RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PACSIN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124507

Ensembl transcript IDs: ENST00000244458.7, ENST00000374043.6, ENST00000486120.5, ENST00000487760.1, ENST00000493633.5, ENST00000538621.2, ENST00000620693.4

Found 858 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGTaGAGGCAGGAGCTACAGGAGGAGGCCGTGGGCATGGCAAGGGGC +
Preference number: 1 (lower is better)
Translates to: LLAEPHQGGPVQHRG*RQELQEEAVGMARG
Trigger: GCCCCTTGCCATGCCCACGGCCTCCTCCTGTAGCTCCTGCCTGCACCCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 90 bp GCAGGCAGGAGCTACAGGAGGAGGCCGTGGGCATGGCAAGGGGCGTaGCCCCCACACTCGGTGTTGAGTGCCCTGACACCAGCACTGGCA +
Preference number: 1 (lower is better)
Translates to: AGRSYRRRPWAWQGA*PPHSVLSALTPALA
Trigger: TGCCAGTGCTGGTGTCAGGGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCTCCTGTAGCTCCTGCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR GCA 90 bp CTCAGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTaGGGCCTTCACGGGCTCCCCAGGCAGGCCAGAGAAGAGGACAGA +
Preference number: 1 (lower is better)
Translates to: LSCRLSPDVSGWRHP*GLHGLPRQAREEDR
Trigger: TCTGTCCTCTTCTCTGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR GCA 90 bp AAGCCCCCGCACCCTCTCGTGCGGTACCTAGCACTCCGGCACCACTaGTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCC +
Preference number: 1 (lower is better)
Translates to: KPPHPLVRYLALRHH*FHQPAGGPFAPTHP
Trigger: GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCGGAGTGCTAGGTACCGCACGAGAGGGTGCGGGGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 90 bp GCCCTGAGGACCTGGGGACTGAGAGAGTGGTCCCAAACAGGGCCCTaGAGGTGGCTGCTCAGGACGGAGGGGGTTTCGAGTCCCTGCCCT +
Preference number: 1 (lower is better)
Translates to: ALRTWGLREWSQTGP*RWLLRTEGVSSPCP
Trigger: AGGGCAGGGACTCGAAACCCCCTCCGTCCTGAGCAGCCACCTCCAGGGCCCTGTTTGGGACCACTCTCTCAGTCCCCAGGTCCTCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 90 bp GTGTTGAGTGCCCTGACACCAGCACTGGCAGGTAGGGCTGGGCCCTaGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGG +
Preference number: 1 (lower is better)
Translates to: VLSALTPALAGRAGP*SSGGLPGRRPSRSG
Trigger: CCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCCCAGCCCTACCTGCCAGTGCTGGTGTCAGGGCACTCAACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 90 bp CTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGATGTCTCAGGCTaGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAGA +
Preference number: 1 (lower is better)
Translates to: LSAELSCRLSPDVSG*RHPCGLHGLPRQAR
Trigger: TCTGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR GCA 90 bp AGGCCTGCCCCAGCTCAGGCCCTGCCAGAGTGTCAGGACCCTCTGTaGCCACATGAAGAAGGTCAGAGCCTTGAGGCTGGGGTCTACTAC +
Preference number: 1 (lower is better)
Translates to: RPAPAQALPECQDPL*PHEEGQSLEAGVYY
Trigger: GTAGTAGACCCCAGCCTCAAGGCTCTGACCTTCTTCATGTGGGCACAGAGGGTCCTGACACTCTGGCAGGGCCTGAGCTGGGGCAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 90 bp CAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTaGGGACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCC +
Preference number: 1 (lower is better)
Translates to: QPWFLAEPGRRMVVN*GQNTLLAEPHQGGP
Trigger: GGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGTCCCCAGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR TCA 90 bp TGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTTGCTTCAGGCTCTaGGGAGCCCAGGACACACCTCAGGCTGCAGCCGAAGCTCGGAGA +
Preference number: 1 (lower is better)
Translates to: WSWEDCRLPKACFRL*GAQDTPQAAAEARR
Trigger: TCTCCGAGCTTCGGCTGCAGCCTGAGGTGTGTCCTGGGCTCCTCAGAGCCTGAAGCAAGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR TCA 90 bp GAGGGGACAGGTCCTCTGCAAGTTGCTGAGGGGGTTTGGATCTGCTaGAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGAAGGGCCT +
Preference number: 1 (lower is better)
Translates to: EGTGPLQVAEGVWIC*RADAESADSWKEGP
Trigger: AGGCCCTTCTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCTCAGCAACTTGCAGAGGACCTGTCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 90 bp GGAAGGGTCAGGAGACATCCATCCCTCAGGGCTCAGGAGACTCTTTaGTGGAACCCGAAGAGCAGATGTTGTGATGTTGGGCTAAGTCCT +
Preference number: 1 (lower is better)
Translates to: GRVRRHPSLRAQETL*WNPKSRCCDVGLSP
Trigger: AGGACTTAGCCCAACATCACAACATCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGCCCTGAGGGATGGATGTCTCCTGACCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 90 bp AGGGTCAGGAGACATCCATCCCTCAGGGCTCAGGAGACTCTTTGGTaGAACCCGAAGAGCAGATGTTGTGATGTTGGGCTAAGTCCTAAG +
Preference number: 1 (lower is better)
Translates to: RVRRHPSLRAQETLW*NPKSRCCDVGLSPK
Trigger: CTTAGGACTTAGCCCAACATCACAACATCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGCCCTGAGGGATGGATGTCTCCTGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 90 bp CCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATGGAGGCTGATGTaGAACCCAGTGATTTTATGGTTTTTGGATGGACATGGAGGGAGA +
Preference number: 1 (lower is better)
Translates to: PRALQVQGLASWRLM*NPVILWFLDGHGGR
Trigger: TCTCCCTCCATGTCCATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 90 bp GGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATaGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATGGA +
Preference number: 1 (lower is better)
Translates to: GMVRPRALQVQGLAS*RLMWNPVILWFLDG
Trigger: TCCATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR GCA 90 bp TTGTATTTATATACCTTTAAATTACACAATCATGTACAAAACAGGTaGATTGCTGAGACCACAGCACTTCTCGGAGTTTCACAAGTGTCG +
Preference number: 1 (lower is better)
Translates to: LYLYTFKLHNHVQNR*IAETTALLGVSQVS
Trigger: CGACACTTGTGAAACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTAATTTAAAGGTATATAAATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCGGCTGGAGGCACCCGTaGGGCCTTCACGGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAGWRHP*GLHGLP
Trigger: GGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCC...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCGTGGGACGGAGGGAGTaGGGCGGGGTGGAAGGGTCA +
Preference number: 2 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGVGRRE*GGVEGS
Trigger: TGACCCTTCCACCCCGCCTCACTCCCTCCGTCCCAC...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCAGGTGCCGGCAGCCTaGAGTGGAGTGGGACGGAGG +
Preference number: 2 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGQVPAA*SGVGRR
Trigger: CCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CAA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTaGAGTGCCCTGACACCAGCACTGGCAGGTAGGGCTGGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSV*SALTPALAGRAGPW
Trigger: CCAGGGCCCAGCCCTACCTGCCAGTGCTGGTGTCAGGGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCTGGCACAGCCCGGGCTaGGGGCCTGCATGCCCTTCA +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAWHSPG*GPACPS
Trigger: TGAAGGGCATGCAGGCCCTCAGCCCGGGCTGTGCCA...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCAGGCTGGAGTCCAGCTaGGGCTGCAGCCCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSARLESS*GCSPSQ
Trigger: CTGGGAGGGGCTGCAGCCCCAGCTGGACTCCAGCCT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCGGCAGGAAGGAGGTCTaGCTGTCCCCGGGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAGRKEV*LSPGCH
Trigger: ATGGCACCCCGGGGACAGGCAGACCTCCTTCCTGCC...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCGACTGTTACCTACCCTaGGGCCACCCCAAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGDCYLP*GHPKPQ
Trigger: CTGGGGCTTGGGGTGGCCCCAGGGTAGGTAACAGTC...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCGTGGGACGGAGGGAGTaGGGCGGGGTGGAAGGGTCA +
Preference number: 2 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPVGRRE*GGVEGS
Trigger: TGACCCTTCCACCCCGCCTCACTCCCTCCGTCCCAC...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCCCCGGGCTGAGGGCCTaGATGCCCTTCATTCACCCT +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAPGLRA*MPFIHP
Trigger: AGGGTGAATGAAGGGCATGCAGGCCCTCAGCCCGGG...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCGGACACACCTCAGGCTaGAGCCGAAGCTCGGAGACC +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAGHTSG*SRSSET
Trigger: GGTCTCCGAGCTTCGGCTGCAGCCTGAGGTGTGTCC...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGGACTGTTACCTACCCTaGGGCCACCCCAAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVDCYLP*GHPKPQ
Trigger: CTGGGGCTTGGGGTGGCCCCAGGGTAGGTAACAGTC...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCGGTCCCAAGGGACGTaGCTAGGAGTAGAAGGGTGC +
Preference number: 2 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGRSQGT*LGVEGC
Trigger: GCACCCTTCTACTCCTAGCCACGTCCCTTGGGACCG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGAGGAGGCCGTGGGCATaGCAAGGGGCGTGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWRRPWA*QGAWPP
Trigger: TGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCGCTTGCTTCAGGCTCTaGGGAGCCCAGGACACACCT +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAACFRL*GAQDTP
Trigger: AGGTGTGTCCTGGGCTCCTCAGAGCCTGAAGCAAGC...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTGGCTGGAGGCACCCGTaGGGCCTTCACGGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTGWRHP*GLHGLP
Trigger: GGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCC...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGCACTCCGGCACCACTaGTTTCACCAACCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPALRHH*FHQPAG
Trigger: ACCTGCTGGTTGGTGAAAGCAGTGGTGCCGGAGTGC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGTCCCTCAGATGGGCCTaGGGCTGGGAGGGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWSLRWA*GWEGWH
Trigger: GTGCCAGCCCTCCCAGCCCCAGGCCCATCTGAGGGA...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCTCTTGGTCCCTCAGATaGGCCTGGGGCTGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPSWSLR*AWGWEG
Trigger: GCCCTCCCAGCCCCAGGCCCATCTGAGGGACCAAGA...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCTGCGTAACAGCGTCTTaGTCCCTCAGATGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPCVTAS*SLRWAW
Trigger: CCAGGCCCATCTGAGGGACCAAGACGCTGTTACGCA...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGACAGGGCCCTGGAGGTaGCTGCTCAGGACGGAGGGG +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWTGPWR*LLRTEG
Trigger: CCCCTCCGTCCTGAGCAGCCACCTCCAGGGCCCTGT...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGTGGCACAGCCCGGGCTaGGGGCCTGCATGCCCTTCA +
Preference number: 2 (lower is better)
Translates to: AAEARRPDSDKEGGADGRWHSPG*GPACPS
Trigger: TGAAGGGCATGCAGGCCCTCAGCCCGGGCTGTGCCA...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCAGGGGACAGGTCCTCTaGAAGTTGCTGAGGGGGTTT +
Preference number: 2 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPRGQVL*KLLRGF
Trigger: AAACCCCCTCAGCAACTTGCAGAGGACCTGTCCCCT...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTGGCTGGAGGCACCCGTaGGGCCTTCACGGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSGWRHP*GLHGLP
Trigger: GGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCC...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGGCAGGAAGGAGGTCTaGCTGTCCCCGGGGTGCCAT +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWGRKEV*LSPGCH
Trigger: ATGGCACCCCGGGGACAGGCAGACCTCCTTCCTGCC...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGGCCCTGGAGGTGGCTaGTCAGGACGGAGGGGGTTT +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWGPGGG*SGRRGF
Trigger: AAACCCCCTCCGTCCTGAGCAGCCACCTCCAGGGCC...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTACCAGGGCGGGCCCGTaGAGCATCGTGGGTGCAGGC +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTTRAGP*SIVGAG
Trigger: GCCTGCACCCACGATGCTGCACGGGCCCGCCCTGGT...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAGGGGAGGGGCGGCAGTaGGGAGGAGTGACGGGAGTA +
Preference number: 2 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQGEGRQ*GGVTGV
Trigger: TACTCCCGTCACTCCTCCCCACTGCCGCCCCTCCCC...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGCAGCCTGGAGTGGAGTaGGACGGAGGGAGTGAGGCG +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWQPGVE*DGGSEA
Trigger: CGCCTCACTCCCTCCGTCCCACTCCACTCCAGGCTG...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCCTCCTCCCCAGCAAATaGGAGCAGGCTGCTACTGTT +
Preference number: 2 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPLLPSK*EQAATV
Trigger: AACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGGAG...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCAAGGCTTGGCCTCATaGAGGCTGATGTGGAACCCA +
Preference number: 2 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGQGLAS*RLMWNP
Trigger: TGGGTTCCACATCAGCCTCCATGAGGCCAAGCCTTG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCGGGAGAATGTTGTTCTaGGGGCCGTGGGGACAAGGA +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAGRMLF*GPWGQG
Trigger: TCCTTGTCCCCACGGCCCCCAGAACAACATTCTCCC...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCGGTTTTGTCCAACCCTaGTCTGCTTCCCAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAGFVQP*SASQAP
Trigger: GGGGGCTTGGGAAGCAGACCAGGGTTGGACAAAACC...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCCTCTCTCTCTTTACCTaGAGGCCCAGGAGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSALSLFT*RPRRPG
Trigger: ACCTGGCCTCCTGGGCCTCCAGGTAAAGAGAGAGAG...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTAGGAGGCCGTGGGCATaGCAAGGGGCGTGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTRRPWA*QGAWPP
Trigger: TGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGGTGGGACGGAGGGAGTaGGGCGGGGTGGAAGGGTCA +
Preference number: 2 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLVGRRE*GGVEGS
Trigger: TGACCCTTCCACCCCGCCTCACTCCCTCCGTCCCAC...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACACCCCAGTGACACCATaGCTTCCTCCAGCTCACCCC +
Preference number: 2 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHTPVTP*LPPAHP
Trigger: GGGGTGAGCTGGAGGAAGTCATGGTGTCACTGGGGT...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCAGGGGACAGGTCCTCTaGAAGTTGCTGAGGGGGTTT +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSARGQVL*KLLRGF
Trigger: AAACCCCCTCAGCAACTTGCAGAGGACCTGTCCCCT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCTGGAGCTGGGAGGACTaGAGGCTTCCAAAAGCTTGC +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAWSWED*RLPKAC
Trigger: GCAAGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCA...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTGGGGAGGGGCGGCAGTaGGGAGGAGTGACGGGAGTA +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTGEGRQ*GGVTGV
Trigger: TACTCCCGTCACTCCTCCCCACTGCCGCCCCTCCCC...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCGCTCAGGAGACTCTTTaGTGGAACCCGAAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGAQETL*WNPKSR
Trigger: TCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGC...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGCAGCCTGGAGTGGAGTaGGACGGAGGGAGTGAGGCG +
Preference number: 2 (lower is better)
Translates to: AAEARRPDSDKEGGADGRQPGVE*DGGSEA
Trigger: CGCCTCACTCCCTCCGTCCCACTCCACTCCAGGCTG...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAAACCAGGCCAGGGAATaGGGCAGGTGCCGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQNQARE*GRCRQP
Trigger: AGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCCCTGGAAACCTCCATaGGGGAGGAGGGTGACCGTT +
Preference number: 2 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPPWKPP*GRRVTV
Trigger: AACGGTCACCCTCCTCCCCCATGGAGGTTTCCAGGG...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAGGCTGCTACTGTTGCTaGCTTTGCCGTAGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPGCYCC*LCRRFG
Trigger: CCCAAACCTACGGCAAAGCCAGCAACAGTAGCAGCC...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGCCTGATGTCTCAGGCTaGAGGCACCCGTGCGGCCTT +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWPDVSG*RHPCGL
Trigger: AAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGG...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTGTGGGACGGAGGGAGTaGGGCGGGGTGGAAGGGTCA +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSVGRRE*GGVEGS
Trigger: TGACCCTTCCACCCCGCCTCACTCCCTCCGTCCCAC...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCATTCCTCCTTTCTGCTaGACTCAGCTGCAGGCTCTC +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAIPPFC*TQLQAL
Trigger: GAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAAT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGAGGGAATGGGGCAGGTaGCGGCAGCCTGGAGTGGAG +
Preference number: 2 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLREWGR*RQPGVE
Trigger: CTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCT...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCTTAGGCCAAGAGCCTTaGAGGTACAAGGCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSALGQEP*RYKAWP
Trigger: AGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAA...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCCAGGAGACTCTTTGGTaGAACCCGAAGAGCAGATGT +
Preference number: 2 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPQETLW*NPKSRC
Trigger: ACATCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTG...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTCAGGTGCCGGCAGCCTaGAGTGGAGTGGGACGGAGG +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSQVPAA*SGVGRR
Trigger: CCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTG...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTAACCAGGCCAGGGAATaGGGCAGGTGCCGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTNQARE*GRCRQP
Trigger: AGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGAACCAGGCCAGGGAATaGGGCAGGTGCCGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLNQARE*GRCRQP
Trigger: AGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACTTGAGAGCAGGGTGGTaGAGGAAGGGAAGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHLRAGW*RKGSRA
Trigger: TGCCCTGCTTCCCTTCCTCCACCACCCTGCTCTCAA...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTTCTTGGTCCCTCAGATaGGCCTGGGGCTGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTSWSLR*AWGWEG
Trigger: GCCCTCCCAGCCCCAGGCCCATCTGAGGGACCAAGA...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTTGGCACAGCCCGGGCTaGGGGCCTGCATGCCCTTCA +
Preference number: 2 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAWHSPG*GPACPS
Trigger: TGAAGGGCATGCAGGCCCTCAGCCCGGGCTGTGCCA...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTTGGCACAGCCCGGGCTaGGGGCCTGCATGCCCTTCA +
Preference number: 2 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSWHSPG*GPACPS
Trigger: TGAAGGGCATGCAGGCCCTCAGCCCGGGCTGTGCCA...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGTTCCAAGGTAAGCGATaGGGGACAGAGGCCCCCAAC +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWFQGKR*GTEAPN
Trigger: GTTGGGGGCCTCTGTCCCTCATCGCTTACCTTGGAA...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCTACTGTTGCTGGCTTTaGCGTAGGTTTGGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPYCCWL*RRFGGP
Trigger: GGGACCCCCAAACCTACGGCAAAGCCAGCAACAGTA...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACTACTGTTGCTGGCTTTaGCGTAGGTTTGGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHYCCWL*RRFGGP
Trigger: GGGACCCCCAAACCTACGGCAAAGCCAGCAACAGTA...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTCCCCAGCTCAGGCCCTaGCAGAGTGTCAGGACCCTC +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSPQLRP*QSVRTL
Trigger: GAGGGTCCTGACACTCTGGCAGGGCCTGAGCTGGGG...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGACCCCAGCCTCCAGGTaGCCCTGCAAATGCTCTGTC +
Preference number: 2 (lower is better)
Translates to: AAEARRPDSDKEGGADGRTPASR*PCKCSV
Trigger: GACAGAGCATTTGCAGGGCCACCTGGAGGCTGGGGT...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAACCCCAGCCTCCAGGTaGCCCTGCAAATGCTCTGTC +
Preference number: 2 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQTPASR*PCKCSV
Trigger: GACAGAGCATTTGCAGGGCCACCTGGAGGCTGGGGT...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGCTTCTGCACTGGAGCTaGGAGGACTGCAGGCTTCCA +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWLLHWS*EDCRLP
Trigger: TGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAG...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTTCCCAAACAGGGCCCTaGAGGTGGCTGCTCAGGACG +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTSQTGP*RWLLRT
Trigger: CGTCCTGAGCAGCCACCTCCAGGGCCCTGTTTGGGA...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTAGGGAATGGGGCAGGTaGCGGCAGCCTGGAGTGGAG +
Preference number: 2 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSREWGR*RQPGVE
Trigger: CTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCT...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTAGGGAATGGGGCAGGTaGCGGCAGCCTGGAGTGGAG +
Preference number: 2 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFREWGR*RQPGVE
Trigger: CTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCT...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTAGCAGGTGGGCCCTTTaGTCCCACCCACCCCCAAAG +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSSRWAL*SHPPPK
Trigger: CTTTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCT...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGTGGAGCTGGGAGGACTaGAGGCTTCCAAAAGCTTGC +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWWSWED*RLPKAC
Trigger: GCAAGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCA...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGACCCCAGCCTCCAGGTaGCCCTGCAAATGCTCTGTC +
Preference number: 2 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLTPASR*PCKCSV
Trigger: GACAGAGCATTTGCAGGGCCACCTGGAGGCTGGGGT...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTGACTGTTACCTACCCTaGGGCCACCCCAAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSDCYLP*GHPKPQ
Trigger: CTGGGGCTTGGGGTGGCCCCAGGGTAGGTAACAGTC...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGACAGGAGACTCTTTGGTaGAACCCGAAGAGCAGATGT +
Preference number: 2 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGQETLW*NPKSRC
Trigger: ACATCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTG...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGACAGGTGCCGGCAGCCTaGAGTGGAGTGGGACGGAGG +
Preference number: 2 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGQVPAA*SGVGRR
Trigger: CCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTG...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGTTGAGAGCAGGGTGGTaGAGGAAGGGAAGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: AAEARRPDSDKEGGADGRLRAGW*RKGSRA
Trigger: TGCCCTGCTTCCCTTCCTCCACCACCCTGCTCTCAA...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGATCCCTCAGATGGGCCTaGGGCTGGGAGGGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGSLRWA*GWEGWH
Trigger: GTGCCAGCCCTCCCAGCCCCAGGCCCATCTGAGGGA...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGCTCCTCCCCAGCAAATaGGAGCAGGCTGCTACTGTT +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWLLPSK*EQAATV
Trigger: AACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGGAG...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCTCATGGAGGCTGATGTaGAACCCAGTGATTTTATGG +
Preference number: 2 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPSWRLM*NPVILW
Trigger: CCATAAAATCACTGGGTTCCACATCAGCCTCCATGA...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTCCTGATGTCTCAGGCTaGAGGCACCCGTGCGGCCTT +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSPDVSG*RHPCGL
Trigger: AAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGG...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGACTCTGACCCAGGTTTaGAGACATGGAAGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWTLTQV*RHGRAA
Trigger: GGCAGCCCTTCCATGTCTCCAAACCTGGGTCAGAGT...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGGGTTTTGTCCAACCCTaGTCTGCTTCCCAAGCCCCC +
Preference number: 2 (lower is better)
Translates to: AAEARRPDSDKEGGADGRGFVQP*SASQAP
Trigger: GGGGGCTTGGGAAGCAGACCAGGGTTGGACAAAACC...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTAGCTCCCCGCCCTCATaGGGTTTTGTCCAACCCTGG +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTSSPPS*GFVQPW
Trigger: CCAGGGTTGGACAAAACCCCATGAGGGCGGGGAGCT...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGAGGGGAAACAGGGCTaGGCTGGCTCTCTCTCTTTA +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWEGKQG*AGSLSL
Trigger: TAAAGAGAGAGAGCCAGCCCAGCCCTGTTTCCCCTC...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTACCCCAGTGACACCATaGCTTCCTCCAGCTCACCCC +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSTPVTP*LPPAHP
Trigger: GGGGTGAGCTGGAGGAAGTCATGGTGTCACTGGGGT...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCAAGGTCCTTTCACTCTaGCCCAGGTTTGGAGACATG +
Preference number: 2 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPKVLSL*PRFGDM
