ*ALSSIN
Trigger: GTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTGG...AAATCTAAAAGGCGCGAGAGAATGGATGATAGTAGTGTCCTCGAGGCCACACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACAAGCTGTTGTCGCTTaGCTTCTATTTCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKQAVVA*LLFQSA
Trigger: GGCAGACTGAAATAGAAGGCAAGCGACAACAGCTTG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCCAGTTCCAGCGGGTATaGCCTGCAGCAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTQFQRV*PAAAIS
Trigger: AGAAATGGCTGCTGCAGGGCATACCCGCTGGAACTG...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATATCATCCTCTTCAGACTaGCGCCTCCTGGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILISSSSD*RLLASS
Trigger: GGAGGAAGCCAGGAGGCGGCAGTCTGAAGAGGATGA...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGCAGGGAAATATCCTGTaGCATGTAGGCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRQGNIL*HVGCTS
Trigger: GCTGGTGCAGCCTACATGGCACAGGATATTTCCCTG...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGAGTCCTTTCAGACACGTaGCCTCCTCCTAAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRVLSDT*PPPKLD
Trigger: ATCAAGCTTAGGAGGAGGGCACGTGTCTGAAAGGAC...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTGTTTGCCTCCGGCCCTaGAGCGCTGGGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVVCLRP*SAGGLG
Trigger: GCCCAAGCCCCCAGCGCTGCAGGGCCGGAGGCAAAC...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAGGCAAGGCAGGTGTTTaGTTCCAGTTCACAGTATTG +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKGKAGV*FQFTVL
Trigger: CAATACTGTGAACTGGAAGCAAACACCTGCCTTGCC...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTAGTTTCGCTCTTTGTTaGCCAGGCTGGAGTGCACAT +
Preference number: 4 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSSFALC*PGWSAH
Trigger: ATGTGCACTCCAGCCTGGGCAACAAAGAGCGAAACT...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGTCCAGCCATCCTAACTaGCACTGTGCCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGSSHPN*HCAWGC
Trigger: ACAGCCCCAGGCACAGTGGCAGTTAGGATGGCTGGA...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCTCTTTAAGCAATAAGTaGTCTGGTTCAATCAACTGT +
Preference number: 4 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRSLSNK*SGSINC
Trigger: ACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGA...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGTCTTTCAGTGGGTTCTaGCTGGGTCGCCTCGTGGAC +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGSFSGF*LGRLVD
Trigger: GTCCACGAGGCGACCCAGCCAGAACCCACTGAAAGA...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGTGTACTCTGGCCCTTaGCCACCGCTTGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIVYSGP*PPLAWN
Trigger: ATTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACAC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTTTCCTGGAGGGCATTaGTTGTCTCATTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQFPGGH*LSHWMP
Trigger: GGGCATCCAATGAGACAACCAATGCCCTCCAGGAAA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGAGAGTCCCCCAGCGTaGAGGAAGGGGAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKESPPA*RKGNRN
Trigger: GTTTCTATTCCCCTTCCTCCACGCTGGGGGACTCTC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTCCACCTGCTCGGCTATaGCTTGTTGAATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSPPARL*LVEWHS
Trigger: AGAATGCCATTCAACAAGCCATAGCCGAGCAGGTGG...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATTTCTCTATTTTCCCTaGAGCAGTTTTGTAGCATGT +
Preference number: 4 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPFLYFP*SSFVAC
Trigger: ACATGCTACAAAACTGCTCCAGGGAAAATAGAGAAA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTTCAGTGGTGGGGGATaGAGGAGGTTTGACTTTCTC +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQFSGGG*RRFDFL
Trigger: GAGAAAGTCAAACCTCCTCCATCCCCCACCACTGAA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTTATTCGTTGTCTTCAGTGGTGGGGGATaGAGGAGGTTTGACTTTCTC +
Preference number: 4 (lower is better)
Translates to: GLPSTKDASWVEGSLFVVFSGGG*RRFDFL
Trigger: GAGAAAGTCAAACCTCCTCCATCCCCCACCACTGAA...GACAACGAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR CCA 90 bp CAGCGCAAAGCCAGTGCGCTCTTTCTTCGATTAACCCGTGTGGCCTCGAGGACAAATTTCTTGGTTTCTTaGTCTCCCAAGCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: QRKASALFLRLTRVASRTNFLVS*SPKHQR
Trigger: TCTTTGGTGCTTGGGAGACCAAGAAACCAAGAAATT...TGTCCTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGGATCCATTGTAGATTaGCCCCAAACCAGACACTGG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSGSIVD*PQTRHW
Trigger: CCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAACCGCCTCTGCCATCCTaGAGAAGGGCACACAGGCAG +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWREPPLPS*RRAHRQ
Trigger: CTGCCTGTGTGCCCTTCTCCAGGATGGCAGAGGCGG...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp GAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTAATCCGCCTCTGCCATCCTaGAGAAGGGCACACAGGCAG +
Preference number: 4 (lower is better)
Translates to: ESSIFQPRPIWKHWISCNPPLPS*RRAHRQ
Trigger: CTGCCTGTGTGCCCTTCTCCAGGATGGCAGAGGCGG...ATTACATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGATCTCCCGAAGCACTTTaGACTTGGAATGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRSPEAL*TWNAAA
Trigger: TGCTGCAGCATTCCAAGTCCAAAGTGCTTCGGGAGA...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTACAGACTGCCGCCTCCTaGCTTCCTCCTCTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLQTAAS*LPPLRQ
Trigger: CTGCCGAAGAGGAGGAAGCCAGGAGGCGGCAGTCTG...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTCTTGATAGTCATGTCTaGGCCGGATGTTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFLDSHV*AGCFCG
Trigger: GCCACAGAAACATCCGGCCCAGACATGACTATCAAG...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGTCTTCTGGGCAAATATaGAGAGAAACGCCATTCATT +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLSSGQI*RETPFI
Trigger: AATGAATGGCGTTTCTCTCCATATTTGCCCAGAAGA...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGGGTTCCCGGAAGAATaGTCTTTCCTAGACTTATGT +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEGFPEE*SFLDLC
Trigger: ACATAAGTCTAGGAAAGACCATTCTTCCGGGAACCC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATTGGTTCAATCAACTGTaGTCAAAGACCACTTCATCT +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHWFNQL*SKTTSS
Trigger: AGATGAAGTGGTCTTTGACCACAGTTGATTGAACCA...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACAGCTCCATCCGTACTaGAGAAACCCTTCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKQLHPY*RNPSES
Trigger: ACTTTCAGAAGGGTTTCTCCAGTACGGATGGAGCTG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374531.6
ENST00000483909.5
3UTR CAA 72 bp GGACGGTCCCATCTTCAGAAAGTTAAAAGGGTCCATTaGGGATCCCAGAGCCTAGCACGGTGCTATGTACAA +
Preference number: 4 (lower is better)
Translates to: GRSHLQKVKRVH*GSQSLARCYVQ
Trigger: TTGTACATAGCACCGTGCTAGGCTCTGGGATCCCAAATGGACCCTTTTAACTTTCTGAAGATGGGACCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTCTCAAACCTCCTCAGTaGGAACTGCCTTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSLKPPQ*ELPFSR
Trigger: TCTGGAAAAAGGCAGTTCTCACTGAGGAGGTTTGAG...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259318.7
CDS-3UTR TCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGGCCATTATGCGGGGGTaGATAGAAAGCGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGAIMRG*IESGGM
Trigger: CATCCCTCCGCTTTCTATTCACCCCCGCATAATGGC...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGCTCCAGCATCTCCTCTaGAGGCCTCACTTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQLQHLL*RPHFSN
Trigger: ATTAGAAAAGTGAGGCCTTCAGAGGAGATGCTGGAG...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGACCATGATCACTAAATaGCTTGGAGACGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQTMITK*LGDAFS
Trigger: GGAGAAGGCGTCTCCAAGTCATTTAGTGATCATGGT...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAACAGGAGAAGACACCTaGGGTGGCTCAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKTGEDT*GGSNML
Trigger: GAGCATGTTTGAGCCACCTCAGGTGTCTTCTCCTGT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGGGGCCCCCTTTCCCTaGGCGCCCTGTCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEGAPFP*APCLQQ
Trigger: CTGCTGAAGACAGGGCGCTCAGGGAAAGGGGGCCCC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATATCCTGGACCTCAGCTTaGAAGGCCCAACCATCACGT +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILISWTSA*KAQPSR
Trigger: ACGTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGA...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGGGATGGAGGAGGTTTaGCTTTCTCTATTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSGMEEV*LSLFSL
Trigger: CAGGGAAAATAGAGAAAGTCAAACCTCCTCCATCCC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGGGATGGAGGAGGTTTaGCTTTCTCTATTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQGMEEV*LSLFSL
Trigger: CAGGGAAAATAGAGAAAGTCAAACCTCCTCCATCCC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGTGGTTCTGCTGTTCGTaGACAGAGGATTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLWFCCS*TEDWQV
Trigger: GACCTGCCAATCCTCTGTTCACGAACAGCAGAACCA...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR TCA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGCTGCAGCAACTATGTTaGTTTGCTTGTAACATGTTT +
Preference number: 4 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLLQQLC*FACNMF
Trigger: AAACATGTTACAAGCAAATCAACATAGTTGCTGCAG...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTGGGCTCTGTGGTGTCTaGGACCGGCCTCCCGGACAC +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVGLCGV*DRPPGH
Trigger: GTGTCCGGGAGGCCGGTCTCAGACACCACAGAGCCC...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTGGGCTCTGTGGTGTCTaGGACCGGCCTCCCGGACAC +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPGLCGV*DRPPGH
Trigger: GTGTCCGGGAGGCCGGTCTCAGACACCACAGAGCCC...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGATGACAACACAGCATTaGCAGCGCTTTTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEMTTQH*QRFFFW
Trigger: CCAAAAGAAAAAGCGCTGTCAATGCTGTGTTGTCAT...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAAAAGAAGTGGTCACATaGCAACACAGCATTGACAGC +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKKEVVT*QHSIDS
Trigger: GCTGTCAATGCTGTGTTGTCATGTGACCACTTCTTT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAAGTTCTTGGAGAGAATaGAGCACACACATGCACGTT +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKSSWRE*STHMHV
Trigger: AACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTCGAGCAGGAAGGAAGTaGTTCACTCTTGAAGACACA +
Preference number: 4 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSRAGRK*FTLEDT
Trigger: TGTGTCTTCAAGAGTGAATCACTTCCTTCCTGCTCG...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATACCATATCACTGGCTaGTACGAAGAGTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKYHITG*YEESIP
Trigger: TGGAATGGACTCTTCGTATCAGCCAGTGATATGGTA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACAACTGGGGAGGAGATaGACAGTTAATGCATTACAG +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKQLGRR*TVNALQ
Trigger: CTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTAGAAGAAGGCCTTTGTaGAGTGAACTGGTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSRRRPL*SELVVA
Trigger: TGCTACCACCAGTTCACTTCACAAAGGCCTTCTTCT...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGGCTGGAATGGAGTGGTaGGATCTCAGCCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMAGMEW*DLSPLQ
Trigger: CTGCAGGGGGCTGAGATCTCACCACTCCATTCCAGC...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACATTGGAGTTGTCTCCATaGCAGCAGTGTTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTLELSP*QQCSQL
Trigger: CAGCTGTGAACACTGCTGTCATGGAGACAACTCCAA...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGCATTGCAAAACTAAGTaGCTGGATGTCTCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQHCKTK*LDVSLP
Trigger: GGGCAGGGAGACATCCAGTCACTTAGTTTTGCAATG...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGGACGATCCTCCTTCCTaGGTCCTCCCATTTCACATC +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLDDPPS*VLPFHI
Trigger: GATGTGAAATGGGAGGACTCAGGAAGGAGGATCGTC...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGAGCTCTGGAGGAAAGTaGACACCTATAAACACGGCA +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQSSGGK*TPINTA
Trigger: TGCCGTGTTTATAGGTGTTCACTTTCCTCCAGAGCT...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGCTGGGGAGGCTTCCTaGCCAGAGCGCGCGCCTCAA +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEAGEAS*PERAPQ
Trigger: TTGAGGCGCGCGCTCTGGGCAGGAAGCCTCCCCAGC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259318.7
CDS-3UTR GCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTGCCCACCAGAACCACTaGACCAGGCTCTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVAHQNH*TRLWGG
Trigger: TCCTCCCCAGAGCCTGGTGCAGTGGTTCTGGTGGGC...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCATGCGATGGGGGCTGCTaGTGCTGCTGCTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNACDGGC*CCCCNC
Trigger: GCAGTTACAGCAGCAGCAGCAGCAGCCCCCATCGCA...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGGGGCTGTGCAGAGCTaGGATGGGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIGAVQS*DGGCCC
Trigger: GCAGCAGCAGCCCCCATCGCAGCTCTGCACAGCCCC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGCCCTTGGCCACCGCTTaGCTGGAATTCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRPLATA*LEFSIS
Trigger: GCTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGG...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGCCCTGGCTTCCTGCTaGCGATGGGGTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIALASC*RWGLQG
Trigger: GCCCTGGAGACCCCATCGGCAGCAGGAAGCCAGGGC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGCCCTGGCTTCCTGCTaGCGATGGGGTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEALASC*RWGLQG
Trigger: GCCCTGGAGACCCCATCGGCAGCAGGAAGCCAGGGC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATGTGCAATTCCGCCTCTaGCATCCTGGAGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDVQFRL*HPGEGH
Trigger: GTGCCCTTCTCCAGGATGGCAGAGGCGGAATTGCAC...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGTGCAGCCTTTCCTTGTaGAATTCCGCCTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRCSLSL*NSASAI
Trigger: GATGGCAGAGGCGGAATTGCACAAGGAAAGGCTGCA...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGTTTTCTGCTATGGCTTaGAGCCTTTCCTTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEFSAMA*SLSLCN
Trigger: ATTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAA...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACAAGCTGTTGTCGCTTaGCTTCTATTTCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRQAVVA*LLFQSA
Trigger: GGCAGACTGAAATAGAAGGCAAGCGACAACAGCTTG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAACTTTGGACTTGGAATaGTGCAGCAGAAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKTLDLE*CSRSIC
Trigger: GCAGATACTTCTGCTGCAGCATTCCAAGTCCAAAGT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTACCAGCGGGTATGCCCTaGAGCAGCCATTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLPAGMP*SSHFSR
Trigger: TCGGGAGAAATGGCTGCTGCAGGGCATACCCGCTGG...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCAGTTCCAGCGGGTATaGCCTGCAGCAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSQFQRV*PAAAIS
Trigger: AGAAATGGCTGCTGCAGGGCATACCCGCTGGAACTG...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATATGTTATCTTCAAGTTaGTTGACTCTGAACTCATCC +
Preference number: 4 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHMLSSS*LTLNSS
Trigger: GGATGAGTTCAGAGTCAAGCAACTTGAAGATAACAT...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTACTGCTGGTCCCGTCCTaGCCAGGTGATGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLLLVPS*PGDGSA
Trigger: AGCAGAACCATCACCTGGGCAGGACGGGACCAGCAG...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp TACAAAACCGCTCAAAACTTTGTAATTGTGACTCATGCAAATACCTTGTTAGGTCGACTCCAGCCGCTCTaGTGGTCCCGTCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: YKTAQNFVIVTHANTLLGRLQPL*WSRPAQ
Trigger: CTGGGCAGGACGGGACCAGCAGAGCGGCTGGAGTCG...ACCTAACAAGGTATTTGCATGAGTCACAATTACAAAGTTTTGAGCGGTTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR GCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGGTCTCAGTTCCGCCTaGAGCAACTATGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQGLSSA*SNYVDL
Trigger: CAAATCAACATAGTTGCTGCAGGCGGAACTGAGACC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCACAGCCTGGGCCCTACTaGTCTCTAAGTGGCCCTACC +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAQPGPY*SLSGPT
Trigger: GGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTG...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAACAGGGAAATATCCTGTaGCATGTAGGCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKQGNIL*HVGCTS
Trigger: GCTGGTGCAGCCTACATGGCACAGGATATTTCCCTG...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGCAGGTGGGAAACTGGTaGAGGGAAATATCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLQVGNW*REISCA
Trigger: GGCACAGGATATTTCCCTGCACCAGTTTCCCACCTG...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGGCTGAGGCTCCCATCTaGAATCACAGTCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQAEAPI*NHSPFR
Trigger: TCTGAAAGGACTGTGATTGCAGATGGGAGCCTCAGC...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTCTGGGGGCTTGGGCCTaGTGCCCTGGGTTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPLGAWA*CPGFPE
Trigger: TTCCGGGAACCCAGGGCAGCAGGCCCAAGCCCCCAG...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATCACATCTCGGCTCATTaGAACCCCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDHISAH*NPCLPG
Trigger: ACCTGGGAGGCAGGGGTTGCAATGAGCCGAGATGTG...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGCACTGCACCAGGCTCTaGGGAGGATGTTCCATTGTA +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLHCTRL*GGCSIV
Trigger: TACAATGGAACATCCTCCCCAGAGCCTGGTGCAGTG...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCAGCGCATCTCTAGGCTaGCTGGGGGAATGGCCATTT +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSSASLG*LGEWPF
Trigger: AAATGGCCATTCCCCCAGCCAGCCTAGAGATGCGCT...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATGGCCACCGCTTGCCTaGAATTCTCCATCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKWPPLA*NSPSAE
Trigger: TTCAGCTGATGGAGAATTCCAGGCAAGCGGTGGCCA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGTCCCCCGACAGAAGGTaGTCTCGGATTAGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGSPDRR*SRISQW
Trigger: CCACTGACTAATCCGAGACCACCTTCTGTCGGGGGA...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAGGCACCACTGTCTTCTaGAGGTCCCCCGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWREGTTVF*RSPDRR
Trigger: CCTTCTGTCGGGGGACCTCCAGAAGACAGTGGTGCC...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGGCACCACTGTCTTCTaGAGGTCCCCCGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAGTTVF*RSPDRR
Trigger: CCTTCTGTCGGGGGACCTCCAGAAGACAGTGGTGCC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGCTTCCTGCTGCCGATaGGGTCTCCAGGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIASCCR*GLQGTG
Trigger: CCCGGTGCCCTGGAGACCCCATCGGCAGCAGGAAGC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTGAGGCTGTGTTGCCCTaGCTTCCTGCTGCCGATGGG +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTEAVLP*LPAADG
Trigger: CCCATCGGCAGCAGGAAGCCAGGGCAACACAGCCTC...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTCTGCTCCATCCCTGCTaGTTTTGGACACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSLLHPC*FWTQLY
Trigger: ATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAG...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCGGGCATTCTTTGTCCTaGGGCTCTGCGTACTCTGCA +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSGHSLS*GSAYSA
Trigger: TGCAGAGTACGCAGAGCCCCAGGACAAAGAATGCCC...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCTTTCTCTATTTTCCCTaGAGCAGTTTTGTAGCATGT +
Preference number: 4 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPFLYFP*SSFVAC
Trigger: ACATGCTACAAAACTGCTCCAGGGAAAATAGAGAAA...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAACTTCTTCCTCCTGGTTaGCATAGATCCCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKLLPPG*HRSLLP
Trigger: GGGAAGCAGGGATCTATGCCAACCAGGAGGAAGAAG...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp AGCCAGTGCGCTCTTTCTTCGATTAACCCGTGTGGCCTCGAGGACACTACTATCACCAAAGACGCTTCCTaGGTTGAAGGAAGTTTATTC +
Preference number: 4 (lower is better)
Translates to: SQCALSSINPCGLEDTTITKDAS*VEGSLF
Trigger: GAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGT...GATAGTAGTGTCCTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAGAAGCACTTTGGACTTaGAATGCTGCAGCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKEALWT*NAAAEV
Trigger: TACTTCTGCTGCAGCATTCCAAGTCCAAAGTGCTTC...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTCAGACTGCCGCCTCCTaGCTTCCTCCTCTTCGGCAG +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVQTAAS*LPPLRQ
Trigger: CTGCCGAAGAGGAGGAAGCCAGGAGGCGGCAGTCTG...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGCTGCAAGTGACAGGTaGGAAACTGGTGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKAASDR*ETGAGK
Trigger: TTTCCCTGCACCAGTTTCCCACCTGTCACTTGCAGC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTCAGCAGCCGCTCTGCTaGTCCCGTCCTGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVQQPLC*SRPAQV
Trigger: CACCTGGGCAGGACGGGACCAGCAGAGCGGCTGCTG...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGGGTCTACGTGAGTGGTaGAGAGTACAGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMGLREW*RVQAAQ
Trigger: CTGGGCAGCCTGTACTCTCCACCACTCACGTAGACC...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGAAACCCCCAGTGCCAATaGGTTCAATTCCAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRNPQCQ*VQFQSS
Trigger: ACTTGACTGGAATTGAACCCATTGGCACTGGGGGTT...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACTGATGGGCAGGTTATaGAATCAGTCCCTACATTTC +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKLMGRL*NQSLHF
Trigger: GAAATGTAGGGACTGATTCCATAACCTGCCCATCAG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAACTTGCTGCTATAGGTaGGATTATAGGTCTCATCCC +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKTCCYR*DYRSHP
Trigger: GGGATGAGACCTATAATCCCACCTATAGCAGCAAGT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACCGGGGGCGCAGTCCTaGGGTTCTGCTCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIPGAQS*GSAPVQ
Trigger: CTGGACTGGAGCAGAACCCCAGGACTGCGCCCCCGG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000434623.6
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAATCCACACACGGAGCATaGCCCAAGAACCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWRESTHGA*PKNPQL
Trigger: GAGCTGGGGGTTCTTGGGCCATGCTCCGTGTGTGGA...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACAGCTCCATCCGTACTaGAGAAACCCTTCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRQLHPY*RNPSES
Trigger: ACTTTCAGAAGGGTTTCTCCAGTACGGATGGAGCTG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374531.6
CDS-3UTR TCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATATGTTCTGGAGGGCAGTaGTGGGGCATTCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILICSGGQ*WGILCP
Trigger: AGGACAAAGAATGCCCCATCACTGCCCTCCAGAACA...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTCTCATAGTCTTCCATaGGGGTCTGCATCAGATTCT +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQSHSLP*GSASDS
Trigger: AGAATCTGATGCAGACCCTCATGGAAGACTATGAGA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTCTCATAGTCTTCCATaGGGGTCTGCATCAGATTCT +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFSHSLP*GSASDS
Trigger: AGAATCTGATGCAGACCCTCATGGAAGACTATGAGA...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGTCAGTTTCTCTAGGATaGTTTGCTCTTTGGCAGATA +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKESVSLG*FALWQI
Trigger: TATCTGCCAAAGAGCAAATCATCCTAGAGAAACTGA...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACTGGAGAAACCCTTCTaGAAGTCCTTGAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKLEKPF*KSLKDF
Trigger: AAAATCCTTCAAGGACTTTCAGAAGGGTTTCTCCAG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTGTTCCTTGGGATGGCTaGGGCTCCCATCTGCAATCA +
Preference number: 4 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSVPWDG*GSHLQS
Trigger: TGATTGCAGATGGGAGCCTCAGCCATCCCAAGGAAC...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAATCATGGTGACGGGCTaGTCCAAGTTTGCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLIMVTG*SKFASG
Trigger: GCCGGAGGCAAACTTGGATCAGCCCGTCACCATGAT...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATGTCTTCTCCCTCAATaGCTTCTCATCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKCLLPQ*LLIIFI
Trigger: GATGAAGATGATGAGAAGTCATTGAGGGAGAAGACA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGACAGTGAGGTCTACGTaGGTGGTGGAGAGTACAGGC +
Preference number: 4 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMTVRST*VVESTG
Trigger: GCCTGTACTCTCCACCACTCACGTAGACCTCACTGT...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTAGTTCTTGGAGAGAATaGAGCACACACATGCACGTT +
Preference number: 4 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSSSWRE*STHMHV
Trigger: AACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACT...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTTGTGCTGTGGTCCCTTaGAATGAAATTCTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSCAVVP*NEILQE
Trigger: TTCCTGCAGAATTTCATTTCAAGGGACCACAGCACA...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATATGAAGAGGCAATATaGGGAGAAGACGACCCTTTA +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKYEEAI*GEDDPL
Trigger: TAAAGGGTCGTCTTCTCCTCATATTGCCTCTTCATA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGTGAAAACAGCTTTGTaGCTGTGGGAGAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKVKTAL*LWESPR
Trigger: TCTGGGACTCTCCCACAGTCACAAAGCTGTTTTCAC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp CTTTCTTCGATTAACCCGTGTGGCCTCGAGGACACTACTATCATCCATTCTCTCGGGATGGAGGAGGTTTaGCTTTCTCTATTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LSSINPCGLEDTTIIHSLGMEEV*LSLFSL
Trigger: GAGGGAAAATAGAGAAAGTCAAACCTCCTCCATCCC...GAGAGAATGGATGATAGTAGTGTCCTCGAGGCCACACGGGTTAATCGAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR GCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCACTCGATGTGAGGAGGTaGCTGCCGGCTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNALDVRR*LPASCS
Trigger: AGAACAGCTAGCCGGCAGGCACCTCCTCACATCGAG...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGTGCCCTTCTCTCTTTaGGCTCCTTGTACTTTTTGT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSVPFSL*APCTFC
Trigger: ACAAAAAGTACAAGGAGCGCAAAGAGAGAAGGGCAC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAAGCAGCAACTGTTCCTaGTGTGCCCTTCTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKSSNCS*CALLSL
Trigger: CAAAGAGAGAAGGGCACAGCAGGAACAGTTGCTGCT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATGCTGTAACTGCTTCTaGAGCAGCAACTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKCCNCF*SSNCSC
Trigger: GCAGGAACAGTTGCTGCTGCAGAAGCAGTTACAGCA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTTGCGATGGGGGCTGCTaGTGCTGCTGCTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTCDGGC*CCCCNC
Trigger: GCAGTTACAGCAGCAGCAGCAGCAGCCCCCATCGCA...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGCAGAGAAATCTATCTaGTCTGTGACAATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSAEKSI*SVTMSS
Trigger: GGAGGACATTGTCACAGAGCAGATAGATTTCTCTGC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGCAGAGAAATCTATCTaGTCTGTGACAATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQAEKSI*SVTMSS
Trigger: GGAGGACATTGTCACAGAGCAGATAGATTTCTCTGC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAAGTTGCCCTGGCTTCCTaGTGCCGATGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQVALAS*CRWGLQ
Trigger: CTGGAGACCCCATCGGCAGCAGGAAGCCAGGGCAAC...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTATCGGGCCACTGGGCTaGACAGCTGGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFIGPLG*TAGSGW
Trigger: CCAGCCACTGCCAGCTGTGCAGCCCAGTGGCCCGAT...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTATCGGGCCACTGGGCTaGACAGCTGGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVIGPLG*TAGSGW
Trigger: CCAGCCACTGCCAGCTGTGCAGCCCAGTGGCCCGAT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGGCTTCTCAGCTCAGCTaGCTCCGAGTACTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGASQLS*LRVLAE
Trigger: TTCAGCAAGTACTCGGAGGCAGCTGAGCTGAGAAGC...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGTTTGTCCTGGGGCTCTaGGTACTCTGCAAGACTTGT +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLFVLGL*VLCKTC
Trigger: ACAAGTCTTGCAGAGTACGCAGAGCCCCAGGACAAA...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAACCAGCGCAAAGCCAGTaGGCTCTTTCTTCGATTAAC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKPAQSQ*ALSSIN
Trigger: GTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTGG...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCTGCAGCCTTTCCTTGTaGAATTCCGCCTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSCSLSL*NSASAI
Trigger: GATGGCAGAGGCGGAATTGCACAAGGAAAGGCTGCA...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATTTTCTGCTATGGCTTaGAGCCTTTCCTTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKFSAMA*SLSLCN
Trigger: ATTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACATTGGACTTGGAATGCTaGAGCAGAAGTATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTLDLEC*SRSICS
Trigger: CGAGCAGATACTTCTGCTGCAGCATTCCAAGTCCAA...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGAACTTTGGACTTGGAATaGTGCAGCAGAAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRTLDLE*CSRSIC
Trigger: GCAGATACTTCTGCTGCAGCATTCCAAGTCCAAAGT...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATCAGTTCCAGCGGGTATaGCCTGCAGCAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDQFQRV*PAAAIS
Trigger: AGAAATGGCTGCTGCAGGGCATACCCGCTGGAACTG...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTCATCCTCTTCAGACTaGCGCCTCCTGGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMSSSSD*RLLASS
Trigger: GGAGGAAGCCAGGAGGCGGCAGTCTGAAGAGGATGA...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGTTCTCTAGGATGATTTaGTCTTTGGCAGATATCTGG +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEFSRMI*SLADIW
Trigger: CCAGATATCTGCCAAAGAGCAAATCATCCTAGAGAA...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCAGCCTGGGCCCTACTaGTCTCTAAGTGGCCCTACC +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTQPGPY*SLSGPT
Trigger: GGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTG...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAACCTGTACACCCAAGTaGCACGGTCACTCTGGAATT +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKTCTPK*HGHSGI
Trigger: AATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATCAAAGCAATTCAACTaGAAGGCAAGGCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKSKQFN*KARQVF
Trigger: AAACACCTGCCTTGCCTTGCAGTTGAATTGCTTTGA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTACACATCTCGGCTCATTaGAACCCCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLHISAH*NPCLPG
Trigger: ACCTGGGAGGCAGGGGTTGCAATGAGCCGAGATGTG...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATTTGCCCAGGCTGGAGTaGACATCTCGGCTCATTGCA +
Preference number: 4 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDLPRLE*TSRLIA
Trigger: TGCAATGAGCCGAGATGTGCACTCCAGCCTGGGCAA...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTCCTTTGGGCCACACCTaGAAGGTTCTGCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSPLGHT*KVLPQC
Trigger: GCATTGAGGCAGAACCTTGCAGGTGTGGCCCAAAGG...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGCATGTTTTTGTGATCTaGGGAAAGAGAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRHVFVI*GKRAGS
Trigger: GCTGCCAGCTCTCTTTCCCCAGATCACAAAAACATG...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTGATAGCGGATCTCTCTaGCAACATCATTATCCAGGG +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSDSGSL*QHHYPG
Trigger: CCCTGGATAATGATGTTGCCAGAGAGATCCGCTATC...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTCAGAATCACAGCAGTTaGCCTCTAGCACCTCATCTA +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSQNHSS*PLAPHL
Trigger: TAGATGAGGTGCTAGAGGCCAACTGCTGTGATTCTG...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAACACGCAGCTCAAACTTaGCCTCCTTTTTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKHAAQT*PPFSVW
Trigger: CCACACTGAAAAAGGAGGCCAAGTTTGAGCTGCGTG...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGGCTTCTTGTCCTCATaGAAGGCACGCAGCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIGFLSS*KARSSN
Trigger: GTTTGAGCTGCGTGCCTTCCATGAGGACAAGAAGCC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTCATCCTCAAAGAGCTTaGAGGGCTTCTTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSHPQRA*RASCPH
Trigger: ATGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATG...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAGTGTACTCTGGCCCTTaGCCACCGCTTGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWREVYSGP*PPLAWN
Trigger: ATTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACAC...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAAAGCCTGGGTGTACTCTaGCCCTTGGCCACCGCTTGC +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQSLGVL*PLATAC
Trigger: GCAAGCGGTGGCCAAGGGCCAGAGTACACCCAGGCT...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGGGTCTCCAGGACTGTaGTATCCTGAGACCTCACCG +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAGSPGL*YPETSP
