Pregenerated sensors for PABPC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000070756Ensembl transcript IDs: ENST00000517921.2, ENST00000518293.5, ENST00000520142.2, ENST00000520804.2, ENST00000521865.6, ENST00000522720.2, ENST00000523555.6, ENST00000676662.1, ENST00000676976.1, ENST00000677140.1, ENST00000677285.1, ENST00000677380.1, ENST00000677478.1, ENST00000677765.1, ENST00000677775.1, ENST00000677787.1, ENST00000677892.1, ENST00000678290.1, ENST00000678954.1
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACGGAAGGAGCTCAGCGTTCAACGCCCCAGAATCCCGGGGCCACTaGCGGGAGCGCCGCGGAGGAACCGAATCTCACCCACCCTCCCGG | + |
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Preference number: 1 (lower is better) Translates to: HGRSSAFNAPESRGH*RERRGGTESHPPSR Trigger: CCGGGAGGGTGGGTGAGATTCGGTTCCTCCGCGGCGCTCCCGCCAGTGGCCCCGGGATTCTGGGGCGTTGAACGCTGAGCTCCTTCCGTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| 3UTR CCA 90 bp | CCACCACACCACACATCGCCACAGGAACTTTATCCTAAGGCCTGGTaGCTCCCCCAGGCGACTGGGCCAGGAGCAGGAGCAGAAGCAGGC | + |
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Preference number: 1 (lower is better) Translates to: PPHHTSPQELYPKAW*LPQATGPGAGAEAG Trigger: GCCTGCTTCTGCTCCTGCTCCTGGCCCAGTCGCCTGGGGGAGCCACCAGGCCTTAGGATAAAGTTCCTGTGGCGATGTGTGGTGTGGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| 3UTR CCA 90 bp | CCACCACCACACCACACATCGCCACAGGAACTTTATCCTAAGGCCTaGTGGCTCCCCCAGGCGACTGGGCCAGGAGCAGGAGCAGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: PPPHHTSPQELYPKA*WLPQATGPGAGAEA Trigger: TGCTTCTGCTCCTGCTCCTGGCCCAGTCGCCTGGGGGAGCCACCAGGCCTTAGGATAAAGTTCCTGTGGCGATGTGTGGTGTGGTGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| 3UTR CCA 90 bp | AGCAGAAGCAGGCCTCGGGCCTGCGAGGTTACAGGGTTCAACACGTaGTATTTTTCGAGCACAGAACTGCACTTCCTCCCCAGGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: SRSRPRACEVTGFNT*YFSSTELHFLPRLG Trigger: CCCCAGCCTGGGGAGGAAGTGCAGTTCTGTGCTCGAAAAATACCACGTGTTGAACCCTGTAACCTCGCAGGCCCGAGGCCTGCTTCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGCGAGGTTACAGGGTTCAACACGTGGTATTTTTCGAGCACAGAACTGCAGGCAGGAGCTCCGGGTaGTGGGAGCGCCTCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: GLRGYRVQHVVFFEHRTAGRSSG*WERLHL Trigger: GAGGTGGAGGCGCTCCCACCACCCGGAGCTCCTGCC...TGCAGTTCTGTGCTCGAAAAATACCACGTGTTGAACCCTGTAACCTCGCAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| 3UTR-3UTR CCA 90 bp | TTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATTAGAATCCCGGGGCCACTaGCGGGAGCGCCGCGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FLCRLSTIKILPIYAWQLESRGH*RERRGG Trigger: TCCTCCGCGGCGCTCCCGCCAGTGGCCCCGGGATTC...TAATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| 3UTR-3UTR TCA 90 bp | GATTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATGCACGCTCCGAAGCCTaGGGACCACCACCACACCAC | + |
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Preference number: 2 (lower is better) Translates to: DSYVGSAPLRYYLFMHGNARSEA*GPPPHH Trigger: GTGGTGTGGTGGTGGTCCTCAGGCTTCGGAGCGTGC...ATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAATAAGCCTTATGCTTATGCTTGAGCCCAGGAATTCGAGACCAGCCTGGGCTTATCTTCAAAAGTaGATGGGTGTCAGTCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: AGISLMLMLEPRNSRPAWAYLQK*MGVSLV Trigger: TACAAGACTGACACCCATCCACTTTTGAAGATAAGC...CCAGGCTGGTCTCGAATTCCTGGGCTCAAGCATAAGCATAAGGCTTATTCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| 3UTR-3UTR CCA 90 bp | TTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATTACTTTATCCTAAGGCCTaGTGGCTCCCCCAGGCGACT | + |
