RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PALLD (Homo sapiens)

Ensembl gene IDs: ENSG00000129116

Ensembl transcript IDs: ENST00000261509.10, ENST00000393726.7, ENST00000503290.1, ENST00000503457.1, ENST00000504519.5, ENST00000505667.6, ENST00000507325.5, ENST00000507699.1, ENST00000507735.6, ENST00000508898.5, ENST00000510998.5, ENST00000511611.1, ENST00000511682.1, ENST00000511948.1, ENST00000512127.5, ENST00000513187.5, ENST00000513245.5, ENST00000649826.1

Found 988 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCTTTaGTGTCTAGTCCCTGGTCCGAAAGTGCTGCATAGCGACTGGCTG +
Preference number: 1 (lower is better)
Translates to: SVSGEMGWPQVGTLL*CLVPGPKVLHSDWL
Trigger: CAGCCAGTCGCTATGCAGCACTTTCGGACCAGGGACTAGACATCAAAGCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR TCA 90 bp GATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTaGGATGGGTTGGCCTCAGGTTGGAACGCTGCTTTGATGTCTAGT +
Preference number: 1 (lower is better)
Translates to: DYRSSLSTKAVFSVR*DGLASGWNAALMSS
Trigger: ACTAGACATCAAAGCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR TCA 90 bp TTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAAGAAACTTaGACCACACTGCATAGAACATCTGCCACCCGGTGCTCAAGCCTA +
Preference number: 1 (lower is better)
Translates to: LNSILAMHISAVKET*TTLHRTSATRCSSL
Trigger: TAGGCTTGAGCACCGGGTGGCAGATGTTCTATGCAGTGTGGTTCAAGTTTCTTTGACCGCACTTATATGCATTGCTAATATGGAATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR GCA 90 bp CCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTaGTTCAGAATCATTGTAGTACTGTTTGTGGTACAACTCCCTCAT +
Preference number: 1 (lower is better)
Translates to: PYILHLVHCICLNTL*FRIIVVLFVVQLPH
Trigger: ATGAGGGAGTTGTACCACAAACAGTACTACAATGATTCTGAAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR GCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTaGTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGAC +
Preference number: 1 (lower is better)
Translates to: NFSFMPPCSLNPFST*STYLKSSTTTQTSD
Trigger: GTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR GCA 90 bp TCAAGTAGACTAGATGCTACAGGCAATTTCTCATTTATGCCACCATaGAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAAAATCT +
Preference number: 1 (lower is better)
Translates to: SSRLDATGNFSFMPP*SLNPFSTCSTYLKS
Trigger: AGATTTTAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCATCTAGTCTACTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR TCA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTGTTGGAACGCTGCTTTaGTGTCTAGTCCCTGGTCCG +
Preference number: 2 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGVGTLL*CLVPGP
Trigger: CGGACCAGGGACTAGACATCAAAGCAGCGTTCCAAC...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR CCA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTGGGTTGGCCTCAGGTTaGAACGCTGCTTTGATGTCT +
Preference number: 2 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGGLASG*NAALMS
Trigger: AGACATCAAAGCAGCGTTCCAACCTGAGGCCAACCC...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR CCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAACAGTGTCAGGTGAGATaGGTTGGCCTCAGGTTGGAA +
Preference number: 2 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQQCQVR*VGLRLE
Trigger: TTCCAACCTGAGGCCAACCCATCTCACCTGACACTG...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR CCA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTGTGCTGCATAGCGACTaGCTGAGGGCCGTACTTTTT +
Preference number: 2 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLVLHSD*LRAVLF
Trigger: AAAAAGTACGGCCCTCAGCCAGTCGCTATGCAGCAC...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR CCA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTCAGGTGAGATGGGTTaGCCTCAGGTTGGAACGCTG +
Preference number: 2 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNSGEMG*PQVGTL
Trigger: CAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGA...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR TCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGTGCTCTGTGACTGCTaGTGCCACTGGGTTGGGTAT +
Preference number: 2 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPVLCDC*CHWVGY
Trigger: ATACCCAACCCAGTGGCATCAGCAGTCACAGAGCAC...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR TCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCAGTATTCAGTGTCAGGTaGGATGGGTTGGCCTCAGGT +
Preference number: 2 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTAVFSVR*DGLASG
Trigger: ACCTGAGGCCAACCCATCTCACCTGACACTGAATAC...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR GCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATGCTCCACAGCATGTGTaGTCCACACTTCCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNAPQHV*STLPAG
Trigger: GCCAGCTGGAAGTGTGGAGCACACATGCTGTGGAGC...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR TCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTATGGCCCTGGGTTCCTTaGCTTGTGAATGGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLWPWVP*LVNGSV
Trigger: AACACTGCCATTCACAAGTCAAGGAACCCAGGGCCA...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR TCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCTGGCCCTGGGTTCCTTaGCTTGTGAATGGCAGTGTT +
Preference number: 2 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESWPWVP*LVNGSV
Trigger: AACACTGCCATTCACAAGTCAAGGAACCCAGGGCCA...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAGCTCCACAGCATGTGTaGTCCACACTTCCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQAPQHV*STLPAG
Trigger: GCCAGCTGGAAGTGTGGAGCACACATGCTGTGGAGC...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTATCTCCACAGCATGTGTaGTCCACAGCATGTGTGCTC +
Preference number: 2 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLSPQHV*STACVL
Trigger: GAGCACACATGCTGTGGAGCACACATGCTGTGGAGA...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGAAACCTCAGACACACTaGAATCTCCACAGCATGTGT +
Preference number: 2 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKKPQTH*NLHSMC
Trigger: ACACATGCTGTGGAGATTGCAGTGTGTCTGAGGTTT...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCGTGCTGCATAGCGACTaGCTGAGGGCCGTACTTTTT +
Preference number: 2 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESVLHSD*LRAVLF
Trigger: AAAAAGTACGGCCCTCAGCCAGTCGCTATGCAGCAC...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR CCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCCTTGGTCATTTGGGTaGTTTGGATGCTTTCTGTGG +
Preference number: 2 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHPWSFG*FGCFLW
Trigger: CCACAGAAAGCATCCAAACCACCCAAATGACCAAGG...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR CAA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTaGGAATCCAGCACCTTCTTAAGGCAAAGTTTCATGGCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: ICIQKAVFTEMPLQT*ESSTFLRQSFMAAG
Trigger: CCCTGCTGCCATGAAACTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTCTGATGCCACTGGGTTaGGTATTTGTTCTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLLMPLG*VFVLLV
Trigger: CACCAGGAGAACAAATACCCAACCCAGTGGCATCAG...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR CCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACAGGGTTGGCCTCAGGTTaGAACGCTGCTTTGATGTCT +
Preference number: 2 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTGLASG*NAALMS
Trigger: AGACATCAAAGCAGCGTTCCAACCTGAGGCCAACCC...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGGCCTTTTACATAATGTaGCAAAGGAATATGTTGGTC +
Preference number: 2 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRAFYIM*QRNMLV
Trigger: GACCAACATATTCCTTTGTCACATTATGTAAAAGGC...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR TCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAGCCTTTTACATAATGTaGCAAAGGAATATGTTGGTC +
Preference number: 2 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQAFYIM*QRNMLV
Trigger: GACCAACATATTCCTTTGTCACATTATGTAAAAGGC...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCATTTGGGTGGTTTGGATaGTTTCTGTGGAATGAACTG +
Preference number: 2 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTAFGWFG*FLWNEL
Trigger: CAGTTCATTCCACAGAAAGCATCCAAACCACCCAAA...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCTGTTGGTCAAGGCAATaGCTGTTTCAGTGTTTCAGC +
Preference number: 2 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESCWSRQ*LFQCFS
Trigger: GCTGAAACACTGAAACAGCCATTGCCTTGACCAACA...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR TCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCATTCACTGTATCTGTCTaGATACACTGTGCTTCAGAA +
Preference number: 2 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTAFTVSV*IHCASE
Trigger: TTCTGAAGCACAGTGTATTCAGACAGATACAGTGAA...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAATTCATCCTTACATATTaGACTTGGTTCACTGTATCT +
Preference number: 2 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQFILTY*TWFTVS
Trigger: AGATACAGTGAACCAAGTGCAATATGTAAGGATGAA...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGTTCATCCTTACATATTaGACTTGGTTCACTGTATCT +
Preference number: 2 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKFILTY*TWFTVS
Trigger: AGATACAGTGAACCAAGTGCAATATGTAAGGATGAA...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTTTGGGTGGTTTGGATaGTTTCTGTGGAATGAACTG +
Preference number: 2 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVFGWFG*FLWNEL
Trigger: CAGTTCATTCCACAGAAAGCATCCAAACCACCCAAA...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CCA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACGACAAAGGAATATGTTaGTCAAGGCAATGGCTGTTT +
Preference number: 2 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNDKGIC*SRQWLF
Trigger: AAACAGCCATTGCCTTGACCAACATATTCCTTTGTC...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR TCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTTCACTGTATCTGTCTaGATACACTGTGCTTCAGAA +
Preference number: 2 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVFTVSV*IHCASE
Trigger: TTCTGAAGCACAGTGTATTCAGACAGATACAGTGAA...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATTTGGGTGGTTTGGATaGTTTCTGTGGAATGAACTG +
Preference number: 2 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTFGWFG*FLWNEL
Trigger: CAGTTCATTCCACAGAAAGCATCCAAACCACCCAAA...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR CAA 90 bp CAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTaGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGA +
Preference number: 2 (lower is better)
Translates to: QFLIYATMQSQSIFN*LYIPKIFHYYTNLR
Trigger: TCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTCCAAATACTATATATaGCTTGGTCATTTGGGTGGT +
Preference number: 2 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVSKYYI*LGHLGG
Trigger: ACCACCCAAATGACCAAGGCATATATAGTATTTGGA...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCATCCAAATACTATATATaGCTTGGTCATTTGGGTGGT +
Preference number: 2 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPSKYYI*LGHLGG
Trigger: ACCACCCAAATGACCAAGGCATATATAGTATTTGGA...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTCATTTATGCCACCATaGAGTCTCAATCCATTTTCA +
Preference number: 2 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVSFMPP*SLNPFS
Trigger: TGAAAATGGATTGAGACTGCATGGTGGCATAAATGA...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTAATACTATATATGCCTTaGTCATTTGGGTGGTTTGGA +
Preference number: 2 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLILYMP*SFGWFG
Trigger: TCCAAACCACCCAAATGACCAAGGCATATATAGTAT...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCTGTCTGAATACACTGTaGTTCAGAATCATTGTAGTA +
Preference number: 2 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESCLNTL*FRIIVV
Trigger: TACTACAATGATTCTGAAGCACAGTGTATTCAGACA...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCTTCATCCTTACATATTaGACTTGGTTCACTGTATCT +
Preference number: 2 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESFILTY*TWFTVS
Trigger: AGATACAGTGAACCAAGTGCAATATGTAAGGATGAA...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATATACTATATATGCCTTaGTCATTTGGGTGGTTTGGA +
Preference number: 2 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNILYMP*SFGWFG
Trigger: TCCAAACCACCCAAATGACCAAGGCATATATAGTAT...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR TCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTGTGATCCTCATGCATTaGAATGTCACAGCAATTTTT +
Preference number: 2 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVVILMH*NVTAIF
Trigger: AAAAATTGCTGTGACATTTCAATGCATGAGGATCAC...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
3UTR-3UTR CCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAACACTTAAACCTTGGTTaGTTGGTGTTCTTACAAAGA +
Preference number: 2 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQHLNLG*LVFLQR
Trigger: TCTTTGTAAGAACACCAACCAACCAAGGTTTAAGTG...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR GCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAATGTCTGAATACACTGTaGTTCAGAATCATTGTAGTA +
Preference number: 2 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQCLNTL*FRIIVV
Trigger: TACTACAATGATTCTGAAGCACAGTGTATTCAGACA...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR TCA 72 bp GGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCTTTaGTGTCTAGTCCCTGGTCCGAAAGTGCTGCATAGC +
Preference number: 3 (lower is better)
Translates to: GEMGWPQVGTLL*CLVPGPKVLHS
Trigger: GCTATGCAGCACTTTCGGACCAGGGACTAGACATCAAAGCAGCGTTCCAACCTGAGGCCAACCCATCTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR GCA 72 bp CAAACCTCAGACACACTGCAATCTCCACAGCATGTGTaGTCCACAGCATGTGTGCTCCACACTTCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: QTSDTLQSPQHV*STACVLHTSSW
Trigger: CCAGCTGGAAGTGTGGAGCACACATGCTGTGGAGCACACATGCTGTGGAGATTGCAGTGTGTCTGAGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR TCA 72 bp TCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTaGGATGGGTTGGCCTCAGGTTGGAACGCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: SSLSTKAVFSVR*DGLASGWNAAL
Trigger: CAAAGCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR CCA 72 bp ACTTTCTACCAAGGCAGTATTCAGTGTCAGGTGAGATaGGTTGGCCTCAGGTTGGAACGCTGCTTTGATGTC +
Preference number: 3 (lower is better)
Translates to: TFYQGSIQCQVR*VGLRLERCFDV
Trigger: GACATCAAAGCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTGGTAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR CAA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGGGTTGGAACGCTGCTTaGATGTCTAGTCCCTGGTCC +
Preference number: 3 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKGWNAA*MSSPWS
Trigger: GGACCAGGGACTAGACATCAAAGCAGCGTTCCAACC...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR CAA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCAGGTTGGAACGCTGCTTaGATGTCTAGTCCCTGGTCC +
Preference number: 3 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTAGWNAA*MSSPWS
Trigger: GGACCAGGGACTAGACATCAAAGCAGCGTTCCAACC...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR CAA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGGGTCATTTGGGTGGTTaGGATGCTTTCTGTGGAATG +
Preference number: 3 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKGHLGG*DAFCGM
Trigger: CATTCCACAGAAAGCATCCAAACCACCCAAATGACC...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAGGTCATTTGGGTGGTTaGGATGCTTTCTGTGGAATG +
Preference number: 3 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQGHLGG*DAFCGM
Trigger: CATTCCACAGAAAGCATCCAAACCACCCAAATGACC...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACAGAAAAGCCTGGCCTTaGCTACCTCTCCTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNRKAWP*LPLLCL
Trigger: AAGGCACAGGAGAGGTAGCAAAGGCCAGGCTTTTCT...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGGGCACAAACCTGTTTTaGTCTCTCCTTATGTCTCCA +
Preference number: 3 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRGTNLF*SLLMSP
Trigger: TGGAGACATAAGGAGAGACAAAAACAGGTTTGTGCC...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCGCTGATGCCACTGGGTaGGGTATTTGTTCTCCTGGT +
Preference number: 3 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVADATG*GICSPG
Trigger: ACCAGGAGAACAAATACCCAACCCAGTGGCATCAGC...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR CAA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAATATGCCTTGGTCATTaGGGTGGTTTGGATGCTTTC +
Preference number: 3 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQICLGH*GGLDAF
Trigger: GAAAGCATCCAAACCACCCAAATGACCAAGGCATAT...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGAAAAGCCTGGCCTTaGCTACCTCTCCTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESRKAWP*LPLLCL
Trigger: AAGGCACAGGAGAGGTAGCAAAGGCCAGGCTTTTCT...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR TCA 72 bp ATATTAGCAATGCATATAAGTGCGGTCAAAGAAACTTaGACCACACTGCATAGAACATCTGCCACCCGGTGC +
Preference number: 3 (lower is better)
Translates to: ILAMHISAVKET*TTLHRTSATRC
Trigger: GCACCGGGTGGCAGATGTTCTATGCAGTGTGGTTCAAGTTTCTTTGACCGCACTTATATGCATTGCTAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCCACTGGGTTGGGTATTaGTTCTCCTGGTGTGGTTCA +
Preference number: 3 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVHWVGY*FSWCGS
Trigger: TGAACCACACCAGGAGAACAAATACCCAACCCAGTG...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR CAA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATGCTGATGCCACTGGGTaGGGTATTTGTTCTCCTGGT +
Preference number: 3 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNADATG*GICSPG
Trigger: ACCAGGAGAACAAATACCCAACCCAGTGGCATCAGC...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
3UTR-3UTR CAA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACGGTCATTTGGGTGGTTaGGATGCTTTCTGTGGAATG +
Preference number: 3 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNGHLGG*DAFCGM
Trigger: CATTCCACAGAAAGCATCCAAACCACCCAAATGACC...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR GCA 72 bp TCCTTCCAAACCCCTGATTCCTCCAAATACTATATATaGCTTGGTCATTTGGGTGGTTTGGATGCTTTCTGT +
Preference number: 3 (lower is better)
Translates to: SFQTPDSSKYYI*LGHLGGLDAFC
Trigger: ACAGAAAGCATCCAAACCACCCAAATGACCAAGGCATATATAGTATTTGGAGGAATCAGGGGTTTGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGTTTCATCCTTACATATaGCACTTGGTTCACTGTATC +
Preference number: 3 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRFHPYI*HLVHCI
Trigger: GATACAGTGAACCAAGTGCAATATGTAAGGATGAAA...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTAATATGCCTTGGTCATTaGGGTGGTTTGGATGCTTTC +
Preference number: 3 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLICLGH*GGLDAF
Trigger: GAAAGCATCCAAACCACCCAAATGACCAAGGCATAT...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACAATACTATATATGCCTaGGTCATTTGGGTGGTTTGG +
Preference number: 3 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNNTIYA*VIWVVW
Trigger: CCAAACCACCCAAATGACCAAGGCATATATAGTATT...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTATTTCATCCTTACATATaGCACTTGGTTCACTGTATC +
Preference number: 3 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLFHPYI*HLVHCI
Trigger: GATACAGTGAACCAAGTGCAATATGTAAGGATGAAA...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTTTCATCCTTACATATaGCACTTGGTTCACTGTATC +
Preference number: 3 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVFHPYI*HLVHCI
Trigger: GATACAGTGAACCAAGTGCAATATGTAAGGATGAAA...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGACAAGGCATTTACTaGGATTTCTTTGTCATCTCT +
Preference number: 3 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESRQGIY*DFFVIS
Trigger: AGAGATGACAAAGAAATCCAAGTAAATGCCTTGTCT...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR-3UTR CAA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAAATACTATATATGCCTaGGTCATTTGGGTGGTTTGG +
Preference number: 3 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQNTIYA*VIWVVW
Trigger: CCAAACCACCCAAATGACCAAGGCATATATAGTATT...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCGCCGTCCAGTACAACTaGTGCGGCCCTGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCAVQYN*CGPEGL
Trigger: CAAACCCTCAGGGCCGCATCAGTTGTACTGGACGGC...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCGGCACTCAGCAGGGCTaGCGGCTGATTTTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCGTQQG*RLIFRR
Trigger: TCTCCTAAAAATCAGCCGTCAGCCCTGCTGAGTGCC...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCGTTTTCAGTGTTGGCTaGGGTGACAACCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCVFSVG*GDNQLG
Trigger: GCCCAGCTGGTTGTCACCTCAGCCAACACTGAAAAC...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCGATGCCGGCATCACGTaGCGTGACTGGCTCTATGAT +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCDAGIT*RDWLYD
Trigger: ATCATAGAGCCAGTCACGTCACGTGATGCCGGCATC...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCGTGCTCTGTGACTGCTaGTGCCACTGGGTTGGGTAT +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCVLCDC*CHWVGY
Trigger: ATACCCAACCCAGTGGCATCAGCAGTCACAGAGCAC...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGAAGGCCGCGGGCGTCTaGCTGTGGCCGAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKKAAGV*LWPKRV
Trigger: CACCCGCTTCGGCCACAGCCAGACGCCCGCGGCCTT...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR TCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCGGGTTGGTAACCCACTaGCTTTGCAGTCCATTCTGC +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCGLVTH*LCSPFC
Trigger: GCAGAATGGACTGCAAAGTCAGTGGGTTACCAACCC...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCAGCCGCCTCCCGCTGCTaGCCGATTCCGCGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTAAASRC*PIPRPE
Trigger: CTCCGGACGCGGAATCGGGCAGCAGCGGGAGGCGGC...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR GCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTATCAGCGCCGAAGGGCTaGGCGAAGGGCGGCACGGGG +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALSAPKG*AKGGTG
Trigger: CCCCGTGCCGCCCTTCGCGCAGCCCTTCGGCGCTGA...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR CCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCCATCATCATCTAGGGTaGAGGCTGTGGTATGGAGGG +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCHHHLG*RLWYGG
Trigger: CCCTCCATACCACAGCCTCCACCCTAGATGATGATG...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTGCGGGCGTCTGGCTGTaGCCGAAGCGGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAAGVWL*PKRVAG
Trigger: GCCTGCCACCCGCTTCGGCCACAGCCAGACGCCCGC...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR GCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTGGGGCGCGGCCGAACTaGCTCGGCGTCGGGGACATG +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLGARPN*LGVGDM
Trigger: CATGTCCCCGACGCCGAGGCAGTTCGGCCGCGCCCC...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR CCA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTTCCAGAACCACCACCTaGCCTTCCGCCACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGSRTTT*PSATAV
Trigger: CACAGCCGTGGCGGAAGGCCAGGTGGTGGTTCTGGA...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCATCCCGGGAAGCCTCCTaGCGGCGCAGCGGCCACGAC +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSSREAS*RRSGHD
Trigger: GTCGTGGCCGCTGCGCCGCCAGGAGGCTTCCCGGGA...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR TCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCCAGCCACTCTACATGTaGAAGTTACTGGCATTCCCT +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCQPLYM*KLLAFP
Trigger: AGGGAATGCCAGTAACTTTCACATGTAGAGTGGCTG...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTCGAGGCCTTCTGACATaGGGATGGCCTGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGRGLLT*GWPEGD
Trigger: GTCTCCCTCAGGCCATCCTCATGTCAGAAGGCCTCG...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTAGACCTGCAGAGGGGGTaGCCCACGGACCCGGCACTC +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLDLQRG*PTDPAL
Trigger: GAGTGCCGGGTCCGTGGGGCACCCCCTCTGCAGGTC...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGACCTGCAGAGGGGGTaGCCCACGGACCCGGCACTC +
Preference number: 4 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPDLQRG*PTDPAL
Trigger: GAGTGCCGGGTCCGTGGGGCACCCCCTCTGCAGGTC...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGACCTGCAGAGGGGGTaGCCCACGGACCCGGCACTC +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFDLQRG*PTDPAL
Trigger: GAGTGCCGGGTCCGTGGGGCACCCCCTCTGCAGGTC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR GCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCTCAGGGTTGTTCACCTaGTGGATCTCAGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCSGLFT*WISDGF
Trigger: GAAACCATCTGAGATCCAGCAGGTGAACAACCCTGA...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCACGGCCCCTTGCCTGCTaGGCTCGAGAGGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSRPLAC*AREVLG
Trigger: GCCCAGGACCTCTCGAGCGCAGCAGGCAAGGGGCCG...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR CCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCAACCAAAGAAAAGCCTaGCCTTTGCTACCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCNQRKA*PLLPLL
Trigger: CAGGAGAGGTAGCAAAGGCCAGGCTTTTCTTTGGTT...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATAGCCGGAGGACTGCATaGCGGGGGCGGAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNSRRTA*RGRSGR
Trigger: CCTCCCGCTCCGCCCCCGCCATGCAGTCCTCCGGCT...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCTCGGCGTCGGGGACATaGGCGACGGGAGGCTGGACG +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFSASGT*ATGGWT
Trigger: CGTCCAGCCTCCCGTCGCCCATGTCCCCGACGCCGA...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCCTGGTGAGCAGGGGTaGCATGGCAGGTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRPGEQG*HGRFPL
Trigger: AAGAGGAAACCTGCCATGTCACCCCTGCTCACCAGG...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAACCTCGCCCGCCGGGTaGCTCAGGAGGCTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQTSPAG*LRRLRA
Trigger: GGCTCGGAGCCTCCTGAGTCACCCGGCGGGCGAGGT...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR GCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGGCTGTGGGTGAGACTTaGGGTTGTGTGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRAVGET*GCVALP
Trigger: TGGCAGTGCCACACAACCGCAAGTCTCACCCACAGC...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTGCGGGCCCGAGGTTCTaGGCGGCGATGAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAAGPRF*AAMNCL
Trigger: CAAGCAGTTCATCGCCGCGCAGAACCTCGGGCCCGC...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR GCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGGCCGGCCCCTTGCCTaGTGCGCTCGAGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVGRPLA*CAREVL
Trigger: CAGGACCTCTCGAGCGCAGCAGGCAAGGGGCCGGCC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR GCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTAACTGGCAGCCGCGCTaGCAAAAGGCCGGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSANWQPR*QKAGPL
Trigger: CAAGGGGCCGGCCTTTTGGCAGCGCGGCTGCCAGTT...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR CCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAGAATCGAGGTGCAGCTaGGAAGTGGAGGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQESRCS*EVEGAV
Trigger: CACAGCGCCCTCCACTTCCCAGCTGCACCTCGATTC...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTGTGGCCGAAGCGGGTaGCAGGCGACGAGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVCGRSG*QATSSG
Trigger: CCCACTGCTCGTCGCCTGCCACCCGCTTCGGCCACA...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR TCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGCCTGGTGAGCAGGGGTaGCATGGCAGGTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKPGEQG*HGRFPL
Trigger: AAGAGGAAACCTGCCATGTCACCCCTGCTCACCAGG...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTATGTAGCTGGGCCTGGTaGGCAGGGGTGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALCSWAW*AGVTWQ
Trigger: CTGCCATGTCACCCCTGCTCACCAGGCCCAGCTACA...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACCTGTGGGGCTGTGGGTaGGACTTGCGGTTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDLWGCG*DLRLCG
Trigger: GCCACACAACCGCAAGTCTCACCCACAGCCCCACAG...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGGCCTCTGCTATaGTCAGGGTATGGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRQRPLL*SGYGGP
Trigger: GGGACCTCCATACCCTGATCATAGCAGAGGCCTTTG...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTAGCAGATGTTGTGTCTaGGCCGCTGGGATTCGTAGC +
Preference number: 4 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGSRCCV*AAGIRS
Trigger: GCTACGAATCCCAGCGGCTCAGACACAACATCTGCT...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGGTTTTCAGTGTTGGCTaGGGTGACAACCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRVFSVG*GDNQLG
Trigger: GCCCAGCTGGTTGTCACCTCAGCCAACACTGAAAAC...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGTGGCTCCTTAGTGGGTaGAAGCAGGACAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRWLLSG*KQDSWC
Trigger: ACACCAGCTGTCCTGCTTTCACCCACTAAGGAGCCA...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCAGACATGAGGATGGCCTaGGGGAGACCGGGGACTTCG +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTADMRMA*GRPGTS
Trigger: CGAAGTCCCCGGTCTCCCTCAGGCCATCCTCATGTC...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCATGGGGCGCGCGTAGTTaGAGGAGCCGGAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSWGARS*RSRRTA
Trigger: TGCAGTCCTCCGGCTCCTTCAACTACGCGCGCCCCA...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR TCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCGAAATCCTGCGGGGGTaGCACCCTTGGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESEILRG*HPWAAP
Trigger: TGGGGCTGCCCAAGGGTGTCACCCCCGCAGGATTTC...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR TCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTACGACTCAGGCTCGGTaGGAGGCCGCCGGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVTTQAR*EAAGLQ
Trigger: CTGGAGACCGGCGGCCTCTCACCGAGCCTGAGTCGT...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR GCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTGACCTGCAGAGGGGGTaGCCCACGGACCCGGCACTC +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVDLQRG*PTDPAL
Trigger: GAGTGCCGGGTCCGTGGGGCACCCCCTCTGCAGGTC...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGACGAAACCACTGGACCTaGAGAGGGGGTGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRRNHWT*RGGAPR