Trigger: CGGTGAGGTCTCAGGATACCACAGTCCTGGAGACCC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CAAAATATTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTGGGTCTCCAGGACTGTaGTATCCTGAGACCTCACCG +
Preference number: 4 (lower is better)
Translates to: QNIQETQPYKDGANCPCAGSPGL*YPETSP
Trigger: CGGTGAGGTCTCAGGATACCACAGTCCTGGAGACCC...AGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAATATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGTTTCCTGGAGGGCATTaGTTGTCTCATTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLFPGGH*LSHWMP
Trigger: GGGCATCCAATGAGACAACCAATGCCCTCCAGGAAA...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTGCCAGTGAATTTTCCTaGAGGGCATTGGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSASEFS*RALVVS
Trigger: TGAGACAACCAATGCCCTCCAGGAAAATTCACTGGC...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAAGAAGACACCTGAGGTaGCTCAAACATGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKRRHLR*LKHALR
Trigger: CCTCAGAGCATGTTTGAGCCACCTCAGGTGTCTTCT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTAGCTGGGGCCTTCAGTaGTGGGGGATGGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTSWGLQ*WGMEEV
Trigger: AACCTCCTCCATCCCCCACCACTGAAGGCCCCAGCT...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAAGATTCTTGGGCCGCTaGGTTCCGGCAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNARFLGR*VPAASS
Trigger: TGAAGAGGCTGCCGGAACCCAGCGGCCCAAGAATCT...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATCTCCCGAAGCACTTTaGACTTGGAATGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKSPEAL*TWNAAA
Trigger: TGCTGCAGCATTCCAAGTCCAAAGTGCTTCGGGAGA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGGCCGGATGTTTCTGTaGCGTTCGAGGCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAGRMFL*RSRLTH
Trigger: GTGAGTCAGCCTCGAACGCCACAGAAACATCCGGCC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAACTACTGCTCTCTAAGTaGCCCTACCACCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKLLLSK*PYHHCP
Trigger: AGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAG...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAAGGAGAAGAAAGAAGTaGTCACATGACAACACAGCA +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKRRRKK*SHDNTA
Trigger: TGCTGTGTTGTCATGTGACCACTTCTTTCTTCTCCT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGCTTTGTTGCCCAGGCTaGAGTGCACATCTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMLCCPG*SAHLGS
Trigger: TGAGCCGAGATGTGCACTCCAGCCTGGGCAACAAAG...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCTTCTTATATTATACTaGAAAGGAGAGGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKELLILY*KGEGKQ
Trigger: CTGCTTCCCCTCTCCTTTCCAGTATAATATAAGAAG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGAAGGAAGGATGATGCTTaGGAAGAGAGTCTCACAAGA +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRRKDDA*EESLTR
Trigger: TCTTGTGAGACTCTCTTCCCAAGCATCATCCTTCCT...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGAGGATCTTCAGTGAGTaGAGCAAGAAGATAGACAGC +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWRIFSE*SKKIDS
Trigger: GCTGTCTATCTTCTTGCTCCACTCACTGAAGATCCT...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTTCCATGTTTTTGTaGTCTGGGGAAAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQISMFL*SGEREL
Trigger: CAGCTCTCTTTCCCCAGATCACAAAAACATGGAAAT...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCTCCAGGGATTCGTGGTaGTCAGTAAGGAGGCCATTA +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSSRDSW*SVRRPL
Trigger: TAATGGCCTCCTTACTGATCACCACGAATCCCTGGA...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTTTACTGAGCTCGATGTaGGGAGGTGCCTGCCGGCTA +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVLLSSM*GGACRL
Trigger: TAGCCGGCAGGCACCTCCTCACATCGAGCTCAGTAA...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTTGTGGAGCTGGGGCTaGCAGGCACCTGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVLWSWG*QAPAGC
Trigger: ACAGCCTGCAGGTGCCTGTCAGCCCCAGCTCCACAA...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAACTCCAGCATCTCCTCTaGAGGCCTCACTTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKLQHLL*RPHFSN
Trigger: ATTAGAAAAGTGAGGCCTTCAGAGGAGATGCTGGAG...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTAATCTATCTGCTCTGTaGCAATGTCCTCCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSNLSAL*QCPPLL
Trigger: AAGCAAAGGAGGACATTGTCACAGAGCAGATAGATT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CAAAATATTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTGCCTGTAGAAAGGCTTaGTGGAGAACAGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QNIQETQPYKDGANCPCAACRKA*WRTAWV
Trigger: CACCCAGGCTGTTCTCCATCAAGCCTTTCTACAGGC...AGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAATATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCTGTCCCTTGGCGGCTaGGGCACCACTGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFLSLGG*GTTVFW
Trigger: CCAGAAGACAGTGGTGCCTCAGCCGCCAAGGGACAG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGACATTGACAGATCTTaGGAACTGATCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSDIDRS*ELIQNP
Trigger: GGGATTTTGGATCAGTTCTCAAGATCTGTCAATGTC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGACATTGACAGATCTTaGGAACTGATCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQDIDRS*ELIQNP
Trigger: GGGATTTTGGATCAGTTCTCAAGATCTGTCAATGTC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGACCATGATCACTAAATaGCTTGGAGACGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLTMITK*LGDAFS
Trigger: GGAGAAGGCGTCTCCAAGTCATTTAGTGATCATGGT...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTGCTCTGAGGCTTTTCTaGGCCGAAAGCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTALRLF*AESRSF
Trigger: GAAGCTGCGGCTTTCGGCTCAGAAAAGCCTCAGAGC...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CAAAATATTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTTCCTGGACCTCAGCTTaGAAGGCCCAACCATCACGT +
Preference number: 4 (lower is better)
Translates to: QNIQETQPYKDGANCPCASWTSA*KAQPSR
Trigger: ACGTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGA...AGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAATATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAATCCTCTTCCCTTTCCTaGGCTGCTCGGATCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWRESSSLS*AARISS
Trigger: GGAAGAGATCCGAGCAGCTCAGGAAAGGGAAGAGGA...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGAAGTCCTTTCTCTTTTaGTTCCTGGGTGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRKSFLF*FLGVQS
Trigger: ACTCTGGACACCCAGGAATCAAAAGAGAAAGGACTT...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATCAGTTTCTCTAGGATaGTTTGCTCTTTGGCAGATA +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKSVSLG*FALWQI
Trigger: TATCTGCCAAAGAGCAAATCATCCTAGAGAAACTGA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR TCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACTGGAGAAACCCTTCTaGAAGTCCTTGAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRLEKPF*KSLKDF
Trigger: AAAATCCTTCAAGGACTTTCAGAAGGGTTTCTCCAG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTTCTTTGTATCATCCTaGAACACACTGGTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFFFVSS*NTLVAQ
Trigger: CTGAGCAACCAGTGTGTTTCAGGATGATACAAAGAA...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTTCTTTGTATCATCCTaGAACACACTGGTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSFFVSS*NTLVAQ
Trigger: CTGAGCAACCAGTGTGTTTCAGGATGATACAAAGAA...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGGGACCAATTCAGCCTTaGTGGTTTCATCATAGCCTA +
Preference number: 4 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQGPIQP*WFHHSL
Trigger: TAGGCTATGATGAAACCATCAAGGCTGAATTGGTCC...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACAAAAGAAGTGGTCACATaGCAACACAGCATTGACAGC +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTKEVVT*QHSIDS
Trigger: GCTGTCAATGCTGTGTTGTCATGTGACCACTTCTTT...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGACAGAAAGAAAGCCATaGATGCACAATACTGTAATC +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKETERKP*MHNTVI
Trigger: GATTACAGTATTGTGCATTCATGGCTTTCTTTCTGT...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACAGCTTTGGGGGAGTGCTaGGAAGGTATTTCAAAAACT +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTALGEC*EGISKT
Trigger: AGTTTTTGAAATACCTTCTCAGCACTCCCCCAAAGC...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTCTCTACCAGATCCATaGGTCAGAGAAAACATGAAG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSSLPDP*VRENMK
Trigger: CTTCATGTTTTCTCTGACTCATGGATCTGGTAGAGA...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAAGCTCTGGAGGAAAGTaGACACCTATAAACACGGCA +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKSSGGK*TPINTA
Trigger: TGCCGTGTTTATAGGTGTTCACTTTCCTCCAGAGCT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGCCCACCAGAACCACTaGACCAGGCTCTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVAHQNH*TRLWGG
Trigger: TCCTCCCCAGAGCCTGGTGCAGTGGTTCTGGTGGGC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGCCCACCAGAACCACTaGACCAGGCTCTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEAHQNH*TRLWGG
Trigger: TCCTCCCCAGAGCCTGGTGCAGTGGTTCTGGTGGGC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGCCCACCAGAACCACTaGACCAGGCTCTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFAHQNH*TRLWGG
Trigger: TCCTCCCCAGAGCCTGGTGCAGTGGTTCTGGTGGGC...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTCTCGATGTGAGGAGGTaGCTGCCGGCTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVLDVRR*LPASCS
Trigger: AGAACAGCTAGCCGGCAGGCACCTCCTCACATCGAG...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTAAGAGGCAGGGGCTGTaGAGAGCTGCGATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVKRQGL*RAAMGA
Trigger: AGCCCCCATCGCAGCTCTGCACAGCCCCTGCCTCTT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTTTTGTCAATCATGCTTaGGCGTTCATGAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSFVNHA*AFMRRG
Trigger: GCCTCTTCTCATGAACGCGCAAGCATGATTGACAAA...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTTGCTTTGTCAATCATaGTTGCGCGTTCATGAGAAG +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSLLCQS*LRVHEK
Trigger: CTTCTCATGAACGCGCAAGCATGATTGACAAAGCAA...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGACAATGTCCTCCTTTaGTTTGTCAATCATGCTTGC +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSDNVLL*FVNHAC
Trigger: GCAAGCATGATTGACAAAGCAAAGGAGGACATTGTC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGTTGCCCTGGCTTCCTaGTGCCGATGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIVALAS*CRWGLQ
Trigger: CTGGAGACCCCATCGGCAGCAGGAAGCCAGGGCAAC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGCCCTGGCTTCCTaGTGCCGATGGGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFVALAS*CRWGLQ
Trigger: CTGGAGACCCCATCGGCAGCAGGAAGCCAGGGCAAC...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGGGTTGTCTCATTGGATaGCCCGCTGTCACTGATGTT +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGGCLIG*PAVTDV
Trigger: AACATCAGTGACAGCGGGGCATCCAATGAGACAACC...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGAGGTCCCTGTTGCTCTaGTCCATCCCTGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRRSLLL*SIPAGF
Trigger: AAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCT...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGTTGGCATAGATCCCTaGTTCCCAGCGCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAVGIDP*FPAQSQ
Trigger: CTGGCTTTGCGCTGGGAAGCAGGGATCTATGCCAAC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTGTGCAATTCCGCCTCTaGCATCCTGGAGAAGGGCAC +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVVQFRL*HPGEGH
Trigger: GTGCCCTTCTCCAGGATGGCAGAGGCGGAATTGCAC...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGATGTTATCTTCAAGTTaGTTGACTCTGAACTCATCC +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEMLSSS*LTLNSS
Trigger: GGATGAGTTCAGAGTCAAGCAACTTGAAGATAACAT...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGCAGGTGGGAAACTGGTaGAGGGAAATATCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRQVGNW*REISCA
Trigger: GGCACAGGATATTTCCCTGCACCAGTTTCCCACCTG...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAACCTGTACACCCAAGTaGCACGGTCACTCTGGAATT +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILITCTPK*HGHSGI
Trigger: AATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGT...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCTTCTACATCCTTTGTaGTTAATTTGTGCACTCCAT +
Preference number: 4 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKELLHPL*LICALH
Trigger: ATGGAGTGCACAAATTAAGCACAAAGGATGTAGAAG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTGGGCTGATCCAAGTTTaGCTCCGGCCCTGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPGLIQV*LRPCSA
Trigger: AGCGCTGCAGGGCCGGAGGCAAACTTGGATCAGCCC...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGGGCAAGGCAGGTGTTTaGTTCCAGTTCACAGTATTG +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRGKAGV*FQFTVL
Trigger: CAATACTGTGAACTGGAAGCAAACACCTGCCTTGCC...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCTGCCAATTGCCCATGTaGTATTTGGGCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSCQLPM*YLGCHL
Trigger: CAGATGGCAGCCCAAATAGCACATGGGCAATTGGCA...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTTCCAGCCATCCTAACTaGCACTGTGCCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVSSHPN*HCAWGC
Trigger: ACAGCCCCAGGCACAGTGGCAGTTAGGATGGCTGGA...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGTTAACAAGCTTGTGTaGTATTTGGGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIVNKLV*YLGVGL
Trigger: CAGCCCCACCCCCAAATAGCACACAAGCTTGTTAAC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCTGGGGAAAGAGAGCTaGCAGCAGGCTCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFLGKES*QQAPGG
Trigger: CCCTCCTGGAGCCTGCTGCCAGCTCTCTTTCCCCAG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTCAGTGGGTTCTGGCTaGGTCGCCTCGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFSVGSG*VASWTG
Trigger: CCCTGTCCACGAGGCGACCCAGCCAGAACCCACTGA...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTCAGTGGGTTCTGGCTaGGTCGCCTCGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVSVGSG*VASWTG
Trigger: CCCTGTCCACGAGGCGACCCAGCCAGAACCCACTGA...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTCAGTGGGTTCTGGCTaGGTCGCCTCGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAESVGSG*VASWTG
Trigger: CCCTGTCCACGAGGCGACCCAGCCAGAACCCACTGA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAACATCCTCAAAGAGCTTaGAGGGCTTCTTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKHPQRA*RASCPH
Trigger: ATGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATG...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAAGCCTGGGTGTACTCTaGCCCTTGGCCACCGCTTGC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLISLGVL*PLATAC
Trigger: GCAAGCGGTGGCCAAGGGCCAGAGTACACCCAGGCT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAATCCCCCGACAGAAGGTaGTCTCGGATTAGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWRESPDRR*SRISQW
Trigger: CCACTGACTAATCCGAGACCACCTTCTGTCGGGGGA...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTGGGATTTCTGTCCCTTaGCGGCTGAGGCACCACTGT +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVGISVP*RLRHHC
Trigger: ACAGTGGTGCCTCAGCCGCCAAGGGACAGAAATCCC...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTGGGATTTCTGTCCCTTaGCGGCTGAGGCACCACTGT +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTGISVP*RLRHHC
Trigger: ACAGTGGTGCCTCAGCCGCCAAGGGACAGAAATCCC...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGAGGCTGTGTTGCCCTaGCTTCCTGCTGCCGATGGG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIEAVLP*LPAADG
Trigger: CCCATCGGCAGCAGGAAGCCAGGGCAACACAGCCTC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGAGGCTGTGTTGCCCTaGCTTCCTGCTGCCGATGGG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEEAVLP*LPAADG
Trigger: CCCATCGGCAGCAGGAAGCCAGGGCAACACAGCCTC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGGAGTCAAGCTCCTCTTaGGTCAAGGAGACATTGACA +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLESSSS*VKETLT
Trigger: TGTCAATGTCTCCTTGACCCAAGAGGAGCTTGACTC...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTGGGTCTCCAGGACTGTaGTATCCTGAGACCTCACCG +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTGSPGL*YPETSP
Trigger: CGGTGAGGTCTCAGGATACCACAGTCCTGGAGACCC...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCTTTCCTGGAGGGCATTaGTTGTCTCATTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSFPGGH*LSHWMP
Trigger: GGGCATCCAATGAGACAACCAATGCCCTCCAGGAAA...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGAGAGTCCCCCAGCGTaGAGGAAGGGGAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAESPPA*RKGNRN
Trigger: GTTTCTATTCCCCTTCCTCCACGCTGGGGGACTCTC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGTTTTGTAGCATGTTCTaGAGGGCAGTGATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLFCSMF*RAVMGH
Trigger: ATGCCCCATCACTGCCCTCCAGAACATGCTACAAAA...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTTCTGCATCAGATTCTTaGGCCGCTGGGTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVSASDS*AAGFRQ
Trigger: CTGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGA...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGGATCCATTGTAGATTaGCCCCAAACCAGACACTGG +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIGSIVD*PQTRHW
Trigger: CCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACAGAAGCACTTTGGACTTaGAATGCTGCAGCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTEALWT*NAAAEV
Trigger: TACTTCTGCTGCAGCATTCCAAGTCCAAAGTGCTTC...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCGCCAGCAAACAGCTCTaGAGGAATTACCTGTACACC +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSASKQL*RNYLYT
Trigger: GGTGTACAGGTAATTCCTCCAGAGCTGTTTGCTGGC...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTGGGATGAGGGCTCTGTaGTGTCTGAGACCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWAGMRAL*CLRPAS
Trigger: GGAGGCCGGTCTCAGACACCACAGAGCCCTCATCCC...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACAGAGAAACCAGAGACATaGCAGTGTGTGACTACGTTA +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTEKPET*QCVTTL
Trigger: TAACGTAGTCACACACTGCCATGTCTCTGGTTTCTC...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACACTGATGGGCAGGTTATaGAATCAGTCCCTACATTTC +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTLMGRL*NQSLHF
Trigger: GAAATGTAGGGACTGATTCCATAACCTGCCCATCAG...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGAGGCTTTGTAATCAACTaGGGAGGAGATGAACAGTTA +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRGFVIN*GGDEQL
Trigger: TAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCC...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATTTAAGCGATTTGCATaGGAACCAGAGGGGTTATTT +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKFKRFA*EPEGLF
Trigger: AAATAACCCCTCTGGTTCCCATGCAAATCGCTTAAA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGTGGAGTTGGGCCTGTTaGAGAGATTCTGGTGATGAA +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRWSWAC*RDSGDE
Trigger: TTCATCACCAGAATCTCTCCAACAGGCCCAACTCCA...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTACAGCTGGGCTGGAGTTaGGCCTGTTGGAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLQLGWS*ACWRDS
Trigger: AGAATCTCTCCAACAGGCCCAACTCCAGCCCAGCTG...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTGAGATTAGAGTAAACTaGCTCTCCATTAGCACCTTC +
Preference number: 4 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSEIRVN*LSISTF
Trigger: GAAGGTGCTAATGGAGAGCCAGTTTACTCTAATCTC...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTATTCCGCGAATAGTGTaGCCTCTTAAGCTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSIPRIV*PLKLFS
Trigger: AGAGAAAAGCTTAAGAGGCCACACTATTCGCGGAAT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTAGGATCTTCAGTGAGTaGAGCAAGAAGATAGACAGC +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSRIFSE*SKKIDS
Trigger: GCTGTCTATCTTCTTGCTCCACTCACTGAAGATCCT...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR CAA 72 bp ATTGCTCAGAAGGCTCAAGGAAACTGTGTTTTAGGTTaGGCCATAAGGGCATTCCCTACCTTCTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: IAQKAQGNCVLG*AIRAFPTFSST
Trigger: GGTGGAAGAGAAGGTAGGGAATGCCCTTATGGCCAAACCTAAAACACAGTTTCCTTGAGCCTTCTGAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGGGTCAAGGAGACATTaGCAGATCTTGAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKGSRRH*QILRTD
Trigger: ATCAGTTCTCAAGATCTGTCAATGTCTCCTTGACCC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGGGGTCAAGGAGACATTaGCAGATCTTGAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLGSRRH*QILRTD
Trigger: ATCAGTTCTCAAGATCTGTCAATGTCTCCTTGACCC...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTTCCTGGACCTCAGCTTaGAAGGCCCAACCATCACGT +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVSWTSA*KAQPSR
Trigger: ACGTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGA...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCATGTTCTGGAGGGCAGTaGTGGGGCATTCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNACSGGQ*WGILCP
Trigger: AGGACAAAGAATGCCCCATCACTGCCCTCCAGAACA...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTTATTCTCTCATAGTCTTCCATaGGGGTCTGCATCAGATTCT +
Preference number: 4 (lower is better)
Translates to: FLGLPSTKDASWVEGSLFSHSLP*GSASDS
Trigger: AGAATCTGATGCAGACCCTCATGGAAGACTATGAGA...GAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR TCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAAAGTCCTTTCTCTTTTaGTTCCTGGGTGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKKSFLF*FLGVQS
Trigger: ACTCTGGACACCCAGGAATCAAAAGAGAAAGGACTT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGTCTTGCTCCAGCCTCTaGATGTTATCTTCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRSCSSL*MLSSSC
Trigger: GCAACTTGAAGATAACATTCAGAGGCTGGAGCAAGA...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTCAGTTTCTCTAGGATaGTTTGCTCTTTGGCAGATA +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQSVSLG*FALWQI
Trigger: TATCTGCCAAAGAGCAAATCATCCTAGAGAAACTGA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR TCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTGGTTCTGCTGTTCGTaGACAGAGGATTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMWFCCS*TEDWQV
Trigger: GACCTGCCAATCCTCTGTTCACGAACAGCAGAACCA...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTTCGTGTTTCCTTTCTaGTTGATCCAAAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQFVFPF*LIQKES
Trigger: GGATTCCTTTTGGATCAATCAGAAAGGAAACACGAA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGCATCATCATAGACTTTaGCTCCTTTCTGATGGACCC +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRHHHRL*LLSDGP
Trigger: GGGTCCATCAGAAAGGAGTCAAAGTCTATGATGATG...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGGATTGTCCAGCCTTCTaGATAAGCTCTTCTACATCC +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRDCPAF*ISSSTS
Trigger: GGATGTAGAAGAGCTTATTCAGAAGGCTGGACAATC...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACATGTCTTCTCCCTCAATaGCTTCTCATCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTCLLPQ*LLIIFI
Trigger: GATGAAGATGATGAGAAGTCATTGAGGGAGAAGACA...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACAATGACAACACAGCATTaGCAGCGCTTTTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTMTTQH*QRFFFW
Trigger: CCAAAAGAAAAAGCGCTGTCAATGCTGTGTTGTCAT...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACATCTGTCCTGGAAGATTaGTTCTGTTTATCAACCAGC +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTSVLED*FCLSTS
Trigger: GCTGGTTGATAAACAGAATCAATCTTCCAGGACAGA...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTGGCTGTCCAGATCTTTaGTGCAGAAAGTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSGCPDL*CRKSAV
Trigger: GACTGCAGACTTTCTGCATCAAAGATCTGGACAGCC...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGTCCAGAAGGACTGTCTaGAGTCTAGGGAGAATTTTA +
Preference number: 4 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQSRRTV*SLGRIL
Trigger: TAAAATTCTCCCTAGACTTCAGACAGTCCTTCTGGA...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGATGGTCAGAGGGCTCTaGCTCACCGTTTCATATATA +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRMVRGL*LTVSYI
Trigger: TATATATGAAACGGTGAGTCAGAGCCCTCTGACCAT...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGAGGGCACCCAATTATTaGATACCCTTATCATATTGC +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWRAPNY*IPLSYC
Trigger: GCAATATGATAAGGGTATTCAATAATTGGGTGCCCT...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAACTCGATGTGAGGAGGTaGCTGCCGGCTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQLDVRR*LPASCS
Trigger: AGAACAGCTAGCCGGCAGGCACCTCCTCACATCGAG...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAGCCATTTGTTCTTTCTaGCTCTGCCATGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWREAICSF*LCHGVR
Trigger: CCTGACCCCATGGCAGAGGCAGAAAGAACAAATGGC...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTATTGTTCTTTCTCATaGTCGTCATCCTCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQYCSFS*SSSSKS
Trigger: GCTCTTTGAGGATGACGAGCATGAGAAAGAACAATA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGTGCCCTTCTCTCTTTaGGCTCCTTGTACTTTTTGT +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKVPFSL*APCTFC
Trigger: ACAAAAAGTACAAGGAGCGCAAAGAGAGAAGGGCAC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTGCGATGGGGGCTGCTaGTGCTGCTGCTGTAACTGC +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFCDGGC*CCCCNC
Trigger: GCAGTTACAGCAGCAGCAGCAGCAGCCCCCATCGCA...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGTTGCTTTGTCAATCATaGTTGCGCGTTCATGAGAAG +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRLLCQS*LRVHEK
Trigger: CTTCTCATGAACGCGCAAGCATGATTGACAAAGCAA...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGCAGAGAAATCTATCTaGTCTGTGACAATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKAEKSI*SVTMSS
Trigger: GGAGGACATTGTCACAGAGCAGATAGATTTCTCTGC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGTCAGCTGAAATTGTTTaGGAGCAGCAGAGAAATCTA +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWSAEIV*EQQRNL
Trigger: TAGATTTCTCTGCTGCTCGCAAACAATTTCAGCTGA...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTGGGCTCTGCGTACTCTaGAAGACTTGTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTGLCVL*KTCLCL
Trigger: GAGGCAGAGACAAGTCTTGCAGAGTACGCAGAGCCC...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAATCTTCCATGAGGGTCTaGATCAGATTCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWRESSMRV*IRFLGR
Trigger: GCGGCCCAAGAATCTGATGCAGACCCTCATGGAAGA...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTCCAGCGGGTATGCCCTaGAGCAGCCATTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVPAGMP*SSHFSR
Trigger: TCGGGAGAAATGGCTGCTGCAGGGCATACCCGCTGG...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACTGCTGGTCCCGTCCTaGCCAGGTGATGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLILLVPS*PGDGSA
Trigger: AGCAGAACCATCACCTGGGCAGGACGGGACCAGCAG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCTGCTGGTCCCGTCCTaGCCAGGTGATGGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAELLVPS*PGDGSA
Trigger: AGCAGAACCATCACCTGGGCAGGACGGGACCAGCAG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCTGTGCCATGTAGGCTaGACCAGCCTGGGCCCTACT +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAELCHVG*TSLGPT
Trigger: AGTAGGGCCCAGGCTGGTGCAGCCTACATGGCACAG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCACAGGTGGGAAACTGGTaGAGGGAAATATCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAQVGNW*REISCA
Trigger: GGCACAGGATATTTCCCTGCACCAGTTTCCCACCTG...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTTTCTACTACGGTaGCTCCTGAGCGCACCTCAT +
Preference number: 4 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMHFLLR*LLSAPH
Trigger: ATGAGGTGCGCTCAGGAGGCACCGTAGTAGAAAATG...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACTTCTACATCCTTTGTaGTTAATTTGTGCACTCCAT +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKLLHPL*LICALH
Trigger: ATGGAGTGCACAAATTAAGCACAAAGGATGTAGAAG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR GCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGAGTTTCGCTCTTTGTTaGCCAGGCTGGAGTGCACAT +
Preference number: 4 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMSFALC*PGWSAH
Trigger: ATGTGCACTCCAGCCTGGGCAACAAAGAGCGAAACT...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGCTGTCTATGTCCATCTaGGTTTTATATTGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRLSMSI*VLYWQG
Trigger: GCCCTGCCAATATAAAACGCAGATGGACATAGACAG...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAAGAAAAAGTCCTCGATaGTTATTCTGTCTATGTCCA +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKRKSPR*LFCLCP
Trigger: TGGACATAGACAGAATAAGCATCGAGGACTTTTTCT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCCTGTGCTTAAAAATATaGTCCCAGATCCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ATYRIVWIRHCLVASVYILCLKI*SQIQLG
Trigger: CCCCAACTGGATCTGGGAGCATATTTTTAAGCACAG...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTGTTTGGATCAGGCATTaGCTGGTGGCCTCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSVWIRH*LVASVY
Trigger: ATACACAGAGGCCACCAGGCAATGCCTGATCCAAAC...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGACTGCATCAGCTCGGTaGCTTTATATCCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRTASAR*LYIPFH
Trigger: ATGAAAAGGGATATAAAGGCACCGAGCTGATGCAGT...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp CAAAATATTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTGCTGTGCAATGCTGCTaGCTCCTCTGTTCTTATCCC +
Preference number: 4 (lower is better)
Translates to: QNIQETQPYKDGANCPCAAVQCC*LLCSYP
Trigger: GGGATAAGAACAGAGGAGGCAGCAGCATTGCACAGC...AGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAATATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGGGGCTGTGCAATGCTaGTGCCTCCTCTGTTCTTAT +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAGAVQC*CLLCSY
Trigger: ATAAGAACAGAGGAGGCAGCAGCATTGCACAGCCCC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAATGGTCCATGGGATGTaGGGTAGAGGTGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWREMVHGM*GRGDSR
Trigger: CCTGGAATCACCTCTACCCCACATCCCATGGACCAT...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGAGTCAAGCTCCTCTTaGGTCAAGGAGACATTGACA +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIESSSS*VKETLT
Trigger: TGTCAATGTCTCCTTGACCCAAGAGGAGCTTGACTC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCGAGTCAAGCTCCTCTTaGGTCAAGGAGACATTGACA +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSESSSS*VKETLT
Trigger: TGTCAATGTCTCCTTGACCCAAGAGGAGCTTGACTC...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTGAGAGTCCCCCAGCGTaGAGGAAGGGGAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTESPPA*RKGNRN
Trigger: GTTTCTATTCCCCTTCCTCCACGCTGGGGGACTCTC...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCTGCTCCATCCCTGCTaGTTTTGGACACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSLLHPC*FWTQLY
Trigger: ATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAG...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCTCCATCCCTGCTaGTTTTGGACACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGLLHPC*FWTQLY
Trigger: ATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAG...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATCTCTTCCTCAATCATaGACAAAGTCCGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKSLPQS*TKSAVS
Trigger: GGAAACAGCGGACTTTGTCCATGATTGAGGAAGAGA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAAGCTGGGGCCTTCAGTaGTGGGGGATGGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLISWGLQ*WGMEEV
Trigger: AACCTCCTCCATCCCCCACCACTGAAGGCCCCAGCT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTAATTTCTTGGTTTCTTaGTCTCCCAAGCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: TALEELPVHPSATVTLEFNFLVS*SPKHQR
Trigger: TCTTTGGTGCTTGGGAGACCAAGAAACCAAGAAATT...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGAAGCACTTTGGACTTaGAATGCTGCAGCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKEALWT*NAAAEV
Trigger: TACTTCTGCTGCAGCATTCCAAGTCCAAAGTGCTTC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCTCATCCTCAGAAAGCTaGGGAGGCTTCTTGATAGTC +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSSSSES*GGFLIV
Trigger: GACTATCAAGAAGCCTCCCCAGCTTTCTGAGGATGA...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTATCGCCCAGAGAGGCTaGTCTCAGTTCCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVIAQRG*SQFRLQ
Trigger: CTGCAGGCGGAACTGAGACCAGCCTCTCTGGGCGAT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAATCGCCCAGAGAGGCTaGTCTCAGTTCCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIIAQRG*SQFRLQ
Trigger: CTGCAGGCGGAACTGAGACCAGCCTCTCTGGGCGAT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACCTCATACACTACTTTaGTACCATCATCATAGACTT +
Preference number: 4 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKPHTLL*YHHHRL
Trigger: AAGTCTATGATGATGGTACCAAAGTAGTGTATGAGG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGAGGCTACCATATCACTaGCTGATACGAAGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRRLPYH*LIRRVH
Trigger: ATGGACTCTTCGTATCAGCCAGTGATATGGTAGCCT...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTACGCCCCCTTATCGCTaGGTTCTCAGCCCAGGCATC +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFTPPYR*VLSPGI
Trigger: GATGCCTGGGCTGAGAACCCAGCGATAAGGGGGCGT...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGTGGTTCAATCAACTGTaGTCAAAGACCACTTCATCT +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWWFNQL*SKTTSS