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Preference number: 2 (lower is better) Translates to: FLCRLSTIKILPIYAWQLLYPKA*WLPQAT Trigger: AGTCGCCTGGGGGAGCCACCAGGCCTTAGGATAAAG...TAATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| 3UTR-3UTR GCA 90 bp | TTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATTATTTCGAGCACAGAACTaGACTTCCTCCCCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FLCRLSTIKILPIYAWQLFRAQN*TSSPGW Trigger: CCAGCCTGGGGAGGAAGTGCAGTTCTGTGCTCGAAA...TAATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGAACTGCTCCAAAGTGAATGAGCAATTCTTACGTTTTAGGCATGACAATGCGGTGTCATGGTTATaGAGGAGAATGTCCTTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LKNCSKVNEQFLRFRHDNAVSWL*RRMSLF Trigger: AAACAAGGACATTCTCCTCCATAACCATGACACCGC...ATTGTCATGCCTAAAACGTAAGAATTGCTCATTCACTTTGGAGCAGTTCTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518293.5 |
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| 3UTR CCA 72 bp | AGCTCAGCGTTCAACGCCCCAGAATCCCGGGGCCACTaGCGGGAGCGCCGCGGAGGAACCGAATCTCACCCA | + |
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Preference number: 3 (lower is better) Translates to: SSAFNAPESRGH*RERRGGTESHP Trigger: TGGGTGAGATTCGGTTCCTCCGCGGCGCTCCCGCCAGTGGCCCCGGGATTCTGGGGCGTTGAACGCTGAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| 3UTR CCA 72 bp | CACCACACATCGCCACAGGAACTTTATCCTAAGGCCTaGTGGCTCCCCCAGGCGACTGGGCCAGGAGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: HHTSPQELYPKA*WLPQATGPGAG Trigger: TCCTGCTCCTGGCCCAGTCGCCTGGGGGAGCCACCAGGCCTTAGGATAAAGTTCCTGTGGCGATGTGTGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| 3UTR CCA 72 bp | AGGCCTCGGGCCTGCGAGGTTACAGGGTTCAACACGTaGTATTTTTCGAGCACAGAACTGCACTTCCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: RPRACEVTGFNT*YFSSTELHFLP Trigger: GGGGAGGAAGTGCAGTTCTGTGCTCGAAAAATACCACGTGTTGAACCCTGTAACCTCGCAGGCCCGAGGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| 3UTR-3UTR CAA 90 bp | GGCATGGTGGCTTATGCAGGAATAAGCCTTATGCTTATGCTTGAGCCCAGGAATAATGCACTACAGGAATaGTCTTGTGCCTTTTACATA | + |
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Preference number: 3 (lower is better) Translates to: GMVAYAGISLMLMLEPRNNALQE*SCAFYI Trigger: TATGTAAAAGGCACAAGACAATTCCTGTAGTGCATT...ATTCCTGGGCTCAAGCATAAGCATAAGGCTTATTCCTGCATAAGCCACCATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| 3UTR-3UTR CAA 90 bp | ATCAAGGATAGACTGAAGAACTGCTCCAAAGTGAATGAGCAATTCTTACGTTTTCTACGGAGGACATTATaGAAGCAATCAAGGAACTTG | + |
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Preference number: 3 (lower is better) Translates to: IKDRLKNCSKVNEQFLRFLRRTL*KQSRNL Trigger: CAAGTTCCTTGATTGCTTCAATAATGTCCTCCGTAG...AAAACGTAAGAATTGCTCATTCACTTTGGAGCAGTTCTTCAGTCTATCCTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518293.5 |
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| CDS-3UTR CCA 90 bp | ACGCCCCAGAATCCCGGGGCCACTGGCGGGAGCGCCGCGGAGGAACCGAATCTCGAATCCCGGGGCCACTaGCGGGAGCGCCGCGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: TPQNPGATGGSAAEEPNLESRGH*RERRGG Trigger: TCCTCCGCGGCGCTCCCGCCAGTGGCCCCGGGATTC...GAGATTCGGTTCCTCCGCGGCGCTCCCGCCAGTGGCCCCGGGATTCTGGGGCGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| CDS-3UTR CCA 90 bp | ACGCCCCAGAATCCCGGGGCCACTGGCGGGAGCGCCGCGGAGGAACCGAATCTCGGCAGGAGCTCCGGGTaGTGGGAGCGCCTCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPQNPGATGGSAAEEPNLGRSSG*WERLHL Trigger: GAGGTGGAGGCGCTCCCACCACCCGGAGCTCCTGCC...GAGATTCGGTTCCTCCGCGGCGCTCCCGCCAGTGGCCCCGGGATTCTGGGGCGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| CDS-3UTR TCA 90 bp | AGCTCAGCGTTCAACGCCCCAGAATCCCGGGGCCACTGGCGGGAGCGCCGCGGAGCACGCTCCGAAGCCTaGGGACCACCACCACACCAC | + |