Trigger: CCGTGGGGCACCCCCTCTGCAGGTCCAGTGGTTTCG...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR GCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGTTTGAAGGGCTGCCCTaGTCAGGCCTAACTCAGGGT +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRFEGLP*SGLTQG
Trigger: ACCCTGAGTTAGGCCTGAGCAGGGCAGCCCTTCAAA...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCCATCTCAAAGAATGGTaGCATTCCATTTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCHLKEW*HSIFHR
Trigger: CCTGTGGAAAATGGAATGGCACCATTCTTTGAGATG...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAGCTCCACAGCATGTGTaGTCCACACTTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQAPQHV*STLPAG
Trigger: GCCAGCTGGAAGTGTGGAGCACACATGCTGTGGAGC...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACGAATCGAGGTGCAGCTaGGAAGTGGAGGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHESRCS*EVEGAV
Trigger: CACAGCGCCCTCCACTTCCCAGCTGCACCTCGATTC...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTACCTTGCCGAAACCACTaGACCTGCAGAGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALPCRNH*TCRGGA
Trigger: GGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGG...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACCCTTGCCGAAACCACTaGACCTGCAGAGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDPCRNH*TCRGGA
Trigger: GGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGG...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGACATTCCAGCCGCACTaGGTACCCATCAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRTFQPH*VPISNS
Trigger: GGAGTTGCTGATGGGTACCCAGTGCGGCTGGAATGT...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAATGGGCGACGGGAGGCTaGACGAGCTGGGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQWATGG*TSWGWR
Trigger: CCTCCAGCCCCAGCTCGTCCAGCCTCCCGTCGCCCA...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR CCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAGCAGGCGACGAGCAGTaGGACGCCTGTCCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQAGDEQ*DACPGL
Trigger: GAGCCCGGGACAGGCGTCCCACTGCTCGTCGCCTGC...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR CCA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGCCTGCCTCAGCCTCCTaGGTAGCTGGGACTATGTGC +
Preference number: 4 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLPASAS*VAGTMC
Trigger: GCACATAGTCCCAGCTACCCAGGAGGCTGAGGCAGG...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGCCTGGTGAGCAGGGGTaGCATGGCAGGTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLPGEQG*HGRFPL
Trigger: AAGAGGAAACCTGCCATGTCACCCCTGCTCACCAGG...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTTGTAGCTGGGCCTGGTaGGCAGGGGTGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLCSWAW*AGVTWQ
Trigger: CTGCCATGTCACCCCTGCTCACCAGGCCCAGCTACA...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGGTACCCACTGTCTGGTaGCGAGGACTCCCCATTTGG +
Preference number: 4 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLVPTVW*RGLPIW
Trigger: CCAAATGGGGAGTCCTCGTCACCAGACAGTGGGTAC...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGAGCAGGGCTGACGGCTaGTTTTTAGGAGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRSRADG*FLGDRY
Trigger: GTACCTGTCTCCTAAAAATCAGCCGTCAGCCCTGCT...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTCTGTGGGGCTGTGGGTaGGACTTGCGGTTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLLWGCG*DLRLCG
Trigger: GCCACACAACCGCAAGTCTCACCCACAGCCCCACAG...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCACTGTGGGGCTGTGGGTaGGACTTGCGGTTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSLWGCG*DLRLCG
Trigger: GCCACACAACCGCAAGTCTCACCCACAGCCCCACAG...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCCTCCAGCTCTTGATTTaGAAGCTAAACTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCLQLLI*KLNFHC
Trigger: ACAGTGAAAGTTTAGCTTTCAAATCAAGAGCTGGAG...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTCAGTGTTGGCTGAGGTaGCAACCAGCTGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAQCWLR*QPAGQC
Trigger: GCACTGCCCAGCTGGTTGTCACCTCAGCCAACACTG...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAGCCGTCCAGTACAACTaGTGCGGCCCTGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALAVQYN*CGPEGL
Trigger: CAAACCCTCAGGGCCGCATCAGTTGTACTGGACGGC...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTGACATGAGGATGGCCTaGGGGAGACCGGGGACTTCG +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLDMRMA*GRPGTS
Trigger: CGAAGTCCCCGGTCTCCCTCAGGCCATCCTCATGTC...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAGACATGAGGATGGCCTaGGGGAGACCGGGGACTTCG +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLDMRMA*GRPGTS
Trigger: CGAAGTCCCCGGTCTCCCTCAGGCCATCCTCATGTC...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGAAGCTCCAGGCTGAATaGGTTCTGTCCTGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRKLQAE*VLSCSV
Trigger: AACCGAGCAGGACAGAACTCATTCAGCCTGGAGCTT...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGTTGTGGCTCCCTGAATaGGCAGGCAGATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKLWLPE*AGRCSR
Trigger: ACGGCTACATCTGCCTGCTCATTCAGGGAGCCACAA...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCTATGAATTGAGTAACTaGGCTAAGAGAGGCCACTTA +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCYELSN*AKRGHL
Trigger: TAAGTGGCCTCTCTTAGCTCAGTTACTCAATTCATA...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGGCTGTGGGTGAGACTTaGGGTTGTGTGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLAVGET*GCVALP
Trigger: TGGCAGTGCCACACAACCGCAAGTCTCACCCACAGC...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACACGAAACCACTGGACCTaGAGAGGGGGTGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTRNHWT*RGGAPR
Trigger: CCGTGGGGCACCCCCTCTGCAGGTCCAGTGGTTTCG...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCGAAACCACTGGACCTaGAGAGGGGGTGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNRNHWT*RGGAPR
Trigger: CCGTGGGGCACCCCCTCTGCAGGTCCAGTGGTTTCG...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCCTCTTTGGAGAGATCTaGTTCCCATCTTTAAACCAA +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCLFGEI*FPSLNQ
Trigger: TTGGTTTAAAGATGGGAAGCAGATCTCTCCAAAGAG...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTCGAGCGCCGGCCTCCTaGTCCAGTCGGATTTGGTTC +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCRAPAS*SSRIWF
Trigger: GAACCAAATCCGACTGGAGCAGGAGGCCGGCGCTCG...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR CCA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTAGACTTGCGGTTGTGTaGCACTGCCAAGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGRLAVV*HCQVLV
Trigger: AACCAGGACTTGGCAGTGCCACACAACCGCAAGTCT...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGGCGCTGTGGGGCTGTaGGTGAGACTTGCGGTTGTG +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSGAVGL*VRLAVV
Trigger: CACAACCGCAAGTCTCACCCACAGCCCCACAGCGCC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACGAATCGAGGTGCAGCTaGGAAGTGGAGGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDESRCS*EVEGAV
Trigger: CACAGCGCCCTCCACTTCCCAGCTGCACCTCGATTC...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGTCCAGAACCACCACCTaGCCTTCCGCCACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLSRTTT*PSATAV
Trigger: CACAGCCGTGGCGGAAGGCCAGGTGGTGGTTCTGGA...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTCCAGAACCACCACCTaGCCTTCCGCCACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCSRTTT*PSATAV
Trigger: CACAGCCGTGGCGGAAGGCCAGGTGGTGGTTCTGGA...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCCCTTGCCGAAACCACTaGACCTGCAGAGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESPCRNH*TCRGGA
Trigger: GGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGG...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGGAGGTGACAACCAGCTaGGCAGTGCTGGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKEVTTS*AVLVAD
Trigger: ATCAGCAACCAGCACTGCCCAGCTGGTTGTCACCTC...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAACATTCCAGCCGCACTaGGTACCCATCAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQTFQPH*VPISNS
Trigger: GGAGTTGCTGATGGGTACCCAGTGCGGCTGGAATGT...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGTCAGGTGAGATGGGTTaGCCTCAGGTTGGAACGCTG +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKSGEMG*PQVGTL
Trigger: CAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGA...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTGGCCCCAGGGGACTTaGCCTCTCTTTCCATCTCCC +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCWPQGT*PLFPSP
Trigger: GGGAGATGGAAAGAGAGGTCAAGTCCCCTGGGGCCA...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCTGGCCCCAGGGGACTTaGCCTCTCTTTCCATCTCCC +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESWPQGT*PLFPSP
Trigger: GGGAGATGGAAAGAGAGGTCAAGTCCCCTGGGGCCA...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTACAGTGTTGGCTGAGGTaGCAACCAGCTGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLQCWLR*QPAGQC
Trigger: GCACTGCCCAGCTGGTTGTCACCTCAGCCAACACTG...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCCAGTGTTGGCTGAGGTaGCAACCAGCTGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFQCWLR*QPAGQC
Trigger: GCACTGCCCAGCTGGTTGTCACCTCAGCCAACACTG...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGCAACTGATGCGGCCCTaGGGGTTTGCAGCCATAATT +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKQLMRP*GFAAII
Trigger: AATTATGGCTGCAAACCCTCAGGGCCGCATCAGTTG...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAGCCGTCCAGTACAACTaGTGCGGCCCTGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLAVQYN*CGPEGL
Trigger: CAAACCCTCAGGGCCGCATCAGTTGTACTGGACGGC...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGACATGAGGATGGCCTaGGGGAGACCGGGGACTTCG +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVDMRMA*GRPGTS
Trigger: CGAAGTCCCCGGTCTCCCTCAGGCCATCCTCATGTC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTCGAGGCCTTCTGACATaGGGATGGCCTGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLRGLLT*GWPEGD
Trigger: GTCTCCCTCAGGCCATCCTCATGTCAGAAGGCCTCG...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCACGAGGCCTTCTGACATaGGGATGGCCTGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSRGLLT*GWPEGD
Trigger: GTCTCCCTCAGGCCATCCTCATGTCAGAAGGCCTCG...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGGTCTCCACTGTCCCTTaGTCTAGAACGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKVSTVP*SRTRPS
Trigger: AGAAGGCCTCGTTCTAGATCAAGGGACAGTGGAGAC...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAGGGTTGGTAACCCACTaGCTTTGCAGTCCATTCTGC +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQGLVTH*LCSPFC
Trigger: GCAGAATGGACTGCAAAGTCAGTGGGTTACCAACCC...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTGTTGGAACGCTGCTTTaGTGTCTAGTCCCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLVGTLL*CLVPGP
Trigger: CGGACCAGGGACTAGACATCAAAGCAGCGTTCCAAC...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGGTATTCAGTGTCAGGTaGGATGGGTTGGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKVFSVR*DGLASG
Trigger: ACCTGAGGCCAACCCATCTCACCTGACACTGAATAC...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTTGGATGAATCGAGGTaGAGCTGGGAAGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLLDESR*SWEVEG
Trigger: GCCCTCCACTTCCCAGCTGCACCTCGATTCATCCAA...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGAACTCGGCTCCCTTCTaGTACTTCTTGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKNSAPF*YFLAPQ
Trigger: CTGAGGAGCCAAGAAGTAGCAGAAGGGAGCCGAGTT...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTCGAAACCACTGGACCTaGAGAGGGGGTGCCCCACGG +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVRNHWT*RGGAPR
Trigger: CCGTGGGGCACCCCCTCTGCAGGTCCAGTGGTTTCG...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCTCCAAATACTATATATaGCTTGGTCATTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCSKYYI*LGHLGG
Trigger: ACCACCCAAATGACCAAGGCATATATAGTATTTGGA...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTAAAAGGCCGGCCCCTTaGCTGCTGCGCTCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVKRPAP*LLRSRG
Trigger: ACCTCTCGAGCGCAGCAGGCAAGGGGCCGGCCTTTT...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR GCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGCGCAAAACGCCGTCTaGCCCCACTCCCAAACAAGC +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFAQNAV*PHSQTS
Trigger: GCTTGTTTGGGAGTGGGGGCAGACGGCGTTTTGCGC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR CCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACTTTCGGAGTCGGCTATaGCTCTCCGGGCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDFRSRL*LSGPGQ
Trigger: TTGACCTGGCCCGGAGAGCCATAGCCGACTCCGAAA...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCCTTGTCACACAGCTaGCTCTGGGGGCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSALSHS*LWGPPF
Trigger: AAAGGGTGGCCCCCAGAGCCAGCTGTGTGACAAGGC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATGGCGCTGTGGGGCTGTaGGTGAGACTTGCGGTTGTG +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNGAVGL*VRLAVV
Trigger: CACAACCGCAAGTCTCACCCACAGCCCCACAGCGCC...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGGCTATGATCAGGGTATaGAGGTCCCCTCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLAMIRV*RSPPSQ
Trigger: CTGTGAGGGAGGGGACCTCCATACCCTGATCATAGC...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCACAGGGACAGACAGTaGTTGAATCACAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRHRDRQ*LNHSCG
Trigger: ACCACAGCTGTGATTCAACCACTGTCTGTCCCTGTG...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTCCTTGCCGAAACCACTaGACCTGCAGAGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVPCRNH*TCRGGA
Trigger: GGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGG...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACTCCACGGCTGGGATaGACTCCGTTCGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALTPRLG*TPFVSL
Trigger: GAGGGAAACGAACGGAGTCCATCCCAGCCGTGGAGT...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTTATGTTAACCTCGGCTaGCCATTGTTCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGYVNLG*PLFRRS
Trigger: GGACCTCCTGAACAATGGCCAGCCGAGGTTAACATA...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAACATCATCATCTAGGGTaGAGGCTGTGGTATGGAGGG +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQHHHLG*RLWYGG
Trigger: CCCTCCATACCACAGCCTCCACCCTAGATGATGATG...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACTGGTTCTGGAGTTGCTaGAGCTTCAGAGGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHWFWSC*SFRGSL
Trigger: GAGGGACCCTCTGAAGCTCCAGCAACTCCAGAACCA...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR CCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGTCTACTGGCCTTCTTTaGAAATCCTGCGGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKSTGLL*KSCGGD
Trigger: GTCACCCCCGCAGGATTTCCAAAGAAGGCCAGTAGA...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR TCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACGTTGACCTGTTATCCTaGGGTCTCCTCGAGGCGTGT +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDVDLLS*GLLEAC
Trigger: ACACGCCTCGAGGAGACCTCAGGATAACAGGTCAAC...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTTGTAGCTGGGCCTGGTaGGCAGGGGTGACATGGCAG +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVCSWAW*AGVTWQ
Trigger: CTGCCATGTCACCCCTGCTCACCAGGCCCAGCTACA...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAGTACCCACTGTCTGGTaGCGAGGACTCCCCATTTGG +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLVPTVW*RGLPIW
Trigger: CCAAATGGGGAGTCCTCGTCACCAGACAGTGGGTAC...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTAGCAGGGCTGACGGCTaGTTTTTAGGAGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLSRADG*FLGDRY
Trigger: GTACCTGTCTCCTAAAAATCAGCCGTCAGCCCTGCT...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGAGCAGGGCTGACGGCTaGTTTTTAGGAGACAGGTAC +
Preference number: 4 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLSRADG*FLGDRY
Trigger: GTACCTGTCTCCTAAAAATCAGCCGTCAGCCCTGCT...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACGGCACTCAGCAGGGCTaGCGGCTGATTTTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDGTQQG*RLIFRR
Trigger: TCTCCTAAAAATCAGCCGTCAGCCCTGCTGAGTGCC...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTCAAAGGCCTCTGCTATaGTCAGGGTATGGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAQRPLL*SGYGGP
Trigger: GGGACCTCCATACCCTGATCATAGCAGAGGCCTTTG...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAGCCACTCTACATGTaGAAGTTACTGGCATTCCCT +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRQPLYM*KLLAFP
Trigger: AGGGAATGCCAGTAACTTTCACATGTAGAGTGGCTG...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGCCGTCCAGTACAACTaGTGCGGCCCTGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVAVQYN*CGPEGL
Trigger: CAAACCCTCAGGGCCGCATCAGTTGTACTGGACGGC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACACGAGGCCTTCTGACATaGGGATGGCCTGAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTRGLLT*GWPEGD
Trigger: GTCTCCCTCAGGCCATCCTCATGTCAGAAGGCCTCG...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACGTCTCCACTGTCCCTTaGTCTAGAACGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHVSTVP*SRTRPS
Trigger: AGAAGGCCTCGTTCTAGATCAAGGGACAGTGGAGAC...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTAAGCTCCAGGCTGAATaGGTTCTGTCCTGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLKLQAE*VLSCSV
Trigger: AACCGAGCAGGACAGAACTCATTCAGCCTGGAGCTT...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAGTTGGAACGCTGCTTTaGTGTCTAGTCCCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALVGTLL*CLVPGP
Trigger: CGGACCAGGGACTAGACATCAAAGCAGCGTTCCAAC...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR GCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGTGGAGGTTGTGGCCTTaGCTATTCATTAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRWRLWP*LFIRDC
Trigger: GCAGTCTCTAATGAATAGGCAAGGCCACAACCTCCA...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTGCGGTTGTGTGGCACTaGCAAGTCCTGGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLAVVWH*QVLVVL
Trigger: CAGGACAACCAGGACTTGGCAGTGCCACACAACCGC...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAGCGGTTGTGTGGCACTaGCAAGTCCTGGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRAVVWH*QVLVVL
Trigger: CAGGACAACCAGGACTTGGCAGTGCCACACAACCGC...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAGCTGTGGGTGAGACTTaGGGTTGTGTGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRAVGET*GCVALP
Trigger: TGGCAGTGCCACACAACCGCAAGTCTCACCCACAGC...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTTGAAGGGCTGCCCTaGTCAGGCCTAACTCAGGGT +
Preference number: 4 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNFEGLP*SGLTQG
Trigger: ACCCTGAGTTAGGCCTGAGCAGGGCAGCCCTTCAAA...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAACACAGGGGGTTTGTGTaGTTCTTTAGCAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQHRGFV*FFSSNH
Trigger: GTGGTTGCTGCTAAAGAAGCACACAAACCCCCTGTG...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGCTCCACAGCATGTGTaGTCCACACTTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFAPQHV*STLPAG
Trigger: GCCAGCTGGAAGTGTGGAGCACACATGCTGTGGAGC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCGCTCCACAGCATGTGTaGTCCACACTTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVAPQHV*STLPAG
Trigger: GCCAGCTGGAAGTGTGGAGCACACATGCTGTGGAGC...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGATTTGGTTCTGGAGTTaGTGGAGCTTCAGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKIWFWS*WSFRGS
Trigger: GGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAAT...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR CCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTATTTCGGAGTCGGCTATaGCTCTCCGGGCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLFRSRL*LSGPGQ
Trigger: TTGACCTGGCCCGGAGAGCCATAGCCGACTCCGAAA...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTGGCGCTGTGGGGCTGTaGGTGAGACTTGCGGTTGTG +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVGAVGL*VRLAVV
Trigger: CACAACCGCAAGTCTCACCCACAGCCCCACAGCGCC...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAGCTATGATCAGGGTATaGAGGTCCCCTCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALAMIRV*RSPPSQ
Trigger: CTGTGAGGGAGGGGACCTCCATACCCTGATCATAGC...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTTCCAGAACCACCACCTaGCCTTCCGCCACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVSRTTT*PSATAV
Trigger: CACAGCCGTGGCGGAAGGCCAGGTGGTGGTTCTGGA...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAACCAGCTGGGCAGTGCTaGTTGCTGATCCATAATCAT +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQPAGQC*LLIHNH
Trigger: ATGATTATGGATCAGCAACCAGCACTGCCCAGCTGG...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAACTCCACGGCTGGGATaGACTCCGTTCGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLTPRLG*TPFVSL
Trigger: GAGGGAAACGAACGGAGTCCATCCCAGCCGTGGAGT...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGTATGTTAACCTCGGCTaGCCATTGTTCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKYVNLG*PLFRRS
Trigger: GGACCTCCTGAACAATGGCCAGCCGAGGTTAACATA...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCATCATCATCTAGGGTaGAGGCTGTGGTATGGAGGG +
Preference number: 4 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHHHHLG*RLWYGG
Trigger: CCCTCCATACCACAGCCTCCACCCTAGATGATGATG...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCCAAAATATCTGAGGTaGTGGCACTCCCAATACACG +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRPKYLR*WHSQYT
Trigger: CGTGTATTGGGAGTGCCACCACCTCAGATATTTTGG...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAACTGATGCCACTGGGTTaGGTATTTGTTCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQLMPLG*VFVLLV
Trigger: CACCAGGAGAACAAATACCCAACCCAGTGGCATCAG...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTCAGGTGAGATGGGTTaGCCTCAGGTTGGAACGCTG +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSASGEMG*PQVGTL
Trigger: CAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGGTTGACCTGTTATCCTaGGGTCTCCTCGAGGCGTGT +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLVDLLS*GLLEAC
Trigger: ACACGCCTCGAGGAGACCTCAGGATAACAGGTCAAC...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTAGGCTGGACAGGTGTTaGCCTGTTATCCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSARLDRC*PVILRS
Trigger: AGACCTCAGGATAACAGGTCAACACCTGTCCAGCCT...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCAGGGCCACCCTTTCTTTaGTGTGGCGTTTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTAGPPFL*CGVLGF
Trigger: AAAGCCCAAAACGCCACATCAAAGAAAGGGTGGCCC...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAGGCACTCAGCAGGGCTaGCGGCTGATTTTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRGTQQG*RLIFRR
Trigger: TCTCCTAAAAATCAGCCGTCAGCCCTGCTGAGTGCC...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTTGGCCCCAGGGGACTTaGCCTCTCTTTCCATCTCCC +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVWPQGT*PLFPSP
Trigger: GGGAGATGGAAAGAGAGGTCAAGTCCCCTGGGGCCA...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCATCCTCAGCTTTTGGATaGATCGAGGTGCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTASSAFG*IEVQLG
Trigger: TCCCAGCTGCACCTCGATTCATCCAAAAGCTGAGGA...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCCAAAGGCCTCTGCTATaGTCAGGGTATGGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFQRPLL*SGYGGP
Trigger: GGGACCTCCATACCCTGATCATAGCAGAGGCCTTTG...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTAGCAGATGTTGTGTCTaGGCCGCTGGGATTCGTAGC +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCSRCCV*AAGIRS
Trigger: GCTACGAATCCCAGCGGCTCAGACACAACATCTGCT...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAACTGGCACCTTCAATaGACACCTCAGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQNWHLQ*TPQQML
Trigger: CAACATCTGCTGAGGTGTTCATTGAAGGTGCCAGTT...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGTTTTCAGTGTTGGCTaGGGTGACAACCAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFVFSVG*GDNQLG
Trigger: GCCCAGCTGGTTGTCACCTCAGCCAACACTGAAAAC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTGGCTCCTTAGTGGGTaGAAGCAGGACAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCWLLSG*KQDSWC
Trigger: ACACCAGCTGTCCTGCTTTCACCCACTAAGGAGCCA...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACTCAGGAGGTCCTCCTTaGAGCGAAGTTTTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHSGGPP*SEVFVP
Trigger: TGGAACGAAAACTTCGCTTCAAGGAGGACCTCCTGA...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTACAACTGATGCGGCCCTaGGGGTTTGCAGCCATAATT +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALQLMRP*GFAAII
Trigger: AATTATGGCTGCAAACCCTCAGGGCCGCATCAGTTG...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGGAGCCTGCAAGAAGTaGGGTCTGAAGAATCGCTCC +
Preference number: 4 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPGACKK*GLKNRS
Trigger: GGAGCGATTCTTCAGACCTCACTTCTTGCAGGCTCC...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTAGGAGCCTGCAAGAAGTaGGGTCTGAAGAATCGCTCC +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLGACKK*GLKNRS
Trigger: GGAGCGATTCTTCAGACCTCACTTCTTGCAGGCTCC...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGGAGCCTGCAAGAAGTaGGGTCTGAAGAATCGCTCC +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFGACKK*GLKNRS
Trigger: GGAGCGATTCTTCAGACCTCACTTCTTGCAGGCTCC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGGAGCCTGCAAGAAGTaGGGTCTGAAGAATCGCTCC +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSGACKK*GLKNRS
Trigger: GGAGCGATTCTTCAGACCTCACTTCTTGCAGGCTCC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTGGGTTGGTAACCCACTaGCTTTGCAGTCCATTCTGC +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAGLVTH*LCSPFC
Trigger: GCAGAATGGACTGCAAAGTCAGTGGGTTACCAACCC...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTAGATGCCGGCATCACGTaGCGTGACTGGCTCTATGAT +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLDAGIT*RDWLYD
Trigger: ATCATAGAGCCAGTCACGTCACGTGATGCCGGCATC...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGATGCCGGCATCACGTaGCGTGACTGGCTCTATGAT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFDAGIT*RDWLYD
Trigger: ATCATAGAGCCAGTCACGTCACGTGATGCCGGCATC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAAAGCTCCAGGCTGAATaGGTTCTGTCCTGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALKLQAE*VLSCSV
Trigger: AACCGAGCAGGACAGAACTCATTCAGCCTGGAGCTT...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTATTGTGGCTCCCTGAATaGGCAGGCAGATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLLWLPE*AGRCSR
Trigger: ACGGCTACATCTGCCTGCTCATTCAGGGAGCCACAA...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCTTGTGGCTCCCTGAATaGGCAGGCAGATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFLWLPE*AGRCSR
Trigger: ACGGCTACATCTGCCTGCTCATTCAGGGAGCCACAA...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGTTGGAACGCTGCTTTaGTGTCTAGTCCCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCVGTLL*CLVPGP
Trigger: CGGACCAGGGACTAGACATCAAAGCAGCGTTCCAAC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGGGAGAACCAATGTCCTaGTTAGCTGTTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRGEPMS*LAVSSS
Trigger: AGAAGAGGAAACAGCTAATCAGGACATTGGTTCTCC...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505667.6
CDS-3UTR GCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTATTGGATGAATCGAGGTaGAGCTGGGAAGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLLDESR*SWEVEG
Trigger: GCCCTCCACTTCCCAGCTGCACCTCGATTCATCCAA...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTTTGGATGAATCGAGGTaGAGCTGGGAAGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLLDESR*SWEVEG
Trigger: GCCCTCCACTTCCCAGCTGCACCTCGATTCATCCAA...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTGGATTTCACTCCCTTaGCGAAACCACTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAWISLP*RNHWTC
Trigger: GCAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR GCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGATTTGAAGGGCTGCCCTaGTCAGGCCTAACTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRFEGLP*SGLTQG
Trigger: ACCCTGAGTTAGGCCTGAGCAGGGCAGCCCTTCAAA...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR GCA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTGCGGCCCTGAGGGTTTaGAGCCATAATTGTATAATT +
Preference number: 4 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGAALRV*SHNCII
Trigger: AATTATACAATTATGGCTGCAAACCCTCAGGGCCGC...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTCTCCACAGCATGTGTaGTCCACAGCATGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSASPQHV*STACVL
Trigger: GAGCACACATGCTGTGGAGCACACATGCTGTGGAGA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCATCTCCACAGCATGTGTaGTCCACAGCATGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTASPQHV*STACVL
Trigger: GAGCACACATGCTGTGGAGCACACATGCTGTGGAGA...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATTTCGGAGTCGGCTATaGCTCTCCGGGCCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTFRSRL*LSGPGQ
Trigger: TTGACCTGGCCCGGAGAGCCATAGCCGACTCCGAAA...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACTTCTCTGCCAGAGGCTaGACAGGTGTTGACCTGTTA +
Preference number: 4 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHFSARG*TGVDLL
Trigger: TAACAGGTCAACACCTGTCCAGCCTCTGGCAGAGAA...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAGCTTTACGTTTGTGCTaGGAGTTTTTGCACCACGCT +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQALRLC*EFLHHA
Trigger: AGCGTGGTGCAAAAACTCCCAGCACAAACGTAAAGC...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAGCCTTGTCACACAGCTaGCTCTGGGGGCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQALSHS*LWGPPF
Trigger: AAAGGGTGGCCCCCAGAGCCAGCTGTGTGACAAGGC...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTGCCTTGTCACACAGCTaGCTCTGGGGGCCACCCTTT +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVALSHS*LWGPPF
Trigger: AAAGGGTGGCCCCCAGAGCCAGCTGTGTGACAAGGC...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACAGACTTGCGGTTGTGTaGCACTGCCAAGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDRLAVV*HCQVLV
Trigger: AACCAGGACTTGGCAGTGCCACACAACCGCAAGTCT...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTGCTATGATCAGGGTATaGAGGTCCCCTCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLAMIRV*RSPPSQ
Trigger: CTGTGAGGGAGGGGACCTCCATACCCTGATCATAGC...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGAGGTGACAACCAGCTaGGCAGTGCTGGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCEVTTS*AVLVAD