Trigger: AGATGAAGTGGTCTTTGACCACAGTTGATTGAACCA...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGTAGTTAATCAGCTCTaGAGGAAAGTGAACACCTAT +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQVVNQL*RKVNTY
Trigger: ATAGGTGTTCACTTTCCTCCAGAGCTGATTAACTAC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
3UTR CAA 72 bp AGTTGGAGCTACATACAGAATAGTTTGGATCAGGCATaGCCTGGTGGCCTCTGTGTATATCAAGACCTGTCA +
Preference number: 4 (lower is better)
Translates to: SWSYIQNSLDQA*PGGLCVYQDLS
Trigger: TGACAGGTCTTGATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGCTCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTTACTGAGCTCGATGTaGGGAGGTGCCTGCCGGCTA +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFLLSSM*GGACRL
Trigger: TAGCCGGCAGGCACCTCCTCACATCGAGCTCAGTAA...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAATGCTTGCGCGTTCATaGGAAGAGGCAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIMLARS*EEAGAV
Trigger: CACAGCCCCTGCCTCTTCTCATGAACGCGCAAGCAT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAAATCTATCTGCTCTGTaGCAATGTCCTCCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKNLSAL*QCPPLL
Trigger: AAGCAAAGGAGGACATTGTCACAGAGCAGATAGATT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTGGCTTGTCTGAGTTaGCTGACCCCAGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFVACLS*LTPEAC
Trigger: ACAGGCCTCTGGGGTCAGTCAACTCAGACAAGCCAC...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGGACATTGACAGATCTTaGGAACTGATCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLDIDRS*ELIQNP
Trigger: GGGATTTTGGATCAGTTCTCAAGATCTGTCAATGTC...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGACATTGACAGATCTTaGGAACTGATCCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKDIDRS*ELIQNP
Trigger: GGGATTTTGGATCAGTTCTCAAGATCTGTCAATGTC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTTCTCCTCGGCCCTCTaGGGGGTTGTCAGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVFSSAL*GVVSLW
Trigger: CCACAAACTGACAACCCCTCAGAGGGCCGAGGAGAA...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTTCTCCTCGGCCCTCTaGGGGGTTGTCAGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFFSSAL*GVVSLW
Trigger: CCACAAACTGACAACCCCTCAGAGGGCCGAGGAGAA...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTCTCCTCGGCCCTCTaGGGGGTTGTCAGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEFSSAL*GVVSLW
Trigger: CCACAAACTGACAACCCCTCAGAGGGCCGAGGAGAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTTCGGCTATGGCTTGTTaGATGGCATTCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTSAMAC*MAFCTR
Trigger: CCTGGTGCAGAATGCCATTCAACAAGCCATAGCCGA...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGCTCTGAGGCTTTTCTaGGCCGAAAGCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEALRLF*AESRSF
Trigger: GAAGCTGCGGCTTTCGGCTCAGAAAAGCCTCAGAGC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTACAGGAGAAGACACCTaGGGTGGCTCAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVTGEDT*GGSNML
Trigger: GAGCATGTTTGAGCCACCTCAGGTGTCTTCTCCTGT...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTTGTTCTGGAGGGCAGTaGTGGGGCATTCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTCSGGQ*WGILCP
Trigger: AGGACAAAGAATGCCCCATCACTGCCCTCCAGAACA...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTTGTTCTGGAGGGCAGTaGTGGGGCATTCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVCSGGQ*WGILCP
Trigger: AGGACAAAGAATGCCCCATCACTGCCCTCCAGAACA...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCTCTCATAGTCTTCCATaGGGGTCTGCATCAGATTCT +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSSHSLP*GSASDS
Trigger: AGAATCTGATGCAGACCCTCATGGAAGACTATGAGA...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTCTGCAGCAACTATGTTaGTTTGCTTGTAACATGTTT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSLQQLC*FACNMF
Trigger: AAACATGTTACAAGCAAATCAACATAGTTGCTGCAG...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTATGCCCCCACCATCTTaGACCAAGTTGTTCAACGCG +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTMPPPS*TKLFNA
Trigger: CGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCAT...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTATCATGGTGACGGGCTaGTCCAAGTTTGCCTCCGGC +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPIMVTG*SKFASG
Trigger: GCCGGAGGCAAACTTGGATCAGCCCGTCACCATGAT...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCATGACAACACAGCATTaGCAGCGCTTTTTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIMTTQH*QRFFFW
Trigger: CCAAAAGAAAAAGCGCTGTCAATGCTGTGTTGTCAT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTGAACACACTACAAAATaGAACCCCCAGTGCCAATGG +
Preference number: 4 (lower is better)
Translates to: SLTPSEMLKLKISPTTYIEHTTK*NPQCQW
Trigger: CCATTGGCACTGGGGGTTTCATTTTGTAGTGTGTTC...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTAGACATGGCAGTGTGTaGCTACGTTACAGGAACACA +
Preference number: 4 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSRHGSV*LRYRNT
Trigger: TGTGTTCCTGTAACGTAGTCACACACTGCCATGTCT...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCTCTGTCCTGGAAGATTaGTTCTGTTTATCAACCAGC +
Preference number: 4 (lower is better)
Translates to: ATYRIVWIRHCLVASVYISVLED*FCLSTS
Trigger: GCTGGTTGATAAACAGAATCAATCTTCCAGGACAGA...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGATTTTGCAGGCTTATATaGGAACACAGATACGTGTTT +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRFCRLI*EHRYVF
Trigger: AAACACGTATCTGTGTTCTCATATAAGCCTGCAAAA...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTTGCTTATGTGTAGACTaGAGATGGTCAGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SLTPSEMLKLKISPTTYICLCVD*RWSEGS
Trigger: AGAGCCCTCTGACCATCTTCAGTCTACACATAAGCA...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp GAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTAATAAAAAGGCCTCATCCTaGGGAAGGATGATGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ESSIFQPRPIWKHWISCNKKASS*GRMMLG
Trigger: CCCAAGCATCATCCTTCCTCAGGATGAGGCCTTTTT...ATTACATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGTCCCTCACTATAAAATaGATTTCTTGCAACAGGGAT +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWSLTIK*ISCNRD
Trigger: ATCCCTGTTGCAAGAAATTCATTTTATAGTGAGGGA...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGTCCATAATTTCTGGATaGGAAAGCCAAGTCATGTCA +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRSIISG*ESQVMS
Trigger: TGACATGACTTGGCTTTCTCATCCAGAAATTATGGA...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTCTCGATGTGAGGAGGTaGCTGCCGGCTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVLDVRR*LPASCS
Trigger: AGAACAGCTAGCCGGCAGGCACCTCCTCACATCGAG...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGATGGGGGCTGCTGCTaGTGCTGCTGTAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEDGGCC*CCCNCF
Trigger: GAAGCAGTTACAGCAGCAGCAGCAGCAGCCCCCATC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCCCTTGGCCACCGCTTaGCTGGAATTCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFPLATA*LEFSIS
Trigger: GCTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTCCCTTGGCCACCGCTTaGCTGGAATTCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVPLATA*LEFSIS
Trigger: GCTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGG...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTGCTCTGCTCCATCCCTaGTGGTTTTGGACACAGCTT +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVALLHP*WFWTQL
Trigger: AAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGC...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAACTTTGGACTTGGAATaGTGCAGCAGAAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILITLDLE*CSRSIC
Trigger: GCAGATACTTCTGCTGCAGCATTCCAAGTCCAAAGT...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCACTTTGGACTTGGAATaGTGCAGCAGAAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSTLDLE*CSRSIC
Trigger: GCAGATACTTCTGCTGCAGCATTCCAAGTCCAAAGT...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACAGGAAATGTAATTTACTaGATCTCCATCCGTACTGGA +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTGNVIY*ISIRTG
Trigger: TCCAGTACGGATGGAGATGCAGTAAATTACATTTCC...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTCAGGGAAATATCCTGTaGCATGTAGGCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVQGNIL*HVGCTS
Trigger: GCTGGTGCAGCCTACATGGCACAGGATATTTCCCTG...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACTTCTACATCCTTTGTaGTTAATTTGTGCACTCCAT +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRLLHPL*LICALH
Trigger: ATGGAGTGCACAAATTAAGCACAAAGGATGTAGAAG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAGTCCTTTCAGACACGTaGCCTCCTCCTAAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLVLSDT*PPPKLD
Trigger: ATCAAGCTTAGGAGGAGGGCACGTGTCTGAAAGGAC...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCAGGGTAGTTACTTGCTaGTATAGGTGGGATTATAGG +
Preference number: 4 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIRVVTC*YRWDYR
Trigger: CCTATAATCCCACCTATAGCAGCAAGTAACTACCCT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGCCCTCCCTCCTCTTTTaGTACCCATTGGTTCAACTG +
Preference number: 4 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMPSLLF*YPLVQL
Trigger: CAGTTGAACCAATGGGTAGCAAAAGAGGAGGGAGGG...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTATGGTCCATGGGATGTaGGGTAGAGGTGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVMVHGM*GRGDSR
Trigger: CCTGGAATCACCTCTACCCCACATCCCATGGACCAT...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTCACTGCACCAGGCTCTaGGGAGGATGTTCCATTGTA +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVHCTRL*GGCSIV
Trigger: TACAATGGAACATCCTCCCCAGAGCCTGGTGCAGTG...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATCTTTCAGTGGGTTCTaGCTGGGTCGCCTCGTGGAC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLISFSGF*LGRLVD
Trigger: GTCCACGAGGCGACCCAGCCAGAACCCACTGAAAGA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTTTTCTGCCTCTGCCATaGGGTCAGGGCTGCTATTAC +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTFLPLP*GQGCYY
Trigger: GTAATAGCAGCCCTGACCCCATGGCAGAGGCAGAAA...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAACACGCAGCTCAAACTTaGCCTCCTTTTTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWREHAAQT*PPFSVW
Trigger: CCACACTGAAAAAGGAGGCCAAGTTTGAGCTGCGTG...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTTGGCCACCGCTTGCCTaGAATTCTCCATCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTWPPLA*NSPSAE
Trigger: TTCAGCTGATGGAGAATTCCAGGCAAGCGGTGGCCA...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGTGTACTCTGGCCCTTaGCCACCGCTTGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVVYSGP*PPLAWN
Trigger: ATTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACAC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGTGTACTCTGGCCCTTaGCCACCGCTTGCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIVYSGP*PPLAWN
Trigger: ATTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACAC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGGGATTTCTGTCCCTTaGCGGCTGAGGCACCACTGT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFGISVP*RLRHHC
Trigger: ACAGTGGTGCCTCAGCCGCCAAGGGACAGAAATCCC...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGGGATTTCTGTCCCTTaGCGGCTGAGGCACCACTGT +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVGISVP*RLRHHC
Trigger: ACAGTGGTGCCTCAGCCGCCAAGGGACAGAAATCCC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGGGTCTCCAGGACTGTaGTATCCTGAGACCTCACCG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEGSPGL*YPETSP
Trigger: CGGTGAGGTCTCAGGATACCACAGTCCTGGAGACCC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCACCACCTGCTCGGCTATaGCTTGTTGAATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAPPARL*LVEWHS
Trigger: AGAATGCCATTCAACAAGCCATAGCCGAGCAGGTGG...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAACCACCTGCTCGGCTATaGCTTGTTGAATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWREPPARL*LVEWHS
Trigger: AGAATGCCATTCAACAAGCCATAGCCGAGCAGGTGG...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGTTTTGTAGCATGTTCTaGAGGGCAGTGATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRFCSMF*RAVMGH
Trigger: ATGCCCCATCACTGCCCTCCAGAACATGCTACAAAA...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTTTCTCTATTTTCCCTaGAGCAGTTTTGTAGCATGT +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSFLYFP*SSFVAC
Trigger: ACATGCTACAAAACTGCTCCAGGGAAAATAGAGAAA...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTTTCTCTATTTTCCCTaGAGCAGTTTTGTAGCATGT +
Preference number: 4 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQFLYFP*SSFVAC
Trigger: ACATGCTACAAAACTGCTCCAGGGAAAATAGAGAAA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TACAAAACCGCTCAAAACTTTGTAATTGTGACTCATGCAAATACCTTGTTAGGTAGATTCTTGGGCCGCTaGGTTCCGGCAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: YKTAQNFVIVTHANTLLGRFLGR*VPAASS
Trigger: TGAAGAGGCTGCCGGAACCCAGCGGCCCAAGAATCT...ACCTAACAAGGTATTTGCATGAGTCACAATTACAAAGTTTTGAGCGGTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTAATTTCTTGGTTTCTTaGTCTCCCAAGCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSNFLVS*SPKHQR
Trigger: TCTTTGGTGCTTGGGAGACCAAGAAACCAAGAAATT...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGGCCGGATGTTTCTGTaGCGTTCGAGGCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIGRMFL*RSRLTH
Trigger: GTGAGTCAGCCTCGAACGCCACAGAAACATCCGGCC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp CAAAATATTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTCTACTGCTCTCTAAGTaGCCCTACCACCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: QNIQETQPYKDGANCPCALLLSK*PYHHCP
Trigger: AGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAG...AGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAATATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTCTAACATCATCCATTTaGTTTGTTTTTCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSLTSSI*FVFLFP
Trigger: GGGGAAGAGAAAAACAAACCAAATGGATGATGTTAG...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGTGCCACGGTCACTCTaGAATTTTAATACACACACA +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKVPRSL*NFNTHT
Trigger: TGTGTGTGTATTAAAATTCCAGAGTGACCGTGGCAC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAGCCAGCAAACAGCTCTaGAGGAATTACCTGTACACC +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWREASKQL*RNYLYT
Trigger: GGTGTACAGGTAATTCCTCCAGAGCTGTTTGCTGGC...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACCTCATACACTACTTTaGTACCATCATCATAGACTT +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRPHTLL*YHHHRL
Trigger: AAGTCTATGATGATGGTACCAAAGTAGTGTATGAGG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACACCTTCATTTAGTGTaGCTACAAATAGCTCGAATA +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRHLHLV*LQIARI
Trigger: TATTCGAGCTATTTGTAGCCACACTAAATGAAGGTG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGTTCGACTATAACGAATaGGCACATTCCTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRFDYNE*AHSSVM
Trigger: CATGACTGAGGAATGTGCCCATTCGTTATAGTCGAA...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCACATACAGAATAGTTTaGATCAGGCATTGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ATYRIVWIRHCLVASVYITYRIV*IRHCLV
Trigger: CACCAGGCAATGCCTGATCCAAACTATTCTGTATGT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTCATCCTCAGAAAGCTaGGGAGGCTTCTCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAESSSES*GGFSGR
Trigger: GCGCCCAGAGAAGCCTCCCCAGCTTTCTGAGGATGA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000434623.6
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAATGCCCATGTGCTATTTaGGCTGCCATCTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWRECPCAI*AAICRM
Trigger: CATCCTACAGATGGCAGCCCAAATAGCACATGGGCA...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCATGCCCATGTGCTATTTaGGCTGCCATCTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNACPCAI*AAICRM
Trigger: CATCCTACAGATGGCAGCCCAAATAGCACATGGGCA...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAACTCAGCCCAGGCATCTaGGACCTCTGGCTAGAAATC +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQLSPGI*DLWLEI
Trigger: GATTTCTAGCCAGAGGTCCCAGATGCCTGGGCTGAG...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAATTTCCATGTTTTTGTaGTCTGGGGAAAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIISMFL*SGEREL
Trigger: CAGCTCTCTTTCCCCAGATCACAAAAACATGGAAAT...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGCCATTATGCGGGGGTaGATAGAAAGCGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVAIMRG*IESGGM
Trigger: CATCCCTCCGCTTTCTATTCACCCCCGCATAATGGC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGCCATTATGCGGGGGTaGATAGAAAGCGGAGGGATG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIAIMRG*IESGGM
Trigger: CATCCCTCCGCTTTCTATTCACCCCCGCATAATGGC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACAGGGCTGCTATTACTaGGCTCGATGTGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIQGCYY*ARCEEV
Trigger: CACCTCCTCACATCGAGCTCAGTAATAGCAGCCCTG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCAGGGCTGCTATTACTaGGCTCGATGTGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEQGCYY*ARCEEV
Trigger: CACCTCCTCACATCGAGCTCAGTAATAGCAGCCCTG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCAATCTATCTGCTCTGTaGCAATGTCCTCCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSNLSAL*QCPPLL
Trigger: AAGCAAAGGAGGACATTGTCACAGAGCAGATAGATT...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGCCTGTAGAAAGGCTTaGTGGAGAACAGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVACRKA*WRTAWV
Trigger: CACCCAGGCTGTTCTCCATCAAGCCTTTCTACAGGC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGCCTGTAGAAAGGCTTaGTGGAGAACAGCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIACRKA*WRTAWV
Trigger: CACCCAGGCTGTTCTCCATCAAGCCTTTCTACAGGC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTCCTGGACCTCAGCTTaGAAGGCCCAACCATCACGT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFSWTSA*KAQPSR
Trigger: ACGTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGA...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAGGGATGGAGGAGGTTTaGCTTTCTCTATTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWREGMEEV*LSLFSL
Trigger: CAGGGAAAATAGAGAAAGTCAAACCTCCTCCATCCC...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATTCTTGCTCCAGCCTCTaGATGTTATCTTCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDSCSSL*MLSSSC
Trigger: GCAACTTGAAGATAACATTCAGAGGCTGGAGCAAGA...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGTCTTGCTCCAGCCTCTaGATGTTATCTTCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRSCSSL*MLSSSC
Trigger: GCAACTTGAAGATAACATTCAGAGGCTGGAGCAAGA...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR TCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATCAGTTTCTCTAGGATaGTTTGCTCTTTGGCAGATA +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKSVSLG*FALWQI
Trigger: TATCTGCCAAAGAGCAAATCATCCTAGAGAAACTGA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR TCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCTGGAGAAACCCTTCTaGAAGTCCTTGAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSLEKPF*KSLKDF
Trigger: AAAATCCTTCAAGGACTTTCAGAAGGGTTTCTCCAG...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR TCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTTACTACGGTGCCTCCTaGGCGCACCTCATACACTAC +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVYYGAS*AHLIHY
Trigger: GTAGTGTATGAGGTGCGCTCAGGAGGCACCGTAGTA...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGTACCATATCACTGGCTaGTACGAAGAGTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMYHITG*YEESIP
Trigger: TGGAATGGACTCTTCGTATCAGCCAGTGATATGGTA...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTCAATTCCAGTCAAGTaGGTTAAGGCTACCATATCA +
Preference number: 4 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTSIPVK*VKATIS
Trigger: TGATATGGTAGCCTTAACTCACTTGACTGGAATTGA...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGCCTACATTTCAGCTGTaGCAAGCTCTGGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMPTFQL*QALGSS
Trigger: AGAAGAACCCAGAGCTTGTCACAGCTGAAATGTAGG...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACAGAGATCAATTGCTACTaGTGCTTCAAACAATGTTTG +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTEINCY*CFKQCL
Trigger: CAAACATTGTTTGAAGCATCAGTAGCAATTGATCTC...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACATATGTAATGTCTAAATaGTGCTTCAGTGACCACGTA +
Preference number: 4 (lower is better)
Translates to: TIERETTADGQVMESVPTYVMSK*CFSDHV
Trigger: TACGTGGTCACTGAAGCATCATTTAGACATTACATA...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTCAGTGGGTCCAGGGATaGGCAGAGATGACTGAGCTT +
Preference number: 4 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWAQWVQG*AEMTEL
Trigger: AAGCTCAGTCATCTCTGCTCATCCCTGGACCCACTG...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGAGGGCACCCAATTATTaGATACCCTTATCATATTGC +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLRAPNY*IPLSYC
Trigger: GCAATATGATAAGGGTATTCAATAATTGGGTGCCCT...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATGGATTAGGCAGGAATaGCTTTCCTCCAGGGGACGG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIWIRQE*LSSRGR
Trigger: CCGTCCCCTGGAGGAAAGTCATTCCTGCCTAATCCA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTCCAGACAGATTCCTaGGTGCACCCTGGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEFQTDS*VHPGSS
Trigger: GCTTGAGCCAGGGTGCACGCAGGAATCTGTCTGGAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259318.7
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAATTCCACCATTTTGCTaGAATGCCAGGATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKIPPFC*NARILL
Trigger: AAGAAGAATCCTGGCATTGCAGCAAAATGGTGGAAT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTAGCAGCAACTGTTCCTaGTGTGCCCTTCTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVSSNCS*CALLSL
Trigger: CAAAGAGAGAAGGGCACAGCAGGAACAGTTGCTGCT...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTGGTTGTCTCATTGGATaGCCCGCTGTCACTGATGTT +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVGCLIG*PAVTDV
Trigger: AACATCAGTGACAGCGGGGCATCCAATGAGACAACC...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGGGCTCTGCGTACTCTaGAAGACTTGTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVGLCVL*KTCLCL
Trigger: GAGGCAGAGACAAGTCTTGCAGAGTACGCAGAGCCC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGGGCTCTGCGTACTCTaGAAGACTTGTCTCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIGLCVL*KTCLCL
Trigger: GAGGCAGAGACAAGTCTTGCAGAGTACGCAGAGCCC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGTTGGCATAGATCCCTaGTTCCCAGCGCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIVGIDP*FPAQSQ
Trigger: CTGGCTTTGCGCTGGGAAGCAGGGATCTATGCCAAC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGTTGGCATAGATCCCTaGTTCCCAGCGCAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVVGIDP*FPAQSQ
Trigger: CTGGCTTTGCGCTGGGAAGCAGGGATCTATGCCAAC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGCAAGCTGTTGTCGCTTaGCTTCTATTTCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMQAVVA*LLFQSA
Trigger: GGCAGACTGAAATAGAAGGCAAGCGACAACAGCTTG...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCAGTTCCAGCGGGTATaGCCTGCAGCAGCCATTTCT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFQFQRV*PAAAIS
Trigger: AGAAATGGCTGCTGCAGGGCATACCCGCTGGAACTG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCTTCTCTAGGATGATTTaGTCTTTGGCAGATATCTGG +
Preference number: 4 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIFSRMI*SLADIW
Trigger: CCAGATATCTGCCAAAGAGCAAATCATCCTAGAGAA...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGTTCTCTAGGATGATTTaGTCTTTGGCAGATATCTGG +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRFSRMI*SLADIW
Trigger: CCAGATATCTGCCAAAGAGCAAATCATCCTAGAGAA...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGGGAAATGTAATTTACTaGATCTCCATCCGTACTGGA +
Preference number: 4 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLGNVIY*ISIRTG
Trigger: TCCAGTACGGATGGAGATGCAGTAAATTACATTTCC...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR GCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGGTCTCAGTTCCGCCTaGAGCAACTATGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAGLSSA*SNYVDL
Trigger: CAAATCAACATAGTTGCTGCAGGCGGAACTGAGACC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAAAGTGGAATCATAACTaGCTCTTCTGGGCAAATATG +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKKWNHN*LFWANM
Trigger: CATATTTGCCCAGAAGAGGCAGTTATGATTCCACTT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGGGCAAGGCAGGTGTTTaGTTCCAGTTCACAGTATTG +
Preference number: 4 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMGKAGV*FQFTVL
Trigger: CAATACTGTGAACTGGAAGCAAACACCTGCCTTGCC...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACTAAAAACAAAACAATaGCCTAAGAAGCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRLKTKQ*PKKLSY
Trigger: ATAGCTGAGCTTCTTAGGGCATTGTTTTGTTTTTAG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGAGCAATTTTATTCCATTaGAGCTGCTTTGATGAACTT +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRAILFH*SCFDEL
Trigger: AAGTTCATCAAAGCAGCTGCAATGGAATAAAATTGC...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGAATACAAATAACTGTGTaGTCTTGCTGTGTTGTACTA +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRIQITV*SCCVVL
Trigger: TAGTACAACACAGCAAGAGCACACAGTTATTTGTAT...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAACACCTGCAAGGTTCTaGCTCAATGCTCCTGTAATG +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLTPARF*LNAPVM
Trigger: CATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGT...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGATATATATTTCTCAAATaGACCATAGTAAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRYIFLK*TIVSGP
Trigger: GGGACCACTTACTATGGTGCATTTGAGAAATATATA...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGGCACCTTCAGGCAATTaGATAGTTCTTTCATTTTGG +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRAPSGN*IVLSFW
Trigger: CCAAAATGAAAGAACTATGCAATTGCCTGAAGGTGC...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGTGTAATTGTGACTCATaGAAATACCTTGTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: KDGANCPCAIWAAICRMWCNCDS*KYLVRS
Trigger: TGACCTAACAAGGTATTTGCATGAGTCACAATTACA...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAAGCTGTGCAATGCTGCTaGCTCCTCTGTTCTTATCCC +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQAVQCC*LLCSYP
Trigger: GGGATAAGAACAGAGGAGGCAGCAGCATTGCACAGC...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTCAGGCTCCAGGAGGGTaGCACTATAGTTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVQAPGG*HYSCLP
Trigger: AGGGAGACAACTATAGTGCCACCCTCCTGGAGCCTG...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCAGGCTCCAGGAGGGTaGCACTATAGTTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEQAPGG*HYSCLP
Trigger: AGGGAGACAACTATAGTGCCACCCTCCTGGAGCCTG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCAGGCTCCAGGAGGGTaGCACTATAGTTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFQAPGG*HYSCLP
Trigger: AGGGAGACAACTATAGTGCCACCCTCCTGGAGCCTG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAGATAGCGGATCTCTCTaGCAACATCATTATCCAGGG +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWREDSGSL*QHHYPG
Trigger: CCCTGGATAATGATGTTGCCAGAGAGATCCGCTATC...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAATTTCTGCCTCTGCCATaGGGTCAGGGCTGCTATTAC +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQFLPLP*GQGCYY
Trigger: GTAATAGCAGCCCTGACCCCATGGCAGAGGCAGAAA...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGAGCGCATCTCTAGGCTaGCTGGGGGAATGGCCATTT +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAESASLG*LGEWPF
Trigger: AAATGGCCATTCCCCCAGCCAGCCTAGAGATGCGCT...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTCCCCCGACAGAAGGTaGTCTCGGATTAGTCAGTGG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAESPDRR*SRISQW
Trigger: CCACTGACTAATCCGAGACCACCTTCTGTCGGGGGA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCTATGGCTTGTTGAATaGCATTCTGCACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTLWLVE*HSAPGG
Trigger: GCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAG...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTAGAAGACACCTGAGGTaGCTCAAACATGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTRRHLR*LKHALR
Trigger: CCTCAGAGCATGTTTGAGCCACCTCAGGTGTCTTCT...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGGGCATTCTTTGTCCTaGGGCTCTGCGTACTCTGCA +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIGHSLS*GSAYSA
Trigger: TGCAGAGTACGCAGAGCCCCAGGACAAAGAATGCCC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAACTTCTTCCTCCTGGTTaGCATAGATCCCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQLLPPG*HRSLLP
Trigger: GGGAAGCAGGGATCTATGCCAACCAGGAGGAAGAAG...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAAATTTCTTGGTTTCTTaGTCTCCCAAGCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKNFLVS*SPKHQR
Trigger: TCTTTGGTGCTTGGGAGACCAAGAAACCAAGAAATT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTCATCTCCATCCGTACTaGAGAAACCCTTCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSHLHPY*RNPSES
Trigger: ACTTTCAGAAGGGTTTCTCCAGTACGGATGGAGATG...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTCTTGATAGTCATGTCTaGGCCGGATGTTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVLDSHV*AGCFCG
Trigger: GCCACAGAAACATCCGGCCCAGACATGACTATCAAG...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAAGCTGCAAGTGACAGGTaGGAAACTGGTGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQAASDR*ETGAGK
Trigger: TTTCCCTGCACCAGTTTCCCACCTGTCACTTGCAGC...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATCTTCTGGGCAAATATaGAGAGAAACGCCATTCATT +
Preference number: 4 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKSSGQI*RETPFI
Trigger: AATGAATGGCGTTTCTCTCCATATTTGCCCAGAAGA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTCTAACATCATCCATTTaGTTTGTTTTTCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSLTSSI*FVFLFP
Trigger: GGGGAAGAGAAAAACAAACCAAATGGATGATGTTAG...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGTGCCACGGTCACTCTaGAATTTTAATACACACACA +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIVPRSL*NFNTHT
Trigger: TGTGTGTGTATTAAAATTCCAGAGTGACCGTGGCAC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCGTGCCACGGTCACTCTaGAATTTTAATACACACACA +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSVPRSL*NFNTHT
Trigger: TGTGTGTGTATTAAAATTCCAGAGTGACCGTGGCAC...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTGGGTTCCCGGAAGAATaGTCTTTCCTAGACTTATGT +
Preference number: 4 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSGFPEE*SFLDLC
Trigger: ACATAAGTCTAGGAAAGACCATTCTTCCGGGAACCC...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp GAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTAATTGTGGCTTTTTGCTTTaGGGGAGTGCTGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: ESSIFQPRPIWKHWISCNCGFLL*GSAEKV
Trigger: TACCTTCTCAGCACTCCCCCAAAGCAAAAAGCCACA...ATTACATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAACACAGATACGTGTTTaGTTGGTAGACGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLTQIRV*LVDGQK
Trigger: CTTCTGCCCGTCTACCAACCAAACACGTATCTGTGT...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCTCAGCCCAGGCATCTaGGACCTCTGGCTAGAAATC +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFLSPGI*DLWLEI
Trigger: GATTTCTAGCCAGAGGTCCCAGATGCCTGGGCTGAG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGGGTCAAGGAGACATTaGCAGATCTTGAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAGSRRH*QILRTD
Trigger: ATCAGTTCTCAAGATCTGTCAATGTCTCCTTGACCC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTAGGACTGTGGTATCCTaGGACCTCACCGACAATTCG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVRTVVS*DLTDNS
Trigger: CGAATTGTCGGTGAGGTCTCAGGATACCACAGTCCT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTAGGACTGTGGTATCCTaGGACCTCACCGACAATTCG +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFRTVVS*DLTDNS
Trigger: CGAATTGTCGGTGAGGTCTCAGGATACCACAGTCCT...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTCGGCTATGGCTTGTTaGATGGCATTCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAESAMAC*MAFCTR
Trigger: CCTGGTGCAGAATGCCATTCAACAAGCCATAGCCGA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TACAAAACCGCTCAAAACTTTGTAATTGTGACTCATGCAAATACCTTGTTAGGTACAGGAGAAGACACCTaGGGTGGCTCAAACATGCTC +
Preference number: 4 (lower is better)
Translates to: YKTAQNFVIVTHANTLLGTGEDT*GGSNML
Trigger: GAGCATGTTTGAGCCACCTCAGGTGTCTTCTCCTGT...ACCTAACAAGGTATTTGCATGAGTCACAATTACAAAGTTTTGAGCGGTTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATGTTCTGGAGGGCAGTaGTGGGGCATTCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLICSGGQ*WGILCP
Trigger: AGGACAAAGAATGCCCCATCACTGCCCTCCAGAACA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTCAGTTAGTGGTACAGTaGGGTCTACGTGAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVQLVVQ*GLREWW
Trigger: CCACCACTCACGTAGACCTCACTGTACCACTAACTG...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGTGTACACTATCATCATaGAGGGTAGTTACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMCTLSS*RVVTCC
Trigger: GCAGCAAGTAACTACCCTTCATGATGATAGTGTACA...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTTCTCACTCCACTCCTaGAGCCAGCAAACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVFSLHS*SQQTAL