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Preference number: 4 (lower is better) Translates to: SSAFNAPESRGHWRERRGARSEA*GPPPHH Trigger: GTGGTGTGGTGGTGGTCCTCAGGCTTCGGAGCGTGC...TCCGCGGCGCTCCCGCCAGTGGCCCCGGGATTCTGGGGCGTTGAACGCTGAGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| CDS-3UTR GCA 90 bp | AGCTCAGCGTTCAACGCCCCAGAATCCCGGGGCCACTGGCGGGAGCGCCGCGGATTTCGAGCACAGAACTaGACTTCCTCCCCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSAFNAPESRGHWRERRGFRAQN*TSSPGW Trigger: CCAGCCTGGGGAGGAAGTGCAGTTCTGTGCTCGAAA...TCCGCGGCGCTCCCGCCAGTGGCCCCGGGATTCTGGGGCGTTGAACGCTGAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| CDS-3UTR TCA 90 bp | ACGCCCCAGAATCCCGGGGCCACTGGCGGGAGCGCCGCGGAGGAACCGAATCTCAAGTTTGAGAGCGTCTaGGGCCGAGAAAATGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TPQNPGATGGSAAEEPNLKFESV*GRENGR Trigger: GCGACCATTTTCTCGGCCTCAGACGCTCTCAAACTT...GAGATTCGGTTCCTCCGCGGCGCTCCCGCCAGTGGCCCCGGGATTCTGGGGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| CDS-3UTR GCA 90 bp | GGAGCGCCTCCACCTCTTACCCACGGAAGGAGCTCAGCGTTCAACGCCCCAGAATGCAGCGGCTGCAGCTaGAGGACGTGGACCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: GAPPPLTHGRSSAFNAPECSGCS*RTWTHC Trigger: ACAATGGGTCCACGTCCTGCAGCTGCAGCCGCTGCA...TTCTGGGGCGTTGAACGCTGAGCTCCTTCCGTGGGTAAGAGGTGGAGGCGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| CDS-3UTR CCA 90 bp | ACGCCCCAGAATCCCGGGGCCACTGGCGGGAGCGCCGCGGAGGAACCGAATCTCACAGGGTTCAACACGTaGTATTTTTCGAGCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: TPQNPGATGGSAAEEPNLTGFNT*YFSSTE Trigger: TTCTGTGCTCGAAAAATACCACGTGTTGAACCCTGT...GAGATTCGGTTCCTCCGCGGCGCTCCCGCCAGTGGCCCCGGGATTCTGGGGCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| CDS-3UTR CCA 90 bp | GGCCTGCGAGGTTACAGGGTTCAACACGTGGTATTTTTCGAGCACAGAACTGCAAGGAGCTCCGGGTGGTaGGAGCGCCTCCACCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: GLRGYRVQHVVFFEHRTARSSGW*ERLHLL Trigger: TAAGAGGTGGAGGCGCTCCCACCACCCGGAGCTCCT...TGCAGTTCTGTGCTCGAAAAATACCACGTGTTGAACCCTGTAACCTCGCAGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| CDS-3UTR CCA 90 bp | GGCCTGCGAGGTTACAGGGTTCAACACGTGGTATTTTTCGAGCACAGAACTGCATATCCTAAGGCCTGGTaGCTCCCCCAGGCGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: GLRGYRVQHVVFFEHRTAYPKAW*LPQATG Trigger: CCCAGTCGCCTGGGGGAGCCACCAGGCCTTAGGATA...TGCAGTTCTGTGCTCGAAAAATACCACGTGTTGAACCCTGTAACCTCGCAGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| CDS-3UTR GCA 90 bp | GCAGGAATAAGCCTTATGCTTATGCTTGAGCCCAGGAATTCGAGACCAGCCTGGTGCAGCGGCTGCAGCTaGAGGACGTGGACCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: AGISLMLMLEPRNSRPAWCSGCS*RTWTHC Trigger: ACAATGGGTCCACGTCCTGCAGCTGCAGCCGCTGCA...CCAGGCTGGTCTCGAATTCCTGGGCTCAAGCATAAGCATAAGGCTTATTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR TCA 90 bp | GCAGGAATAAGCCTTATGCTTATGCTTGAGCCCAGGAATTCGAGACCAGCCTGGAAGTTTGAGAGCGTCTaGGGCCGAGAAAATGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: AGISLMLMLEPRNSRPAWKFESV*GRENGR Trigger: GCGACCATTTTCTCGGCCTCAGACGCTCTCAAACTT...CCAGGCTGGTCTCGAATTCCTGGGCTCAAGCATAAGCATAAGGCTTATTCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676662.1 |
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| CDS-3UTR TCA 90 bp | GCAGGAATAAGCCTTATGCTTATGCTTGAGCCCAGGAATTCGAGACCAGCCTGGCATCACCCTAAAGTTTaGGAGCGTCTGAGGCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: AGISLMLMLEPRNSRPAWHHPKV*ERLRPR Trigger: TCTCGGCCTCAGACGCTCTCAAACTTTAGGGTGATG...CCAGGCTGGTCTCGAATTCCTGGGCTCAAGCATAAGCATAAGGCTTATTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000676662.1 ENST00000677765.1 |