Trigger: ATCAGCAACCAGCACTGCCCAGCTGGTTGTCACCTC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACAACTCCACGGCTGGGATaGACTCCGTTCGTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTTPRLG*TPFVSL
Trigger: GAGGGAAACGAACGGAGTCCATCCCAGCCGTGGAGT...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTACATTCCAGCCGCACTaGGTACCCATCAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: NSKFLNDTWVFVLLVWFTTFQPH*VPISNS
Trigger: GGAGTTGCTGATGGGTACCCAGTGCGGCTGGAATGT...AGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCACATTCCAGCCGCACTaGGTACCCATCAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFTFQPH*VPISNS
Trigger: GGAGTTGCTGATGGGTACCCAGTGCGGCTGGAATGT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTACATTCCAGCCGCACTaGGTACCCATCAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCTFQPH*VPISNS
Trigger: GGAGTTGCTGATGGGTACCCAGTGCGGCTGGAATGT...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGTCAGGTGAGATGGGTTaGCCTCAGGTTGGAACGCTG +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLSGEMG*PQVGTL
Trigger: CAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGA...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCTCAGGTGAGATGGGTTaGCCTCAGGTTGGAACGCTG +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFSGEMG*PQVGTL
Trigger: CAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGA...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCATGCTCCAGTCGGATTTaGTTCTGGAGTTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTACSSRI*FWSCWS
Trigger: GCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCA...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR CCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTACCAGCTTGCAACTTCTaGGCTCTGAATGCGATCTCG +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALPACNF*ALNAIS
Trigger: CGAGATCGCATTCAGAGCCCAGAAGTTGCAAGCTGG...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCACACAGAACCATCAGTTaGGCGCAAAACGCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSHRTIS*AQNAVC
Trigger: GCAGACGGCGTTTTGCGCCCAACTGATGGTTCTGTG...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR TCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTAGGCTGGACAGGTGTTaGCCTGTTATCCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLRLDRC*PVILRS
Trigger: AGACCTCAGGATAACAGGTCAACACCTGTCCAGCCT...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCGGGCCACCCTTTCTTTaGTGTGGCGTTTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESGPPFL*CGVLGF
Trigger: AAAGCCCAAAACGCCACATCAAAGAAAGGGTGGCCC...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATAGCAGATGTTGTGTCTaGGCCGCTGGGATTCGTAGC +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNSRCCV*AAGIRS
Trigger: GCTACGAATCCCAGCGGCTCAGACACAACATCTGCT...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTAGGTCGGCAGAGATATaGAGTTGGACTGTGAACCTG +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSARSAEI*SWTVNL
Trigger: CAGGTTCACAGTCCAACTTCATATCTCTGCCGACCT...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGGCATTGAATTGCATTTaGAGGGCTGCCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLALNCI*RAALLR
Trigger: CCTGAGCAGGGCAGCCCTTCAAATGCAATTCAATGC...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAGCATTGAATTGCATTTaGAGGGCTGCCCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRALNCI*RAALLR
Trigger: CCTGAGCAGGGCAGCCCTTCAAATGCAATTCAATGC...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTCCCTCTCAGCAGCATTaGATTGCATTTGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAPSQQH*IAFEGL
Trigger: CAGCCCTTCAAATGCAATTCAATGCTGCTGAGAGGG...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTGGCTCCTTAGTGGGTaGAAGCAGGACAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVWLLSG*KQDSWC
Trigger: ACACCAGCTGTCCTGCTTTCACCCACTAAGGAGCCA...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGTCCTCTTCTGGCTCCTaGATATTAAAGACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRSSSGS*ILKTVA
Trigger: TGCAACTGTCTTTAATATTCAGGAGCCAGAAGAGGA...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCCAACTGATGCGGCCCTaGGGGTTTGCAGCCATAATT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFQLMRP*GFAAII
Trigger: AATTATGGCTGCAAACCCTCAGGGCCGCATCAGTTG...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTCAACTGATGCGGCCCTaGGGGTTTGCAGCCATAATT +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLQLMRP*GFAAII
Trigger: AATTATGGCTGCAAACCCTCAGGGCCGCATCAGTTG...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTCGACCTCTTTGGTTaGCAGCCTGTACCATTAGCC +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAFDLFG*QPVPLA
Trigger: GGCTAATGGTACAGGCTGTCAACCAAAGAGGTCGAA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCGTCTCCACTGTCCCTTaGTCTAGAACGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVVSTVP*SRTRPS
Trigger: AGAAGGCCTCGTTCTAGATCAAGGGACAGTGGAGAC...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGTCTCCACTGTCCCTTaGTCTAGAACGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCVSTVP*SRTRPS
Trigger: AGAAGGCCTCGTTCTAGATCAAGGGACAGTGGAGAC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCTGAAGAATCGCTCCTaGATTGGTTCATTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRLKNRS*IGSFSS
Trigger: AGACGAAAATGAACCAATTCAGGAGCGATTCTTCAG...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACGCAAGAAGTGAGGTCTaGAGAATCGCTCCTGAATTG +
Preference number: 4 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHARSEV*RIAPEL
Trigger: CAATTCAGGAGCGATTCTTCAGACCTCACTTCTTGC...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGGGTTGGTAACCCACTaGCTTTGCAGTCCATTCTGC +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSGLVTH*LCSPFC
Trigger: GCAGAATGGACTGCAAAGTCAGTGGGTTACCAACCC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp AATAATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCGATGCCGGCATCACGTaGCGTGACTGGCTCTATGAT +
Preference number: 4 (lower is better)
Translates to: NNSKFLNDTWVFVLLVWFDAGIT*RDWLYD
Trigger: ATCATAGAGCCAGTCACGTCACGTGATGCCGGCATC...GAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR TCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATGATGCCGGCATCACGTaGCGTGACTGGCTCTATGAT +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNDAGIT*RDWLYD
Trigger: ATCATAGAGCCAGTCACGTCACGTGATGCCGGCATC...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GCTAATAATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGAAGCTCCAGGCTGAATaGGTTCTGTCCTGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: ANNSKFLNDTWVFVLLVWKLQAE*VLSCSV
Trigger: AACCGAGCAGGACAGAACTCATTCAGCCTGGAGCTT...CCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATTATTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR TCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAAGCTCCAGGCTGAATaGGTTCTGTCCTGCTCGGTT +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESKLQAE*VLSCSV
Trigger: AACCGAGCAGGACAGAACTCATTCAGCCTGGAGCTT...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGTTCTTCCAAAATATCTaGGGTGGTGGCACTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKFFQNI*GGGTPN
Trigger: ATTGGGAGTGCCACCACCTCAGATATTTTGGAAGAA...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGGGTCAGTGCTGTGAGTaGGTGATTCATTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRGQCCE*VIHFLS
Trigger: AGAAAGAAAATGAATCACTCACTCACAGCACTGACC...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp AATAATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCTTGTGGCTCCCTGAATaGGCAGGCAGATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: NNSKFLNDTWVFVLLVWFLWLPE*AGRCSR
Trigger: ACGGCTACATCTGCCTGCTCATTCAGGGAGCCACAA...GAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR TCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATTTGTGGCTCCCTGAATaGGCAGGCAGATGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNLWLPE*AGRCSR
Trigger: ACGGCTACATCTGCCTGCTCATTCAGGGAGCCACAA...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGGTATTCAGTGTCAGGTaGGATGGGTTGGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLVFSVR*DGLASG
Trigger: ACCTGAGGCCAACCCATCTCACCTGACACTGAATAC...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAGTATTCAGTGTCAGGTaGGATGGGTTGGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRVFSVR*DGLASG
Trigger: ACCTGAGGCCAACCCATCTCACCTGACACTGAATAC...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGATGGCCCTGGGTTCCTTaGCTTGTGAATGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRWPWVP*LVNGSV
Trigger: AACACTGCCATTCACAAGTCAAGGAACCCAGGGCCA...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTTGGCCCTGGGTTCCTTaGCTTGTGAATGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLWPWVP*LVNGSV
Trigger: AACACTGCCATTCACAAGTCAAGGAACCCAGGGCCA...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGCAACTTCTGGGCTCTaGATGCGATCTCGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFATSGL*MRSRLQ
Trigger: CTGCAAACGAGATCGCATTCAGAGCCCAGAAGTTGC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR GCA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTTGTGCTGGGAGTTTTTaGACCACGCTTTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLCAGSF*TTLFSL
Trigger: AAGGCTGAAAAGCGTGGTGCAAAAACTCCCAGCACA...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTGCGGTTGTGTGGCACTaGCAAGTCCTGGTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVAVVWH*QVLVVL
Trigger: CAGGACAACCAGGACTTGGCAGTGCCACACAACCGC...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTAACTCGGCTCCCTTCTaGTACTTCTTGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLNSAPF*YFLAPQ
Trigger: CTGAGGAGCCAAGAAGTAGCAGAAGGGAGCCGAGTT...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTGCCACGGCTGTGTTTTaGAGTTCCTTTGTAAAAACA +
Preference number: 4 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGATAVF*SSFVKT
Trigger: TGTTTTTACAAAGGAACTGCAAAACACAGCCGTGGC...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCTGGATTTCACTCCCTTaGCGAAACCACTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESWISLP*RNHWTC
Trigger: GCAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCA...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTTGGATTTCACTCCCTTaGCGAAACCACTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLWISLP*RNHWTC
Trigger: GCAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCA...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTTCTATGATCAGAGAGTaGACCCCGTTCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: NSKFLNDTWVFVLLVWFTSMIRE*TPFSRT
Trigger: GGTGCGTGAGAACGGGGTGCACTCTCTGATCATAGA...AGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR GCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTATCTATGATCAGAGAGTaGACCCCGTTCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLSMIRE*TPFSRT
Trigger: GGTGCGTGAGAACGGGGTGCACTCTCTGATCATAGA...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCTCTATGATCAGAGAGTaGACCCCGTTCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFSMIRE*TPFSRT
Trigger: GGTGCGTGAGAACGGGGTGCACTCTCTGATCATAGA...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR GCA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTACATCTGCCACCCGGTaGTCAAGCCTATTAATCACT +
Preference number: 4 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLTSATR*SSLLIT
Trigger: AGTGATTAATAGGCTTGAGCACCGGGTGGCAGATGT...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACTTCTCTGCCAGAGGCTaGACAGGTGTTGACCTGTTA +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDFSARG*TGVDLL
Trigger: TAACAGGTCAACACCTGTCCAGCCTCTGGCAGAGAA...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGGCTTTACGTTTGTGCTaGGAGTTTTTGCACCACGCT +
Preference number: 4 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLALRLC*EFLHHA
Trigger: AGCGTGGTGCAAAAACTCCCAGCACAAACGTAAAGC...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGTTTGATGTGGCGTTTTaGGCTTTACGTTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKFDVAF*ALRLCW
Trigger: CCAGCACAAACGTAAAGCCCAAAACGCCACATCAAA...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAAGACTTGCGGTTGTGTaGCACTGCCAAGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLRLAVV*HCQVLV
Trigger: AACCAGGACTTGGCAGTGCCACACAACCGCAAGTCT...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGCTATGATCAGGGTATaGAGGTCCCCTCCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVAMIRV*RSPPSQ
Trigger: CTGTGAGGGAGGGGACCTCCATACCCTGATCATAGC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACGTTGAATCACAGCTGTaGTCACCCCTGTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDVESQL*SPLSLE
Trigger: CTCCAAAGACAGGGGTGACCACAGCTGTGATTCAAC...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACCACAGGGACAGACAGTaGTTGAATCACAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDHRDRQ*LNHSCG
Trigger: ACCACAGCTGTGATTCAACCACTGTCTGTCCCTGTG...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACAGAGGTGACAACCAGCTaGGCAGTGCTGGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTEVTTS*AVLVAD
Trigger: ATCAGCAACCAGCACTGCCCAGCTGGTTGTCACCTC...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTACATTTACTCCACGGCTaGGATGGACTCCGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALHLLHG*DGLRSF
Trigger: AAACGAACGGAGTCCATCCCAGCCGTGGAGTAAATG...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGGTAGTGATCACTCTTTaGAGAGATCTGCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKVVITL*RDLLPI
Trigger: GATGGGAAGCAGATCTCTCCAAAGAGTGATCACTAC...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTCATCATCATCTAGGGTaGAGGCTGTGGTATGGAGGG +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCHHHLG*RLWYGG
Trigger: CCCTCCATACCACAGCCTCCACCCTAGATGATGATG...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAAATATCTGAGGTGGTaGCACTCCCAATACACGACA +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQKYLRW*HSQYTT
Trigger: TGTCGTGTATTGGGAGTGCCACCACCTCAGATATTT...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTGTAAACGTCCAGCCTaGCAGTACAGGACACAATCC +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSACKRPA*QYRTQS
Trigger: GGATTGTGTCCTGTACTGCCAGGCTGGACGTTTACA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGTGCTGCATAGCGACTaGCTGAGGGCCGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSVLHSD*LRAVLF
Trigger: AAAAAGTACGGCCCTCAGCCAGTCGCTATGCAGCAC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGTGCTGCATAGCGACTaGCTGAGGGCCGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFVLHSD*LRAVLF
Trigger: AAAAAGTACGGCCCTCAGCCAGTCGCTATGCAGCAC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGGTGCTGCATAGCGACTaGCTGAGGGCCGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLVLHSD*LRAVLF
Trigger: AAAAAGTACGGCCCTCAGCCAGTCGCTATGCAGCAC...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGTGCTGCATAGCGACTaGCTGAGGGCCGTACTTTTT +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCVLHSD*LRAVLF
Trigger: AAAAAGTACGGCCCTCAGCCAGTCGCTATGCAGCAC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCGGGTTGGCCTCAGGTTaGAACGCTGCTTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESGLASG*NAALMS
Trigger: AGACATCAAAGCAGCGTTCCAACCTGAGGCCAACCC...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGGGTTGGCCTCAGGTTaGAACGCTGCTTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCGLASG*NAALMS
Trigger: AGACATCAAAGCAGCGTTCCAACCTGAGGCCAACCC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCACAGTGTCAGGTGAGATaGGTTGGCCTCAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPQCQVR*VGLRLE
Trigger: TTCCAACCTGAGGCCAACCCATCTCACCTGACACTG...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTCAGTGTCAGGTGAGATaGGTTGGCCTCAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLQCQVR*VGLRLE
Trigger: TTCCAACCTGAGGCCAACCCATCTCACCTGACACTG...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGACAGTGTCAGGTGAGATaGGTTGGCCTCAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRQCQVR*VGLRLE
Trigger: TTCCAACCTGAGGCCAACCCATCTCACCTGACACTG...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCACAGTGTCAGGTGAGATaGGTTGGCCTCAGGTTGGAA +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSQCQVR*VGLRLE
Trigger: TTCCAACCTGAGGCCAACCCATCTCACCTGACACTG...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTACGGAGAAAATTAACTaGCAGCCGCGCTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSATEKIN*QPRCQK
Trigger: CTTTTGGCAGCGCGGCTGCCAGTTAATTTTCTCCGT...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR CCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTACAAACAAGCTCCTCTTaGGGGTCTTTCAGATCTCGC +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALQTSSS*GSFRSR
Trigger: GCGAGATCTGAAAGACCCCCAAGAGGAGCTTGTTTG...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR TCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAGTTGACCTGTTATCCTaGGGTCTCCTCGAGGCGTGT +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQVDLLS*GLLEAC
Trigger: ACACGCCTCGAGGAGACCTCAGGATAACAGGTCAAC...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATTCCTCAGCTTTTGGATaGATCGAGGTGCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNSSAFG*IEVQLG
Trigger: TCCCAGCTGCACCTCGATTCATCCAAAAGCTGAGGA...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTCAAAGGCCTCTGCTATaGTCAGGGTATGGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVQRPLL*SGYGGP
Trigger: GGGACCTCCATACCCTGATCATAGCAGAGGCCTTTG...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTAGCAGATGTTGTGTCTaGGCCGCTGGGATTCGTAGC +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVSRCCV*AAGIRS
Trigger: GCTACGAATCCCAGCGGCTCAGACACAACATCTGCT...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACAACTGGCACCTTCAATaGACACCTCAGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDNWHLQ*TPQQML
Trigger: CAACATCTGCTGAGGTGTTCATTGAAGGTGCCAGTT...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTAACTGGCACCTTCAATaGACACCTCAGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSANWHLQ*TPQQML
Trigger: CAACATCTGCTGAGGTGTTCATTGAAGGTGCCAGTT...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGACTGTCAGAATCTGTTaGACTGGCACCTTCAATGAA +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKTVRIC*TGTFNE
Trigger: TTCATTGAAGGTGCCAGTTCAACAGATTCTGACAGT...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTAGGTCGGCAGAGATATaGAGTTGGACTGTGAACCTG +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLRSAEI*SWTVNL
Trigger: CAGGTTCACAGTCCAACTTCATATCTCTGCCGACCT...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGAGGTCGGCAGAGATATaGAGTTGGACTGTGAACCTG +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLRSAEI*SWTVNL
Trigger: CAGGTTCACAGTCCAACTTCATATCTCTGCCGACCT...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCCCCTCTCAGCAGCATTaGATTGCATTTGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVPSQQH*IAFEGL
Trigger: CAGCCCTTCAAATGCAATTCAATGCTGCTGAGAGGG...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTCCCTCTCAGCAGCATTaGATTGCATTTGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCPSQQH*IAFEGL
Trigger: CAGCCCTTCAAATGCAATTCAATGCTGCTGAGAGGG...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCATCCTTTGTGCCTTaGATTTCCTCATCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSASFVP*ISSSEA
Trigger: AGCCTCCGATGAGGAAATTCAAGGCACAAAGGATGC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTGCATCCTTTGTGCCTTaGATTTCCTCATCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLASFVP*ISSSEA
Trigger: AGCCTCCGATGAGGAAATTCAAGGCACAAAGGATGC...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAATTTCGTTCCAGGTCTTaGATAACAGCATCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQFRSRS*ITASFV
Trigger: CACAAAGGATGCTGTTATTCAAGACCTGGAACGAAA...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGATCAGGAGGTCCTCCTTaGAGCGAAGTTTTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRSGGPP*SEVFVP
Trigger: TGGAACGAAAACTTCGCTTCAAGGAGGACCTCCTGA...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTCAGGAGGTCCTCCTTaGAGCGAAGTTTTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCSGGPP*SEVFVP
Trigger: TGGAACGAAAACTTCGCTTCAAGGAGGACCTCCTGA...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCTCAGGAGGTCCTCCTTaGAGCGAAGTTTTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFSGGPP*SEVFVP
Trigger: TGGAACGAAAACTTCGCTTCAAGGAGGACCTCCTGA...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGTCCTCTTCTGGCTCCTaGATATTAAAGACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKSSSGS*ILKTVA
Trigger: TGCAACTGTCTTTAATATTCAGGAGCCAGAAGAGGA...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCACTGAACTTCATCACCTaGTTCATCCACAGGAGACCT +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTALNFIT*FIHRRP
Trigger: AGGTCTCCTGTGGATGAATCAGGTGATGAAGTTCAG...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACGGCACATCTCCATACTaGACTTCATCACCTGATTCA +
Preference number: 4 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHGTSPY*TSSPDS
Trigger: TGAATCAGGTGATGAAGTTCAGTATGGAGATGTGCC...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGTTCGACCTCTTTGGTTaGCAGCCTGTACCATTAGCC +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLFDLFG*QPVPLA
Trigger: GGCTAATGGTACAGGCTGTCAACCAAAGAGGTCGAA...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCTTCGACCTCTTTGGTTaGCAGCCTGTACCATTAGCC +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESFDLFG*QPVPLA
Trigger: GGCTAATGGTACAGGCTGTCAACCAAAGAGGTCGAA...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAACTGAAGAATCGCTCCTaGATTGGTTCATTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQLKNRS*IGSFSS
Trigger: AGACGAAAATGAACCAATTCAGGAGCGATTCTTCAG...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTTTCTTGCTTTCTTCCTaGATGTCTGAGAGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLFLLSS*MSERES
Trigger: TGACTCCCTCTCAGACATGCAGGAAGAAAGCAAGAA...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTAGAAGTCAGTATTCTTaGTTTCTTCCTGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGRSQYS*FLPACL
Trigger: CAGACATGCAGGAAGAAAGCAAGAATACTGACTTCT...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACTGTGCTGGGAGTTTTTaGACCACGCTTTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDCAGSF*TTLFSL
Trigger: AAGGCTGAAAAGCGTGGTGCAAAAACTCCCAGCACA...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACTGGGCTTTACGTTTGTaGTGGGAGTTTTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDWALRL*WEFLHH
Trigger: GTGGTGCAAAAACTCCCAGCACAAACGTAAAGCCCA...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCAACCAGCTGGGCAGTaGTGGTTGCTGATCCATAAT +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLQPAGQ*WLLIHN
Trigger: ATTATGGATCAGCAACCAGCACTGCCCAGCTGGTTG...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGACAACCAGCTGGGCAGTaGTGGTTGCTGATCCATAAT +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRQPAGQ*WLLIHN
Trigger: ATTATGGATCAGCAACCAGCACTGCCCAGCTGGTTG...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR GCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTCAACCAGCTGGGCAGTaGTGGTTGCTGATCCATAAT +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCQPAGQ*WLLIHN
Trigger: ATTATGGATCAGCAACCAGCACTGCCCAGCTGGTTG...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR GCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTGGCTTTCCATCTAGTTaGCAGCTTAGATCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAGFPSS*QLRSGV
Trigger: AACCCCAGATCTAAGCTGGCAACTAGATGGAAAGCC...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR GCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATTCTATGATCAGAGAGTaGACCCCGTTCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNSMIRE*TPFSRT
Trigger: GGTGCGTGAGAACGGGGTGCACTCTCTGATCATAGA...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATCTATGATCAGAGAGTaGACCCCGTTCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTSMIRE*TPFSRT
Trigger: GGTGCGTGAGAACGGGGTGCACTCTCTGATCATAGA...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCACAGGGGGTTTGTGTaGTTCTTTAGCAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLHRGFV*FFSSNH
Trigger: GTGGTTGCTGCTAAAGAAGCACACAAACCCCCTGTG...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTCACAGGGGGTTTGTGTaGTTCTTTAGCAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: NSKFLNDTWVFVLLVWFTHRGFV*FFSSNH
Trigger: GTGGTTGCTGCTAAAGAAGCACACAAACCCCCTGTG...AGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR GCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTACACAGGGGGTTTGTGTaGTTCTTTAGCAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLHRGFV*FFSSNH
Trigger: GTGGTTGCTGCTAAAGAAGCACACAAACCCCCTGTG...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGACACAGGGGGTTTGTGTaGTTCTTTAGCAGCAACCAC +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRHRGFV*FFSSNH
Trigger: GTGGTTGCTGCTAAAGAAGCACACAAACCCCCTGTG...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR GCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATCTCCACAGCATGTGTaGTCCACAGCATGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTSPQHV*STACVL
Trigger: GAGCACACATGCTGTGGAGCACACATGCTGTGGAGA...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGGCAATTTCTCATTTATaGCACCATGCAGTCTCAATC +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRAISHL*HHAVSI
Trigger: GATTGAGACTGCATGGTGGCATAAATGAGAAATTGC...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACAAACTTGAACCACACTaGATAGAACATCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHKLEPH*IEHLPP
Trigger: GGGTGGCAGATGTTCTATGCAGTGTGGTTCAAGTTT...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTCTTCTGGGCTCTGAATaGGATCTCGTTTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSALLGSE*DLVCRM
Trigger: CATTCTGCAAACGAGATCGCATTCAGAGCCCAGAAG...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR CCA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTCTTTTCTGGGAGAATaGAGGTTGTGGCCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNSFLGE*RLWPCL
Trigger: TAGGCAAGGCCACAACCTCCATTCTCCCAGAAAAGA...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTGTTGAATCACAGCTGTaGTCACCCCTGTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLVESQL*SPLSLE
Trigger: CTCCAAAGACAGGGGTGACCACAGCTGTGATTCAAC...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGTTGAATCACAGCTGTaGTCACCCCTGTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSVESQL*SPLSLE
Trigger: CTCCAAAGACAGGGGTGACCACAGCTGTGATTCAAC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCACACAGGGACAGACAGTaGTTGAATCACAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPHRDRQ*LNHSCG
Trigger: ACCACAGCTGTGATTCAACCACTGTCTGTCCCTGTG...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCCACAGGGACAGACAGTaGTTGAATCACAGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFHRDRQ*LNHSCG
Trigger: ACCACAGCTGTGATTCAACCACTGTCTGTCCCTGTG...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACAAATCTGGAGAGTCTTaGATTTCACTCCCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHKSGES*ISLPCR
Trigger: TCGGCAAGGGAGTGAAATCCAAGACTCTCCAGATTT...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGAAATCTGGAGAGTCTTaGATTTCACTCCCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLKSGES*ISLPCR
Trigger: TCGGCAAGGGAGTGAAATCCAAGACTCTCCAGATTT...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCACCAGCTGGGCAGTGCTaGTTGCTGATCCATAATCAT +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSPAGQC*LLIHNH
Trigger: ATGATTATGGATCAGCAACCAGCACTGCCCAGCTGG...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCCCAGCTGGGCAGTGCTaGTTGCTGATCCATAATCAT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFPAGQC*LLIHNH
Trigger: ATGATTATGGATCAGCAACCAGCACTGCCCAGCTGG...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCACATTTACTCCACGGCTaGGATGGACTCCGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSHLLHG*DGLRSF
Trigger: AAACGAACGGAGTCCATCCCAGCCGTGGAGTAAATG...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTATCCTAGTTTTGGTTTaGCAAGCAGAGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAILVLV*QAEVVA
Trigger: AGCCACCACCTCTGCTTGCCAAACCAAAACTAGGAT...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCATATGTTAACCTCGGCTaGCCATTGTTCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSYVNLG*PLFRRS
Trigger: GGACCTCCTGAACAATGGCCAGCCGAGGTTAACATA...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCTATGTTAACCTCGGCTaGCCATTGTTCAGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFYVNLG*PLFRRS
Trigger: GGACCTCCTGAACAATGGCCAGCCGAGGTTAACATA...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAGGACTTCGACCTCTTTaGTTGACAGCCTGTACCATT +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALGLRPL*LTACTI
Trigger: AATGGTACAGGCTGTCAACCAAAGAGGTCGAAGTCC...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTACCAAAATATCTGAGGTaGTGGCACTCCCAATACACG +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALPKYLR*WHSQYT
Trigger: CGTGTATTGGGAGTGCCACCACCTCAGATATTTTGG...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTTGTAAACGTCCAGCCTaGCAGTACAGGACACAATCC +
Preference number: 4 (lower is better)
Translates to: NSKFLNDTWVFVLLVWFTCKRPA*QYRTQS
Trigger: GGATTGTGTCCTGTACTGCCAGGCTGGACGTTTACA...AGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR CCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTTGTAAACGTCCAGCCTaGCAGTACAGGACACAATCC +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLCKRPA*QYRTQS
Trigger: GGATTGTGTCCTGTACTGCCAGGCTGGACGTTTACA...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCACTGATGCCACTGGGTTaGGTATTTGTTCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPLMPLG*VFVLLV
Trigger: CACCAGGAGAACAAATACCCAACCCAGTGGCATCAG...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTCATTAGAGACTGCCTaGTCCGTGGTCACTTTGAGG +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCSLETA*SVVTLR
Trigger: CCTCAAAGTGACCACGGACCAGGCAGTCTCTAATGA...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505667.6
CDS-3UTR TCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAAATGCTTGGTCAGTTTaGAGACTCCAGAGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALNAWSV*RLQRGD
Trigger: ATCACCTCTCTGGAGTCTTCAAACTGACCAAGCATT...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCTTCTTCCTGCATGTCTaGGAGGGAGTCATAGAAGGA +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFFFLHV*EGVIEG