Trigger: CATGTCTCCAAACCTGGGTCAGAGTGAAAGGACCTT...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTCTAGGAGTAGAAGGGTaGTCCCCGGGGCAGAGTGGA +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSLGVEG*SPGQSG
Trigger: TCCACTCTGCCCCGGGGAGCACCCTTCTACTCCTAG...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCCCGGGCTGAGGGCCTaGATGCCCTTCATTCACCCT +
Preference number: 2 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSPGLRA*MPFIHP
Trigger: AGGGTGAATGAAGGGCATGCAGGCCCTCAGCCCGGG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAAGGGGACAGGTCCTCTaGAAGTTGCTGAGGGGGTTT +
Preference number: 2 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQRGQVL*KLLRGF
Trigger: AAACCCCCTCAGCAACTTGCAGAGGACCTGTCCCCT...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGCAGGCTGCTACTGTTaGTGGCTTTGCCGTAGGTTT +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWAGCYC*WLCRRF
Trigger: AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGC...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGTGTCAGGACCCTCTGTaGCCACATGAAGAAGGTCAG +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWCQDPL*PHEEGQ
Trigger: CTGACCTTCTTCATGTGGGCACAGAGGGTCCTGACA...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATGGGGAGGGGCGGCAGTaGGGAGGAGTGACGGGAGTA +
Preference number: 2 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHGEGRQ*GGVTGV
Trigger: TACTCCCGTCACTCCTCCCCACTGCCGCCCCTCCCC...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTGGGAGTGAGGCGGGGTaGAAGGGTCAGGAGACATCC +
Preference number: 2 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSGSEAG*KGQETS
Trigger: GGATGTCTCCTGACCCTTCCACCCCGCCTCACTCCC...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGACAGCCTGGAGTGGAGTaGGACGGAGGGAGTGAGGCG +
Preference number: 2 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGQPGVE*DGGSEA
Trigger: CGCCTCACTCCCTCCGTCCCACTCCACTCCAGGCTG...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGTGCGTAACAGCGTCTTaGTCCCTCAGATGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLCVTAS*SLRWAW
Trigger: CCAGGCCCATCTGAGGGACCAAGACGCTGTTACGCA...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCAAGAGGACAGAGGAATaGTTAGGCCAAGAGCCTTGC +
Preference number: 2 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPKRTEE*LGQEPC
Trigger: GCAAGGCTCTTGGCCTAACCATTCCTCTGTCCTCTT...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAACTCTGACCCAGGTTTaGAGACATGGAAGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQTLTQV*RHGRAA
Trigger: GGCAGCCCTTCCATGTCTCCAAACCTGGGTCAGAGT...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTCCCCAAGGTGCAGATTaGCAGCTTCCCACCTTTCCA +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTPQGAD*QLPTFP
Trigger: TGGAAAGGTGGGAAGCTGGCAATCTGCACCTTGGGG...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGGGAGTGAGGCGGGGTaGAAGGGTCAGGAGACATCC +
Preference number: 2 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGGSEAG*KGQETS
Trigger: GGATGTCTCCTGACCCTTCCACCCCGCCTCACTCCC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTCCCTGGAAACCTCCATaGGGGAGGAGGGTGACCGTT +
Preference number: 2 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAPWKPP*GRRVTV
Trigger: AACGGTCACCCTCCTCCCCCATGGAGGTTTCCAGGG...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTCCCTGGAAACCTCCATaGGGGAGGAGGGTGACCGTT +
Preference number: 2 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFPWKPP*GRRVTV
Trigger: AACGGTCACCCTCCTCCCCCATGGAGGTTTCCAGGG...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGTCCCTCAGATGGGCCTaGGGCTGGGAGGGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKSLRWA*GWEGWH
Trigger: GTGCCAGCCCTCCCAGCCCCAGGCCCATCTGAGGGA...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTTGCGTAACAGCGTCTTaGTCCCTCAGATGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSCVTAS*SLRWAW
Trigger: CCAGGCCCATCTGAGGGACCAAGACGCTGTTACGCA...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTCAAGGCTTGGCCTCATaGAGGCTGATGTGGAACCCA +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTQGLAS*RLMWNP
Trigger: TGGGTTCCACATCAGCCTCCATGAGGCCAAGCCTTG...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGAAGAGGACAGAGGAATaGTTAGGCCAAGAGCCTTGC +
Preference number: 2 (lower is better)
Translates to: TKHITRRAPPGRARAASWKRTEE*LGQEPC
Trigger: GCAAGGCTCTTGGCCTAACCATTCCTCTGTCCTCTT...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTGGGAGAATGTTGTTCTaGGGGCCGTGGGGACAAGGA +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSGRMLF*GPWGQG
Trigger: TCCTTGTCCCCACGGCCCCCAGAACAACATTCTCCC...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTAGCTCCCCGCCCTCATaGGGTTTTGTCCAACCCTGG +
Preference number: 2 (lower is better)
Translates to: WRERLLHWSWEDCRLPKASSPPS*GFVQPW
Trigger: CCAGGGTTGGACAAAACCCCATGAGGGCGGGGAGCT...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTGAAACAGGGCTGGGCTaGCTCTCTCTCTTTACCTGG +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTETGLG*LSLFTW
Trigger: CCAGGTAAAGAGAGAGAGCCAGCCCAGCCCTGTTTC...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATCCCGGGCTGAGGGCCTaGATGCCCTTCATTCACCCT +
Preference number: 2 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHPGLRA*MPFIHP
Trigger: AGGGTGAATGAAGGGCATGCAGGCCCTCAGCCCGGG...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTCTGGAAAGAAGGGCCTaGGTAACAGCGTCTTGGTCC +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSLERRA*VTASWS
Trigger: GGACCAAGACGCTGTTACGCAGGCCCTTCTTTCCAG...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTTACTGTTGCTGGCTTTaGCGTAGGTTTGGGGGTCCC +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSYCCWL*RRFGGP
Trigger: GGGACCCCCAAACCTACGGCAAAGCCAGCAACAGTA...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGGCAGGCTGCTACTGTTaGTGGCTTTGCCGTAGGTTT +
Preference number: 2 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLAGCYC*WLCRRF
Trigger: AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGC...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTGACTTCTCAGCTCCTTaGCCCAGAGGTCCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSDFSAP*PRGPQE
Trigger: CTCTTGGGGACCTCTGGGGCAAGGAGCTGAGAAGTC...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTTGTCAGGACCCTCTGTaGCCACATGAAGAAGGTCAG +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTCQDPL*PHEEGQ
Trigger: CTGACCTTCTTCATGTGGGCACAGAGGGTCCTGACA...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTGCTCAGGAGACTCTTTaGTGGAACCCGAAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTAQETL*WNPKSR
Trigger: TCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGC...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTTTGAGAGCAGGGTGGTaGAGGAAGGGAAGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: WRERLLHWSWEDCRLPKALRAGW*RKGSRA
Trigger: TGCCCTGCTTCCCTTCCTCCACCACCCTGCTCTCAA...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGTCTTGGTCCCTCAGATaGGCCTGGGGCTGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKSWSLR*AWGWEG
Trigger: GCCCTCCCAGCCCCAGGCCCATCTGAGGGACCAAGA...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCAACCCAGTGATTTTATaGTTTTTGGATGGACATGGA +
Preference number: 2 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPNPVIL*FLDGHG
Trigger: TCCATGTCCATCCAAAAACCATAAAATCACTGGGTT...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTACTCTGACCCAGGTTTaGAGACATGGAAGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSTLTQV*RHGRAA
Trigger: GGCAGCCCTTCCATGTCTCCAAACCTGGGTCAGAGT...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATCTAGGAGTAGAAGGGTaGTCCCCGGGGCAGAGTGGA +
Preference number: 2 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHLGVEG*SPGQSG
Trigger: TCCACTCTGCCCCGGGGAGCACCCTTCTACTCCTAG...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGCCCGGGCTGAGGGCCTaGATGCCCTTCATTCACCCT +
Preference number: 2 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKPGLRA*MPFIHP
Trigger: AGGGTGAATGAAGGGCATGCAGGCCCTCAGCCCGGG...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTGCAAGTCTCACCTGGTaGTGCAGGACTTCTCAGCTC +
Preference number: 2 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAASLTW*CRTSQL
Trigger: GAGCTGAGAAGTCCTGCAGCACCAGGTGAGACTTGC...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGGACTGTTACCTACCCTaGGGCCACCCCAAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKDCYLP*GHPKPQ
Trigger: CTGGGGCTTGGGGTGGCCCCAGGGTAGGTAACAGTC...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATCGGTCCCAAGGGACGTaGCTAGGAGTAGAAGGGTGC +
Preference number: 2 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHRSQGT*LGVEGC
Trigger: GCACCCTTCTACTCCTAGCCACGTCCCTTGGGACCG...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCTCCTCCCCAGCAAATaGGAGCAGGCTGCTACTGTT +
Preference number: 2 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSLLPSK*EQAATV
Trigger: AACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGGAG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGGGAGAATGTTGTTCTaGGGGCCGTGGGGACAAGGA +
Preference number: 2 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGGRMLF*GPWGQG
Trigger: TCCTTGTCCCCACGGCCCCCAGAACAACATTCTCCC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTGAGGGGAAACAGGGCTaGGCTGGCTCTCTCTCTTTA +
Preference number: 2 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAEGKQG*AGSLSL
Trigger: TAAAGAGAGAGAGCCAGCCCAGCCCTGTTTCCCCTC...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTAAGGTCCTTTCACTCTaGCCCAGGTTTGGAGACATG +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSKVLSL*PRFGDM
Trigger: CATGTCTCCAAACCTGGGTCAGAGTGAAAGGACCTT...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGACTGGAAAGAAGGGCCTaGGTAACAGCGTCTTGGTCC +
Preference number: 2 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGLERRA*VTASWS
Trigger: GGACCAAGACGCTGTTACGCAGGCCCTTCTTTCCAG...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTGCAGGCTGCTACTGTTaGTGGCTTTGCCGTAGGTTT +
Preference number: 2 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSAGCYC*WLCRRF
Trigger: AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGC...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGGGGAGGGGCGGCAGTaGGGAGGAGTGACGGGAGTA +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVGEGRQ*GGVTGV
Trigger: TACTCCCGTCACTCCTCCCCACTGCCGCCCCTCCCC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGACCCCAGCCTCCAGGTaGCCCTGCAAATGCTCTGTC +
Preference number: 2 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKTPASR*PCKCSV
Trigger: GACAGAGCATTTGCAGGGCCACCTGGAGGCTGGGGT...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTGCTCAGGAGACTCTTTaGTGGAACCCGAAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAAQETL*WNPKSR
Trigger: TCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGC...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTCAGGTGCCGGCAGCCTaGAGTGGAGTGGGACGGAGG +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVQVPAA*SGVGRR
Trigger: CCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTG...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATAACCAGGCCAGGGAATaGGGCAGGTGCCGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: GLASWRLMWNPVILWFLDNQARE*GRCRQP
Trigger: AGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGCGGTCCCAAGGGACGTaGCTAGGAGTAGAAGGGTGC +
Preference number: 2 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKRSQGT*LGVEGC
Trigger: GCACCCTTCTACTCCTAGCCACGTCCCTTGGGACCG...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTCCCTCAGATGGGCCTaGGGCTGGGAGGGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: YTIMYKTGALLRPQHFSESLRWA*GWEGWH
Trigger: GTGCCAGCCCTCCCAGCCCCAGGCCCATCTGAGGGA...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCATGGGGGAGGAGGGTaGCCGTTCCTCCTCCAGTCC +
Preference number: 2 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEHGGGG*PFLLQS
Trigger: GGACTGGAGGAGGAACGGTCACCCTCCTCCCCCATG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGGGGTTTGGATCTGCTaGAGAGCCGATGCTGAAAGT +
Preference number: 2 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGGVWIC*RADAES
Trigger: ACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTAAGGTCCTTTCACTCTaGCCCAGGTTTGGAGACATG +
Preference number: 2 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSKVLSL*PRFGDM
Trigger: CATGTCTCCAAACCTGGGTCAGAGTGAAAGGACCTT...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGATTAGGCCAAGAGCCTTaGAGGTACAAGGCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGLGQEP*RYKAWP
Trigger: AGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAA...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTCAGGAGACTCTTTGGTaGAACCCGAAGAGCAGATGT +
Preference number: 2 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAQETLW*NPKSRC
Trigger: ACATCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTG...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTTCATGGAGGCTGATGTaGAACCCAGTGATTTTATGG +
Preference number: 2 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTSWRLM*NPVILW
Trigger: CCATAAAATCACTGGGTTCCACATCAGCCTCCATGA...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGTCATGGAGGCTGATGTaGAACCCAGTGATTTTATGG +
Preference number: 2 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLSWRLM*NPVILW
Trigger: CCATAAAATCACTGGGTTCCACATCAGCCTCCATGA...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTACAGGAGGAGGCCGTaGGCATGGCAAGGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEYRRRP*AWQGAW
Trigger: CCACGCCCCTTGCCATGCCCACGGCCTCCTCCTGTA...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATACCCCAGTGACACCATaGCTTCCTCCAGCTCACCCC +
Preference number: 2 (lower is better)
Translates to: GLASWRLMWNPVILWFLDTPVTP*LPPAHP
Trigger: GGGGTGAGCTGGAGGAAGTCATGGTGTCACTGGGGT...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGGGAGTGAGGCGGGGTaGAAGGGTCAGGAGACATCC +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVGSEAG*KGQETS
Trigger: GGATGTCTCCTGACCCTTCCACCCCGCCTCACTCCC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTTTTATGGTTTTTGGATaGACATGGAGGGAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSFMVFG*TWRESG
Trigger: CCCACTCTCCCTCCATGTCCATCCAAAAACCATAAA...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCCTGATGTCTCAGGCTaGAGGCACCCGTGCGGCCTT +
Preference number: 2 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEPDVSG*RHPCGL
Trigger: AAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCCCAACCCCAACTCCTaGCTGGGGAAAGGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEPNPNS*LGKGWR
Trigger: TCTCCAGCCTTTCCCCAGGCAGGAGTTGGGGTTGGG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTTCACCAACCAGCAGGTaGGCCCTTTGCTCCCACCCA +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVSPTSR*ALCSHP
Trigger: TGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGA...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTAGCTCCCCGCCCTCATaGGGTTTTGTCCAACCCTGG +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVSSPPS*GFVQPW
Trigger: CCAGGGTTGGACAAAACCCCATGAGGGCGGGGAGCT...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGACTTCTCAGCTCCTTaGCCCAGAGGTCCCCAAGAG +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVDFSAP*PRGPQE
Trigger: CTCTTGGGGACCTCTGGGGCAAGGAGCTGAGAAGTC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTTTGAGAGCAGGGTGGTaGAGGAAGGGAAGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVLRAGW*RKGSRA
Trigger: TGCCCTGCTTCCCTTCCTCCACCACCCTGCTCTCAA...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATGGCTGCTACTGTTGCTaGCTTTGCCGTAGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: GLASWRLMWNPVILWFLDGCYCC*LCRRFG
Trigger: CCCAAACCTACGGCAAAGCCAGCAACAGTAGCAGCC...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGAACCCAGTGATTTTATaGTTTTTGGATGGACATGGA +
Preference number: 2 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLNPVIL*FLDGHG
Trigger: TCCATGTCCATCCAAAAACCATAAAATCACTGGGTT...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGATCATGGAGGCTGATGTaGAACCCAGTGATTTTATGG +
Preference number: 2 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGSWRLM*NPVILW
Trigger: CCATAAAATCACTGGGTTCCACATCAGCCTCCATGA...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCTCTCTCTCTTTACCTaGAGGCCCAGGAGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: YTIMYKTGALLRPQHFSELSLFT*RPRRPG
Trigger: ACCTGGCCTCCTGGGCCTCCAGGTAAAGAGAGAGAG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGACCCCAACTCCTGCCTaGGGAAAGGCTGGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: YTIMYKTGALLRPQHFSETPTPA*GKAGER
Trigger: TCTCTCTCCAGCCTTTCCCCAGGCAGGAGTTGGGGT...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTCTGCTGAACTCAGCTaGAGGCTCTCCCCTGATGTC +
Preference number: 2 (lower is better)
Translates to: YTIMYKTGALLRPQHFSESAELS*RLSPDV
Trigger: GACATCAGGGGAGAGCCTGCAGCTGAGTTCAGCAGA...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGGCTGCTACTGTTGCTaGCTTTGCCGTAGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVGCYCC*LCRRFG
Trigger: CCCAAACCTACGGCAAAGCCAGCAACAGTAGCAGCC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTCTCCTCCCCAGCAAATaGGAGCAGGCTGCTACTGTT +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVLLPSK*EQAATV
Trigger: AACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGGAG...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATTTTATGGTTTTTGGATaGACATGGAGGGAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHFMVFG*TWRESG
Trigger: CCCACTCTCCCTCCATGTCCATCCAAAAACCATAAA...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGGAGGGGAAACAGGGCTaGGCTGGCTCTCTCTCTTTA +
Preference number: 2 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEEGKQG*AGSLSL
Trigger: TAAAGAGAGAGAGCCAGCCCAGCCCTGTTTCCCCTC...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGGGGTTTGGATCTGCTaGAGAGCCGATGCTGAAAGT +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVGVWIC*RADAES
Trigger: ACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR TCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGATTCCTCCTTTCTGCTaGACTCAGCTGCAGGCTCTC +
Preference number: 2 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEIPPFC*TQLQAL
Trigger: GAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAAT...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR GCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTTTAGGCCAAGAGCCTTaGAGGTACAAGGCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVLGQEP*RYKAWP
Trigger: AGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAA...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGGCTCAGGAGACTCTTTaGTGGAACCCGAAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEAQETL*WNPKSR
Trigger: TCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGC...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTCAGGAGACTCTTTGGTaGAACCCGAAGAGCAGATGT +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVQETLW*NPKSRC
Trigger: ACATCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTG...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAAACCCAGTGATTTTATaGTTTTTGGATGGACATGGA +
Preference number: 2 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGNPVIL*FLDGHG
Trigger: TCCATGTCCATCCAAAAACCATAAAATCACTGGGTT...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATAACCCAGTGATTTTATaGTTTTTGGATGGACATGGA +
Preference number: 2 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHNPVIL*FLDGHG
Trigger: TCCATGTCCATCCAAAAACCATAAAATCACTGGGTT...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTATCGGAAAATATGTCTaGAACTCTATGGCGAGGGGA +
Preference number: 2 (lower is better)
Translates to: HNHVQNRCIAETTALLGVIGKYV*NSMARG
Trigger: TCCCCTCGCCATAGAGTTCCAGACATATTTTCCGAT...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR GCA 72 bp GAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGTaGAGGCAGGAGCTACAGGAGGAGGCCGTGGGCATG +
Preference number: 3 (lower is better)
Translates to: EPHQGGPVQHRG*RQELQEEAVGM
Trigger: CATGCCCACGGCCTCCTCCTGTAGCTCCTGCCTGCACCCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR GCA 72 bp AGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTaGGGCCTTCACGGGCTCCCCAGGCAGGCCAGAGAA +
Preference number: 3 (lower is better)
Translates to: RLSPDVSGWRHP*GLHGLPRQARE
Trigger: TTCTCTGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR GCA 72 bp ACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTaGAGCATCGTGGGTGCAGGCAGGAGCTACAGGAGG +
Preference number: 3 (lower is better)
Translates to: THYSPSPTRAGP*SIVGAGRSYRR
Trigger: CCTCCTGTAGCTCCTGCCTGCACCCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGTTAGGCCAAGAGCCTaGCAGGTACAAGGCTTGGCC +
Preference number: 3 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPVRPRA*QVQGLA
Trigger: GGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAAC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 72 bp CCGTTCCTCCTCCAGTCCCACCGGTCCCAAGGGACGTaGCTAGGAGTAGAAGGGTGCTCCCCGGGGCAGAGT +
Preference number: 3 (lower is better)
Translates to: PFLLQSHRSQGT*LGVEGCSPGQS
Trigger: ACTCTGCCCCGGGGAGCACCCTTCTACTCCTAGCCACGTCCCTTGGGACCGGTGGGACTGGAGGAGGAACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 72 bp AGCTACAGGAGGAGGCCGTGGGCATGGCAAGGGGCGTaGCCCCCACACTCGGTGTTGAGTGCCCTGACACCA +
Preference number: 3 (lower is better)
Translates to: SYRRRPWAWQGA*PPHSVLSALTP
Trigger: TGGTGTCAGGGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCTCCTGTAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCAAGAAGGTCAGAGCCTaGAGGCTGGGGTCTACTACC +
Preference number: 3 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPKKVRA*RLGSTT
Trigger: GGTAGTAGACCCCAGCCTCAAGGCTCTGACCTTCTT...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCTGCGTAACAGCGTCTaGGTCCCTCAGATGGGCCTG +
Preference number: 3 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPLRNSV*VPQMGL
Trigger: CAGGCCCATCTGAGGGACCAAGACGCTGTTACGCAG...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCACAGGTCCTCTGCAAGTaGCTGAGGGGGTTTGGATCT +
Preference number: 3 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPQVLCK*LRGFGS
Trigger: AGATCCAAACCCCCTCAGCAACTTGCAGAGGACCTG...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCGGCTCAGGAGACTCTTaGGTGGAACCCGAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPGSGDS*VEPEEQ
Trigger: CTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGCC...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGTTAGGCCAAGAGCCTaGCAGGTACAAGGCTTGGCC +
Preference number: 3 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHVRPRA*QVQGLA
Trigger: GGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAAC...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGCCAGCAGGGAGAATGTaGTTCTGGGGGCCGTGGGGA +
Preference number: 3 (lower is better)
Translates to: AAEARRPDSDKEGGADGRPAGRM*FWGPWG
Trigger: TCCCCACGGCCCCCAGAACAACATTCTCCCTGCTGG...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGGGACTTCTCAGCTCCTaGCCCCAGAGGTCCCCAAGA +
Preference number: 3 (lower is better)
Translates to: AAEARRPDSDKEGGADGRGLLSS*PQRSPR
Trigger: TCTTGGGGACCTCTGGGGCAAGGAGCTGAGAAGTCC...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR GCA 72 bp CAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTaGCGTAGGTTTGGGGGTCCCCACCCTAGGCCAGGG +
Preference number: 3 (lower is better)
Translates to: QQMGAGCYCCWL*RRFGGPHPRPG
Trigger: CCCTGGCCTAGGGTGGGGACCCCCAAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR GCA 72 bp CCAGCTCAGGCCCTGCCAGAGTGTCAGGACCCTCTGTaGCCACATGAAGAAGGTCAGAGCCTTGAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: PAQALPECQDPL*PHEEGQSLEAG
Trigger: CCCAGCCTCAAGGCTCTGACCTTCTTCATGTGGGCACAGAGGGTCCTGACACTCTGGCAGGGCCTGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAGGCTCAGGAGACTCTTaGGTGGAACCCGAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQGSGDS*VEPEEQ
Trigger: CTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGCC...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTCCAGCAGGGAGAATGTaGTTCTGGGGGCCGTGGGGA +
Preference number: 3 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSPAGRM*FWGPWG
Trigger: TCCCCACGGCCCCCAGAACAACATTCTCCCTGCTGG...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTGGCTCAGGAGACTCTTaGGTGGAACCCGAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTGSGDS*VEPEEQ
Trigger: CTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGCC...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAACAGGTCCTCTGCAAGTaGCTGAGGGGGTTTGGATCT +
Preference number: 3 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQQVLCK*LRGFGS