Trigger: CAGAGCTGTTTGCTGGCTTCAGGAGTGGAGTGAGAA...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGCCATTTGTTCTTTCTaGCTCTGCCATGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVAICSF*LCHGVR
Trigger: CCTGACCCCATGGCAGAGGCAGAAAGAACAAATGGC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATATATTGTTCTTTCTCATaGTCGTCATCCTCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIYCSFS*SSSSKS
Trigger: GCTCTTTGAGGATGACGAGCATGAGAAAGAACAATA...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGATTCCACCATTTTGCTaGAATGCCAGGATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGIPPFC*NARILL
Trigger: AAGAAGAATCCTGGCATTGCAGCAAAATGGTGGAAT...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAGGGATTCCACCATTTTaGTGCAATGCCAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWREGIPPF*CNARIL
Trigger: AAGAATCCTGGCATTGCAGCAAAATGGTGGAATCCC...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CAAAATATTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTGTGCCCTTCTCTCTTTaGGCTCCTTGTACTTTTTGT +
Preference number: 4 (lower is better)
Translates to: QNIQETQPYKDGANCPCAVPFSL*APCTFC
Trigger: ACAAAAAGTACAAGGAGCGCAAAGAGAGAAGGGCAC...AGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAATATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGCAGAGAAATCTATCTaGTCTGTGACAATGTCCTCC +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAAEKSI*SVTMSS
Trigger: GGAGGACATTGTCACAGAGCAGATAGATTTCTCTGC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAAGGTTGTCTCATTGGATaGCCCGCTGTCACTGATGTT +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQGCLIG*PAVTDV
Trigger: AACATCAGTGACAGCGGGGCATCCAATGAGACAACC...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGCTCTGCTCCATCCCTaGTGGTTTTGGACACAGCTT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIALLHP*WFWTQL
Trigger: AAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAAGGTCCCTGTTGCTCTaGTCCATCCCTGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIRSLLL*SIPAGF
Trigger: AAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTAGGTCCCTGTTGCTCTaGTCCATCCCTGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFRSLLL*SIPAGF
Trigger: AAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCT...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGCTTCTCAGCTCAGCTaGCTCCGAGTACTTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVASQLS*LRVLAE
Trigger: TTCAGCAAGTACTCGGAGGCAGCTGAGCTGAGAAGC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTCTTCCATGAGGGTCTaGATCAGATTCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVSSMRV*IRFLGR
Trigger: GCGGCCCAAGAATCTGATGCAGACCCTCATGGAAGA...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATCTTCCATGAGGGTCTaGATCAGATTCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLISSMRV*IRFLGR
Trigger: GCGGCCCAAGAATCTGATGCAGACCCTCATGGAAGA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAACCAGCGCAAAGCCAGTaGGCTCTTTCTTCGATTAAC +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQPAQSQ*ALSSIN
Trigger: GTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTGG...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTGCAGCCTTTCCTTGTaGAATTCCGCCTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAECSLSL*NSASAI
Trigger: GATGGCAGAGGCGGAATTGCACAAGGAAAGGCTGCA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTTGCAGCCTTTCCTTGTaGAATTCCGCCTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPCSLSL*NSASAI
Trigger: GATGGCAGAGGCGGAATTGCACAAGGAAAGGCTGCA...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGTTCTCTAGGATGATTTaGTCTTTGGCAGATATCTGG +
Preference number: 4 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGFSRMI*SLADIW
Trigger: CCAGATATCTGCCAAAGAGCAAATCATCCTAGAGAA...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR GCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCGGAAATGTAATTTACTaGATCTCCATCCGTACTGGA +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSGNVIY*ISIRTG
Trigger: TCCAGTACGGATGGAGATGCAGTAAATTACATTTCC...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTCAGGGAAATATCCTGTaGCATGTAGGCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVQGNIL*HVGCTS
Trigger: GCTGGTGCAGCCTACATGGCACAGGATATTTCCCTG...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACAGGTGGGAAACTGGTaGAGGGAAATATCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIQVGNW*REISCA
Trigger: GGCACAGGATATTTCCCTGCACCAGTTTCCCACCTG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCAAGTGGAATCATAACTaGCTCTTCTGGGCAAATATG +
Preference number: 4 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSKWNHN*LFWANM
Trigger: CATATTTGCCCAGAAGAGGCAGTTATGATTCCACTT...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGAGAAGCTCAGCTATGTaGCACTTAATATTTGTTATG +
Preference number: 4 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQRSSAM*HLIFVM
Trigger: CATAACAAATATTAAGTGGCACATAGCTGAGCTTCT...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAACATATGTGGCTTTTTaGTTTGGGGGAGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLTYVAF*FGGVLR
Trigger: TCTCAGCACTCCCCCAAAGCAAAAAGCCACATATGT...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATAGGGTAGTTACTTGCTaGTATAGGTGGGATTATAGG +
Preference number: 4 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDRVVTC*YRWDYR
Trigger: CCTATAATCCCACCTATAGCAGCAAGTAACTACCCT...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGAATTTACAGAGAGAATaGCAATGGCAGCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMNLQRE*QWQQER
Trigger: CCTTTCCTGCTGCCATTGGCATTCTCTCTGTAAATT...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTCGCGGACTTCCAAAGTaGCGAGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVRGLPK*RDYRCE
Trigger: CTCACACCTGTAATCTCGGCACTTTGGAAGTCCGCG...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCATAACTGTGTGCTCTTaGTGTGTTGTACTATCCAAT +
Preference number: 4 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIITVCS*CVVLSN
Trigger: ATTGGATAGTACAACACAGCAAGAGCACACAGTTAT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGACACAGATACATATCTaGATTGTGCTCCTAATAAAC +
Preference number: 4 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQTQIHI*IVLLIN
Trigger: GTTTATTAGGAGCACAATGCAGATATGTATCTGTGT...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGTCTTTAAGCAATAAGTaGTCTGGTTCAATCAACTGT +
Preference number: 4 (lower is better)
Translates to: PYKDGANCPCAIWAAICRSLSNK*SGSINC
Trigger: ACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGA...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTCCTGCGTGCACCCTaGCTCAAGCTGGACAAATTC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEFLRAP*LKLDKF
Trigger: GAATTTGTCCAGCTTGAGCCAGGGTGCACGCAGGAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259318.7
CDS-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCATGTTTTTGTGATCTaGGGAAAGAGAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTHVFVI*GKRAGS
Trigger: GCTGCCAGCTCTCTTTCCCCAGATCACAAAAACATG...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTATGGTCCATGGGATGTaGGGTAGAGGTGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFMVHGM*GRGDSR
Trigger: CCTGGAATCACCTCTACCCCACATCCCATGGACCAT...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTCACTGCACCAGGCTCTaGGGAGGATGTTCCATTGTA +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVHCTRL*GGCSIV
Trigger: TACAATGGAACATCCTCCCCAGAGCCTGGTGCAGTG...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCACTGCACCAGGCTCTaGGGAGGATGTTCCATTGTA +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEHCTRL*GGCSIV
Trigger: TACAATGGAACATCCTCCCCAGAGCCTGGTGCAGTG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCTGCCTCTGCCATaGGGTCAGGGCTGCTATTAC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEFLPLP*GQGCYY
Trigger: GTAATAGCAGCCCTGACCCCATGGCAGAGGCAGAAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAAAGAAGACACCTGAGGTaGCTCAAACATGCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQRRHLR*LKHALR
Trigger: CCTCAGAGCATGTTTGAGCCACCTCAGGTGTCTTCT...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAATCTCCCGAAGCACTTTaGACTTGGAATGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQSPEAL*TWNAAA
Trigger: TGCTGCAGCATTCCAAGTCCAAAGTGCTTCGGGAGA...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR CCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTTCATCCTCAGAAAGCTaGGGAGGCTTCTTGATAGTC +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTSSSES*GGFLIV
Trigger: GACTATCAAGAAGCCTCCCCAGCTTTCTGAGGATGA...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATAGGAGAAGAAAGAAGTaGTCACATGACAACACAGCA +
Preference number: 4 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDRRRKK*SHDNTA
Trigger: TGCTGTGTTGTCATGTGACCACTTCTTTCTTCTCCT...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAGAGAAACCAGAGACATaGCAGTGTGTGACTACGTTA +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLEKPET*QCVTTL
Trigger: TAACGTAGTCACACACTGCCATGTCTCTGGTTTCTC...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGCACCTTCATTTAGTGTaGCTACAAATAGCTCGAATA +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRHLHLV*LQIARI
Trigger: TATTCGAGCTATTTGTAGCCACACTAAATGAAGGTG...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
3UTR CAA 72 bp AATTTTGCAGGCTTATATGAGAACACAGATACGTGTTaGGTTGGTAGACGGGCAGAAGTAAATCCCAACCTA +
Preference number: 4 (lower is better)
Translates to: NFAGLYENTDTC*VGRRAEVNPNL
Trigger: TAGGTTGGGATTTACTTCTGCCCGTCTACCAACCAAACACGTATCTGTGTTCTCATATAAGCCTGCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR CAA 72 bp TTCAATTATTGCCGCTCTAAAAATGCCCCCACCATCTaGAACCAAGTTGTTCAACGCGTACAGATTCTATAC +
Preference number: 4 (lower is better)
Translates to: FNYCRSKNAPTI*NQVVQRVQILY
Trigger: GTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCAATAATTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR CAA 72 bp TATGTGGACATTGATCTATATACGGCTTATATGTCATaGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAG +
Preference number: 4 (lower is better)
Translates to: YVDIDLYTAYMS*SRVSSMHGYEE
Trigger: CTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACATATAAGCCGTATATAGATCAATGTCCACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTCCAGGGATTCGTGGTaGTCAGTAAGGAGGCCATTA +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFSRDSW*SVRRPL
Trigger: TAATGGCCTCCTTACTGATCACCACGAATCCCTGGA...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATCCAGGGATTCGTGGTaGTCAGTAAGGAGGCCATTA +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLISRDSW*SVRRPL
Trigger: TAATGGCCTCCTTACTGATCACCACGAATCCCTGGA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CAAAATATTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTAATCTATCTGCTCTGTaGCAATGTCCTCCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: QNIQETQPYKDGANCPCANLSAL*QCPPLL
Trigger: AAGCAAAGGAGGACATTGTCACAGAGCAGATAGATT...AGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAATATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCATTCTTTGTATCATCCTaGAACACACTGGTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNAFFVSS*NTLVAQ
Trigger: CTGAGCAACCAGTGTGTTTCAGGATGATACAAAGAA...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTGTCTTCTCCCTCAATaGCTTCTCATCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMCLLPQ*LLIIFI
Trigger: GATGAAGATGATGAGAAGTCATTGAGGGAGAAGACA...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTAAGAGAGACAACCGCTaGTGGGCAGGTTATGGAATC +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPKRDNR*WAGYGI
Trigger: GATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTT...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGAAACCAAGCCTTGGATaGAATAATCTTCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMKPSLG*NNLQQQ
Trigger: CTGCTGTTGAAGATTATTTCATCCAAGGCTTGGTTT...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTCTGAATTCCCCATTATaGCAAGAAAATGATGGGACA +
Preference number: 4 (lower is better)
Translates to: SLTPSEMLKLKISPTTYILNSPL*QENDGT
Trigger: TGTCCCATCATTTTCTTGTCATAATGGGGAATTCAG...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGCTGAATTCCCCATTATaGCAAGAAAATGATGGGACA +
Preference number: 4 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMLNSPL*QENDGT
Trigger: TGTCCCATCATTTTCTTGTCATAATGGGGAATTCAG...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTGGCAAAAATGCAATGTaGAATGGCTCACTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSGKNAM*NGSLWN
Trigger: ATTCCAAAGTGAGCCATTTCACATTGCATTTTTGCC...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAGTGGTGAGTAGTTTCTaGGACATGACAACTCTGTTA +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLVVSSF*DMTTLL
Trigger: TAACAGAGTTGTCATGTCTCAGAAACTACTCACCAC...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAAAATTGGCAGCTCACTaGATGCTTAAAATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIKLAAH*MLKIQE
Trigger: TTCCTGAATTTTAAGCATTCAGTGAGCTGCCAATTT...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTGGGATTCCACCATTTTaGTGCAATGCCAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVGIPPF*CNARIL
Trigger: AAGAATCCTGGCATTGCAGCAAAATGGTGGAATCCC...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTAGCAGCAACTGTTCCTaGTGTGCCCTTCTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVSSNCS*CALLSL
Trigger: CAAAGAGAGAAGGGCACAGCAGGAACAGTTGCTGCT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGAGCAGCAACTGTTCCTaGTGTGCCCTTCTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAESSNCS*CALLSL
Trigger: CAAAGAGAGAAGGGCACAGCAGGAACAGTTGCTGCT...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTGCTGTAACTGCTTCTaGAGCAGCAACTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAECCNCF*SSNCSC
Trigger: GCAGGAACAGTTGCTGCTGCAGAAGCAGTTACAGCA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATTTGTCCTGGGGCTCTaGGTACTCTGCAAGACTTGT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIFVLGL*VLCKTC
Trigger: ACAAGTCTTGCAGAGTACGCAGAGCCCCAGGACAAA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTCCTGGGGCTCTaGGTACTCTGCAAGACTTGT +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEFVLGL*VLCKTC
Trigger: ACAAGTCTTGCAGAGTACGCAGAGCCCCAGGACAAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTCCAGCGCAAAGCCAGTaGGCTCTTTCTTCGATTAAC +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVPAQSQ*ALSSIN
Trigger: GTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTGG...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTATTTTCTGCTATGGCTTaGAGCCTTTCCTTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLFSAMA*SLSLCN
Trigger: ATTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAA...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAATGTTATCTTCAAGTTaGTTGACTCTGAACTCATCC +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILIMLSSS*LTLNSS
Trigger: GGATGAGTTCAGAGTCAAGCAACTTGAAGATAACAT...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTACCTGTACACCCAAGTaGCACGGTCACTCTGGAATT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFTCTPK*HGHSGI
Trigger: AATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGT...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTCATTTTCTACTACGGTaGCTCCTGAGCGCACCTCAT +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVHFLLR*LLSAPH
Trigger: ATGAGGTGCGCTCAGGAGGCACCGTAGTAGAAAATG...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTGCTGAGGCTCCCATCTaGAATCACAGTCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPAEAPI*NHSPFR
Trigger: TCTGAAAGGACTGTGATTGCAGATGGGAGCCTCAGC...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGGCAATTTTATTCCATTaGAGCTGCTTTGATGAACTT +
Preference number: 4 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRAILFH*SCFDEL
Trigger: AAGTTCATCAAAGCAGCTGCAATGGAATAAAATTGC...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTAAGCAATGCCAACTGTaGTTAAAAATATGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SLTPSEMLKLKISPTTYIKQCQL*LKICSQ
Trigger: CTGGGAGCATATTTTTAAGCACAGTTGGCATTGCTT...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATGCCAATTGCCCATGTaGTATTTGGGCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLICQLPM*YLGCHL
Trigger: CAGATGGCAGCCCAAATAGCACATGGGCAATTGGCA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGTTAACAAGCTTGTGTaGTATTTGGGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVVNKLV*YLGVGL
Trigger: CAGCCCCACCCCCAAATAGCACACAAGCTTGTTAAC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCACGCAGCTCAAACTTaGCCTCCTTTTTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFHAAQT*PPFSVW
Trigger: CCACACTGAAAAAGGAGGCCAAGTTTGAGCTGCGTG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATTTCCTGGAGGGCATTaGTTGTCTCATTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIFPGGH*LSHWMP
Trigger: GGGCATCCAATGAGACAACCAATGCCCTCCAGGAAA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCCTGGAGGGCATTaGTTGTCTCATTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEFPGGH*LSHWMP
Trigger: GGGCATCCAATGAGACAACCAATGCCCTCCAGGAAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACTATGGCTTGTTGAATaGCATTCTGCACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLILWLVE*HSAPGG
Trigger: GCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCTATGGCTTGTTGAATaGCATTCTGCACCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAELWLVE*HSAPGG
Trigger: GCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCCACCTGCTCGGCTATaGCTTGTTGAATGGCATTCT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFPPARL*LVEWHS
Trigger: AGAATGCCATTCAACAAGCCATAGCCGAGCAGGTGG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTTCAGTGGTGGGGGATaGAGGAGGTTTGACTTTCTC +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVFSGGG*RRFDFL
Trigger: GAGAAAGTCAAACCTCCTCCATCCCCCACCACTGAA...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTCAGTGGTGGGGGATaGAGGAGGTTTGACTTTCTC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEFSGGG*RRFDFL
Trigger: GAGAAAGTCAAACCTCCTCCATCCCCCACCACTGAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGGATCCATTGTAGATTaGCCCCAAACCAGACACTGG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVGSIVD*PQTRHW
Trigger: CCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TACAAAACCGCTCAAAACTTTGTAATTGTGACTCATGCAAATACCTTGTTAGGTGGATCCATTGTAGATTaGCCCCAAACCAGACACTGG +
Preference number: 4 (lower is better)
Translates to: YKTAQNFVIVTHANTLLGGSIVD*PQTRHW
Trigger: CCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCC...ACCTAACAAGGTATTTGCATGAGTCACAATTACAAAGTTTTGAGCGGTTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTTCTCCCGAAGCACTTTaGACTTGGAATGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVSPEAL*TWNAAA
Trigger: TGCTGCAGCATTCCAAGTCCAAAGTGCTTCGGGAGA...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGCCAGCAAACAGCTCTaGAGGAATTACCTGTACACC +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVASKQL*RNYLYT
Trigger: GGTGTACAGGTAATTCCTCCAGAGCTGTTTGCTGGC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGCCAGCAAACAGCTCTaGAGGAATTACCTGTACACC +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFASKQL*RNYLYT
Trigger: GGTGTACAGGTAATTCCTCCAGAGCTGTTTGCTGGC...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTAATAGGAGAAGAAAGAAGTaGTCACATGACAACACAGCA +
Preference number: 4 (lower is better)
Translates to: ESSIFQPRPIWKHWISCNRRRKK*SHDNTA
Trigger: TGCTGTGTTGTCATGTGACCACTTCTTTCTTCTCCT...ATTACATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTCTGGTCTTGAACTTCTaGGCTCACACTATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWALVLNF*AHTILL
Trigger: CAGGAGGATAGTGTGAGCCCAGAAGTTCAAGACCAG...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCTCCAGCATCTCCTCTaGAGGCCTCACTTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFLQHLL*RPHFSN
Trigger: ATTAGAAAAGTGAGGCCTTCAGAGGAGATGCTGGAG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAACCATGATCACTAAATaGCTTGGAGACGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLITMITK*LGDAFS
Trigger: GGAGAAGGCGTCTCCAAGTCATTTAGTGATCATGGT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGGGATGGAGGAGGTTTaGCTTTCTCTATTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEGMEEV*LSLFSL
Trigger: CAGGGAAAATAGAGAAAGTCAAACCTCCTCCATCCC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTCGAGCAGGAAGGAAGTaGTTCACTCTTGAAGACACA +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVRAGRK*FTLEDT
Trigger: TGTGTCTTCAAGAGTGAATCACTTCCTTCCTGCTCG...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp GAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTAATAAACCAAGCCTTGGATaGAATAATCTTCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: ESSIFQPRPIWKHWISCNKPSLG*NNLQQQ
Trigger: CTGCTGTTGAAGATTATTTCATCCAAGGCTTGGTTT...ATTACATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTATGTGGTCCCTTGAAATaGAATTCTGCAGGAAGTAAA +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLCGPLK*NSAGSK
Trigger: TTTACTTCCTGCAGAATTTCATTTCAAGGGACCACA...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAAACACTTTTACATTCTaGAACAGACACCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: SGGITCTPKCHGHSGILINTFTF*NRHLNF
Trigger: GAAATTGAGGTGTCTGTTGCAGAATGTAAAAGTGTT...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAATTCCACCATTTTGCTaGAATGCCAGGATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWREIPPFC*NARILL
Trigger: AAGAAGAATCCTGGCATTGCAGCAAAATGGTGGAAT...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCATCAGCTGAAATTGTTTaGGAGCAGCAGAGAAATCTA +
Preference number: 4 (lower is better)
Translates to: MERNAIHFMAAGENGVNASAEIV*EQQRNL
Trigger: TAGATTTCTCTGCTGCTCGCAAACAATTTCAGCTGA...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCAAGCTGTTGTCGCTTaGCTTCTATTTCAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFQAVVA*LLFQSA
Trigger: GGCAGACTGAAATAGAAGGCAAGCGACAACAGCTTG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTTTGGACTTGGAATGCTaGAGCAGAAGTATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVLDLEC*SRSICS
Trigger: CGAGCAGATACTTCTGCTGCAGCATTCCAAGTCCAA...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATTGGACTTGGAATGCTaGAGCAGAAGTATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLILDLEC*SRSICS
Trigger: CGAGCAGATACTTCTGCTGCAGCATTCCAAGTCCAA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGATGTTATCTTCAAGTTaGTTGACTCTGAACTCATCC +
Preference number: 4 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMMLSSS*LTLNSS
Trigger: GGATGAGTTCAGAGTCAAGCAACTTGAAGATAACAT...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGGTCTCAGTTCCGCCTaGAGCAACTATGTTGATTTG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVGLSSA*SNYVDL
Trigger: CAAATCAACATAGTTGCTGCAGGCGGAACTGAGACC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTAATTGCATGTGGCAAAAATaGAATGTGAAATGGCTCACT +
Preference number: 4 (lower is better)
Translates to: ESSIFQPRPIWKHWISCNCMWQK*NVKWLT
Trigger: AGTGAGCCATTTCACATTGCATTTTTGCCACATGCA...ATTACATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAAATCAAGTTCTTTTGTaGGACAGTTCCGACCTTCTT +
Preference number: 4 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLNQVLL*DSSDLL
Trigger: AAGAAGGTCGGAACTGTCGCACAAAAGAACTTGATT...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTTTGATGCAGAAAGTCTaGAGTCCCCAAAATTACATA +
Preference number: 4 (lower is better)
Translates to: SLTPSEMLKLKISPTTYILMQKV*SPQNYI
Trigger: TATGTAATTTTGGGGACTGCAGACTTTCTGCATCAA...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGAAGGTTCTGCCTCAATaGTCCTGTAATGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMKVLPQ*SCNEIH
Trigger: GTGAATTTCATTACAGGAGCATTGAGGCAGAACCTT...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTATCCAGTTGGGGGTCTaGAAGTTTCCTTCTCTCACA +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPIQLGV*KFPSLT
Trigger: TGTGAGAGAAGGAAACTTGCAGACCCCCAACTGGAT...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCATGTTTTTGTGATCTaGGGAAAGAGAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFHVFVI*GKRAGS
Trigger: GCTGCCAGCTCTCTTTCCCCAGATCACAAAAACATG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTCATGTTTTTGTGATCTaGGGAAAGAGAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVHVFVI*GKRAGS
Trigger: GCTGCCAGCTCTCTTTCCCCAGATCACAAAAACATG...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGATAGCGGATCTCTCTaGCAACATCATTATCCAGGG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIDSGSL*QHHYPG
Trigger: CCCTGGATAATGATGTTGCCAGAGAGATCCGCTATC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGATAGCGGATCTCTCTaGCAACATCATTATCCAGGG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEDSGSL*QHHYPG
Trigger: CCCTGGATAATGATGTTGCCAGAGAGATCCGCTATC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCAGAATCACAGCAGTTaGCCTCTAGCACCTCATCTA +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEQNHSS*PLAPHL
Trigger: TAGATGAGGTGCTAGAGGCCAACTGCTGTGATTCTG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACAGAATCACAGCAGTTaGCCTCTAGCACCTCATCTA +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIQNHSS*PLAPHL
Trigger: TAGATGAGGTGCTAGAGGCCAACTGCTGTGATTCTG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCATCCTCAAAGAGCTTaGAGGGCTTCTTGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFHPQRA*RASCPH
Trigger: ATGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGAGTCAAGCTCCTCTTaGGTCAAGGAGACATTGACA +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFESSSS*VKETLT
Trigger: TGTCAATGTCTCCTTGACCCAAGAGGAGCTTGACTC...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGCCAGTGAATTTTCCTaGAGGGCATTGGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIASEFS*RALVVS
Trigger: TGAGACAACCAATGCCCTCCAGGAAAATTCACTGGC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGCCAGTGAATTTTCCTaGAGGGCATTGGTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFASEFS*RALVVS
Trigger: TGAGACAACCAATGCCCTCCAGGAAAATTCACTGGC...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACTGCTCCATCCCTGCTaGTTTTGGACACAGCTTTAT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLILLHPC*FWTQLY
Trigger: ATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTGTAGCATGTTCTaGAGGGCAGTGATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEFCSMF*RAVMGH
Trigger: ATGCCCCATCACTGCCCTCCAGAACATGCTACAAAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATTTTGTAGCATGTTCTaGAGGGCAGTGATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIFCSMF*RAVMGH
Trigger: ATGCCCCATCACTGCCCTCCAGAACATGCTACAAAA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CAAAATATTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTAATTTCTTGGTTTCTTaGTCTCCCAAGCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: QNIQETQPYKDGANCPCANFLVS*SPKHQR
Trigger: TCTTTGGTGCTTGGGAGACCAAGAAACCAAGAAATT...AGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAATATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAAATTTCTTGGTTTCTTaGTCTCCCAAGCACCAAAGA +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWRENFLVS*SPKHQR
Trigger: TCTTTGGTGCTTGGGAGACCAAGAAACCAAGAAATT...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAAGAAGCACTTTGGACTTaGAATGCTGCAGCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQEALWT*NAAAEV
Trigger: TACTTCTGCTGCAGCATTCCAAGTCCAAAGTGCTTC...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR CCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAATCTTCTGGGCAAATATaGAGAGAAACGCCATTCATT +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWRESSGQI*RETPFI
Trigger: AATGAATGGCGTTTCTCTCCATATTTGCCCAGAAGA...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CAAAATATTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTCATCCTGAAACACACTaGTTGCTCAGCAAAAATAGT +
Preference number: 4 (lower is better)
Translates to: QNIQETQPYKDGANCPCAHPETH*LLSKNS
Trigger: ACTATTTTTGCTGAGCAACCAGTGTGTTTCAGGATG...AGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAATATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTAACCCCCAGTGCCAATaGGTTCAATTCCAGTCAAGT +
Preference number: 4 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWANPQCQ*VQFQSS
Trigger: ACTTGACTGGAATTGAACCCATTGGCACTGGGGGTT...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTTGTGGCTTTTTGCTTTaGGGGAGTGCTGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVCGFLL*GSAEKV
Trigger: TACCTTCTCAGCACTCCCCCAAAGCAAAAAGCCACA...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGATGCACCATAGTAAGTaGTCCCTTAACCTCAAATGT +
Preference number: 4 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMMHHSK*SLNLKC
Trigger: ACATTTGAGGTTAAGGGACCACTTACTATGGTGCAT...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTTCAGGCATTGCCTGGTaGCCTCTGTGTATATCAAGA +
Preference number: 4 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWASGIAW*PLCISR
Trigger: TCTTGATATACACAGAGGCCACCAGGCAATGCCTGA...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGGGTCAAGGAGACATTaGCAGATCTTGAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFGSRRH*QILRTD
Trigger: ATCAGTTCTCAAGATCTGTCAATGTCTCCTTGACCC...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGGGTCAAGGAGACATTaGCAGATCTTGAGAACTGAT +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVGSRRH*QILRTD
Trigger: ATCAGTTCTCAAGATCTGTCAATGTCTCCTTGACCC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTCTCATAGTCTTCCATaGGGGTCTGCATCAGATTCT +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVSHSLP*GSASDS
Trigger: AGAATCTGATGCAGACCCTCATGGAAGACTATGAGA...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGAAGTCCTTTCTCTTTTaGTTCCTGGGTGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEKSFLF*FLGVQS
Trigger: ACTCTGGACACCCAGGAATCAAAAGAGAAAGGACTT...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTAAGTCCTTTCTCTTTTaGTTCCTGGGTGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFKSFLF*FLGVQS
Trigger: ACTCTGGACACCCAGGAATCAAAAGAGAAAGGACTT...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTCTTGCTCCAGCCTCTaGATGTTATCTTCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFSCSSL*MLSSSC
Trigger: GCAACTTGAAGATAACATTCAGAGGCTGGAGCAAGA...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR TCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTCATCATCATAGACTTTaGCTCCTTTCTGATGGACCC +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPHHHRL*LLSDGP
Trigger: GGGTCCATCAGAAAGGAGTCAAAGTCTATGATGATG...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTGATTGTCCAGCCTTCTaGATAAGCTCTTCTACATCC +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPDCPAF*ISSSTS
Trigger: GGATGTAGAAGAGCTTATTCAGAAGGCTGGACAATC...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTCAACTGGGGAGGAGATaGACAGTTAATGCATTACAG +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPQLGRR*TVNALQ
Trigger: CTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTG...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTGGGACTTCAGGAATTTaGCAGAAACTTGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPGTSGI*QKLGGK
Trigger: TTTTCCCCCAAGTTTCTGTCAAATTCCTGAAGTCCC...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAATCCCTCACTATAAAATaGATTTCTTGCAACAGGGAT +
Preference number: 4 (lower is better)
Translates to: KCRRSGIITASSGQIWRESLTIK*ISCNRD
Trigger: ATCCCTGTTGCAAGAAATTCATTTTATAGTGAGGGA...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTTATTGTTCTTTCTCATaGTCGTCATCCTCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVYCSFS*SSSSKS
Trigger: GCTCTTTGAGGATGACGAGCATGAGAAAGAACAATA...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGGGATTCCACCATTTTaGTGCAATGCCAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFGIPPF*CNARIL
Trigger: AAGAATCCTGGCATTGCAGCAAAATGGTGGAATCCC...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGGGATTCCACCATTTTaGTGCAATGCCAGGATTCTT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIGIPPF*CNARIL
Trigger: AAGAATCCTGGCATTGCAGCAAAATGGTGGAATCCC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATTTGTCAATCATGCTTaGGCGTTCATGAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIFVNHA*AFMRRG
Trigger: GCCTCTTCTCATGAACGCGCAAGCATGATTGACAAA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TACAAAACCGCTCAAAACTTTGTAATTGTGACTCATGCAAATACCTTGTTAGGTTTTGTCAATCATGCTTaGGCGTTCATGAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: YKTAQNFVIVTHANTLLGFVNHA*AFMRRG
Trigger: GCCTCTTCTCATGAACGCGCAAGCATGATTGACAAA...ACCTAACAAGGTATTTGCATGAGTCACAATTACAAAGTTTTGAGCGGTTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTACTTTGGACTTGGAATaGTGCAGCAGAAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWATLDLE*CSRSIC
Trigger: GCAGATACTTCTGCTGCAGCATTCCAAGTCCAAAGT...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGAGGTGTGTGCCACCATaGTGGCTAATTTTTATATTT +
Preference number: 4 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMRCVPP*WLIFIF
Trigger: AAATATAAAAATTAGCCAGCATGGTGGCACACACCT...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTAGAACTCTTCCCACCTaGCAGAATAGGATATCACAG +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVRTLPT*QNRISQ
Trigger: CTGTGATATCCTATTCTGGCAGGTGGGAAGAGTTCT...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTATAAACACGGCAGAATaGAATACTTCCAGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTINTAE*NTSRKA
Trigger: AGCCTTTCTGGAAGTATTGCATTCTGCCGTGTTTAT...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTCTCTTCCTCAATCATaGACAAAGTCCGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAESLPQS*TKSAVS