Trigger: TCCTTCTATGACTCCCTCTCAGACATGCAGGAAGAA...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTTTCTTCCTGCATGTCTaGGAGGGAGTCATAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLFFLHV*EGVIEG
Trigger: TCCTTCTATGACTCCCTCTCAGACATGCAGGAAGAA...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTAGGCTGGACAGGTGTTaGCCTGTTATCCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVRLDRC*PVILRS
Trigger: AGACCTCAGGATAACAGGTCAACACCTGTCCAGCCT...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTGGGCCACCCTTTCTTTaGTGTGGCGTTTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVGPPFL*CGVLGF
Trigger: AAAGCCCAAAACGCCACATCAAAGAAAGGGTGGCCC...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTTCCTCAGCTTTTGGATaGATCGAGGTGCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVSSAFG*IEVQLG
Trigger: TCCCAGCTGCACCTCGATTCATCCAAAAGCTGAGGA...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGAGTGGGGTTTCCAGTaGCTCTACACTCCAGATAAA +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCEWGFQ*LYTPDK
Trigger: TTTATCTGGAGTGTAGAGTCACTGGAAACCCCACTC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGAGTGGGGTTTCCAGTaGCTCTACACTCCAGATAAA +
Preference number: 4 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPEWGFQ*LYTPDK
Trigger: TTTATCTGGAGTGTAGAGTCACTGGAAACCCCACTC...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTAAACTGGCACCTTCAATaGACACCTCAGCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLNWHLQ*TPQQML
Trigger: CAACATCTGCTGAGGTGTTCATTGAAGGTGCCAGTT...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTGAAGTTGTTTTCTTTTaGGCTTGTGGCATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLEVVFF*ACGIAP
Trigger: TGGAGCTATGCCACAAGCTCAAAAGAAAACAACTTC...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTATAATCATTTCTTGCTaGACATGTAAAGATCCCTGC +
Preference number: 4 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGIIISC*TCKDPC
Trigger: GCAGGGATCTTTACATGTTCAGCAAGAAATGATTAT...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGGCAGTGCTGGTTGCTaGTCCATAATCATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPGSAGC*SIIISC
Trigger: GCAAGAAATGATTATGGATCAGCAACCAGCACTGCC...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGCATCCTTTGTGCCTTaGATTTCCTCATCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVASFVP*ISSSEA
Trigger: AGCCTCCGATGAGGAAATTCAAGGCACAAAGGATGC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTGAACTTCATCACCTaGTTCATCCACAGGAGACCT +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLLNFIT*FIHRRP
Trigger: AGGTCTCCTGTGGATGAATCAGGTGATGAAGTTCAG...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTCTGAACTTCATCACCTaGTTCATCCACAGGAGACCT +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCLNFIT*FIHRRP
Trigger: AGGTCTCCTGTGGATGAATCAGGTGATGAAGTTCAG...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGGCAAGAAGTGAGGTCTaGAGAATCGCTCCTGAATTG +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLARSEV*RIAPEL
Trigger: CAATTCAGGAGCGATTCTTCAGACCTCACTTCTTGC...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCAAGAAGTGAGGTCTaGAGAATCGCTCCTGAATTG +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSARSEV*RIAPEL
Trigger: CAATTCAGGAGCGATTCTTCAGACCTCACTTCTTGC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAGCAAGAAGTGAGGTCTaGAGAATCGCTCCTGAATTG +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRARSEV*RIAPEL
Trigger: CAATTCAGGAGCGATTCTTCAGACCTCACTTCTTGC...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTCTTCCAAAATATCTaGGGTGGTGGCACTCCCAAT +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAFFQNI*GGGTPN
Trigger: ATTGGGAGTGCCACCACCTCAGATATTTTGGAAGAA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGTTCACTGTATCTGTCTaGATACACTGTGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKFTVSV*IHCASE
Trigger: TTCTGAAGCACAGTGTATTCAGACAGATACAGTGAA...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGTCAACTCAGTCTAGCTaGTGCAAAATCATATGCATT +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRSTQSS*CKIICI
Trigger: AATGCATATGATTTTGCATCAGCTAGACTGAGTTGA...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACGCGGTCAAAGAAACTTaGACCACACTGCATAGAACA +
Preference number: 4 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNAVKET*TTLHRT
Trigger: TGTTCTATGCAGTGTGGTTCAAGTTTCTTTGACCGC...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTATGGAGGTTGTGGCCTTaGCTATTCATTAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLWRLWP*LFIRDC
Trigger: GCAGTCTCTAATGAATAGGCAAGGCCACAACCTCCA...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTATGTGCTGGGAGTTTTTaGACCACGCTTTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLCAGSF*TTLFSL
Trigger: AAGGCTGAAAAGCGTGGTGCAAAAACTCCCAGCACA...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGTGGGCTTTACGTTTGTaGTGGGAGTTTTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLWALRL*WEFLHH
Trigger: GTGGTGCAAAAACTCCCAGCACAAACGTAAAGCCCA...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTAACTCGGCTCCCTTCTaGTACTTCTTGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVNSAPF*YFLAPQ
Trigger: CTGAGGAGCCAAGAAGTAGCAGAAGGGAGCCGAGTT...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTTGGATTTCACTCCCTTaGCGAAACCACTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVWISLP*RNHWTC
Trigger: GCAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCA...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGATCAGGGTTGTTCACCTaGTGGATCTCAGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRSGLFT*WISDGF
Trigger: GAAACCATCTGAGATCCAGCAGGTGAACAACCCTGA...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR GCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAACTCTTTGGAGAGATCTaGTTCCCATCTTTAAACCAA +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQLFGEI*FPSLNQ
Trigger: TTGGTTTAAAGATGGGAAGCAGATCTCTCCAAAGAG...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAGCGGCCCTGAGGGTTTaGAGCCATAATTGTATAATT +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALAALRV*SHNCII
Trigger: AATTATACAATTATGGCTGCAAACCCTCAGGGCCGC...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR GCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCGGCTTTCCATCTAGTTaGCAGCTTAGATCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVGFPSS*QLRSGV
Trigger: AACCCCAGATCTAAGCTGGCAACTAGATGGAAAGCC...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAGGCTTTCCATCTAGTTaGCAGCTTAGATCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRGFPSS*QLRSGV
Trigger: AACCCCAGATCTAAGCTGGCAACTAGATGGAAAGCC...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR GCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGGCTTTCCATCTAGTTaGCAGCTTAGATCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSGFPSS*QLRSGV
Trigger: AACCCCAGATCTAAGCTGGCAACTAGATGGAAAGCC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR GCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAAAACCTCAGACACACTaGAATCTCCACAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALKPQTH*NLHSMC
Trigger: ACACATGCTGTGGAGATTGCAGTGTGTCTGAGGTTT...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGTCATTTATGCCACCATaGAGTCTCAATCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRSFMPP*SLNPFS
Trigger: TGAAAATGGATTGAGACTGCATGGTGGCATAAATGA...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCACATCTGCCACCCGGTaGTCAAGCCTATTAATCACT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFTSATR*SSLLIT
Trigger: AGTGATTAATAGGCTTGAGCACCGGGTGGCAGATGT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTCTTTTCTGGGAGAATaGAGGTTGTGGCCTTGCCTA +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCSFLGE*RLWPCL
Trigger: TAGGCAAGGCCACAACCTCCATTCTCCCAGAAAAGA...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACCGTGTTCACCCAATTTaGTCTCCTTATGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDRVHPI*SPYGKD
Trigger: ATCCTTCCCATAAGGAGACCAAATTGGGTGAACACG...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATTCTCTGCCAGAGGCTaGACAGGTGTTGACCTGTTA +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTFSARG*TGVDLL
Trigger: TAACAGGTCAACACCTGTCCAGCCTCTGGCAGAGAA...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTGCTTTACGTTTGTGCTaGGAGTTTTTGCACCACGCT +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLALRLC*EFLHHA
Trigger: AGCGTGGTGCAAAAACTCCCAGCACAAACGTAAAGC...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTTGATGTGGCGTTTTaGGCTTTACGTTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAFDVAF*ALRLCW
Trigger: CCAGCACAAACGTAAAGCCCAAAACGCCACATCAAA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACTTTGATGTGGCGTTTTaGGCTTTACGTTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDFDVAF*ALRLCW
Trigger: CCAGCACAAACGTAAAGCCCAAAACGCCACATCAAA...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACACATTTACTCCACGGCTaGGATGGACTCCGTTCGTTT +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTHLLHG*DGLRSF
Trigger: AAACGAACGGAGTCCATCCCAGCCGTGGAGTAAATG...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAACAGGACAGCTGGTGTTaGAAGAGATTTATTACTGTT +
Preference number: 4 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQQDSWC*KRFITV
Trigger: AACAGTAATAAATCTCTTCCAACACCAGCTGTCCTG...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCATCCTAGTTTTGGTTTaGCAAGCAGAGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVILVLV*QAEVVA
Trigger: AGCCACCACCTCTGCTTGCCAAACCAAAACTAGGAT...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCATCCTAGTTTTGGTTTaGCAAGCAGAGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFILVLV*QAEVVA
Trigger: AGCCACCACCTCTGCTTGCCAAACCAAAACTAGGAT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGGGACTTCGACCTCTTTaGTTGACAGCCTGTACCATT +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLGLRPL*LTACTI
Trigger: AATGGTACAGGCTGTCAACCAAAGAGGTCGAAGTCC...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTAGGACTTCGACCTCTTTaGTTGACAGCCTGTACCATT +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLGLRPL*LTACTI
Trigger: AATGGTACAGGCTGTCAACCAAAGAGGTCGAAGTCC...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTCCAAAATATCTGAGGTaGTGGCACTCCCAATACACG +
Preference number: 4 (lower is better)
Translates to: NSKFLNDTWVFVLLVWFTPKYLR*WHSQYT
Trigger: CGTGTATTGGGAGTGCCACCACCTCAGATATTTTGG...AGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR CCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGACCAAAATATCTGAGGTaGTGGCACTCCCAATACACG +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRPKYLR*WHSQYT
Trigger: CGTGTATTGGGAGTGCCACCACCTCAGATATTTTGG...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATGTAAACGTCCAGCCTaGCAGTACAGGACACAATCC +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTCKRPA*QYRTQS
Trigger: GGATTGTGTCCTGTACTGCCAGGCTGGACGTTTACA...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCATGTTGGTCAAGGCAATaGCTGTTTCAGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTACWSRQ*LFQCFS
Trigger: GCTGAAACACTGAAACAGCCATTGCCTTGACCAACA...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTACCTTGGTCATTTGGGTaGTTTGGATGCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLPWSFG*FGCFLW
Trigger: CCACAGAAAGCATCCAAACCACCCAAATGACCAAGG...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTCCTTGGTCATTTGGGTaGTTTGGATGCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLPWSFG*FGCFLW
Trigger: CCACAGAAAGCATCCAAACCACCCAAATGACCAAGG...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTAAACCAAAGAAAAGCCTaGCCTTTGCTACCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLNQRKA*PLLPLL
Trigger: CAGGAGAGGTAGCAAAGGCCAGGCTTTTCTTTGGTT...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAAACCAAAGAAAAGCCTaGCCTTTGCTACCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRNQRKA*PLLPLL
Trigger: CAGGAGAGGTAGCAAAGGCCAGGCTTTTCTTTGGTT...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR CAA 72 bp CAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTaGGAATCCAGCACCTTCTTAAGGCAAAGTTTCATG +
Preference number: 4 (lower is better)
Translates to: QKAVFTEMPLQT*ESSTFLRQSFM
Trigger: CATGAAACTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCTTGCAGGAGAAGTACTaGAAATCTGCGAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFLQEKY*KSARSP
Trigger: AGGAGATCTCGCAGATTTTCAGTACTTCTCCTGCAA...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACTGTCAGAATCTGTTaGACTGGCACCTTCAATGAA +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALTVRIC*TGTFNE
Trigger: TTCATTGAAGGTGCCAGTTCAACAGATTCTGACAGT...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTCTCCAGCTCTTGATTTaGAAGCTAAACTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLLQLLI*KLNFHC
Trigger: ACAGTGAAAGTTTAGCTTTCAAATCAAGAGCTGGAG...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACGAAGTTGTTTTCTTTTaGGCTTGTGGCATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDEVVFF*ACGIAP
Trigger: TGGAGCTATGCCACAAGCTCAAAAGAAAACAACTTC...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTGAAGTTGTTTTCTTTTaGGCTTGTGGCATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAEVVFF*ACGIAP
Trigger: TGGAGCTATGCCACAAGCTCAAAAGAAAACAACTTC...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTAGGTCGGCAGAGATATaGAGTTGGACTGTGAACCTG +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVRSAEI*SWTVNL
Trigger: CAGGTTCACAGTCCAACTTCATATCTCTGCCGACCT...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGGCAGTGCTGGTTGCTaGTCCATAATCATTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVGSAGC*SIIISC
Trigger: GCAAGAAATGATTATGGATCAGCAACCAGCACTGCC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTCTCAGATGGTTTCTTTaGAGCCAACTCCAAGGAACT +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLLRWFL*SQLQGT
Trigger: AGTTCCTTGGAGTTGGCTTCAAAGAAACCATCTGAG...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTACTCAGATGGTTTCTTTaGAGCCAACTCCAAGGAACT +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLLRWFL*SQLQGT
Trigger: AGTTCCTTGGAGTTGGCTTCAAAGAAACCATCTGAG...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCACTCAGATGGTTTCTTTaGAGCCAACTCCAAGGAACT +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSLRWFL*SQLQGT
Trigger: AGTTCCTTGGAGTTGGCTTCAAAGAAACCATCTGAG...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTCCTCTTCTGGCTCCTaGATATTAAAGACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNSSSGS*ILKTVA
Trigger: TGCAACTGTCTTTAATATTCAGGAGCCAGAAGAGGA...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCGGCACATCTCCATACTaGACTTCATCACCTGATTCA +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESGTSPY*TSSPDS
Trigger: TGAATCAGGTGATGAAGTTCAGTATGGAGATGTGCC...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGGCACATCTCCATACTaGACTTCATCACCTGATTCA +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSGTSPY*TSSPDS
Trigger: TGAATCAGGTGATGAAGTTCAGTATGGAGATGTGCC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTCAGCCACTCTACATGTaGAAGTTACTGGCATTCCCT +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVQPLYM*KLLAFP
Trigger: AGGGAATGCCAGTAACTTTCACATGTAGAGTGGCTG...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTTTCTTCCAAAATATCTaGGGTGGTGGCACTCCCAAT +
Preference number: 4 (lower is better)
Translates to: NSKFLNDTWVFVLLVWFTFFQNI*GGGTPN
Trigger: ATTGGGAGTGCCACCACCTCAGATATTTTGGAAGAA...AGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR TCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACTTCACTGTATCTGTCTaGATACACTGTGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHFTVSV*IHCASE
Trigger: TTCTGAAGCACAGTGTATTCAGACAGATACAGTGAA...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAGCGGTCAAAGAAACTTaGACCACACTGCATAGAACA +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLAVKET*TTLHRT
Trigger: TGTTCTATGCAGTGTGGTTCAAGTTTCTTTGACCGC...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCACTTTGTATTCCTTTTaGCCATCCAGAGGACTCCCT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFTLYSF*PSRGLP
Trigger: AGGGAGTCCTCTGGATGGTCAAAAGGAATACAAAGT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505667.6
CDS-3UTR TCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACAAAGCCATGAGGAAATaGGATGAGCCAGGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDKAMRK*DEPGCN
Trigger: ATTACAACCTGGCTCATCTCATTTCCTCATGGCTTT...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCATTCTTGCTTTCTTCCTaGATGTCTGAGAGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSFLLSS*MSERES
Trigger: TGACTCCCTCTCAGACATGCAGGAAGAAAGCAAGAA...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTAGAAGTCAGTATTCTTaGTTTCTTCCTGCATGTCTG +
Preference number: 4 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLRSQYS*FLPACL
Trigger: CAGACATGCAGGAAGAAAGCAAGAATACTGACTTCT...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATTGGGCTTTACGTTTGTaGTGGGAGTTTTTGCACCAC +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNWALRL*WEFLHH
Trigger: GTGGTGCAAAAACTCCCAGCACAAACGTAAAGCCCA...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAATATCAGGAGTGTTGTaGAGTTCTTTCCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALISGVL*SSFPSQ
Trigger: CTGTGAAGGGAAAGAACTGCACAACACTCCTGATAT...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR GCA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACGCCACGGCTGTGTTTTaGAGTTCCTTTGTAAAAACA +
Preference number: 4 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNATAVF*SSFVKT
Trigger: TGTTTTTACAAAGGAACTGCAAAACACAGCCGTGGC...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATTCAGGGTTGTTCACCTaGTGGATCTCAGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNSGLFT*WISDGF
Trigger: GAAACCATCTGAGATCCAGCAGGTGAACAACCCTGA...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACCATCTCAAAGAATGGTaGCATTCCATTTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNHLKEW*HSIFHR
Trigger: CCTGTGGAAAATGGAATGGCACCATTCTTTGAGATG...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCGCGGCCCTGAGGGTTTaGAGCCATAATTGTATAATT +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESAALRV*SHNCII
Trigger: AATTATACAATTATGGCTGCAAACCCTCAGGGCCGC...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAGCGGCCCTGAGGGTTTaGAGCCATAATTGTATAATT +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRAALRV*SHNCII
Trigger: AATTATACAATTATGGCTGCAAACCCTCAGGGCCGC...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR GCA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTTGTCTGAATACACTGTaGTTCAGAATCATTGTAGTA +
Preference number: 4 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGCLNTL*FRIIVV
Trigger: TACTACAATGATTCTGAAGCACAGTGTATTCAGACA...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTCAGTCTTTACCGAGATaGCTTTACAAACCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLQSLPR*LYKPWN
Trigger: ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTG...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACAACATCTGCCACCCGGTaGTCAAGCCTATTAATCACT +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTTSATR*SSLLIT
Trigger: AGTGATTAATAGGCTTGAGCACCGGGTGGCAGATGT...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCAAACTTGAACCACACTaGATAGAACATCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVKLEPH*IEHLPP
Trigger: GGGTGGCAGATGTTCTATGCAGTGTGGTTCAAGTTT...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAAAACTTGAACCACACTaGATAGAACATCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRKLEPH*IEHLPP
Trigger: GGGTGGCAGATGTTCTATGCAGTGTGGTTCAAGTTT...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTATTCATTAGAGACTaGCTGGTCCGTGGTCACTTT +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLLFIRD*LVRGHF
Trigger: AAAGTGACCACGGACCAGGCAGTCTCTAATGAATAG...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505667.6
CDS-3UTR CCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACAATTTGGTCTCCTTATaGGAAGGATGTTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDNLVSL*EGCSQR
Trigger: CCTCTGTGAACATCCTTCCCATAAGGAGACCAAATT...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCCGTGTTCACCCAATTTaGTCTCCTTATGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVRVHPI*SPYGKD
Trigger: ATCCTTCCCATAAGGAGACCAAATTGGGTGAACACG...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCACGTGTTCACCCAATTTaGTCTCCTTATGGGAAGGAT +
Preference number: 4 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPRVHPI*SPYGKD
Trigger: ATCCTTCCCATAAGGAGACCAAATTGGGTGAACACG...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCAACCCTTTCTTTGATGTaGCGTTTTGGGCTTTACGTT +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTATLSLM*RFGLYV
Trigger: AACGTAAAGCCCAAAACGCCACATCAAAGAAAGGGT...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTACCCTTTCTTTGATGTaGCGTTTTGGGCTTTACGTT +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSATLSLM*RFGLYV
Trigger: AACGTAAAGCCCAAAACGCCACATCAAAGAAAGGGT...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACACCCTTTCTTTGATGTaGCGTTTTGGGCTTTACGTT +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDTLSLM*RFGLYV
Trigger: AACGTAAAGCCCAAAACGCCACATCAAAGAAAGGGT...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCTTCTGCTACTTCTTaGCTCCTCAGCTTTTGGATG +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNPSATS*LLSFWM
Trigger: CATCCAAAAGCTGAGGAGCCAAGAAGTAGCAGAAGG...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTCCTTCTGCTACTTCTTaGCTCCTCAGCTTTTGGATG +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVPSATS*LLSFWM
Trigger: CATCCAAAAGCTGAGGAGCCAAGAAGTAGCAGAAGG...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAGTTGAATCACAGCTGTaGTCACCCCTGTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQVESQL*SPLSLE
Trigger: CTCCAAAGACAGGGGTGACCACAGCTGTGATTCAAC...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAAATCTGGAGAGTCTTaGATTTCACTCCCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESKSGES*ISLPCR
Trigger: TCGGCAAGGGAGTGAAATCCAAGACTCTCCAGATTT...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAAATCTGGAGAGTCTTaGATTTCACTCCCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFKSGES*ISLPCR
Trigger: TCGGCAAGGGAGTGAAATCCAAGACTCTCCAGATTT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGGAAGTGGTCATTGTTaGATTCTCCCATTGACTCGT +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCGSGHC*ILPLTR
Trigger: ACGAGTCAATGGGAGAATCCAACAATGACCACTTCC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGGAAGTGGTCATTGTTaGATTCTCCCATTGACTCGT +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSGSGHC*ILPLTR
Trigger: ACGAGTCAATGGGAGAATCCAACAATGACCACTTCC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGGAAGTGGTCATTGTTaGATTCTCCCATTGACTCGT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFGSGHC*ILPLTR
Trigger: ACGAGTCAATGGGAGAATCCAACAATGACCACTTCC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGGAAAGTGTTGGAAGTaGTCATTGTTGGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSGKCWK*SLLDSP
Trigger: GGGAGAATCCAACAATGACCACTTCCAACACTTTCC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTGGGTTGTTCACCTGCTaGATCTCAGATGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLGLFTC*ISDGFF
Trigger: AAAGAAACCATCTGAGATCCAGCAGGTGAACAACCC...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGGGTTGTTCACCTGCTaGATCTCAGATGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCGLFTC*ISDGFF
Trigger: AAAGAAACCATCTGAGATCCAGCAGGTGAACAACCC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTCTTCATCTCAAAGAATaGTGCCATTCCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLLHLKE*CHSIFH
Trigger: GTGGAAAATGGAATGGCACCATTCTTTGAGATGAAG...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCGTAGTGATCACTCTTTaGAGAGATCTGCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVVVITL*RDLLPI
Trigger: GATGGGAAGCAGATCTCTCCAAAGAGTGATCACTAC...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGTAGTGATCACTCTTTaGAGAGATCTGCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCVVITL*RDLLPI
Trigger: GATGGGAAGCAGATCTCTCCAAAGAGTGATCACTAC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAAATATCTGAGGTGGTaGCACTCCCAATACACGACA +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFKYLRW*HSQYTT
Trigger: TGTCGTGTATTGGGAGTGCCACCACCTCAGATATTT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTAAATATCTGAGGTGGTaGCACTCCCAATACACGACA +
Preference number: 4 (lower is better)
Translates to: NSKFLNDTWVFVLLVWFTKYLRW*HSQYTT
Trigger: TGTCGTGTATTGGGAGTGCCACCACCTCAGATATTT...AGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR CCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTATGTTGGTCAAGGCAATaGCTGTTTCAGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLCWSRQ*LFQCFS
Trigger: GCTGAAACACTGAAACAGCCATTGCCTTGACCAACA...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTGTTGGTCAAGGCAATaGCTGTTTCAGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVCWSRQ*LFQCFS
Trigger: GCTGAAACACTGAAACAGCCATTGCCTTGACCAACA...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTGTTGGTCAAGGCAATaGCTGTTTCAGTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCCWSRQ*LFQCFS
Trigger: GCTGAAACACTGAAACAGCCATTGCCTTGACCAACA...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACACCTTGGTCATTTGGGTaGTTTGGATGCTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTPWSFG*FGCFLW
Trigger: CCACAGAAAGCATCCAAACCACCCAAATGACCAAGG...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATAGTCGGATTTGGTTCTaGAGTTGCTGGAGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNSRIWF*SCWSFR
Trigger: TCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACT...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR TCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTGAGTGGGGTTTCCAGTaGCTCTACACTCCAGATAAA +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVEWGFQ*LYTPDK
Trigger: TTTATCTGGAGTGTAGAGTCACTGGAAACCCCACTC...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCACTGTCAGAATCTGTTaGACTGGCACCTTCAATGAA +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFTVRIC*TGTFNE
Trigger: TTCATTGAAGGTGCCAGTTCAACAGATTCTGACAGT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACCTCCAGCTCTTGATTTaGAAGCTAAACTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDLQLLI*KLNFHC
Trigger: ACAGTGAAAGTTTAGCTTTCAAATCAAGAGCTGGAG...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTGAAGTTGTTTTCTTTTaGGCTTGTGGCATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLEVVFF*ACGIAP
Trigger: TGGAGCTATGCCACAAGCTCAAAAGAAAACAACTTC...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTGTTGGATTCTCCCATTaGCTCGTAACTACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLVGFSH*LVTTVF
Trigger: GAAAACTGTAGTTACGAGTCAATGGGAGAATCCAAC...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTTCGTTCCAGGTCTTaGATAACAGCATCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCFRSRS*ITASFV
Trigger: CACAAAGGATGCTGTTATTCAAGACCTGGAACGAAA...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTATTTCGTTCCAGGTCTTaGATAACAGCATCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLFRSRS*ITASFV
Trigger: CACAAAGGATGCTGTTATTCAAGACCTGGAACGAAA...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCATTTCGTTCCAGGTCTTaGATAACAGCATCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSFRSRS*ITASFV
Trigger: CACAAAGGATGCTGTTATTCAAGACCTGGAACGAAA...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGATCCTCTTCTGGCTCCTaGATATTAAAGACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRSSSGS*ILKTVA
Trigger: TGCAACTGTCTTTAATATTCAGGAGCCAGAAGAGGA...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAACTGAACTTCATCACCTaGTTCATCCACAGGAGACCT +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQLNFIT*FIHRRP
Trigger: AGGTCTCCTGTGGATGAATCAGGTGATGAAGTTCAG...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCACTGAAGAATCGCTCCTaGATTGGTTCATTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSLKNRS*IGSFSS
Trigger: AGACGAAAATGAACCAATTCAGGAGCGATTCTTCAG...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTCTGAAGAATCGCTCCTaGATTGGTTCATTTTCGTCT +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCLKNRS*IGSFSS
Trigger: AGACGAAAATGAACCAATTCAGGAGCGATTCTTCAG...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTTCTTCCAAAATATCTaGGGTGGTGGCACTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVFFQNI*GGGTPN
Trigger: ATTGGGAGTGCCACCACCTCAGATATTTTGGAAGAA...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATTCTTCCAAAATATCTaGGGTGGTGGCACTCCCAAT +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTFFQNI*GGGTPN
Trigger: ATTGGGAGTGCCACCACCTCAGATATTTTGGAAGAA...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GCTAATAATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGGGTCAGTGCTGTGAGTaGGTGATTCATTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ANNSKFLNDTWVFVLLVWGQCCE*VIHFLS
Trigger: AGAAAGAAAATGAATCACTCACTCACAGCACTGACC...CCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATTATTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGGTCAGTGCTGTGAGTaGGTGATTCATTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCGQCCE*VIHFLS
Trigger: AGAAAGAAAATGAATCACTCACTCACAGCACTGACC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAGGTCAGTGCTGTGAGTaGGTGATTCATTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLGQCCE*VIHFLS
Trigger: AGAAAGAAAATGAATCACTCACTCACAGCACTGACC...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGGTCAGTGCTGTGAGTaGGTGATTCATTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFGQCCE*VIHFLS
Trigger: AGAAAGAAAATGAATCACTCACTCACAGCACTGACC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCCTCCTTCCAAACCCCTaGTTCCTCCAAATACTATAT +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESLLPNP*FLQILY
Trigger: ATATAGTATTTGGAGGAATCAGGGGTTTGGAAGGAG...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTACTCCTTCCAAACCCCTaGTTCCTCCAAATACTATAT +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLLLPNP*FLQILY
Trigger: ATATAGTATTTGGAGGAATCAGGGGTTTGGAAGGAG...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACTCAACTCAGTCTAGCTaGTGCAAAATCATATGCATT +
Preference number: 4 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHSTQSS*CKIICI
Trigger: AATGCATATGATTTTGCATCAGCTAGACTGAGTTGA...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGCGGTCAAAGAAACTTaGACCACACTGCATAGAACA +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVAVKET*TTLHRT