Trigger: AGATCCAAACCCCCTCAGCAACTTGCAGAGGACCTG...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR TCA 72 bp GAGGACTGCAGGCTTCCAAAAGCTTGCTTCAGGCTCTaGGGAGCCCAGGACACACCTCAGGCTGCAGCCGAA +
Preference number: 3 (lower is better)
Translates to: EDCRLPKACFRL*GAQDTPQAAAE
Trigger: TTCGGCTGCAGCCTGAGGTGTGTCCTGGGCTCCTCAGAGCCTGAAGCAAGCTTTTGGAAGCCTGCAGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTCAGGTCCTCTGCAAGTaGCTGAGGGGGTTTGGATCT +
Preference number: 3 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTQVLCK*LRGFGS
Trigger: AGATCCAAACCCCCTCAGCAACTTGCAGAGGACCTG...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGACCAGCAGGGAGAATGTaGTTCTGGGGGCCGTGGGGA +
Preference number: 3 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGPAGRM*FWGPWG
Trigger: TCCCCACGGCCCCCAGAACAACATTCTCCCTGCTGG...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTCGCCCTCATGGGGTTTaGTCCAACCCTGGTCTGCTT +
Preference number: 3 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSRPHGV*SNPGLL
Trigger: AAGCAGACCAGGGTTGGACAAAACCCCATGAGGGCG...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTCAGGCTTCCAAAAGCTaGCTTCAGGCTCTGAGGAGC +
Preference number: 3 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTQASKS*LQALRS
Trigger: GCTCCTCAGAGCCTGAAGCAAGCTTTTGGAAGCCTG...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTAAGAAGGTCAGAGCCTaGAGGCTGGGGTCTACTACC +
Preference number: 3 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSKKVRA*RLGSTT
Trigger: GGTAGTAGACCCCAGCCTCAAGGCTCTGACCTTCTT...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR TCA 72 bp CTTTGCTCCCACCCACCCCCAAAGGTCCTTTCACTCTaGCCCAGGTTTGGAGACATGGAAGGGCTGCCAGCA +
Preference number: 3 (lower is better)
Translates to: LCSHPPPKVLSL*PRFGDMEGLPA
Trigger: TGCTGGCAGCCCTTCCATGTCTCCAAACCTGGGTCAGAGTGAAAGGACCTTTGGGGGTGGGTGGGAGCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 72 bp GGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATaGTGGTTAACTGGGGACAAAACACATTACTCGCCG +
Preference number: 3 (lower is better)
Translates to: GSPGSLQNQAAE*WLTGDKTHYSP
Trigger: CGGCGAGTAATGTGTTTTGTCCCCAGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGGGCTCAGGAGACTCTTaGGTGGAACCCGAAGAGCAG +
Preference number: 3 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKGSGDS*VEPEEQ
Trigger: CTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGCC...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATCAGGTCCTCTGCAAGTaGCTGAGGGGGTTTGGATCT +
Preference number: 3 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHQVLCK*LRGFGS
Trigger: AGATCCAAACCCCCTCAGCAACTTGCAGAGGACCTG...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 72 bp AGGAGACATCCATCCCTCAGGGCTCAGGAGACTCTTTaGTGGAACCCGAAGAGCAGATGTTGTGATGTTGGG +
Preference number: 3 (lower is better)
Translates to: RRHPSLRAQETL*WNPKSRCCDVG
Trigger: CCCAACATCACAACATCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGCCCTGAGGGATGGATGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR TCA 72 bp GGTCCTCTGCAAGTTGCTGAGGGGGTTTGGATCTGCTaGAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAA +
Preference number: 3 (lower is better)
Translates to: GPLQVAEGVWIC*RADAESADSWK
Trigger: TTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCTCAGCAACTTGCAGAGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 72 bp AGACATCCATCCCTCAGGGCTCAGGAGACTCTTTGGTaGAACCCGAAGAGCAGATGTTGTGATGTTGGGCTA +
Preference number: 3 (lower is better)
Translates to: RHPSLRAQETLW*NPKSRCCDVGL
Trigger: TAGCCCAACATCACAACATCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGCCCTGAGGGATGGATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR-3UTR CAA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGGGACTTCTCAGCTCCTaGCCCCAGAGGTCCCCAAGA +
Preference number: 3 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEGLLSS*PQRSPR
Trigger: TCTTGGGGACCTCTGGGGCAAGGAGCTGAGAAGTCC...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
3UTR CCA 72 bp AGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATaGAGGCTGATGTGGAACCCAGTGATTTTATGGTTT +
Preference number: 3 (lower is better)
Translates to: RPRALQVQGLAS*RLMWNPVILWF
Trigger: AAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCACCAGGGCGGGCCCGTaGAGCATCGTGGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGTRAGP*SIVGAG
Trigger: GCCTGCACCCACGATGCTGCACGGGCCCGCCCTGGT...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGCAGACGGCGGGCGGTaGGGCAGCCCTGGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPADGGR*GSPGSL
Trigger: CAAGGAACCAGGGCTGCCCCACCGCCCGCCGTCTGC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCGGCTGCTCATGCACTaGGGGCAGGAGCTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGRLLMH*GQELRG
Trigger: TCCCCGGAGCTCCTGCCCCCAGTGCATGAGCAGCCG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCGGCTGGAGGCACCCGTaGGGCCTTCACGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPGWRHP*GLHGLP
Trigger: GGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCC...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCCCCAGCTCAGGCCCTaGCAGAGTGTCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGPQLRP*QSVRTL
Trigger: GAGGGTCCTGACACTCTGGCAGGGCCTGAGCTGGGG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGGCAGGAAGGAGGTCTaGCTGTCCCCGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPGRKEV*LSPGCH
Trigger: ATGGCACCCCGGGGACAGGCAGACCTCCTTCCTGCC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGCCACCGCGTCGCTCTaGGATCTCGCCGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHATASL*DLAGAA
Trigger: CGCAGCCCCGGCGAGATCCCAGAGCGACGCGGTGGC...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244458.7
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCGTAGCCGCAGGGGGATaGACAAGTGCGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGVAAGG*TSAELR
Trigger: CCGCAGCTCCGCACTTGTCCATCCCCCTGCGGCTAC...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCCGCCCCAGTGGCATTaGTCAGCGCCACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGPPQWH*SAPLPL
Trigger: CAGAGGGAGTGGCGCTGACCAATGCCACTGGGGCGG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCGGTTGGCGCCCCCGTTaGTCTCACTGCCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGGWRPR*SHCPQR
Trigger: CCTTTGGGGGCAGTGAGACCAACGGGGGCGCCAACC...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCAGCCTGGAGTGGAGTaGGACGGAGGGAGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGQPGVE*DGGSEA
Trigger: CGCCTCACTCCCTCCGTCCCACTCCACTCCAGGCTG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGCAGGTGCCGGCAGCCTaGAGTGGAGTGGGACGGAGG +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVQVPAA*SGVGRR
Trigger: CCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTG...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCTCTTGGTCCCTCAGATaGGCCTGGGGCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGSWSLR*AWGWEG
Trigger: GCCCTCCCAGCCCCAGGCCCATCTGAGGGACCAAGA...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAAGGCTGGAGTCCAGCTaGGGCTGCAGCCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPRLESS*GCSPSQ
Trigger: CTGGGAGGGGCTGCAGCCCCAGCTGGACTCCAGCCT...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGAGGCTGGAGTCCAGCTaGGGCTGCAGCCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVRLESS*GCSPSQ
Trigger: CTGGGAGGGGCTGCAGCCCCAGCTGGACTCCAGCCT...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGAGACCCTCCCGCTCTaGGGCCCTGAGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGETLPL*GPEDLG
Trigger: CCCCAGGTCCTCAGGGCCCCAGAGCGGGAGGGTCTC...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCTCCTCTGGCGCCAGTaGGGCCTCATCGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGLLWRQ*GLIVGA
Trigger: AGCTCCTACGATGAGGCCTCACTGGCGCCAGAGGAG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGTGGGCCTTTCTCGATaGGCTGGCGCCAACGCTTGG +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPVGLSR*AGANAW
Trigger: CCAAGCGTTGGCGCCAGCTCATCGAGAAAGGCCCAC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGCCCACTCTCGTCGTCTaGCCACTCGGTGGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVPTLVV*PLGGVG
Trigger: CCCTACGCCACCGAGTGGTCAGACGACGAGAGTGGG...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCCATGGGGGAGGAGGGTaGCCGTTCCTCCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAHGGGG*PFLLQS
Trigger: GGACTGGAGGAGGAACGGTCACCCTCCTCCCCCATG...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAAGGCTCGGCTGCTCATaGACTGGGGGCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPRLGCS*TGGRSS
Trigger: GGAGCTCCTGCCCCCAGTGCATGAGCAGCCGAGCCT...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGTTAGCAGGCTCGGCTaGTCATGCACTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPVSRLG*SCTGGR
Trigger: CCTGCCCCCAGTGCATGAGCAGCCGAGCCTGCTAAC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCAGCAGGTGGGCCCTTTaGTCCCACCCACCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPSRWAL*SHPPPK
Trigger: CTTTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCT...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCGGACACACCTCAGGCTaGAGCCGAAGCTCGGAGACC +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGGHTSG*SRSSET
Trigger: GGTCTCCGAGCTTCGGCTGCAGCCTGAGGTGTGTCC...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAGGCCCTGGAGGTGGCTaGTCAGGACGGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPGPGGG*SGRRGF
Trigger: AAACCCCCTCCGTCCTGAGCAGCCACCTCCAGGGCC...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAGTAGCCGCAGGGGGATaGACAAGTGCGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPVAAGG*TSAELR
Trigger: CCGCAGCTCCGCACTTGTCCATCCCCCTGCGGCTAC...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCCCCAGAAGCTGTCGGTaGTCTCCTCTGGCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPPRSCR*SPLAPV
Trigger: CACTGGCGCCAGAGGAGACCACCGACAGCTTCTGGG...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCACTGGGGCCAGTTCATaGGCATGCCGGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSATGASS*ACRGHW
Trigger: CCAGTGGCCCCGGCATGCCCATGAACTGGCCCCAGT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAACTGGGGCCAGTTCATaGGCATGCCGGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPTGASS*ACRGHW
Trigger: CCAGTGGCCCCGGCATGCCCATGAACTGGCCCCAGT...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCACCGCCCCAGTGGCATTaGTCAGCGCCACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPPPQWH*SAPLPL
Trigger: CAGAGGGAGTGGCGCTGACCAATGCCACTGGGGCGG...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCCGTCTGACCACTCGGTaGCGTAGGGCTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPRLTTR*RRAGLC
Trigger: ACAGAGGCCAGCCCTACGCCACCGAGTGGTCAGACG...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAAACCAGGCCAGGGAATaGGGCAGGTGCCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPNQARE*GRCRQP
Trigger: AGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCCCTGATGTCTCAGGCTaGAGGCACCCGTGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPPDVSG*RHPCGL
Trigger: AAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGG...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCCTGATGTCTCAGGCTaGAGGCACCCGTGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGPDVSG*RHPCGL
Trigger: AAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAGCATGGCAAGGGGCGTaGCCCCCACACTCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPAWQGA*PPHSVL
Trigger: CAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGC...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCGCATGGCAAGGGGCGTaGCCCCCACACTCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAAWQGA*PPHSVL
Trigger: CAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGC...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGTACAGGAGGAGGCCGTaGGCATGGCAAGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVYRRRP*AWQGAW
Trigger: CCACGCCCCTTGCCATGCCCACGGCCTCCTCCTGTA...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCATACAGGAGGAGGCCGTaGGCATGGCAAGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPYRRRP*AWQGAW
Trigger: CCACGCCCCTTGCCATGCCCACGGCCTCCTCCTGTA...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAGCGGTGGGGCAGCCCTaGTTCCTTGCAGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPAVGQP*FLAEPG
Trigger: GCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCGC...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCGCAGACGGCGGGCGGTaGGGCAGCCCTGGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPADGGR*GSPGSL
Trigger: CAAGGAACCAGGGCTGCCCCACCGCCCGCCGTCTGC...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGCAGACGGCGGGCGGTaGGGCAGCCCTGGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHADGGR*GSPGSL
Trigger: CAAGGAACCAGGGCTGCCCCACCGCCCGCCGTCTGC...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAGTGGGCCTTTCTCGATaGGCTGGCGCCAACGCTTGG +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPVGLSR*AGANAW
Trigger: CCAAGCGTTGGCGCCAGCTCATCGAGAAAGGCCCAC...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGACCCACTCTCGTCGTCTaGCCACTCGGTGGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGPTLVV*PLGGVG
Trigger: CCCTACGCCACCGAGTGGTCAGACGACGAGAGTGGG...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGACATGGGGGAGGAGGGTaGCCGTTCCTCCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGHGGGG*PFLLQS
Trigger: GGACTGGAGGAGGAACGGTCACCCTCCTCCCCCATG...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACTGGCACAGCCCGGGCTaGGGGCCTGCATGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHWHSPG*GPACPS
Trigger: TGAAGGGCATGCAGGCCCTCAGCCCGGGCTGTGCCA...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCGGTGGCCGTCATCGATaGGCTTCACGGTCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGGGRHR*ASRSAC
Trigger: ACAAGCGGACCGTGAAGCGCATCGATGACGGCCACC...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGCCAGTTCATGGGCATaGCGGGGCCACTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGASSWA*RGHWCC
Trigger: GCAGCACCAGTGGCCCCGGCATGCCCATGAACTGGC...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGCCCGGGCTGAGGGCCTaGATGCCCTTCATTCACCCT +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVPGLRA*MPFIHP
Trigger: AGGGTGAATGAAGGGCATGCAGGCCCTCAGCCCGGG...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGCAGGAAGGAGGTCTaGCTGTCCCCGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGGRKEV*LSPGCH
Trigger: ATGGCACCCCGGGGACAGGCAGACCTCCTTCCTGCC...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGTGCAGCATCGTGGGTaGAGGCAGGAGCTACAGGAG +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPVQHRG*RQELQE
Trigger: CTCCTGTAGCTCCTGCCTGCACCCACGATGCTGCAC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGGCGAAGCGGGACGTCTaGGGCCCGGCCTCAAGCCCG +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRAKRDV*GPASSP
Trigger: CGGGCTTGAGGCCGGGCCCCAGACGTCCCGCTTCGC...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCCGTAGGAGCTGGACATaGTGTAGCCGCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPRRSWT*CSRRGM
Trigger: CATCCCCCTGCGGCTACACCATGTCCAGCTCCTACG...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCACGCCTTCTCGATCTTaGCGCGCTCCTGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGTPSRS*RAPARS
Trigger: ACTGCGTGCAGGAGCGCGCCAAGATCGAGAAGGCGT...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCTGCCTCTGTCATTATaGCACCCCAGGCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGLPLSL*HPRPAP
Trigger: TGGAGCGGGCCTGGGGTGCCATAATGACAGAGGCAG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCACTCTACCGCCCCAGTaGCATTGGTCAGCGCCACTC +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGTLPPQ*HWSAPL
Trigger: GAGTGGCGCTGACCAATGCCACTGGGGCGGTAGAGT...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACCCGCGGTCCCCAGCCTaGGATGTGGACTCTACCGCC +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHPRSPA*DVDSTA
Trigger: GGCGGTAGAGTCCACATCCCAGGCTGGGGACCGCGG...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCACGTCCTCAAAGGGGTTaGCGCCCCCGTTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPRPQRG*RPRWSH
Trigger: GTGAGACCAACGGGGGCGCCAACCCCTTTGAGGACG...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCCGTCCTCAAAGGGGTTaGCGCCCCCGTTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSARPQRG*RPRWSH
Trigger: GTGAGACCAACGGGGGCGCCAACCCCTTTGAGGACG...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGCACGCGCACTCCCTTaGAGTCGTCCTCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPARALP*SRPQRG
Trigger: ACCCCTTTGAGGACGACTCCAAGGGAGTGCGCGTGC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGGAGTGACGGGAGTATaGAGGGAGGGGGCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPGVTGV*REGASR
Trigger: TCTAGAGGCCCCCTCCCTCCATACTCCCGTCACTCC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCGGGGAGGGGCGGCAGTaGGGAGGAGTGACGGGAGTA +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPGEGRQ*GGVTGV
Trigger: TACTCCCGTCACTCCTCCCCACTGCCGCCCCTCCCC...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCGGGAGTGAGGCGGGGTaGAAGGGTCAGGAGACATCC +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAGSEAG*KGQETS
Trigger: GGATGTCTCCTGACCCTTCCACCCCGCCTCACTCCC...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCTCACCAACCAGCAGGTaGGCCCTTTGCTCCCACCCA +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPSPTSR*ALCSHP
Trigger: TGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGA...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGAGACCCTCCCGCTCTaGGGCCCTGAGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWETLPL*GPEDLG
Trigger: CCCCAGGTCCTCAGGGCCCCAGAGCGGGAGGGTCTC...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGCATGGCAAGGGGCGTaGCCCCCACACTCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGAWQGA*PPHSVL
Trigger: CAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGC...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGGCCCGTGCAGCATCGTaGGTGCAGGCAGGAGCTACA +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVARAAS*VQAGAT
Trigger: TGTAGCTCCTGCCTGCACCCACGATGCTGCACGGGC...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGTGGGCCTTTCTCGATaGGCTGGCGCCAACGCTTGG +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGVGLSR*AGANAW
Trigger: CCAAGCGTTGGCGCCAGCTCATCGAGAAAGGCCCAC...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACCCCACTCTCGTCGTCTaGCCACTCGGTGGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHPTLVV*PLGGVG
Trigger: CCCTACGCCACCGAGTGGTCAGACGACGAGAGTGGG...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGACCCCAGTGACACCATaGCTTCCTCCAGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVTPVTP*LPPAHP
Trigger: GGGGTGAGCTGGAGGAAGTCATGGTGTCACTGGGGT...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACAGGCTCGGCTGCTCATaGACTGGGGGCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHRLGCS*TGGRSS
Trigger: GGAGCTCCTGCCCCCAGTGCATGAGCAGCCGAGCCT...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000620693.4
CDS-3UTR GCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCATCTTGGCGCGCTCCTaGACGCAGTTCATCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGILARS*TQFIRS
Trigger: CGACCTGATGAACTGCGTGCAGGAGCGCGCCAAGAT...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGACCCGGGCTGAGGGCCTaGATGCCCTTCATTCACCCT +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGPGLRA*MPFIHP
Trigger: AGGGTGAATGAAGGGCATGCAGGCCCTCAGCCCGGG...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGACTTCTCAGCTCCTTaGCCCAGAGGTCCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPDFSAP*PRGPQE
Trigger: CTCTTGGGGACCTCTGGGGCAAGGAGCTGAGAAGTC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGGTGCAGCATCGTGGGTaGAGGCAGGAGCTACAGGAG +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVVQHRG*RQELQE
Trigger: CTCCTGTAGCTCCTGCCTGCACCCACGATGCTGCAC...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGACCAGGGCGGGCCCGTaGAGCATCGTGGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRTRAGP*SIVGAG
Trigger: GCCTGCACCCACGATGCTGCACGGGCCCGCCCTGGT...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGGGAGAGGGGGCCTGCTaGCGGGCTGGGGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLGEGAC*RAGGSV
Trigger: GACAGAGCCCCCAGCCCGGCAGCAGGCCCCCTCTCC...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000538621.2
CDS-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCCGTAGGAGCTGGACATaGTGTAGCCGCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSARRSWT*CSRRGM
Trigger: CATCCCCCTGCGGCTACACCATGTCCAGCTCCTACG...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGCTGCCTCTGTCATTATaGCACCCCAGGCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVLPLSL*HPRPAP
Trigger: TGGAGCGGGCCTGGGGTGCCATAATGACAGAGGCAG...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAACTCTACCGCCCCAGTaGCATTGGTCAGCGCCACTC +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPTLPPQ*HWSAPL
Trigger: GAGTGGCGCTGACCAATGCCACTGGGGCGGTAGAGT...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACCCCCAGCCTGGGATGTaGACTCTACCGCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHPQPGM*TLPPQW
Trigger: CCACTGGGGCGGTAGAGTCCACATCCCAGGCTGGGG...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCACCCCAGCCTCCAGGTaGCCCTGCAAATGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSATPASR*PCKCSV
Trigger: GACAGAGCATTTGCAGGGCCACCTGGAGGCTGGGGT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAACCCCAGCCTCCAGGTaGCCCTGCAAATGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPTPASR*PCKCSV
Trigger: GACAGAGCATTTGCAGGGCCACCTGGAGGCTGGGGT...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGCAGGTGCCGGCAGCCTaGAGTGGAGTGGGACGGAGG +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWQVPAA*SGVGRR
Trigger: CCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTG...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGCCCTGGAAACCTCCATaGGGGAGGAGGGTGACCGTT +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVPWKPP*GRRVTV
Trigger: AACGGTCACCCTCCTCCCCCATGGAGGTTTCCAGGG...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACTCTTGGTCCCTCAGATaGGCCTGGGGCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHSWSLR*AWGWEG
Trigger: GCCCTCCCAGCCCCAGGCCCATCTGAGGGACCAAGA...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCGGGAGAATGTTGTTCTaGGGGCCGTGGGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGGRMLF*GPWGQG
Trigger: TCCTTGTCCCCACGGCCCCCAGAACAACATTCTCCC...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGTCACCAACCAGCAGGTaGGCCCTTTGCTCCCACCCA +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVSPTSR*ALCSHP
Trigger: TGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGA...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGGTTTTGTCCAACCCTaGTCTGCTTCCCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPGFVQP*SASQAP
Trigger: GGGGGCTTGGGAAGCAGACCAGGGTTGGACAAAACC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCTTCTGCACTGGAGCTaGGAGGACTGCAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGLLHWS*EDCRLP
Trigger: TGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGCCTTCTCCTCCGTGGTaGCGGGCGGAGAGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRPSPPW*RAERGP
Trigger: AGGCCCCCTCTCCGCCCGCCACCACGGAGGAGAAGG...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538621.2
CDS-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAGCTTACTGCCCCCGCTaGGCCAGGCCAGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQAYCPR*ARPGLE
Trigger: CTCCAGCCCTGGCCTGGCCCAGCGGGGGCAGTAAGC...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538621.2
3UTR CAA 72 bp TGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTaGAGTGCCCTGACACCAGCACTGGCAGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: WAWQGAWPPHSV*SALTPALAGRA
Trigger: AGCCCTACCTGCCAGTGCTGGTGTCAGGGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCACCAGCAGCACCTCCTTaGGGAAGACCAGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPPAAPP*GRPAAF
Trigger: AAAAGCGGCTGGTCTTCCTCAAGGAGGTGCTGCTGG...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGCTTGCTTCAGGCTCTaGGGAGCCCAGGACACACCT +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGACFRL*GAQDTP
Trigger: AGGTGTGTCCTGGGCTCCTCAGAGCCTGAAGCAAGC...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCCAGCGCCACTCCCTCTaGCTTCTTAGGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPQRHSL*LLRLFL
Trigger: GAGAAACAGCCTAAGAAGGCAGAGGGAGTGGCGCTG...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACAGCAGGTGGGCCCTTTaGTCCCACCCACCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHSRWAL*SHPPPK
Trigger: CTTTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCT...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAGCACTCCGGCACCACTaGTTTCACCAACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPALRHH*FHQPAG