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| CDS-3UTR CCA 90 bp | GATTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATACTTCCTCCCCAGGCTaGGGCGCCGGCAGGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DSYVGSAPLRYYLFMHGNTSSPG*GAGRSS Trigger: GGAGCTCCTGCCGGCGCCCCAGCCTGGGGAGGAAGT...ATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| CDS-3UTR TCA 90 bp | GATTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATCCAAGGAGCGGCGGGTaGTCATGTCCGGCCGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: DSYVGSAPLRYYLFMHGNPRSGG*SCPAAE Trigger: TTCTGCGGCCGGACATGATCACCCGCCGCTCCTTGG...ATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677478.1 |
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| CDS-3UTR GCA 90 bp | GATTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATTGCAGCGGCTGCAGCTaGAGGACGTGGACCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: DSYVGSAPLRYYLFMHGNCSGCS*RTWTHC Trigger: ACAATGGGTCCACGTCCTGCAGCTGCAGCCGCTGCA...ATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000520142.2 ENST00000520804.2 ENST00000521865.6 ENST00000522720.2 ENST00000676662.1 ENST00000677140.1 ENST00000677380.1 ENST00000677478.1 ENST00000677765.1 ENST00000677787.1 ENST00000678954.1 |
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| CDS-3UTR GCA 90 bp | GGCATGGTGGCTTATGCAGGAATAAGCCTTATGCTTATGCTTGAGCCCAGGAATAGGCATGGTGGCTTATaGAGGAATAAGCCTTATGCT | + |
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Preference number: 4 (lower is better) Translates to: GMVAYAGISLMLMLEPRNRHGGL*RNKPYA Trigger: AGCATAAGGCTTATTCCTGCATAAGCCACCATGCCT...ATTCCTGGGCTCAAGCATAAGCATAAGGCTTATTCCTGCATAAGCCACCATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR GCA 90 bp | GCAGGAATAAGCCTTATGCTTATGCTTGAGCCCAGGAATTCGAGACCAGCCTGGGGGTTATCAGTTTTATaGAGATACCCTATACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: AGISLMLMLEPRNSRPAWGLSVL*RYPILQ Trigger: CTGGAGTATAGGGTATCTGCATAAAACTGATAACCC...CCAGGCTGGTCTCGAATTCCTGGGCTCAAGCATAAGCATAAGGCTTATTCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR GCA 90 bp | GATTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATAGCAGGCCTCGGGCCTaGGAGGTTACAGGGTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: DSYVGSAPLRYYLFMHGNSRPRA*EVTGFN Trigger: GTTGAACCCTGTAACCTCGCAGGCCCGAGGCCTGCT...ATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678954.1 |
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| CDS-3UTR TCA 90 bp | GCAGGAATAAGCCTTATGCTTATGCTTGAGCCCAGGAATTCGAGACCAGCCTGGTTGTTTAGCATGGAATaGGATAACCACACGTTTAAC | + |
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Preference number: 4 (lower is better) Translates to: AGISLMLMLEPRNSRPAWLFSME*DNHTFN Trigger: GTTAAACGTGTGGTTATCTCATTCCATGCTAAACAA...CCAGGCTGGTCTCGAATTCCTGGGCTCAAGCATAAGCATAAGGCTTATTCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR GCA 90 bp | TTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATTATGCAGCGGCTGCAGCTaGAGGACGTGGACCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: FLCRLSTIKILPIYAWQLCSGCS*RTWTHC Trigger: ACAATGGGTCCACGTCCTGCAGCTGCAGCCGCTGCA...TAATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000520142.2 ENST00000520804.2 ENST00000521865.6 ENST00000522720.2 ENST00000676662.1 ENST00000677140.1 ENST00000677380.1 ENST00000677478.1 ENST00000677765.1 ENST00000677787.1 ENST00000678954.1 |