Trigger: TGTTCTATGCAGTGTGGTTCAAGTTTCTTTGACCGC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp AATAATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTCCTAAGGATGCTTaGGTAAGGAAGCCACAACTA +
Preference number: 4 (lower is better)
Translates to: NNSKFLNDTWVFVLLVWFTPKDA*VRKPQL
Trigger: TAGTTGTGGCTTCCTTACTCAAGCATCCTTAGGAGT...GAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR TCA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGGTGATCCTCATGCATTaGAATGTCACAGCAATTTTT +
Preference number: 4 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLVILMH*NVTAIF
Trigger: AAAAATTGCTGTGACATTTCAATGCATGAGGATCAC...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCATTTGAACGGTCTTCATaGACTCTGTGTCTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSFERSS*TLCLLS
Trigger: TGAAAGCAGACACAGAGTGCATGAAGACCGTTCAAA...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTATATCAGGAGTGTTGTaGAGTTCTTTCCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLISGVL*SSFPSQ
Trigger: CTGTGAAGGGAAAGAACTGCACAACACTCCTGATAT...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCATATCAGGAGTGTTGTaGAGTTCTTTCCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFISGVL*SSFPSQ
Trigger: CTGTGAAGGGAAAGAACTGCACAACACTCCTGATAT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR GCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCCACGGCTGTGTTTTaGAGTTCCTTTGTAAAAACA +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSATAVF*SSFVKT
Trigger: TGTTTTTACAAAGGAACTGCAAAACACAGCCGTGGC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR GCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAACATGTAAAGATCCCTaGATCTTCAGGGAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLTCKDP*IFRESL
Trigger: GAGACTTTCCCTGAAGATGCAGGGATCTTTACATGT...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAACATGTAAAGATCCCTaGATCTTCAGGGAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSTCKDP*IFRESL
Trigger: GAGACTTTCCCTGAAGATGCAGGGATCTTTACATGT...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR GCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTCATCTCAAAGAATGGTaGCATTCCATTTTCCACAGG +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCHLKEW*HSIFHR
Trigger: CCTGTGGAAAATGGAATGGCACCATTCTTTGAGATG...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR GCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTTGGGTGGTTTGGATaGTTTCTGTGGAATGAACTG +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCFGWFG*FLWNEL
Trigger: CAGTTCATTCCACAGAAAGCATCCAAACCACCCAAA...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACAAAACCTCAGACACACTaGAATCTCCACAGCATGTGT +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTKPQTH*NLHSMC
Trigger: ACACATGCTGTGGAGATTGCAGTGTGTCTGAGGTTT...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGAATGCGATCTCGTTTaGAGAATGCAACGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFECDLV*RMQRRK
Trigger: TTTTCTCCGTTGCATTCTGCAAACGAGATCGCATTC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR CCA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACTGGGCTTCTGTTTCTTaGCTTTGCGGCTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDWASVS*LCGFKY
Trigger: ATATTTAAAGCCGCAAAGCCAAGAAACAGAAGCCCA...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTCCTTCTGCTACTTCTTaGCTCCTCAGCTTTTGGATG +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVPSATS*LLSFWM
Trigger: CATCCAAAAGCTGAGGAGCCAAGAAGTAGCAGAAGG...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACAGGAAAGTGTTGGAAGTaGTCATTGTTGGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTGKCWK*SLLDSP
Trigger: GGGAGAATCCAACAATGACCACTTCCAACACTTTCC...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGGGTTGTTCACCTGCTaGATCTCAGATGGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVGLFTC*ISDGFF
Trigger: AAAGAAACCATCTGAGATCCAGCAGGTGAACAACCC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGTCTCTGTTCACAGCTaGAGACTTTGTATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFVSVHS*RLCIPD
Trigger: ATCAGGAATACAAAGTCTCCAGCTGTGAACAGAGAC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAGTCTCTGTTCACAGCTaGAGACTTTGTATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRVSVHS*RLCIPD
Trigger: ATCAGGAATACAAAGTCTCCAGCTGTGAACAGAGAC...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTACTTCATCTCAAAGAATaGTGCCATTCCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALLHLKE*CHSIFH
Trigger: GTGGAAAATGGAATGGCACCATTCTTTGAGATGAAG...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTAAACCAATAGATCTTTaGCTTTGGATTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAKPIDL*LWISSH
Trigger: GTGGCTGGAAATCCAAAGCCAAAGATCTATTGGTTT...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAGGACTTCGACCTCTTTaGTTGACAGCCTGTACCATT +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQGLRPL*LTACTI
Trigger: AATGGTACAGGCTGTCAACCAAAGAGGTCGAAGTCC...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCGAATCGCTCCTGAATTaGTTCATTTTCGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVESLLN*FIFVST
Trigger: AGTGGAGACGAAAATGAACCAATTCAGGAGCGATTC...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCGAATCGCTCCTGAATTaGTTCATTTTCGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESESLLN*FIFVST
Trigger: AGTGGAGACGAAAATGAACCAATTCAGGAGCGATTC...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTAGAATCGCTCCTGAATTaGTTCATTTTCGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLESLLN*FIFVST
Trigger: AGTGGAGACGAAAATGAACCAATTCAGGAGCGATTC...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACGCAACTCCTGTGTTTTaGAGCTTCTCAATAAACACA +
Preference number: 4 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNATPVF*SFSINT
Trigger: TGTGTTTATTGAGAAGCTCCAAAACACAGGAGTTGC...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAGCAACTCCTGTGTTTTaGAGCTTCTCAATAAACACA +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALATPVF*SFSINT
Trigger: TGTGTTTATTGAGAAGCTCCAAAACACAGGAGTTGC...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAACCAAAATATCTGAGGTaGTGGCACTCCCAATACACG +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQPKYLR*WHSQYT
Trigger: CGTGTATTGGGAGTGCCACCACCTCAGATATTTTGG...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAGGGTATTTGTTCTCCTaGTGTGGTTCACTATTAATG +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALGYLFS*CGSLLM
Trigger: CATTAATAGTGAACCACACCAGGAGAACAAATACCC...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTGACAAAGGAATATGTTaGTCAAGGCAATGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSADKGIC*SRQWLF
Trigger: AAACAGCCATTGCCTTGACCAACATATTCCTTTGTC...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTGTCTCTGTTCACAGCTaGAGACTTTGTATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAVSVHS*RLCIPF
Trigger: AAAAGGAATACAAAGTCTCCAGCTGTGAACAGAGAC...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505667.6
CDS-3UTR TCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAAATGCTTGGTCAGTTTaGAGACTCCAGAGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQNAWSV*RLQRGD
Trigger: ATCACCTCTCTGGAGTCTTCAAACTGACCAAGCATT...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCCTCCAGCTCTTGATTTaGAAGCTAAACTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFLQLLI*KLNFHC
Trigger: ACAGTGAAAGTTTAGCTTTCAAATCAAGAGCTGGAG...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCAATAATCATTTCTTGCTaGACATGTAAAGATCCCTGC +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTAIIISC*TCKDPC
Trigger: GCAGGGATCTTTACATGTTCAGCAAGAAATGATTAT...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR TCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGTTGGATTCTCCCATTaGCTCGTAACTACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVVGFSH*LVTTVF
Trigger: GAAAACTGTAGTTACGAGTCAATGGGAGAATCCAAC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAGGCACATCTCCATACTaGACTTCATCACCTGATTCA +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQGTSPY*TSSPDS
Trigger: TGAATCAGGTGATGAAGTTCAGTATGGAGATGTGCC...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAGCCTTTTACATAATGTaGCAAAGGAATATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALAFYIM*QRNMLV
Trigger: GACCAACATATTCCTTTGTCACATTATGTAAAAGGC...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCACTGTATCTGTCTaGATACACTGTGCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCFTVSV*IHCASE
Trigger: TTCTGAAGCACAGTGTATTCAGACAGATACAGTGAA...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCATATGAATTGAGTAACTaGGCTAAGAGAGGCCACTTA +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSYELSN*AKRGHL
Trigger: TAAGTGGCCTCTCTTAGCTCAGTTACTCAATTCATA...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGATGTTCACAGAGGCTTaGAGGAGAAGTACTGAAAAT +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLMFTEA*RRSTEN
Trigger: ATTTTCAGTACTTCTCCTGCAAGCCTCTGTGAACAT...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTACATGTAAAGATCCCTaGATCTTCAGGGAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVTCKDP*IFRESL
Trigger: GAGACTTTCCCTGAAGATGCAGGGATCTTTACATGT...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR GCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCCTCTTTGGAGAGATCTaGTTCCCATCTTTAAACCAA +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVLFGEI*FPSLNQ
Trigger: TTGGTTTAAAGATGGGAAGCAGATCTCTCCAAAGAG...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTATCCAAATACTATATATaGCTTGGTCATTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALSKYYI*LGHLGG
Trigger: ACCACCCAAATGACCAAGGCATATATAGTATTTGGA...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCATCCAAATACTATATATaGCTTGGTCATTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTASKYYI*LGHLGG
Trigger: ACCACCCAAATGACCAAGGCATATATAGTATTTGGA...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCATCATTTATGCCACCATaGAGTCTCAATCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTASFMPP*SLNPFS
Trigger: TGAAAATGGATTGAGACTGCATGGTGGCATAAATGA...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGCAATTTCTCATTTATaGCACCATGCAGTCTCAATC +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCAISHL*HHAVSI
Trigger: GATTGAGACTGCATGGTGGCATAAATGAGAAATTGC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGCAATTTCTCATTTATaGCACCATGCAGTCTCAATC +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFAISHL*HHAVSI
Trigger: GATTGAGACTGCATGGTGGCATAAATGAGAAATTGC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCCAGTCTTTACCGAGATaGCTTTACAAACCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFQSLPR*LYKPWN
Trigger: ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTG...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACAAATTTGGTCTCCTTATaGGAAGGATGTTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTNLVSL*EGCSQR
Trigger: CCTCTGTGAACATCCTTCCCATAAGGAGACCAAATT...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATAATTTGGTCTCCTTATaGGAAGGATGTTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNNLVSL*EGCSQR
Trigger: CCTCTGTGAACATCCTTCCCATAAGGAGACCAAATT...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTATGGGCTTCTGTTTCTTaGCTTTGCGGCTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLWASVS*LCGFKY
Trigger: ATATTTAAAGCCGCAAAGCCAAGAAACAGAAGCCCA...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCACAGGACAGCTGGTGTTaGAAGAGATTTATTACTGTT +
Preference number: 4 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPQDSWC*KRFITV
Trigger: AACAGTAATAAATCTCTTCCAACACCAGCTGTCCTG...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGACAGGACAGCTGGTGTTaGAAGAGATTTATTACTGTT +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRQDSWC*KRFITV
Trigger: AACAGTAATAAATCTCTTCCAACACCAGCTGTCCTG...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGTCTCTGTTCACAGCTaGAGACTTTGTATTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVVSVHS*RLCIPD
Trigger: ATCAGGAATACAAAGTCTCCAGCTGTGAACAGAGAC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCACTTCATCTCAAAGAATaGTGCCATTCCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSLHLKE*CHSIFH
Trigger: GTGGAAAATGGAATGGCACCATTCTTTGAGATGAAG...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGACTTCATCTCAAAGAATaGTGCCATTCCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRLHLKE*CHSIFH
Trigger: GTGGAAAATGGAATGGCACCATTCTTTGAGATGAAG...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTACATGTGAAAGTTACTaGCATTCCCTCAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSATCESY*HSLKDL
Trigger: AAGATCTTTGAGGGAATGCCAGTAACTTTCACATGT...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTAAACCAATAGATCTTTaGCTTTGGATTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLKPIDL*LWISSH
Trigger: GTGGCTGGAAATCCAAAGCCAAAGATCTATTGGTTT...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAAACCAATAGATCTTTaGCTTTGGATTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESKPIDL*LWISSH
Trigger: GTGGCTGGAAATCCAAAGCCAAAGATCTATTGGTTT...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAAAACCAATAGATCTTTaGCTTTGGATTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSKPIDL*LWISSH
Trigger: GTGGCTGGAAATCCAAAGCCAAAGATCTATTGGTTT...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAGTAGTGATCACTCTTTaGAGAGATCTGCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQVVITL*RDLLPI
Trigger: GATGGGAAGCAGATCTCTCCAAAGAGTGATCACTAC...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGAATCGCTCCTGAATTaGTTCATTTTCGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVESLLN*FIFVST
Trigger: AGTGGAGACGAAAATGAACCAATTCAGGAGCGATTC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTGCAACTCCTGTGTTTTaGAGCTTCTCAATAAACACA +
Preference number: 4 (lower is better)
Translates to: NSKFLNDTWVFVLLVWFTATPVF*SFSINT
Trigger: TGTGTTTATTGAGAAGCTCCAAAACACAGGAGTTGC...AGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGCAACTCCTGTGTTTTaGAGCTTCTCAATAAACACA +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFATPVF*SFSINT
Trigger: TGTGTTTATTGAGAAGCTCCAAAACACAGGAGTTGC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGCAACTCCTGTGTTTTaGAGCTTCTCAATAAACACA +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCATPVF*SFSINT
Trigger: TGTGTTTATTGAGAAGCTCCAAAACACAGGAGTTGC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGATTTGTTCTCCTGGTGTaGTTCACTATTAATGTCGAG +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRFVLLV*FTINVE
Trigger: CTCGACATTAATAGTGAACCACACCAGGAGAACAAA...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTTTTGTTCTCCTGGTGTaGTTCACTATTAATGTCGAG +
Preference number: 4 (lower is better)
Translates to: NSKFLNDTWVFVLLVWFTFVLLV*FTINVE
Trigger: CTCGACATTAATAGTGAACCACACCAGGAGAACAAA...AGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR CCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCTTTGTTCTCCTGGTGTaGTTCACTATTAATGTCGAG +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFFVLLV*FTINVE
Trigger: CTCGACATTAATAGTGAACCACACCAGGAGAACAAA...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTGGGTATTTGTTCTCCTaGTGTGGTTCACTATTAATG +
Preference number: 4 (lower is better)
Translates to: NSKFLNDTWVFVLLVWFTGYLFS*CGSLLM
Trigger: CATTAATAGTGAACCACACCAGGAGAACAAATACCC...AGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR CCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGACAAAGGAATATGTTaGTCAAGGCAATGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPDKGIC*SRQWLF
Trigger: AAACAGCCATTGCCTTGACCAACATATTCCTTTGTC...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGACAAAGGAATATGTTaGTCAAGGCAATGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCDKGIC*SRQWLF
Trigger: AAACAGCCATTGCCTTGACCAACATATTCCTTTGTC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACCACTTAAACCTTGGTTaGTTGGTGTTCTTACAAAGA +
Preference number: 4 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNHLNLG*LVFLQR
Trigger: TCTTTGTAAGAACACCAACCAACCAAGGTTTAAGTG...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR CAA 72 bp GTGCTCAAGCCTATTAATCACTTAAACCTTGGTTGGTaGGTGTTCTTACAAAGAAGTAGAAAGCTGTACATG +
Preference number: 4 (lower is better)
Translates to: VLKPINHLNLGW*VFLQRSRKLYM
Trigger: CATGTACAGCTTTCTACTTCTTTGTAAGAACACCAACCAACCAAGGTTTAAGTGATTAATAGGCTTGAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTACTGTCAGAATCTGTTaGACTGGCACCTTCAATGAA +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVTVRIC*TGTFNE
Trigger: TTCATTGAAGGTGCCAGTTCAACAGATTCTGACAGT...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR TCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTATAATCATTTCTTGCTaGACATGTAAAGATCCCTGC +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCIIISC*TCKDPC
Trigger: GCAGGGATCTTTACATGTTCAGCAAGAAATGATTAT...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR TCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGCCTTTTACATAATGTaGCAAAGGAATATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFAFYIM*QRNMLV
Trigger: GACCAACATATTCCTTTGTCACATTATGTAAAAGGC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR TCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAACTCCTTCCAAACCCCTaGTTCCTCCAAATACTATAT +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQLLPNP*FLQILY
Trigger: ATATAGTATTTGGAGGAATCAGGGGTTTGGAAGGAG...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATATGAATTGAGTAACTaGGCTAAGAGAGGCCACTTA +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTYELSN*AKRGHL
Trigger: TAAGTGGCCTCTCTTAGCTCAGTTACTCAATTCATA...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCATACTACGTATGAATTaGGTAACTGAGCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESILRMN*VTELRE
Trigger: CTCTCTTAGCTCAGTTACTCAATTCATACGTAGTAT...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTATACTACGTATGAATTaGGTAACTGAGCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLILRMN*VTELRE
Trigger: CTCTCTTAGCTCAGTTACTCAATTCATACGTAGTAT...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAATACTACGTATGAATTaGGTAACTGAGCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPILRMN*VTELRE
Trigger: CTCTCTTAGCTCAGTTACTCAATTCATACGTAGTAT...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTAAGTTCATCCAACAGTaGCAAGAGGCTCACATTTTG +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVKFIQQ*QEAHIL
Trigger: CAAAATGTGAGCCTCTTGTCACTGTTGGATGAACTT...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCCTGTGTTCTTTTCAATaGTTGGTCAGTTTGAAGACT +
Preference number: 4 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFLCSFQ*LVSLKT
Trigger: AGTCTTCAAACTGACCAAGCATTGAAAAGAACACAG...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATATGTTCACAGAGGCTTaGAGGAGAAGTACTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNMFTEA*RRSTEN
Trigger: ATTTTCAGTACTTCTCCTGCAAGCCTCTGTGAACAT...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTATATCAGGAGTGTTGTaGAGTTCTTTCCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVISGVL*SSFPSQ
Trigger: CTGTGAAGGGAAAGAACTGCACAACACTCCTGATAT...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTGCCACGGCTGTGTTTTaGAGTTCCTTTGTAAAAACA +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVATAVF*SSFVKT
Trigger: TGTTTTTACAAAGGAACTGCAAAACACAGCCGTGGC...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTCTCTTTGGAGAGATCTaGTTCCCATCTTTAAACCAA +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVLFGEI*FPSLNQ
Trigger: TTGGTTTAAAGATGGGAAGCAGATCTCTCCAAAGAG...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR GCA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCATTCATCCTTACATATTaGACTTGGTTCACTGTATCT +
Preference number: 4 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTAFILTY*TWFTVS
Trigger: AGATACAGTGAACCAAGTGCAATATGTAAGGATGAA...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAATTTGGGTGGTTTGGATaGTTTCTGTGGAATGAACTG +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQFGWFG*FLWNEL
Trigger: CAGTTCATTCCACAGAAAGCATCCAAACCACCCAAA...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCTCATTTATGCCACCATaGAGTCTCAATCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESSFMPP*SLNPFS
Trigger: TGAAAATGGATTGAGACTGCATGGTGGCATAAATGA...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACACAGTCTTTACCGAGATaGCTTTACAAACCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTQSLPR*LYKPWN
Trigger: ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTG...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAAGCAATGCATATAAGTaGGGTCAAAGAAACTTGAAC +
Preference number: 4 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRSNAYK*GQRNLN
Trigger: GTTCAAGTTTCTTTGACCGCACTTATATGCATTGCT...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTAGCAATGCATATAAGTaGGGTCAAAGAAACTTGAAC +
Preference number: 4 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCSNAYK*GQRNLN
Trigger: GTTCAAGTTTCTTTGACCGCACTTATATGCATTGCT...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTAAGCAATGCATATAAGTaGGGTCAAAGAAACTTGAAC +
Preference number: 4 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLSNAYK*GQRNLN
Trigger: GTTCAAGTTTCTTTGACCGCACTTATATGCATTGCT...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTACATGTGAAAGTTACTaGCATTCCCTCAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLTCESY*HSLKDL
Trigger: AAGATCTTTGAGGGAATGCCAGTAACTTTCACATGT...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCACATGTGAAAGTTACTaGCATTCCCTCAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVTCESY*HSLKDL
Trigger: AAGATCTTTGAGGGAATGCCAGTAACTTTCACATGT...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATGGGTATTTGTTCTCCTaGTGTGGTTCACTATTAATG +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNGYLFS*CGSLLM
Trigger: CATTAATAGTGAACCACACCAGGAGAACAAATACCC...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTATACTATATATGCCTTaGTCATTTGGGTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: TTPSLNISHYQATQHLYLILYMP*SFGWFG
Trigger: TCCAAACCACCCAAATGACCAAGGCATATATAGTAT...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAATACTATATATGCCTTaGTCATTTGGGTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLILYMP*SFGWFG
Trigger: TCCAAACCACCCAAATGACCAAGGCATATATAGTAT...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCCACTTAAACCTTGGTTaGTTGGTGTTCTTACAAAGA +
Preference number: 4 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESHLNLG*LVFLQR
Trigger: TCTTTGTAAGAACACCAACCAACCAAGGTTTAAGTG...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR CAA 72 bp ATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTaGCTCTACATACCTAAAATCTTCCACTACTACACA +
Preference number: 4 (lower is better)
Translates to: IYATMQSQSIFN*LYIPKIFHYYT
Trigger: TGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCTGTGTTCTTTTCAATaGTTGGTCAGTTTGAAGACT +
Preference number: 4 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNLCSFQ*LVSLKT
Trigger: AGTCTTCAAACTGACCAAGCATTGAAAAGAACACAG...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR GCA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTATGTTCACAGAGGCTTaGAGGAGAAGTACTGAAAAT +
Preference number: 4 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVMFTEA*RRSTEN
Trigger: ATTTTCAGTACTTCTCCTGCAAGCCTCTGTGAACAT...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR GCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGTGTCTGAATACACTGTaGTTCAGAATCATTGTAGTA +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLCLNTL*FRIIVV
Trigger: TACTACAATGATTCTGAAGCACAGTGTATTCAGACA...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGTTCATCCTTACATATTaGACTTGGTTCACTGTATCT +
Preference number: 4 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLFILTY*TWFTVS
Trigger: AGATACAGTGAACCAAGTGCAATATGTAAGGATGAA...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAATGGGCTTCTGTTTCTTaGCTTTGCGGCTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQWASVS*LCGFKY
Trigger: ATATTTAAAGCCGCAAAGCCAAGAAACAGAAGCCCA...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTACATGTGAAAGTTACTaGCATTCCCTCAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVTCESY*HSLKDL
Trigger: AAGATCTTTGAGGGAATGCCAGTAACTTTCACATGT...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACAATACTATATATGCCTTaGTCATTTGGGTGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTILYMP*SFGWFG
Trigger: TCCAAACCACCCAAATGACCAAGGCATATATAGTAT...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CCA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTCACTTAAACCTTGGTTaGTTGGTGTTCTTACAAAGA +
Preference number: 4 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVHLNLG*LVFLQR
Trigger: TCTTTGTAAGAACACCAACCAACCAAGGTTTAAGTG...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR TCA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAATCAACTCAGTCTAGCTaGTGCAAAATCATATGCATT +
Preference number: 4 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQSTQSS*CKIICI
Trigger: AATGCATATGATTTTGCATCAGCTAGACTGAGTTGA...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR GCA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATTCATCCTTACATATTaGACTTGGTTCACTGTATCT +
Preference number: 4 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTFILTY*TWFTVS
Trigger: AGATACAGTGAACCAAGTGCAATATGTAAGGATGAA...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
3UTR CAA 72 bp ACATTTCACACTATCAGGCTACACAGCACCTATATCTaGTGTTTAAAGGCACTTGTAGATAATACAAATTGT +
Preference number: 4 (lower is better)
Translates to: TFHTIRLHSTYI*CLKALVDNTNC
Trigger: ACAATTTGTATTATCTACAAGTGCCTTTAAACACAAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS GCA 90 bp GCGCCGAAGGGCTGCGCGAAGGGCGGCACGGGGGCGCGGCCGAACTaGCTCGGCGTCGGGGACATGGGCGACGGGAGGCTGGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: APKGCAKGGTGARPN*LGVGDMGDGRLDEL
Trigger: CAGCTCGTCCAGCCTCCCGTCGCCCATGTCCCCGACGCCGAGGCAGTTCGGCCGCGCCCCCGTGCCGCCCTTCGCGCAGCCCTTCGGCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507735.6
ENST00000649826.1
CDS CCA 90 bp TCGGCGTCGGGGACATGGGCGACGGGAGGCTGGACGAGCTGGGGCTaGAGGCCGGCGTGCCGTGGCCCGACGCGGGCCCGAGGTTCTGCG +
Preference number: 5 (lower is better)
Translates to: SASGTWATGGWTSWG*RPACRGPTRARGSA
Trigger: CGCAGAACCTCGGGCCCGCGTCGGGCCACGGCACGCCGGCCTCCAGCCCCAGCTCGTCCAGCCTCCCGTCGCCCATGTCCCCGACGCCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507735.6
ENST00000649826.1
CDS CCA 90 bp GGAGGCTGCCGAGCGCCGGCCTCCTGCTCCAGTCGGATTTGGTTCTaGAGTTGCTGGAGCTTCAGAGGGTCCCTCGGCTCTCCGGGCCGC +
Preference number: 5 (lower is better)
Translates to: GGCRAPASCSSRIWF*SCWSFRGSLGSPGR
Trigger: GCGGCCCGGAGAGCCGAGGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGCCGGCGCTCGGCAGCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS CCA 90 bp GCTGGCGGAGGCTGCCGAGCGCCGGCCTCCTGCTCCAGTCGGATTTaGTTCTGGAGTTGCTGGAGCTTCAGAGGGTCCCTCGGCTCTCCG +
Preference number: 5 (lower is better)
Translates to: AGGGCRAPASCSSRI*FWSCWSFRGSLGSP
Trigger: CGGAGAGCCGAGGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGCCGGCGCTCGGCAGCCTCCGCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS GCA 90 bp TTGGATTTCACTCCCTTGCCGAAACCACTGGACCTGCAGAGGGGGTaGCCCACGGACCCGGCACTCCAGAACCACCACCTGGCCTTCCGC +
Preference number: 5 (lower is better)
Translates to: LDFTPLPKPLDLQRG*PTDPALQNHHLAFR
Trigger: GCGGAAGGCCAGGTGGTGGTTCTGGAGTGCCGGGTCCGTGGGGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
CDS GCA 90 bp TCTGGAGAGTCTTGGATTTCACTCCCTTGCCGAAACCACTGGACCTaGAGAGGGGGTGCCCCACGGACCCGGCACTCCAGAACCACCACC +
Preference number: 5 (lower is better)
Translates to: SGESWISLPCRNHWT*RGGAPRTRHSRTTT
Trigger: GGTGGTGGTTCTGGAGTGCCGGGTCCGTGGGGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCAAGACTCTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
CDS CCA 90 bp GCTGGCGGAGGCTGCCGAGCGCCGGCCTCCTGCTCCAGTCGGATTTaGTTCTGGAGTTGCTGGAGCTTCAGAGGGTCCAGTTTTGGTTTG +
Preference number: 5 (lower is better)
Translates to: AGGGCRAPASCSSRI*FWSCWSFRGSSFGL
Trigger: CAAACCAAAACTGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGCCGGCGCTCGGCAGCCTCCGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649826.1
CDS CCA 90 bp CGGAAATCTGGAGAGTCTTGGATTTCACTCCCTTGCCGAAACCACTaGACCTGCAGAGGGGGTGCCCCACGGACCCGGCACTCCAGAACC +
Preference number: 5 (lower is better)
Translates to: RKSGESWISLPCRNH*TCRGGAPRTRHSRT
Trigger: GGTTCTGGAGTGCCGGGTCCGTGGGGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCAAGACTCTCCAGATTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
CDS CCA 90 bp GGAGGCTGCCGAGCGCCGGCCTCCTGCTCCAGTCGGATTTGGTTCTaGAGTTGCTGGAGCTTCAGAGGGTCCAGTTTTGGTTTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: GGCRAPASCSSRIWF*SCWSFRGSSFGLAS
Trigger: GCTTGCCAAACCAAAACTGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGCCGGCGCTCGGCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649826.1
CDS TCA 90 bp TCCATAGGGCTCTGGCTGGCTGAGGCACTCAGCAGGGCTGACGGCTaGTTTTTAGGAGACAGGTACCCACTGTCTGGTGACGAGGACTCC +
Preference number: 5 (lower is better)
Translates to: SIGLWLAEALSRADG*FLGDRYPLSGDEDS
Trigger: GGAGTCCTCGTCACCAGACAGTGGGTACCTGTCTCCTAAAAATCAGCCGTCAGCCCTGCTGAGTGCCTCAGCCAGCCAGAGCCCTATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS TCA 90 bp CACGCTTTTCAGCCTTTCGGAGGCTCCGGATGTAGCTGGGCCTGGTaGGCAGGGGTGACATGGCAGGTTTCCTCTTTGAAACAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: HAFQPFGGSGCSWAW*AGVTWQVSSLKQVK
Trigger: CTTCACCTGTTTCAAAGAGGAAACCTGCCATGTCACCCCTGCTCACCAGGCCCAGCTACATCCGGAGCCTCCGAAAGGCTGAAAAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS TCA 90 bp CTCCACGGCTGGGATGGACTCCGTTCGTTTCCCTCTCAGCAGCATTaGATTGCATTTGAAGGGCTGCCCTGCTCAGGCCTAACTCAGGGT +
Preference number: 5 (lower is better)
Translates to: LHGWDGLRSFPSQQH*IAFEGLPCSGLTQG
Trigger: ACCCTGAGTTAGGCCTGAGCAGGGCAGCCCTTCAAATGCAATTCAATGCTGCTGAGAGGGAAACGAACGGAGTCCATCCCAGCCGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
ENST00000649826.1
CDS TCA 90 bp TCCTGCTCGGTTGGTAGCTATACATGTGTAGATGCCGGCATCACGTaGCGTGACTGGCTCTATGATCAGAGAGTGCACCCCGTTCTCACG +
Preference number: 5 (lower is better)
Translates to: SCSVGSYTCVDAGIT*RDWLYDQRVHPVLT
Trigger: CGTGAGAACGGGGTGCACTCTCTGATCATAGAGCCAGTCACGTCACGTGATGCCGGCATCTACACATGTATAGCTACCAACCGAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261509.10
ENST00000503290.1
ENST00000505667.6
ENST00000507699.1
ENST00000507735.6
ENST00000512127.5
CDS CCA 90 bp TCTGCTGGAATGAAGAAAGAGAACTGGGAAGTGGTAAAGCTTGTCTaGGGACGAGGCGCAGATCGTGCAAGGAGAGAGGAGCAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: SAGMKKENWEVVKLV*GRGADRARREEQQA