Trigger: ACCTGCTGGTTGGTGAAAGCAGTGGTGCCGGAGTGC...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCGCACTCCGGCACCACTaGTTTCACCAACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAALRHH*FHQPAG
Trigger: ACCTGCTGGTTGGTGAAAGCAGTGGTGCCGGAGTGC...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGCAAGTCTCACCTGGTaGTGCAGGACTTCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPASLTW*CRTSQL
Trigger: GAGCTGAGAAGTCCTGCAGCACCAGGTGAGACTTGC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCTGGAGCTGGGAGGACTaGAGGCTTCCAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGWSWED*RLPKAC
Trigger: GCAAGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCA...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGACCCAACCCCAACTCCTaGCTGGGGAAAGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGPNPNS*LGKGWR
Trigger: TCTCCAGCCTTTCCCCAGGCAGGAGTTGGGGTTGGG...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCCCCAAGGTGCAGATTaGCAGCTTCCCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGPQGAD*QLPTFP
Trigger: TGGAAAGGTGGGAAGCTGGCAATCTGCACCTTGGGG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGGAGTCCAGCTGGGGCTaGAGCCCCTCCCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRESSWG*SPSQVL
Trigger: CAGCACCTGGGAGGGGCTGCAGCCCCAGCTGGACTC...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGACACTCGGTGTTGAGTaGCCTGACACCAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVTLGVE*PDTSTG
Trigger: GCCAGTGCTGGTGTCAGGGCACTCAACACCGAGTGT...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGTAGCCGCAGGGGGATaGACAAGTGCGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWVAAGG*TSAELR
Trigger: CCGCAGCTCCGCACTTGTCCATCCCCCTGCGGCTAC...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACCCCAGAAGCTGTCGGTaGTCTCCTCTGGCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHPRSCR*SPLAPV
Trigger: CACTGGCGCCAGAGGAGACCACCGACAGCTTCTGGG...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGCCGCGGTCCCCAGCCTaGGATGTGGACTCTACCGCC +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRPRSPA*DVDSTA
Trigger: GGCGGTAGAGTCCACATCCCAGGCTGGGGACCGCGG...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGGGGGAGGGGCGGCAGTaGGGAGGAGTGACGGGAGTA +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRGEGRQ*GGVTGV
Trigger: TACTCCCGTCACTCCTCCCCACTGCCGCCCCTCCCC...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGACTGTTACCTACCCTaGGGCCACCCCAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHDCYLP*GHPKPQ
Trigger: CTGGGGCTTGGGGTGGCCCCAGGGTAGGTAACAGTC...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGAGTGAGGCGGGGTaGAAGGGTCAGGAGACATCC +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHGSEAG*KGQETS
Trigger: GGATGTCTCCTGACCCTTCCACCCCGCCTCACTCCC...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGAACCAGGCCAGGGAATaGGGCAGGTGCCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWNQARE*GRCRQP
Trigger: AGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGGCTGCTACTGTTGCTaGCTTTGCCGTAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPGCYCC*LCRRFG
Trigger: CCCAAACCTACGGCAAAGCCAGCAACAGTAGCAGCC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAAGCTCCCCGCCCTCATaGGGTTTTGTCCAACCCTGG +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGSSPPS*GFVQPW
Trigger: CCAGGGTTGGACAAAACCCCATGAGGGCGGGGAGCT...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCACCCCAACTCCTGCCTaGGGAAAGGCTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSATPTPA*GKAGER
Trigger: TCTCTCTCCAGCCTTTCCCCAGGCAGGAGTTGGGGT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGGTGCTGGGAAGCCGCTaGCACAGAGAGGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRVLGSR*HREGEP
Trigger: GGGCTCCCCCTCTCTGTGCCAGCGGCTTCCCAGCAC...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGACAGGGCCCTGGAGGTaGCTGCTCAGGACGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRTGPWR*LLRTEG
Trigger: CCCCTCCGTCCTGAGCAGCCACCTCCAGGGCCCTGT...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGATGGGGACTGAGAGAGTaGTCCCAAACAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGWGLRE*SQTGPW
Trigger: CCAGGGCCCTGTTTGGGACCACTCTCTCAGTCCCCA...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGCGGTGGGGCAGCCCTaGTTCCTTGCAGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWAVGQP*FLAEPG
Trigger: GCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCGC...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGCGGCTGCTCATGCACTaGGCCCGTGTGGGCACCAAG +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWRLLMH*ARVGTK
Trigger: CTTGGTGCCCACACGGGCCCAGTGCATGAGCAGCCG...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538621.2
CDS-3UTR TCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCTTCTTGGTGGTGGTGTaGGGAAGGTCTGGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAFLVVV*GRSGFH
Trigger: GTGGAACCCAGACCTTCCTCACACCACCACCAAGAA...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGCATGGGGGAGGAGGGTaGCCGTTCCTCCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRHGGGG*PFLLQS
Trigger: GGACTGGAGGAGGAACGGTCACCCTCCTCCCCCATG...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCATTCCTCCTTTCTGCTaGACTCAGCTGCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGIPPFC*TQLQAL
Trigger: GAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAAT...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCAGGGGGATGGACAAGTaGGGAGCTGCGGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPRGMDK*GAAVSR
Trigger: CCTGCTAACCGCAGCTCCGCACTTGTCCATCCCCCT...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCTCGCTCACCTTGTCTaGCTCTGTCATTATGGCACC +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGLAHLV*LCHYGT
Trigger: GGTGCCATAATGACAGAGGCAGACAAGGTGAGCGAG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAAGGGGACAGGTCCTCTaGAAGTTGCTGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPRGQVL*KLLRGF
Trigger: AAACCCCCTCAGCAACTTGCAGAGGACCTGTCCCCT...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGAGGGGACAGGTCCTCTaGAAGTTGCTGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVRGQVL*KLLRGF
Trigger: AAACCCCCTCAGCAACTTGCAGAGGACCTGTCCCCT...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCTTAGGCCAAGAGCCTTaGAGGTACAAGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGLGQEP*RYKAWP
Trigger: AGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAA...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGTCTGCTGAACTCAGCTaGAGGCTCTCCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVSAELS*RLSPDV
Trigger: GACATCAGGGGAGAGCCTGCAGCTGAGTTCAGCAGA...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAGCAAGTCTCACCTGGTaGTGCAGGACTTCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPASLTW*CRTSQL
Trigger: GAGCTGAGAAGTCCTGCAGCACCAGGTGAGACTTGC...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGTGGAGCTGGGAGGACTaGAGGCTTCCAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVWSWED*RLPKAC
Trigger: GCAAGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCA...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCCCAACCCCAACTCCTaGCTGGGGAAAGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPPNPNS*LGKGWR
Trigger: TCTCCAGCCTTTCCCCAGGCAGGAGTTGGGGTTGGG...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGCCCCAAGGTGCAGATTaGCAGCTTCCCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVPQGAD*QLPTFP
Trigger: TGGAAAGGTGGGAAGCTGGCAATCTGCACCTTGGGG...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGGCAGCCCCTCCCAGGTaGTGGGAAGCCGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLAAPPR*WEAAGT
Trigger: TGTGCCAGCGGCTTCCCAGCACCTGGGAGGGGCTGC...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGTGCAGCATCGTGGGTaGAGGCAGGAGCTACAGGAG +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHVQHRG*RQELQE
Trigger: CTCCTGTAGCTCCTGCCTGCACCCACGATGCTGCAC...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGCAGCCCTGGTTCCTTaGAGAACCAGGCCGCAGAAT +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGAALVP*RTRPQN
Trigger: ATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGC...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGCCCAGAAGCTGTCGGTaGTCTCCTCTGGCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWPRSCR*SPLAPV
Trigger: CACTGGCGCCAGAGGAGACCACCGACAGCTTCTGGG...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCATCGTTGCATAGACGGTaGCCGTCATCGATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPSLHRR*PSSMRF
Trigger: GAAGCGCATCGATGACGGCCACCGTCTATGCAACGA...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGTCGTTGCATAGACGGTaGCCGTCATCGATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVSLHRR*PSSMRF
Trigger: GAAGCGCATCGATGACGGCCACCGTCTATGCAACGA...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACCCTTTCTCGATGAGCTaGCGCCAACGCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHPFSMS*RQRLAQ
Trigger: CTGGGCCAAGCGTTGGCGCCAGCTCATCGAGAAAGG...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCACAGGCTGCCATACTGTaGGCCTTTCTCGATGAGCTG +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPQAAIL*AFLDEL
Trigger: CAGCTCATCGAGAAAGGCCCACAGTATGGCAGCCTG...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCGGTGTGAGGAAGGTCTaGGTTCCACTCCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGGVRKV*VPLLKL
Trigger: CAGTTTGAGGAGTGGAACCCAGACCTTCCTCACACC...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGCCGCGGTCCCCAGCCTaGGATGTGGACTCTACCGCC +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLPRSPA*DVDSTA
Trigger: GGCGGTAGAGTCCACATCCCAGGCTGGGGACCGCGG...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGCGTCTGACCACTCGGTaGCGTAGGGCTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWRLTTR*RRAGLC
Trigger: ACAGAGGCCAGCCCTACGCCACCGAGTGGTCAGACG...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAGGTTGGCGCCCCCGTTaGTCTCACTGCCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQGWRPR*SHCPQR
Trigger: CCTTTGGGGGCAGTGAGACCAACGGGGGCGCCAACC...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGAGTGACGGGAGTATaGAGGGAGGGGGCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHGVTGV*REGASR
Trigger: TCTAGAGGCCCCCTCCCTCCATACTCCCGTCACTCC...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCACCCCAGCCTCCAGGTaGCCCTGCAAATGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPTPASR*PCKCSV
Trigger: GACAGAGCATTTGCAGGGCCACCTGGAGGCTGGGGT...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACCCCTGGAAACCTCCATaGGGGAGGAGGGTGACCGTT +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHPWKPP*GRRVTV
Trigger: AACGGTCACCCTCCTCCCCCATGGAGGTTTCCAGGG...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCACTCCTCCCCAGCAAATaGGAGCAGGCTGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPLLPSK*EQAATV
Trigger: AACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGGAG...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCACAAGGCTTGGCCTCATaGAGGCTGATGTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPQGLAS*RLMWNP
Trigger: TGGGTTCCACATCAGCCTCCATGAGGCCAAGCCTTG...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCGAAACAGGGCTGGGCTaGCTCTCTCTCTTTACCTGG +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAETGLG*LSLFTW
Trigger: CCAGGTAAAGAGAGAGAGCCAGCCCAGCCCTGTTTC...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGGAGGGGAAACAGGGCTaGGCTGGCTCTCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVEGKQG*AGSLSL
Trigger: TAAAGAGAGAGAGCCAGCCCAGCCCTGTTTCCCCTC...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTGTGCTGGGAAGCCGCTaGCACAGAGAGGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTVLGSR*HREGEP
Trigger: GGGCTCCCCCTCTCTGTGCCAGCGGCTTCCCAGCAC...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTAGGCTGGAGTCCAGCTaGGGCTGCAGCCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTRLESS*GCSPSQ
Trigger: CTGGGAGGGGCTGCAGCCCCAGCTGGACTCCAGCCT...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAGCATGGCAAGGGGCGTaGCCCCCACACTCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQAWQGA*PPHSVL
Trigger: CAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGC...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAACTCCTCTGGCGCCAGTaGGGCCTCATCGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQLLWRQ*GLIVGA
Trigger: AGCTCCTACGATGAGGCCTCACTGGCGCCAGAGGAG...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCCAGCAGCACCTCCTTaGGGAAGACCAGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPPAAPP*GRPAAF
Trigger: AAAAGCGGCTGGTCTTCCTCAAGGAGGTGCTGCTGG...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCTGCTGCGGAACCATCTaGGGTCTTCCTGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPCCGTI*GLPGHQ
Trigger: CTGATGCCCAGGAAGACCTCAGATGGTTCCGCAGCA...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAGGGGTTTGGATCTGCTaGAGAGCCGATGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPGVWIC*RADAES
Trigger: ACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCC...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGAAACAGGTGCATTGCTaGGACCACAGCACTTCTCGG +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVKQVHC*DHSTSR
Trigger: CCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTT...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCAAACAGGTGCATTGCTaGGACCACAGCACTTCTCGG +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAKQVHC*DHSTSR
Trigger: CCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCATCTTGGCGCGCTCCTaGACGCAGTTCATCAGGTCG +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPILARS*TQFIRS
Trigger: CGACCTGATGAACTGCGTGCAGGAGCGCGCCAAGAT...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGCTCGCTCACCTTGTCTaGCTCTGTCATTATGGCACC +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVLAHLV*LCHYGT
Trigger: GGTGCCATAATGACAGAGGCAGACAAGGTGAGCGAG...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCTCAGGTGTGACCGATTaGTCCGTCTTGCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGSGVTD*SVLLFI
Trigger: GATGAACAGCAAGACGGAGCAATCGGTCACACCTGA...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCTCAGGTGTGACCGATTaGTCCGTCTTGCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPSGVTD*SVLLFI
Trigger: GATGAACAGCAAGACGGAGCAATCGGTCACACCTGA...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCTCCTGCAGCTTCTTTTaGTGCTCAGGTGTGACCGAT +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPSCSFF*CSGVTD
Trigger: ATCGGTCACACCTGAGCAGCAAAAGAAGCTGCAGGA...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCACTGGGGTGTGGTCTTaGCCACATCTTCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSATGVWS*PHLPAL
Trigger: AAGTGCTGGAAGATGTGGGCAAGACCACACCCCAGT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTGCCAGTTCATGGGCATaGCGGGGCCACTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTASSWA*RGHWCC
Trigger: GCAGCACCAGTGGCCCCGGCATGCCCATGAACTGGC...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGACAGCGCCACTCCCTCTaGCTTCTTAGGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGQRHSL*LLRLFL
Trigger: GAGAAACAGCCTAAGAAGGCAGAGGGAGTGGCGCTG...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGCCCGGGCTGAGGGCCTaGATGCCCTTCATTCACCCT +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRPGLRA*MPFIHP
Trigger: AGGGTGAATGAAGGGCATGCAGGCCCTCAGCCCGGG...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGACTGGAAAGAAGGGCCTaGGTAACAGCGTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGLERRA*VTASWS
Trigger: GGACCAAGACGCTGTTACGCAGGCCCTTCTTTCCAG...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAAGTCTCACCTGGTGCTaGAGGACTTCTCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPSLTWC*RTSQLL
Trigger: AAGGAGCTGAGAAGTCCTGCAGCACCAGGTGAGACT...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGAGTCTCACCTGGTGCTaGAGGACTTCTCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVSLTWC*RTSQLL
Trigger: AAGGAGCTGAGAAGTCCTGCAGCACCAGGTGAGACT...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTCCCCAGCTCAGGCCCTaGCAGAGTGTCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTPQLRP*QSVRTL
Trigger: GAGGGTCCTGACACTCTGGCAGGGCCTGAGCTGGGG...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTGGCAGGAAGGAGGTCTaGCTGTCCCCGGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTGRKEV*LSPGCH
Trigger: ATGGCACCCCGGGGACAGGCAGACCTCCTTCCTGCC...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTGCAGCCCCTCCCAGGTaGTGGGAAGCCGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSAAPPR*WEAAGT
Trigger: TGTGCCAGCGGCTTCCCAGCACCTGGGAGGGGCTGC...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACACACTCGGTGTTGAGTaGCCTGACACCAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHTLGVE*PDTSTG
Trigger: GCCAGTGCTGGTGTCAGGGCACTCAACACCGAGTGT...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGCAAGTAGGAGCTTACTaGCCCCGCTGGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRQVGAY*PRWARP
Trigger: TGGCCTGGCCCAGCGGGGGCAGTAAGCTCCTACTTG...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538621.2
CDS-3UTR GCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAGTTAGCAGGCTCGGCTaGTCATGCACTGGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQVSRLG*SCTGPV
Trigger: CACGGGCCCAGTGCATGAGCAGCCGAGCCTGCTAAC...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538621.2
CDS-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGCGAAGCGGGACGTCTaGGGCCCGGCCTCAAGCCCG +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGAKRDV*GPASSP
Trigger: CGGGCTTGAGGCCGGGCCCCAGACGTCCCGCTTCGC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTGTAGCCGCAGGGGGATaGACAAGTGCGGAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTVAAGG*TSAELR
Trigger: CCGCAGCTCCGCACTTGTCCATCCCCCTGCGGCTAC...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGCCCAGAAGCTGTCGGTaGTCTCCTCTGGCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRPRSCR*SPLAPV
Trigger: CACTGGCGCCAGAGGAGACCACCGACAGCTTCTGGG...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGCCATGTACTGGGGTGTaGTCTTGCCCACATCTTCCA +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVPCTGV*SCPHLP
Trigger: TGGAAGATGTGGGCAAGACCACACCCCAGTACATGG...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGACTGGGGCCAGTTCATaGGCATGCCGGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLTGASS*ACRGHW
Trigger: CCAGTGGCCCCGGCATGCCCATGAACTGGCCCCAGT...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGCCCCAGCCTGGGATGTaGACTCTACCGCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLPQPGM*TLPPQW
Trigger: CCACTGGGGCGGTAGAGTCCACATCCCAGGCTGGGG...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGGGTTGGCGCCCCCGTTaGTCTCACTGCCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLGWRPR*SHCPQR
Trigger: CCTTTGGGGGCAGTGAGACCAACGGGGGCGCCAACC...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCTTGAGAGCAGGGTGGTaGAGGAAGGGAAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPLRAGW*RKGSRA
Trigger: TGCCCTGCTTCCCTTCCTCCACCACCCTGCTCTCAA...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGACAAGGCTTGGCCTCATaGAGGCTGATGTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGQGLAS*RLMWNP
Trigger: TGGGTTCCACATCAGCCTCCATGAGGCCAAGCCTTG...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCAAGAGGACAGAGGAATaGTTAGGCCAAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPKRTEE*LGQEPC
Trigger: GCAAGGCTCTTGGCCTAACCATTCCTCTGTCCTCTT...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAACCTGATGTCTCAGGCTaGAGGCACCCGTGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQPDVSG*RHPCGL
Trigger: AAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGG...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAATCCCAAACAGGGCCCTaGAGGTGGCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQSQTGP*RWLLRT
Trigger: CGTCCTGAGCAGCCACCTCCAGGGCCCTGTTTGGGA...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTAGGAGGCCGTGGGCATaGCAAGGGGCGTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKARRPWA*QGAWPP
Trigger: TGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCCTCCTTCTCCTCCGTaGTGGCGGGCGGAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSPPSPP*WRAERG
Trigger: CCCCCTCTCCGCCCGCCACCACGGAGGAGAAGGAGG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538621.2
CDS-3UTR TCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGTGCTGCGGAACCATCTaGGGTCTTCCTGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWCCGTI*GLPGHQ
Trigger: CTGATGCCCAGGAAGACCTCAGATGGTTCCGCAGCA...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCTTCTTGGTGGTGGTGTaGGGAAGGTCTGGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPFLVVV*GRSGFH
Trigger: GTGGAACCCAGACCTTCCTCACACCACCACCAAGAA...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTGTGGGACGGAGGGAGTaGGGCGGGGTGGAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFVGRRE*GGVEGS
Trigger: TGACCCTTCCACCCCGCCTCACTCCCTCCGTCCCAC...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGACCCCAGTGACACCATaGCTTCCTCCAGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRTPVTP*LPPAHP
Trigger: GGGGTGAGCTGGAGGAAGTCATGGTGTCACTGGGGT...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTTGGCACAGCCCGGGCTaGGGGCCTGCATGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFWHSPG*GPACPS
Trigger: TGAAGGGCATGCAGGCCCTCAGCCCGGGCTGTGCCA...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGTCCTGCAGCTTCTTTTaGTGCTCAGGTGTGACCGAT +
Preference number: 4 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVSCSFF*CSGVTD
Trigger: ATCGGTCACACCTGAGCAGCAAAAGAAGCTGCAGGA...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGTCATAGTCGTAGAGTaGCCGCACGCGCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWVIVVE*PHAHSL
Trigger: AAGGGAGTGCGCGTGCGGGCACTCTACGACTATGAC...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACCTGGAAAGAAGGGCCTaGGTAACAGCGTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHLERRA*VTASWS
Trigger: GGACCAAGACGCTGTTACGCAGGCCCTTCTTTCCAG...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGCAGGCTGCTACTGTTaGTGGCTTTGCCGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGAGCYC*WLCRRF
Trigger: AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGC...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGATTAGGCCAAGAGCCTTaGAGGTACAAGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGLGQEP*RYKAWP
Trigger: AGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAA...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAACCCAACCCCAACTCCTaGCTGGGGAAAGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQPNPNS*LGKGWR
Trigger: TCTCCAGCCTTTCCCCAGGCAGGAGTTGGGGTTGGG...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTGCAGCCCCTCCCAGGTaGTGGGAAGCCGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAAAPPR*WEAAGT
Trigger: TGTGCCAGCGGCTTCCCAGCACCTGGGAGGGGCTGC...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTGGCCCTGGAGGTGGCTaGTCAGGACGGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSGPGGG*SGRRGF
Trigger: AAACCCCCTCCGTCCTGAGCAGCCACCTCCAGGGCC...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGACCATGTACTGGGGTGTaGTCTTGCCCACATCTTCCA +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGPCTGV*SCPHLP
Trigger: TGGAAGATGTGGGCAAGACCACACCCCAGTACATGG...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTACTGGGGCCAGTTCATaGGCATGCCGGGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSTGASS*ACRGHW
Trigger: CCAGTGGCCCCGGCATGCCCATGAACTGGCCCCAGT...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGGACTGTTACCTACCCTaGGGCCACCCCAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLDCYLP*GHPKPQ
Trigger: CTGGGGCTTGGGGTGGCCCCAGGGTAGGTAACAGTC...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGGGGAGTGAGGCGGGGTaGAAGGGTCAGGAGACATCC +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLGSEAG*KGQETS
Trigger: GGATGTCTCCTGACCCTTCCACCCCGCCTCACTCCC...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTCAGCCTGGAGTGGAGTaGGACGGAGGGAGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSQPGVE*DGGSEA
Trigger: CGCCTCACTCCCTCCGTCCCACTCCACTCCAGGCTG...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCAGGTGCCGGCAGCCTaGAGTGGAGTGGGACGGAGG +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSQVPAA*SGVGRR
Trigger: CCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAACCCTGGAAACCTCCATaGGGGAGGAGGGTGACCGTT +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQPWKPP*GRRVTV
Trigger: AACGGTCACCCTCCTCCCCCATGGAGGTTTCCAGGG...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTTCTTGGTCCCTCAGATaGGCCTGGGGCTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSSWSLR*AWGWEG