Trigger: GGAAACAGCGGACTTTGTCCATGATTGAGGAAGAGA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCATCTCCATCCGTACTaGAGAAACCCTTCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFHLHPY*RNPSES
Trigger: ACTTTCAGAAGGGTTTCTCCAGTACGGATGGAGATG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTGGGTTCCCGGAAGAATaGTCTTTCCTAGACTTATGT +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPGFPEE*SFLDLC
Trigger: ACATAAGTCTAGGAAAGACCATTCTTCCGGGAACCC...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTAGGCTACCATATCACTaGCTGATACGAAGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWARLPYH*LIRRVH
Trigger: ATGGACTCTTCGTATCAGCCAGTGATATGGTAGCCT...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTACTTGCTGCTATAGGTaGGATTATAGGTCTCATCCC +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPTCCYR*DYRSHP
Trigger: GGGATGAGACCTATAATCCCACCTATAGCAGCAAGT...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTAGGGTCTTGATCTCTTaGGTAGTAGAAAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVRVLIS*VVEKGL
Trigger: GAGGCCTTTTTCTACTACCCAAGAGATCAAGACCCT...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
3UTR CAA 72 bp GATGCTTATTCTGTCTATGTCCATCTGCGTTTTATATaGGCAGGGCTAATATTTCTTACAAAGGAAGACCTG +
Preference number: 4 (lower is better)
Translates to: DAYSVYVHLRFI*AGLIFLTKEDL
Trigger: CAGGTCTTCCTTTGTAAGAAATATTAGCCCTGCCAATATAAAACGCAGATGGACATAGACAGAATAAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGATTTCCATGTTTTTGTaGTCTGGGGAAAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEISMFL*SGEREL
Trigger: CAGCTCTCTTTCCCCAGATCACAAAAACATGGAAAT...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTATTTCCATGTTTTTGTaGTCTGGGGAAAGAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVISMFL*SGEREL
Trigger: CAGCTCTCTTTCCCCAGATCACAAAAACATGGAAAT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCTGCAGCAACTATGTTaGTTTGCTTGTAACATGTTT +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTLQQLC*FACNMF
Trigger: AAACATGTTACAAGCAAATCAACATAGTTGCTGCAG...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTCTTTGTATCATCCTaGAACACACTGGTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEFFVSS*NTLVAQ
Trigger: CTGAGCAACCAGTGTGTTTCAGGATGATACAAAGAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTTGTACACTATCATCATaGAGGGTAGTTACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVCTLSS*RVVTCC
Trigger: GCAGCAAGTAACTACCCTTCATGATGATAGTGTACA...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTAAATTGGCAGCTCACTaGATGCTTAAAATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTKLAAH*MLKIQE
Trigger: TTCCTGAATTTTAAGCATTCAGTGAGCTGCCAATTT...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTGCTTTGTCAATCATaGTTGCGCGTTCATGAGAAG +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAELLCQS*LRVHEK
Trigger: CTTCTCATGAACGCGCAAGCATGATTGACAAAGCAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGACAATGTCCTCCTTTaGTTTGTCAATCATGCTTGC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIDNVLL*FVNHAC
Trigger: GCAAGCATGATTGACAAAGCAAAGGAGGACATTGTC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGACAATGTCCTCCTTTaGTTTGTCAATCATGCTTGC +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFDNVLL*FVNHAC
Trigger: GCAAGCATGATTGACAAAGCAAAGGAGGACATTGTC...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAATCAGCTGAAATTGTTTaGGAGCAGCAGAGAAATCTA +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQSAEIV*EQQRNL
Trigger: TAGATTTCTCTGCTGCTCGCAAACAATTTCAGCTGA...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTCTGCTATGGCTTaGAGCCTTTCCTTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEFSAMA*SLSLCN
Trigger: ATTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATTTTCTGCTATGGCTTaGAGCCTTTCCTTGTGCAAT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIFSAMA*SLSLCN
Trigger: ATTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR GCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTTCAAAGCAATTCAACTaGAAGGCAAGGCAGGTGTTT +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVSKQFN*KARQVF
Trigger: AAACACCTGCCTTGCCTTGCAGTTGAATTGCTTTGA...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTAATTTACAGAGAGAATaGCAATGGCAGCAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPNLQRE*QWQQER
Trigger: CCTTTCCTGCTGCCATTGGCATTCTCTCTGTAAATT...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTACTGCATCAGCTCGGTaGCTTTATATCCCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVTASAR*LYIPFH
Trigger: ATGAAAAGGGATATAAAGGCACCGAGCTGATGCAGT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAACCAAAGACGCTTCCTaGGTTGAAGGAAGTTTATTC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLITKDAS*VEGSLF
Trigger: GAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TACAAAACCGCTCAAAACTTTGTAATTGTGACTCATGCAAATACCTTGTTAGGTACCAAAGACGCTTCCTaGGTTGAAGGAAGTTTATTC +
Preference number: 4 (lower is better)
Translates to: YKTAQNFVIVTHANTLLGTKDAS*VEGSLF
Trigger: GAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGT...ACCTAACAAGGTATTTGCATGAGTCACAATTACAAAGTTTTGAGCGGTTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTACCAAAGACGCTTCCTaGGTTGAAGGAAGTTTATTC +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVTKDAS*VEGSLF
Trigger: GAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTCTAACATCATCCATTTaGTTTGTTTTTCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RVQILYVYILPHPIIKIVLTSSI*FVFLFP
Trigger: GGGGAAGAGAAAAACAAACCAAATGGATGATGTTAG...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTGGCTTTGTAATCAACTaGGGAGGAGATGAACAGTTA +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVGFVIN*GGDEQL
Trigger: TAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCC...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTTCAGTTTCTCTAGGATaGTTTGCTCTTTGGCAGATA +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVSVSLG*FALWQI
Trigger: TATCTGCCAAAGAGCAAATCATCCTAGAGAAACTGA...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTCGTGTTTCCTTTCTaGTTGATCCAAAAGGAATCC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEFVFPF*LIQKES
Trigger: GGATTCCTTTTGGATCAATCAGAAAGGAAACACGAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATTTAGGATTTGTAGCTaGTTCCAAGCCTGCACTTAT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIFRICS*FQACTY
Trigger: ATAAGTGCAGGCTTGGAATCAGCTACAAATCCTAAA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR TCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTTCAATTCCAGTCAAGTaGGTTAAGGCTACCATATCA +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPSIPVK*VKATIS
Trigger: TGATATGGTAGCCTTAACTCACTTGACTGGAATTGA...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTACTGTATACTTGCATTaGATGCCTCACAATCACTCT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFTVYLH*MPHNHS
Trigger: AGAGTGATTGTGAGGCATTCAATGCAAGTATACAGT...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR TCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTACTGTATACTTGCATTaGATGCCTCACAATCACTCT +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVTVYLH*MPHNHS
Trigger: AGAGTGATTGTGAGGCATTCAATGCAAGTATACAGT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTATTGTTCTTTCTCATaGTCGTCATCCTCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEYCSFS*SSSSKS
Trigger: GCTCTTTGAGGATGACGAGCATGAGAAAGAACAATA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTATTGTTCTTTCTCATaGTCGTCATCCTCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVYCSFS*SSSSKS
Trigger: GCTCTTTGAGGATGACGAGCATGAGAAAGAACAATA...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTCAGCTGAAATTGTTTaGGAGCAGCAGAGAAATCTA +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVSAEIV*EQQRNL
Trigger: TAGATTTCTCTGCTGCTCGCAAACAATTTCAGCTGA...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATCAGCTGAAATTGTTTaGGAGCAGCAGAGAAATCTA +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLISAEIV*EQQRNL
Trigger: TAGATTTCTCTGCTGCTCGCAAACAATTTCAGCTGA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTAAGTGGAATCATAACTaGCTCTTCTGGGCAAATATG +
Preference number: 4 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVKWNHN*LFWANM
Trigger: CATATTTGCCCAGAAGAGGCAGTTATGATTCCACTT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAAAGTGGAATCATAACTaGCTCTTCTGGGCAAATATG +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIKWNHN*LFWANM
Trigger: CATATTTGCCCAGAAGAGGCAGTTATGATTCCACTT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGATAAACACGGCAGAATaGAATACTTCCAGAAAGGCT +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEINTAE*NTSRKA
Trigger: AGCCTTTCTGGAAGTATTGCATTCTGCCGTGTTTAT...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCATCCTGAAACACACTaGTTGCTCAGCAAAAATAGT +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEHPETH*LLSKNS
Trigger: ACTATTTTTGCTGAGCAACCAGTGTGTTTCAGGATG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCATCCTGAAACACACTaGTTGCTCAGCAAAAATAGT +
Preference number: 4 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFHPETH*LLSKNS
Trigger: ACTATTTTTGCTGAGCAACCAGTGTGTTTCAGGATG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTCCTATTTGGAAACACTaGATCTCATGTAATGGCAGT +
Preference number: 4 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWAPIWKH*ISCNGS
Trigger: ACTGCCATTACATGAGATCCAGTGTTTCCAAATAGG...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR TCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTACAGAAAGAAAGCCATaGATGCACAATACTGTAATC +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVTERKP*MHNTVI
Trigger: GATTACAGTATTGTGCATTCATGGCTTTCTTTCTGT...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTGAGATCAATTGCTACTaGTGCTTCAAACAATGTTTG +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVEINCY*CFKQCL
Trigger: CAAACATTGTTTGAAGCATCAGTAGCAATTGATCTC...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR TCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTTATGTAATGTCTAAATaGTGCTTCAGTGACCACGTA +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPYVMSK*CFSDHV
Trigger: TACGTGGTCACTGAAGCATCATTTAGACATTACATA...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAATGTAATTGTGACTCATaGAAATACCTTGTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQCNCDS*KYLVRS
Trigger: TGACCTAACAAGGTATTTGCATGAGTCACAATTACA...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATTTCTCTATTTTCCCTaGAGCAGTTTTGTAGCATGT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIFLYFP*SSFVAC
Trigger: ACATGCTACAAAACTGCTCCAGGGAAAATAGAGAAA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCTAACATCATCCATTTaGTTTGTTTTTCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAELTSSI*FVFLFP
Trigger: GGGGAAGAGAAAAACAAACCAAATGGATGATGTTAG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
3UTR CAA 72 bp TATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTTaGCTTGCATTTAAAATAGCTATCTCCTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: YVKDLDFDSFWA*LAFKIAISFPK
Trigger: CTTTGGGAAGGAGATAGCTATTTTAAATGCAAGCAAAGCCCAGAAACTATCAAAGTCCAAATCTTTCACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAAACACTTTTACATTCTaGAACAGACACCTCAATTTC +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLINTFTF*NRHLNF
Trigger: GAAATTGAGGTGTCTGTTGCAGAATGTAAAAGTGTT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR GCA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTAGAAGCTCAGCTATGTaGCACTTAATATTTGTTATG +
Preference number: 4 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVRSSAM*HLIFVM
Trigger: CATAACAAATATTAAGTGGCACATAGCTGAGCTTCT...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTCTAAAAACAAAACAATaGCCTAAGAAGCTCAGCTAT +
Preference number: 4 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPLKTKQ*PKKLSY
Trigger: ATAGCTGAGCTTCTTAGGGCATTGTTTTGTTTTTAG...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR GCA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATGGCAGCTCACTGAATaGTTAAAATTCAGGAAATTT +
Preference number: 4 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIWQLTE*LKFRKF
Trigger: AAATTTCCTGAATTTTAAGCATTCAGTGAGCTGCCA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR GCA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTGGCAGCTCACTGAATaGTTAAAATTCAGGAAATTT +
Preference number: 4 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEWQLTE*LKFRKF
Trigger: AAATTTCCTGAATTTTAAGCATTCAGTGAGCTGCCA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS CCA 90 bp AGCTGGGGAGGCTTCTCTGGGCGCCCGCTCCCGGGGGCGCAGTCCTaGGGTTCTGCTCCAGTCCAGCGCCGCGCGGCCGCTGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: SWGGFSGRPLPGAQS*GSAPVQRRAAAASR
Trigger: GCGGGAGGCAGCGGCCGCGCGGCGCTGGACTGGAGCAGAACCCCAGGACTGCGCCCCCGGGAGCGGGCGCCCAGAGAAGCCTCCCCAGCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000434623.6
CDS CCA 90 bp TTTCTCTATTTTCCCTCTGGGCGCCCGCTCCCGGGGGCGCAGTCCTaGGGTTCTGCTCCAGTCCAGCGCCGCGCGGCCGCTGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: FLYFPSGRPLPGAQS*GSAPVQRRAAAASR
Trigger: GCGGGAGGCAGCGGCCGCGCGGCGCTGGACTGGAGCAGAACCCCAGGACTGCGCCCCCGGGAGCGGGCGCCCAGAGGGAAAATAGAGAAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS CCA 90 bp AGGGCCTGGCACACAGTAGGTGCCCAGTCATGGCTGTGGAACGAATaGCTGCATGCATGCGCGAGGGAACTCAGGACCTGCCCGGAGCTC +
Preference number: 5 (lower is better)
Translates to: RAWHTVGAQSWLWNE*LHACARELRTCPEL
Trigger: GAGCTCCGGGCAGGTCCTGAGTTCCCTCGCGCATGCATGCAGCCATTCGTTCCACAGCCATGACTGGGCACCTACTGTGTGCCAGGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674068.1
CDS TCA 90 bp CTGGGGAGGCTTCCTGCCCAGAGCGCGCGCCTCAAACCTCCTCAGTaGGAACTGCCTTTTTCCAGACAGATTCCTGCGTGCACCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LGRLPAQSARLKPPQ*ELPFSRQIPACTLA
Trigger: AGCCAGGGTGCACGCAGGAATCTGTCTGGAAAAAGGCAGTTCTCACTGAGGAGGTTTGAGGCGCGCGCTCTGGGCAGGAAGCCTCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259318.7
CDS TCA 90 bp ATATGCTCTCAGCCTGGGCCGTGCGAGGTCCTCAGAGCTCCAAGGTaGTCCGCCATCCCCAGCAAGACGCTCACAGACTTGGAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: ICSQPGPCEVLRAPR*SAIPSKTLTDLEGV
Trigger: CACTCCCTCCAAGTCTGTGAGCGTCTTGCTGGGGATGGCGGATCACCTTGGAGCTCTGAGGACCTCGCACGGCCCAGGCTGAGAGCATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS GCA 90 bp AGCACATTCTCCCACCCGACTCCAGCCGCTCTGCTGGTCCCGTCCTaGCCAGGTGATGGTTCTGCTGTTCGTGAACAGAGGATTGGCAGG +
Preference number: 5 (lower is better)
Translates to: STFSHPTPAALLVPS*PGDGSAVREQRIGR
Trigger: CCTGCCAATCCTCTGTTCACGAACAGCAGAACCATCACCTGGGCAGGACGGGACCAGCAGAGCGGCTGGAGTCGGGTGGGAGAATGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGTGCAGCGCTGGGGGCTaGGGCCTGCTGCCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKECSAGG*GLLPWV
Trigger: AACCCAGGGCAGCAGGCCCAAGCCCCCAGCGCTGCA...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS GCA 90 bp GGCTTCCTGCCCAGAGCGCGCGCCTCAAACCTCCTCAGTGAGAACTaGCTTTTTCCAGACAGATTCCTGCGTGCACCCTGGCTCAAGCTG +
Preference number: 5 (lower is better)
Translates to: GFLPRARASNLLSEN*LFPDRFLRAPWLKL
Trigger: CAGCTTGAGCCAGGGTGCACGCAGGAATCTGTCTGGAAAAAGGCAGTTCTCACTGAGGAGGTTTGAGGCGCGCGCTCTGGGCAGGAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259318.7
CDS GCA 90 bp TGCCATGGGGTCAGGGCTGCTATTACTGAGCTCGATGTGAGGAGGTaGCTGCCGGCTAGCTGTTCTTTCAGTGGGTTCTGGCTGGGTCGC +
Preference number: 5 (lower is better)
Translates to: CHGVRAAITELDVRR*LPASCSFSGFWLGR
Trigger: GCGACCCAGCCAGAACCCACTGAAAGAACAGCTAGCCGGCAGGCACCTCCTCACATCGAGCTCAGTAATAGCAGCCCTGACCCCATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp CAGAGCTGCGATGGGGGCTGCTGCTGCTGCTGCTGTAACTGCTTCTaGAGCAGCAACTGTTCCTGCTGTGCCCTTCTCTCTTTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: QSCDGGCCCCCCNCF*SSNCSCCALLSLRS
Trigger: GGAGCGCAAAGAGAGAAGGGCACAGCAGGAACAGTTGCTGCTGCAGAAGCAGTTACAGCAGCAGCAGCAGCAGCCCCCATCGCAGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp CGCCTCCTGGCTTCCTCCTCTTCGGCAGTTCCAGCGGGTATGCCCTaGAGCAGCCATTTCTCCCGAAGCACTTTGGACTTGGAATGCTGC +
Preference number: 5 (lower is better)
Translates to: RLLASSSSAVPAGMP*SSHFSRSTLDLECC
Trigger: GCAGCATTCCAAGTCCAAAGTGCTTCGGGAGAAATGGCTGCTGCAGGGCATACCCGCTGGAACTGCCGAAGAGGAGGAAGCCAGGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302798.7
ENST00000314527.9
ENST00000374530.7
ENST00000374531.6
ENST00000413420.5
ENST00000465091.1
ENST00000483909.5
ENST00000497711.1
CDS-3UTR CAA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGGGGGATTTCTGTCCCTaGGCGGCTGAGGCACCACTG +
Preference number: 5 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGGDFCP*AAEAPL
Trigger: CAGTGGTGCCTCAGCCGCCAAGGGACAGAAATCCCC...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCACCTGGAGGGCATTGGTaGTCTCATTGGATGCCCCGC +
Preference number: 5 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPPGGHW*SHWMPR
Trigger: GCGGGGCATCCAATGAGACAACCAATGCCCTCCAGG...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCACGGCCCTCTGAGGGGTaGTCAGTTTGTGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPRPSEG*SVCGVW
Trigger: CCAGACACCACAAACTGACAACCCCTCAGAGGGCCG...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCGGGCTGATCCAAGTTaGCCTCCGGCCCTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKERADPS*PPALQR
Trigger: GCGCTGCAGGGCCGGAGGCAAACTTGGATCAGCCCG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS TCA 90 bp TCTGCCTCTGCCATGGGGTCAGGGCTGCTATTACTGAGCTCGATGTaGGGAGGTGCCTGCCGGCTAGCTGTTCTTTCAGTGGGTTCTGGC +
Preference number: 5 (lower is better)
Translates to: SASAMGSGLLLLSSM*GGACRLAVLSVGSG
Trigger: GCCAGAACCCACTGAAAGAACAGCTAGCCGGCAGGCACCTCCTCACATCGAGCTCAGTAATAGCAGCCCTGACCCCATGGCAGAGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp GCTGTGCAGAGCTGCGATGGGGGCTGCTGCTGCTGCTGCTGTAACTaGTTCTGCAGCAGCAACTGTTCCTGCTGTGCCCTTCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: AVQSCDGGCCCCCCN*FCSSNCSCCALLSL
Trigger: CAAAGAGAGAAGGGCACAGCAGGAACAGTTGCTGCTGCAGAAGCAGTTACAGCAGCAGCAGCAGCAGCCCCCATCGCAGCTCTGCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp ACTGCCGCCTCCTGGCTTCCTCCTCTTCGGCAGTTCCAGCGGGTATaGCCTGCAGCAGCCATTTCTCCCGAAGCACTTTGGACTTGGAAT +
Preference number: 5 (lower is better)
Translates to: TAASWLPPLRQFQRV*PAAAISPEALWTWN
Trigger: ATTCCAAGTCCAAAGTGCTTCGGGAGAAATGGCTGCTGCAGGGCATACCCGCTGGAACTGCCGAAGAGGAGGAAGCCAGGAGGCGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302798.7
ENST00000314527.9
ENST00000374530.7
ENST00000374531.6
ENST00000413420.5
ENST00000465091.1
ENST00000483909.5
ENST00000497711.1
CDS GCA 90 bp CGGGCACACACGCAGTGTCACCTGCCCCACCGTCTCTGGGTGTGTTaGAAGCAGCAGCATTCTCCTAACATGTCTGCTGTAGGCTCGAAG +
Preference number: 5 (lower is better)
Translates to: RAHTQCHLPHRLWVC*KQQHSPNMSAVGSK
Trigger: CTTCGAGCCTACAGCAGACATGTTAGGAGAATGCTGCTGCTTGCAACACACCCAGAGACGGTGGGGCAGGTGACACTGCGTGTGTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465091.1
CDS-3UTR CAA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCCCATGGTCATCATCCTaGACCACAGTGAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRPWSSS*TTVRTA
Trigger: GGCTGTCCTCACTGTGGTCAAGGATGATGACCATGG...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCGCATTGGTTGTCTCATaGGATGCCCCGCTGTCACTG +
Preference number: 5 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRALVVS*DAPLSL
Trigger: CAGTGACAGCGGGGCATCCAATGAGACAACCAATGC...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCCTGGAGGGCATTGGTaGTCTCATTGGATGCCCCGC +
Preference number: 5 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHPGGHW*SHWMPR
Trigger: GCGGGGCATCCAATGAGACAACCAATGCCCTCCAGG...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTTGCAGCGCTGGGGGCTaGGGCCTGCTGCCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSCSAGG*GLLPWV
Trigger: AACCCAGGGCAGCAGGCCCAAGCCCCCAGCGCTGCA...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS GCA 90 bp CTTTGTCAATCATGCTTGCGCGTTCATGAGAAGAGGCAGGGGCTGTaGAGAGCTGCGATGGGGGCTGCTGCTGCTGCTGCTGTAACTGCT +
Preference number: 5 (lower is better)
Translates to: LCQSCLRVHEKRQGL*RAAMGAAAAAAVTA
Trigger: AGCAGTTACAGCAGCAGCAGCAGCAGCCCCCATCGCAGCTCTGCACAGCCCCTGCCTCTTCTCATGAACGCGCAAGCATGATTGACAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp TTCCTCCTGGTTGGCATAGATCCCTGCTTCCCAGCGCAAAGCCAGTaGGCTCTTTCTTCGATTAACCCGTGTGGCCTCGAGGACCTCGGA +
Preference number: 5 (lower is better)
Translates to: FLLVGIDPCFPAQSQ*ALSSINPCGLEDLG
Trigger: TCCGAGGTCCTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTGGGAAGCAGGGATCTATGCCAACCAGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374530.7
ENST00000434623.6
CDS GCA 90 bp TTCCTCCTGGTTGGCATAGATCCCTGCTTCCCAGCGCAAAGCCAGTaGGCTCTTTCTTCGATTAACCCGTGTGGCCTCGAGGACCTGGAG +
Preference number: 5 (lower is better)
Translates to: FLLVGIDPCFPAQSQ*ALSSINPCGLEDLE
Trigger: CTCCAGGTCCTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGCTTTGCGCTGGGAAGCAGGGATCTATGCCAACCAGGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482335.1
CDS CCA 90 bp CAGAGACACCGGGCACACACGCAGTGTCACCTGCCCCACCGTCTCTaGGTGTGTTGCAAGCAGCAGCATTCTCCTAACATGTCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: QRHRAHTQCHLPHRL*VCCKQQHSPNMSAV
Trigger: TACAGCAGACATGTTAGGAGAATGCTGCTGCTTGCAACACACCCAGAGACGGTGGGGCAGGTGACACTGCGTGTGTGCCCGGTGTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465091.1
CDS-3UTR CAA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATATGCCAGGATTCTTCTaGACGGCCTGGCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHMPGFF*TAWLRM
Trigger: CATCCGCAGCCAGGCCGTCAAGAAGAATCCTGGCAT...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCAGCATTGGTTGTCTCATaGGATGCCCCGCTGTCACTG +
Preference number: 5 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPALVVS*DAPLSL
Trigger: CAGTGACAGCGGGGCATCCAATGAGACAACCAATGC...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCCATCACGTCAGATTCTaGAGTGGCCAGGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPHHVRF*SGQEGG
Trigger: GCCTCCCTCCTGGCCACTCAAGAATCTGACGTGATG...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCATCACGTCAGATTCTaGAGTGGCCAGGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHHHVRF*SGQEGG
Trigger: GCCTCCCTCCTGGCCACTCAAGAATCTGACGTGATG...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCATTCCTGGACCTCAGCTaGAAAGGCCCAACCATCACG +
Preference number: 5 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPFLDLS*KGPTIT
Trigger: CGTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGAA...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGTGATGGGGCATTCTTaGTCCTGGGGCTCTGCGTAC +
Preference number: 5 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLVMGHS*SWGSAY
Trigger: GTACGCAGAGCCCCAGGACAAAGAATGCCCCATCAC...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACATGCAGCGCTGGGGGCTaGGGCCTGCTGCCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: TIERETTADGQVMESVPTCSAGG*GLLPWV
Trigger: AACCCAGGGCAGCAGGCCCAAGCCCCCAGCGCTGCA...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS GCA 90 bp CAGCGCATCTCTAGGCTGGCTGGGGGAATGGCCATTTGTTCTTTCTaGCTCTGCCATGGGGTCAGGGCTGCTATTACTGAGCTCGATGTG +
Preference number: 5 (lower is better)
Translates to: QRISRLAGGMAICSF*LCHGVRAAITELDV
Trigger: CACATCGAGCTCAGTAATAGCAGCCCTGACCCCATGGCAGAGGCAGAAAGAACAAATGGCCATTCCCCCAGCCAGCCTAGAGATGCGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp TTAATTTCCATGGCGTACACAGCAGCCGCTCTGCTGGTCCCGTCCTaGCCAGGTGATGGTTCTGCTGTTCGTGAACAGAGGATTGGCAGG +
Preference number: 5 (lower is better)
Translates to: LISMAYTAAALLVPS*PGDGSAVREQRIGR
Trigger: CCTGCCAATCCTCTGTTCACGAACAGCAGAACCATCACCTGGGCAGGACGGGACCAGCAGAGCGGCTGCTGTGTACGCCATGGAAATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000413420.5
ENST00000497711.1
CDS GCA 90 bp TGTATAGACACTTCCAGAGACACCGGGCACACACGCAGTGTCACCTaGCCCACCGTCTCTGGGTGTGTTGCAAGCAGCAGCATTCTCCTA +
Preference number: 5 (lower is better)
Translates to: CIDTSRDTGHTRSVT*PTVSGCVASSSILL
Trigger: TAGGAGAATGCTGCTGCTTGCAACACACCCAGAGACGGTGGGGCAGGTGACACTGCGTGTGTGCCCGGTGTCTCTGGAAGTGTCTATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465091.1
CDS GCA 90 bp AAAGCTGGGGAGGCTTCTTGGATCCATAAGCATATCCTGGGACCCTaGAGAGCTATATGCTCTCAGCCTGGGCCGTGCGAGGTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: KAGEASWIHKHILGP*RAICSQPGPCEVLR
Trigger: TCTGAGGACCTCGCACGGCCCAGGCTGAGAGCATATAGCTCTGCAGGGTCCCAGGATATGCTTATGGATCCAAGAAGCCTCCCCAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS GCA 90 bp TGGACTGGAAGTCAGCGGGACCTCAGCTCAACCGCGCACCCGTCGTaGAAGACTCCTCATTTCAAAGTTTCTTTGGGCGCCGACTTCTTG +
Preference number: 5 (lower is better)
Translates to: WTGSQRDLSSTAHPS*KTPHFKVSLGADFL
Trigger: CAAGAAGTCGGCGCCCAAAGAAACTTTGAAATGAGGAGTCTTGCACGACGGGTGCGCGGTTGAGCTGAGGTCCCGCTGACTTCCAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674068.1
CDS-3UTR CAA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCTCATCCTCAAAGAGCTaGGAGGGCTTCTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRSSSKS*EGFLSS
Trigger: TGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATGA...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCCTCTCTTTGCGCTCCTaGTACTTTTTGTGCGACTCC +
Preference number: 5 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRLSLRS*YFLCDS
Trigger: GGAGTCGCACAAAAAGTACAAGGAGCGCAAAGAGAG...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CAATGCTGCTGCCTCCTCTGTTCTTATCCCTGTGTCTGCTTTGGGAACGCCCCCCCATGGTCATCATCCTaGACCACAGTGAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: QCCCLLCSYPCVCFGNAPPWSSS*TTVRTA
Trigger: GGCTGTCCTCACTGTGGTCAAGGATGATGACCATGG...GGGGGCGTTCCCAAAGCAGACACAGGGATAAGAACAGAGGAGGCAGCAGCATTG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp CCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATCGCCCACTGCTCGGCTATGGCTaGTTGAATGGCATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: PGPYCSLSGPTTIVLHRPLLGYG*LNGILH
Trigger: GTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAG...TGGGCGATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCTGGATCCATTGTAGATaGGCCCCAAACCAGACACTG +
Preference number: 5 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRWIHCR*APNQTL
Trigger: CAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGCGGGCTGATCCAAGTTaGCCTCCGGCCCTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQRADPS*PPALQR
Trigger: GCGCTGCAGGGCCGGAGGCAAACTTGGATCAGCCCG...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS GCA 90 bp ATCTCTAGGCTGGCTGGGGGAATGGCCATTTGTTCTTTCTGCCTCTaGCATGGGGTCAGGGCTGCTATTACTGAGCTCGATGTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: ISRLAGGMAICSFCL*HGVRAAITELDVRR
Trigger: CCTCCTCACATCGAGCTCAGTAATAGCAGCCCTGACCCCATGGCAGAGGCAGAAAGAACAAATGGCCATTCCCCCAGCCAGCCTAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp CGCAGCTTCAGCTTCCTCTACAGTCGCTTCAGGTCCCTGTTGCTCTaGTCCATCCCTGCTGGTTTTGGACACAGCTTTATCCACCTGCTC +
Preference number: 5 (lower is better)
Translates to: RSFSFLYSRFRSLLL*SIPAGFGHSFIHLL
Trigger: GAGCAGGTGGATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCTGAAGCGACTGTAGAGGAAGCTGAAGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp AACGGCGCAAACTGTGCCGGGCAAAAAGAATTGAAGAAAGCGCGGTaGACCAAAGTTTCTAAGCAGGCTGGCTGCACCTCCTCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: NGANCAGQKELKKAR*TKVSKQAGCTSSGP
Trigger: AGGGCCAGAGGAGGTGCAGCCAGCCTGCTTAGAAACTTTGGTGCACCGCGCTTTCTTCAATTCTTTTTGCCCGGCACAGTTTGCGCCGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS-3UTR CAA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGCACGCAGCTCAAACTaGGCCTCCTTTTTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLARSSN*ASFFSV
Trigger: CACACTGAAAAAGGAGGCCAAGTTTGAGCTGCGTGC...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGGGTGTACTCTGGCCCTaGGCCACCGCTTGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: KDGANCPCAIWAAICRMWGVLWP*ATACLE
Trigger: TTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACACC...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGGTGTACTCTGGCCCTaGGCCACCGCTTGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQGVLWP*ATACLE
Trigger: TTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACACC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGGGGATTTCTGTCCCTaGGCGGCTGAGGCACCACTG +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSGDFCP*AAEAPL
Trigger: CAGTGGTGCCTCAGCCGCCAAGGGACAGAAATCCCC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGCTCGGCTATGGCTTGTaGAATGGCATTCTGCACCAG +
Preference number: 5 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLLGYGL*NGILHQ
Trigger: CTGGTGCAGAATGCCATTCAACAAGCCATAGCCGAG...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGCTGCTCGGCTATGGCTaGTTGAATGGCATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLLLGYG*LNGILH
Trigger: GTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAG...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGCGTACTCTGCAAGACTaGTCTCTGCCTCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLRTLQD*SLPLQL
Trigger: GAGCTGAAGAGGCAGAGACAAGTCTTGCAGAGTACG...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS TCA 90 bp AGGAGAAGACACCTGAGGTGGCTCAAACATGCTCTGAGGCTTTTCTaGGCCGAAAGCCGCAGCTTCAGCTTCCTCTACAGTCGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RRRHLRWLKHALRLF*AESRSFSFLYSRFR
Trigger: CCTGAAGCGACTGTAGAGGAAGCTGAAGCTGCGGCTTTCGGCTCAGAAAAGCCTCAGAGCATGTTTGAGCCACCTCAGGTGTCTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS TCA 90 bp GGTGATCCGCCATCCCCAGCAAGACGCTCACAGACTTGGAGGGAGTaGGTACCAGTTCCCATAAGAAGAACGAACAGCACTAGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: GDPPSPARRSQTWRE*VPVPIRRTNSTRRR
Trigger: CCTTCTCCTAGTGCTGTTCGTTCTTCTTATGGGAACTGGTACTCACTCCCTCCAAGTCTGTGAGCGTCTTGCTGGGGATGGCGGATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS GCA 90 bp CTTCCTCTACAGTCGCTTCAGGTCCCTGTTGCTCTGCTCCATCCCTaGTGGTTTTGGACACAGCTTTATCCACCTGCTCGGCTATGGCTT +
Preference number: 5 (lower is better)
Translates to: LPLQSLQVPVALLHP*WFWTQLYPPARLWL
Trigger: AAGCCATAGCCGAGCAGGTGGATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCTGAAGCGACTGTAGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp AAAGCCGCAGCTTCAGCTTCCTCTACAGTCGCTTCAGGTCCCTGTTaGTCTGCTCCATCCCTGCTGGTTTTGGACACAGCTTTATCCACC +
Preference number: 5 (lower is better)
Translates to: KAAASASSTVASGPC*SAPSLLVLDTALST
Trigger: GGTGGATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCTGAAGCGACTGTAGAGGAAGCTGAAGCTGCGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CCA 90 bp CCTCTACAGTCGCTTCAGGTCCCTGTTGCTCTGCTCCATCCCTGCTaGTTTTGGACACAGCTTTATCCACCTGCTCGGCTATGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: PLQSLQVPVALLHPC*FWTQLYPPARLWLV
Trigger: AACAAGCCATAGCCGAGCAGGTGGATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCTGAAGCGACTGTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS-3UTR CAA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGCGCTCCTTGTACTTTTaGTGCGACTCCAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGRSLYF*CDSRCS
Trigger: GGAACATCTGGAGTCGCACAAAAAGTACAAGGAGCG...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTCCTGGAGGGCATTGGTaGTCTCATTGGATGCCCCGC +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSPGGHW*SHWMPR
Trigger: GCGGGGCATCCAATGAGACAACCAATGCCCTCCAGG...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGTCTGCATCAGATTCTaGGGCCGCTGGGTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSVCIRF*GRWVPA
Trigger: TGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGAC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000495980.1
CDS-3UTR CAA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGTCTGCATCAGATTCTaGGGCCGCTGGGTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQVCIRF*GRWVPA
Trigger: TGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGAC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAGCTTGCAGCCTTTCCTaGTGCAATTCCGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKACSLS*CNSASA
Trigger: GGCAGAGGCGGAATTGCACAAGGAAAGGCTGCAAGC...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAACAGCTGGGCTGGAGTaGGGCCTGTTGGAGAGATTC +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKTAGLE*GLLERF
Trigger: GAATCTCTCCAACAGGCCCAACTCCAGCCCAGCTGT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS TCA 90 bp CTTCCTCAATCATGGACAAAGTCCGCTGTTTCCTGGACCTCAGCTTaGAAGGCCCAACCATCACGTCAGATTCTTGAGTGGCCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LPQSWTKSAVSWTSA*KAQPSRQILEWPGG
Trigger: CCCTCCTGGCCACTCAAGAATCTGACGTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGAAACAGCGGACTTTGTCCATGATTGAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
ENST00000482335.1
CDS TCA 90 bp TTCCAGCCCTCTTCAACGGCGCAAACTGTGCCGGGCAAAAAGAATTaGAGAAAGCGCGGTGCACCAAAGTTTCTAAGCAGGCTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: FQPSSTAQTVPGKKN*RKRGAPKFLSRLAA
Trigger: TGCAGCCAGCCTGCTTAGAAACTTTGGTGCACCGCGCTTTCTTCAATTCTTTTTGCCCGGCACAGTTTGCGCCGTTGAAGAGGGCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS CCA 90 bp CAGACACCTCAATTTCCATGTTTTTGTGATCTGGGGAAAGAGAGCTaGCAGCAGGCTCCAGGAGGGTGGCACTATAGTTGTCTCCCTCGC +
Preference number: 5 (lower is better)
Translates to: QTPQFPCFCDLGKES*QQAPGGWHYSCLPR
Trigger: GCGAGGGAGACAACTATAGTGCCACCCTCCTGGAGCCTGCTGCCAGCTCTCTTTCCCCAGATCACAAAAACATGGAAATTGAGGTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000471798.1
ENST00000480388.1
CDS CCA 90 bp TGGAGAACAGCCTGGGTGTACTCTGGCCCTTGGCCACCGCTTGCCTaGAATTCTCCATCAGCTGAAATTGTTTGCGAGCAGCAGAGAAAT +
Preference number: 5 (lower is better)
Translates to: WRTAWVYSGPWPPLA*NSPSAEIVCEQQRN