Trigger: AGCCTGCTGCTCCTCTCTCCTTGCACGATCTGCGCCTCGTCCCCAGACAAGCTTTACCACTTCCCAGTTCTCTTTCTTCATTCCAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504519.5
CDS-3UTR CAA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCCCCTTCTGCTACTTCTaGGCTCCTCAGCTTTTGGAT +
Preference number: 5 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCPFCYF*APQLLD
Trigger: ATCCAAAAGCTGAGGAGCCAAGAAGTAGCAGAAGGG...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCAACTTGTCTCCAAGATaGGAGGGGGAGGTGGAAAGT +
Preference number: 5 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCNLSPR*EGEVES
Trigger: ACTTTCCACCTCCCCCTCCAATCTTGGAGACAAGTT...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTGCGGGGGTGACACCCTaGGGCAGCCCCAGGGCGTTG +
Preference number: 5 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLAGVTP*GSPRAL
Trigger: CAACGCCCTGGGGCTGCCCAAGGGTGTCACCCCCGC...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS TCA 90 bp GTTTGTTTCTCTGCCAGAGGCTGGACAGGTGTTGACCTGTTATCCTaGGGTCTCCTCGAGGCGTGTTCACCCAATTTGGTCTCCTTATGG +
Preference number: 5 (lower is better)
Translates to: VCFSARGWTGVDLLS*GLLEACSPNLVSLW
Trigger: CCATAAGGAGACCAAATTGGGTGAACACGCCTCGAGGAGACCTCAGGATAACAGGTCAACACCTGTCCAGCCTCTGGCAGAGAAACAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS GCA 90 bp GGGGTTTCCAGTGACTCTACACTCCAGATAAACTCGGCTCCCTTCTaGTACTTCTTGGCTCCTCAGCTTTTGGATGAATCGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: GVSSDSTLQINSAPF*YFLAPQLLDESRCS
Trigger: GCTGCACCTCGATTCATCCAAAAGCTGAGGAGCCAAGAAGTAGCAGAAGGGAGCCGAGTTTATCTGGAGTGTAGAGTCACTGGAAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS GCA 90 bp AAGGACTCATGGGAGGAGGTCCCTGACATATTTGAACGGTCTTCATaGACTCTGTGTCTGCTTTCAGTAGGAAGGCCAGAGGCACTGGAA +
Preference number: 5 (lower is better)
Translates to: KDSWEEVPDIFERSS*TLCLLSVGRPEALE
Trigger: TTCCAGTGCCTCTGGCCTTCCTACTGAAAGCAGACACAGAGTGCATGAAGACCGTTCAAATATGTCAGGGACCTCCTCCCATGAGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000511948.1
CDS CCA 90 bp TTGACCTGTTATCCTGAGGTCTCCTCGAGGCGTGTTCACCCAATTTaGTCTCCTTATGGGAAGGATGTTCACAGAGGCTTGCAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LTCYPEVSSRRVHPI*SPYGKDVHRGLQEK
Trigger: CTTCTCCTGCAAGCCTCTGTGAACATCCTTCCCATAAGGAGACCAAATTGGGTGAACACGCCTCGAGGAGACCTCAGGATAACAGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CCA 90 bp TTTTCTTTCCCAGCCGCTTGGAGACTGGGCACAAGTCTTGGCACTTaGCCTAGACAGCGATTAGATGTGTCCTTCTTGGACTCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: FSFPAAWRLGTSLGT*PRQRLDVSFLDSEV
Trigger: CACTTCAGAGTCCAAGAAGGACACATCTAATCGCTGTCTAGGCCAAGTGCCAAGACTTGTGCCCAGTCTCCAAGCGGCTGGGAAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511948.1
CDS-3UTR CAA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCTGTTGGAAGTGGTCATaGTTGGATTCTCCCATTGAC +
Preference number: 5 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCCWKWS*LDSPID
Trigger: GTCAATGGGAGAATCCAACAATGACCACTTCCAACA...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCCCCATCGAGATCTCTTaGAATGGTGTAGTGATCACT +
Preference number: 5 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCPIEIS*NGVVIT
Trigger: AGTGATCACTACACCATTCAAAGAGATCTCGATGGG...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCGGCACAAACCTGTTTTaGTCTCTCCTTATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCGTNLF*SLLMSP
Trigger: TGGAGACATAAGGAGAGACAAAAACAGGTTTGTGCC...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTCAAAAGGCCGGCCCCTaGCCTGCTGCGCTCGAGAGG +
Preference number: 5 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCQKAGP*PAALER
Trigger: CCTCTCGAGCGCAGCAGGCAAGGGGCCGGCCTTTTG...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS TCA 90 bp GGGTTTGTGTGCTTCTTTAGCAGCAACCACAAGCTCCAGGCTGAATaGGTTCTGTCCTGCTCGGTTGGTAGCTATACATGTGTAGATGCC +
Preference number: 5 (lower is better)
Translates to: GFVCFFSSNHKLQAE*VLSCSVGSYTCVDA
Trigger: GGCATCTACACATGTATAGCTACCAACCGAGCAGGACAGAACTCATTCAGCCTGGAGCTTGTGGTTGCTGCTAAAGAAGCACACAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261509.10
ENST00000503290.1
ENST00000505667.6
ENST00000507699.1
ENST00000507735.6
ENST00000512127.5
CDS GCA 90 bp CTTATTCCCAGCTTGCAACTTCTGGGCTCTGAATGCGATCTCGTTTaGAGAATGCAACGGAGAAAATTAACTGGCAGCCGCGCTGCCAAA +
Preference number: 5 (lower is better)
Translates to: LIPSLQLLGSECDLV*RMQRRKLTGSRAAK
Trigger: TTTGGCAGCGCGGCTGCCAGTTAATTTTCTCCGTTGCATTCTGCAAACGAGATCGCATTCAGAGCCCAGAAGTTGCAAGCTGGGAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS CCA 90 bp AGATCTCCTTTTCCGAGTCAAAATCTTCTGTTTCGGAGTCGGCTATaGCTCTCCGGGCCAGGTCAAGACTCTTGTTTATCTCTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: RSPFPSQNLLFRSRL*LSGPGQDSCLSLPG
Trigger: GCCAGGAAGAGATAAACAAGAGTCTTGACCTGGCCCGGAGAGCCATAGCCGACTCCGAAACAGAAGATTTTGACTCGGAAAAGGAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CCA 90 bp TATCTGAGGTGGTGGCACTCCCAATACACGACATTCCAGCCGCACTaGGTACCCATCAGCAACTCCTGTGTTTTGGAGCTTCTCAATAAA +
Preference number: 5 (lower is better)
Translates to: YLRWWHSQYTTFQPH*VPISNSCVLELLNK
Trigger: TTTATTGAGAAGCTCCAAAACACAGGAGTTGCTGATGGGTACCCAGTGCGGCTGGAATGTCGTGTATTGGGAGTGCCACCACCTCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261509.10
ENST00000503290.1
ENST00000505667.6
ENST00000507699.1
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGCTGGCCCCAGGGGACTaGACCTCTCTTTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLLAPGD*TSLSIS
Trigger: GGAGATGGAAAGAGAGGTCAAGTCCCCTGGGGCCAG...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAACCTCGGCTGGCCATaGTTCAGGAGGTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQNLGWP*FRRSSL
Trigger: CAAGGAGGACCTCCTGAACAATGGCCAGCCGAGGTT...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGTGGGTTGGCCTCAGGTaGGAACGCTGCTTTGATGTC +
Preference number: 5 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRWVGLR*ERCFDV
Trigger: GACATCAAAGCAGCGTTCCAACCTGAGGCCAACCCA...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCTGGCCCTGGGTTCCTaGACTTGTGAATGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRLALGS*TCEWQC
Trigger: ACACTGCCATTCACAAGTCAAGGAACCCAGGGCCAG...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS TCA 90 bp AGAGATACTCTTAGTTTGTTTCTCTGCCAGAGGCTGGACAGGTGTTaGCCTGTTATCCTGAGGTCTCCTCGAGGCGTGTTCACCCAATTT +
Preference number: 5 (lower is better)
Translates to: RDTLSLFLCQRLDRC*PVILRSPRGVFTQF
Trigger: AAATTGGGTGAACACGCCTCGAGGAGACCTCAGGATAACAGGTCAACACCTGTCCAGCCTCTGGCAGAGAAACAAACTAAGAGTATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS TCA 90 bp GTCCAGTTTTGGTTTGGCAAGCAGAGGTGGTGGCTCCTTAGTGGGTaGAAGCAGGACAGCTGGTGTTGGAAGAGATTTATTACTGTTAGC +
Preference number: 5 (lower is better)
Translates to: VQFWFGKQRWWLLSG*KQDSWCWKRFITVS
Trigger: GCTAACAGTAATAAATCTCTTCCAACACCAGCTGTCCTGCTTTCACCCACTAAGGAGCCACCACCTCTGCTTGCCAAACCAAAACTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649826.1
CDS-3UTR CAA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTAGGCCTAACTCAGGGTaGTTCACCTGCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGRPNSG*FTCWIS
Trigger: TGAGATCCAGCAGGTGAACAACCCTGAGTTAGGCCT...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCTTCTACTGGCCTTCTTaGGAAATCCTAGTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCFYWPS*EILVLV
Trigger: AACCAAAACTAGGATTTCCAAAGAAGGCCAGTAGAA...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCTTTTCGTTCCAGGTCTaGAATAACAGCATCCTTTGT +
Preference number: 5 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCFSFQV*NNSILC
Trigger: ACAAAGGATGCTGTTATTCAAGACCTGGAACGAAAA...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGGGGACTTCGACCTCTTaGGTTGACAGCCTGTACCAT +
Preference number: 5 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRGTSTS*VDSLYH
Trigger: ATGGTACAGGCTGTCAACCAAAGAGGTCGAAGTCCC...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGGCTGATGCCACTGGGTaGGGTATTTGTTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRADATG*GICSPG
Trigger: ACCAGGAGAACAAATACCCAACCCAGTGGCATCAGC...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAGGTTGGAACGCTGCTTaGATGTCTAGTCCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQGWNAA*MSSPWS
Trigger: GGACCAGGGACTAGACATCAAAGCAGCGTTCCAACC...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS CCA 90 bp TCTTGGGGGTCTTTCAGATCTCGCTTATTCCCAGCTTGCAACTTCTaGGCTCTGAATGCGATCTCGTTTGCAGAATGCAACGGAGAAAAT +
Preference number: 5 (lower is better)
Translates to: SWGSFRSRLFPACNF*ALNAISFAECNGEN
Trigger: ATTTTCTCCGTTGCATTCTGCAAACGAGATCGCATTCAGAGCCCAGAAGTTGCAAGCTGGGAATAAGCGAGATCTGAAAGACCCCCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR CAA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCACTGGCCCCAGGGGACTaGACCTCTCTTTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSLAPGD*TSLSIS
Trigger: GGAGATGGAAAGAGAGGTCAAGTCCCCTGGGGCCAG...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTACTGGCCCCAGGGGACTaGACCTCTCTTTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLLAPGD*TSLSIS
Trigger: GGAGATGGAAAGAGAGGTCAAGTCCCCTGGGGCCAG...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGAGGGACAGACAGTGGTaGAATCACAGCTGTGGTCAC +
Preference number: 5 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKRDRQW*NHSCGH
Trigger: GTGACCACAGCTGTGATTCAACCACTGTCTGTCCCT...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGTTGGATTTCACTCCCTaGCCGAAACCACTGGACCTG +
Preference number: 5 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKLDFTP*PKPLDL
Trigger: CAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCAA...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTAGCATCCTTTGTGCCTaGAATTTCCTCATCGGAGGC +
Preference number: 5 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGSILCA*NFLIGG
Trigger: GCCTCCGATGAGGAAATTCAAGGCACAAAGGATGCT...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGGCTGATGCCACTGGGTaGGGTATTTGTTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKADATG*GICSPG
Trigger: ACCAGGAGAACAAATACCCAACCCAGTGGCATCAGC...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CAAGGCAGTATTCAGTGTCAGGTGAGATGGGTTGGCCTCAGGTTGGAACGCTGCTTAAACCTTGGTTGGTaGGTGTTCTTACAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: QGSIQCQVRWVGLRLERCLNLGW*VFLQRS
Trigger: ACTTCTTTGTAAGAACACCAACCAACCAAGGTTTAA...GCAGCGTTCCAACCTGAGGCCAACCCATCTCACCTGACACTGAATACTGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAGATTTGGTTCTGGAGTaGCTGGAGCTTCAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQDLVLE*LELQRV
Trigger: GACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATC...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS TCA 90 bp GGTCTTTCAGATCTCGCTTATTCCCAGCTTGCAACTTCTGGGCTCTaGATGCGATCTCGTTTGCAGAATGCAACGGAGAAAATTAACTGG +
Preference number: 5 (lower is better)
Translates to: GLSDLAYSQLATSGL*MRSRLQNATEKINW
Trigger: CCAGTTAATTTTCTCCGTTGCATTCTGCAAACGAGATCGCATTCAGAGCCCAGAAGTTGCAAGCTGGGAATAAGCGAGATCTGAAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS CCA 90 bp AATGGAACGCTGATTTCCTTCTGTAGGGTAAAAGCTGATGCAGGGTaGTACATCTCTCCACATAGTACATGTGGCAAGCAGCTGCCATAT +
Preference number: 5 (lower is better)
Translates to: NGTLISFCRVKADAG*YISPHSTCGKQLPY
Trigger: ATATGGCAGCTGCTTGCCACATGTACTATGTGGAGAGATGTACCACCCTGCATCAGCTTTTACCCTACAGAAGGAAATCAGCGTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507699.1
CDS-3UTR CAA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGGCGTGTTCACCCAATTaGGTCTCCTTATGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKACSPN*VSLWEG
Trigger: TCCTTCCCATAAGGAGACCAAATTGGGTGAACACGC...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACGAGGCTGGACAGGTGTaGACCTGTTATCCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNEAGQV*TCYPEV
Trigger: GACCTCAGGATAACAGGTCAACACCTGTCCAGCCTC...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACGAGGCTGGACAGGTGTaGACCTGTTATCCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDEAGQV*TCYPEV
Trigger: GACCTCAGGATAACAGGTCAACACCTGTCCAGCCTC...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGTTGTGCTGGGAGTTTTaGCACCACGCTTTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKLCWEF*HHAFQP
Trigger: AGGCTGAAAAGCGTGGTGCAAAAACTCCCAGCACAA...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp GGCTGTTTCAGTGTTTCAGCTTTAACAAGAATGCTGGATTACAGGTCCTCACTTACGAGGACTCCCCATTaGGGCTTCTGTTTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: GCFSVSALTRMLDYRSSLTRTPH*GFCFLA
Trigger: AGCCAAGAAACAGAAGCCCAAATGGGGAGTCCTCGT...AAGTGAGGACCTGTAATCCAGCATTCTTGTTAAAGCTGAAACACTGAAACAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTCTTTCCATCTCCCCTaGGTCTTCCATAGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLSFHLP*VFHRAL
Trigger: CAGAGCCCTATGGAAGACCAAGGGGAGATGGAAAGA...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACACACCTCAGCAGATGTaGTGTCTGAGCCGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNTPQQM*CLSRWD
Trigger: ATCCCAGCGGCTCAGACACAACATCTGCTGAGGTGT...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTTGGATTTCACTCCCTaGCCGAAACCACTGGACCTG +
Preference number: 5 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLLDFTP*PKPLDL
Trigger: CAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCAA...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAATTCAGGAGGTCCTCCTaGAAGCGAAGTTTTCGTTCC +
Preference number: 5 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQFRRSS*KRSFRS
Trigger: GGAACGAAAACTTCGCTTCAAGGAGGACCTCCTGAA...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAAACCTCGGCTGGCCATaGTTCAGGAGGTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLNLGWP*FRRSSL
Trigger: CAAGGAGGACCTCCTGAACAATGGCCAGCCGAGGTT...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAACCTCGGCTGGCCATaGTTCAGGAGGTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFNLGWP*FRRSSL
Trigger: CAAGGAGGACCTCCTGAACAATGGCCAGCCGAGGTT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACGGGACTTCGACCTCTTaGGTTGACAGCCTGTACCAT +
Preference number: 5 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHGTSTS*VDSLYH
Trigger: ATGGTACAGGCTGTCAACCAAAGAGGTCGAAGTCCC...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTATGGGTTGGCCTCAGGTaGGAACGCTGCTTTGATGTC +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALWVGLR*ERCFDV
Trigger: GACATCAAAGCAGCGTTCCAACCTGAGGCCAACCCA...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTCTGGCCCTGGGTTCCTaGACTTGTGAATGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSALALGS*TCEWQC
Trigger: ACACTGCCATTCACAAGTCAAGGAACCCAGGGCCAG...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCACTGGCCCTGGGTTCCTaGACTTGTGAATGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTALALGS*TCEWQC
Trigger: ACACTGCCATTCACAAGTCAAGGAACCCAGGGCCAG...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGGAGGCTGGACAGGTGTaGACCTGTTATCCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLEAGQV*TCYPEV
Trigger: GACCTCAGGATAACAGGTCAACACCTGTCCAGCCTC...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACACGAGGACTCCCCATTaGGGCTTCTGTTTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDTRTPH*GFCFLA
Trigger: AGCCAAGAAACAGAAGCCCAAATGGGGAGTCCTCGT...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTATCTTTCCATCTCCCCTaGGTCTTCCATAGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALSFHLP*VFHRAL
Trigger: CAGAGCCCTATGGAAGACCAAGGGGAGATGGAAAGA...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGGCTCCTCAGCTTTaGGATGAATCGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNLAPQL*DESRCS
Trigger: GCTGCACCTCGATTCATCCAAAAGCTGAGGAGCCAA...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCATTGGCTCCTCAGCTTTaGGATGAATCGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTALAPQL*DESRCS
Trigger: GCTGCACCTCGATTCATCCAAAAGCTGAGGAGCCAA...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACTTGGCTCCTCAGCTTTaGGATGAATCGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDLAPQL*DESRCS
Trigger: GCTGCACCTCGATTCATCCAAAAGCTGAGGAGCCAA...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTTCCCTCACAGTGGATTaGAATATCAGGAGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGSLTVD*NIRSVV
Trigger: CACAACACTCCTGATATTCAAATCCACTGTGAGGGA...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTACACCTCAGCAGATGTaGTGTCTGAGCCGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLTPQQM*CLSRWD
Trigger: ATCCCAGCGGCTCAGACACAACATCTGCTGAGGTGT...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCACACCTCAGCAGATGTaGTGTCTGAGCCGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFTPQQM*CLSRWD
Trigger: ATCCCAGCGGCTCAGACACAACATCTGCTGAGGTGT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGTGTTTTCTTTTGAGCTaGTGGCATAGCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRCFLLS*WHSSSS
Trigger: AGAGCTGGAGCTATGCCACAAGCTCAAAAGAAAACA...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGTGGTCACCCCTGTCTTaGGAGATGATGATCCTATTG +
Preference number: 5 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKWSPLS*EMMILL
Trigger: CAATAGGATCATCATCTCCAAAGACAGGGGTGACCA...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGATGGACTGTGAACCTGTaGCACAGGGACAGACAGTGG +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRWTVNL*HRDRQW
Trigger: CCACTGTCTGTCCCTGTGCAACAGGTTCACAGTCCA...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCATGGACTGTGAACCTGTaGCACAGGGACAGACAGTGG +
Preference number: 5 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSWTVNL*HRDRQW
Trigger: CCACTGTCTGTCCCTGTGCAACAGGTTCACAGTCCA...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTACAGTTTTCAGTGTaGGCTGAGGTGACAACCAGC +
Preference number: 5 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHLQFSV*AEVTTS
Trigger: GCTGGTTGTCACCTCAGCCAACACTGAAAACTGTAG...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTCCAACTCCAAGGAACTaGTCTCCAAGATTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAPTPRN*SPRLEG
Trigger: CCCCTCCAATCTTGGAGACAAGTTCCTTGGAGTTGG...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAAGGCCTAACTCAGGGTaGTTCACCTGCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALRPNSG*FTCWIS
Trigger: TGAGATCCAGCAGGTGAACAACCCTGAGTTAGGCCT...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACAGCATTGAATTGCATTaGAAGGGCTGCCCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHSIELH*KGCPAQ
Trigger: CTGAGCAGGGCAGCCCTTCAAATGCAATTCAATGCT...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACTTCAGGAGGTCCTCCTaGAAGCGAAGTTTTCGTTCC +
Preference number: 5 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHFRRSS*KRSFRS
Trigger: GGAACGAAAACTTCGCTTCAAGGAGGACCTCCTGAA...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTGGGACTTCGACCTCTTaGGTTGACAGCCTGTACCAT +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAGTSTS*VDSLYH
Trigger: ATGGTACAGGCTGTCAACCAAAGAGGTCGAAGTCCC...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GAATGCTGGATTACAGGTCCTCACTTTCTACCAAGGCAGTATTCAGTGTCAGGTAGAATCGCTCCTGAATaGGTTCATTTTCGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: ECWITGPHFLPRQYSVSGRIAPE*VHFRLH
Trigger: GTGGAGACGAAAATGAACCAATTCAGGAGCGATTCT...ACCTGACACTGAATACTGCCTTGGTAGAAAGTGAGGACCTGTAATCCAGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACGGTAACCCACTGACTTaGCAGTCCATTCTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHGNPLT*QSILQS
Trigger: ACTCTGCAGAATGGACTGCAAAGTCAGTGGGTTACC...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCGGTTGGAACGCTGCTTaGATGTCTAGTCCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVGWNAA*MSSPWS
Trigger: GGACCAGGGACTAGACATCAAAGCAGCGTTCCAACC...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCATGGGTTGGCCTCAGGTaGGAACGCTGCTTTGATGTC +
Preference number: 5 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSWVGLR*ERCFDV
Trigger: GACATCAAAGCAGCGTTCCAACCTGAGGCCAACCCA...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTTGGGTTGGCCTCAGGTaGGAACGCTGCTTTGATGTC +
Preference number: 5 (lower is better)
Translates to: TTPSLNISHYQATQHLYLWVGLR*ERCFDV
Trigger: GACATCAAAGCAGCGTTCCAACCTGAGGCCAACCCA...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCAAGAAAAGCCTGGCCTTaGCTACCTCTCCTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTARKAWP*LPLLCL
Trigger: AAGGCACAGGAGAGGTAGCAAAGGCCAGGCTTTTCT...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTCTGCTCCAGTCGGATTaGGTTCTGGAGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TTPSLNISHYQATQHLYLLLQSD*VLELLE
Trigger: CTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAG...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS-3UTR CAA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTCACAGAACCATCAGTaGGGCGCAAAACGCCGTCTG +
Preference number: 5 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCSQNHQ*GAKRRL
Trigger: CAGACGGCGTTTTGCGCCCAACTGATGGTTCTGTGA...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS-3UTR CAA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACGCGTGTTCACCCAATTaGGTCTCCTTATGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDACSPN*VSLWEG
Trigger: TCCTTCCCATAAGGAGACCAAATTGGGTGAACACGC...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACTTGTGCTGGGAGTTTTaGCACCACGCTTTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDLCWEF*HHAFQP
Trigger: AGGCTGAAAAGCGTGGTGCAAAAACTCCCAGCACAA...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACAGGGGCCACCCTTTCTTaGATGTGGCGTTTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTGATLS*MWRFGL
Trigger: AAGCCCAAAACGCCACATCAAAGAAAGGGTGGCCCC...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATGGGGCCACCCTTTCTTaGATGTGGCGTTTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNGATLS*MWRFGL
Trigger: AAGCCCAAAACGCCACATCAAAGAAAGGGTGGCCCC...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGATTAAATTAGCTGCCTaGTCACACAGCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLIKLAA*SHSWLW
Trigger: CCAGAGCCAGCTGTGTGACAAGGCAGCTAATTTAAT...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACCCCTTCTGCTACTTCTaGGCTCCTCAGCTTTTGGAT +
Preference number: 5 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDPFCYF*APQLLD
Trigger: ATCCAAAAGCTGAGGAGCCAAGAAGTAGCAGAAGGG...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp GTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAATGTTTTCTTTTGAGCTaGTGGCATAGCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: VFTEMPLQTLESSTFLRQCFLLS*WHSSSS
Trigger: AGAGCTGGAGCTATGCCACAAGCTCAAAAGAAAACA...TTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGGGACAGACAGTGGTaGAATCACAGCTGTGGTCAC +
Preference number: 5 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFRDRQW*NHSCGH
Trigger: GTGACCACAGCTGTGATTCAACCACTGTCTGTCCCT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATGGACTGTGAACCTGTaGCACAGGGACAGACAGTGG +
Preference number: 5 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTWTVNL*HRDRQW
Trigger: CCACTGTCTGTCCCTGTGCAACAGGTTCACAGTCCA...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACGGCAGAGATATGAAGTaGGACTGTGAACCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHGRDMK*DCEPVA
Trigger: TGCAACAGGTTCACAGTCCAACTTCATATCTCTGCC...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCAGCTGGGCAGTGCTGGTaGCTGATCCATAATCATTTC +
Preference number: 5 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTAAGQCW*LIHNHF
Trigger: GAAATGATTATGGATCAGCAACCAGCACTGCCCAGC...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTGGGAGGTGGAAAGTGTaGGAAGTGGTCATTGTTGGA +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAGRWKV*EVVIVG
Trigger: TCCAACAATGACCACTTCCAACACTTTCCACCTCCC...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACAACTTGTCTCCAAGATaGGAGGGGGAGGTGGAAAGT +
Preference number: 5 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNNLSPR*EGEVES
Trigger: ACTTTCCACCTCCCCCTCCAATCTTGGAGACAAGTT...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTAACTTGTCTCCAAGATaGGAGGGGGAGGTGGAAAGT +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSANLSPR*EGEVES
Trigger: ACTTTCCACCTCCCCCTCCAATCTTGGAGACAAGTT...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCCCAACTCCAAGGAACTaGTCTCCAAGATTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESPTPRN*SPRLEG
Trigger: CCCCTCCAATCTTGGAGACAAGTTCCTTGGAGTTGG...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAAGCATCCTTTGTGCCTaGAATTTCCTCATCGGAGGC +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALSILCA*NFLIGG
Trigger: GCCTCCGATGAGGAAATTCAAGGCACAAAGGATGCT...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTCAGGAGGTCCTCCTaGAAGCGAAGTTTTCGTTCC +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAFRRSS*KRSFRS
Trigger: GGAACGAAAACTTCGCTTCAAGGAGGACCTCCTGAA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAAACCTCGGCTGGCCATaGTTCAGGAGGTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQNLGWP*FRRSSL
Trigger: CAAGGAGGACCTCCTGAACAATGGCCAGCCGAGGTT...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGAATAGATCTTTGGCTTaGGATTTCCAGCCACTCTAC +
Preference number: 5 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRNRSLA*DFQPLY
Trigger: GTAGAGTGGCTGGAAATCCAAAGCCAAAGATCTATT...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGAGCAACTCCTGTGTTTaGGAGCTTCTCAATAAACAC +
Preference number: 5 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRSNSCV*ELLNKH
Trigger: GTGTTTATTGAGAAGCTCCAAAACACAGGAGTTGCT...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGGTTGGAACGCTGCTTaGATGTCTAGTCCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVGWNAA*MSSPWS
Trigger: GGACCAGGGACTAGACATCAAAGCAGCGTTCCAACC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGAGAAAAGCCTGGCCTTaGCTACCTCTCCTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLRKAWP*LPLLCL
Trigger: AAGGCACAGGAGAGGTAGCAAAGGCCAGGCTTTTCT...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGACCAAACAAGCTCCTCTaGGGGGTCTTTCAGATCTCG +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRPNKLL*GVFQIS
Trigger: CGAGATCTGAAAGACCCCCAAGAGGAGCTTGTTTGG...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS CCA 90 bp CATGGTTTCACGTTTGGTGTTGCTGTCATCTGGACGTCTTCATTTTaGAGAATTCCTCATATTCTGAGGCTCAGTGAGAAACTGAACTCA +
Preference number: 5 (lower is better)
Translates to: HGFTFGVAVIWTSSF*RIPHILRLSEKLNS
Trigger: TGAGTTCAGTTTCTCACTGAGCCTCAGAATATGAGGAATTCTCCAAAATGAAGACGTCCAGATGACAGCAACACCAAACGTGAAACCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511948.1
CDS-3UTR CAA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGTGTTCTTTTCAATGCTaGGTCAGTTTGAAGACTCCA +
Preference number: 5 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRCSFQC*VSLKTP
Trigger: TGGAGTCTTCAAACTGACCAAGCATTGAAAAGAACA...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCGCGTGTTCACCCAATTaGGTCTCCTTATGGGAAGGA +
Preference number: 5 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVACSPN*VSLWEG
Trigger: TCCTTCCCATAAGGAGACCAAATTGGGTGAACACGC...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGTTGTGCTGGGAGTTTTaGCACCACGCTTTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLLCWEF*HHAFQP
Trigger: AGGCTGAAAAGCGTGGTGCAAAAACTCCCAGCACAA...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTGGGGCCACCCTTTCTTaGATGTGGCGTTTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVGATLS*MWRFGL
Trigger: AAGCCCAAAACGCCACATCAAAGAAAGGGTGGCCCC...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTCCCTCACAGTGGATTaGAATATCAGGAGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLSLTVD*NIRSVV
Trigger: CACAACACTCCTGATATTCAAATCCACTGTGAGGGA...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTACACCTCAGCAGATGTaGTGTCTGAGCCGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVTPQQM*CLSRWD
Trigger: ATCCCAGCGGCTCAGACACAACATCTGCTGAGGTGT...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp CTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGCAAAGAGAAGTTGTTTTCTTTaGAGCTTGTGGCATAGCTCC +
Preference number: 5 (lower is better)
Translates to: LYRDAFTNLGIQHLLKAKRSCFL*SLWHSS
Trigger: GGAGCTATGCCACAAGCTCAAAAGAAAACAACTTCT...CTTTGCCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACTGGTCACCCCTGTCTTaGGAGATGATGATCCTATTG +
Preference number: 5 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDWSPLS*EMMILL
Trigger: CAATAGGATCATCATCTCCAAAGACAGGGGTGACCA...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTGGTCACCCCTGTCTTaGGAGATGATGATCCTATTG +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAWSPLS*EMMILL
Trigger: CAATAGGATCATCATCTCCAAAGACAGGGGTGACCA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTAGGGACAGACAGTGGTaGAATCACAGCTGTGGTCAC +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVRDRQW*NHSCGH
Trigger: GTGACCACAGCTGTGATTCAACCACTGTCTGTCCCT...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTTGGACTGTGAACCTGTaGCACAGGGACAGACAGTGG +
Preference number: 5 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVWTVNL*HRDRQW
Trigger: CCACTGTCTGTCCCTGTGCAACAGGTTCACAGTCCA...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACGGCAGAGATATGAAGTaGGACTGTGAACCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDGRDMK*DCEPVA
Trigger: TGCAACAGGTTCACAGTCCAACTTCATATCTCTGCC...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTACGCCACGGCTGTGTTTaGCAGTTCCTTTGTAAAAAC +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALRHGCV*QFLCKN
Trigger: GTTTTTACAAAGGAACTGCAAAACACAGCCGTGGCG...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TGCTACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACCGCCACGGCTGTGTTTaGCAGTTCCTTTGTAAAAAC +
Preference number: 5 (lower is better)
Translates to: CYRQFLIYATMQSQSIFNRHGCV*QFLCKN
Trigger: GTTTTTACAAAGGAACTGCAAAACACAGCCGTGGCG...GTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACCGCCACGGCTGTGTTTaGCAGTTCCTTTGTAAAAAC +
Preference number: 5 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDRHGCV*QFLCKN
Trigger: GTTTTTACAAAGGAACTGCAAAACACAGCCGTGGCG...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATTGGATTTCACTCCCTaGCCGAAACCACTGGACCTG +
Preference number: 5 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTLDFTP*PKPLDL
Trigger: CAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCAA...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTTGGATTTCACTCCCTaGCCGAAACCACTGGACCTG +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVLDFTP*PKPLDL