Trigger: GCCCTCCCAGCCCCAGGCCCATCTGAGGGACCAAGA...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAATCACCAACCAGCAGGTaGGCCCTTTGCTCCCACCCA +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQSPTSR*ALCSHP
Trigger: TGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGA...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGCTCTCTCTCTTTACCTaGAGGCCCAGGAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWLSLFT*RPRRPG
Trigger: ACCTGGCCTCCTGGGCCTCCAGGTAAAGAGAGAGAG...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTGTGCTGGGAAGCCGCTaGCACAGAGAGGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAVLGSR*HREGEP
Trigger: GGGCTCCCCCTCTCTGTGCCAGCGGCTTCCCAGCAC...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTACAGGGCCCTGGAGGTaGCTGCTCAGGACGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKATGPWR*LLRTEG
Trigger: CCCCTCCGTCCTGAGCAGCCACCTCCAGGGCCCTGT...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGTCCCAAACAGGGCCCTaGAGGTGGCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLSQTGP*RWLLRT
Trigger: CGTCCTGAGCAGCCACCTCCAGGGCCCTGTTTGGGA...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAATGGGGACTGAGAGAGTaGTCCCAAACAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQWGLRE*SQTGPW
Trigger: CCAGGGCCCTGTTTGGGACCACTCTCTCAGTCCCCA...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGCTTGGCCCAGTCGGTaGGCTGCTGCCCGTACGCCT +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGAWPSR*AAARTP
Trigger: AGGCGTACGGGCAGCAGCTCACCGACTGGGCCAAGC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCCCACTCTCGTCGTCTaGCCACTCGGTGGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSPTLVV*PLGGVG
Trigger: CCCTACGCCACCGAGTGGTCAGACGACGAGAGTGGG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTCATGGGGGAGGAGGGTaGCCGTTCCTCCTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFHGGGG*PFLLQS
Trigger: GGACTGGAGGAGGAACGGTCACCCTCCTCCCCCATG...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCATTCCTCCTTTCTGCTaGACTCAGCTGCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPIPPFC*TQLQAL
Trigger: GAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAAT...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGTTCCAAGGTAAGCGATaGGGGACAGAGGCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRFQGKR*GTEAPN
Trigger: GTTGGGGGCCTCTGTCCCTCATCGCTTACCTTGGAA...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGGGTGGCCGTCATCGATaGGCTTCACGGTCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLGGRHR*ASRSAC
Trigger: ACAAGCGGACCGTGAAGCGCATCGATGACGGCCACC...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTAGGCCCGCTCCAGGCTaGCATACTGTGGGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTRPAPG*HTVGLS
Trigger: AGAAAGGCCCACAGTATGGCAGCCTGGAGCGGGCCT...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCTCGCTCACCTTGTCTaGCTCTGTCATTATGGCACC +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPLAHLV*LCHYGT
Trigger: GGTGCCATAATGACAGAGGCAGACAAGGTGAGCGAG...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAGTCTTCTGCACATCCTaGTTGCACTTGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPVFCTS*LHLSTL
Trigger: CAAAGTGGACAAGTGCAAGCAGGATGTGCAGAAGAC...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCACTGGGGTGTGGTCTTaGCCACATCTTCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPTGVWS*PHLPAL
Trigger: AAGTGCTGGAAGATGTGGGCAAGACCACACCCCAGT...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTGCCAGTTCATGGGCATaGCGGGGCCACTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSASSWA*RGHWCC
Trigger: GCAGCACCAGTGGCCCCGGCATGCCCATGAACTGGC...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGGTCATAGTCGTAGAGTaGCCGCACGCGCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRVIVVE*PHAHSL
Trigger: AAGGGAGTGCGCGTGCGGGCACTCTACGACTATGAC...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAGCACTCCGGCACCACTaGTTTCACCAACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQALRHH*FHQPAG
Trigger: ACCTGCTGGTTGGTGAAAGCAGTGGTGCCGGAGTGC...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCTGTCAGGACCCTCTGTaGCCACATGAAGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPCQDPL*PHEEGQ
Trigger: CTGACCTTCTTCATGTGGGCACAGAGGGTCCTGACA...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTCCCCAGCTCAGGCCCTaGCAGAGTGTCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAPQLRP*QSVRTL
Trigger: GAGGGTCCTGACACTCTGGCAGGGCCTGAGCTGGGG...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTCCCCAGCTCAGGCCCTaGCAGAGTGTCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFPQLRP*QSVRTL
Trigger: GAGGGTCCTGACACTCTGGCAGGGCCTGAGCTGGGG...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGAGTCCAGCTGGGGCTaGAGCCCCTCCCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGESSWG*SPSQVL
Trigger: CAGCACCTGGGAGGGGCTGCAGCCCCAGCTGGACTC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTGGCCCTGGAGGTGGCTaGTCAGGACGGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSGPGGG*SGRRGF
Trigger: AAACCCCCTCCGTCCTGAGCAGCCACCTCCAGGGCC...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCCATGTACAAAACAGGTaGATTGCTGAGACCACAGCA +
Preference number: 4 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPHVQNR*IAETTA
Trigger: TGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATG...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTAGGCTCGGCTGCTCATaGACTGGGCCCGTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFRLGCS*TGPVWA
Trigger: TGCCCACACGGGCCCAGTGCATGAGCAGCCGAGCCT...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538621.2
CDS-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTCCGCCCCAGTGGCATTaGTCAGCGCCACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAPPQWH*SAPLPL
Trigger: CAGAGGGAGTGGCGCTGACCAATGCCACTGGGGCGG...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTACTCTACCGCCCCAGTaGCATTGGTCAGCGCCACTC +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTTLPPQ*HWSAPL
Trigger: GAGTGGCGCTGACCAATGCCACTGGGGCGGTAGAGT...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTCGTCTGACCACTCGGTaGCGTAGGGCTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSRLTTR*RRAGLC
Trigger: ACAGAGGCCAGCCCTACGCCACCGAGTGGTCAGACG...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGCTCAGGAGACTCTTTaGTGGAACCCGAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHAQETL*WNPKSR
Trigger: TCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGC...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCAGCCTGGAGTGGAGTaGGACGGAGGGAGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSQPGVE*DGGSEA
Trigger: CGCCTCACTCCCTCCGTCCCACTCCACTCCAGGCTG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGCGGTCCCAAGGGACGTaGCTAGGAGTAGAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLRSQGT*LGVEGC
Trigger: GCACCCTTCTACTCCTAGCCACGTCCCTTGGGACCG...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCTCATGGAGGCTGATGTaGAACCCAGTGATTTTATGG +
Preference number: 4 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGSWRLM*NPVILW
Trigger: CCATAAAATCACTGGGTTCCACATCAGCCTCCATGA...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGAAACAGGGCTGGGCTaGCTCTCTCTCTTTACCTGG +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWETGLG*LSLFTW
Trigger: CCAGGTAAAGAGAGAGAGCCAGCCCAGCCCTGTTTC...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAACCCCAACTCCTGCCTaGGGAAAGGCTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQTPTPA*GKAGER
Trigger: TCTCTCTCCAGCCTTTCCCCAGGCAGGAGTTGGGGT...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTTGGGGACTGAGAGAGTaGTCCCAAACAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTWGLRE*SQTGPW
Trigger: CCAGGGCCCTGTTTGGGACCACTCTCTCAGTCCCCA...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATGAGACCCTCCCGCTCTaGGGCCCTGAGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHETLPL*GPEDLG
Trigger: CCCCAGGTCCTCAGGGCCCCAGAGCGGGAGGGTCTC...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATAGGAGGCCGTGGGCATaGCAAGGGGCGTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHRRPWA*QGAWPP
Trigger: TGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTTACAGGAGGAGGCCGTaGGCATGGCAAGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAYRRRP*AWQGAW
Trigger: CCACGCCCCTTGCCATGCCCACGGCCTCCTCCTGTA...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAGCAGACGGCGGGCGGTaGGGCAGCCCTGGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPADGGR*GSPGSL
Trigger: CAAGGAACCAGGGCTGCCCCACCGCCCGCCGTCTGC...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTCAGGGCTGGAGGGGCTaGCTGTCCTCCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAQGWRG*LSSFSS
Trigger: GGAGGAGAAGGAGGACAGCCAGCCCCTCCAGCCCTG...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538621.2
CDS-3UTR TCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCATGGCACAGCCCGGGCTaGGGGCCTGCATGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPWHSPG*GPACPS
Trigger: TGAAGGGCATGCAGGCCCTCAGCCCGGGCTGTGCCA...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACAAGGTCCTTTCACTCTaGCCCAGGTTTGGAGACATG +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHKVLSL*PRFGDM
Trigger: CATGTCTCCAAACCTGGGTCAGAGTGAAAGGACCTT...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCAGTTCATCAGGTCGTTaGATAGACGGTGGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPSSSGR*IDGGRH
Trigger: ATGACGGCCACCGTCTATGCAACGACCTGATGAACT...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTAGGCCCGCTCCAGGCTaGCATACTGTGGGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSRPAPG*HTVGLS
Trigger: AGAAAGGCCCACAGTATGGCAGCCTGGAGCGGGCCT...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCTGCAGCTTCTTTTGCTaGTCAGGTGTGACCGATTGC +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPCSFFC*SGVTDC
Trigger: GCAATCGGTCACACCTGAGCAGCAAAAGAAGCTGCA...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACTGCAGCTTCTTTTGCTaGTCAGGTGTGACCGATTGC +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHCSFFC*SGVTDC
Trigger: GCAATCGGTCACACCTGAGCAGCAAAAGAAGCTGCA...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCCGCTTTTCCTCAAATTaGTGGCATTGCTCAAACACC +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSARFSSN*WHCSNT
Trigger: GGTGTTTGAGCAATGCCAGCAATTTGAGGAAAAGCG...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAATCAGCCAGGTTGAGGTaGCGTTTGATGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQSARLR*RLMSSS
Trigger: GCTGCTGGACATCAAACGGCACCTCAACCTGGCTGA...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGTCAGCCAGGTTGAGGTaGCGTTTGATGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRSARLR*RLMSSS
Trigger: GCTGCTGGACATCAAACGGCACCTCAACCTGGCTGA...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAAGGGAATGGGGCAGGTaGCGGCAGCCTGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGREWGR*RQPGVE
Trigger: CTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCT...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGGACTTCTCAGCTCCTTaGCCCAGAGGTCCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLDFSAP*PRGPQE
Trigger: CTCTTGGGGACCTCTGGGGCAAGGAGCTGAGAAGTC...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTGGACACACCTCAGGCTaGAGCCGAAGCTCGGAGACC +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFGHTSG*SRSSET
Trigger: GGTCTCCGAGCTTCGGCTGCAGCCTGAGGTGTGTCC...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAGAGTCCAGCTGGGGCTaGAGCCCCTCCCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPESSWG*SPSQVL
Trigger: CAGCACCTGGGAGGGGCTGCAGCCCCAGCTGGACTC...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCCATGTACAAAACAGGTaGATTGCTGAGACCACAGCA +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAHVQNR*IAETTA
Trigger: TGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATG...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCACGGCTGCTCATGCACTaGGGGCAGGAGCTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPRLLMH*GQELRG
Trigger: TCCCCGGAGCTCCTGCCCCCAGTGCATGAGCAGCCG...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGCCTCATCGTAGGAGCTaGACATGGTGTAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLPHRRS*TWCSRR
Trigger: CCTGCGGCTACACCATGTCCAGCTCCTACGATGAGG...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTACGCCTTCTCGATCTTaGCGCGCTCCTGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSTPSRS*RAPARS
Trigger: ACTGCGTGCAGGAGCGCGCCAAGATCGAGAAGGCGT...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGCAGGCTGCCATACTGTaGGCCTTTCTCGATGAGCTG +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRQAAIL*AFLDEL
Trigger: CAGCTCATCGAGAAAGGCCCACAGTATGGCAGCCTG...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCGTCCTCAAAGGGGTTaGCGCCCCCGTTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSRPQRG*RPRWSH
Trigger: GTGAGACCAACGGGGGCGCCAACCCCTTTGAGGACG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTGGAGTGACGGGAGTATaGAGGGAGGGGGCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSGVTGV*REGASR
Trigger: TCTAGAGGCCCCCTCCCTCCATACTCCCGTCACTCC...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCATCGGAAAATATGTCTaGAACTCTATGGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAIGKYV*NSMARG
Trigger: TCCCCTCGCCATAGAGTTCCAGACATATTTTCCGAT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTGACTGTTACCTACCCTaGGGCCACCCCAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSDCYLP*GHPKPQ
Trigger: CTGGGGCTTGGGGTGGCCCCAGGGTAGGTAACAGTC...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGCTCCTCCCCAGCAAATaGGAGCAGGCTGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRLLPSK*EQAATV
Trigger: AACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGGAG...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCTCATGGAGGCTGATGTaGAACCCAGTGATTTTATGG +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSASWRLM*NPVILW
Trigger: CCATAAAATCACTGGGTTCCACATCAGCCTCCATGA...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTGGGAGAATGTTGTTCTaGGGGCCGTGGGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTGRMLF*GPWGQG
Trigger: TCCTTGTCCCCACGGCCCCCAGAACAACATTCTCCC...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGCTCTCTCTCTTTACCTaGAGGCCCAGGAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLLSLFT*RPRRPG
Trigger: ACCTGGCCTCCTGGGCCTCCAGGTAAAGAGAGAGAG...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTCTTCTGCACTGGAGCTaGGAGGACTGCAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTLLHWS*EDCRLP
Trigger: TGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAG...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGCTTCTGCACTGGAGCTaGGAGGACTGCAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLLLHWS*EDCRLP
Trigger: TGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAG...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAACAGGGCCCTGGAGGTaGCTGCTCAGGACGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPTGPWR*LLRTEG
Trigger: CCCCTCCGTCCTGAGCAGCCACCTCCAGGGCCCTGT...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTTCCCAAACAGGGCCCTaGAGGTGGCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSSQTGP*RWLLRT
Trigger: CGTCCTGAGCAGCCACCTCCAGGGCCCTGTTTGGGA...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGAGGAGGCCGTGGGCATaGCAAGGGGCGTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKRRPWA*QGAWPP
Trigger: TGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTGCCCGTGCAGCATCGTaGGTGCAGGCAGGAGCTACA +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAARAAS*VQAGAT
Trigger: TGTAGCTCCTGCCTGCACCCACGATGCTGCACGGGC...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTGCCCGTGCAGCATCGTaGGTGCAGGCAGGAGCTACA +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFARAAS*VQAGAT
Trigger: TGTAGCTCCTGCCTGCACCCACGATGCTGCACGGGC...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGCGGTGGGGCAGCCCTaGTTCCTTGCAGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGAVGQP*FLAEPG
Trigger: GCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCGC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGGTGTGGGCACCAAGCTaGGGGCAAGTAGGAGCTTAC +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLVWAPS*GQVGAY
Trigger: GTAAGCTCCTACTTGCCCCCAGCTTGGTGCCCACAC...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538621.2
3UTR CAA 72 bp GCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTaGCTTCAGGCTCTGAGGAGCCCAGGACACACCTCA +
Preference number: 4 (lower is better)
Translates to: ALELGGLQASKS*LQALRSPGHTS
Trigger: TGAGGTGTGTCCTGGGCTCCTCAGAGCCTGAAGCAAGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGTTCTTGGTGGTGGTGTaGGGAAGGTCTGGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLFLVVV*GRSGFH
Trigger: GTGGAACCCAGACCTTCCTCACACCACCACCAAGAA...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGGTGGGACGGAGGGAGTaGGGCGGGGTGGAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKVGRRE*GGVEGS
Trigger: TGACCCTTCCACCCCGCCTCACTCCCTCCGTCCCAC...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATAGGCTCGGCTGCTCATaGACTGGGGGCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHRLGCS*TGGRSS
Trigger: GGAGCTCCTGCCCCCAGTGCATGAGCAGCCGAGCCT...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000620693.4
CDS-3UTR GCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGTTAGCAGGCTCGGCTaGTCATGCACTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGVSRLG*SCTGGR
Trigger: CCTGCCCCCAGTGCATGAGCAGCCGAGCCTGCTAAC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTAGGGGGATGGACAAGTaGGGAGCTGCGGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFRGMDK*GAAVSR
Trigger: CCTGCTAACCGCAGCTCCGCACTTGTCCATCCCCCT...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCCAGCTTTTCCTCTTTaGAAGCCAAATGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPPAFPL*KPNGRP
Trigger: AGGCCTACCATTTGGCTTGCAAAGAGGAAAAGCTGG...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAACCGATTGCTCCGTCTTaGTGTTCATCTCCCGTGTCA +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQPIAPS*CSSPVS
Trigger: TGACACGGGAGATGAACAGCAAGACGGAGCAATCGG...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCTCTGCACATCCTGCTTaGACTTGTCCACTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPSAHPA*TCPLCP
Trigger: AGGACAAAGTGGACAAGTGCAAGCAGGATGTGCAGA...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGTCTTCTGCACATCCTaGTTGCACTTGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHVFCTS*LHLSTL
Trigger: CAAAGTGGACAAGTGCAAGCAGGATGTGCAGAAGAC...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTTCAGCCAGGTTGAGGTaGCGTTTGATGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTSARLR*RLMSSS
Trigger: GCTGCTGGACATCAAACGGCACCTCAACCTGGCTGA...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTGTCATAGTCGTAGAGTaGCCGCACGCGCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSVIVVE*PHAHSL
Trigger: AAGGGAGTGCGCGTGCGGGCACTCTACGACTATGAC...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAAGGGAATGGGGCAGGTaGCGGCAGCCTGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPREWGR*RQPGVE
Trigger: CTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCT...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAATTAGGCCAAGAGCCTTaGAGGTACAAGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQLGQEP*RYKAWP
Trigger: AGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAA...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATGGCTGGAGGCACCCGTaGGGCCTTCACGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDGWRHP*GLHGLP
Trigger: GGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCC...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCCCAACCCCAACTCCTaGCTGGGGAAAGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSPNPNS*LGKGWR
Trigger: TCTCCAGCCTTTCCCCAGGCAGGAGTTGGGGTTGGG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGGAGTCCAGCTGGGGCTaGAGCCCCTCCCAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKESSWG*SPSQVL
Trigger: CAGCACCTGGGAGGGGCTGCAGCCCCAGCTGGACTC...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATGCCACCGCGTCGCTCTaGGATCTCGCCGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDATASL*DLAGAA
Trigger: CGCAGCCCCGGCGAGATCCCAGAGCGACGCGGTGGC...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000244458.7
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCGTAGGAGCTGGACATaGTGTAGCCGCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSRRSWT*CSRRGM
Trigger: CATCCCCCTGCGGCTACACCATGTCCAGCTCCTACG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTCCTCATCGTAGGAGCTaGACATGGTGTAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSPHRRS*TWCSRR
Trigger: CCTGCGGCTACACCATGTCCAGCTCCTACGATGAGG...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTCCTTTCTCGATGAGCTaGCGCCAACGCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFPFSMS*RQRLAQ
Trigger: CTGGGCCAAGCGTTGGCGCCAGCTCATCGAGAAAGG...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTCAGGCTGCCATACTGTaGGCCTTTCTCGATGAGCTG +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTQAAIL*AFLDEL
Trigger: CAGCTCATCGAGAAAGGCCCACAGTATGGCAGCCTG...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGCCATGTACTGGGGTGTaGTCTTGCCCACATCTTCCA +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRPCTGV*SCPHLP
Trigger: TGGAAGATGTGGGCAAGACCACACCCCAGTACATGG...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTGCACGCGCACTCCCTTaGAGTCGTCCTCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAARALP*SRPQRG
Trigger: ACCCCTTTGAGGACGACTCCAAGGGAGTGCGCGTGC...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTGCACGCGCACTCCCTTaGAGTCGTCCTCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFARALP*SRPQRG
Trigger: ACCCCTTTGAGGACGACTCCAAGGGAGTGCGCGTGC...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTGGAGTGACGGGAGTATaGAGGGAGGGGGCCTCTAGA +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFGVTGV*REGASR
Trigger: TCTAGAGGCCCCCTCCCTCCATACTCCCGTCACTCC...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGGGGGAGGGGCGGCAGTaGGGAGGAGTGACGGGAGTA +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKGEGRQ*GGVTGV
Trigger: TACTCCCGTCACTCCTCCCCACTGCCGCCCCTCCCC...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGGCTCAGGAGACTCTTTaGTGGAACCCGAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRAQETL*WNPKSR
Trigger: TCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGC...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGATTTATGGTTTTTGGATaGACATGGAGGGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGFMVFG*TWRESG
Trigger: CCCACTCTCCCTCCATGTCCATCCAAAAACCATAAA...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGCAAGGCTTGGCCTCATaGAGGCTGATGTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLQGLAS*RLMWNP
Trigger: TGGGTTCCACATCAGCCTCCATGAGGCCAAGCCTTG...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTAGCTCCCCGCCCTCATaGGGTTTTGTCCAACCCTGG +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSSSPPS*GFVQPW
Trigger: CCAGGGTTGGACAAAACCCCATGAGGGCGGGGAGCT...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTTGGGGACTGAGAGAGTaGTCCCAAACAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSWGLRE*SQTGPW
Trigger: CCAGGGCCCTGTTTGGGACCACTCTCTCAGTCCCCA...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCATACAGGAGGAGGCCGTaGGCATGGCAAGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPYRRRP*AWQGAW
Trigger: CCACGCCCCTTGCCATGCCCACGGCCTCCTCCTGTA...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATTGCACTGGGCCCGTGTaGGCACCAAGCTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHCTGPV*APSWGQ
Trigger: TTGCCCCCAGCTTGGTGCCCACACGGGCCCAGTGCA...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538621.2
CDS-3UTR TCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTTGCTGCGGAACCATCTaGGGTCTTCCTGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKACCGTI*GLPGHQ
Trigger: CTGATGCCCAGGAAGACCTCAGATGGTTCCGCAGCA...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAAAAGGTCCTTTCACTCTaGCCCAGGTTTGGAGACATG +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQKVLSL*PRFGDM
Trigger: CATGTCTCCAAACCTGGGTCAGAGTGAAAGGACCTT...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAGTTCATCAGGTCGTTaGATAGACGGTGGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRSSSGR*IDGGRH
Trigger: ATGACGGCCACCGTCTATGCAACGACCTGATGAACT...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAATGCAGCTTCTTTTGCTaGTCAGGTGTGACCGATTGC +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQCSFFC*SGVTDC
Trigger: GCAATCGGTCACACCTGAGCAGCAAAAGAAGCTGCA...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGTTCTCCTGTGTCTTCTaGACATCCTGCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWFSCVF*TSCLHL