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| CDS-3UTR GCA 90 bp | GATTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATGGAAGCACCGCCTCCTaGACCCTCTACTTATACCCC | + |
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Preference number: 4 (lower is better) Translates to: DSYVGSAPLRYYLFMHGNGSTAS*TLYLYP Trigger: GGGGTATAAGTAGAGGGTGCAGGAGGCGGTGCTTCC...ATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677380.1 ENST00000677478.1 |
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| CDS-3UTR CCA 90 bp | GGCATGGTGGCTTATGCAGGAATAAGCCTTATGCTTATGCTTGAGCCCAGGAATGCTTATCTTCAAAAGTaGATGGGTGTCAGTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: GMVAYAGISLMLMLEPRNAYLQK*MGVSLV Trigger: TACAAGACTGACACCCATCCACTTTTGAAGATAAGC...ATTCCTGGGCTCAAGCATAAGCATAAGGCTTATTCCTGCATAAGCCACCATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR TCA 90 bp | GGCATGGTGGCTTATGCAGGAATAAGCCTTATGCTTATGCTTGAGCCCAGGAATTTGTTTAGCATGGAATaGGATAACCACACGTTTAAC | + |
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Preference number: 4 (lower is better) Translates to: GMVAYAGISLMLMLEPRNLFSME*DNHTFN Trigger: GTTAAACGTGTGGTTATCTCATTCCATGCTAAACAA...ATTCCTGGGCTCAAGCATAAGCATAAGGCTTATTCCTGCATAAGCCACCATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR TCA 90 bp | TTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATTACATCACCCTAAAGTTTaGGAGCGTCTGAGGCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: FLCRLSTIKILPIYAWQLHHPKV*ERLRPR Trigger: TCTCGGCCTCAGACGCTCTCAAACTTTAGGGTGATG...TAATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000676662.1 ENST00000677765.1 ENST00000678954.1 |
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| CDS-3UTR CCA 90 bp | ATGTTCAAAAGTGTCAAGGTCATGAAAATCAAGGATAGACTGAAGAACTGCTCCGCGGTGTCATGGTTATaGAGGAGAATGTCCTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: MFKSVKVMKIKDRLKNCSAVSWL*RRMSLF Trigger: AAACAAGGACATTCTCCTCCATAACCATGACACCGC...GGAGCAGTTCTTCAGTCTATCCTTGATTTTCATGACCTTGACACTTTTGAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518293.5 |
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| CDS-3UTR GCA 90 bp | GATTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATAGGCATGGTGGCTTATaGAGGAATAAGCCTTATGCT | + |
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Preference number: 4 (lower is better) Translates to: DSYVGSAPLRYYLFMHGNRHGGL*RNKPYA Trigger: AGCATAAGGCTTATTCCTGCATAAGCCACCATGCCT...ATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR TCA 90 bp | ATGTTCAAAAGTGTCAAGGTCATGAAAATCAAGGATAGACTGAAGAACTGCTCCAGAACTGCTCCAAAGTaGATGAGCAATTCTTACGTT | + |
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Preference number: 4 (lower is better) Translates to: MFKSVKVMKIKDRLKNCSRTAPK*MSNSYV Trigger: AACGTAAGAATTGCTCATTCACTTTGGAGCAGTTCT...GGAGCAGTTCTTCAGTCTATCCTTGATTTTCATGACCTTGACACTTTTGAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518293.5 |
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| CDS-3UTR GCA 90 bp | TTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATTAAGGCATGGTGGCTTATaGAGGAATAAGCCTTATGCT | + |