Trigger: CAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCAA...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTGAAATCTGGAGAGTCTaGGATTTCACTCCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: TTPSLNISHYQATQHLYLEIWRV*DFTPLP
Trigger: CGGCAAGGGAGTGAAATCCAAGACTCTCCAGATTTC...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGAAATCTGGAGAGTCTaGGATTTCACTCCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCEIWRV*DFTPLP
Trigger: CGGCAAGGGAGTGAAATCCAAGACTCTCCAGATTTC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTACAGTTTTCAGTGTaGGCTGAGGTGACAACCAGC +
Preference number: 5 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLLQFSV*AEVTTS
Trigger: GCTGGTTGTCACCTCAGCCAACACTGAAAACTGTAG...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCACTACAGTTTTCAGTGTaGGCTGAGGTGACAACCAGC +
Preference number: 5 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSLQFSV*AEVTTS
Trigger: GCTGGTTGTCACCTCAGCCAACACTGAAAACTGTAG...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTATGGAAGTGGTCATTGTaGGATTCTCCCATTGACTCG +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALWKWSL*DSPIDS
Trigger: CGAGTCAATGGGAGAATCCAACAATGACCACTTCCA...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAGGGAGGTGGAAAGTGTaGGAAGTGGTCATTGTTGGA +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRGRWKV*EVVIVG
Trigger: TCCAACAATGACCACTTCCAACACTTTCCACCTCCC...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCGGGAGGTGGAAAGTGTaGGAAGTGGTCATTGTTGGA +
Preference number: 5 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFGRWKV*EVVIVG
Trigger: TCCAACAATGACCACTTCCAACACTTTCCACCTCCC...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTAGGCCTAACTCAGGGTaGTTCACCTGCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVRPNSG*FTCWIS
Trigger: TGAGATCCAGCAGGTGAACAACCCTGAGTTAGGCCT...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAAGCATTGAATTGCATTaGAAGGGCTGCCCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLSIELH*KGCPAQ
Trigger: CTGAGCAGGGCAGCCCTTCAAATGCAATTCAATGCT...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGCATTGAATTGCATTaGAAGGGCTGCCCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFSIELH*KGCPAQ
Trigger: CTGAGCAGGGCAGCCCTTCAAATGCAATTCAATGCT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGACTCAGCAGCATTGAATaGCATTTGAAGGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRLSSIE*HLKGCP
Trigger: AGGGCAGCCCTTCAAATGCAATTCAATGCTGCTGAG...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTAATCCTAGTTTTGGTTaGGCAAGCAGAGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLNPSFG*ASRGGG
Trigger: GCCACCACCTCTGCTTGCCAAACCAAAACTAGGATT...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAAATCCTAGTTTTGGTTaGGCAAGCAGAGGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRNPSFG*ASRGGG
Trigger: GCCACCACCTCTGCTTGCCAAACCAAAACTAGGATT...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACCTTCTTAAGGTTCTACTGGCCTTCTTaGGAAATCCTAGTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: AVFTEMPLQTLESSTFLRFYWPS*EILVLV
Trigger: AACCAAAACTAGGATTTCCAAAGAAGGCCAGTAGAA...CCTTAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTAGCATCCTTTGTGCCTaGAATTTCCTCATCGGAGGC +
Preference number: 5 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCSILCA*NFLIGG
Trigger: GCCTCCGATGAGGAAATTCAAGGCACAAAGGATGCT...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGGGACTTCGACCTCTTaGGTTGACAGCCTGTACCAT +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVGTSTS*VDSLYH
Trigger: ATGGTACAGGCTGTCAACCAAAGAGGTCGAAGTCCC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTGGTAACCCACTGACTTaGCAGTCCATTCTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: TTPSLNISHYQATQHLYLGNPLT*QSILQS
Trigger: ACTCTGCAGAATGGACTGCAAAGTCAGTGGGTTACC...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCGGTAACCCACTGACTTaGCAGTCCATTCTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVGNPLT*QSILQS
Trigger: ACTCTGCAGAATGGACTGCAAAGTCAGTGGGTTACC...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGGTAACCCACTGACTTaGCAGTCCATTCTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSGNPLT*QSILQS
Trigger: ACTCTGCAGAATGGACTGCAAAGTCAGTGGGTTACC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCACACTGGGTTGGGTATTaGTTCTCCTGGTGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPHWVGY*FSWCGS
Trigger: TGAACCACACCAGGAGAACAAATACCCAACCCAGTG...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTCACTGGGTTGGGTATTaGTTCTCCTGGTGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLHWVGY*FSWCGS
Trigger: TGAACCACACCAGGAGAACAAATACCCAACCCAGTG...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAGACTTTGTATTCCTTTaGACCATCCAGAGGACTCCC +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALDFVFL*TIQRTP
Trigger: GGGAGTCCTCTGGATGGTCAAAAGGAATACAAAGTC...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505667.6
CDS-3UTR CAA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCATCGCTTATTCCCAGCTaGCAACTTCTGGGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSSLIPS*QLLGSE
Trigger: TTCAGAGCCCAGAAGTTGCAAGCTGGGAATAAGCGA...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS TCA 90 bp GGCCTAATCCAGAGAGCCACCAATTGGTACAGCACAAATTTAAAGTaGGCAATAAGCGACAAGGAAGAAACCACACAGAAAAGATTTGTC +
Preference number: 5 (lower is better)
Translates to: GLIQRATNWYSTNLK*AISDKEETTQKRFV
Trigger: GACAAATCTTTTCTGTGTGGTTTCTTCCTTGTCGCTTATTGCTCACTTTAAATTTGTGCTGTACCAATTGGTGGCTCTCTGGATTAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511611.1
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAAGGTCCCTGACATATTaGAACGGTCTTCATGCACTC +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRRSLTY*NGLHAL
Trigger: GAGTGCATGAAGACCGTTCAAATATGTCAGGGACCT...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCATGGCAGGTTTCCTCTTaGAAACAGGTGAAGAGATAC +
Preference number: 5 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTAWQVSS*KQVKRY
Trigger: GTATCTCTTCACCTGTTTCAAAGAGGAAACCTGCCA...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTATTAAATTAGCTGCCTaGTCACACAGCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLIKLAA*SHSWLW
Trigger: CCAGAGCCAGCTGTGTGACAAGGCAGCTAATTTAAT...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCATTAAATTAGCTGCCTaGTCACACAGCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVIKLAA*SHSWLW
Trigger: CCAGAGCCAGCTGTGTGACAAGGCAGCTAATTTAAT...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTCCCTCACAGTGGATTaGAATATCAGGAGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSASLTVD*NIRSVV
Trigger: CACAACACTCCTGATATTCAAATCCACTGTGAGGGA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGGCTCCAGCTCTTGATTaGAAAGCTAAACTTTCACTG +
Preference number: 5 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLAPALD*KAKLSL
Trigger: CAGTGAAAGTTTAGCTTTCAAATCAAGAGCTGGAGC...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTGTTTTCTTTTGAGCTaGTGGCATAGCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSACFLLS*WHSSSS
Trigger: AGAGCTGGAGCTATGCCACAAGCTCAAAAGAAAACA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCTGGTCACCCCTGTCTTaGGAGATGATGATCCTATTG +
Preference number: 5 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESWSPLS*EMMILL
Trigger: CAATAGGATCATCATCTCCAAAGACAGGGGTGACCA...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTAGGGACAGACAGTGGTaGAATCACAGCTGTGGTCAC +
Preference number: 5 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVRDRQW*NHSCGH
Trigger: GTGACCACAGCTGTGATTCAACCACTGTCTGTCCCT...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTCGCCACGGCTGTGTTTaGCAGTTCCTTTGTAAAAAC +
Preference number: 5 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCRHGCV*QFLCKN
Trigger: GTTTTTACAAAGGAACTGCAAAACACAGCCGTGGCG...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATGAAATCTGGAGAGTCTaGGATTTCACTCCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNEIWRV*DFTPLP
Trigger: CGGCAAGGGAGTGAAATCCAAGACTCTCCAGATTTC...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGCTGGGCAGTGCTGGTaGCTGATCCATAATCATTTC +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVAGQCW*LIHNHF
Trigger: GAAATGATTATGGATCAGCAACCAGCACTGCCCAGC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCTGGAAGTGGTCATTGTaGGATTCTCCCATTGACTCG +
Preference number: 5 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFWKWSL*DSPIDS
Trigger: CGAGTCAATGGGAGAATCCAACAATGACCACTTCCA...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTGTTGGAAGTGGTCATaGTTGGATTCTCCCATTGAC +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSACWKWS*LDSPID
Trigger: GTCAATGGGAGAATCCAACAATGACCACTTCCAACA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTCTCAGCAGCATTGAATaGCATTTGAAGGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVLSSIE*HLKGCP
Trigger: AGGGCAGCCCTTCAAATGCAATTCAATGCTGCTGAG...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCTCAGCAGCATTGAATaGCATTTGAAGGGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNLSSIE*HLKGCP
Trigger: AGGGCAGCCCTTCAAATGCAATTCAATGCTGCTGAG...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TCATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATAGCATCCTTTGTGCCTaGAATTTCCTCATCGGAGGC +
Preference number: 5 (lower is better)
Translates to: SYAFKKQSLPRCLYKPWNSILCA*NFLIGG
Trigger: GCCTCCGATGAGGAAATTCAAGGCACAAAGGATGCT...ATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTGTAGTGATCACTCTTaGGAGAGATCTGCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSACSDHS*ERSASH
Trigger: ATGGGAAGCAGATCTCTCCAAAGAGTGATCACTACA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTACCCATCGAGATCTCTTaGAATGGTGTAGTGATCACT +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALPIEIS*NGVVIT
Trigger: AGTGATCACTACACCATTCAAAGAGATCTCGATGGG...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAAGAATCGCTCCTGAATaGGTTCATTTTCGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALRIAPE*VHFRLH
Trigger: GTGGAGACGAAAATGAACCAATTCAGGAGCGATTCT...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTATAAACACAGGGGGTTaGTGTGCTTCTTTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAINTGG*CASLAA
Trigger: TGCTGCTAAAGAAGCACACAAACCCCCTGTGTTTAT...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp CATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCAGCACAGCAACTCCTGTGTTTaGGAGCTTCTCAATAAACAC +
Preference number: 5 (lower is better)
Translates to: HSKSSLYRDAFTNLGIQHSNSCV*ELLNKH
Trigger: GTGTTTATTGAGAAGCTCCAAAACACAGGAGTTGCT...GTGCTGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGGTCATTTGGGTGGTTaGGATGCTTTCTGTGGAATG +
Preference number: 5 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSGHLGG*DAFCGM
Trigger: CATTCCACAGAAAGCATCCAAACCACCCAAATGACC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGGTCATTTGGGTGGTTaGGATGCTTTCTGTGGAATG +
Preference number: 5 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCGHLGG*DAFCGM
Trigger: CATTCCACAGAAAGCATCCAAACCACCCAAATGACC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCGGTCATTTGGGTGGTTaGGATGCTTTCTGTGGAATG +
Preference number: 5 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESGHLGG*DAFCGM
Trigger: CATTCCACAGAAAGCATCCAAACCACCCAAATGACC...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAGGCACAAACCTGTTTTaGTCTCTCCTTATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALGTNLF*SLLMSP
Trigger: TGGAGACATAAGGAGAGACAAAAACAGGTTTGTGCC...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS CCA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTaGTTCACTATTAATGTCGAGAAATGTAAACGTCCAGCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: NSKFLNDTWVFVLLV*FTINVEKCKRPAWQ
Trigger: CTGCCAGGCTGGACGTTTACATTTCTCGACATTAATAGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR CAA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACAAGGTCCCTGACATATTaGAACGGTCTTCATGCACTC +
Preference number: 5 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTRSLTY*NGLHAL
Trigger: GAGTGCATGAAGACCGTTCAAATATGTCAGGGACCT...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAACCCTTCTGCTACTTCTaGGCTCCTCAGCTTTTGGAT +
Preference number: 5 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQPFCYF*APQLLD
Trigger: ATCCAAAAGCTGAGGAGCCAAGAAGTAGCAGAAGGG...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp ATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTATCCCTCACAGTGGATTaGAATATCAGGAGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: IYRFRLKTIKSGQNQLSLSLTVD*NIRSVV
Trigger: CACAACACTCCTGATATTCAAATCCACTGTGAGGGA...TAGACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAGCTCCAGCTCTTGATTaGAAAGCTAAACTTTCACTG +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALAPALD*KAKLSL
Trigger: CAGTGAAAGTTTAGCTTTCAAATCAAGAGCTGGAGC...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTGGCAGAGATATGAAGTaGGACTGTGAACCTGTTGCA +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVGRDMK*DCEPVA
Trigger: TGCAACAGGTTCACAGTCCAACTTCATATCTCTGCC...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTGAAATCTGGAGAGTCTaGGATTTCACTCCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVEIWRV*DFTPLP
Trigger: CGGCAAGGGAGTGAAATCCAAGACTCTCCAGATTTC...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAGCTGGGCAGTGCTGGTaGCTGATCCATAATCATTTC +
Preference number: 5 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQAGQCW*LIHNHF
Trigger: GAAATGATTATGGATCAGCAACCAGCACTGCCCAGC...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTATGTTGGAAGTGGTCATaGTTGGATTCTCCCATTGAC +
Preference number: 5 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLCWKWS*LDSPID
Trigger: GTCAATGGGAGAATCCAACAATGACCACTTCCAACA...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGCAGGACAGCTGGTGTaGGAAGAGATTTATTACTGT +
Preference number: 5 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCAGQLV*EEIYYC
Trigger: ACAGTAATAAATCTCTTCCAACACCAGCTGTCCTGC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCAGGACAGCTGGTGTaGGAAGAGATTTATTACTGT +
Preference number: 5 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSAGQLV*EEIYYC
Trigger: ACAGTAATAAATCTCTTCCAACACCAGCTGTCCTGC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCTTGGAAATCCTAGTTTaGGTTTGGCAAGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFLEILV*VWQAEV
Trigger: CACCTCTGCTTGCCAAACCAAAACTAGGATTTCCAA...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCATTGGAAATCCTAGTTTaGGTTTGGCAAGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSLEILV*VWQAEV
Trigger: CACCTCTGCTTGCCAAACCAAAACTAGGATTTCCAA...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAAATAGATCTTTGGCTTaGGATTTCCAGCCACTCTAC +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALNRSLA*DFQPLY
Trigger: GTAGAGTGGCTGGAAATCCAAAGCCAAAGATCTATT...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCTGTAGTGATCACTCTTaGGAGAGATCTGCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESCSDHS*ERSASH
Trigger: ATGGGAAGCAGATCTCTCCAAAGAGTGATCACTACA...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCCCCATCGAGATCTCTTaGAATGGTGTAGTGATCACT +
Preference number: 5 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFPIEIS*NGVVIT
Trigger: AGTGATCACTACACCATTCAAAGAGATCTCGATGGG...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCAGAATCGCTCCTGAATaGGTTCATTTTCGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVRIAPE*VHFRLH
Trigger: GTGGAGACGAAAATGAACCAATTCAGGAGCGATTCT...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAAGAATCGCTCCTGAATaGGTTCATTTTCGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRRIAPE*VHFRLH
Trigger: GTGGAGACGAAAATGAACCAATTCAGGAGCGATTCT...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTATAAACACAGGGGGTTaGTGTGCTTCTTTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCINTGG*CASLAA
Trigger: TGCTGCTAAAGAAGCACACAAACCCCCTGTGTTTAT...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTATAAACACAGGGGGTTaGTGTGCTTCTTTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: NSKFLNDTWVFVLLVWFTINTGG*CASLAA
Trigger: TGCTGCTAAAGAAGCACACAAACCCCCTGTGTTTAT...AGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR CAA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTATATGCCTTGGTCATTaGGGTGGTTTGGATGCTTTC +
Preference number: 5 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLICLGH*GGLDAF
Trigger: GAAAGCATCCAAACCACCCAAATGACCAAGGCATAT...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCATATGCCTTGGTCATTaGGGTGGTTTGGATGCTTTC +
Preference number: 5 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESICLGH*GGLDAF
Trigger: GAAAGCATCCAAACCACCCAAATGACCAAGGCATAT...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAATATGCCTTGGTCATTaGGGTGGTTTGGATGCTTTC +
Preference number: 5 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSICLGH*GGLDAF
Trigger: GAAAGCATCCAAACCACCCAAATGACCAAGGCATAT...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS CCA 90 bp GATCTTTGGCTTTGGATTTCCAGCCACTCTACATGTGAAAGTTACTaGCATTCCCTCAAAGATCTTGTAATGTTTCAGCTTCATCTCAAA +
Preference number: 5 (lower is better)
Translates to: DLWLWISSHSTCESY*HSLKDLVMFQLHLK
Trigger: TTTGAGATGAAGCTGAAACATTACAAGATCTTTGAGGGAATGCCAGTAACTTTCACATGTAGAGTGGCTGGAAATCCAAAGCCAAAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261509.10
ENST00000393726.7
ENST00000505667.6
ENST00000507325.5
ENST00000507699.1
ENST00000507735.6
ENST00000511682.1
ENST00000512127.5
ENST00000513187.5
CDS-3UTR CAA 90 bp CATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTCCAGCTCTTGATTaGAAAGCTAAACTTTCACTG +
Preference number: 5 (lower is better)
Translates to: HNVTKEYVGQGNGCFSVSAPALD*KAKLSL
Trigger: CAGTGAAAGTTTAGCTTTCAAATCAAGAGCTGGAGC...TGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCGCTCCAGCTCTTGATTaGAAAGCTAAACTTTCACTG +
Preference number: 5 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESAPALD*KAKLSL
Trigger: CAGTGAAAGTTTAGCTTTCAAATCAAGAGCTGGAGC...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGAAGTTGTTTTCTTTaGAGCTTGTGGCATAGCTCC +
Preference number: 5 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFRSCFL*SLWHSS
Trigger: GGAGCTATGCCACAAGCTCAAAAGAAAACAACTTCT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTATGGTTCTGACGAGATGATGATCCTATaGTCAAGGAAACAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: RGSHFVERKKHHSLYGSDEMMIL*SRKQKL
Trigger: CAACTTCTGTTTCCTTGACAATAGGATCATCATCTC...GTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTGTTGGATTCTCCCATaGACTCGTAACTACAGTTTT +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSACWILP*TRNYSF
Trigger: AAAACTGTAGTTACGAGTCAATGGGAGAATCCAACA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTATGTTGGATTCTCCCATaGACTCGTAACTACAGTTTT +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALCWILP*TRNYSF
Trigger: AAAACTGTAGTTACGAGTCAATGGGAGAATCCAACA...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATTGGAAATCCTAGTTTaGGTTTGGCAAGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTLEILV*VWQAEV
Trigger: CACCTCTGCTTGCCAAACCAAAACTAGGATTTCCAA...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAAATAGATCTTTGGCTTaGGATTTCCAGCCACTCTAC +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRNRSLA*DFQPLY
Trigger: GTAGAGTGGCTGGAAATCCAAAGCCAAAGATCTATT...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTATAAACACAGGGGGTTaGTGTGCTTCTTTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVINTGG*CASLAA
Trigger: TGCTGCTAAAGAAGCACACAAACCCCCTGTGTTTAT...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCACTAGCAACTCCTGTGTTTaGGAGCTTCTCAATAAACAC +
Preference number: 5 (lower is better)
Translates to: NSKFLNDTWVFVLLVWFTSNSCV*ELLNKH
Trigger: GTGTTTATTGAGAAGCTCCAAAACACAGGAGTTGCT...AGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR CAA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGAGCAACTCCTGTGTTTaGGAGCTTCTCAATAAACAC +
Preference number: 5 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLSNSCV*ELLNKH
Trigger: GTGTTTATTGAGAAGCTCCAAAACACAGGAGTTGCT...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAAGCAACTCCTGTGTTTaGGAGCTTCTCAATAAACAC +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRSNSCV*ELLNKH
Trigger: GTGTTTATTGAGAAGCTCCAAAACACAGGAGTTGCT...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCACACAGCACCTATATCTaGTGTTTAAAGGCACTTGTA +
Preference number: 5 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTAHSTYI*CLKALV
Trigger: TACAAGTGCCTTTAAACACAAGATATAGGTGCTGTG...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp AATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACAGGCACAAACCTGTTTTaGTCTCTCCTTATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: NFSFMPPCSLNPFSTCSTGTNLF*SLLMSP
Trigger: TGGAGACATAAGGAGAGACAAAAACAGGTTTGTGCC...TGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCATGCCTTTACAAACCTaGGAATCCAGCACCTTCTTA +
Preference number: 5 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESMPLQT*ESSTFL
Trigger: TAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCAT...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCATGCCTTTACAAACCTaGGAATCCAGCACCTTCTTA +
Preference number: 5 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFMPLQT*ESSTFL
Trigger: TAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCAT...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGATGCCTTTACAAACCTaGGAATCCAGCACCTTCTTA +
Preference number: 5 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLMPLQT*ESSTFL
Trigger: TAAGAAGGTGCTGGATTCCAAGGTTTGTAAAGGCAT...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTATCACTTAAACCTTGGTaGGTTGGTGTTCTTACAAAG +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALSLKPW*VGVLTK
Trigger: CTTTGTAAGAACACCAACCAACCAAGGTTTAAGTGA...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TTGCTCTACATACCTAAAATCTTCCACTACTACACAAACCTCAGACACACTGCATCACTTAAACCTTGGTaGGTTGGTGTTCTTACAAAG +
Preference number: 5 (lower is better)
Translates to: LLYIPKIFHYYTNLRHTASLKPW*VGVLTK
Trigger: CTTTGTAAGAACACCAACCAACCAAGGTTTAAGTGA...TGCAGTGTGTCTGAGGTTTGTGTAGTAGTGGAAGATTTTAGGTATGTAGAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp CCAACAGTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTTGTCCTACAAGCTTCCTTaGTGTGTTTCAAAGTTGATT +
Preference number: 5 (lower is better)
Translates to: PTVTRGSHFVERKKHHSLSYKLP*CVSKLI
Trigger: AATCAACTTTGAAACACACAAAGGAAGCTTGTAGGA...CAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCACTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTGTTCTTTTCAATGCTaGGTCAGTTTGAAGACTCCA +
Preference number: 5 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVCSFQC*VSLKTP
Trigger: TGGAGTCTTCAAACTGACCAAGCATTGAAAAGAACA...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTAAGAAGTCAGTATTCTaGCTTTCTTCCTGCATGTCT +
Preference number: 5 (lower is better)
Translates to: TTPSLNISHYQATQHLYLKKSVF*LSSCMS
Trigger: AGACATGCAGGAAGAAAGCAAGAATACTGACTTCTT...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTTGGCAGGTTTCCTCTTaGAAACAGGTGAAGAGATAC +
Preference number: 5 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVWQVSS*KQVKRY
Trigger: GTATCTCTTCACCTGTTTCAAAGAGGAAACCTGCCA...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTTGTTTTCTTTTGAGCTaGTGGCATAGCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVCFLLS*WHSSSS
Trigger: AGAGCTGGAGCTATGCCACAAGCTCAAAAGAAAACA...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTAGAAGTTGTTTTCTTTaGAGCTTGTGGCATAGCTCC +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVRSCFL*SLWHSS
Trigger: GGAGCTATGCCACAAGCTCAAAAGAAAACAACTTCT...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGAGAGATGATGATCCTATaGTCAAGGAAACAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTREMMIL*SRKQKL
Trigger: CAACTTCTGTTTCCTTGACAATAGGATCATCATCTC...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp ACAACTCCCTCATTAAACATTTCACACTATCAGGCTACACAGCACCTATATCTTGAGATGATGATCCTATaGTCAAGGAAACAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: TTPSLNISHYQATQHLYLEMMIL*SRKQKL
Trigger: CAACTTCTGTTTCCTTGACAATAGGATCATCATCTC...AAGATATAGGTGCTGTGTAGCCTGATAGTGTGAAATGTTTAATGAGGGAGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS-3UTR CAA 90 bp TTCTGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTGAGATGATGATCCTATaGTCAAGGAAACAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: FCLLHNVTKEYVGQGNGCEMMIL*SRKQKL
Trigger: CAACTTCTGTTTCCTTGACAATAGGATCATCATCTC...ACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGATGTTGGATTCTCCCATaGACTCGTAACTACAGTTTT +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRCWILP*TRNYSF
Trigger: AAAACTGTAGTTACGAGTCAATGGGAGAATCCAACA...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGATTCTACTGGCCTTCTTaGGAAATCCTAGTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRFYWPS*EILVLV
Trigger: AACCAAAACTAGGATTTCCAAAGAAGGCCAGTAGAA...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS-3UTR CAA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGTTTTCGTTCCAGGTCTaGAATAACAGCATCCTTTGT +
Preference number: 5 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLFSFQV*NNSILC
Trigger: ACAAAGGATGCTGTTATTCAAGACCTGGAACGAAAA...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp AAATTTATCGGTTCCGACTTAAAACCATCAAGTCTGGTCAGAATCAACTCAGTCTTTTCGTTCCAGGTCTaGAATAACAGCATCCTTTGT +
Preference number: 5 (lower is better)
Translates to: KFIGSDLKPSSLVRINSVFSFQV*NNSILC
Trigger: ACAAAGGATGCTGTTATTCAAGACCTGGAACGAAAA...GACTGAGTTGATTCTGACCAGACTTGATGGTTTTAAGTCGGAACCGATAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTAATAGATCTTTGGCTTaGGATTTCCAGCCACTCTAC +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVNRSLA*DFQPLY
Trigger: GTAGAGTGGCTGGAAATCCAAAGCCAAAGATCTATT...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAATGTAGTGATCACTCTTaGGAGAGATCTGCTTCCCAT +
Preference number: 5 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQCSDHS*ERSASH
Trigger: ATGGGAAGCAGATCTCTCCAAAGAGTGATCACTACA...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp ATATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCCACAGCACCTATATCTaGTGTTTAAAGGCACTTGTA +
Preference number: 5 (lower is better)
Translates to: ICIQKAVFTEMPLQTLESHSTYI*CLKALV
Trigger: TACAAGTGCCTTTAAACACAAGATATAGGTGCTGTG...GGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TCATCCTTACATATTGCACTTGGTTCACTGTATCTGTCTGAATACACTGTGCTTCACAGCACCTATATCTaGTGTTTAAAGGCACTTGTA +
Preference number: 5 (lower is better)
Translates to: SSLHIALGSLYLSEYTVLHSTYI*CLKALV
Trigger: TACAAGTGCCTTTAAACACAAGATATAGGTGCTGTG...AAGCACAGTGTATTCAGACAGATACAGTGAACCAAGTGCAATATGTAAGGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTTCATCCTTACATATaGCACTTGGTTCACTGTATC +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSAFHPYI*HLVHCI
Trigger: GATACAGTGAACCAAGTGCAATATGTAAGGATGAAA...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp AATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTAGACAAGGCATTTACTaGGATTTCTTTGTCATCTCT +
Preference number: 5 (lower is better)
Translates to: NVTKEYVGQGNGCFSVSARQGIY*DFFVIS
Trigger: AGAGATGACAAAGAAATCCAAGTAAATGCCTTGTCT...AGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TACAGGCAATTTCTCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGAATACTATATATGCCTaGGTCATTTGGGTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: YRQFLIYATMQSQSIFNLNTIYA*VIWVVW
Trigger: CCAAACCACCCAAATGACCAAGGCATATATAGTATT...CAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGAGAAATTGCCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAAATACTATATATGCCTaGGTCATTTGGGTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLNTIYA*VIWVVW
Trigger: CCAAACCACCCAAATGACCAAGGCATATATAGTATT...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp GTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTATTAAACCTTGGTTGGTaGGTGTTCTTACAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: VTKEYVGQGNGCFSVSALLNLGW*VFLQRS
Trigger: ACTTCTTTGTAAGAACACCAACCAACCAAGGTTTAA...TAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp AATAATTCAAAGTTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTGGTTCATGATACTTGGGTATTaGTTCTCCTGGTGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: NNSKFLNDTWVFVLLVWFMILGY*FSWCGS
Trigger: TGAACCACACCAGGAGAACAAATACCCAAGTATCAT...GAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAACTTTGAATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS-3UTR CAA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTAGAAGTTGTTTTCTTTaGAGCTTGTGGCATAGCTCC +
Preference number: 5 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVRSCFL*SLWHSS
Trigger: GGAGCTATGCCACAAGCTCAAAAGAAAACAACTTCT...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTTTTCGTTCCAGGTCTaGAATAACAGCATCCTTTGT +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVFSFQV*NNSILC
Trigger: ACAAAGGATGCTGTTATTCAAGACCTGGAACGAAAA...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
ENST00000512127.5
CDS-3UTR CAA 90 bp AAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTTCAGCTTTAACAAGATTTCATCCTTACATATaGCACTTGGTTCACTGTATC +
Preference number: 5 (lower is better)
Translates to: KEYVGQGNGCFSVSALTRFHPYI*HLVHCI
Trigger: GATACAGTGAACCAAGTGCAATATGTAAGGATGAAA...TCTTGTTAAAGCTGAAACACTGAAACAGCCATTGCCTTGACCAACATATTCCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TGCCTTTTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCTTTCATCCTTACATATaGCACTTGGTTCACTGTATC +
Preference number: 5 (lower is better)
Translates to: CLLHNVTKEYVGQGNGCFFHPYI*HLVHCI
Trigger: GATACAGTGAACCAAGTGCAATATGTAAGGATGAAA...GAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAAAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TCATTTATGCCACCATGCAGTCTCAATCCATTTTCAACTTGCTCTACATACCTAAGACAAGGCATTTACTaGGATTTCTTTGTCATCTCT +
Preference number: 5 (lower is better)
Translates to: SFMPPCSLNPFSTCSTYLRQGIY*DFFVIS
Trigger: AGAGATGACAAAGAAATCCAAGTAAATGCCTTGTCT...TAGGTATGTAGAGCAAGTTGAAAATGGATTGAGACTGCATGGTGGCATAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TTACATAATGTGACAAAGGAATATGTTGGTCAAGGCAATGGCTGTTTCAGTGTTAATACTATATATGCCTaGGTCATTTGGGTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: LHNVTKEYVGQGNGCFSVNTIYA*VIWVVW