Trigger: CAAGTGCAAGCAGGATGTGCAGAAGACACAGGAGAA...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTTCAGCCAGGTTGAGGTaGCGTTTGATGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSSARLR*RLMSSS
Trigger: GCTGCTGGACATCAAACGGCACCTCAACCTGGCTGA...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGTTAGGCCAAGAGCCTTaGAGGTACAAGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLLGQEP*RYKAWP
Trigger: AGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAA...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGGCTGGAGGCACCCGTaGGGCCTTCACGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVGWRHP*GLHGLP
Trigger: GGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTGACTTCTCAGCTCCTTaGCCCAGAGGTCCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKADFSAP*PRGPQE
Trigger: CTCTTGGGGACCTCTGGGGCAAGGAGCTGAGAAGTC...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTAGTCTCACCTGGTGCTaGAGGACTTCTCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTSLTWC*RTSQLL
Trigger: AAGGAGCTGAGAAGTCCTGCAGCACCAGGTGAGACT...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTGCAAGTCTCACCTGGTaGTGCAGGACTTCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSASLTW*CRTSQL
Trigger: GAGCTGAGAAGTCCTGCAGCACCAGGTGAGACTTGC...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAGGACACACCTCAGGCTaGAGCCGAAGCTCGGAGACC +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPGHTSG*SRSSET
Trigger: GGTCTCCGAGCTTCGGCTGCAGCCTGAGGTGTGTCC...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTTGGAGCTGGGAGGACTaGAGGCTTCCAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSWSWED*RLPKAC
Trigger: GCAAGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCA...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTCCCCAAGGTGCAGATTaGCAGCTTCCCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSPQGAD*QLPTFP
Trigger: TGGAAAGGTGGGAAGCTGGCAATCTGCACCTTGGGG...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTACACTCGGTGTTGAGTaGCCTGACACCAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKATLGVE*PDTSTG
Trigger: GCCAGTGCTGGTGTCAGGGCACTCAACACCGAGTGT...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGTGCAGCATCGTGGGTaGAGGCAGGAGCTACAGGAG +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGVQHRG*RQELQE
Trigger: CTCCTGTAGCTCCTGCCTGCACCCACGATGCTGCAC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATACCAGGGCGGGCCCGTaGAGCATCGTGGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDTRAGP*SIVGAG
Trigger: GCCTGCACCCACGATGCTGCACGGGCCCGCCCTGGT...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTGCAGCCCTGGTTCCTTaGAGAACCAGGCCGCAGAAT +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFAALVP*RTRPQN
Trigger: ATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGC...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTGCAGCCCTGGTTCCTTaGAGAACCAGGCCGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSAALVP*RTRPQN
Trigger: ATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGC...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGGCGAAGCGGGACGTCTaGGGCCCGGCCTCAAGCCCG +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEAKRDV*GPASSP
Trigger: CGGGCTTGAGGCCGGGCCCCAGACGTCCCGCTTCGC...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCCTCATCGTAGGAGCTaGACATGGTGTAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSPHRRS*TWCSRR
Trigger: CCTGCGGCTACACCATGTCCAGCTCCTACGATGAGG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTTCGTTGCATAGACGGTaGCCGTCATCGATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSSLHRR*PSSMRF
Trigger: GAAGCGCATCGATGACGGCCACCGTCTATGCAACGA...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGATGTTCTCCATGTACTaGGGTGTGGTCTTGCCCACA +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRMFSMY*GVVLPT
Trigger: TGTGGGCAAGACCACACCCCAGTACATGGAGAACAT...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGCCGCCCCAGTGGCATTaGTCAGCGCCACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKPPQWH*SAPLPL
Trigger: CAGAGGGAGTGGCGCTGACCAATGCCACTGGGGCGG...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAACTCTACCGCCCCAGTaGCATTGGTCAGCGCCACTC +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGTLPPQ*HWSAPL
Trigger: GAGTGGCGCTGACCAATGCCACTGGGGCGGTAGAGT...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGCCCCAGCCTGGGATGTaGACTCTACCGCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKPQPGM*TLPPQW
Trigger: CCACTGGGGCGGTAGAGTCCACATCCCAGGCTGGGG...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACATCGGAAAATATGTCTaGAACTCTATGGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHIGKYV*NSMARG
Trigger: TCCCCTCGCCATAGAGTTCCAGACATATTTTCCGAT...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGCAGCCTGGAGTGGAGTaGGACGGAGGGAGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKQPGVE*DGGSEA
Trigger: CGCCTCACTCCCTCCGTCCCACTCCACTCCAGGCTG...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTCTCCTCCCCAGCAAATaGGAGCAGGCTGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSLLPSK*EQAATV
Trigger: AACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGGAG...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGAGGACAGAGGAATaGTTAGGCCAAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRKRTEE*LGQEPC
Trigger: GCAAGGCTCTTGGCCTAACCATTCCTCTGTCCTCTT...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTGGGAGAATGTTGTTCTaGGGGCCGTGGGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFGRMLF*GPWGQG
Trigger: TCCTTGTCCCCACGGCCCCCAGAACAACATTCTCCC...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTGGTTTTGTCCAACCCTaGTCTGCTTCCCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSGFVQP*SASQAP
Trigger: GGGGGCTTGGGAAGCAGACCAGGGTTGGACAAAACC...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAAGCTCCCCGCCCTCATaGGGTTTTGTCCAACCCTGG +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGSSPPS*GFVQPW
Trigger: CCAGGGTTGGACAAAACCCCATGAGGGCGGGGAGCT...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCTTCTGCACTGGAGCTaGGAGGACTGCAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSLLHWS*EDCRLP
Trigger: TGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATGAGACCCTCCCGCTCTaGGGCCCTGAGGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDETLPL*GPEDLG
Trigger: CCCCAGGTCCTCAGGGCCCCAGAGCGGGAGGGTCTC...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGGCGGTGGGGCAGCCCTaGTTCCTTGCAGAACCAGGC +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKAVGQP*FLAEPG
Trigger: GCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCGC...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGCTCCTCTGGCGCCAGTaGGGCCTCATCGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKLLWRQ*GLIVGA
Trigger: AGCTCCTACGATGAGGCCTCACTGGCGCCAGAGGAG...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGACCAGCAGCACCTCCTTaGGGAAGACCAGCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGPAAPP*GRPAAF
Trigger: AAAAGCGGCTGGTCTTCCTCAAGGAGGTGCTGCTGG...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATGGTGGCCGTCATCGATaGGCTTCACGGTCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHGGRHR*ASRSAC
Trigger: ACAAGCGGACCGTGAAGCGCATCGATGACGGCCACC...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAATCTTGGCGCGCTCCTaGACGCAGTTCATCAGGTCG +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGILARS*TQFIRS
Trigger: CGACCTGATGAACTGCGTGCAGGAGCGCGCCAAGAT...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATAGGCCCGCTCCAGGCTaGCATACTGTGGGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHRPAPG*HTVGLS
Trigger: AGAAAGGCCCACAGTATGGCAGCCTGGAGCGGGCCT...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTTCCTGCAGCTTCTTTTaGTGCTCAGGTGTGACCGAT +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTSCSFF*CSGVTD
Trigger: ATCGGTCACACCTGAGCAGCAAAAGAAGCTGCAGGA...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGTCTGCACATCCTGCTTaGACTTGTCCACTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: AAEARRPDSDKEGGADGRSAHPA*TCPLCP
Trigger: AGGACAAAGTGGACAAGTGCAAGCAGGATGTGCAGA...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAATCTGCACATCCTGCTTaGACTTGTCCACTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQSAHPA*TCPLCP
Trigger: AGGACAAAGTGGACAAGTGCAAGCAGGATGTGCAGA...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTCAGCGCCACTCCCTCTaGCTTCTTAGGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAQRHSL*LLRLFL
Trigger: GAGAAACAGCCTAAGAAGGCAGAGGGAGTGGCGCTG...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGTCATAGTCGTAGAGTaGCCGCACGCGCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGVIVVE*PHAHSL
Trigger: AAGGGAGTGCGCGTGCGGGCACTCTACGACTATGAC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTCTGGAAAGAAGGGCCTaGGTAACAGCGTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFLERRA*VTASWS
Trigger: GGACCAAGACGCTGTTACGCAGGCCCTTCTTTCCAG...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTAGGGGACAGGTCCTCTaGAAGTTGCTGAGGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFRGQVL*KLLRGF
Trigger: AAACCCCCTCAGCAACTTGCAGAGGACCTGTCCCCT...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTTACTGTTGCTGGCTTTaGCGTAGGTTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSYCCWL*RRFGGP
Trigger: GGGACCCCCAAACCTACGGCAAAGCCAGCAACAGTA...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTTCTGCTGAACTCAGCTaGAGGCTCTCCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSSAELS*RLSPDV
Trigger: GACATCAGGGGAGAGCCTGCAGCTGAGTTCAGCAGA...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGAGCAGGTGGGCCCTTTaGTCCCACCCACCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKSRWAL*SHPPPK
Trigger: CTTTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCT...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGGGACACACCTCAGGCTaGAGCCGAAGCTCGGAGACC +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKGHTSG*SRSSET
Trigger: GGTCTCCGAGCTTCGGCTGCAGCCTGAGGTGTGTCC...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTACCAGGGCGGGCCCGTaGAGCATCGTGGGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVTRAGP*SIVGAG
Trigger: GCCTGCACCCACGATGCTGCACGGGCCCGCCCTGGT...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAACGCCTTCTCGATCTTaGCGCGCTCCTGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPTPSRS*RAPARS
Trigger: ACTGCGTGCAGGAGCGCGCCAAGATCGAGAAGGCGT...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCACTGCCTCTGTCATTATaGCACCCCAGGCCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPLPLSL*HPRPAP
Trigger: TGGAGCGGGCCTGGGGTGCCATAATGACAGAGGCAG...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAGCACGCGCACTCCCTTaGAGTCGTCCTCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPARALP*SRPQRG
Trigger: ACCCCTTTGAGGACGACTCCAAGGGAGTGCGCGTGC...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATACCCCAGCCTCCAGGTaGCCCTGCAAATGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHTPASR*PCKCSV
Trigger: GACAGAGCATTTGCAGGGCCACCTGGAGGCTGGGGT...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGCAGGAGACTCTTTGGTaGAACCCGAAGAGCAGATGT +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLQETLW*NPKSRC
Trigger: ACATCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTG...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGATTGAGAGCAGGGTGGTaGAGGAAGGGAAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGLRAGW*RKGSRA
Trigger: TGCCCTGCTTCCCTTCCTCCACCACCCTGCTCTCAA...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATCCCTGGAAACCTCCATaGGGGAGGAGGGTGACCGTT +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHPWKPP*GRRVTV
Trigger: AACGGTCACCCTCCTCCCCCATGGAGGTTTCCAGGG...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTGGCTGCTACTGTTGCTaGCTTTGCCGTAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFGCYCC*LCRRFG
Trigger: CCCAAACCTACGGCAAAGCCAGCAACAGTAGCAGCC...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCAACCCAGTGATTTTATaGTTTTTGGATGGACATGGA +
Preference number: 4 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSANPVIL*FLDGHG
Trigger: TCCATGTCCATCCAAAAACCATAAAATCACTGGGTT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAAACCCAGTGATTTTATaGTTTTTGGATGGACATGGA +
Preference number: 4 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPNPVIL*FLDGHG
Trigger: TCCATGTCCATCCAAAAACCATAAAATCACTGGGTT...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGTCATGGAGGCTGATGTaGAACCCAGTGATTTTATGG +
Preference number: 4 (lower is better)
Translates to: TKHITRRAPPGRARAASWSWRLM*NPVILW
Trigger: CCATAAAATCACTGGGTTCCACATCAGCCTCCATGA...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGAAGAGGACAGAGGAATaGTTAGGCCAAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLKRTEE*LGQEPC
Trigger: GCAAGGCTCTTGGCCTAACCATTCCTCTGTCCTCTT...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGCCTGATGTCTCAGGCTaGAGGCACCCGTGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKPDVSG*RHPCGL
Trigger: AAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGG...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAAGCTCCCCGCCCTCATaGGGTTTTGTCCAACCCTGG +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPSSPPS*GFVQPW
Trigger: CCAGGGTTGGACAAAACCCCATGAGGGCGGGGAGCT...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGACTCTCTCTCTTTACCTaGAGGCCCAGGAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGLSLFT*RPRRPG
Trigger: ACCTGGCCTCCTGGGCCTCCAGGTAAAGAGAGAGAG...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTGAAACAGGGCTGGGCTaGCTCTCTCTCTTTACCTGG +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFETGLG*LSLFTW
Trigger: CCAGGTAAAGAGAGAGAGCCAGCCCAGCCCTGTTTC...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAACCCCAACTCCTGCCTaGGGAAAGGCTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGTPTPA*GKAGER
Trigger: TCTCTCTCCAGCCTTTCCCCAGGCAGGAGTTGGGGT...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGTGGGACGGAGGGAGTaGGGCGGGGTGGAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVVGRRE*GGVEGS
Trigger: TGACCCTTCCACCCCGCCTCACTCCCTCCGTCCCAC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTATTCCTCCTTTCTGCTaGACTCAGCTGCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFIPPFC*TQLQAL
Trigger: GAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAAT...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCATTCCAAGGTAAGCGATaGGGGACAGAGGCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPFQGKR*GTEAPN
Trigger: GTTGGGGGCCTCTGTCCCTCATCGCTTACCTTGGAA...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTAAACAGGTGCATTGCTaGGACCACAGCACTTCTCGG +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAKQVHC*DHSTSR
Trigger: CCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTT...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGAGGGGGATGGACAAGTaGGGAGCTGCGGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKRGMDK*GAAVSR
Trigger: CCTGCTAACCGCAGCTCCGCACTTGTCCATCCCCCT...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGAGGCCCGCTCCAGGCTaGCATACTGTGGGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKRPAPG*HTVGLS
Trigger: AGAAAGGCCCACAGTATGGCAGCCTGGAGCGGGCCT...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTCCGATTGCTCCGTCTTaGTGTTCATCTCCCGTGTCA +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAPIAPS*CSSPVS
Trigger: TGACACGGGAGATGAACAGCAAGACGGAGCAATCGG...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTGTCTTCTGCACATCCTaGTTGCACTTGTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTVFCTS*LHLSTL
Trigger: CAAAGTGGACAAGTGCAAGCAGGATGTGCAGAAGAC...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGCTAGGAGTAGAAGGGTaGTCCCCGGGGCAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKLGVEG*SPGQSG
Trigger: TCCACTCTGCCCCGGGGAGCACCCTTCTACTCCTAG...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTGCAGGCTGCTACTGTTaGTGGCTTTGCCGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFAGCYC*WLCRRF
Trigger: AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGC...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATGCACTCCGGCACCACTaGTTTCACCAACCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHALRHH*FHQPAG
Trigger: ACCTGCTGGTTGGTGAAAGCAGTGGTGCCGGAGTGC...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATGACTTCTCAGCTCCTTaGCCCAGAGGTCCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHDFSAP*PRGPQE
Trigger: CTCTTGGGGACCTCTGGGGCAAGGAGCTGAGAAGTC...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTAGTCTCACCTGGTGCTaGAGGACTTCTCAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSSLTWC*RTSQLL
Trigger: AAGGAGCTGAGAAGTCCTGCAGCACCAGGTGAGACT...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATACACTCGGTGTTGAGTaGCCTGACACCAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHTLGVE*PDTSTG
Trigger: GCCAGTGCTGGTGTCAGGGCACTCAACACCGAGTGT...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCGGCTGCTCATGCACTaGGGGCAGGAGCTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSERLLMH*GQELRG
Trigger: TCCCCGGAGCTCCTGCCCCCAGTGCATGAGCAGCCG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGCCTTTCTCGATGAGCTaGCGCCAACGCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKPFSMS*RQRLAQ
Trigger: CTGGGCCAAGCGTTGGCGCCAGCTCATCGAGAAAGG...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGACAGGCTGCCATACTGTaGGCCTTTCTCGATGAGCTG +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGQAAIL*AFLDEL
Trigger: CAGCTCATCGAGAAAGGCCCACAGTATGGCAGCCTG...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCCGCGGTCCCCAGCCTaGGATGTGGACTCTACCGCC +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEPRSPA*DVDSTA
Trigger: GGCGGTAGAGTCCACATCCCAGGCTGGGGACCGCGG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTTCCCTCAGATGGGCCTaGGGCTGGGAGGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVSLRWA*GWEGWH
Trigger: GTGCCAGCCCTCCCAGCCCCAGGCCCATCTGAGGGA...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAATTTATGGTTTTTGGATaGACATGGAGGGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQFMVFG*TWRESG
Trigger: CCCACTCTCCCTCCATGTCCATCCAAAAACCATAAA...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAACTCTGACCCAGGTTTaGAGACATGGAAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGTLTQV*RHGRAA
Trigger: GGCAGCCCTTCCATGTCTCCAAACCTGGGTCAGAGT...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCACTCTCTCTCTTTACCTaGAGGCCCAGGAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPLSLFT*RPRRPG
Trigger: ACCTGGCCTCCTGGGCCTCCAGGTAAAGAGAGAGAG...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGTGCTGGGAAGCCGCTaGCACAGAGAGGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVVLGSR*HREGEP
Trigger: GGGCTCCCCCTCTCTGTGCCAGCGGCTTCCCAGCAC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTAGGCTGGAGTCCAGCTaGGGCTGCAGCCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVRLESS*GCSPSQ
Trigger: CTGGGAGGGGCTGCAGCCCCAGCTGGACTCCAGCCT...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTACAGGGCCCTGGAGGTaGCTGCTCAGGACGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVTGPWR*LLRTEG
Trigger: CCCCTCCGTCCTGAGCAGCCACCTCCAGGGCCCTGT...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGTTCCAAGGTAAGCGATaGGGGACAGAGGCCCCCAAC +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKFQGKR*GTEAPN
Trigger: GTTGGGGGCCTCTGTCCCTCATCGCTTACCTTGGAA...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTAGTTCATCAGGTCGTTaGATAGACGGTGGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSSSSGR*IDGGRH
Trigger: ATGACGGCCACCGTCTATGCAACGACCTGATGAACT...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGACCGATTGCTCCGTCTTaGTGTTCATCTCCCGTGTCA +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGPIAPS*CSSPVS
Trigger: TGACACGGGAGATGAACAGCAAGACGGAGCAATCGG...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTTGCAGCTTCTTTTGCTaGTCAGGTGTGACCGATTGC +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFCSFFC*SGVTDC
Trigger: GCAATCGGTCACACCTGAGCAGCAAAAGAAGCTGCA...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGCCAGTTCATGGGCATaGCGGGGCCACTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVASSWA*RGHWCC
Trigger: GCAGCACCAGTGGCCCCGGCATGCCCATGAACTGGC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGAGGGAATGGGGCAGGTaGCGGCAGCCTGGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEREWGR*RQPGVE
Trigger: CTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCT...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATTCTGCTGAACTCAGCTaGAGGCTCTCCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHSAELS*RLSPDV
Trigger: GACATCAGGGGAGAGCCTGCAGCTGAGTTCAGCAGA...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAGCAAGTCTCACCTGGTaGTGCAGGACTTCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPASLTW*CRTSQL
Trigger: GAGCTGAGAAGTCCTGCAGCACCAGGTGAGACTTGC...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGATGTCAGGACCCTCTGTaGCCACATGAAGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGCQDPL*PHEEGQ
Trigger: CTGACCTTCTTCATGTGGGCACAGAGGGTCCTGACA...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGGCAGCCCTGGTTCCTTaGAGAACCAGGCCGCAGAAT +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKAALVP*RTRPQN
Trigger: ATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGC...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTATGTTCTCCATGTACTaGGGTGTGGTCTTGCCCACA +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSMFSMY*GVVLPT
Trigger: TGTGGGCAAGACCACACCCCAGTACATGGAGAACAT...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATCGTCTGACCACTCGGTaGCGTAGGGCTGGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDRLTTR*RRAGLC
Trigger: ACAGAGGCCAGCCCTACGCCACCGAGTGGTCAGACG...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGGGTTGGCGCCCCCGTTaGTCTCACTGCCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEGWRPR*SHCPQR
Trigger: CCTTTGGGGGCAGTGAGACCAACGGGGGCGCCAACC...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCAGGAGACTCTTTGGTaGAACCCGAAGAGCAGATGT +
Preference number: 4 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSQETLW*NPKSRC
Trigger: ACATCTGCTCTTCGGGTTCCACCAAAGAGTCTCCTG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGAACCAGGCCAGGGAATaGGGCAGGTGCCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSENQARE*GRCRQP
Trigger: AGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGTTGAGAGCAGGGTGGTaGAGGAAGGGAAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKLRAGW*RKGSRA
Trigger: TGCCCTGCTTCCCTTCCTCCACCACCCTGCTCTCAA...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAGGCTGCTACTGTTGCTaGCTTTGCCGTAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPGCYCC*LCRRFG
Trigger: CCCAAACCTACGGCAAAGCCAGCAACAGTAGCAGCC...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATCTCCTCCCCAGCAAATaGGAGCAGGCTGCTACTGTT +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHLLPSK*EQAATV
Trigger: AACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGGAG...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGTTTATGGTTTTTGGATaGACATGGAGGGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLFMVFG*TWRESG
Trigger: CCCACTCTCCCTCCATGTCCATCCAAAAACCATAAA...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATGAGGGGAAACAGGGCTaGGCTGGCTCTCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHEGKQG*AGSLSL
Trigger: TAAAGAGAGAGAGCCAGCCCAGCCCTGTTTCCCCTC...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGACCCCAACTCCTGCCTaGGGAAAGGCTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKTPTPA*GKAGER
Trigger: TCTCTCTCCAGCCTTTCCCCAGGCAGGAGTTGGGGT...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCAGGTTGACACAGTTCTaGATTTTATCCACAGTCATA +
Preference number: 4 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPRLTQF*ILSTVI
Trigger: TATGACTGTGGATAAAATCCAGAACTGTGTCAACCT...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374043.6
CDS-3UTR TCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCTCCTCTGGCGCCAGTaGGGCCTCATCGTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSELLWRQ*GLIVGA
Trigger: AGCTCCTACGATGAGGCCTCACTGGCGCCAGAGGAG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATGCTTGCTTCAGGCTCTaGGGAGCCCAGGACACACCT +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDACFRL*GAQDTP
Trigger: AGGTGTGTCCTGGGCTCCTCAGAGCCTGAAGCAAGC...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATGGTGGCCGTCATCGATaGGCTTCACGGTCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDGGRHR*ASRSAC
Trigger: ACAAGCGGACCGTGAAGCGCATCGATGACGGCCACC...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTCCAGCTTTTCCTCTTTaGAAGCCAAATGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAPAFPL*KPNGRP
Trigger: AGGCCTACCATTTGGCTTGCAAAGAGGAAAAGCTGG...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAACTGGGGTGTGGTCTTaGCCACATCTTCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPTGVWS*PHLPAL