Trigger: ATTTCTCTGCTGCTCGCAAACAATTTCAGCTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACACCCAGGCTGTTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CCA 90 bp CATCCCTGCTGGTTTTGGACACAGCTTTATCCACCTGCTCGGCTATaGCTTGTTGAATGGCATTCTGCACCAGGAGGCCAGCCTGATACT +
Preference number: 5 (lower is better)
Translates to: HPCWFWTQLYPPARL*LVEWHSAPGGQPDT
Trigger: AGTATCAGGCTGGCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAGGTGGATAAAGCTGTGTCCAAAACCAGCAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTATGCCAGGATTCTTCTaGACGGCCTGGCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSMPGFF*TAWLRM
Trigger: CATCCGCAGCCAGGCCGTCAAGAAGAATCCTGGCAT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGATGTCCTCCTTTGCTTaGTCAATCATGCTTGCGCGT +
Preference number: 5 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGMSSFA*SIMLAR
Trigger: ACGCGCAAGCATGATTGACAAAGCAAAGGAGGACAT...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGCGGCCCTCTGAGGGGTaGTCAGTTTGTGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: PYKDGANCPCAIWAAICRRPSEG*SVCGVW
Trigger: CCAGACACCACAAACTGACAACCCCTCAGAGGGCCG...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp GTGGCCCTACCACCATTGTCCTTCATCGCCCAGAGAGGCTGGTCTCAGTTCCGCCAGCAGGCAGAATCTTaGGTAATACATCCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: VALPPLSFIAQRGWSQFRQQAES*VIHPFS
Trigger: AGAAAAGGGATGTATTACCAAAGATTCTGCCTGCTG...GCGGAACTGAGACCAGCCTCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTGTGATGGGGCATTCTTaGTCCTGGGGCTCTGCGTAC +
Preference number: 5 (lower is better)
Translates to: TALEELPVHPSATVTLEFVMGHS*SWGSAY
Trigger: GTACGCAGAGCCCCAGGACAAAGAATGCCCCATCAC...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTTTATTCGTTGGTCTGCATCAGATTCTaGGGCCGCTGGGTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: LVSQAPKTLPGLKEVYSLVCIRF*GRWVPA
Trigger: TGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGAC...CAACGAATAAACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR CAA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGTTCTCCCGAAGCACTTaGGACTTGGAATGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEFSRST*DLECCS
Trigger: GCTGCAGCATTCCAAGTCCAAAGTGCTTCGGGAGAA...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGCCCTCCTCCTAAGCTaGATTGTCCAGCCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEALLLS*IVQPSE
Trigger: TTCAGAAGGCTGGACAATCAAGCTTAGGAGGAGGGC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATCGGGCTGATCCAAGTTaGCCTCCGGCCCTGCAGCGC +
Preference number: 5 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDRADPS*PPALQR
Trigger: GCGCTGCAGGGCCGGAGGCAAACTTGGATCAGCCCG...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAACAGCGCTTTTTCTTTaGGGTACCTGGGGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKTALFL*GTWGWL
Trigger: GAGCCAGCCCCAGGTACCCAAAAGAAAAAGCGCTGT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS GCA 90 bp ATGTTATCTTCAAGTTGCTTGACTCTGAACTCATCCTCTTCAGACTaGCGCCTCCTGGCTTCCTCCTCTTCGGCAGTTCCAGCGGGTATG +
Preference number: 5 (lower is better)
Translates to: MLSSSCLTLNSSSSD*RLLASSSSAVPAGM
Trigger: CATACCCGCTGGAACTGCCGAAGAGGAGGAAGCCAGGAGGCGGCAGTCTGAAGAGGATGAGTTCAGAGTCAAGCAACTTGAAGATAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302798.7
ENST00000314527.9
ENST00000374530.7
ENST00000374531.6
ENST00000413420.5
ENST00000465091.1
ENST00000483909.5
ENST00000497711.1
CDS CCA 90 bp TTTTGGACACAGCTTTATCCACCTGCTCGGCTATGGCTTGTTGAATaGCATTCTGCACCAGGAGGCCAGCCTGATACTCCAAGGGGTCAT +
Preference number: 5 (lower is better)
Translates to: FWTQLYPPARLWLVE*HSAPGGQPDTPRGH
Trigger: ATGACCCCTTGGAGTATCAGGCTGGCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAGGTGGATAAAGCTGTGTCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CCA 90 bp TTTTGTAGCATGTTCTGGAGGGCAGTGATGGGGCATTCTTTGTCCTaGGGCTCTGCGTACTCTGCAAGACTTGTCTCTGCCTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: FCSMFWRAVMGHSLS*GSAYSARLVSASSA
Trigger: AGCTGAAGAGGCAGAGACAAGTCTTGCAGAGTACGCAGAGCCCCAGGACAAAGAATGCCCCATCACTGCCCTCCAGAACATGCTACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000482335.1
CDS-3UTR CAA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGCCCTTGGCCACCGCTaGCCTGGAATTCTCCATCAG +
Preference number: 5 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKALGHR*PGILHQ
Trigger: CTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGGC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTCCATGGTCATCATCCTaGACCACAGTGAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSPWSSS*TTVRTA
Trigger: GGCTGTCCTCACTGTGGTCAAGGATGATGACCATGG...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGCATTGGTTGTCTCATaGGATGCCCCGCTGTCACTG +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSALVVS*DAPLSL
Trigger: CAGTGACAGCGGGGCATCCAATGAGACAACCAATGC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTCATCACGTCAGATTCTaGAGTGGCCAGGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSHHVRF*SGQEGG
Trigger: GCCTCCCTCCTGGCCACTCAAGAATCTGACGTGATG...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTTCCTGGACCTCAGCTaGAAAGGCCCAACCATCACG +
Preference number: 5 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQFLDLS*KGPTIT
Trigger: CGTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGAA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTTCCTGGACCTCAGCTaGAAAGGCCCAACCATCACG +
Preference number: 5 (lower is better)
Translates to: TALEELPVHPSATVTLEFFLDLS*KGPTIT
Trigger: CGTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGAA...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATTTTTTCTGCTATGGCTaGCAGCCTTTCCTTGTGCAA +
Preference number: 5 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHFFCYG*QPFLVQ
Trigger: TTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAAA...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCTGCTCGTCAAGCTGTaGTCGCTTGCCTTCTATTTC +
Preference number: 5 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKELLVKL*SLAFYF
Trigger: GAAATAGAAGGCAAGCGACAACAGCTTGACGAGCAG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCGAAGCACTTTGGACTaGGAATGCTGCAGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKERSTLD*ECCSRS
Trigger: ACTTCTGCTGCAGCATTCCAAGTCCAAAGTGCTTCG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp GGTGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGAGGATGATTTGCTCTTaGGCAGATATCTGGGACTCT +
Preference number: 5 (lower is better)
Translates to: GGKLVQGNILCHVGCTSLRMICS*ADIWDS
Trigger: AGAGTCCCAGATATCTGCCAAAGAGCAAATCATCCT...CAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGTTCGTGAACAGAGGATaGGCAGGTCGGGAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: PYKDGANCPCAIWAAICRFVNRG*AGREAG
Trigger: CCCAGCTTCCCGACCTGCCAATCCTCTGTTCACGAA...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR CAA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGGTGGCCCTACCACCATaGTCCTTCATCGCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: PYKDGANCPCAIWAAICRVALPP*SFIAQR
Trigger: TCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTTGCTCCCAGATCCAGTaGGGGGTCTGCAAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSCSQIQ*GVCKFP
Trigger: AGGAAACTTGCAGACCCCCAACTGGATCTGGGAGCA...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAAGTTTGGATCAGGCATaGCCTGGTGGCCTCTGTGTA +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKSLDQA*PGGLCV
Trigger: TACACAGAGGCCACCAGGCAATGCCTGATCCAAACT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS TCA 90 bp GTACTCTGGCCCTTGGCCACCGCTTGCCTGGAATTCTCCATCAGCTaGAATTGTTTGCGAGCAGCAGAGAAATCTATCTGCTCTGTGACA +
Preference number: 5 (lower is better)
Translates to: VLWPLATACLEFSIS*NCLRAAEKSICSVT
Trigger: TGTCACAGAGCAGATAGATTTCTCTGCTGCTCGCAAACAATTTCAGCTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS TCA 90 bp TCCATGCTGAAATCATTGGATAGGGTCTCCAGGACTGTGGTATCCTaGGACCTCACCGACAATTCGTCCAGACCAGAGTCAAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: SMLKSLDRVSRTVVS*DLTDNSSRPESSSS
Trigger: AGAGGAGCTTGACTCTGGTCTGGACGAATTGTCGGTGAGGTCTCAGGATACCACAGTCCTGGAGACCCTATCCAATGATTTCAGCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp TGTTCCTGCTGTGCCCTTCTCTCTTTGCGCTCCTTGTACTTTTTGTaGGACTCCAGATGTTCCTCGTCCAGCTGCTCCTCGATGGTTTTT +
Preference number: 5 (lower is better)
Translates to: CSCCALLSLRSLYFL*DSRCSSSSCSSMVF
Trigger: AAAAACCATCGAGGAGCAGCTGGACGAGGAACATCTGGAGTCGCACAAAAAGTACAAGGAGCGCAAAGAGAGAAGGGCACAGCAGGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp GCGAGCAGCAGAGAAATCTATCTGCTCTGTGACAATGTCCTCCTTTaGTTTGTCAATCATGCTTGCGCGTTCATGAGAAGAGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: ASSREIYLLCDNVLL*FVNHACAFMRRGRG
Trigger: GCCCCTGCCTCTTCTCATGAACGCGCAAGCATGATTGACAAAGCAAAGGAGGACATTGTCACAGAGCAGATAGATTTCTCTGCTGCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTGCACGCAGCTCAAACTaGGCCTCCTTTTTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSARSSN*ASFFSV
Trigger: CACACTGAAAAAGGAGGCCAAGTTTGAGCTGCGTGC...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGGCACGCAGCTCAAACTaGGCCTCCTTTTTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQARSSN*ASFFSV
Trigger: CACACTGAAAAAGGAGGCCAAGTTTGAGCTGCGTGC...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGCCATCCCTGCTGGTTTaGGACACAGCTTTATCCACC +
Preference number: 5 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQPSLLV*DTALST
Trigger: GGTGGATAAAGCTGTGTCCAAAACCAGCAGGGATGG...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTCCATCCCTGCTGGTTTaGGACACAGCTTTATCCACC +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSPSLLV*DTALST
Trigger: GGTGGATAAAGCTGTGTCCAAAACCAGCAGGGATGG...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTCCATCCCTGCTGGTTTaGGACACAGCTTTATCCACC +
Preference number: 5 (lower is better)
Translates to: TALEELPVHPSATVTLEFPSLLV*DTALST
Trigger: GGTGGATAAAGCTGTGTCCAAAACCAGCAGGGATGG...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTCGTACTCTGCAAGACTaGTCTCTGCCTCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSRTLQD*SLPLQL
Trigger: GAGCTGAAGAGGCAGAGACAAGTCTTGCAGAGTACG...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGGCTTGCAGCCTTTCCTaGTGCAATTCCGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLACSLS*CNSASA
Trigger: GGCAGAGGCGGAATTGCACAAGGAAAGGCTGCAAGC...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR CAA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGGCTTGCAGCCTTTCCTaGTGCAATTCCGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRACSLS*CNSASA
Trigger: GGCAGAGGCGGAATTGCACAAGGAAAGGCTGCAAGC...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGTCAAGCTGTTGTCGCTaGCCTTCTATTTCAGTCTGC +
Preference number: 5 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKESSCCR*PSISVC
Trigger: GCAGACTGAAATAGAAGGCAAGCGACAACAGCTTGA...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTTTCTCCCGAAGCACTTaGGACTTGGAATGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSFSRST*DLECCS
Trigger: GCTGCAGCATTCCAAGTCCAAAGTGCTTCGGGAGAA...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTGCCCTCCTCCTAAGCTaGATTGTCCAGCCTTCTGAA +
Preference number: 5 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSALLLS*IVQPSE
Trigger: TTCAGAAGGCTGGACAATCAAGCTTAGGAGGAGGGC...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGGCACGCAGCTCAAACTaGGCCTCCTTTTTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: PYKDGANCPCAIWAAICRARSSN*ASFFSV
Trigger: CACACTGAAAAAGGAGGCCAAGTTTGAGCTGCGTGC...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCAGCTTGGAGGGCTTCTaGTCCTCATGGAAGGCACGC +
Preference number: 5 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSSLEGF*SSWKAR
Trigger: GCGTGCCTTCCATGAGGACAAGAAGCCCTCCAAGCT...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGCGCTCCTTGTACTTTTaGTGCGACTCCAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQRSLYF*CDSRCS
Trigger: GGAACATCTGGAGTCGCACAAAAAGTACAAGGAGCG...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTAGAGTCAAGCTCCTCTaGGGTCAAGGAGACATTGAC +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSRVKLL*GQGDID
Trigger: GTCAATGTCTCCTTGACCCAAGAGGAGCTTGACTCT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTAGAGTCAAGCTCCTCTaGGGTCAAGGAGACATTGAC +
Preference number: 5 (lower is better)
Translates to: TALEELPVHPSATVTLEFRVKLL*GQGDID
Trigger: GTCAATGTCTCCTTGACCCAAGAGGAGCTTGACTCT...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGCATTGGTTGTCTCATaGGATGCCCCGCTGTCACTG +
Preference number: 5 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKALVVS*DAPLSL
Trigger: CAGTGACAGCGGGGCATCCAATGAGACAACCAATGC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGCGTACTCTGCAAGACTaGTCTCTGCCTCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: PYKDGANCPCAIWAAICRRTLQD*SLPLQL
Trigger: GAGCTGAAGAGGCAGAGACAAGTCTTGCAGAGTACG...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp AGCCAGTGCGCTCTTTCTTCGATTAACCCGTGTGGCCTCGAGGACACTACTATCAAGACGCTTCCTGGGTaGAAGGAAGTTTATTCGTTG +
Preference number: 5 (lower is better)
Translates to: SQCALSSINPCGLEDTTIKTLPG*KEVYSL
Trigger: CAACGAATAAACTTCCTTCAACCCAGGAAGCGTCTT...GATAGTAGTGTCCTCGAGGCCACACGGGTTAATCGAAGAAAGAGCGCACTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR CAA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAGCTTGCAGCCTTTCCTaGTGCAATTCCGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SGGITCTPKCHGHSGILIACSLS*CNSASA
Trigger: GGCAGAGGCGGAATTGCACAAGGAAAGGCTGCAAGC...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp CACCAGCCTGGGCCCTACTGCTCTCTAAGTGGCCCTACCACCATTGTCCTTCATTTATCTTCAAGTTGCTaGACTCTGAACTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: HQPGPYCSLSGPTTIVLHLSSSC*TLNSSS
Trigger: AGAGGATGAGTTCAGAGTCAAGCAACTTGAAGATAA...ATGAAGGACAATGGTGGTAGGGCCACTTAGAGAGCAGTAGGGCCCAGGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp TTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGGTGGCCCTACCACCATaGTCCTTCATCGCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: FRRLNHIKMVPIAHVLFGVALPP*SFIAQR
Trigger: TCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC...CCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp GAAAAGCAAGTTCTTGGAGAGAATGAAGCACACACATGCACGTTGTCTCTCAGGACAGCGCTTTTTCTTTaGGGTACCTGGGGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: EKQVLGENEAHTCTLSLRTALFL*GTWGWL
Trigger: GAGCCAGCCCCAGGTACCCAAAAGAAAAAGCGCTGT...CCTGAGAGACAACGTGCATGTGTGTGCTTCATTCTCTCCAAGAACTTGCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp AAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGATGTGGGTTAAAAGGGTCCATTaGGGATCCCAGAGCCTAGCA +
Preference number: 5 (lower is better)
Translates to: KDGANCPCAIWAAICRMWVKRVH*GSQSLA
Trigger: TGCTAGGCTCTGGGATCCCAAATGGACCCTTTTAAC...CCACATCCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp CCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGGGCCACAGTGTGGGGTTAACAAGCTaGTGTGCTATTTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: PEGSIGVIAKVKRCRGHSVGLTS*CAIWGW
Trigger: CCACCCCCAAATAGCACACAAGCTTGTTAACCCCAC...ACTGTGGCCCCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS CCA 90 bp AGGATGTTCCATTGTACGTTCCATCCACAGCAGAATCACAGCAGTTaGCCTCTAGCACCTCATCTAGATAGCGGATCTCTCTGGCAACAT +
Preference number: 5 (lower is better)
Translates to: RMFHCTFHPQQNHSS*PLAPHLDSGSLWQH
Trigger: ATGTTGCCAGAGAGATCCGCTATCTAGATGAGGTGCTAGAGGCCAACTGCTGTGATTCTGCTGTGGATGGAACGTACAATGGAACATCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CCA 90 bp ACCATTTCTAACTTAGCTTCTTTGCAGAGCATGTGTTCCTTGGGATaGCTGAGGCTCCCATCTGCAATCACAGTCCTTTCAGACACGTGC +
Preference number: 5 (lower is better)
Translates to: TISNLASLQSMCSLG*LRLPSAITVLSDTC
Trigger: GCACGTGTCTGAAAGGACTGTGATTGCAGATGGGAGCCTCAGCCATCCCAAGGAACACATGCTCTGCAAAGAAGCTAAGTTAGAAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS-3UTR CAA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATGGGGGAATGGCCATTaGTTCTTTCTGCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKWGNGH*FFLPLP
Trigger: TGGCAGAGGCAGAAAGAACAAATGGCCATTCCCCCA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGGGAAACTGGTGCAGGGAAATATCCTGTGCCATGTAGGCTGCACCAGCCTGGGTTTTCTAATGCAGTATaGTTCTTTCTCATGCTCGTC +
Preference number: 5 (lower is better)
Translates to: WETGAGKYPVPCRLHQPGFSNAV*FFLMLV
Trigger: GACGAGCATGAGAAAGAACAATACTGCATTAGAAAA...CCCAGGCTGGTGCAGCCTACATGGCACAGGATATTTCCCTGCACCAGTTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTCTTTGTCAATCATGCTaGCGCGTTCATGAGAAGAGG +
Preference number: 5 (lower is better)
Translates to: TALEELPVHPSATVTLEFLCQSC*RVHEKR
Trigger: CCTCTTCTCATGAACGCGCAAGCATGATTGACAAAG...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGATGTCCTCCTTTGCTTaGTCAATCATGCTTGCGCGT +
Preference number: 5 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQMSSFA*SIMLAR
Trigger: ACGCGCAAGCATGATTGACAAAGCAAAGGAGGACAT...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTATGTCCTCCTTTGCTTaGTCAATCATGCTTGCGCGT +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSMSSFA*SIMLAR
Trigger: ACGCGCAAGCATGATTGACAAAGCAAAGGAGGACAT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGCCCTTGGCCACCGCTaGCCTGGAATTCTCCATCAG +
Preference number: 5 (lower is better)
Translates to: MERNAIHFMAAGENGVNAALGHR*PGILHQ
Trigger: CTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGGC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAGCCCTTGGCCACCGCTaGCCTGGAATTCTCCATCAG +
Preference number: 5 (lower is better)
Translates to: KCRRSGIITASSGQIWREALGHR*PGILHQ
Trigger: CTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGGC...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTGGTGTACTCTGGCCCTaGGCCACCGCTTGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTGVLWP*ATACLE
Trigger: TTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACACC...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTGGTGTACTCTGGCCCTaGGCCACCGCTTGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: RVQILYVYILPHPIIKIVGVLWP*ATACLE
Trigger: TTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACACC...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAGGATTAGTCAGTGGCTaGTCTGAGTTGACTGACCCC +
Preference number: 5 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKGLVSG*SELTDP
Trigger: GGGGTCAGTCAACTCAGACAAGCCACTGACTAATCC...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGCCGCTCTAAAAATGCCCCCACCATCTTGAACCAAGTTGTTCAACGCGTACAGTCCATGCTGAAATCATaGGATAGGGTCTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: CRSKNAPTILNQVVQRVQSMLKS*DRVSRT
Trigger: AGTCCTGGAGACCCTATCCAATGATTTCAGCATGGA...CTGTACGCGTTGAACAACTTGGTTCAAGATGGTGGGGGCATTTTTAGAGCGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCACCTGGAGGGCATTGGTaGTCTCATTGGATGCCCCGC +
Preference number: 5 (lower is better)
Translates to: MERNAIHFMAAGENGVNAPGGHW*SHWMPR
Trigger: GCGGGGCATCCAATGAGACAACCAATGCCCTCCAGG...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAACTCGGCTATGGCTTGTaGAATGGCATTCTGCACCAG +
Preference number: 5 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKLGYGL*NGILHQ
Trigger: CTGGTGCAGAATGCCATTCAACAAGCCATAGCCGAG...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGGCTTGCAGCCTTTCCTaGTGCAATTCCGCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMACSLS*CNSASA
Trigger: GGCAGAGGCGGAATTGCACAAGGAAAGGCTGCAAGC...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATTTTTCTGCTATGGCTaGCAGCCTTTCCTTGTGCAA +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKFFCYG*QPFLVQ
Trigger: TTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAAA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACACGAAGCACTTTGGACTaGGAATGCTGCAGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: TIERETTADGQVMESVPTRSTLD*ECCSRS
Trigger: ACTTCTGCTGCAGCATTCCAAGTCCAAAGTGCTTCG...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGTTCTCCCGAAGCACTTaGGACTTGGAATGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLFSRST*DLECCS
Trigger: GCTGCAGCATTCCAAGTCCAAAGTGCTTCGGGAGAA...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAAGGATGATTTGCTCTTaGGCAGATATCTGGGACTCT +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKRMICS*ADIWDS
Trigger: AGAGTCCCAGATATCTGCCAAAGAGCAAATCATCCT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGCTTGGTCTCTCCTGTTaGTTTGTCTTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKELGLSC*FVFLHI
Trigger: AATGTGGAGAAAGACAAACAAACAGGAGAGACCAAG...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGGCTCTTCTACATCCTTaGTGCTTAATTTGTGCACTC +
Preference number: 5 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKEALLHP*CLICAL
Trigger: GAGTGCACAAATTAAGCACAAAGGATGTAGAAGAGC...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGGTTAAAAGGGTCCATTaGGGATCCCAGAGCCTAGCA +
Preference number: 5 (lower is better)
Translates to: PYKDGANCPCAIWAAICRVKRVH*GSQSLA
Trigger: TGCTAGGCTCTGGGATCCCAAATGGACCCTTTTAAC...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTACGGCTTATATGTCATaGTCTAGGGTGAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSTAYMS*SRVSSM
Trigger: CATGCTGCTCACCCTAGACAATGACATATAAGCCGT...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS TCA 90 bp TCTCTATTTTCCCAGAGGACATGCCTAAGCCAGGGCCTCCTTCAATaGCCTCCTTTCTTCACACAGCATTGGGATAAGGTTGCAAACATC +
Preference number: 5 (lower is better)
Translates to: SLFSQRTCLSQGLLQ*PPFFTQHWDKVANI
Trigger: GATGTTTGCAACCTTATCCCAATGCTGTGTGAAGAAAGGAGGTCATTGAAGGAGGCCCTGGCTTAGGCATGTCCTCTGGGAAAATAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485762.1
CDS CCA 90 bp GGTACCATCATCATAGACTTTGACTCCTTTCTGATGGACCCCCTCTaGGCCAATGGTAGATGTAGAGAGAATCTTGGTCTCTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: GTIIIDFDSFLMDPL*ANGRCRENLGLSCL
Trigger: CAAACAGGAGAGACCAAGATTCTCTCTACATCTACCATTGGCCCAGAGGGGGTCCATCAGAAAGGAGTCAAAGTCTATGATGATGGTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS-3UTR CAA 90 bp CCATATAAAGATGGTGCCAATTGCCCATGTGCTATTTGGGCTGCCATCTGTAGGCTTTGTCAATCATGCTaGCGCGTTCATGAGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PYKDGANCPCAIWAAICRLCQSC*RVHEKR
Trigger: CCTCTTCTCATGAACGCGCAAGCATGATTGACAAAG...CCTACAGATGGCAGCCCAAATAGCACATGGGCAATTGGCACCATCTTTATATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAAAGAGTCAAGCTCCTCTaGGGTCAAGGAGACATTGAC +
Preference number: 5 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKRVKLL*GQGDID
Trigger: GTCAATGTCTCCTTGACCCAAGAGGAGCTTGACTCT...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCGGCCCTCTGAGGGGTaGTCAGTTTGTGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTRPSEG*SVCGVW
Trigger: CCAGACACCACAAACTGACAACCCCTCAGAGGGCCG...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATACTGCTCGGCTATGGCTaGTTGAATGGCATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: SGGITCTPKCHGHSGILILLGYG*LNGILH
Trigger: GTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAG...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GTTGGCATAGATCCCTGCTTCCCAGCGCAAAGCCAGTGCGCTCTTTCTTCGATTTCAGTTGTTAATTTCTaGGTTTCTTGGTCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: VGIDPCFPAQSQCALSSISVVNF*VSWSPK
Trigger: CTTGGGAGACCAAGAAACCAAGAAATTAACAACTGA...AATCGAAGAAAGAGCGCACTGGCTTTGCGCTGGGAAGCAGGGATCTATGCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS-3UTR CAA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGTGGATCCATTGTAGATaGGCCCCAAACCAGACACTG +
Preference number: 5 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLWIHCR*APNQTL
Trigger: CAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAACTGCTCGTCAAGCTGTaGTCGCTTGCCTTCTATTTC +
Preference number: 5 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKLLVKL*SLAFYF
Trigger: GAAATAGAAGGCAAGCGACAACAGCTTGACGAGCAG...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGCTGCTCGTCAAGCTGTaGTCGCTTGCCTTCTATTTC +
Preference number: 5 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLLLVKL*SLAFYF
Trigger: GAAATAGAAGGCAAGCGACAACAGCTTGACGAGCAG...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR CAA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAACGAAGCACTTTGGACTaGGAATGCTGCAGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKRSTLD*ECCSRS
Trigger: ACTTCTGCTGCAGCATTCCAAGTCCAAAGTGCTTCG...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTAGGATGATTTGCTCTTaGGCAGATATCTGGGACTCT +
Preference number: 5 (lower is better)
Translates to: TALEELPVHPSATVTLEFRMICS*ADIWDS
Trigger: AGAGTCCCAGATATCTGCCAAAGAGCAAATCATCCT...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAGCTCTTCTACATCCTTaGTGCTTAATTTGTGCACTC +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKALLHP*CLICAL
Trigger: GAGTGCACAAATTAAGCACAAAGGATGTAGAAGAGC...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATCTAACTTAGCTTCTTaGCAGAGCATGTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKSNLAS*QSMCSL
Trigger: CAAGGAACACATGCTCTGCAAAGAAGCTAAGTTAGA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACATGACAACACAGCATaGACAGCGCTTTTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKHDNTA*TALFLL
Trigger: CAAAAGAAAAAGCGCTGTCAATGCTGTGTTGTCATG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAAGTCTGTTTTTACACTaGGCCTCAACATTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKSLFLH*ASTFCS
Trigger: GGAGCAAAATGTTGAGGCCAAGTGTAAAAACAGACT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGCCCACTTTAGCCCCTTaGGGCCACACCTGCAAGGTT +
Preference number: 5 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMPTLAP*GHTCKV
Trigger: AACCTTGCAGGTGTGGCCCAAAGGGGCTAAAGTGGG...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGAGGAATTTAAGCGATTaGCATGGGAACCAGAGGGGT +
Preference number: 5 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQRNLSD*HGNQRG
Trigger: ACCCCTCTGGTTCCCATGCAAATCGCTTAAATTCCT...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS TCA 90 bp ACCAGAGTCAAGCTCCTCTTGGGTCAAGGAGACATTGACAGATCTTaGGAACTGATCCAAAATCCCATGGTCATCATCCTTGACCACAGT +
Preference number: 5 (lower is better)
Translates to: TRVKLLLGQGDIDRS*ELIQNPMVIILDHS
Trigger: ACTGTGGTCAAGGATGATGACCATGGGATTTTGGATCAGTTCTCAAGATCTGTCAATGTCTCCTTGACCCAAGAGGAGCTTGACTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp TCCTCTGAAGGCCTCACTTTTCTAATGCAGTATTGTTCTTTCTCATaGTCGTCATCCTCAAAGAGCTTGGAGGGCTTCTTGTCCTCATGG +
Preference number: 5 (lower is better)
Translates to: SSEGLTFLMQYCSFS*SSSSKSLEGFLSSW
Trigger: CCATGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATGACGAGCATGAGAAAGAACAATACTGCATTAGAAAAGTGAGGCCTTCAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS-3UTR CAA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTAGCTTGGAGGGCTTCTaGTCCTCATGGAAGGCACGC +
Preference number: 5 (lower is better)
Translates to: RVQILYVYILPHPIIKIVSLEGF*SSWKAR
Trigger: GCGTGCCTTCCATGAGGACAAGAAGCCCTCCAAGCT...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTAGCTTGGAGGGCTTCTaGTCCTCATGGAAGGCACGC +
Preference number: 5 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTSLEGF*SSWKAR
Trigger: GCGTGCCTTCCATGAGGACAAGAAGCCCTCCAAGCT...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAACTCCATCAGCTGAAATaGTTTGCGAGCAGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKLHQLK*FASSRE
Trigger: TTCTCTGCTGCTCGCAAACAATTTCAGCTGATGGAG...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGGTGTACTCTGGCCCTaGGCCACCGCTTGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEGVLWP*ATACLE
Trigger: TTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACACC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGGGGATTTCTGTCCCTaGGCGGCTGAGGCACCACTG +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIGDFCP*AAEAPL
Trigger: CAGTGGTGCCTCAGCCGCCAAGGGACAGAAATCCCC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAACCATGGTCATCATCCTaGACCACAGTGAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: KCRRSGIITASSGQIWREPWSSS*TTVRTA
Trigger: GGCTGTCCTCACTGTGGTCAAGGATGATGACCATGG...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCACCATGGTCATCATCCTaGACCACAGTGAGGACAGCC +
Preference number: 5 (lower is better)
Translates to: MERNAIHFMAAGENGVNAPWSSS*TTVRTA
Trigger: GGCTGTCCTCACTGTGGTCAAGGATGATGACCATGG...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATCCATGCTGAAATCATaGGATAGGGTCTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKSMLKS*DRVSRT
Trigger: AGTCCTGGAGACCCTATCCAATGATTTCAGCATGGA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGCTGCTCGGCTATGGCTaGTTGAATGGCATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRLLGYG*LNGILH
Trigger: GTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAG...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp TCTTGGTTTCTTGGTCTCCCAAGCACCAAAGACGCTTCCTGGGTTGAAGGAAGTCAGCAGGCAGAATCTTaGGTAATACATCCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SWFLGLPSTKDASWVEGSQQAES*VIHPFS
Trigger: AGAAAAGGGATGTATTACCAAAGATTCTGCCTGCTG...ACTTCCTTCAACCCAGGAAGCGTCTTTGGTGCTTGGGAGACCAAGAAACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCGAAGCACTTTGGACTaGGAATGCTGCAGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSRSTLD*ECCSRS
Trigger: ACTTCTGCTGCAGCATTCCAAGTCCAAAGTGCTTCG...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAATTATCTTCAAGTTGCTaGACTCTGAACTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKLSSSC*TLNSSS
Trigger: AGAGGATGAGTTCAGAGTCAAGCAACTTGAAGATAA...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp GGCCACACCTGCAAGGTTCTGCCTCAATGCTCCTGTAATGAAATTCACAGCTCTCTTGGTCTCTCCTGTTaGTTTGTCTTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: GHTCKVLPQCSCNEIHSSLGLSC*FVFLHI
Trigger: AATGTGGAGAAAGACAAACAAACAGGAGAGACCAAG...AGAGCTGTGAATTTCATTACAGGAGCATTGAGGCAGAACCTTGCAGGTGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp TACAGTGAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGTCCTTTGTGCTTAATTaGTGCACTCCATTTTCTACT +
Preference number: 5 (lower is better)
Translates to: YSEVYVSGGEYRLPRRKESFVLN*CTPFST
Trigger: AGTAGAAAATGGAGTGCACAAATTAAGCACAAAGGA...CTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTCACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGACATGACAACACAGCATaGACAGCGCTTTTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRHDNTA*TALFLL
Trigger: CAAAAGAAAAAGCGCTGTCAATGCTGTGTTGTCATG...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAACTCTTTTGCTACCCATaGGTTCAACTGGCATTAAAT +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKLFCYP*VQLALN
Trigger: ATTTAATGCCAGTTGAACCAATGGGTAGCAAAAGAG...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGATACATACAGAATAGTTaGGATCAGGCATTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRYIQNS*DQALPG
Trigger: ACCAGGCAATGCCTGATCCAAACTATTCTGTATGTA...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS TCA 90 bp CTTTCAGACACGTGCCCTCCTCCTAAGCTTGATTGTCCAGCCTTCTaGATAAGCTCTTCTACATCCTTTGTGCTTAATTTGTGCACTCCA +
Preference number: 5 (lower is better)
Translates to: LSDTCPPPKLDCPAF*ISSSTSFVLNLCTP
Trigger: TGGAGTGCACAAATTAAGCACAAAGGATGTAGAAGAGCTTATTCAGAAGGCTGGACAATCAAGCTTAGGAGGAGGGCACGTGTCTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS-3UTR CAA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAGCAGAATCACAGCAGTaGGCCTCTAGCACCTCATCT +
Preference number: 5 (lower is better)
Translates to: KCRRSGIITASSGQIWREAESQQ*ASSTSS
Trigger: AGATGAGGTGCTAGAGGCCAACTGCTGTGATTCTGC...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAGCAGAATCACAGCAGTaGGCCTCTAGCACCTCATCT +
Preference number: 5 (lower is better)
Translates to: MERNAIHFMAAGENGVNAAESQQ*ASSTSS
Trigger: AGATGAGGTGCTAGAGGCCAACTGCTGTGATTCTGC...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAATGGGGGAATGGCCATTaGTTCTTTCTGCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: KCRRSGIITASSGQIWREWGNGH*FFLPLP
Trigger: TGGCAGAGGCAGAAAGAACAAATGGCCATTCCCCCA...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCTCCATCAGCTGAAATaGTTTGCGAGCAGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSLHQLK*FASSRE
Trigger: TTCTCTGCTGCTCGCAAACAATTTCAGCTGATGGAG...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGCCCTTGGCCACCGCTaGCCTGGAATTCTCCATCAG +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVALGHR*PGILHQ
Trigger: CTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGGC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CAAAATATTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTGGATTAGTCAGTGGCTaGTCTGAGTTGACTGACCCC +
Preference number: 5 (lower is better)
Translates to: QNIQETQPYKDGANCPCAGLVSG*SELTDP
Trigger: GGGGTCAGTCAACTCAGACAAGCCACTGACTAATCC...AGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAATATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCTCCATGCTGAAATCATaGGATAGGGTCTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSSMLKS*DRVSRT
Trigger: AGTCCTGGAGACCCTATCCAATGATTTCAGCATGGA...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCCTGGAGGGCATTGGTaGTCTCATTGGATGCCCCGC +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEPGGHW*SHWMPR
Trigger: GCGGGGCATCCAATGAGACAACCAATGCCCTCCAGG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCGGCCCTCTGAGGGGTaGTCAGTTTGTGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFRPSEG*SVCGVW
Trigger: CCAGACACCACAAACTGACAACCCCTCAGAGGGCCG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTCGGCCCTCTGAGGGGTaGTCAGTTTGTGGTGTCTGG +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVRPSEG*SVCGVW