Trigger: CCAAACCACCCAAATGACCAAGGCATATATAGTATT...AACACTGAAACAGCCATTGCCTTGACCAACATATTCCTTTGTCACATTATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp TATGCATTCAAAAAGCAGTCTTTACCGAGATGCCTTTACAAACCTTGGAATCCATTAAACCTTGGTTGGTaGGTGTTCTTACAAAGAAGT +
Preference number: 5 (lower is better)
Translates to: YAFKKQSLPRCLYKPWNPLNLGW*VFLQRS
Trigger: ACTTCTTTGTAAGAACACCAACCAACCAAGGTTTAA...TGGATTCCAAGGTTTGTAAAGGCATCTCGGTAAAGACTGCTTTTTGAATGCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAATCACTTAAACCTTGGTaGGTTGGTGTTCTTACAAAG +
Preference number: 5 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQSLKPW*VGVLTK
Trigger: CTTTGTAAGAACACCAACCAACCAAGGTTTAAGTGA...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp GACTGTGTATGGTATCTTAAATTCCATATTAGCAATGCATATAAGTGCGGTCAAAGACAAGGCATTTACTaGGATTTCTTTGTCATCTCT +
Preference number: 5 (lower is better)
Translates to: DCVWYLKFHISNAYKCGQRQGIY*DFFVIS
Trigger: AGAGATGACAAAGAAATCCAAGTAAATGCCTTGTCT...TTGACCGCACTTATATGCATTGCTAATATGGAATTTAAGATACCATACACAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507735.6
CDS-3UTR CAA 90 bp GAATTCTCAGTAAGACCAATTTTCCTACAAGCTTCCTTTGTGTGTTTCAAAGTTAGTGATCCTCATGCATaGAAATGTCACAGCAATTTT +
Preference number: 5 (lower is better)
Translates to: EFSVRPIFLQASFVCFKVSDPHA*KCHSNF
Trigger: AAAATTGCTGTGACATTTCAATGCATGAGGATCACT...AACTTTGAAACACACAAAGGAAGCTTGTAGGAAAATTGGTCTTACTGAGAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508898.5
CDS GCA 72 bp GGCTGCGCGAAGGGCGGCACGGGGGCGCGGCCGAACTaGCTCGGCGTCGGGGACATGGGCGACGGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GCAKGGTGARPN*LGVGDMGDGRL
Trigger: CAGCCTCCCGTCGCCCATGTCCCCGACGCCGAGGCAGTTCGGCCGCGCCCCCGTGCCGCCCTTCGCGCAGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507735.6
ENST00000649826.1
CDS CCA 72 bp GGAAGGCCGCGGGCGTCTGGCTGTGGCCGAAGCGGGTaGCAGGCGACGAGCAGTGGGACGCCTGTCCCGGGC +
Preference number: 6 (lower is better)
Translates to: GRPRASGCGRSG*QATSSGTPVPG
Trigger: GCCCGGGACAGGCGTCCCACTGCTCGTCGCCTGCCACCCGCTTCGGCCACAGCCAGACGCCCGCGGCCTTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507735.6
ENST00000649826.1
CDS CCA 72 bp TGGCTGTGGCCGAAGCGGGTGGCAGGCGACGAGCAGTaGGACGCCTGTCCCGGGCTCGGGAGCGGCGGTGGT +
Preference number: 6 (lower is better)
Translates to: WLWPKRVAGDEQ*DACPGLGSGGG
Trigger: ACCACCGCCGCTCCCGAGCCCGGGACAGGCGTCCCACTGCTCGTCGCCTGCCACCCGCTTCGGCCACAGCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507735.6
ENST00000649826.1
CDS CAA 90 bp TTTGGAAATCCTGCGGGGGTGACACCCTTGGGCAGCCCCAGGGCGTaGACGGCCGCCGGCGGCGGCTGCGAGGGCAGCAGAGCGCTGAGG +
Preference number: 6 (lower is better)
Translates to: FGNPAGVTPLGSPRA*TAAGGGCEGSRALR
Trigger: CCTCAGCGCTCTGCTGCCCTCGCAGCCGCCGCCGGCGGCCGTCAACGCCCTGGGGCTGCCCAAGGGTGTCACCCCCGCAGGATTTCCAAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507735.6
ENST00000649826.1
CDS CCA 72 bp AGCAGAGCGCTGAGGAAGGCCGCGGGCGTCTGGCTGTaGCCGAAGCGGGTGGCAGGCGACGAGCAGTGGGAC +
Preference number: 6 (lower is better)
Translates to: SRALRKAAGVWL*PKRVAGDEQWD
Trigger: GTCCCACTGCTCGTCGCCTGCCACCCGCTTCGGCCACAGCCAGACGCCCGCGGCCTTCCTCAGCGCTCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507735.6
ENST00000649826.1
CDS CAA 72 bp CTGGCCTTCTTTGGAAATCCTGCGGGGGTGACACCCTaGGGCAGCCCCAGGGCGTTGACGGCCGCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: LAFFGNPAGVTP*GSPRALTAAGG
Trigger: GCCGCCGGCGGCCGTCAACGCCCTGGGGCTGCCCAAGGGTGTCACCCCCGCAGGATTTCCAAAGAAGGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507735.6
ENST00000649826.1
CDS CAA 90 bp CTGCCGAGCGCCGGCCTCCTGCTCCAGTCGGATTTGGTTCTGGAGTaGCTGGAGCTTCAGAGGGTCCCTCGGCTCTCCGGGCCGCCTCCC +
Preference number: 6 (lower is better)
Translates to: LPSAGLLLQSDLVLE*LELQRVPRLSGPPP
Trigger: GGGAGGCGGCCCGGAGAGCCGAGGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGCCGGCGCTCGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS TCA 72 bp GGGGCAGGTATCGGGCTTTATACCTCGCCCGCCGGGTaGCTCAGGAGGCTCCGAGCCTTCACCCGCCGCCCT +
Preference number: 6 (lower is better)
Translates to: GAGIGLYTSPAG*LRRLRAFTRRP
Trigger: AGGGCGGCGGGTGAAGGCTCGGAGCCTCCTGAGTCACCCGGCGGGCGAGGTATAAAGCCCGATACCTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393726.7
CDS CAA 90 bp GGCTGGCGGAGGCTGCCGAGCGCCGGCCTCCTGCTCCAGTCGGATTaGGTTCTGGAGTTGCTGGAGCTTCAGAGGGTCCCTCGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: GWRRLPSAGLLLQSD*VLELLELQRVPRLS
Trigger: GGAGAGCCGAGGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGCCGGCGCTCGGCAGCCTCCGCCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS GCA 72 bp ACTCCCTTGCCGAAACCACTGGACCTGCAGAGGGGGTaGCCCACGGACCCGGCACTCCAGAACCACCACCTG +
Preference number: 6 (lower is better)
Translates to: TPLPKPLDLQRG*PTDPALQNHHL
Trigger: CAGGTGGTGGTTCTGGAGTGCCGGGTCCGTGGGGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
CDS GCA 72 bp CCGGCCTCCTGCTCCAGTCGGATTTGGTTCTGGAGTTaGTGGAGCTTCAGAGGGTCCCTCGGCTCTCCGGGC +
Preference number: 6 (lower is better)
Translates to: PASCSSRIWFWS*WSFRGSLGSPG
Trigger: GCCCGGAGAGCCGAGGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS CCA 72 bp GCCTCCTGCTCCAGTCGGATTTGGTTCTGGAGTTGCTaGAGCTTCAGAGGGTCCCTCGGCTCTCCGGGCCGC +
Preference number: 6 (lower is better)
Translates to: ASCSSRIWFWSC*SFRGSLGSPGR
Trigger: GCGGCCCGGAGAGCCGAGGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS CAA 72 bp GCCGGCCTCCTGCTCCAGTCGGATTTGGTTCTGGAGTaGCTGGAGCTTCAGAGGGTCCCTCGGCTCTCCGGG +
Preference number: 6 (lower is better)
Translates to: AGLLLQSDLVLE*LELQRVPRLSG
Trigger: CCCGGAGAGCCGAGGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGCCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS CCA 72 bp GGTGCCCCACGGACCCGGCACTCCAGAACCACCACCTaGCCTTCCGCCACGGCTGTGTTTTGCAGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: GAPRTRHSRTTT*PSATAVFCSSF
Trigger: AAAGGAACTGCAAAACACAGCCGTGGCGGAAGGCCAGGTGGTGGTTCTGGAGTGCCGGGTCCGTGGGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261509.10
ENST00000503457.1
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
CDS CCA 72 bp GGAGAGTCTTGGATTTCACTCCCTTGCCGAAACCACTaGACCTGCAGAGGGGGTGCCCCACGGACCCGGCAC +
Preference number: 6 (lower is better)
Translates to: GESWISLPCRNH*TCRGGAPRTRH
Trigger: GTGCCGGGTCCGTGGGGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCAAGACTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
CDS CCA 72 bp CGAGCGCCGGCCTCCTGCTCCAGTCGGATTTGGTTCTaGAGTTGCTGGAGCTTCAGAGGGTCCCTCGGCTCT +
Preference number: 6 (lower is better)
Translates to: RAPASCSSRIWF*SCWSFRGSLGS
Trigger: AGAGCCGAGGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGCCGGCGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507735.6
CDS CAA 90 bp GGCTGGCGGAGGCTGCCGAGCGCCGGCCTCCTGCTCCAGTCGGATTaGGTTCTGGAGTTGCTGGAGCTTCAGAGGGTCCAGTTTTGGTTT +
Preference number: 6 (lower is better)
Translates to: GWRRLPSAGLLLQSD*VLELLELQRVQFWF
Trigger: AAACCAAAACTGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGCCGGCGCTCGGCAGCCTCCGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649826.1
CDS GCA 72 bp TCTTGGATTTCACTCCCTTGCCGAAACCACTGGACCTaGAGAGGGGGTGCCCCACGGACCCGGCACTCCAGA +
Preference number: 6 (lower is better)
Translates to: SWISLPCRNHWT*RGGAPRTRHSR
Trigger: TCTGGAGTGCCGGGTCCGTGGGGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
CDS GCA 72 bp GTGGGGCTGTGGGTGAGACTTGCGGTTGTGTGGCACTaGCAAGTCCTGGTTGTCCTGGTAGCAATGCCTGGC +
Preference number: 6 (lower is better)
Translates to: VGLWVRLAVVWH*QVLVVLVAMPG
Trigger: GCCAGGCATTGCTACCAGGACAACCAGGACTTGGCAGTGCCACACAACCGCAAGTCTCACCCACAGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CCA 72 bp GGCGCTGTGGGGCTGTGGGTGAGACTTGCGGTTGTGTaGCACTGCCAAGTCCTGGTTGTCCTGGTAGCAATG +
Preference number: 6 (lower is better)
Translates to: GAVGLWVRLAVV*HCQVLVVLVAM
Trigger: CATTGCTACCAGGACAACCAGGACTTGGCAGTGCCACACAACCGCAAGTCTCACCCACAGCCCCACAGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CCA 72 bp CGAGCGCCGGCCTCCTGCTCCAGTCGGATTTGGTTCTaGAGTTGCTGGAGCTTCAGAGGGTCCAGTTTTGGT +
Preference number: 6 (lower is better)
Translates to: RAPASCSSRIWF*SCWSFRGSSFG
Trigger: ACCAAAACTGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGCCGGCGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649826.1
CDS TCA 72 bp CAGCCTTTCGGAGGCTCCGGATGTAGCTGGGCCTGGTaGGCAGGGGTGACATGGCAGGTTTCCTCTTTGAAA +
Preference number: 6 (lower is better)
Translates to: QPFGGSGCSWAW*AGVTWQVSSLK
Trigger: TTTCAAAGAGGAAACCTGCCATGTCACCCCTGCTCACCAGGCCCAGCTACATCCGGAGCCTCCGAAAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS TCA 72 bp CTCTGGCTGGCTGAGGCACTCAGCAGGGCTGACGGCTaGTTTTTAGGAGACAGGTACCCACTGTCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: LWLAEALSRADG*FLGDRYPLSGD
Trigger: GTCACCAGACAGTGGGTACCTGTCTCCTAAAAATCAGCCGTCAGCCCTGCTGAGTGCCTCAGCCAGCCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CAA 90 bp CAGATAAACTCGGCTCCCTTCTGCTACTTCTTGGCTCCTCAGCTTTaGGATGAATCGAGGTGCAGCTGGGAAGTGGAGGGCGCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: QINSAPFCYFLAPQL*DESRCSWEVEGAVG
Trigger: CCCCACAGCGCCCTCCACTTCCCAGCTGCACCTCGATTCATCCAAAAGCTGAGGAGCCAAGAAGTAGCAGAAGGGAGCCGAGTTTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CCA 72 bp GGATGGCCTGAGGGAGACCGGGGACTTCGACCTCTTTaGTTGACAGCCTGTACCATTAGCCGTCCAGTACAA +
Preference number: 6 (lower is better)
Translates to: GWPEGDRGLRPL*LTACTISRPVQ
Trigger: TTGTACTGGACGGCTAATGGTACAGGCTGTCAACCAAAGAGGTCGAAGTCCCCGGTCTCCCTCAGGCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507699.1
ENST00000507735.6
ENST00000512127.5
ENST00000513187.5
CDS CCA 72 bp AACGCCGTCTGCCCCCACTCCCAAACAAGCTCCTCTTaGGGGTCTTTCAGATCTCGCTTATTCCCAGCTTGC +
Preference number: 6 (lower is better)
Translates to: NAVCPHSQTSSS*GSFRSRLFPAC
Trigger: GCAAGCTGGGAATAAGCGAGATCTGAAAGACCCCCAAGAGGAGCTTGTTTGGGAGTGGGGGCAGACGGCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS CAA 72 bp TGGCCTGAGGGAGACCGGGGACTTCGACCTCTTTGGTaGACAGCCTGTACCATTAGCCGTCCAGTACAACTG +
Preference number: 6 (lower is better)
Translates to: WPEGDRGLRPLW*TACTISRPVQL
Trigger: CAGTTGTACTGGACGGCTAATGGTACAGGCTGTCAACCAAAGAGGTCGAAGTCCCCGGTCTCCCTCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507699.1
ENST00000507735.6
ENST00000512127.5
ENST00000513187.5
CDS TCA 72 bp TCTGCCAGAGGCTGGACAGGTGTTGACCTGTTATCCTaGGGTCTCCTCGAGGCGTGTTCACCCAATTTGGTC +
Preference number: 6 (lower is better)
Translates to: SARGWTGVDLLS*GLLEACSPNLV
Trigger: GACCAAATTGGGTGAACACGCCTCGAGGAGACCTCAGGATAACAGGTCAACACCTGTCCAGCCTCTGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS GCA 72 bp ATTCGGAAATCTGGAGAGTCTTGGATTTCACTCCCTTaGCGAAACCACTGGACCTGCAGAGGGGGTGCCCCA +
Preference number: 6 (lower is better)
Translates to: IRKSGESWISLP*RNHWTCRGGAP
Trigger: TGGGGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCAAGACTCTCCAGATTTCCGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
CDS CCA 72 bp CCAGCCGCTTGGAGACTGGGCACAAGTCTTGGCACTTaGCCTAGACAGCGATTAGATGTGTCCTTCTTGGAC +
Preference number: 6 (lower is better)
Translates to: PAAWRLGTSLGT*PRQRLDVSFLD
Trigger: GTCCAAGAAGGACACATCTAATCGCTGTCTAGGCCAAGTGCCAAGACTTGTGCCCAGTCTCCAAGCGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511948.1
CDS CCA 72 bp GCCTCCTGCTCCAGTCGGATTTGGTTCTGGAGTTGCTaGAGCTTCAGAGGGTCCAGTTTTGGTTTGGCAAGC +
Preference number: 6 (lower is better)
Translates to: ASCSSRIWFWSC*SFRGSSFGLAS
Trigger: GCTTGCCAAACCAAAACTGGACCCTCTGAAGCTCCAGCAACTCCAGAACCAAATCCGACTGGAGCAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649826.1
CDS CAA 72 bp CTTGTCACACAGCTGGCTCTGGGGGCCACCCTTTCTTaGATGTGGCGTTTTGGGCTTTACGTTTGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: LVTQLALGATLS*MWRFGLYVCAG
Trigger: CCCAGCACAAACGTAAAGCCCAAAACGCCACATCAAAGAAAGGGTGGCCCCCAGAGCCAGCTGTGTGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CAA 72 bp AATTCGGAAATCTGGAGAGTCTTGGATTTCACTCCCTaGCCGAAACCACTGGACCTGCAGAGGGGGTGCCCC +
Preference number: 6 (lower is better)
Translates to: NSEIWRVLDFTP*PKPLDLQRGCP
Trigger: GGGGCACCCCCTCTGCAGGTCCAGTGGTTTCGGCAAGGGAGTGAAATCCAAGACTCTCCAGATTTCCGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
CDS CAA 72 bp AAACGCCGTCTGCCCCCACTCCCAAACAAGCTCCTCTaGGGGGTCTTTCAGATCTCGCTTATTCCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: KRRLPPLPNKLL*GVFQISLIPSL
Trigger: CAAGCTGGGAATAAGCGAGATCTGAAAGACCCCCAAGAGGAGCTTGTTTGGGAGTGGGGGCAGACGGCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS TCA 72 bp TTGTCACACAGCTGGCTCTGGGGGCCACCCTTTCTTTaGTGTGGCGTTTTGGGCTTTACGTTTGTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: LSHSWLWGPPFL*CGVLGFTFVLG
Trigger: TCCCAGCACAAACGTAAAGCCCAAAACGCCACATCAAAGAAAGGGTGGCCCCCAGAGCCAGCTGTGTGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS TCA 72 bp GGCACCTTCAATGAACACCTCAGCAGATGTTGTGTCTaGGCCGCTGGGATTCGTAGCCAAACAGGTGTAGCG +
Preference number: 6 (lower is better)
Translates to: GTFNEHLSRCCV*AAGIRSQTGVA
Trigger: CGCTACACCTGTTTGGCTACGAATCCCAGCGGCTCAGACACAACATCTGCTGAGGTGTTCATTGAAGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261509.10
ENST00000503457.1
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
ENST00000513245.5
CDS TCA 72 bp CCGTTCGTTTCCCTCTCAGCAGCATTGAATTGCATTTaGAGGGCTGCCCTGCTCAGGCCTAACTCAGGGTTG +
Preference number: 6 (lower is better)
Translates to: PFVSLSAALNCI*RAALLRPNSGL
Trigger: CAACCCTGAGTTAGGCCTGAGCAGGGCAGCCCTTCAAATGCAATTCAATGCTGCTGAGAGGGAAACGAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
ENST00000649826.1
CDS TCA 72 bp TGGGATGGACTCCGTTCGTTTCCCTCTCAGCAGCATTaGATTGCATTTGAAGGGCTGCCCTGCTCAGGCCTA +
Preference number: 6 (lower is better)
Translates to: WDGLRSFPSQQH*IAFEGLPCSGL
Trigger: TAGGCCTGAGCAGGGCAGCCCTTCAAATGCAATTCAATGCTGCTGAGAGGGAAACGAACGGAGTCCATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
ENST00000649826.1
CDS CCA 72 bp TGGTGGCACTCCCAATACACGACATTCCAGCCGCACTaGGTACCCATCAGCAACTCCTGTGTTTTGGAGCTT +
Preference number: 6 (lower is better)
Translates to: WWHSQYTTFQPH*VPISNSCVLEL
Trigger: AAGCTCCAAAACACAGGAGTTGCTGATGGGTACCCAGTGCGGCTGGAATGTCGTGTATTGGGAGTGCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261509.10
ENST00000503290.1
ENST00000505667.6
ENST00000507699.1
ENST00000507735.6
ENST00000512127.5
CDS TCA 72 bp CTTAGTTTGTTTCTCTGCCAGAGGCTGGACAGGTGTTaGCCTGTTATCCTGAGGTCTCCTCGAGGCGTGTTC +
Preference number: 6 (lower is better)
Translates to: LSLFLCQRLDRC*PVILRSPRGVF
Trigger: GAACACGCCTCGAGGAGACCTCAGGATAACAGGTCAACACCTGTCCAGCCTCTGGCAGAGAAACAAACTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS TCA 72 bp CGGCTGATTTTTAGGAGACAGGTACCCACTGTCTGGTaGCGAGGACTCCCCATTTGGGCTTCTGTTTCTTGG +
Preference number: 6 (lower is better)
Translates to: RLIFRRQVPTVW*RGLPIWASVSW
Trigger: CCAAGAAACAGAAGCCCAAATGGGGAGTCCTCGTCACCAGACAGTGGGTACCTGTCTCCTAAAAATCAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS TCA 72 bp GTTGGTAGCTATACATGTGTAGATGCCGGCATCACGTaGCGTGACTGGCTCTATGATCAGAGAGTGCACCCC +
Preference number: 6 (lower is better)
Translates to: VGSYTCVDAGIT*RDWLYDQRVHP
Trigger: GGGGTGCACTCTCTGATCATAGAGCCAGTCACGTCACGTGATGCCGGCATCTACACATGTATAGCTACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261509.10
ENST00000503290.1
ENST00000505667.6
ENST00000507699.1
ENST00000507735.6
ENST00000512127.5
CDS CCA 72 bp ACACAGCTGGCTCTGGGGGCCACCCTTTCTTTGATGTaGCGTTTTGGGCTTTACGTTTGTGCTGGGAGTTTT +
Preference number: 6 (lower is better)
Translates to: TQLALGATLSLM*RFGLYVCAGSF
Trigger: AAAACTCCCAGCACAAACGTAAAGCCCAAAACGCCACATCAAAGAAAGGGTGGCCCCCAGAGCCAGCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CCA 72 bp AGTTGGACTGTGAACCTGTTGCACAGGGACAGACAGTaGTTGAATCACAGCTGTGGTCACCCCTGTCTTTGG +
Preference number: 6 (lower is better)
Translates to: SWTVNLLHRDRQ*LNHSCGHPCLW
Trigger: CCAAAGACAGGGGTGACCACAGCTGTGATTCAACCACTGTCTGTCCCTGTGCAACAGGTTCACAGTCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261509.10
ENST00000503457.1
ENST00000504519.5
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
ENST00000513245.5
CDS CCA 72 bp GCCCTGCTCAGGCCTAACTCAGGGTTGTTCACCTGCTaGATCTCAGATGGTTTCTTTGAAGCCAACTCCAAG +
Preference number: 6 (lower is better)
Translates to: ALLRPNSGLFTC*ISDGFFEANSK
Trigger: CTTGGAGTTGGCTTCAAAGAAACCATCTGAGATCCAGCAGGTGAACAACCCTGAGTTAGGCCTGAGCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
ENST00000649826.1
CDS CCA 72 bp ATGAAGAAAGAGAACTGGGAAGTGGTAAAGCTTGTCTaGGGACGAGGCGCAGATCGTGCAAGGAGAGAGGAG +
Preference number: 6 (lower is better)
Translates to: MKKENWEVVKLV*GRGADRARREE
Trigger: CTCCTCTCTCCTTGCACGATCTGCGCCTCGTCCCCAGACAAGCTTTACCACTTCCCAGTTCTCTTTCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504519.5
CDS CAA 90 bp AGTGACTCTACACTCCAGATAAACTCGGCTCCCTTCTGCTACTTCTaGGCTCCTCAGCTTTTGGATGAATCGAGGTGCAGCTGGGAAGTG +
Preference number: 6 (lower is better)
Translates to: SDSTLQINSAPFCYF*APQLLDESRCSWEV
Trigger: CACTTCCCAGCTGCACCTCGATTCATCCAAAAGCTGAGGAGCCAAGAAGTAGCAGAAGGGAGCCGAGTTTATCTGGAGTGTAGAGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS TCA 72 bp GTAGGCAGTAGTGGTTCCATCAGGTCGGCAGAGATATaGAGTTGGACTGTGAACCTGTTGCACAGGGACAGA +
Preference number: 6 (lower is better)
Translates to: VGSSGSIRSAEI*SWTVNLLHRDR
Trigger: TCTGTCCCTGTGCAACAGGTTCACAGTCCAACTTCATATCTCTGCCGACCTGATGGAACCACTACTGCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261509.10
ENST00000503457.1
ENST00000504519.5
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
ENST00000513245.5
CDS CCA 72 bp CTCCTCGAGGCGTGTTCACCCAATTTGGTCTCCTTATaGGAAGGATGTTCACAGAGGCTTGCAGGAGAAGTA +
Preference number: 6 (lower is better)
Translates to: LLEACSPNLVSL*EGCSQRLAGEV
Trigger: TACTTCTCCTGCAAGCCTCTGTGAACATCCTTCCCATAAGGAGACCAAATTGGGTGAACACGCCTCGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CCA 72 bp TATCCTGAGGTCTCCTCGAGGCGTGTTCACCCAATTTaGTCTCCTTATGGGAAGGATGTTCACAGAGGCTTG +
Preference number: 6 (lower is better)
Translates to: YPEVSSRRVHPI*SPYGKDVHRGL
Trigger: CAAGCCTCTGTGAACATCCTTCCCATAAGGAGACCAAATTGGGTGAACACGCCTCGAGGAGACCTCAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CAA 72 bp ACACTCCAGATAAACTCGGCTCCCTTCTGCTACTTCTaGGCTCCTCAGCTTTTGGATGAATCGAGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: TLQINSAPFCYF*APQLLDESRCS
Trigger: GCTGCACCTCGATTCATCCAAAAGCTGAGGAGCCAAGAAGTAGCAGAAGGGAGCCGAGTTTATCTGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CAA 72 bp CTCTTGGGGGTCTTTCAGATCTCGCTTATTCCCAGCTaGCAACTTCTGGGCTCTGAATGCGATCTCGTTTGC +
Preference number: 6 (lower is better)
Translates to: LLGVFQISLIPS*QLLGSECDLVC
Trigger: GCAAACGAGATCGCATTCAGAGCCCAGAAGTTGCAAGCTGGGAATAAGCGAGATCTGAAAGACCCCCAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS TCA 72 bp CTCCTGAATTGGTTCATTTTCGTCTCCACTGTCCCTTaGTCTAGAACGAGGCCTTCTGACATGAGGATGGCC +
Preference number: 6 (lower is better)
Translates to: LLNWFIFVSTVP*SRTRPSDMRMA
Trigger: GGCCATCCTCATGTCAGAAGGCCTCGTTCTAGATCAAGGGACAGTGGAGACGAAAATGAACCAATTCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000507699.1
ENST00000507735.6
ENST00000512127.5
CDS CAA 90 bp CTCTGCTATGATCAGGGTATGGAGGTCCCCTCCCTCACAGTGGATTaGAATATCAGGAGTGTTGTGCAGTTCTTTCCCTTCACAGAACCA +
Preference number: 6 (lower is better)
Translates to: LCYDQGMEVPSLTVD*NIRSVVQFFPFTEP
Trigger: TGGTTCTGTGAAGGGAAAGAACTGCACAACACTCCTGATATTCAAATCCACTGTGAGGGAGGGGACCTCCATACCCTGATCATAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261509.10
ENST00000503457.1
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
ENST00000513245.5
CDS CAA 90 bp AACAAGCTCCTCTTGGGGGTCTTTCAGATCTCGCTTATTCCCAGCTaGCAACTTCTGGGCTCTGAATGCGATCTCGTTTGCAGAATGCAA +
Preference number: 6 (lower is better)
Translates to: NKLLLGVFQISLIPS*QLLGSECDLVCRMQ
Trigger: TTGCATTCTGCAAACGAGATCGCATTCAGAGCCCAGAAGTTGCAAGCTGGGAATAAGCGAGATCTGAAAGACCCCCAAGAGGAGCTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS TCA 72 bp TGCTTCTTTAGCAGCAACCACAAGCTCCAGGCTGAATaGGTTCTGTCCTGCTCGGTTGGTAGCTATACATGT +
Preference number: 6 (lower is better)
Translates to: CFFSSNHKLQAE*VLSCSVGSYTC
Trigger: ACATGTATAGCTACCAACCGAGCAGGACAGAACTCATTCAGCCTGGAGCTTGTGGTTGCTGCTAAAGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261509.10
ENST00000503290.1
ENST00000505667.6
ENST00000507699.1
ENST00000507735.6
ENST00000512127.5
CDS TCA 72 bp TCCCTTCACAGAACCATTTTTGACTGTGTAGACAAGTaGGCTGTTGTCCAAGAAGGCTGCCTCCACTGCTTC +
Preference number: 6 (lower is better)
Translates to: SLHRTIFDCVDK*AVVQEGCLHCF
Trigger: GAAGCAGTGGAGGCAGCCTTCTTGGACAACAGCTCACTTGTCTACACAGTCAAAAATGGTTCTGTGAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503457.1
CDS TCA 72 bp GATCTCGCTTATTCCCAGCTTGCAACTTCTGGGCTCTaGATGCGATCTCGTTTGCAGAATGCAACGGAGAAA +
Preference number: 6 (lower is better)
Translates to: DLAYSQLATSGL*MRSRLQNATEK
Trigger: TTTCTCCGTTGCATTCTGCAAACGAGATCGCATTCAGAGCCCAGAAGTTGCAAGCTGGGAATAAGCGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS GCA 72 bp GGAAAGCAGAAAGGCCCGGGAAGAAGTCAGTATTCTTaGTTTCTTCCTGCATGTCTGAGAGGGAGTCATAGA +
Preference number: 6 (lower is better)
Translates to: GKQKGPGRSQYS*FLPACLRGSHR
Trigger: TCTATGACTCCCTCTCAGACATGCAGGAAGAAAGCAAGAATACTGACTTCTTCCCGGGCCTTTCTGCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS GCA 72 bp AGTGACTCTACACTCCAGATAAACTCGGCTCCCTTCTaGTACTTCTTGGCTCCTCAGCTTTTGGATGAATCG +
Preference number: 6 (lower is better)
Translates to: SDSTLQINSAPF*YFLAPQLLDES
Trigger: CGATTCATCCAAAAGCTGAGGAGCCAAGAAGTAGCAGAAGGGAGCCGAGTTTATCTGGAGTGTAGAGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CCA 72 bp TTTCCGAGTCAAAATCTTCTGTTTCGGAGTCGGCTATaGCTCTCCGGGCCAGGTCAAGACTCTTGTTTATCT +
Preference number: 6 (lower is better)
Translates to: FPSQNLLFRSRL*LSGPGQDSCLS
Trigger: AGATAAACAAGAGTCTTGACCTGGCCCGGAGAGCCATAGCCGACTCCGAAACAGAAGATTTTGACTCGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000508898.5
CDS CCA 72 bp TATGGAGGGAGCAGGTCCCATCGAGATCTCTTTGAATaGTGTAGTGATCACTCTTTGGAGAGATCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: YGGSRSHRDLFE*CSDHSLERSAS
Trigger: GGAAGCAGATCTCTCCAAAGAGTGATCACTACACCATTCAAAGAGATCTCGATGGGACCTGCTCCCTCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261509.10
ENST00000393726.7
ENST00000505667.6
ENST00000507699.1
ENST00000507735.6
ENST00000511682.1
ENST00000512127.5
ENST00000513187.5
CDS CAA 72 bp CCTGTGTTTTGGAGCTTCTCAATAAACACAGGGGGTTaGTGTGCTTCTTTAGCAGCAACCACAAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: PVFWSFSINTGG*CASLAATTSSR
Trigger: CCTGGAGCTTGTGGTTGCTGCTAAAGAAGCACACAAACCCCCTGTGTTTATTGAGAAGCTCCAAAACACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261509.10
ENST00000503290.1
ENST00000505667.6
ENST00000507699.1
ENST00000507735.6
ENST00000512127.5
CDS CAA 72 bp GGCACTTGGCCTAGACAGCGATTAGATGTGTCCTTCTaGGACTCTGAAGTGAGAGCTTTTCAATGCTTGGTC +
Preference number: 6 (lower is better)
Translates to: GTWPRQRLDVSF*DSEVRAFQCLV
Trigger: GACCAAGCATTGAAAAGCTCTCACTTCAGAGTCCAAGAAGGACACATCTAATCGCTGTCTAGGCCAAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511948.1
CDS CAA 90 bp GAAAGCAGGACAGCTGGTGTTGGAAGAGATTTATTACTGTTAGCTTaGCCGTTAATCAGTCCATTTACTCCACGGCTGGGATGGACTCCG +
Preference number: 6 (lower is better)
Translates to: ESRTAGVGRDLLLLA*PLISPFTPRLGWTP
Trigger: CGGAGTCCATCCCAGCCGTGGAGTAAATGGACTGATTAACGGCAAAGCTAACAGTAATAAATCTCTTCCAACACCAGCTGTCCTGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
ENST00000649826.1
CDS CAA 90 bp ATTGTTCAGGAGGTCCTCCTTGAAGCGAAGTTTTCGTTCCAGGTCTaGAATAACAGCATCCTTTGTGCCTTGAATTTCCTCATCGGAGGC +
Preference number: 6 (lower is better)
Translates to: IVQEVLLEAKFSFQV*NNSILCALNFLIGG
Trigger: GCCTCCGATGAGGAAATTCAAGGCACAAAGGATGCTGTTATTCAAGACCTGGAACGAAAACTTCGCTTCAAGGAGGACCTCCTGAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261509.10
ENST00000393726.7
ENST00000505667.6
ENST00000507735.6
ENST00000510998.5
ENST00000512127.5
ENST00000649826.1
CDS TCA 72 bp GAAGAAGTCAGTATTCTTGCTTTCTTCCTGCATGTCTaGGAGGGAGTCATAGAAGGACTCATGGGAGGAGGT +
Preference number: 6 (lower is better)
Translates to: EEVSILAFFLHV*EGVIEGLMGGG
Trigger: ACCTCCTCCCATGAGTCCTTCTATGACTCCCTCTCAGACATGCAGGAAGAAAGCAAGAATACTGACTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000511948.1
CDS CCA 72 bp CTGATTTCCTTCTGTAGGGTAAAAGCTGATGCAGGGTaGTACATCTCTCCACATAGTACATGTGGCAAGCAG +
Preference number: 6 (lower is better)
Translates to: LISFCRVKADAG*YISPHSTCGKQ
Trigger: CTGCTTGCCACATGTACTATGTGGAGAGATGTACCACCCTGCATCAGCTTTTACCCTACAGAAGGAAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507699.1
CDS CCA 72 bp TCTTTCAGATCTCGCTTATTCCCAGCTTGCAACTTCTaGGCTCTGAATGCGATCTCGTTTGCAGAATGCAAC +
Preference number: 6 (lower is better)
Translates to: SFRSRLFPACNF*ALNAISFAECN
Trigger: GTTGCATTCTGCAAACGAGATCGCATTCAGAGCCCAGAAGTTGCAAGCTGGGAATAAGCGAGATCTGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS CCA 72 bp TCCAGGGGGTGCACACATTTATCATGGTTTCACGTTTaGTGTTGCTGTCATCTGGACGTCTTCATTTTGGAG +
Preference number: 6 (lower is better)
Translates to: SRGCTHLSWFHV*CCCHLDVFILE
Trigger: CTCCAAAATGAAGACGTCCAGATGACAGCAACACCAAACGTGAAACCATGATAAATGTGTGCACCCCCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511948.1
CDS CAA 90 bp GCGAAGTTTTCGTTCCAGGTCTTGAATAACAGCATCCTTTGTGCCTaGAATTTCCTCATCGGAGGCTATTCTAGCAGTTCTACTGGCCTT +
Preference number: 6 (lower is better)
Translates to: AKFSFQVLNNSILCA*NFLIGGYSSSSTGL
Trigger: AAGGCCAGTAGAACTGCTAGAATAGCCTCCGATGAGGAAATTCAAGGCACAAAGGATGCTGTTATTCAAGACCTGGAACGAAAACTTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261509.10
ENST00000393726.7
ENST00000505667.6
ENST00000507735.6
ENST00000510998.5
ENST00000512127.5
ENST00000649826.1
CDS GCA 72 bp TCGCTTATTCCCAGCTTGCAACTTCTGGGCTCTGAATaGGATCTCGTTTGCAGAATGCAACGGAGAAAATTA +
Preference number: 6 (lower is better)
Translates to: SLIPSLQLLGSE*DLVCRMQRRKL
Trigger: TAATTTTCTCCGTTGCATTCTGCAAACGAGATCGCATTCAGAGCCCAGAAGTTGCAAGCTGGGAATAAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512127.5
CDS CAA 72 bp ACAGTGGTTGAATCACAGCTGTGGTCACCCCTGTCTTaGGAGATGATGATCCTATTGTCAAGGAAACAGAAG +
Preference number: 6 (lower is better)
Translates to: TVVESQLWSPLS*EMMILLSRKQK
Trigger: CTTCTGTTTCCTTGACAATAGGATCATCATCTCCAAAGACAGGGGTGACCACAGCTGTGATTCAACCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261509.10
ENST00000503457.1
ENST00000504519.5
ENST00000505667.6
ENST00000508898.5
ENST00000512127.5
ENST00000513245.5
CDS CAA 72 bp GAGGTCCTCCTTGAAGCGAAGTTTTCGTTCCAGGTCTaGAATAACAGCATCCTTTGTGCCTTGAATTTCCTC +
Preference number: 6 (lower is better)
Translates to: EVLLEAKFSFQV*NNSILCALNFL
Trigger: GAGGAAATTCAAGGCACAAAGGATGCTGTTATTCAAGACCTGGAACGAAAACTTCGCTTCAAGGAGGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261509.10
ENST00000393726.7
ENST00000505667.6
ENST00000507735.6
ENST00000510998.5
ENST00000512127.5
ENST00000649826.1
CDS CCA 72 bp CTGATGCCACTGGGTTGGGTATTTGTTCTCCTGGTGTaGTTCACTATTAATGTCGAGAAATGTAAACGTCCA +
Preference number: 6 (lower is better)
Translates to: LMPLGWVFVLLV*FTINVEKCKRP
Trigger: TGGACGTTTACATTTCTCGACATTAATAGTGAACCACACCAGGAGAACAAATACCCAACCCAGTGGCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261509.10
ENST00000505667.6
CDS CAA 72 bp GAAAGTGTTGGAAGTGGTCATTGTTGGATTCTCCCATaGACTCGTAACTACAGTTTTCAGTGTTGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: ESVGSGHCWILP*TRNYSFQCWLR
Trigger: CCTCAGCCAACACTGAAAACTGTAGTTACGAGTCAATGGGAGAATCCAACAATGACCACTTCCAACACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261509.10
ENST00000505667.6
ENST00000512127.5
CDS CAA 72 bp TCGTTCCAGGTCTTGAATAACAGCATCCTTTGTGCCTaGAATTTCCTCATCGGAGGCTATTCTAGCAGTTCT +
Preference number: 6 (lower is better)
Translates to: SFQVLNNSILCA*NFLIGGYSSSS
Trigger: AGAACTGCTAGAATAGCCTCCGATGAGGAAATTCAAGGCACAAAGGATGCTGTTATTCAAGACCTGGAACGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261509.10
ENST00000393726.7
ENST00000505667.6
ENST00000507735.6
ENST00000510998.5
ENST00000512127.5
ENST00000649826.1
CDS CCA 72 bp GGAGACTTTGTATTCCTGATTAGCTGTTTCCTCTTCTaGCTCCTGAATATTAAAGACAGTTGCACTGTCAGC +
Preference number: 6 (lower is better)
Translates to: GDFVFLISCFLF*LLNIKDSCTVS
Trigger: GCTGACAGTGCAACTGTCTTTAATATTCAGGAGCCAGAAGAGGAAACAGCTAATCAGGAATACAAAGTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261509.10
ENST00000393726.7
ENST00000507735.6
ENST00000510998.5
ENST00000511611.1
ENST00000512127.5
CDS CCA 72 bp ACGTTTGGTGTTGCTGTCATCTGGACGTCTTCATTTTaGAGAATTCCTCATATTCTGAGGCTCAGTGAGAAA +
Preference number: 6 (lower is better)
Translates to: TFGVAVIWTSSF*RIPHILRLSEK
Trigger: TTTCTCACTGAGCCTCAGAATATGAGGAATTCTCCAAAATGAAGACGTCCAGATGACAGCAACACCAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511948.1
CDS TCA 72 bp CTGTTTTCTGAAACTGTGTTATTTTTGAGAGATAACTaGTTGCAGTCTGGATCCGGGACAGAGGTAGGGAAA +
Preference number: 6 (lower is better)
Translates to: LFSETVLFLRDN*LQSGSGTEVGK
Trigger: TTTCCCTACCTCTGTCCCGGATCCAGACTGCAATCAGTTATCTCTCAAAAATAACACAGTTTCAGAAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511948.1
CDS CCA 72 bp CTTTGGATTTCCAGCCACTCTACATGTGAAAGTTACTaGCATTCCCTCAAAGATCTTGTAATGTTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: LWISSHSTCESY*HSLKDLVMFQL
Trigger: AAGCTGAAACATTACAAGATCTTTGAGGGAATGCCAGTAACTTTCACATGTAGAGTGGCTGGAAATCCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261509.10
ENST00000393726.7
ENST00000505667.6
ENST00000507325.5
ENST00000507699.1
ENST00000507735.6
ENST00000511682.1
ENST00000512127.5
ENST00000513187.5
CDS CCA 72 bp TTCCTGAATGATACTTGGGTATTTGTTCTCCTGGTGTaGTTCACTATTAATGTCGAGAAATGTAAACGTCCA +
Preference number: 6 (lower is better)
Translates to: FLNDTWVFVLLV*FTINVEKCKRP
Trigger: TGGACGTTTACATTTCTCGACATTAATAGTGAACCACACCAGGAGAACAAATACCCAAGTATCATTCAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503290.1
CDS CCA 72 bp ATTTATCATGGTTTCACGTTTGGTGTTGCTGTCATCTaGACGTCTTCATTTTGGAGAATTCCTCATATTCTG +
Preference number: 6 (lower is better)
Translates to: IYHGFTFGVAVI*TSSFWRIPHIL
Trigger: CAGAATATGAGGAATTCTCCAAAATGAAGACGTCCAGATGACAGCAACACCAAACGTGAAACCATGATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511948.1
CDS CAA 90 bp GTGACAAGAGGCTCACATTTTGTTGAGAGAAAGAAGCATCATAGCTaGTATGGTTCTGACATTATAAAAATGAAGAAAGCCATGAGGAAA +
Preference number: 6 (lower is better)
Translates to: VTRGSHFVERKKHHS*YGSDIIKMKKAMRK
Trigger: TTTCCTCATGGCTTTCTTCATTTTTATAATGTCAGAACCATACAAGCTATGATGCTTCTTTCTCTCAACAAAATGTGAGCCTCTTGTCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508898.5