Trigger: AAGTGCTGGAAGATGTGGGCAAGACCACACCCCAGT...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGCAGCGCCACTCCCTCTaGCTTCTTAGGCTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKQRHSL*LLRLFL
Trigger: GAGAAACAGCCTAAGAAGGCAGAGGGAGTGGCGCTG...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGTACTGTTGCTGGCTTTaGCGTAGGTTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKYCCWL*RRFGGP
Trigger: GGGACCCCCAAACCTACGGCAAAGCCAGCAACAGTA...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGTGGAGCTGGGAGGACTaGAGGCTTCCAAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKWSWED*RLPKAC
Trigger: GCAAGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCA...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATCGTAGGAGCTGGACATaGTGTAGCCGCAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDRRSWT*CSRRGM
Trigger: CATCCCCCTGCGGCTACACCATGTCCAGCTCCTACG...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATGGTGTGAGGAAGGTCTaGGTTCCACTCCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHGVRKV*VPLLKL
Trigger: CAGTTTGAGGAGTGGAACCCAGACCTTCCTCACACC...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCGTCCTCAAAGGGGTTaGCGCCCCCGTTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSERPQRG*RPRWSH
Trigger: GTGAGACCAACGGGGGCGCCAACCCCTTTGAGGACG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGACTGTTACCTACCCTaGGGCCACCCCAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVDCYLP*GHPKPQ
Trigger: CTGGGGCTTGGGGTGGCCCCAGGGTAGGTAACAGTC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGGGGAGTGAGGCGGGGTaGAAGGGTCAGGAGACATCC +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEGSEAG*KGQETS
Trigger: GGATGTCTCCTGACCCTTCCACCCCGCCTCACTCCC...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTTCCCAAACAGGGCCCTaGAGGTGGCTGCTCAGGACG +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVSQTGP*RWLLRT
Trigger: CGTCCTGAGCAGCCACCTCCAGGGCCCTGTTTGGGA...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGGGGGTTTGGATCTGCTaGAGAGCCGATGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKGVWIC*RADAES
Trigger: ACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCC...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGGCTTGCTTCAGGCTCTaGGGAGCCCAGGACACACCT +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEACFRL*GAQDTP
Trigger: AGGTGTGTCCTGGGCTCCTCAGAGCCTGAAGCAAGC...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTAGGGGGATGGACAAGTaGGGAGCTGCGGTTAGCAGG +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVRGMDK*GAAVSR
Trigger: CCTGCTAACCGCAGCTCCGCACTTGTCCATCCCCCT...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATAGTTCATCAGGTCGTTaGATAGACGGTGGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHSSSGR*IDGGRH
Trigger: ATGACGGCCACCGTCTATGCAACGACCTGATGAACT...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGACCAGCTTTTCCTCTTTaGAAGCCAAATGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGPAFPL*KPNGRP
Trigger: AGGCCTACCATTTGGCTTGCAAAGAGGAAAAGCTGG...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATTCAGGTGTGACCGATTaGTCCGTCTTGCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHSGVTD*SVLLFI
Trigger: GATGAACAGCAAGACGGAGCAATCGGTCACACCTGA...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGATTCTCCTGTGTCTTCTaGACATCCTGCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGFSCVF*TSCLHL
Trigger: CAAGTGCAAGCAGGATGTGCAGAAGACACAGGAGAA...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTCGCTTTTCCTCAAATTaGTGGCATTGCTCAAACACC +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFRFSSN*WHCSNT
Trigger: GGTGTTTGAGCAATGCCAGCAATTTGAGGAAAAGCG...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTCTAGGAGTAGAAGGGTaGTCCCCGGGGCAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVLGVEG*SPGQSG
Trigger: TCCACTCTGCCCCGGGGAGCACCCTTCTACTCCTAG...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGACGCCTTCTCGATCTTaGCGCGCTCCTGCACGCAGT +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSETPSRS*RAPARS
Trigger: ACTGCGTGCAGGAGCGCGCCAAGATCGAGAAGGCGT...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCCTTTCTCGATGAGCTaGCGCCAACGCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEPFSMS*RQRLAQ
Trigger: CTGGGCCAAGCGTTGGCGCCAGCTCATCGAGAAAGG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATTTGAGAGCAGGGTGGTaGAGGAAGGGAAGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDLRAGW*RKGSRA
Trigger: TGCCCTGCTTCCCTTCCTCCACCACCCTGCTCTCAA...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCGGTCCCAAGGGACGTaGCTAGGAGTAGAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSERSQGT*LGVEGC
Trigger: GCACCCTTCTACTCCTAGCCACGTCCCTTGGGACCG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATGGGAGAATGTTGTTCTaGGGGCCGTGGGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDGRMLF*GPWGQG
Trigger: TCCTTGTCCCCACGGCCCCCAGAACAACATTCTCCC...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATTTCTTGGTGGTGGTGTaGGGAAGGTCTGGGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDFLVVV*GRSGFH
Trigger: GTGGAACCCAGACCTTCCTCACACCACCACCAAGAA...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATTACTGTTGCTGGCTTTaGCGTAGGTTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDYCCWL*RRFGGP
Trigger: GGGACCCCCAAACCTACGGCAAAGCCAGCAACAGTA...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATTCGTTGCATAGACGGTaGCCGTCATCGATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDSLHRR*PSSMRF
Trigger: GAAGCGCATCGATGACGGCCACCGTCTATGCAACGA...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAATCGGAAAATATGTCTaGAACTCTATGGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGIGKYV*NSMARG
Trigger: TCCCCTCGCCATAGAGTTCCAGACATATTTTCCGAT...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGGTTTTGTCCAACCCTaGTCTGCTTCCCAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVGFVQP*SASQAP
Trigger: GGGGGCTTGGGAAGCAGACCAGGGTTGGACAAAACC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR TCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATGGGGTTTGGATCTGCTaGAGAGCCGATGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDGVWIC*RADAES
Trigger: ACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCC...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTTACTGTTGCTGGCTTTaGCGTAGGTTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVYCCWL*RRFGGP
Trigger: GGGACCCCCAAACCTACGGCAAAGCCAGCAACAGTA...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATGCAGGCTGCTACTGTTaGTGGCTTTGCCGTAGGTTT +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDAGCYC*WLCRRF
Trigger: AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGC...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCCCCAAGGTGCAGATTaGCAGCTTCCCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEPQGAD*QLPTFP
Trigger: TGGAAAGGTGGGAAGCTGGCAATCTGCACCTTGGGG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATCATGTACAAAACAGGTaGATTGCTGAGACCACAGCA +
Preference number: 4 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHHVQNR*IAETTA
Trigger: TGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATG...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATCCATGTACTGGGGTGTaGTCTTGCCCACATCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDPCTGV*SCPHLP
Trigger: TGGAAGATGTGGGCAAGACCACACCCCAGTACATGG...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATGGTGTGAGGAAGGTCTaGGTTCCACTCCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDGVRKV*VPLLKL
Trigger: CAGTTTGAGGAGTGGAACCCAGACCTTCCTCACACC...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAATCGGAAAATATGTCTaGAACTCTATGGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPIGKYV*NSMARG
Trigger: TCCCCTCGCCATAGAGTTCCAGACATATTTTCCGAT...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCATTTATGGTTTTTGGATaGACATGGAGGGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPFMVFG*TWRESG
Trigger: CCCACTCTCCCTCCATGTCCATCCAAAAACCATAAA...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTACTCTGACCCAGGTTTaGAGACATGGAAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVTLTQV*RHGRAA
Trigger: GGCAGCCCTTCCATGTCTCCAAACCTGGGTCAGAGT...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGACTCTGACCCAGGTTTaGAGACATGGAAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSETLTQV*RHGRAA
Trigger: GGCAGCCCTTCCATGTCTCCAAACCTGGGTCAGAGT...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGAGGGGAAACAGGGCTaGGCTGGCTCTCTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVEGKQG*AGSLSL
Trigger: TAAAGAGAGAGAGCCAGCCCAGCCCTGTTTCCCCTC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTGTCAGGACCCTCTGTaGCCACATGAAGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSECQDPL*PHEEGQ
Trigger: CTGACCTTCTTCATGTGGGCACAGAGGGTCCTGACA...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATATGTTCTCCATGTACTaGGGTGTGGTCTTGCCCACA +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDMFSMY*GVVLPT
Trigger: TGTGGGCAAGACCACACCCCAGTACATGGAGAACAT...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGGTGTGAGGAAGGTCTaGGTTCCACTCCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVGVRKV*VPLLKL
Trigger: CAGTTTGAGGAGTGGAACCCAGACCTTCCTCACACC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTAACCCAGTGATTTTATaGTTTTTGGATGGACATGGA +
Preference number: 4 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFNPVIL*FLDGHG
Trigger: TCCATGTCCATCCAAAAACCATAAAATCACTGGGTT...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTCAGGTGTGACCGATTaGTCCGTCTTGCTGTTCATC +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSESGVTD*SVLLFI
Trigger: GATGAACAGCAAGACGGAGCAATCGGTCACACCTGA...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTCCTGCAGCTTCTTTTaGTGCTCAGGTGTGACCGAT +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSESCSFF*CSGVTD
Trigger: ATCGGTCACACCTGAGCAGCAAAAGAAGCTGCAGGA...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTAAGAGGACAGAGGAATaGTTAGGCCAAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVKRTEE*LGQEPC
Trigger: GCAAGGCTCTTGGCCTAACCATTCCTCTGTCCTCTT...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTCCAGCTTTTCCTCTTTaGAAGCCAAATGGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVPAFPL*KPNGRP
Trigger: AGGCCTACCATTTGGCTTGCAAAGAGGAAAAGCTGG...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTCTGCACATCCTGCTTaGACTTGTCCACTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSESAHPA*TCPLCP
Trigger: AGGACAAAGTGGACAAGTGCAAGCAGGATGTGCAGA...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTCTCCTGTGTCTTCTaGACATCCTGCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEFSCVF*TSCLHL
Trigger: CAAGTGCAAGCAGGATGTGCAGAAGACACAGGAGAA...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTTTCTCCTGTGTCTTCTaGACATCCTGCTTGCACTTG +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVFSCVF*TSCLHL
Trigger: CAAGTGCAAGCAGGATGTGCAGAAGACACAGGAGAA...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATCATGTACAAAACAGGTaGATTGCTGAGACCACAGCA +
Preference number: 4 (lower is better)
Translates to: GLASWRLMWNPVILWFLDHVQNR*IAETTA
Trigger: TGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATG...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTCGCTTTTCCTCAAATTaGTGGCATTGCTCAAACACC +
Preference number: 4 (lower is better)
Translates to: HNHVQNRCIAETTALLGVRFSSN*WHCSNT
Trigger: GGTGTTTGAGCAATGCCAGCAATTTGAGGAAAAGCG...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR GCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCGCTTTTCCTCAAATTaGTGGCATTGCTCAAACACC +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSERFSSN*WHCSNT
Trigger: GGTGTTTGAGCAATGCCAGCAATTTGAGGAAAAGCG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CCA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTCATGGAGGCTGATGTaGAACCCAGTGATTTTATGG +
Preference number: 4 (lower is better)
Translates to: YTIMYKTGALLRPQHFSESWRLM*NPVILW
Trigger: CCATAAAATCACTGGGTTCCACATCAGCCTCCATGA...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCACCGCCCCAGTGGCATaGGTCAGCGCCACTCCCTCT +
Preference number: 5 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGTAPVA*VSATPS
Trigger: AGAGGGAGTGGCGCTGACCAATGCCACTGGGGCGGT...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCACCGCCCCAGTGGCATaGGTCAGCGCCACTCCCTCT +
Preference number: 5 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPTAPVA*VSATPS
Trigger: AGAGGGAGTGGCGCTGACCAATGCCACTGGGGCGGT...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCGGGTTGGCGCCCCCGTaGGTCTCACTGCCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAGLAPP*VSLPPK
Trigger: CTTTGGGGGCAGTGAGACCAACGGGGGCGCCAACCC...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCGCACGCGCACTCCCTaGGAGTCGTCCTCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGRTRTP*ESSSKG
Trigger: CCCCTTTGAGGACGACTCCAAGGGAGTGCGCGTGCG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAACCGCCCCAGTGGCATaGGTCAGCGCCACTCCCTCT +
Preference number: 5 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPTAPVA*VSATPS
Trigger: AGAGGGAGTGGCGCTGACCAATGCCACTGGGGCGGT...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCGGCAGCCCTGGTTCCTaGCAGAACCAGGCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGGSPGS*QNQAAE
Trigger: TTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCC...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGACGCACGCGCACTCCCTaGGAGTCGTCCTCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGRTRTP*ESSSKG
Trigger: CCCCTTTGAGGACGACTCCAAGGGAGTGCGCGTGCG...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGATCCTCCTCGCCCAGCTaGGTGAGTTCGTCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGSSSPS*VSSSPA
Trigger: GGCCGGAGACGAACTCACCAAGCTGGGCGAGGAGGA...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCCTGCGTAACAGCGTCTaGGTCCCTCAGATGGGCCTG +
Preference number: 5 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGLRNSV*VPQMGL
Trigger: CAGGCCCATCTGAGGGACCAAGACGCTGTTACGCAG...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGGGCAGCCCTGGTTCCTaGCAGAACCAGGCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVGSPGS*QNQAAE
Trigger: TTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCC...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp GGCCCTGGAGCTCAGGGGGACTTCCAGGTAGGAGACCCTCCCGCTCTGGGGCCCGCCTCCTTCGTCTCCTaGAAGCCACCCATGATCTGC +
Preference number: 5 (lower is better)
Translates to: GPGAQGDFQVGDPPALGPASFVS*KPPMIC
Trigger: GCAGATCATGGGTGGCTTCAAGGAGACGAAGGAGGC...GGGCCCCAGAGCGGGAGGGTCTCCTACCTGGAAGTCCCCCTGAGCTCCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCTCCAGCAGCACCTCCTaGAGGAAGACCAGCCGCTTT +
Preference number: 5 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGSSSTS*RKTSRF
Trigger: AAAGCGGCTGGTCTTCCTCAAGGAGGTGCTGCTGGA...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGGAGTGCTGCGTAACAGCGTCTaGGTCCCTCAGATGGGCCTG +
Preference number: 5 (lower is better)
Translates to: PGNGAGAGSLEWSGTEGVLRNSV*VPQMGL
Trigger: CAGGCCCATCTGAGGGACCAAGACGCTGTTACGCAG...CACTCCCTCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCGTTAGGCCAAGAGCCTaGCAGGTACAAGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PLMSQAGGTRAAFTGSPGVRPRA*QVQGLA
Trigger: GGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAAC...GCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGACCCCCACACTCGGTGTaGAGTGCCCTGACACCAGCA +
Preference number: 5 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGPPHSV*SALTPA
Trigger: TGCTGGTGTCAGGGCACTCAACACCGAGTGTGGGGG...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS CCA 90 bp GCTCCTGGCCGTCATAGTCGTAGAGTGCCCGCACGCGCACTCCCTTaGAGTCGTCCTCAAAGGGGTTGGCGCCCCCGTTGGTCTCACTGC +
Preference number: 5 (lower is better)
Translates to: APGRHSRRVPARALP*SRPQRGWRPRWSHC
Trigger: GCAGTGAGACCAACGGGGGCGCCAACCCCTTTGAGGACGACTCCAAGGGAGTGCGCGTGCGGGCACTCTACGACTATGACGGCCAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCAGCTCCTTCATCTTCTaGGCCCAAGGCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSASSFIF*AQGFWA
Trigger: GGCCCAGAAGCCTTGGGCCAAGAAGATGAAGGAGCT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCAAGCTCCTTCATCTTCTaGGCCCAAGGCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPSSFIF*AQGFWA
Trigger: GGCCCAGAAGCCTTGGGCCAAGAAGATGAAGGAGCT...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCAGGTTGAGGTGCCGTTaGATGTCCAGCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSARLRCR*MSSSTS
Trigger: GGAGGTGCTGCTGGACATCAAACGGCACCTCAACCT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGACCGCCCCAGTGGCATaGGTCAGCGCCACTCCCTCT +
Preference number: 5 (lower is better)
Translates to: TKHITRRAPPGRARAASWTAPVA*VSATPS
Trigger: AGAGGGAGTGGCGCTGACCAATGCCACTGGGGCGGT...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGGGGTTGGCGCCCCCGTaGGTCTCACTGCCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: AAEARRPDSDKEGGADGRGLAPP*VSLPPK
Trigger: CTTTGGGGGCAGTGAGACCAACGGGGGCGCCAACCC...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACTCGTCCTCAAAGGGGTaGGCGCCCCCGTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHSSSKG*APPLVS
Trigger: TGAGACCAACGGGGGCGCCAACCCCTTTGAGGACGA...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACCCAGCAGGGAGAATGTaGTTCTGGGGGCCGTGGGGA +
Preference number: 5 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHPAGRM*FWGPWG
Trigger: TCCCCACGGCCCCCAGAACAACATTCTCCCTGCTGG...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGGACTTCTCAGCTCCTaGCCCCAGAGGTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGGLLSS*PQRSPR
Trigger: TCTTGGGGACCTCTGGGGCAAGGAGCTGAGAAGTCC...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS TCA 90 bp GTTCCCCACCTCCCAGAAGCTGTCGGTGGTCTCCTCTGGCGCCAGTaGGGCCTCATCGTAGGAGCTGGACATGGTGTAGCCGCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: VPHLPEAVGGLLWRQ*GLIVGAGHGVAAGG
Trigger: TCCCCCTGCGGCTACACCATGTCCAGCTCCTACGATGAGGCCTCACTGGCGCCAGAGGAGACCACCGACAGCTTCTGGGAGGTGGGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000487760.1
ENST00000493633.5
ENST00000538621.2
ENST00000620693.4
CDS CCA 90 bp TGTCGGTGGTCTCCTCTGGCGCCAGTGAGGCCTCATCGTAGGAGCTaGACATGGTGTAGCCGCAGGGGGATGGACAAGTGCGGAGCTGCG +
Preference number: 5 (lower is better)
Translates to: CRWSPLAPVRPHRRS*TWCSRRGMDKCGAA
Trigger: CGCAGCTCCGCACTTGTCCATCCCCCTGCGGCTACACCATGTCCAGCTCCTACGATGAGGCCTCACTGGCGCCAGAGGAGACCACCGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000487760.1
ENST00000493633.5
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp ATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGGCTCCCCAGGCAGGCCACAGTTCATCAGGTCGTaGCATAGACGGTGGCCGTCA +
Preference number: 5 (lower is better)
Translates to: MSQAGGTRAAFTGSPGRPQFIRS*HRRWPS
Trigger: TGACGGCCACCGTCTATGCAACGACCTGATGAACTG...TGGCCTGCCTGGGGAGCCCGTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGCCTCCTTCGTCTCCTaGAAGCCACCCATGATCTGC +
Preference number: 5 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGASFVS*KPPMIC
Trigger: GCAGATCATGGGTGGCTTCAAGGAGACGAAGGAGGC...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCACCGATTGCTCCGTCTaGCTGTTCATCTCCCGTGTC +
Preference number: 5 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSATDCSV*LFISRV
Trigger: GACACGGGAGATGAACAGCAAGACGGAGCAATCGGT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCGTCCTGCAGCTTCTTTaGCTGCTCAGGTGTGACCGA +
Preference number: 5 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSAVLQLL*LLRCDR
Trigger: TCGGTCACACCTGAGCAGCAAAAGAAGCTGCAGGAC...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGTCGTCCTCAAAGGGGTaGGCGCCCCCGTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: TKHITRRAPPGRARAASWSSSKG*APPLVS
Trigger: TGAGACCAACGGGGGCGCCAACCCCTTTGAGGACGA...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGAGTTAGGCCAAGAGCCTaGCAGGTACAAGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGVRPRA*QVQGLA
Trigger: GGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAAC...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGCCCCCACACTCGGTGTaGAGTGCCCTGACACCAGCA +
Preference number: 5 (lower is better)
Translates to: TKHITRRAPPGRARAASWPPHSV*SALTPA
Trigger: TGCTGGTGTCAGGGCACTCAACACCGAGTGTGGGGG...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGGCAGCCCTGGTTCCTaGCAGAACCAGGCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: TKHITRRAPPGRARAASWGSPGS*QNQAAE
Trigger: TTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCC...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS TCA 90 bp CCCGTTGGTCTCACTGCCCCCAAAGGGGTTCCCACTCTCGTCGTCTaGCCACTCGGTGGCGTAGGGCTGGCCTCTGTCGTAGCTGCTAAC +
Preference number: 5 (lower is better)
Translates to: PVGLTAPKGVPTLVV*PLGGVGLASVVAAN
Trigger: GTTAGCAGCTACGACAGAGGCCAGCCCTACGCCACCGAGTGGTCAGACGACGAGAGTGGGAACCCCTTTGGGGGCAGTGAGACCAACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS CCA 90 bp TGGTCTCCTCTGGCGCCAGTGAGGCCTCATCGTAGGAGCTGGACATaGTGTAGCCGCAGGGGGATGGACAAGTGCGGAGCTGCGGTTAGC +
Preference number: 5 (lower is better)
Translates to: WSPLAPVRPHRRSWT*CSRRGMDKCGAAVS
Trigger: GCTAACCGCAGCTCCGCACTTGTCCATCCCCCTGCGGCTACACCATGTCCAGCTCCTACGATGAGGCCTCACTGGCGCCAGAGGAGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000487760.1
ENST00000493633.5
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGAGGCCGTGGGCATGGCAAGGGGCGTGGCCCCCACACTCGGTGTTGAGTGCCACATCCTGCTTGCACTaGTCCACTTTGTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RRPWAWQGAWPPHSVLSATSCLH*STLSCS
Trigger: GCTGCAGGACAAAGTGGACAAGTGCAAGCAGGATGT...GGCACTCAACACCGAGTGTGGGGGCCACGCCCCTTGCCATGCCCACGGCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCTCCAGCAGCACCTCCTaGAGGAAGACCAGCCGCTTT +
Preference number: 5 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPSSSTS*RKTSRF
Trigger: AAAGCGGCTGGTCTTCCTCAAGGAGGTGCTGCTGGA...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACTCCAGCAGCACCTCCTaGAGGAAGACCAGCCGCTTT +
Preference number: 5 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHSSSTS*RKTSRF
Trigger: AAAGCGGCTGGTCTTCCTCAAGGAGGTGCTGCTGGA...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGTCCTCCTCGCCCAGCTaGGTGAGTTCGTCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLSSSPS*VSSSPA
Trigger: GGCCGGAGACGAACTCACCAAGCTGGGCGAGGAGGA...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACGGCTCAGGAGACTCTTaGGTGGAACCCGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHGSGDS*VEPEEQ
Trigger: CTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGCC...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGAGCTCCTTCATCTTCTaGGCCCAAGGCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: TKHITRRAPPGRARAASWSSFIF*AQGFWA
Trigger: GGCCCAGAAGCCTTGGGCCAAGAAGATGAAGGAGCT...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGGCTCAGGAGACTCTTaGGTGGAACCCGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: TKHITRRAPPGRARAASWGSGDS*VEPEEQ
Trigger: CTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGCC...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGCTGCGTAACAGCGTCTaGGTCCCTCAGATGGGCCTG +
Preference number: 5 (lower is better)
Translates to: AAEARRPDSDKEGGADGRLRNSV*VPQMGL
Trigger: CAGGCCCATCTGAGGGACCAAGACGCTGTTACGCAG...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGCTGCAGGCTCTCCCCTGATGTCTCAGGCTGGAGGCACCCGTGCGGCCTTCACCAGGTCCTCTGCAAGTaGCTGAGGGGGTTTGGATCT +
Preference number: 5 (lower is better)
Translates to: SCRLSPDVSGWRHPCGLHQVLCK*LRGFGS
Trigger: AGATCCAAACCCCCTCAGCAACTTGCAGAGGACCTG...GTGAAGGCCGCACGGGTGCCTCCAGCCTGAGACATCAGGGGAGAGCCTGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAGGTCCTCTGCAAGTaGCTGAGGGGGTTTGGATCT +
Preference number: 5 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPQVLCK*LRGFGS
Trigger: AGATCCAAACCCCCTCAGCAACTTGCAGAGGACCTG...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGGTTAGGCCAAGAGCCTaGCAGGTACAAGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: TKHITRRAPPGRARAASWVRPRA*QVQGLA
Trigger: GGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAAC...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTCCCCCACACTCGGTGTaGAGTGCCCTGACACCAGCA +
Preference number: 5 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTPPHSV*SALTPA
Trigger: TGCTGGTGTCAGGGCACTCAACACCGAGTGTGGGGG...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS GCA 90 bp CTTAAAGCTGAGCTCGTCCTGCTCCTGGCCGTCATAGTCGTAGAGTaGCCGCACGCGCACTCCCTTGGAGTCGTCCTCAAAGGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: LKAELVLLLAVIVVE*PHAHSLGVVLKGVG