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Preference number: 4 (lower is better) Translates to: FLCRLSTIKILPIYAWQLRHGGL*RNKPYA Trigger: AGCATAAGGCTTATTCCTGCATAAGCCACCATGCCT...TAATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR CCA 90 bp | GATTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATGCTTATCTTCAAAAGTaGATGGGTGTCAGTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: DSYVGSAPLRYYLFMHGNAYLQK*MGVSLV Trigger: TACAAGACTGACACCCATCCACTTTTGAAGATAAGC...ATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR GCA 90 bp | TTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATTAGGGTTATCAGTTTTATaGAGATACCCTATACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FLCRLSTIKILPIYAWQLGLSVL*RYPILQ Trigger: CTGGAGTATAGGGTATCTGCATAAAACTGATAACCC...TAATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR CCA 90 bp | TTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATTAGCTTATCTTCAAAAGTaGATGGGTGTCAGTCTTGTA | + |
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Preference number: 4 (lower is better) Translates to: FLCRLSTIKILPIYAWQLAYLQK*MGVSLV Trigger: TACAAGACTGACACCCATCCACTTTTGAAGATAAGC...TAATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR TCA 90 bp | TTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATTATTGTTTAGCATGGAATaGGATAACCACACGTTTAAC | + |
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Preference number: 4 (lower is better) Translates to: FLCRLSTIKILPIYAWQLLFSME*DNHTFN Trigger: GTTAAACGTGTGGTTATCTCATTCCATGCTAAACAA...TAATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR CCA 90 bp | GATTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATATTGTTTGTTTAGCATaGAATGAGATAACCACACGT | + |
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Preference number: 4 (lower is better) Translates to: DSYVGSAPLRYYLFMHGNIVCLA*NEITTR Trigger: ACGTGTGGTTATCTCATTCCATGCTAAACAAACAAT...ATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS GCA 90 bp | GGCCGAGAAAATGGTCGCAAAGGAGGAAGTAGCCGGGCGTGTGGCTaGCGGCAGCGCGGGTCCCCGCCGGCTCGGGAAACGCGGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GRENGRKGGSSRACG*RQRGSPPARETRLQ Trigger: CTGGAGCCGCGTTTCCCGAGCCGGCGGGGACCCGCGCTGCCGGCAGCCACACGCCCGGCTACTTCCTCCTTTGCGACCATTTTCTCGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000676662.1 ENST00000678954.1 |
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| CDS CCA 90 bp | GCCCCTGCCTCCACCAGGAGGAGCGTTAACCCGTCACCGCGGCGGTaGGCGGTGCAAAGGGCTTCCGGGTTCCTCCGCGCTAACCACCCC | + |
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Preference number: 5 (lower is better) Translates to: APASTRRSVNPSPRR*AVQRASGFLRANHP Trigger: GGGGTGGTTAGCGCGGAGGAACCCGGAAGCCCTTTGCACCGCCCACCGCCGCGGTGACGGGTTAACGCTCCTCCTGGTGGAGGCAGGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517921.2 ENST00000523555.6 |
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| CDS TCA 90 bp | CACCCACCCTCCCGGCGCGTCATCACCCTAAAGTTTGAGAGCGTCTaGGGCCGAGAAAATGGTCGCAAAGGAGGAAGTAGCCGGGCGTGT | + |
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Preference number: 5 (lower is better) Translates to: HPPSRRVITLKFESV*GRENGRKGGSSRAC Trigger: ACACGCCCGGCTACTTCCTCCTTTGCGACCATTTTCTCGGCCTCAGACGCTCTCAAACTTTAGGGTGATGACGCGCCGGGAGGGTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676662.1 ENST00000678954.1 |
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| CDS-3UTR CAA 90 bp | GCAGGAATAAGCCTTATGCTTATGCTTGAGCCCAGGAATTCGAGACCAGCCTGGAATGCACTACAGGAATaGTCTTGTGCCTTTTACATA | + |
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Preference number: 5 (lower is better) Translates to: AGISLMLMLEPRNSRPAWNALQE*SCAFYI Trigger: TATGTAAAAGGCACAAGACAATTCCTGTAGTGCATT...CCAGGCTGGTCTCGAATTCCTGGGCTCAAGCATAAGCATAAGGCTTATTCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS-3UTR CAA 90 bp | GCCACCAGACAGGATGTAATGAGAAGAATGCAATGTCAATTCTGTGATAGTTCCCTACGGAGGACATTATaGAAGCAATCAAGGAACTTG | + |