Trigger: CCAGACACCACAAACTGACAACCCCTCAGAGGGCCG...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAACGTACTCTGCAAGACTaGTCTCTGCCTCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: KCRRSGIITASSGQIWRERTLQD*SLPLQL
Trigger: GAGCTGAAGAGGCAGAGACAAGTCTTGCAGAGTACG...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGTCTGCATCAGATTCTaGGGCCGCTGGGTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVVCIRF*GRWVPA
Trigger: TGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGAC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGTCTGCATCAGATTCTaGGGCCGCTGGGTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIVCIRF*GRWVPA
Trigger: TGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGAC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGTCTGCATCAGATTCTaGGGCCGCTGGGTTCCGGCA +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEVCIRF*GRWVPA
Trigger: TGCCGGAACCCAGCGGCCCAAGAATCTGATGCAGAC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ACAGCTCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTCAGTTGTTAATTTCTaGGTTTCTTGGTCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: TALEELPVHPSATVTLEFSVVNF*VSWSPK
Trigger: CTTGGGAGACCAAGAAACCAAGAAATTAACAACTGA...AAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATTTTTCTGCTATGGCTaGCAGCCTTTCCTTGTGCAA +
Preference number: 5 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKFFCYG*QPFLVQ
Trigger: TTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAAA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGCTGCTCGTCAAGCTGTaGTCGCTTGCCTTCTATTTC +
Preference number: 5 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMLLVKL*SLAFYF
Trigger: GAAATAGAAGGCAAGCGACAACAGCTTGACGAGCAG...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATCGAAGCACTTTGGACTaGGAATGCTGCAGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDRSTLD*ECCSRS
Trigger: ACTTCTGCTGCAGCATTCCAAGTCCAAAGTGCTTCG...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCATTCTCCCGAAGCACTTaGGACTTGGAATGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: MERNAIHFMAAGENGVNAFSRST*DLECCS
Trigger: GCTGCAGCATTCCAAGTCCAAAGTGCTTCGGGAGAA...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp GAGGTCTACGTGAGTGGTGGAGAGTACAGGCTGCCCAGAAGAAAGGAGAAGAAAAATGTTATCTTCAAGTaGCTTGACTCTGAACTCATC +
Preference number: 5 (lower is better)
Translates to: EVYVSGGEYRLPRRKEKKNVIFK*LDSELI
Trigger: GATGAGTTCAGAGTCAAGCAACTTGAAGATAACATT...TTTCTTCTCCTTTCTTCTGGGCAGCCTGTACTCTCCACCACTCACGTAGACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000483909.5
CDS-3UTR CAA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACATCTAACTTAGCTTCTTaGCAGAGCATGTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: TIERETTADGQVMESVPTSNLAS*QSMCSL
Trigger: CAAGGAACACATGCTCTGCAAAGAAGCTAAGTTAGA...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGAACAAGGCTTGTGAATTaGCCTAAGTTTGGAGATCAA +
Preference number: 5 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRTRLVN*PKFGDQ
Trigger: TTGATCTCCAAACTTAGGCAAATTCACAAGCCTTGT...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGATCCATTGCAGCTGCTTaGATGAACTTGAGATTTAGA +
Preference number: 5 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRSIAAA*MNLRFR
Trigger: TCTAAATCTCAAGTTCATCAAAGCAGCTGCAATGGA...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp GCACCATCCATGATGAAGTGGGAGCATCATGGCAACCATTGTAGGTTGGACAGATGTGCTCTTGCTGTGTaGTACTATCCAATAGAACAA +
Preference number: 5 (lower is better)
Translates to: APSMMKWEHHGNHCRLDRCALAV*YYPIEQ
Trigger: TTGTTCTATTGGATAGTACAACACAGCAAGAGCACA...TCTGTCCAACCTACAATGGTTGCCATGATGCTCCCACTTCATCATGGATGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCAGGGACTTCAGGAATTaGACAGAAACTTGGGGGAAA +
Preference number: 5 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIRDFRN*TETWGK
Trigger: TTTCCCCCAAGTTTCTGTCAAATTCCTGAAGTCCCT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCAAGGGTCTTGATCTCTaGGGTAGTAGAAAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: ATYRIVWIRHCLVASVYIKGLDL*GSRKRP
Trigger: AGGCCTTTTTCTACTACCCAAGAGATCAAGACCCTT...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS TCA 90 bp TCAGCTGAAATTGTTTGCGAGCAGCAGAGAAATCTATCTGCTCTGTaGCAATGTCCTCCTTTGCTTTGTCAATCATGCTTGCGCGTTCAT +
Preference number: 5 (lower is better)
Translates to: SAEIVCEQQRNLSAL*QCPPLLCQSCLRVH
Trigger: ATGAACGCGCAAGCATGATTGACAAAGCAAAGGAGGACATTGTCACAGAGCAGATAGATTTCTCTGCTGCTCGCAAACAATTTCAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 90 bp CTACATCCTTTGTGCTTAATTTGTGCACTCCATTTTCTACTACGGTaGCTCCTGAGCGCACCTCATACACTACTTTGGTACCATCATCAT +
Preference number: 5 (lower is better)
Translates to: LHPLCLICALHFLLR*LLSAPHTLLWYHHH
Trigger: ATGATGATGGTACCAAAGTAGTGTATGAGGTGCGCTCAGGAGGCACCGTAGTAGAAAATGGAGTGCACAAATTAAGCACAAAGGATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS-3UTR CAA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTTGGGGGAATGGCCATTaGTTCTTTCTGCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTWGNGH*FFLPLP
Trigger: TGGCAGAGGCAGAAAGAACAAATGGCCATTCCCCCA...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTAGCTTGGAGGGCTTCTaGTCCTCATGGAAGGCACGC +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVSLEGF*SSWKAR
Trigger: GCGTGCCTTCCATGAGGACAAGAAGCCCTCCAAGCT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGAGCTTGGAGGGCTTCTaGTCCTCATGGAAGGCACGC +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAESLEGF*SSWKAR
Trigger: GCGTGCCTTCCATGAGGACAAGAAGCCCTCCAAGCT...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAATCATCCTCAAAGAGCTaGGAGGGCTTCTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: KCRRSGIITASSGQIWRESSSKS*EGFLSS
Trigger: TGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATGA...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGATGCCAGGATTCTTCTaGACGGCCTGGCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEMPGFF*TAWLRM
Trigger: CATCCGCAGCCAGGCCGTCAAGAAGAATCCTGGCAT...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TACAAAACCGCTCAAAACTTTGTAATTGTGACTCATGCAAATACCTTGTTAGGTATGCCAGGATTCTTCTaGACGGCCTGGCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: YKTAQNFVIVTHANTLLGMPGFF*TAWLRM
Trigger: CATCCGCAGCCAGGCCGTCAAGAAGAATCCTGGCAT...ACCTAACAAGGTATTTGCATGAGTCACAATTACAAAGTTTTGAGCGGTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTATGCCAGGATTCTTCTaGACGGCCTGGCTGCGGATG +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVMPGFF*TAWLRM
Trigger: CATCCGCAGCCAGGCCGTCAAGAAGAATCCTGGCAT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCACGCTCCTTGTACTTTTaGTGCGACTCCAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: MERNAIHFMAAGENGVNARSLYF*CDSRCS
Trigger: GGAACATCTGGAGTCGCACAAAAAGTACAAGGAGCG...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTCATCACGTCAGATTCTaGAGTGGCCAGGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVHHVRF*SGQEGG
Trigger: GCCTCCCTCCTGGCCACTCAAGAATCTGACGTGATG...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCATCACGTCAGATTCTaGAGTGGCCAGGAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEHHVRF*SGQEGG
Trigger: GCCTCCCTCCTGGCCACTCAAGAATCTGACGTGATG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTGTGATGGGGCATTCTTaGTCCTGGGGCTCTGCGTAC +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVVMGHS*SWGSAY
Trigger: GTACGCAGAGCCCCAGGACAAAGAATGCCCCATCAC...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCAAGACGCTTCCTGGGTaGAAGGAAGTTTATTCGTTG +
Preference number: 5 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSKTLPG*KEVYSL
Trigger: CAACGAATAAACTTCCTTCAACCCAGGAAGCGTCTT...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATAAAAGTCCTTTCTCTTTaGATTCCTGGGTGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SGGITCTPKCHGHSGILIKVLSL*IPGCPE
Trigger: CTCTGGACACCCAGGAATCAAAAGAGAAAGGACTTT...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTTCGTGAACAGAGGATaGGCAGGTCGGGAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVFVNRG*AGREAG
Trigger: CCCAGCTTCCCGACCTGCCAATCCTCTGTTCACGAA...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTTTCGTGAACAGAGGATaGGCAGGTCGGGAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPFVNRG*AGREAG
Trigger: CCCAGCTTCCCGACCTGCCAATCCTCTGTTCACGAA...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAAGCTGGGGAGGCTTCTaGATAGTCATGTCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLISWGGF*IVMSGP
Trigger: CGGCCCAGACATGACTATCAAGAAGCCTCCCCAGCT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTAGCTGGGGAGGCTTCTaGATAGTCATGTCTGGGCCG +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVSWGGF*IVMSGP
Trigger: CGGCCCAGACATGACTATCAAGAAGCCTCCCCAGCT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGTGGCCCTACCACCATaGTCCTTCATCGCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEVALPP*SFIAQR
Trigger: TCTCTGGGCGATGAAGGACAATGGTGGTAGGGCCAC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATGTCATTGTCTAGGGTGAGCAGCATGCATGGGTATGAAGAGGCAAGTAAACTGCCTGAAACACACTGGTaGCTCAGCAAAAATAGTATC +
Preference number: 5 (lower is better)
Translates to: MSLSRVSSMHGYEEASKLPETHW*LSKNSI
Trigger: GATACTATTTTTGCTGAGCAACCAGTGTGTTTCAGG...CAGTTTACTTGCCTCTTCATACCCATGCATGCTGCTCACCCTAGACAATGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGACAAGGCTTGTGAATTaGCCTAAGTTTGGAGATCAA +
Preference number: 5 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQTRLVN*PKFGDQ
Trigger: TTGATCTCCAAACTTAGGCAAATTCACAAGCCTTGT...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGTACATATGTGGCTTTTaGCTTTGGGGGAGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMYICGF*LWGSAE
Trigger: CTCAGCACTCCCCCAAAGCAAAAAGCCACATATGTA...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGAGGCTGTCCAGATCTTaGATGCAGAAAGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMRLSRS*MQKVCS
Trigger: ACTGCAGACTTTCTGCATCAAAGATCTGGACAGCCT...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCGCTCCTTGTACTTTTaGTGCGACTCCAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTRSLYF*CDSRCS
Trigger: GGAACATCTGGAGTCGCACAAAAAGTACAAGGAGCG...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTCTCTCTTTGCGCTCCTaGTACTTTTTGTGCGACTCC +
Preference number: 5 (lower is better)
Translates to: RVQILYVYILPHPIIKIVLSLRS*YFLCDS
Trigger: GGAGTCGCACAAAAAGTACAAGGAGCGCAAAGAGAG...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAACTTTGTCAATCATGCTaGCGCGTTCATGAGAAGAGG +
Preference number: 5 (lower is better)
Translates to: KCRRSGIITASSGQIWRELCQSC*RVHEKR
Trigger: CCTCTTCTCATGAACGCGCAAGCATGATTGACAAAG...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCACTCCATCAGCTGAAATaGTTTGCGAGCAGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: MERNAIHFMAAGENGVNALHQLK*FASSRE
Trigger: TTCTCTGCTGCTCGCAAACAATTTCAGCTGATGGAG...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAACTCCATCAGCTGAAATaGTTTGCGAGCAGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: KCRRSGIITASSGQIWRELHQLK*FASSRE
Trigger: TTCTCTGCTGCTCGCAAACAATTTCAGCTGATGGAG...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTAGAGTCAAGCTCCTCTaGGGTCAAGGAGACATTGAC +
Preference number: 5 (lower is better)
Translates to: RVQILYVYILPHPIIKIVRVKLL*GQGDID
Trigger: GTCAATGTCTCCTTGACCCAAGAGGAGCTTGACTCT...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGCATTGGTTGTCTCATaGGATGCCCCGCTGTCACTG +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEALVVS*DAPLSL
Trigger: CAGTGACAGCGGGGCATCCAATGAGACAACCAATGC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAACTCGGCTATGGCTTGTaGAATGGCATTCTGCACCAG +
Preference number: 5 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQLGYGL*NGILHQ
Trigger: CTGGTGCAGAATGCCATTCAACAAGCCATAGCCGAG...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATTCCTGGACCTCAGCTaGAAAGGCCCAACCATCACG +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIFLDLS*KGPTIT
Trigger: CGTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGAA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTTCCTGGACCTCAGCTaGAAAGGCCCAACCATCACG +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVFLDLS*KGPTIT
Trigger: CGTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGAA...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTTGGATCCATTGTAGATaGGCCCCAAACCAGACACTG +
Preference number: 5 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTWIHCR*APNQTL
Trigger: CAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GCTACATACAGAATAGTTTGGATCAGGCATTGCCTGGTGGCCTCTGTGTATATCTTATCTTCAAGTTGCTaGACTCTGAACTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: ATYRIVWIRHCLVASVYILSSSC*TLNSSS
Trigger: AGAGGATGAGTTCAGAGTCAAGCAACTTGAAGATAA...GATATACACAGAGGCCACCAGGCAATGCCTGATCCAAACTATTCTGTATGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp TGGATCCATTGTAGATTGGCCCCAAACCAGACACTGGGATTGAGTCACCAAAAATTATCTTCAAGTTGCTaGACTCTGAACTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: WIHCRLAPNQTLGLSHQKLSSSC*TLNSSS
Trigger: AGAGGATGAGTTCAGAGTCAAGCAACTTGAAGATAA...TTTTTGGTGACTCAATCCCAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp CAGGAAAGAATGTTCCAGAACCCTGCAAAGAATAGAACTCTTCCCACCTGCCAGAATGTTATCTTCAAGTaGCTTGACTCTGAACTCATC +
Preference number: 5 (lower is better)
Translates to: QERMFQNPAKNRTLPTCQNVIFK*LDSELI
Trigger: GATGAGTTCAGAGTCAAGCAACTTGAAGATAACATT...CTGGCAGGTGGGAAGAGTTCTATTCTTTGCAGGGTTCTGGAACATTCTTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTACAGCGCTTTTTCTTTaGGGTACCTGGGGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVTALFL*GTWGWL
Trigger: GAGCCAGCCCCAGGTACCCAAAAGAAAAAGCGCTGT...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp TATAGAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTACATATGTGGCTTTTaGCTTTGGGGGAGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: YRKLNLPTKAYLETLDLMYICGF*LWGSAE
Trigger: CTCAGCACTCCCCCAAAGCAAAAAGCCACATATGTA...CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTCTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAAACACAGATACGTGTTaGGTTGGTAGACGGGCAGAA +
Preference number: 5 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLNTDTC*VGRRAE
Trigger: TTCTGCCCGTCTACCAACCAAACACGTATCTGTGTT...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTCAAGTGACAGGCCCTTaGTTCATGCCCCCAAGGCTT +
Preference number: 5 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWAQVTGP*FMPPRL
Trigger: AAGCCTTGGGGGCATGAACAAAGGGCCTGTCACTTG...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp ACCATAGAAAGAGAGACAACCGCTGATGGGCAGGTTATGGAATCAGTCCCTACAGATAGTTTCTGGGCTTaGCTTGCATTTAAAATAGCT +
Preference number: 5 (lower is better)
Translates to: TIERETTADGQVMESVPTDSFWA*LAFKIA
Trigger: AGCTATTTTAAATGCAAGCAAAGCCCAGAAACTATC...TGTAGGGACTGATTCCATAACCTGCCCATCAGCGGTTGTCTCTCTTTCTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp TGGCCTCTGTGTATATCAAGACCTGTCATTGCAAAACTAAGTGACTGGATGTCTAACCCCTGTATGATTTaGACTCTCCTAAGTCAGGAG +
Preference number: 5 (lower is better)
Translates to: WPLCISRPVIAKLSDWMSNPCMI*TLLSQE
Trigger: CTCCTGACTTAGGAGAGTCAAAATCATACAGGGGTT...AGACATCCAGTCACTTAGTTTTGCAATGACAGGTCTTGATATACACAGAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGCAGAATCACAGCAGTaGGCCTCTAGCACCTCATCT +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIAESQQ*ASSTSS
Trigger: AGATGAGGTGCTAGAGGCCAACTGCTGTGATTCTGC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TACAAAACCGCTCAAAACTTTGTAATTGTGACTCATGCAAATACCTTGTTAGGTGCAGAATCACAGCAGTaGGCCTCTAGCACCTCATCT +
Preference number: 5 (lower is better)
Translates to: YKTAQNFVIVTHANTLLGAESQQ*ASSTSS
Trigger: AGATGAGGTGCTAGAGGCCAACTGCTGTGATTCTGC...ACCTAACAAGGTATTTGCATGAGTCACAATTACAAAGTTTTGAGCGGTTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGGGGAGGATGTTCCATaGTACGTTCCATCCACAGCA +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEGEDVP*YVPSTA
Trigger: TGCTGTGGATGGAACGTACAATGGAACATCCTCCCC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATGGGGGAATGGCCATTaGTTCTTTCTGCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIWGNGH*FFLPLP
Trigger: TGGCAGAGGCAGAAAGAACAAATGGCCATTCCCCCA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGCACGCAGCTCAAACTaGGCCTCCTTTTTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEARSSN*ASFFSV
Trigger: CACACTGAAAAAGGAGGCCAAGTTTGAGCTGCGTGC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCTCCATCAGCTGAAATaGTTTGCGAGCAGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTLHQLK*FASSRE
Trigger: TTCTCTGCTGCTCGCAAACAATTTCAGCTGATGGAG...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAGGATTAGTCAGTGGCTaGTCTGAGTTGACTGACCCC +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIGLVSG*SELTDP
Trigger: GGGGTCAGTCAACTCAGACAAGCCACTGACTAATCC...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTCTCGGCTATGGCTTGTaGAATGGCATTCTGCACCAG +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVLGYGL*NGILHQ
Trigger: CTGGTGCAGAATGCCATTCAACAAGCCATAGCCGAG...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACTGCTCGGCTATGGCTaGTTGAATGGCATTCTGCAC +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLILLGYG*LNGILH
Trigger: GTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACCATCCCTGCTGGTTTaGGACACAGCTTTATCCACC +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIPSLLV*DTALST
Trigger: GGTGGATAAAGCTGTGTCCAAAACCAGCAGGGATGG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTCCATCCCTGCTGGTTTaGGACACAGCTTTATCCACC +
Preference number: 5 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFPSLLV*DTALST
Trigger: GGTGGATAAAGCTGTGTCCAAAACCAGCAGGGATGG...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACGTACTCTGCAAGACTaGTCTCTGCCTCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIRTLQD*SLPLQL
Trigger: GAGCTGAAGAGGCAGAGACAAGTCTTGCAGAGTACG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAAAGACGCTTCCTGGGTaGAAGGAAGTTTATTCGTTG +
Preference number: 5 (lower is better)
Translates to: KCRRSGIITASSGQIWREKTLPG*KEVYSL
Trigger: CAACGAATAAACTTCCTTCAACCCAGGAAGCGTCTT...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCTCAGTTGTTAATTTCTaGGTTTCTTGGTCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSSVVNF*VSWSPK
Trigger: CTTGGGAGACCAAGAAACCAAGAAATTAACAACTGA...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCAAAAGTCCTTTCTCTTTaGATTCCTGGGTGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: MERNAIHFMAAGENGVNAKVLSL*IPGCPE
Trigger: CTCTGGACACCCAGGAATCAAAAGAGAAAGGACTTT...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAATGGATCCATTGTAGATaGGCCCCAAACCAGACACTG +
Preference number: 5 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQWIHCR*APNQTL
Trigger: CAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTTTCTCCCGAAGCACTTaGGACTTGGAATGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVFSRST*DLECCS
Trigger: GCTGCAGCATTCCAAGTCCAAAGTGCTTCGGGAGAA...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAAGGATGATTTGCTCTTaGGCAGATATCTGGGACTCT +
Preference number: 5 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLRMICS*ADIWDS
Trigger: AGAGTCCCAGATATCTGCCAAAGAGCAAATCATCCT...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATCTTGGTCTCTCCTGTTaGTTTGTCTTTCTCCACATT +
Preference number: 5 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDLGLSC*FVFLHI
Trigger: AATGTGGAGAAAGACAAACAAACAGGAGAGACCAAG...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTTCTAACTTAGCTTCTTaGCAGAGCATGTGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SLTPSEMLKLKISPTTYISNLAS*QSMCSL
Trigger: CAAGGAACACATGCTCTGCAAAGAAGCTAAGTTAGA...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp GAGACATCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTGTGTTAATACAGCTTaGGAATACAACCTGCGTTTT +
Preference number: 5 (lower is better)
Translates to: ETSLTPSEMLKLKISPTTCVNTA*EYNLRF
Trigger: AAAACGCAGGTTGTATTCCAAAGCTGTATTAACACA...GGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGATGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATTTGAGTCCATCTCTCTaGCTTTTTCAAGCAATGCCA +
Preference number: 5 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDLSPSL*LFQAMP
Trigger: TGGCATTGCTTGAAAAAGCAAGAGAGATGGACTCAA...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTTTGCCTAGCCTGGTCTaGAACTTCTGGGCTCACACT +
Preference number: 5 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWALPSLV*NFWAHT
Trigger: AGTGTGAGCCCAGAAGTTCAAGACCAGGCTAGGCAA...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGGTGGGGTTAACAAGCTaGTGTGCTATTTGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEVGLTS*CAIWGW
Trigger: CCACCCCCAAATAGCACACAAGCTTGTTAACCCCAC...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAAACCTCGGAAGTCACCTaGCAAGACAGTAACTTAGAA +
Preference number: 5 (lower is better)
Translates to: KCRRSGIITASSGQIWRETSEVT*QDSNLE
Trigger: TTCTAAGTTACTGTCTTGCAAGGTGACTTCCGAGGT...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTCATCCTCAAAGAGCTaGGAGGGCTTCTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAESSSKS*EGFLSS
Trigger: TGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATGA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTCATCCTCAAAGAGCTaGGAGGGCTTCTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFSSSKS*EGFLSS
Trigger: TGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATGA...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TCTGGAGGAATTACCTGTACACCCAAGTGCCACGGTCACTCTGGAATTTTAATATTTTCTAATGCAGTATaGTTCTTTCTCATGCTCGTC +
Preference number: 5 (lower is better)
Translates to: SGGITCTPKCHGHSGILIFSNAV*FFLMLV
Trigger: GACGAGCATGAGAAAGAACAATACTGCATTAGAAAA...TATTAAAATTCCAGAGTGACCGTGGCACTTGGGTGTACAGGTAATTCCTCCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACGCTCCTTGTACTTTTaGTGCGACTCCAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIRSLYF*CDSRCS
Trigger: GGAACATCTGGAGTCGCACAAAAAGTACAAGGAGCG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACTCTCTTTGCGCTCCTaGTACTTTTTGTGCGACTCC +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLILSLRS*YFLCDS
Trigger: GGAGTCGCACAAAAAGTACAAGGAGCGCAAAGAGAG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCTCTCTTTGCGCTCCTaGTACTTTTTGTGCGACTCC +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAELSLRS*YFLCDS
Trigger: GGAGTCGCACAAAAAGTACAAGGAGCGCAAAGAGAG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTAGAGTCAAGCTCCTCTaGGGTCAAGGAGACATTGAC +
Preference number: 5 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFRVKLL*GQGDID
Trigger: GTCAATGTCTCCTTGACCCAAGAGGAGCTTGACTCT...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GAACTCTGTTATTCTTTAAGCAATAAGTGCTCTGGTTCAATCAACTGTGGTCAATCCATGCTGAAATCATaGGATAGGGTCTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: ELCYSLSNKCSGSINCGQSMLKS*DRVSRT
Trigger: AGTCCTGGAGACCCTATCCAATGATTTCAGCATGGA...TTGACCACAGTTGATTGAACCAGAGCACTTATTGCTTAAAGAATAACAGAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTGGATCCATTGTAGATaGGCCCCAAACCAGACACTG +
Preference number: 5 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFWIHCR*APNQTL
Trigger: CAGTGTCTGGTTTGGGGCCAATCTACAATGGATCCA...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTCTGCTCGTCAAGCTGTaGTCGCTTGCCTTCTATTTC +
Preference number: 5 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPLLVKL*SLAFYF
Trigger: GAAATAGAAGGCAAGCGACAACAGCTTGACGAGCAG...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp AGAGTATGGATGCAAGGCTTTGTAATCAACTGGGGAGGAGATGAACAGTTAATGTTATCTTCAAGTTGCTaGACTCTGAACTCATCCTCT +
Preference number: 5 (lower is better)
Translates to: RVWMQGFVINWGGDEQLMLSSSC*TLNSSS
Trigger: AGAGGATGAGTTCAGAGTCAAGCAACTTGAAGATAA...CATTAACTGTTCATCTCCTCCCCAGTTGATTACAAAGCCTTGCATCCATACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp GAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCCCCCATCCAATGTTATCTTCAAGTaGCTTGACTCTGAACTCATC +
Preference number: 5 (lower is better)
Translates to: EPSCSTRTDSIRVYTPPSNVIFK*LDSELI
Trigger: GATGAGTTCAGAGTCAAGCAACTTGAAGATAACATT...GGATGGGGGAGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp ATGGAGAGAAACGCCATTCATTTTATGGCTGCTGGAGAAAATGGAGTTAATGCACCTGAAACACACTGGTaGCTCAGCAAAAATAGTATC +
Preference number: 5 (lower is better)
Translates to: MERNAIHFMAAGENGVNAPETHW*LSKNSI
Trigger: GATACTATTTTTGCTGAGCAACCAGTGTGTTTCAGG...TGCATTAACTCCATTTTCTCCAGCAGCCATAAAATGAATGGCGTTTCTCTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp GTAATCAACTGGGGAGGAGATGAACAGTTAATGCATTACAGCACCATCCATGATAGATTGTCCAAGACATaGAAACTGTTTTCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: VINWGGDEQLMHYSTIHDRLSKT*KLFSPS
Trigger: AGAGGGAGAAAACAGTTTCAATGTCTTGGACAATCT...ATCATGGATGGTGCTGTAATGCATTAACTGTTCATCTCCTCCCCAGTTGATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTCTCACATTGAATAGCTaGAATCTCCAAGTGAGTAGA +
Preference number: 5 (lower is better)
Translates to: SLTPSEMLKLKISPTTYILTLNS*NLQVSR
Trigger: TCTACTCACTTGGAGATTCAAGCTATTCAATGTGAG...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTATCTGTCCTGGAAGATaGATTCTGTTTATCAACCAG +
Preference number: 5 (lower is better)
Translates to: SLTPSEMLKLKISPTTYIICPGR*ILFINQ
Trigger: CTGGTTGATAAACAGAATCAATCTTCCAGGACAGAT...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp TCACTCACCCCGAGTGAGATGCTAAAGCTGAAAATTTCACCAACAACCTACATTGCAGGGTGTAAAATTTaGCAGGCTTATATGAGAACA +
Preference number: 5 (lower is better)
Translates to: SLTPSEMLKLKISPTTYIAGCKI*QAYMRT
Trigger: TGTTCTCATATAAGCCTGCAAAATTTTACACCCTGC...AATGTAGGTTGTTGGTGAAATTTTCAGCTTTAGCATCTCACTCGGGGTGAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGTTTTCTAATGCAGTATaGTTCTTTCTCATGCTCGTC +
Preference number: 5 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRFSNAV*FFLMLV
Trigger: GACGAGCATGAGAAAGAACAATACTGCATTAGAAAA...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACTTTGTCAATCATGCTaGCGCGTTCATGAGAAGAGG +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLILCQSC*RVHEKR
Trigger: CCTCTTCTCATGAACGCGCAAGCATGATTGACAAAG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTATGTCCTCCTTTGCTTaGTCAATCATGCTTGCGCGT +
Preference number: 5 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFMSSFA*SIMLAR
Trigger: ACGCGCAAGCATGATTGACAAAGCAAAGGAGGACAT...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAATGTCCTCCTTTGCTTaGTCAATCATGCTTGCGCGT +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIMSSFA*SIMLAR
Trigger: ACGCGCAAGCATGATTGACAAAGCAAAGGAGGACAT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTCCATGCTGAAATCATaGGATAGGGTCTCCAGGACT +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAESMLKS*DRVSRT
Trigger: AGTCCTGGAGACCCTATCCAATGATTTCAGCATGGA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CGCGTACAGATTCTATACGTGTATATACTCCCCCATCCCATCATAAAAATAGTTCAGCAGGCAGAATCTTaGGTAATACATCCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: RVQILYVYILPHPIIKIVQQAES*VIHPFS
Trigger: AGAAAAGGGATGTATTACCAAAGATTCTGCCTGCTG...AACTATTTTTATGATGGGATGGGGGAGTATATACACGTATAGAATCTGTACGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp CACCATCTTGAACCAAGTTGTTCAACGCGTACAGATTCTATACGTGTATATACTCAGCAGGCAGAATCTTaGGTAATACATCCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: HHLEPSCSTRTDSIRVYTQQAES*VIHPFS
Trigger: AGAAAAGGGATGTATTACCAAAGATTCTGCCTGCTG...AGTATATACACGTATAGAATCTGTACGCGTTGAACAACTTGGTTCAAGATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAATCAGTTGTTAATTTCTaGGTTTCTTGGTCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: KCRRSGIITASSGQIWRESVVNF*VSWSPK
Trigger: CTTGGGAGACCAAGAAACCAAGAAATTAACAACTGA...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTCAAGCTGTTGTCGCTaGCCTTCTATTTCAGTCTGC +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAESSCCR*PSISVC
Trigger: GCAGACTGAAATAGAAGGCAAGCGACAACAGCTTGA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTTCAAGCTGTTGTCGCTaGCCTTCTATTTCAGTCTGC +
Preference number: 5 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPSSCCR*PSISVC
Trigger: GCAGACTGAAATAGAAGGCAAGCGACAACAGCTTGA...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATATCAAGCTGTTGTCGCTaGCCTTCTATTTCAGTCTGC +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLISSCCR*PSISVC
Trigger: GCAGACTGAAATAGAAGGCAAGCGACAACAGCTTGA...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS-3UTR CAA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTTCAAGCTGTTGTCGCTaGCCTTCTATTTCAGTCTGC +
Preference number: 5 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVSSCCR*PSISVC
Trigger: GCAGACTGAAATAGAAGGCAAGCGACAACAGCTTGA...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp GAAAGCTCAATCTTCCAACCAAGGCCTATTTGGAAACACTGGATCTCATGTAATTCCATTGCAGCTGCTTaGATGAACTTGAGATTTAGA +
Preference number: 5 (lower is better)
Translates to: ESSIFQPRPIWKHWISCNSIAAA*MNLRFR
Trigger: TCTAAATCTCAAGTTCATCAAAGCAGCTGCAATGGA...ATTACATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGGAAGATTGAGCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTCCAACCAAGGCCTATTaGGAAACACTGGATCTCATG +
Preference number: 5 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPPTKAY*ETLDLM
Trigger: CATGAGATCCAGTGTTTCCAAATAGGCCTTGGTTGG...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp AGCAGTAATCCGGAAGGCAGCATAGGAGTAATAGCAAAAGTTAAGAGATGTAGGTTCTCATGGCCAGAATaGAAAATTTTCTCATCCAGA +
Preference number: 5 (lower is better)
Translates to: SSNPEGSIGVIAKVKRCRFSWPE*KIFSSR
Trigger: TCTGGATGAGAAAATTTTCAATTCTGGCCATGAGAA...CCTACATCTCTTAACTTTTGCTATTACTCCTATGCTGCCTTCCGGATTACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGACGGCTTATATGTCATaGTCTAGGGTGAGCAGCATG +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAETAYMS*SRVSSM
Trigger: CATGCTGCTCACCCTAGACAATGACATATAAGCCGT...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp AAATGTAGGAGAAGTGGAATCATAACTGCCTCTTCTGGGCAAATATGGAGAGAATTTTCTAATGCAGTATaGTTCTTTCTCATGCTCGTC +
Preference number: 5 (lower is better)
Translates to: KCRRSGIITASSGQIWREFSNAV*FFLMLV
Trigger: GACGAGCATGAGAAAGAACAATACTGCATTAGAAAA...TTCTCTCCATATTTGCCCAGAAGAGGCAGTTATGATTCCACTTCTCCTACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGAAGACGCTTCCTGGGTaGAAGGAAGTTTATTCGTTG +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEKTLPG*KEVYSL
Trigger: CAACGAATAAACTTCCTTCAACCCAGGAAGCGTCTT...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAAAGACGCTTCCTGGGTaGAAGGAAGTTTATTCGTTG +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIKTLPG*KEVYSL
Trigger: CAACGAATAAACTTCCTTCAACCCAGGAAGCGTCTT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGAAAGTCCTTTCTCTTTaGATTCCTGGGTGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEKVLSL*IPGCPE
Trigger: CTCTGGACACCCAGGAATCAAAAGAGAAAGGACTTT...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTAAAGTCCTTTCTCTTTaGATTCCTGGGTGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVKVLSL*IPGCPE
Trigger: CTCTGGACACCCAGGAATCAAAAGAGAAAGGACTTT...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTTTTTTCTGCTATGGCTaGCAGCCTTTCCTTGTGCAA +
Preference number: 5 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWAFFCYG*QPFLVQ
Trigger: TTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAAA...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTTTTTTCTGCTATGGCTaGCAGCCTTTCCTTGTGCAA +
Preference number: 5 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVFFCYG*QPFLVQ
Trigger: TTGCACAAGGAAAGGCTGCAAGCCATAGCAGAAAAA...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp CAAAATATTCAGGAGACTCAACCATATAAAGATGGTGCCAATTGCCCATGTGCTAATGTTATCTTCAAGTaGCTTGACTCTGAACTCATC +
Preference number: 5 (lower is better)
Translates to: QNIQETQPYKDGANCPCANVIFK*LDSELI
Trigger: GATGAGTTCAGAGTCAAGCAACTTGAAGATAACATT...AGCACATGGGCAATTGGCACCATCTTTATATGGTTGAGTCTCCTGAATATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374530.7
CDS-3UTR CAA 90 bp CATAATCACAGCTCCATGTACACTATCATCATGAAGGGTAGTTACTTGCTGCTAAATGTTATCTTCAAGTaGCTTGACTCTGAACTCATC +
Preference number: 5 (lower is better)
Translates to: HNHSSMYTIIMKGSYLLLNVIFK*LDSELI
Trigger: GATGAGTTCAGAGTCAAGCAACTTGAAGATAACATT...TAGCAGCAAGTAACTACCCTTCATGATGATAGTGTACATGGAGCTGTGATTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTAGGATGATTTGCTCTTaGGCAGATATCTGGGACTCT +
Preference number: 5 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVRMICS*ADIWDS
Trigger: AGAGTCCCAGATATCTGCCAAAGAGCAAATCATCCT...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTAACTGTGTTTTAGGTTaGGCCATAAGGGCATTCCCT +
Preference number: 5 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWANCVLG*AIRAFP
Trigger: AGGGAATGCCCTTATGGCCAAACCTAAAACACAGTT...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCAGCAGGCAGAATCTTaGGTAATACATCCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEQQAES*VIHPFS
Trigger: AGAAAAGGGATGTATTACCAAAGATTCTGCCTGCTG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATACCTGAAACACACTGGTaGCTCAGCAAAAATAGTATC +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLIPETHW*LSKNSI
Trigger: GATACTATTTTTGCTGAGCAACCAGTGTGTTTCAGG...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGCCTGAAACACACTGGTaGCTCAGCAAAAATAGTATC +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEPETHW*LSKNSI
Trigger: GATACTATTTTTGCTGAGCAACCAGTGTGTTTCAGG...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTCATGACAACACAGCATaGACAGCGCTTTTTCTTTTG +
Preference number: 5 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPHDNTA*TALFLL
Trigger: CAAAAGAAAAAGCGCTGTCAATGCTGTGTTGTCATG...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp TTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTCAGTTGTTAATTTCTaGGTTTCTTGGTCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: FHHCILQLLVYIRIAEFVSVVNF*VSWSPK