Trigger: GCCAACCCCTTTGAGGACGACTCCAAGGGAGTGCGCGTGCGGGCACTCTACGACTATGACGGCCAGGAGCAGGACGAGCTCAGCTTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAAGCTGGCGCCAACGCTaGGCCCAGTCGGTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGSWRQR*AQSVSC
Trigger: GCAGCTCACCGACTGGGCCAAGCGTTGGCGCCAGCT...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGACCGATTGCTCCGTCTaGCTGTTCATCTCCCGTGTC +
Preference number: 5 (lower is better)
Translates to: TKHITRRAPPGRARAASWTDCSV*LFISRV
Trigger: GACACGGGAGATGAACAGCAAGACGGAGCAATCGGT...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCACATCCTGCTTGCACTaGTCCACTTTGTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPTSCLH*STLSCS
Trigger: GCTGCAGGACAAAGTGGACAAGTGCAAGCAGGATGT...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AACCAGGCCAGGGAATGGGGCAGGTGCCGGCAGCCTGGAGTGGAGTGGGACGGATTCTGCACATCCTGCTaGCACTTGTCCACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: NQAREWGRCRQPGVEWDGFCTSC*HLSTLS
Trigger: GGACAAAGTGGACAAGTGCAAGCAGGATGTGCAGAA...TCCGTCCCACTCCACTCCAGGCTGCCGGCACCTGCCCCATTCCCTGGCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGGGTTGGCGCCCCCGTaGGTCTCACTGCCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGGLAPP*VSLPPK
Trigger: CTTTGGGGGCAGTGAGACCAACGGGGGCGCCAACCC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCGCACGCGCACTCCCTaGGAGTCGTCCTCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSRTRTP*ESSSKG
Trigger: CCCCTTTGAGGACGACTCCAAGGGAGTGCGCGTGCG...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTCGCACGCGCACTCCCTaGGAGTCGTCCTCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFRTRTP*ESSSKG
Trigger: CCCCTTTGAGGACGACTCCAAGGGAGTGCGCGTGCG...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTTCCTCCTCGCCCAGCTaGGTGAGTTCGTCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFSSSPS*VSSSPA
Trigger: GGCCGGAGACGAACTCACCAAGCTGGGCGAGGAGGA...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTCTGCGTAACAGCGTCTaGGTCCCTCAGATGGGCCTG +
Preference number: 5 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTLRNSV*VPQMGL
Trigger: CAGGCCCATCTGAGGGACCAAGACGCTGTTACGCAG...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTGGACTTCTCAGCTCCTaGCCCCAGAGGTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTGLLSS*PQRSPR
Trigger: TCTTGGGGACCTCTGGGGCAAGGAGCTGAGAAGTCC...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CGGCACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCTTCTGCACATCCTGCTaGCACTTGTCCACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: RHHCFHQPAGGPFAPTHPFCTSC*HLSTLS
Trigger: GGACAAAGTGGACAAGTGCAAGCAGGATGTGCAGAA...GGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTTCCAGCAGCACCTCCTaGAGGAAGACCAGCCGCTTT +
Preference number: 5 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTSSSTS*RKTSRF
Trigger: AAAGCGGCTGGTCTTCCTCAAGGAGGTGCTGCTGGA...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAGGGTTGGCGCCCCCGTaGGTCTCACTGCCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPGLAPP*VSLPPK
Trigger: CTTTGGGGGCAGTGAGACCAACGGGGGCGCCAACCC...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTTCGTCCTCAAAGGGGTaGGCGCCCCCGTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFSSSKG*APPLVS
Trigger: TGAGACCAACGGGGGCGCCAACCCCTTTGAGGACGA...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGCGCCCTCATGGGGTTTaGTCCAACCCTGGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLRPHGV*SNPGLL
Trigger: AAGCAGACCAGGGTTGGACAAAACCCCATGAGGGCG...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTCAGTTCATCAGGTCGTaGCATAGACGGTGGCCGTCA +
Preference number: 5 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTQFIRS*HRRWPS
Trigger: TGACGGCCACCGTCTATGCAACGACCTGATGAACTG...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGCAGTTCATCAGGTCGTaGCATAGACGGTGGCCGTCA +
Preference number: 5 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLQFIRS*HRRWPS
Trigger: TGACGGCCACCGTCTATGCAACGACCTGATGAACTG...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp ACAAAACACATTACTCGCCGAGCCCCACCAGGGCGGGCCCGTGCAGCATCGTGGTCCTCATTCAGCAGATaGTTCTTCACCTCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: TKHITRRAPPGRARAASWSSFSR*FFTSWC
Trigger: GCACCAGGAGGTGAAGAACAATCTGCTGAATGAGGA...CCACGATGCTGCACGGGCCCGCCCTGGTGGGGCTCGGCGAGTAATGTGTTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTGGCTCAGGAGACTCTTaGGTGGAACCCGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSGSGDS*VEPEEQ
Trigger: CTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGCC...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTAAGAAGGTCAGAGCCTaGAGGCTGGGGTCTACTACC +
Preference number: 5 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTKKVRA*RLGSTT
Trigger: GGTAGTAGACCCCAGCCTCAAGGCTCTGACCTTCTT...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGCAGGCTTCCAAAAGCTaGCTTCAGGCTCTGAGGAGC +
Preference number: 5 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLQASKS*LQALRS
Trigger: GCTCCTCAGAGCCTGAAGCAAGCTTTTGGAAGCCTG...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp GCAGCCGAAGCTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGTCCTCATTCAGCAGATaGTTCTTCACCTCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: AAEARRPDSDKEGGADGRSSFSR*FFTSWC
Trigger: GCACCAGGAGGTGAAGAACAATCTGCTGAATGAGGA...CCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAGCTTCGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CGGTGGGGCAGCCCTGGTTCCTTGCAGAACCAGGCCGCAGAATGGTGGTTAACTCTCAGGTGTGACCGATaGCTCCGTCTTGCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: RWGSPGSLQNQAAEWWLTLRCDR*LRLAVH
Trigger: ATGAACAGCAAGACGGAGCAATCGGTCACACCTGAG...AGTTAACCACCATTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCCCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCTGAGGGCCAGGATTCCTCCTTTCTGCTGAACTCAGCTGCAGGCTCTCCCCTGCTCAGGTGTGACCGATaGCTCCGTCTTGCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: PEGQDSSFLLNSAAGSPLLRCDR*LRLAVH
Trigger: ATGAACAGCAAGACGGAGCAATCGGTCACACCTGAG...CAGGGGAGAGCCTGCAGCTGAGTTCAGCAGAAAGGAGGAATCCTGGCCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CACCACTGCTTTCACCAACCAGCAGGTGGGCCCTTTGCTCCCACCCACCCCCAATTCTGCACATCCTGCTaGCACTTGTCCACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: HHCFHQPAGGPFAPTHPQFCTSC*HLSTLS
Trigger: GGACAAAGTGGACAAGTGCAAGCAGGATGTGCAGAA...TTGGGGGTGGGTGGGAGCAAAGGGCCCACCTGCTGGTTGGTGAAAGCAGTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCATCGTCCTCAAAGGGGTaGGCGCCCCCGTTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPSSSKG*APPLVS
Trigger: TGAGACCAACGGGGGCGCCAACCCCTTTGAGGACGA...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCACCAGCAGGGAGAATGTaGTTCTGGGGGCCGTGGGGA +
Preference number: 5 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPPAGRM*FWGPWG
Trigger: TCCCCACGGCCCCCAGAACAACATTCTCCCTGCTGG...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATCCAGCAGGGAGAATGTaGTTCTGGGGGCCGTGGGGA +
Preference number: 5 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHPAGRM*FWGPWG
Trigger: TCCCCACGGCCCCCAGAACAACATTCTCCCTGCTGG...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTCGCCCTCATGGGGTTTaGTCCAACCCTGGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: WRERLLHWSWEDCRLPKARPHGV*SNPGLL
Trigger: AAGCAGACCAGGGTTGGACAAAACCCCATGAGGGCG...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCACCCCCACACTCGGTGTaGAGTGCCCTGACACCAGCA +
Preference number: 5 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPPPHSV*SALTPA
Trigger: TGCTGGTGTCAGGGCACTCAACACCGAGTGTGGGGG...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTGTCCTGCAGCTTCTTTaGCTGCTCAGGTGTGACCGA +
Preference number: 5 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAVLQLL*LLRCDR
Trigger: TCGGTCACACCTGAGCAGCAAAAGAAGCTGCAGGAC...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAAGGTTGAGGTGCCGTTaGATGTCCAGCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGRLRCR*MSSSTS
Trigger: GGAGGTGCTGCTGGACATCAAACGGCACCTCAACCT...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTCTGTTCTCAGCCAGGTaGAGGTGCCGTTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: WRERLLHWSWEDCRLPKALFSAR*RCRLMS
Trigger: GGACATCAAACGGCACCTCAACCTGGCTGAGAACAG...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGGCTCAGGAGACTCTTaGGTGGAACCCGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGGSGDS*VEPEEQ
Trigger: CTGCTCTTCGGGTTCCACCAAAGAGTCTCCTGAGCC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTCAGGTCCTCTGCAAGTaGCTGAGGGGGTTTGGATCT +
Preference number: 5 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAQVLCK*LRGFGS
Trigger: AGATCCAAACCCCCTCAGCAACTTGCAGAGGACCTG...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTCACCTGGTGCTGCAGGAGTTAGGCCAAGAGCCTaGCAGGTACAAGGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: QRPRSGIHCKQVSPGAAGVRPRA*QVQGLA
Trigger: GGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAAC...TCCTGCAGCACCAGGTGAGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTAAGAAGGTCAGAGCCTaGAGGCTGGGGTCTACTACC +
Preference number: 5 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFKKVRA*RLGSTT
Trigger: GGTAGTAGACCCCAGCCTCAAGGCTCTGACCTTCTT...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTAAGAAGGTCAGAGCCTaGAGGCTGGGGTCTACTACC +
Preference number: 5 (lower is better)
Translates to: WRERLLHWSWEDCRLPKAKKVRA*RLGSTT
Trigger: GGTAGTAGACCCCAGCCTCAAGGCTCTGACCTTCTT...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTCAGGCTTCCAAAAGCTaGCTTCAGGCTCTGAGGAGC +
Preference number: 5 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFQASKS*LQALRS
Trigger: GCTCCTCAGAGCCTGAAGCAAGCTTTTGGAAGCCTG...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGGGCAGCCCTGGTTCCTaGCAGAACCAGGCCGCAGAA +
Preference number: 5 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKGSPGS*QNQAAE
Trigger: TTCTGCGGCCTGGTTCTGCAAGGAACCAGGGCTGCC...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGGAGAGAGAGGCTTCTGCACTGGAGCTGGGAGGACTGCAGGCTTCCAAAAGCTCTCAGGTGTGACCGATaGCTCCGTCTTGCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: WRERLLHWSWEDCRLPKALRCDR*LRLAVH
Trigger: ATGAACAGCAAGACGGAGCAATCGGTCACACCTGAG...AGCTTTTGGAAGCCTGCAGTCCTCCCAGCTCCAGTGCAGAAGCCTCTCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCAAGGTTGAGGTGCCGTTaGATGTCCAGCAGCACCTCC +
Preference number: 5 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPRLRCR*MSSSTS
Trigger: GGAGGTGCTGCTGGACATCAAACGGCACCTCAACCT...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTTCCTCATTCAGCAGATaGTTCTTCACCTCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFSSFSR*FFTSWC
Trigger: GCACCAGGAGGTGAAGAACAATCTGCTGAATGAGGA...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGGCCTCCTTCGTCTCCTaGAAGCCACCCATGATCTGC +
Preference number: 5 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKASFVS*KPPMIC
Trigger: GCAGATCATGGGTGGCTTCAAGGAGACGAAGGAGGC...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATACCGATTGCTCCGTCTaGCTGTTCATCTCCCGTGTC +
Preference number: 5 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHTDCSV*LFISRV
Trigger: GACACGGGAGATGAACAGCAAGACGGAGCAATCGGT...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CTCGGAGACCAGACAGTGATAAGGAAGGGGGTGCTGACGGCAGGAAGGAGGTCTTTGCACTTGTCCACTTaGTCCTGCAGCTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: LGDQTVIRKGVLTAGRRSLHLST*SCSFFC
Trigger: GCAAAAGAAGCTGCAGGACAAAGTGGACAAGTGCAA...AGACCTCCTTCCTGCCGTCAGCACCCCCTTCCTTATCACTGTCTGGTCTCCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CCTCCCCAGCAAATGGGAGCAGGCTGCTACTGTTGCTGGCTTTGCCGTAGGTTTTTCTGCACATCCTGCTaGCACTTGTCCACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: PPQQMGAGCYCCWLCRRFFCTSC*HLSTLS
Trigger: GGACAAAGTGGACAAGTGCAAGCAGGATGTGCAGAA...AAACCTACGGCAAAGCCAGCAACAGTAGCAGCCTGCTCCCATTTGCTGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTTCCTCCTCGCCCAGCTaGGTGAGTTCGTCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: HNHVQNRCIAETTALLGVSSSPS*VSSSPA
Trigger: GGCCGGAGACGAACTCACCAAGCTGGGCGAGGAGGA...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCACAGGCTTCCAAAAGCTaGCTTCAGGCTCTGAGGAGC +
Preference number: 5 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPQASKS*LQALRS
Trigger: GCTCCTCAGAGCCTGAAGCAAGCTTTTGGAAGCCTG...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS GCA 90 bp TCCACTTTGTCCTGCAGCTTCTTTTGCTGCTCAGGTGTGACCGATTaGTCCGTCTTGCTGTTCATCTCCCGTGTCATGGCCAGCTTTTCC +
Preference number: 5 (lower is better)
Translates to: STLSCSFFCCSGVTD*SVLLFISRVMASFS
Trigger: GGAAAAGCTGGCCATGACACGGGAGATGAACAGCAAGACGGAGCAATCGGTCACACCTGAGCAGCAAAAGAAGCTGCAGGACAAAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TGTTGTGATGTTGGGCTAAGTCCTAAGACTGTTACCTACCCTGGGGCCACCCCACTCAGGTGTGACCGATaGCTCCGTCTTGCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: CCDVGLSPKTVTYPGATPLRCDR*LRLAVH
Trigger: ATGAACAGCAAGACGGAGCAATCGGTCACACCTGAG...TGGGGTGGCCCCAGGGTAGGTAACAGTCTTAGGACTTAGCCCAACATCACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGGTCCTGCAGCTTCTTTaGCTGCTCAGGTGTGACCGA +
Preference number: 5 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKVLQLL*LLRCDR
Trigger: TCGGTCACACCTGAGCAGCAAAAGAAGCTGCAGGAC...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp GGAGGGCATCTGCGGTCCAGAGGCCTAGAAGTGGCATCCACTGTAAGCAAGTCTTTGCACTTGTCCACTTaGTCCTGCAGCTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: GGHLRSRGLEVASTVSKSLHLST*SCSFFC
Trigger: GCAAAAGAAGCTGCAGGACAAAGTGGACAAGTGCAA...AGACTTGCTTACAGTGGATGCCACTTCTAGGCCTCTGGACCGCAGATGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCCAGCAGGGAGAATGTaGTTCTGGGGGCCGTGGGGA +
Preference number: 5 (lower is better)
Translates to: YTIMYKTGALLRPQHFSEPAGRM*FWGPWG
Trigger: TCCCCACGGCCCCCAGAACAACATTCTCCCTGCTGG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATTCCTCATTCAGCAGATaGTTCTTCACCTCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHSSFSR*FFTSWC
Trigger: GCACCAGGAGGTGAAGAACAATCTGCTGAATGAGGA...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTGCCTCCTTCGTCTCCTaGAAGCCACCCATGATCTGC +
Preference number: 5 (lower is better)
Translates to: HNHVQNRCIAETTALLGVASFVS*KPPMIC
Trigger: GCAGATCATGGGTGGCTTCAAGGAGACGAAGGAGGC...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGACAGAGGAATGGTTAGGCCAAGAGCCTTGCAGGTACAAGGCTTGGCCTCATTTGCACTTGTCCACTTaGTCCTGCAGCTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: RTEEWLGQEPCRYKAWPHLHLST*SCSFFC
Trigger: GCAAAAGAAGCTGCAGGACAAAGTGGACAAGTGCAA...ATGAGGCCAAGCCTTGTACCTGCAAGGCTCTTGGCCTAACCATTCCTCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATCTGTTCTCAGCCAGGTaGAGGTGCCGTTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: GLASWRLMWNPVILWFLDLFSAR*RCRLMS
Trigger: GGACATCAAACGGCACCTCAACCTGGCTGAGAACAG...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATCAGGTCCTCTGCAAGTaGCTGAGGGGGTTTGGATCT +
Preference number: 5 (lower is better)
Translates to: GLASWRLMWNPVILWFLDQVLCK*LRGFGS
Trigger: AGATCCAAACCCCCTCAGCAACTTGCAGAGGACCTG...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCGCCCTCATGGGGTTTaGTCCAACCCTGGTCTGCTT +
Preference number: 5 (lower is better)
Translates to: YTIMYKTGALLRPQHFSERPHGV*SNPGLL
Trigger: AAGCAGACCAGGGTTGGACAAAACCCCATGAGGGCG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTCAGTTCATCAGGTCGTaGCATAGACGGTGGCCGTCA +
Preference number: 5 (lower is better)
Translates to: HNHVQNRCIAETTALLGVQFIRS*HRRWPS
Trigger: TGACGGCCACCGTCTATGCAACGACCTGATGAACTG...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp CACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGTTACCGATTGCTCCGTCTaGCTGTTCATCTCCCGTGTC +
Preference number: 5 (lower is better)
Translates to: HNHVQNRCIAETTALLGVTDCSV*LFISRV
Trigger: GACACGGGAGATGAACAGCAAGACGGAGCAATCGGT...AACTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp AGGGGGTTTGGATCTGCTGAAGAGCCGATGCTGAAAGTGCTGATAGCTGGAAAGTTGCACTTGTCCACTTaGTCCTGCAGCTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: RGFGSAEEPMLKVLIAGKLHLST*SCSFFC
Trigger: GCAAAAGAAGCTGCAGGACAAAGTGGACAAGTGCAA...CTTTCCAGCTATCAGCACTTTCAGCATCGGCTCTTCAGCAGATCCAAACCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp GGCTTGGCCTCATGGAGGCTGATGTGGAACCCAGTGATTTTATGGTTTTTGGATACATCCTGCTTGCACTaGTCCACTTTGTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GLASWRLMWNPVILWFLDTSCLH*STLSCS
Trigger: GCTGCAGGACAAAGTGGACAAGTGCAAGCAGGATGT...ATCCAAAAACCATAAAATCACTGGGTTCCACATCAGCCTCCATGAGGCCAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGCTGTTCTCAGCCAGGTaGAGGTGCCGTTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: YTIMYKTGALLRPQHFSELFSAR*RCRLMS
Trigger: GGACATCAAACGGCACCTCAACCTGGCTGAGAACAG...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS-3UTR CAA 90 bp TACACAATCATGTACAAAACAGGTGCATTGCTGAGACCACAGCACTTCTCGGAGACATCCTGCTTGCACTaGTCCACTTTGTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: YTIMYKTGALLRPQHFSETSCLH*STLSCS
Trigger: GCTGCAGGACAAAGTGGACAAGTGCAAGCAGGATGT...CTCCGAGAAGTGCTGTGGTCTCAGCAATGCACCTGTTTTGTACATGATTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS CCA 72 bp GACCATCGGCGGCGACTCGGGGCGAAGCGGGACGTCTaGGGCCCGGCCTCAAGCCCGGCCGACTTCCCGGGG +
Preference number: 6 (lower is better)
Translates to: DHRRRLGAKRDV*GPASSPADFPG
Trigger: CCCCGGGAAGTCGGCCGGGCTTGAGGCCGGGCCCCAGACGTCCCGCTTCGCCCCGAGTCGCCGCCGATGGTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000620693.4
CDS CCA 72 bp GGCTGCTCATGCACTGGGCCCGTGTGGGCACCAAGCTaGGGGCAAGTAGGAGCTTACTGCCCCCGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: GCSCTGPVWAPS*GQVGAYCPRWA
Trigger: GGCCCAGCGGGGGCAGTAAGCTCCTACTTGCCCCCAGCTTGGTGCCCACACGGGCCCAGTGCATGAGCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000486120.5
ENST00000487760.1
ENST00000538621.2
CDS CCA 72 bp CGTCATAGTCGTAGAGTGCCCGCACGCGCACTCCCTTaGAGTCGTCCTCAAAGGGGTTGGCGCCCCCGTTGG +
Preference number: 6 (lower is better)
Translates to: RHSRRVPARALP*SRPQRGWRPRW
Trigger: CCAACGGGGGCGCCAACCCCTTTGAGGACGACTCCAAGGGAGTGCGCGTGCGGGCACTCTACGACTATGACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS TCA 72 bp CTCACTGCCCCCAAAGGGGTTCCCACTCTCGTCGTCTaGCCACTCGGTGGCGTAGGGCTGGCCTCTGTCGTA +
Preference number: 6 (lower is better)
Translates to: LTAPKGVPTLVV*PLGGVGLASVV
Trigger: TACGACAGAGGCCAGCCCTACGCCACCGAGTGGTCAGACGACGAGAGTGGGAACCCCTTTGGGGGCAGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS CCA 72 bp CTGGCGCCAGTGAGGCCTCATCGTAGGAGCTGGACATaGTGTAGCCGCAGGGGGATGGACAAGTGCGGAGCT +
Preference number: 6 (lower is better)
Translates to: LAPVRPHRRSWT*CSRRGMDKCGA
Trigger: AGCTCCGCACTTGTCCATCCCCCTGCGGCTACACCATGTCCAGCTCCTACGATGAGGCCTCACTGGCGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000487760.1
ENST00000493633.5
ENST00000538621.2
ENST00000620693.4
CDS CAA 90 bp CCGCGGTCCCCAGCCTGGGATGTGGACTCTACCGCCCCAGTGGCATaGGTCAGCGCCACTCCCTCTGCCTTCTTAGGCTGTTTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: PRSPAWDVDSTAPVA*VSATPSAFLGCFSF
Trigger: GAAGGAGAAACAGCCTAAGAAGGCAGAGGGAGTGGCGCTGACCAATGCCACTGGGGCGGTAGAGTCCACATCCCAGGCTGGGGACCGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS TCA 72 bp CTCCCAGAAGCTGTCGGTGGTCTCCTCTGGCGCCAGTaGGGCCTCATCGTAGGAGCTGGACATGGTGTAGCC +
Preference number: 6 (lower is better)
Translates to: LPEAVGGLLWRQ*GLIVGAGHGVA
Trigger: GGCTACACCATGTCCAGCTCCTACGATGAGGCCTCACTGGCGCCAGAGGAGACCACCGACAGCTTCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000487760.1
ENST00000493633.5
ENST00000538621.2
ENST00000620693.4
CDS GCA 72 bp GAGCTCGTCCTGCTCCTGGCCGTCATAGTCGTAGAGTaGCCGCACGCGCACTCCCTTGGAGTCGTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: ELVLLLAVIVVE*PHAHSLGVVLK
Trigger: TTTGAGGACGACTCCAAGGGAGTGCGCGTGCGGGCACTCTACGACTATGACGGCCAGGAGCAGGACGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS CCA 72 bp ATCGTAGGAGCTGGACATGGTGTAGCCGCAGGGGGATaGACAAGTGCGGAGCTGCGGTTAGCAGGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: IVGAGHGVAAGG*TSAELRLAGSA
Trigger: AGCCGAGCCTGCTAACCGCAGCTCCGCACTTGTCCATCCCCCTGCGGCTACACCATGTCCAGCTCCTACGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000487760.1
ENST00000493633.5
ENST00000538621.2
ENST00000620693.4
CDS CCA 72 bp TCTCCTCTGGCGCCAGTGAGGCCTCATCGTAGGAGCTaGACATGGTGTAGCCGCAGGGGGATGGACAAGTGC +
Preference number: 6 (lower is better)
Translates to: SPLAPVRPHRRS*TWCSRRGMDKC
Trigger: GCACTTGTCCATCCCCCTGCGGCTACACCATGTCCAGCTCCTACGATGAGGCCTCACTGGCGCCAGAGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000487760.1
ENST00000493633.5
ENST00000538621.2
ENST00000620693.4
CDS CCA 72 bp TCCGCTTGTAGTTCCCCACCTCCCAGAAGCTGTCGGTaGTCTCCTCTGGCGCCAGTGAGGCCTCATCGTAGG +
Preference number: 6 (lower is better)
Translates to: SACSSPPPRSCR*SPLAPVRPHRR
Trigger: CCTACGATGAGGCCTCACTGGCGCCAGAGGAGACCACCGACAGCTTCTGGGAGGTGGGGAACTACAAGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000487760.1
ENST00000493633.5
ENST00000538621.2
ENST00000620693.4
CDS CAA 72 bp CCAGCCTGGGATGTGGACTCTACCGCCCCAGTGGCATaGGTCAGCGCCACTCCCTCTGCCTTCTTAGGCTGT +
Preference number: 6 (lower is better)
Translates to: PAWDVDSTAPVA*VSATPSAFLGC
Trigger: ACAGCCTAAGAAGGCAGAGGGAGTGGCGCTGACCAATGCCACTGGGGCGGTAGAGTCCACATCCCAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS GCA 72 bp TCTTGGCGCGCTCCTGCACGCAGTTCATCAGGTCGTTaGATAGACGGTGGCCGTCATCGATGCGCTTCACGG +
Preference number: 6 (lower is better)
Translates to: SWRAPARSSSGR*IDGGRHRCASR
Trigger: CCGTGAAGCGCATCGATGACGGCCACCGTCTATGCAACGACCTGATGAACTGCGTGCAGGAGCGCGCCAAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000487760.1
ENST00000493633.5
ENST00000538621.2
ENST00000620693.4
CDS CAA 90 bp GGCTCGGCTGCTCATGCACAATCTGAGAACAGGATCGCTGTGCCTTaGGGCCCCAACCTGTTGACTCATCCTCACCTCCAACCACTCCCC +
Preference number: 6 (lower is better)
Translates to: GSAAHAQSENRIAVP*GPNLLTHPHLQPLP
Trigger: GGGGAGTGGTTGGAGGTGAGGATGAGTCAACAGGTTGGGGCCCAAAGGCACAGCGATCCTGTTCTCAGATTGTGCATGAGCAGCCGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493633.5
CDS GCA 72 bp TACCGCCCCAGTGGCATTGGTCAGCGCCACTCCCTCTaGCTTCTTAGGCTGTTTCTCCTTCTTGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: YRPSGIGQRHSL*LLRLFLLLGGG
Trigger: ACCACCACCAAGAAGGAGAAACAGCCTAAGAAGGCAGAGGGAGTGGCGCTGACCAATGCCACTGGGGCGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS CAA 72 bp AGGTTGAGGTGCCGTTTGATGTCCAGCAGCACCTCCTaGAGGAAGACCAGCCGCTTTTCCTCAAATTGCTGG +
Preference number: 6 (lower is better)
Translates to: RLRCRLMSSSTS*RKTSRFSSNCW
Trigger: CCAGCAATTTGAGGAAAAGCGGCTGGTCTTCCTCAAGGAGGTGCTGCTGGACATCAAACGGCACCTCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS CAA 72 bp GCTCATGCACAATCTGAGAACAGGATCGCTGTGCCTTaGGGCCCCAACCTGTTGACTCATCCTCACCTCCAA +
Preference number: 6 (lower is better)
Translates to: AHAQSENRIAVP*GPNLLTHPHLQ
Trigger: TTGGAGGTGAGGATGAGTCAACAGGTTGGGGCCCAAAGGCACAGCGATCCTGTTCTCAGATTGTGCATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493633.5
CDS CAA 90 bp GTCCACTTTGTCCTGCAGCTTCTTTTGCTGCTCAGGTGTGACCGATaGCTCCGTCTTGCTGTTCATCTCCCGTGTCATGGCCAGCTTTTC +
Preference number: 6 (lower is better)
Translates to: VHFVLQLLLLLRCDR*LRLAVHLPCHGQLF
Trigger: GAAAAGCTGGCCATGACACGGGAGATGAACAGCAAGACGGAGCAATCGGTCACACCTGAGCAGCAAAAGAAGCTGCAGGACAAAGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000538621.2
ENST00000620693.4
CDS CAA 90 bp TTCTCAGCCAGGTTGAGGTGCCGTTTGATGTCCAGCAGCACCTCCTaGAGGAAGACCAGCCGCTTTTCCTCAAATTGCTGGCATTGCTCA +
Preference number: 6 (lower is better)
Translates to: FSARLRCRLMSSSTS*RKTSRFSSNCWHCS
Trigger: TGAGCAATGCCAGCAATTTGAGGAAAAGCGGCTGGTCTTCCTCAAGGAGGTGCTGCTGGACATCAAACGGCACCTCAACCTGGCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000538621.2
ENST00000620693.4
CDS GCA 72 bp TGTTCATCTCCCGTGTCATGGCCAGCTTTTCCTCTTTaGAAGCCAAATGGTAGGCCTTCTTGGCTGCCTCCA +
Preference number: 6 (lower is better)
Translates to: CSSPVSWPAFPL*KPNGRPSWLPP
Trigger: TGGAGGCAGCCAAGAAGGCCTACCATTTGGCTTGCAAAGAGGAAAAGCTGGCCATGACACGGGAGATGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000538621.2
ENST00000620693.4
CDS CAA 72 bp TTCTTTTGCTGCTCAGGTGTGACCGATTGCTCCGTCTaGCTGTTCATCTCCCGTGTCATGGCCAGCTTTTCC +
Preference number: 6 (lower is better)
Translates to: FFCCSGVTDCSV*LFISRVMASFS
Trigger: GGAAAAGCTGGCCATGACACGGGAGATGAACAGCAAGACGGAGCAATCGGTCACACCTGAGCAGCAAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000244458.7
ENST00000374043.6
ENST00000486120.5
ENST00000538621.2
ENST00000620693.4
CDS TCA 72 bp ATTGTACAAAATAGAGATGAACAGGTAGGCCTGGTTTaGTCTAGGAGGGAACAGCGCCTGAAAATGTCCTGT +
Preference number: 6 (lower is better)
Translates to: IVQNRDEQVGLV*SRREQRLKMSC
Trigger: ACAGGACATTTTCAGGCGCTGTTCCCTCCTAGATCAAACCAGGCCTACCTGTTCATCTCTATTTTGTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487760.1
ENST00000493633.5