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Preference number: 5 (lower is better) Translates to: ATRQDVMRRMQCQFCDSSLRRTL*KQSRNL Trigger: CAAGTTCCTTGATTGCTTCAATAATGTCCTCCGTAG...GGAACTATCACAGAATTGACATTGCATTCTTCTCATTACATCCTGTCTGGTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518293.5 |
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| CDS GCA 90 bp | CCAGGACTATCACTTGTCAGTAGCAAATTAAAGCCCTTAGCCAAATaGAATGTGGTTGTTTTTATCCATAGTTTTACTGGAACACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: PGLSLVSSKLKPLAK*NVVVFIHSFTGTQP Trigger: TGGCTGTGTTCCAGTAAAACTATGGATAAAAACAACCACATTGCATTTGGCTAAGGGCTTTAATTTGCTACTGACAAGTGATAGTCCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000677285.1 |
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| CDS-3UTR CAA 90 bp | TTCTTATGTCGGCTCAGCACCATTAAGATATTACCTATTTATGCATGGCAATTAAATGCACTACAGGAATaGTCTTGTGCCTTTTACATA | + |
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Preference number: 5 (lower is better) Translates to: FLCRLSTIKILPIYAWQLNALQE*SCAFYI Trigger: TATGTAAAAGGCACAAGACAATTCCTGTAGTGCATT...TAATTGCCATGCATAAATAGGTAATATCTTAATGGTGCTGAGCCGACATAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676662.1 ENST00000677140.1 ENST00000677765.1 ENST00000677787.1 |
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| CDS CCA 72 bp | GGAAGCGGAGCCCGCGCTGCGTCGCGTCCGTGGGGGTaGGGAGGACGGCTCGCGGGCGGTCCTCGGGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GSGARAASRPWG*GGRLAGGPRGC Trigger: ACACCCCCGAGGACCGCCCGCGAGCCGTCCTCCCCACCCCCACGGACGCGACGCAGCGCGGGCTCCGCTTCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000517921.2 ENST00000523555.6 |
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| CDS GCA 72 bp | AATGGTCGCAAAGGAGGAAGTAGCCGGGCGTGTGGCTaGCGGCAGCGCGGGTCCCCGCCGGCTCGGGAAACG | + |
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Preference number: 6 (lower is better) Translates to: NGRKGGSSRACG*RQRGSPPARET Trigger: CGTTTCCCGAGCCGGCGGGGACCCGCGCTGCCGGCAGCCACACGCCCGGCTACTTCCTCCTTTGCGACCATT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676662.1 ENST00000678954.1 |
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| CDS GCA 72 bp | GGAGGAGCGTTAACCCGTCACCGCGGCGGTGGGCGGTaGAAAGGGCTTCCGGGTTCCTCCGCGCTAACCACC | + |
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Preference number: 6 (lower is better) Translates to: GGALTRHRGGGR*KGLPGSSALTT Trigger: GGTGGTTAGCGCGGAGGAACCCGGAAGCCCTTTGCACCGCCCACCGCCGCGGTGACGGGTTAACGCTCCTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517921.2 ENST00000523555.6 |
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| CDS CCA 72 bp | TCCACCAGGAGGAGCGTTAACCCGTCACCGCGGCGGTaGGCGGTGCAAAGGGCTTCCGGGTTCCTCCGCGCT | + |
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Preference number: 6 (lower is better) Translates to: STRRSVNPSPRR*AVQRASGFLRA Trigger: AGCGCGGAGGAACCCGGAAGCCCTTTGCACCGCCCACCGCCGCGGTGACGGGTTAACGCTCCTCCTGGTGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517921.2 ENST00000523555.6 |
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| CDS TCA 72 bp | TCACCCACCCTCCCGGCGCGTCATCACCCTAAAGTTTaGGAGCGTCTGAGGCCGAGAAAATGGTCGCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: SPTLPARHHPKV*ERLRPRKWSQR Trigger: CCTTTGCGACCATTTTCTCGGCCTCAGACGCTCTCAAACTTTAGGGTGATGACGCGCCGGGAGGGTGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676662.1 ENST00000678954.1 |
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| CDS TCA 72 bp | TCCCGGCGCGTCATCACCCTAAAGTTTGAGAGCGTCTaGGGCCGAGAAAATGGTCGCAAAGGAGGAAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: SRRVITLKFESV*GRENGRKGGSS Trigger: GCTACTTCCTCCTTTGCGACCATTTTCTCGGCCTCAGACGCTCTCAAACTTTAGGGTGATGACGCGCCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000676662.1 ENST00000678954.1 |