Trigger: CTTGGGAGACCAAGAAACCAAGAAATTAACAACTGA...AACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AATTATCTGTCCTGGAAGATTGATTCTGTTTATCAACCAGCAAGCTTAAAGGTTAGATTGTCCAAGACATaGAAACTGTTTTCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: NYLSWKIDSVYQPASLKVRLSKT*KLFSPS
Trigger: AGAGGGAGAAAACAGTTTCAATGTCTTGGACAATCT...AACCTTTAAGCTTGCTGGTTGATAAACAGAATCAATCTTCCAGGACAGATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTCTCACATTGAATAGCTaGAATCTCCAAGTGAGTAGA +
Preference number: 5 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPLTLNS*NLQVSR
Trigger: TCTACTCACTTGGAGATTCAAGCTATTCAATGTGAG...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTATCTGTCCTGGAAGATaGATTCTGTTTATCAACCAG +
Preference number: 5 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPICPGR*ILFINQ
Trigger: CTGGTTGATAAACAGAATCAATCTTCCAGGACAGAT...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp ATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTGTTTGCACTTTAATAAACTGTATACTTGCATaGAATGCCTCACAATCACTC +
Preference number: 5 (lower is better)
Translates to: ILQLLVYIRIAEFVCTLINCILA*NASQSL
Trigger: GAGTGATTGTGAGGCATTCAATGCAAGTATACAGTT...TATTAAAGTGCAAACAAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGAACTGTATACTTGCATaGAATGCCTCACAATCACTC +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAENCILA*NASQSL
Trigger: GAGTGATTGTGAGGCATTCAATGCAAGTATACAGTT...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS-3UTR CAA 90 bp CATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTTTTTTCTAATGCAGTATaGTTCTTTCTCATGCTCGTC +
Preference number: 5 (lower is better)
Translates to: HFHHCILQLLVYIRIAEFFSNAV*FFLMLV
Trigger: GACGAGCATGAGAAAGAACAATACTGCATTAGAAAA...AAACTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATG
36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
CDS-3UTR CAA 90 bp AAGTTTGGAGATCAATTGCTACTGATGCTTCAAACAATGTTTGTTTCATGTCCTTCCTTTGTGCTTAATTaGTGCACTCCATTTTCTACT +
Preference number: 5 (lower is better)
Translates to: KFGDQLLLMLQTMFVSCPSFVLN*CTPFST
Trigger: AGTAGAAAATGGAGTGCACAAATTAAGCACAAAGGA...AGGACATGAAACAAACATTGTTTGAAGCATCAGTAGCAATTGATCTCCAAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374531.6
CDS-3UTR CAA 90 bp TGGCAATTACTCCTTAAATATGTGAAAGATTTGGACTTTGATAGTTTCTGGGCTCATCTGCGTTTTATATaGGCAGGGCTAATATTTCTT +
Preference number: 5 (lower is better)
Translates to: WQLLLKYVKDLDFDSFWAHLRFI*AGLIFL
Trigger: AAGAAATATTAGCCCTGCCAATATAAAACGCAGATG...AGCCCAGAAACTATCAAAGTCCAAATCTTTCACATATTTAAGGAGTAATTGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314527.9
CDS-3UTR CAA 90 bp TTTCATTTTCATCATTGTATATTGCAGCTTCTGGTCTACATAAGGATTGCTGAGTTCTCATGGCCAGAATaGAAAATTTTCTCATCCAGA +
Preference number: 5 (lower is better)
Translates to: FHFHHCILQLLVYIRIAEFSWPE*KIFSSR
Trigger: TCTGGATGAGAAAATTTTCAATTCTGGCCATGAGAA...CTCAGCAATCCTTATGTAGACCAGAAGCTGCAATATACAATGATGAAAATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000374530.7
CDS GCA 72 bp GCCATCTCCATCGCGGGGCTCCGCGGCCGGGTGCGCTaGTGCGGGGCTCACCGGCGCTGCTCGCCTCTCCCG +
Preference number: 6 (lower is better)
Translates to: AISIAGLRGRVR*CGAHRRCSPLP
Trigger: CGGGAGAGGCGAGCAGCGCCGGTGAGCCCCGCAGCAGCGCACCCGGCCGCGGAGCCCCGCGATGGAGATGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374531.6
CDS CCA 72 bp GGCTTCTCTGGGCGCCCGCTCCCGGGGGCGCAGTCCTaGGGTTCTGCTCCAGTCCAGCGCCGCGCGGCCGCT +
Preference number: 6 (lower is better)
Translates to: GFSGRPLPGAQS*GSAPVQRRAAA
Trigger: AGCGGCCGCGCGGCGCTGGACTGGAGCAGAACCCCAGGACTGCGCCCCCGGGAGCGGGCGCCCAGAGAAGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374525.5
ENST00000434623.6
CDS CCA 72 bp TTTCCCTCTGGGCGCCCGCTCCCGGGGGCGCAGTCCTaGGGTTCTGCTCCAGTCCAGCGCCGCGCGGCCGCT +
Preference number: 6 (lower is better)
Translates to: FPSGRPLPGAQS*GSAPVQRRAAA
Trigger: AGCGGCCGCGCGGCGCTGGACTGGAGCAGAACCCCAGGACTGCGCCCCCGGGAGCGGGCGCCCAGAGGGAAA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495980.1
CDS CCA 72 bp GCTTTGCTAGAACCCGGGAGAACGCCCAGGGACGGCTaGGGATCCGCTCCAGGGGCGGCGGGCAGAGCTGTG +
Preference number: 6 (lower is better)
Translates to: ALLEPGRTPRDG*GSAPGAAGRAV
Trigger: CACAGCTCTGCCCGCCGCCCCTGGAGCGGATCCCCAGCCGTCCCTGGGCGTTCTCCCGGGTTCTAGCAAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314527.9
ENST00000374530.7
CDS CCA 72 bp TCCAAGTTTGCCTCCGGCCCTGCAGCGCTGGGGGCTTaGGCCTGCTGCCCTGGGTTCCCGGAAGAATGGTCT +
Preference number: 6 (lower is better)
Translates to: SKFASGPAALGA*ACCPGFPEEWS
Trigger: AGACCATTCTTCCGGGAACCCAGGGCAGCAGGCCCAAGCCCCCAGCGCTGCAGGGCCGGAGGCAAACTTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS TCA 72 bp CTCCAGGGCACCGGGGGATTTCTGTCCCTTGGCGGCTaGGGCACCACTGTCTTCTGGAGGTCCCCCGACAGA +
Preference number: 6 (lower is better)
Translates to: LQGTGGFLSLGG*GTTVFWRSPDR
Trigger: TCTGTCGGGGGACCTCCAGAAGACAGTGGTGCCTCAGCCGCCAAGGGACAGAAATCCCCCGGTGCCCTGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CCA 72 bp ATGGGGTCTCCAGGGCACCGGGGGATTTCTGTCCCTTaGCGGCTGAGGCACCACTGTCTTCTGGAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: MGSPGHRGISVP*RLRHHCLLEVP
Trigger: GGGGACCTCCAGAAGACAGTGGTGCCTCAGCCGCCAAGGGACAGAAATCCCCCGGTGCCCTGGAGACCCCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 72 bp GATGGGGTCTCCAGGGCACCGGGGGATTTCTGTCCCTaGGCGGCTGAGGCACCACTGTCTTCTGGAGGTCCC +
Preference number: 6 (lower is better)
Translates to: DGVSRAPGDFCP*AAEAPLSSGGP
Trigger: GGGACCTCCAGAAGACAGTGGTGCCTCAGCCGCCAAGGGACAGAAATCCCCCGGTGCCCTGGAGACCCCATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS TCA 72 bp CAGCCTGGGCCGTGCGAGGTCCTCAGAGCTCCAAGGTaGTCCGCCATCCCCAGCAAGACGCTCACAGACTTG +
Preference number: 6 (lower is better)
Translates to: QPGPCEVLRAPR*SAIPSKTLTDL
Trigger: CAAGTCTGTGAGCGTCTTGCTGGGGATGGCGGATCACCTTGGAGCTCTGAGGACCTCGCACGGCCCAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS GCA 72 bp TCCCACCCGACTCCAGCCGCTCTGCTGGTCCCGTCCTaGCCAGGTGATGGTTCTGCTGTTCGTGAACAGAGG +
Preference number: 6 (lower is better)
Translates to: SHPTPAALLVPS*PGDGSAVREQR
Trigger: CCTCTGTTCACGAACAGCAGAACCATCACCTGGGCAGGACGGGACCAGCAGAGCGGCTGGAGTCGGGTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302798.7
ENST00000374530.7
CDS GCA 72 bp TCATGCTTGCGCGTTCATGAGAAGAGGCAGGGGCTGTaGAGAGCTGCGATGGGGGCTGCTGCTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SCLRVHEKRQGL*RAAMGAAAAAA
Trigger: AGCAGCAGCAGCAGCAGCCCCCATCGCAGCTCTGCACAGCCCCTGCCTCTTCTCATGAACGCGCAAGCATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 72 bp GCCCATAAAAATCATGGTGACGGGCTGATCCAAGTTTaGCTCCGGCCCTGCAGCGCTGGGGGCTTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: AHKNHGDGLIQV*LRPCSAGGLGL
Trigger: CAGGCCCAAGCCCCCAGCGCTGCAGGGCCGGAGGCAAACTTGGATCAGCCCGTCACCATGATTTTTATGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS GCA 72 bp ACTTCCAGAGACACCGGGCACACACGCAGTGTCACCTaGCCCACCGTCTCTGGGTGTGTTGCAAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TSRDTGHTRSVT*PTVSGCVASSS
Trigger: GCTGCTGCTTGCAACACACCCAGAGACGGTGGGGCAGGTGACACTGCGTGTGTGCCCGGTGTCTCTGGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465091.1
CDS GCA 72 bp ATGGCGTACACAGCAGCCGCTCTGCTGGTCCCGTCCTaGCCAGGTGATGGTTCTGCTGTTCGTGAACAGAGG +
Preference number: 6 (lower is better)
Translates to: MAYTAAALLVPS*PGDGSAVREQR
Trigger: CCTCTGTTCACGAACAGCAGAACCATCACCTGGGCAGGACGGGACCAGCAGAGCGGCTGCTGTGTACGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000314527.9
ENST00000413420.5
ENST00000497711.1
CDS CCA 72 bp GGCACCTGCAGGCTGTCCCCCAGCGCATCTCTAGGCTaGCTGGGGGAATGGCCATTTGTTCTTTCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: GTCRLSPSASLG*LGEWPFVLSAS
Trigger: AGAGGCAGAAAGAACAAATGGCCATTCCCCCAGCCAGCCTAGAGATGCGCTGGGGGACAGCCTGCAGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 72 bp AGCTGCGATGGGGGCTGCTGCTGCTGCTGCTGTAACTaGTTCTGCAGCAGCAACTGTTCCTGCTGTGCCCTT +
Preference number: 6 (lower is better)
Translates to: SCDGGCCCCCCN*FCSSNCSCCAL
Trigger: AAGGGCACAGCAGGAACAGTTGCTGCTGCAGAAGCAGTTACAGCAGCAGCAGCAGCAGCCCCCATCGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 72 bp TCCTGGCTTCCTCCTCTTCGGCAGTTCCAGCGGGTATaGCCTGCAGCAGCCATTTCTCCCGAAGCACTTTGG +
Preference number: 6 (lower is better)
Translates to: SWLPPLRQFQRV*PAAAISPEALW
Trigger: CCAAAGTGCTTCGGGAGAAATGGCTGCTGCAGGGCATACCCGCTGGAACTGCCGAAGAGGAGGAAGCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302798.7
ENST00000314527.9
ENST00000374530.7
ENST00000374531.6
ENST00000413420.5
ENST00000465091.1
ENST00000483909.5
ENST00000497711.1
CDS CCA 72 bp CGGGCACACACGCAGTGTCACCTGCCCCACCGTCTCTaGGTGTGTTGCAAGCAGCAGCATTCTCCTAACATG +
Preference number: 6 (lower is better)
Translates to: RAHTQCHLPHRL*VCCKQQHSPNM
Trigger: CATGTTAGGAGAATGCTGCTGCTTGCAACACACCCAGAGACGGTGGGGCAGGTGACACTGCGTGTGTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465091.1
CDS CCA 72 bp TATCCTGGGACCCTGCAGAGCTATATGCTCTCAGCCTaGGCCGTGCGAGGTCCTCAGAGCTCCAAGGTGATC +
Preference number: 6 (lower is better)
Translates to: YPGTLQSYMLSA*AVRGPQSSKVI
Trigger: GATCACCTTGGAGCTCTGAGGACCTCGCACGGCCCAGGCTGAGAGCATATAGCTCTGCAGGGTCCCAGGATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS CCA 72 bp CACACAGTAGGTGCCCAGTCATGGCTGTGGAACGAATaGCTGCATGCATGCGCGAGGGAACTCAGGACCTGC +
Preference number: 6 (lower is better)
Translates to: HTVGAQSWLWNE*LHACARELRTC
Trigger: GCAGGTCCTGAGTTCCCTCGCGCATGCATGCAGCCATTCGTTCCACAGCCATGACTGGGCACCTACTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674068.1
CDS CAA 90 bp CCGCCCACCAGAACCACTGCACCAGGCTCTGGGGAGGATGTTCCATaGTACGTTCCATCCACAGCAGAATCACAGCAGTTGGCCTCTAGC +
Preference number: 6 (lower is better)
Translates to: PPTRTTAPGSGEDVP*YVPSTAESQQLASS
Trigger: GCTAGAGGCCAACTGCTGTGATTCTGCTGTGGATGGAACGTACAATGGAACATCCTCCCCAGAGCCTGGTGCAGTGGTTCTGGTGGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS TCA 72 bp CTTCCTGCCCAGAGCGCGCGCCTCAAACCTCCTCAGTaGGAACTGCCTTTTTCCAGACAGATTCCTGCGTGC +
Preference number: 6 (lower is better)
Translates to: LPAQSARLKPPQ*ELPFSRQIPAC
Trigger: GCACGCAGGAATCTGTCTGGAAAAAGGCAGTTCTCACTGAGGAGGTTTGAGGCGCGCGCTCTGGGCAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259318.7
CDS TCA 72 bp GCCATGGGGTCAGGGCTGCTATTACTGAGCTCGATGTaGGGAGGTGCCTGCCGGCTAGCTGTTCTTTCAGTG +
Preference number: 6 (lower is better)
Translates to: AMGSGLLLLSSM*GGACRLAVLSV
Trigger: CACTGAAAGAACAGCTAGCCGGCAGGCACCTCCTCACATCGAGCTCAGTAATAGCAGCCCTGACCCCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 72 bp GATGGGGGCTGCTGCTGCTGCTGCTGTAACTGCTTCTaGAGCAGCAACTGTTCCTGCTGTGCCCTTCTCTCT +
Preference number: 6 (lower is better)
Translates to: DGGCCCCCCNCF*SSNCSCCALLS
Trigger: AGAGAGAAGGGCACAGCAGGAACAGTTGCTGCTGCAGAAGCAGTTACAGCAGCAGCAGCAGCAGCCCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 72 bp GCTTCCTCCTCTTCGGCAGTTCCAGCGGGTATGCCCTaGAGCAGCCATTTCTCCCGAAGCACTTTGGACTTG +
Preference number: 6 (lower is better)
Translates to: ASSSSAVPAGMP*SSHFSRSTLDL
Trigger: CAAGTCCAAAGTGCTTCGGGAGAAATGGCTGCTGCAGGGCATACCCGCTGGAACTGCCGAAGAGGAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302798.7
ENST00000314527.9
ENST00000374530.7
ENST00000374531.6
ENST00000413420.5
ENST00000465091.1
ENST00000483909.5
ENST00000497711.1
CDS GCA 72 bp GTCAGGGCTGCTATTACTGAGCTCGATGTGAGGAGGTaGCTGCCGGCTAGCTGTTCTTTCAGTGGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: VRAAITELDVRR*LPASCSFSGFW
Trigger: CCAGAACCCACTGAAAGAACAGCTAGCCGGCAGGCACCTCCTCACATCGAGCTCAGTAATAGCAGCCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 72 bp CAGTCGCTTCAGGTCCCTGTTGCTCTGCTCCATCCCTaGTGGTTTTGGACACAGCTTTATCCACCTGCTCGG +
Preference number: 6 (lower is better)
Translates to: QSLQVPVALLHP*WFWTQLYPPAR
Trigger: CCGAGCAGGTGGATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCTGAAGCGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 72 bp GAGCATGTGTTCCTTGGGATGGCTGAGGCTCCCATCTaGAATCACAGTCCTTTCAGACACGTGCCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: EHVFLGMAEAPI*NHSPFRHVPSS
Trigger: GGAGGAGGGCACGTGTCTGAAAGGACTGTGATTGCAGATGGGAGCCTCAGCCATCCCAAGGAACACATGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS GCA 72 bp ATCCATAAGCATATCCTGGGACCCTGCAGAGCTATATaGTCTCAGCCTGGGCCGTGCGAGGTCCTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: IHKHILGPCRAI*SQPGPCEVLRA
Trigger: AGCTCTGAGGACCTCGCACGGCCCAGGCTGAGAGCATATAGCTCTGCAGGGTCCCAGGATATGCTTATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS GCA 72 bp GAGGCTTCTTGGATCCATAAGCATATCCTGGGACCCTaGAGAGCTATATGCTCTCAGCCTGGGCCGTGCGAG +
Preference number: 6 (lower is better)
Translates to: EASWIHKHILGP*RAICSQPGPCE
Trigger: CTCGCACGGCCCAGGCTGAGAGCATATAGCTCTGCAGGGTCCCAGGATATGCTTATGGATCCAAGAAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS CCA 72 bp GCCTGGGTGTACTCTGGCCCTTGGCCACCGCTTGCCTaGAATTCTCCATCAGCTGAAATTGTTTGCGAGCAG +
Preference number: 6 (lower is better)
Translates to: AWVYSGPWPPLA*NSPSAEIVCEQ
Trigger: CTGCTCGCAAACAATTTCAGCTGATGGAGAATTCCAGGCAAGCGGTGGCCAAGGGCCAGAGTACACCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 72 bp CCTCAGCTTGAAAGGCCCAACCATCACGTCAGATTCTaGAGTGGCCAGGAGGGAGGCTGTGCTTCTCAGCTC +
Preference number: 6 (lower is better)
Translates to: PQLERPNHHVRF*SGQEGGCASQL
Trigger: GAGCTGAGAAGCACAGCCTCCCTCCTGGCCACTCAAGAATCTGACGTGATGGTTGGGCCTTTCAAGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
ENST00000482335.1
CDS GCA 72 bp GCTTCAGCTTCCTCTACAGTCGCTTCAGGTCCCTGTTaGTCTGCTCCATCCCTGCTGGTTTTGGACACAGCT +
Preference number: 6 (lower is better)
Translates to: ASASSTVASGPC*SAPSLLVLDTA
Trigger: AGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCTGAAGCGACTGTAGAGGAAGCTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 72 bp GATGGGGCATTCTTTGTCCTGGGGCTCTGCGTACTCTaGAAGACTTGTCTCTGCCTCTTCAGCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: DGAFFVLGLCVL*KTCLCLFSSSS
Trigger: GGAAGAGGAGCTGAAGAGGCAGAGACAAGTCTTGCAGAGTACGCAGAGCCCCAGGACAAAGAATGCCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000482335.1
CDS GCA 72 bp ACGCAGTGTCACCTGCCCCACCGTCTCTGGGTGTGTTaGAAGCAGCAGCATTCTCCTAACATGTCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: TQCHLPHRLWVC*KQQHSPNMSAV
Trigger: TACAGCAGACATGTTAGGAGAATGCTGCTGCTTGCAACACACCCAGAGACGGTGGGGCAGGTGACACTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465091.1
CDS CCA 72 bp TCGCTTCAGGTCCCTGTTGCTCTGCTCCATCCCTGCTaGTTTTGGACACAGCTTTATCCACCTGCTCGGCTA +
Preference number: 6 (lower is better)
Translates to: SLQVPVALLHPC*FWTQLYPPARL
Trigger: TAGCCGAGCAGGTGGATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCTGAAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CCA 72 bp ATGTTCTGGAGGGCAGTGATGGGGCATTCTTTGTCCTaGGGCTCTGCGTACTCTGCAAGACTTGTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: MFWRAVMGHSLS*GSAYSARLVSA
Trigger: GGCAGAGACAAGTCTTGCAGAGTACGCAGAGCCCCAGGACAAAGAATGCCCCATCACTGCCCTCCAGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000482335.1
CDS CCA 72 bp AAGCTGGGGAGGCTTCTTGGATCCATAAGCATATCCTaGGACCCTGCAGAGCTATATGCTCTCAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: KLGRLLGSISIS*DPAELYALSLG
Trigger: GCCCAGGCTGAGAGCATATAGCTCTGCAGGGTCCCAGGATATGCTTATGGATCCAAGAAGCCTCCCCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS CAA 72 bp GGATTCCACCATTTTGCTGCAATGCCAGGATTCTTCTaGACGGCCTGGCTGCGGATGAGCTCTCTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: GFHHFAAMPGFF*TAWLRMSSLLS
Trigger: GGAGAGGAGAGAGCTCATCCGCAGCCAGGCCGTCAAGAAGAATCCTGGCATTGCAGCAAAATGGTGGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 90 bp GCTGGTTTTGGACACAGCTTTATCCACCTGCTCGGCTATGGCTTGTaGAATGGCATTCTGCACCAGGAGGCCAGCCTGATACTCCAAGGG +
Preference number: 6 (lower is better)
Translates to: AGFGHSFIHLLGYGL*NGILHQEASLILQG
Trigger: CCCTTGGAGTATCAGGCTGGCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAGGTGGATAAAGCTGTGTCCAAAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 90 bp CTTCCAGCCCTCTTCAACGGCGCAAACTGTGCCGGGCAAAAAGAATaGAAGAAAGCGCGGTGCACCAAAGTTTCTAAGCAGGCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: LPALFNGANCAGQKE*KKARCTKVSKQAGC
Trigger: GCAGCCAGCCTGCTTAGAAACTTTGGTGCACCGCGCTTTCTTCAATTCTTTTTGCCCGGCACAGTTTGCGCCGTTGAAGAGGGCTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS TCA 72 bp CACCTGAGGTGGCTCAAACATGCTCTGAGGCTTTTCTaGGCCGAAAGCCGCAGCTTCAGCTTCCTCTACAGT +
Preference number: 6 (lower is better)
Translates to: HLRWLKHALRLF*AESRSFSFLYS
Trigger: ACTGTAGAGGAAGCTGAAGCTGCGGCTTTCGGCTCAGAAAAGCCTCAGAGCATGTTTGAGCCACCTCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 72 bp TCAAGTTGCTTGACTCTGAACTCATCCTCTTCAGACTaGCGCCTCCTGGCTTCCTCCTCTTCGGCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: SSCLTLNSSSSD*RLLASSSSAVP
Trigger: TGGAACTGCCGAAGAGGAGGAAGCCAGGAGGCGGCAGTCTGAAGAGGATGAGTTCAGAGTCAAGCAACTTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302798.7
ENST00000314527.9
ENST00000374530.7
ENST00000374531.6
ENST00000413420.5
ENST00000465091.1
ENST00000483909.5
ENST00000497711.1
CDS CAA 72 bp GGACACAGCTTTATCCACCTGCTCGGCTATGGCTTGTaGAATGGCATTCTGCACCAGGAGGCCAGCCTGATA +
Preference number: 6 (lower is better)
Translates to: GHSFIHLLGYGL*NGILHQEASLI
Trigger: TATCAGGCTGGCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAGGTGGATAAAGCTGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 72 bp TTTGGACACAGCTTTATCCACCTGCTCGGCTATGGCTaGTTGAATGGCATTCTGCACCAGGAGGCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: FGHSFIHLLGYG*LNGILHQEASL
Trigger: CAGGCTGGCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAGGTGGATAAAGCTGTGTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 90 bp AGCTTGGAGGGCTTCTTGTCCTCATGGAAGGCACGCAGCTCAAACTaGGCCTCCTTTTTCAGTGTGGTGAGAGTGAACTCTCCATCTCGG +
Preference number: 6 (lower is better)
Translates to: SLEGFLSSWKARSSN*ASFFSVVRVNSPSR
Trigger: CCGAGATGGAGAGTTCACTCTCACCACACTGAAAAAGGAGGCCAAGTTTGAGCTGCGTGCCTTCCATGAGGACAAGAAGCCCTCCAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 90 bp CCTGCTGGTTTTGGACACAGCTTTATCCACCTGCTCGGCTATGGCTaGTTGAATGGCATTCTGCACCAGGAGGCCAGCCTGATACTCCAA +
Preference number: 6 (lower is better)
Translates to: PAGFGHSFIHLLGYG*LNGILHQEASLILQ
Trigger: TTGGAGTATCAGGCTGGCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAGGTGGATAAAGCTGTGTCCAAAACCAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 90 bp TCCCGTCCTGCCCAGGTGATGGTTCTGCTGTTCGTGAACAGAGGATaGGCAGGTCGGGAAGCTGGGAGGAAATGTAATTTACTGCATCTC +
Preference number: 6 (lower is better)
Translates to: SRPAQVMVLLFVNRG*AGREAGRKCNLLHL
Trigger: GAGATGCAGTAAATTACATTTCCTCCCAGCTTCCCGACCTGCCAATCCTCTGTTCACGAACAGCAGAACCATCACCTGGGCAGGACGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302798.7
ENST00000314527.9
ENST00000374530.7
ENST00000413420.5
ENST00000497711.1
CDS CAA 90 bp TCAACCGCGCACCCGTCGTGCAAGACTCCTCATTTCAAAGTTTCTTaGGGCGCCGACTTCTTGCCTTCCCTAGGCATGAAATCACTGAGG +
Preference number: 6 (lower is better)
Translates to: STAHPSCKTPHFKVS*GADFLPSLGMKSLR
Trigger: CCTCAGTGATTTCATGCCTAGGGAAGGCAAGAAGTCGGCGCCCAAAGAAACTTTGAAATGAGGAGTCTTGCACGACGGGTGCGCGGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674068.1
CDS TCA 72 bp CCATCCCCAGCAAGACGCTCACAGACTTGGAGGGAGTaGGTACCAGTTCCCATAAGAAGAACGAACAGCACT +
Preference number: 6 (lower is better)
Translates to: PSPARRSQTWRE*VPVPIRRTNST
Trigger: AGTGCTGTTCGTTCTTCTTATGGGAACTGGTACTCACTCCCTCCAAGTCTGTGAGCGTCTTGCTGGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS GCA 72 bp AGCTTCCTCTACAGTCGCTTCAGGTCCCTGTTGCTCTaGTCCATCCCTGCTGGTTTTGGACACAGCTTTATC +
Preference number: 6 (lower is better)
Translates to: SFLYSRFRSLLL*SIPAGFGHSFI
Trigger: GATAAAGCTGTGTCCAAAACCAGCAGGGATGGAGCAGAGCAACAGGGACCTGAAGCGACTGTAGAGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 72 bp AACTGTGCCGGGCAAAAAGAATTGAAGAAAGCGCGGTaGACCAAAGTTTCTAAGCAGGCTGGCTGCACCTCC +
Preference number: 6 (lower is better)
Translates to: NCAGQKELKKAR*TKVSKQAGCTS
Trigger: GGAGGTGCAGCCAGCCTGCTTAGAAACTTTGGTGCACCGCGCTTTCTTCAATTCTTTTTGCCCGGCACAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS CCA 72 bp TGGTTTTGGACACAGCTTTATCCACCTGCTCGGCTATaGCTTGTTGAATGGCATTCTGCACCAGGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: WFWTQLYPPARL*LVEWHSAPGGQ
Trigger: CTGGCCTCCTGGTGCAGAATGCCATTCAACAAGCCATAGCCGAGCAGGTGGATAAAGCTGTGTCCAAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 72 bp AGAACCACTGCACCAGGCTCTGGGGAGGATGTTCCATaGTACGTTCCATCCACAGCAGAATCACAGCAGTTG +
Preference number: 6 (lower is better)
Translates to: RTTAPGSGEDVP*YVPSTAESQQL
Trigger: CAACTGCTGTGATTCTGCTGTGGATGGAACGTACAATGGAACATCCTCCCCAGAGCCTGGTGCAGTGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 72 bp GCCAGTGAATTTTCCTGGAGGGCATTGGTTGTCTCATaGGATGCCCCGCTGTCACTGATGTTGTCCATGCTG +
Preference number: 6 (lower is better)
Translates to: ASEFSWRALVVS*DAPLSLMLSML
Trigger: CAGCATGGACAACATCAGTGACAGCGGGGCATCCAATGAGACAACCAATGCCCTCCAGGAAAATTCACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 90 bp AACTGTTCCTGCTGTGCCCTTCTCTCTTTGCGCTCCTTGTACTTTTaGTGCGACTCCAGATGTTCCTCGTCCAGCTGCTCCTCGATGGTT +
Preference number: 6 (lower is better)
Translates to: NCSCCALLSLRSLYF*CDSRCSSSSCSSMV
Trigger: AACCATCGAGGAGCAGCTGGACGAGGAACATCTGGAGTCGCACAAAAAGTACAAGGAGCGCAAAGAGAGAAGGGCACAGCAGGAACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 90 bp TCGTGCAAGACTCCTCATTTCAAAGTTTCTTTGGGCGCCGACTTCTaGCCTTCCCTAGGCATGAAATCACTGAGGGCCTGGCACACAGTA +
Preference number: 6 (lower is better)
Translates to: SCKTPHFKVSLGADF*PSLGMKSLRAWHTV
Trigger: TACTGTGTGCCAGGCCCTCAGTGATTTCATGCCTAGGGAAGGCAAGAAGTCGGCGCCCAAAGAAACTTTGAAATGAGGAGTCTTGCACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674068.1
CDS TCA 72 bp TCATGGACAAAGTCCGCTGTTTCCTGGACCTCAGCTTaGAAGGCCCAACCATCACGTCAGATTCTTGAGTGG +
Preference number: 6 (lower is better)
Translates to: SWTKSAVSWTSA*KAQPSRQILEW
Trigger: CCACTCAAGAATCTGACGTGATGGTTGGGCCTTTCAAGCTGAGGTCCAGGAAACAGCGGACTTTGTCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
ENST00000482335.1
CDS TCA 72 bp TCCCAGAGGACATGCCTAAGCCAGGGCCTCCTTCAATaGCCTCCTTTCTTCACACAGCATTGGGATAAGGTT +
Preference number: 6 (lower is better)
Translates to: SQRTCLSQGLLQ*PPFFTQHWDKV
Trigger: AACCTTATCCCAATGCTGTGTGAAGAAAGGAGGTCATTGAAGGAGGCCCTGGCTTAGGCATGTCCTCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485762.1
CDS CCA 72 bp TCATCCTCAAAGAGCTTGGAGGGCTTCTTGTCCTCATaGAAGGCACGCAGCTCAAACTTGGCCTCCTTTTTC +
Preference number: 6 (lower is better)
Translates to: SSSKSLEGFLSS*KARSSNLASFF
Trigger: GAAAAAGGAGGCCAAGTTTGAGCTGCGTGCCTTCCATGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 72 bp GGCTTCTTGTCCTCATGGAAGGCACGCAGCTCAAACTaGGCCTCCTTTTTCAGTGTGGTGAGAGTGAACTCT +
Preference number: 6 (lower is better)
Translates to: GFLSSWKARSSN*ASFFSVVRVNS
Trigger: AGAGTTCACTCTCACCACACTGAAAAAGGAGGCCAAGTTTGAGCTGCGTGCCTTCCATGAGGACAAGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 72 bp TGCAGCAGCAACTGTTCCTGCTGTGCCCTTCTCTCTTaGCGCTCCTTGTACTTTTTGTGCGACTCCAGATGT +
Preference number: 6 (lower is better)
Translates to: CSSNCSCCALLS*RSLYFLCDSRC
Trigger: ACATCTGGAGTCGCACAAAAAGTACAAGGAGCGCAAAGAGAGAAGGGCACAGCAGGAACAGTTGCTGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 72 bp GCCCAGGTGATGGTTCTGCTGTTCGTGAACAGAGGATaGGCAGGTCGGGAAGCTGGGAGGAAATGTAATTTA +
Preference number: 6 (lower is better)
Translates to: AQVMVLLFVNRG*AGREAGRKCNL
Trigger: TAAATTACATTTCCTCCCAGCTTCCCGACCTGCCAATCCTCTGTTCACGAACAGCAGAACCATCACCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302798.7
ENST00000314527.9
ENST00000374530.7
ENST00000413420.5
ENST00000497711.1
CDS CAA 72 bp ACTCCTCATTTCAAAGTTTCTTTGGGCGCCGACTTCTaGCCTTCCCTAGGCATGAAATCACTGAGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: TPHFKVSLGADF*PSLGMKSLRAW
Trigger: CCAGGCCCTCAGTGATTTCATGCCTAGGGAAGGCAAGAAGTCGGCGCCCAAAGAAACTTTGAAATGAGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674068.1
CDS CAA 72 bp CACCCGTCGTGCAAGACTCCTCATTTCAAAGTTTCTTaGGGCGCCGACTTCTTGCCTTCCCTAGGCATGAAA +
Preference number: 6 (lower is better)
Translates to: HPSCKTPHFKVS*GADFLPSLGMK
Trigger: TTTCATGCCTAGGGAAGGCAAGAAGTCGGCGCCCAAAGAAACTTTGAAATGAGGAGTCTTGCACGACGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674068.1
CDS TCA 72 bp AAATCATTGGATAGGGTCTCCAGGACTGTGGTATCCTaGGACCTCACCGACAATTCGTCCAGACCAGAGTCA +
Preference number: 6 (lower is better)
Translates to: KSLDRVSRTVVS*DLTDNSSRPES
Trigger: TGACTCTGGTCTGGACGAATTGTCGGTGAGGTCTCAGGATACCACAGTCCTGGAGACCCTATCCAATGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS TCA 72 bp TCTTCAACGGCGCAAACTGTGCCGGGCAAAAAGAATTaGAGAAAGCGCGGTGCACCAAAGTTTCTAAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSTAQTVPGKKN*RKRGAPKFLSR
Trigger: CCTGCTTAGAAACTTTGGTGCACCGCGCTTTCTTCAATTCTTTTTGCCCGGCACAGTTTGCGCCGTTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS CCA 72 bp CAATTTCCATGTTTTTGTGATCTGGGGAAAGAGAGCTaGCAGCAGGCTCCAGGAGGGTGGCACTATAGTTGT +
Preference number: 6 (lower is better)
Translates to: QFPCFCDLGKES*QQAPGGWHYSC
Trigger: ACAACTATAGTGCCACCCTCCTGGAGCCTGCTGCCAGCTCTCTTTCCCCAGATCACAAAAACATGGAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000471798.1
ENST00000480388.1
CDS CCA 72 bp TGGCCTCTAGCACCTCATCTAGATAGCGGATCTCTCTaGCAACATCATTATCCAGGGATTCGTGGTGATCAG +
Preference number: 6 (lower is better)
Translates to: WPLAPHLDSGSL*QHHYPGIRGDQ
Trigger: CTGATCACCACGAATCCCTGGATAATGATGTTGCCAGAGAGATCCGCTATCTAGATGAGGTGCTAGAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CCA 72 bp CATTGTACGTTCCATCCACAGCAGAATCACAGCAGTTaGCCTCTAGCACCTCATCTAGATAGCGGATCTCTC +
Preference number: 6 (lower is better)
Translates to: HCTFHPQQNHSS*PLAPHLDSGSL
Trigger: GAGAGATCCGCTATCTAGATGAGGTGCTAGAGGCCAACTGCTGTGATTCTGCTGTGGATGGAACGTACAATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CCA 72 bp ATTGTTCTTTCTCATGCTCGTCATCCTCAAAGAGCTTaGAGGGCTTCTTGTCCTCATGGAAGGCACGCAGCT +
Preference number: 6 (lower is better)
Translates to: IVLSHARHPQRA*RASCPHGRHAA
Trigger: AGCTGCGTGCCTTCCATGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATGACGAGCATGAGAAAGAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 72 bp TATTGTTCTTTCTCATGCTCGTCATCCTCAAAGAGCTaGGAGGGCTTCTTGTCCTCATGGAAGGCACGCAGC +
Preference number: 6 (lower is better)
Translates to: YCSFSCSSSSKS*EGFLSSWKARS
Trigger: GCTGCGTGCCTTCCATGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATGACGAGCATGAGAAAGAACAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 72 bp CTCTTCAACGGCGCAAACTGTGCCGGGCAAAAAGAATaGAAGAAAGCGCGGTGCACCAAAGTTTCTAAGCAG +
Preference number: 6 (lower is better)
Translates to: LFNGANCAGQKE*KKARCTKVSKQ
Trigger: CTGCTTAGAAACTTTGGTGCACCGCGCTTTCTTCAATTCTTTTTGCCCGGCACAGTTTGCGCCGTTGAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471798.1
CDS TCA 72 bp CCTCATACACTACTTTGGTACCATCATCATAGACTTTaGCTCCTTTCTGATGGACCCCCTCTGGGCCAATGG +
Preference number: 6 (lower is better)
Translates to: PHTLLWYHHHRL*LLSDGPPLGQW
Trigger: CCATTGGCCCAGAGGGGGTCCATCAGAAAGGAGTCAAAGTCTATGATGATGGTACCAAAGTAGTGTATGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS GCA 72 bp TGGCAGGTCGGGAAGCTGGGAGGAAATGTAATTTACTaGATCTCCATCCGTACTGGAGAAACCCTTCTGAAA +
Preference number: 6 (lower is better)
Translates to: WQVGKLGGNVIY*ISIRTGETLLK
Trigger: TTTCAGAAGGGTTTCTCCAGTACGGATGGAGATGCAGTAAATTACATTTCCTCCCAGCTTCCCGACCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302798.7
ENST00000314527.9
ENST00000374530.7
ENST00000413420.5
ENST00000497711.1
CDS CCA 72 bp AACTTAGCTTCTTTGCAGAGCATGTGTTCCTTGGGATaGCTGAGGCTCCCATCTGCAATCACAGTCCTTTCA +
Preference number: 6 (lower is better)
Translates to: NLASLQSMCSLG*LRLPSAITVLS
Trigger: TGAAAGGACTGTGATTGCAGATGGGAGCCTCAGCCATCCCAAGGAACACATGCTCTGCAAAGAAGCTAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS CAA 72 bp GGAATGCTGCAGCAGAAGTATCTGCTCGTCAAGCTGTaGTCGCTTGCCTTCTATTTCAGTCTGCCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: GMLQQKYLLVKL*SLAFYFSLPLS
Trigger: AGAAAGAGGCAGACTGAAATAGAAGGCAAGCGACAACAGCTTGACGAGCAGATACTTCTGCTGCAGCATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302798.7
ENST00000314527.9
ENST00000374530.7
ENST00000374531.6
ENST00000413420.5
ENST00000465091.1
ENST00000483909.5
ENST00000497711.1
CDS CAA 90 bp CTAATGCAGTATTGTTCTTTCTCATGCTCGTCATCCTCAAAGAGCTaGGAGGGCTTCTTGTCCTCATGGAAGGCACGCAGCTCAAACTTG +
Preference number: 6 (lower is better)
Translates to: LMQYCSFSCSSSSKS*EGFLSSWKARSSNL
Trigger: CAAGTTTGAGCTGCGTGCCTTCCATGAGGACAAGAAGCCCTCCAAGCTCTTTGAGGATGACGAGCATGAGAAAGAACAATACTGCATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 90 bp GCCTCCTTCAATGACCTCCTTTCTTCACACAGCATTGGGATAAGGTaGCAAACATCTGAAGCGACCCACAAGTCACCAGAAAGAAATGAG +
Preference number: 6 (lower is better)
Translates to: ASFNDLLSSHSIGIR*QTSEATHKSPERNE
Trigger: CTCATTTCTTTCTGGTGACTTGTGGGTCGCTTCAGATGTTTGCAACCTTATCCCAATGCTGTGTGAAGAAAGGAGGTCATTGAAGGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485762.1
CDS GCA 72 bp AGCACTTTGGACTTGGAATGCTGCAGCAGAAGTATCTaGTCGTCAAGCTGTTGTCGCTTGCCTTCTATTTCA +
Preference number: 6 (lower is better)
Translates to: STLDLECCSRSI*SSSCCRLPSIS
Trigger: TGAAATAGAAGGCAAGCGACAACAGCTTGACGAGCAGATACTTCTGCTGCAGCATTCCAAGTCCAAAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000302798.7
ENST00000314527.9
ENST00000374530.7
ENST00000374531.6
ENST00000413420.5
ENST00000465091.1
ENST00000483909.5
ENST00000497711.1
CDS CCA 72 bp ATCATAGACTTTGACTCCTTTCTGATGGACCCCCTCTaGGCCAATGGTAGATGTAGAGAGAATCTTGGTCTC +
Preference number: 6 (lower is better)
Translates to: IIDFDSFLMDPL*ANGRCRENLGL
Trigger: GAGACCAAGATTCTCTCTACATCTACCATTGGCCCAGAGGGGGTCCATCAGAAAGGAGTCAAAGTCTATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS CAA 90 bp GAATGGTCTTTCCTAGACTTATGTACCATTTCTAACTTAGCTTCTTaGCAGAGCATGTGTTCCTTGGGATGGCTGAGGCTCCCATCTGCA +
Preference number: 6 (lower is better)
Translates to: EWSFLDLCTISNLAS*QSMCSLGWLRLPSA
Trigger: TGCAGATGGGAGCCTCAGCCATCCCAAGGAACACATGCTCTGCAAAGAAGCTAAGTTAGAAATGGTACATAAGTCTAGGAAAGACCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS GCA 72 bp TTGTGCTTAATTTGTGCACTCCATTTTCTACTACGGTaGCTCCTGAGCGCACCTCATACACTACTTTGGTAC +
Preference number: 6 (lower is better)
Translates to: LCLICALHFLLR*LLSAPHTLLWY
Trigger: GTACCAAAGTAGTGTATGAGGTGCGCTCAGGAGGCACCGTAGTAGAAAATGGAGTGCACAAATTAAGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS CAA 72 bp AATGACCTCCTTTCTTCACACAGCATTGGGATAAGGTaGCAAACATCTGAAGCGACCCACAAGTCACCAGAA +
Preference number: 6 (lower is better)
Translates to: NDLLSSHSIGIR*QTSEATHKSPE
Trigger: TTCTGGTGACTTGTGGGTCGCTTCAGATGTTTGCAACCTTATCCCAATGCTGTGTGAAGAAAGGAGGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485762.1
CDS TCA 72 bp AAGCTCCTCTTGGGTCAAGGAGACATTGACAGATCTTaGGAACTGATCCAAAATCCCATGGTCATCATCCTT +
Preference number: 6 (lower is better)
Translates to: KLLLGQGDIDRS*ELIQNPMVIIL
Trigger: AAGGATGATGACCATGGGATTTTGGATCAGTTCTCAAGATCTGTCAATGTCTCCTTGACCCAAGAGGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS TCA 72 bp ACGTGCCCTCCTCCTAAGCTTGATTGTCCAGCCTTCTaGATAAGCTCTTCTACATCCTTTGTGCTTAATTTG +
Preference number: 6 (lower is better)
Translates to: TCPPPKLDCPAF*ISSSTSFVLNL
Trigger: CAAATTAAGCACAAAGGATGTAGAAGAGCTTATTCAGAAGGCTGGACAATCAAGCTTAGGAGGAGGGCACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS TCA 72 bp AATAGTGGACACGTCCGTCACTGTCTTCTCCCTCAATaGCTTCTCATCATCTTCATCAATGAGGACCAATTC +
Preference number: 6 (lower is better)
Translates to: NSGHVRHCLLPQ*LLIIFINEDQF
Trigger: GAATTGGTCCTCATTGATGAAGATGATGAGAAGTCATTGAGGGAGAAGACAGTGACGGACGTGTCCACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS CAA 72 bp TTCCTAGACTTATGTACCATTTCTAACTTAGCTTCTTaGCAGAGCATGTGTTCCTTGGGATGGCTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: FLDLCTISNLAS*QSMCSLGWLRL
Trigger: GAGCCTCAGCCATCCCAAGGAACACATGCTCTGCAAAGAAGCTAAGTTAGAAATGGTACATAAGTCTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000314527.9
ENST00000374531.6
ENST00000413420.5
ENST00000483909.5
CDS CAA 72 bp CGACCCACAAGTCACCAGAAAGAAATGAGCTCAGACTaGCATTTTCAATTTCGTTTCCTCTCAGTACAAGGG +
Preference number: 6 (lower is better)
Translates to: RPTSHQKEMSSD*HFQFRFLSVQG
Trigger: CCCTTGTACTGAGAGGAAACGAAATTGAAAATGCAAGTCTGAGCTCATTTCTTTCTGGTGACTTGTGGGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485762.1
CDS TCA 72 bp ATTGTTTGCGAGCAGCAGAGAAATCTATCTGCTCTGTaGCAATGTCCTCCTTTGCTTTGTCAATCATGCTTG +
Preference number: 6 (lower is better)
Translates to: IVCEQQRNLSAL*QCPPLLCQSCL
Trigger: CAAGCATGATTGACAAAGCAAAGGAGGACATTGTCACAGAGCAGATAGATTTCTCTGCTGCTCGCAAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS GCA 72 bp AGAGAAATCTATCTGCTCTGTGACAATGTCCTCCTTTaGTTTGTCAATCATGCTTGCGCGTTCATGAGAAGA +
Preference number: 6 (lower is better)
Translates to: REIYLLCDNVLL*FVNHACAFMRR
Trigger: TCTTCTCATGAACGCGCAAGCATGATTGACAAAGCAAAGGAGGACATTGTCACAGAGCAGATAGATTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259318.7
ENST00000302798.7
ENST00000374525.5
ENST00000374530.7
ENST00000434623.6
ENST00000480388.1
CDS CAA 72 bp CTGGTCATCTTAGAAGCAGATATCAATGACGCTATTTaGCTTCTCCTCCATACAATAAGCTCCACAAAGTCA +
Preference number: 6 (lower is better)
Translates to: LVILEADINDAI*LLLHTISSTKS
Trigger: TGACTTTGTGGAGCTTATTGTATGGAGGAGAAGCAAAATAGCGTCATTGATATCTGCTTCTAAGATGACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674068.1