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| CDS CAA 72 bp | TCCCTGGTCCTGATCCTGGCTGCACTACTCAATTTCTaGGGAGTGATGAAAGACAGTAGTAGAGACCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SLVLILAALLNF*GVMKDSSRDPR Trigger: CCTTGGGTCTCTACTACTGTCTTTCATCACTCCCAAGAAATTGAGTAGTGCAGCCAGGATCAGGACCAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677285.1 |
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| CDS CAA 72 bp | ATGGTGACTGGAGTGGGAGGACACATGGTCTCACAGTaGAACGCTTCCTCTTTAAGCTTCAAGATGGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: MVTGVGGHMVSQ*NASSLSFKMAR Trigger: TCTAGCCATCTTGAAGCTTAAAGAGGAAGCGTTCAACTGTGAGACCATGTGTCCTCCCACTCCAGTCACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676976.1 |
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| CDS CAA 72 bp | AGAAATGACCAAATACGAAAACCTTCATGGTTCTGGTaGCCTTCTAAAACCTACCTGTGGGATAGCTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: RNDQIRKPSWFW*PSKTYLWDSCH Trigger: ATGGCAGCTATCCCACAGGTAGGTTTTAGAAGGCAACCAGAACCATGAAGGTTTTCGTATTTGGTCATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517921.2 |
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| CDS CAA 72 bp | TATGCACATAGACTTCAACACAAGAGCAACTCAACTTaGTACCCCCTTCTTCCTGCTGAATACAGACCACTT | + |
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Preference number: 6 (lower is better) Translates to: YAHRLQHKSNST*YPLLPAEYRPL Trigger: AAGTGGTCTGTATTCAGCAGGAAGAAGGGGGTACAAAGTTGAGTTGCTCTTGTGTTGAAGTCTATGTGCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000677775.1 ENST00000678290.1 |
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| CDS CCA 72 bp | AGGGTTAAAGGGATCACTCCCATCAATACAAATGAGTaGAAGTGCATGTGTACCATGCCAATAAAAAGACCT | + |
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Preference number: 6 (lower is better) Translates to: RVKGITPINTNE*KCMCTMPIKRP Trigger: AGGTCTTTTTATTGGCATGGTACACATGCACTTCCACTCATTTGTATTGATGGGAGTGATCCCTTTAACCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677892.1 |
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| CDS GCA 72 bp | AAAGGGATCACTCCCATCAATACAAATGAGTGGAAGTaGATGTGTACCATGCCAATAAAAAGACCTCTATCA | + |
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Preference number: 6 (lower is better) Translates to: KGITPINTNEWK*MCTMPIKRPLS Trigger: TGATAGAGGTCTTTTTATTGGCATGGTACACATGCACTTCCACTCATTTGTATTGATGGGAGTGATCCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677892.1 |
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| CDS CAA 90 bp | AAGTCACAAAAGCTAAAGACAAACCCATCCCAAAATCTCAAGGTTTaGGGACAATATAGGTTACCAATTTATACTCTCAAACCTAATGCA | + |
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Preference number: 6 (lower is better) Translates to: KSQKLKTNPSQNLKV*GQYRLPIYTLKPNA Trigger: TGCATTAGGTTTGAGAGTATAAATTGGTAACCTATATTGTCCCAAAACCTTGAGATTTTGGGATGGGTTTGTCTTTAGCTTTTGTGACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000677775.1 ENST00000678290.1 |
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| CDS CAA 72 bp | AAGCTAAAGACAAACCCATCCCAAAATCTCAAGGTTTaGGGACAATATAGGTTACCAATTTATACTCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: KLKTNPSQNLKV*GQYRLPIYTLK Trigger: TTTGAGAGTATAAATTGGTAACCTATATTGTCCCAAAACCTTGAGATTTTGGGATGGGTTTGTCTTTAGCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000677775.1 ENST00000678290.1 |
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