Pregenerated sensors for PABIR2 (Homo sapiens)
Ensembl gene IDs: ENSG00000156504Ensembl transcript IDs: ENST00000298090.10, ENST00000343004.10, ENST00000370790.5, ENST00000465128.3, ENST00000478384.5, ENST00000486347.5, ENST00000493333.5, ENST00000611027.2
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCTACAGATGCTGCGGCTGCCCGGGCAGCGCTAGCACCGAGGACCTaGCAGTCGGGTAGGACCCGGCCGGGCGGCCTTGGCGGCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ATDAAAARAALAPRT*QSGRTRPGGLGGSS Trigger: GCTGGAGCCGCCAAGGCCGCCCGGCCGGGTCCTACCCGACTGTCAGGTCCTCGGTGCTAGCGCTGCCCGGGCAGCCGCAGCATCTGTAGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343004.10 ENST00000370790.5 |
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| CDS GCA 90 bp | CCTCGAGGACAGGTTGGGGGTTCGGCCTCTCAGCCGCCGCCGCGGTaGCTCCTCTTCCTCTCTCGGGTTCTAATGGTCTGGGGGAACCCG | + |
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Preference number: 5 (lower is better) Translates to: PRGQVGGSASQPPPR*LLFLSRVLMVWGNP Trigger: CGGGTTCCCCCAGACCATTAGAACCCGAGAGAGGAAGAGGAGGCACCGCGGCGGCGGCTGAGAGGCCGAACCCCCAACCTGTCCTCGAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000343004.10 ENST00000370790.5 |
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| CDS CCA 90 bp | TGCAGTCTCTTCCGCCTCCCACGCTTCAGAAGCGGGAACCTCCGCTaGGCCAGTTCTTCCGCGTCCGGGCACCCATCGGGTCCTGCGCAC | + |
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Preference number: 5 (lower is better) Translates to: CSLFRLPRFRSGNLR*ASSSASGHPSGPAH Trigger: GTGCGCAGGACCCGATGGGTGCCCGGACGCGGAAGAACTGGCCCAGCGGAGGTTCCCGCTTCTGAAGCGTGGGAGGCGGAAGAGACTGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298090.10 |
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| CDS TCA 90 bp | GAGGAAACTAGGCAGCGGCGGAACTCATGCTGCTATCTTTCCGGCTaGGGACCACAAGCGGGGCCGGGCTACAGATGCTGCGGCTGCCCG | + |
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Preference number: 5 (lower is better) Translates to: EETRQRRNSCCYLSG*GPQAGPGYRCCGCP Trigger: CGGGCAGCCGCAGCATCTGTAGCCCGGCCCCGCTTGTGGTCCTCAGCCGGAAAGATAGCAGCATGAGTTCCGCCGCTGCCTAGTTTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343004.10 ENST00000370790.5 |
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| CDS TCA 90 bp | CTTCTCCTTGATAACACCACTTGGGTGAGAGATCATCCATCAAGATaGACGAAGAGCATGAATTGGAGCATGCTACTGGAGACTCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: LLLDNTTWVRDHPSR*TKSMNWSMLLETLR Trigger: CCGCAGAGTCTCCAGTAGCATGCTCCAATTCATGCTCTTCGTTCATCTTGATGGATGATCTCTCACCCAAGTGGTGTTATCAAGGAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478384.5 |
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| CDS TCA 72 bp | GCTGCGGCTGCCCGGGCAGCGCTAGCACCGAGGACCTaGCAGTCGGGTAGGACCCGGCCGGGCGGCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: AAAARAALAPRT*QSGRTRPGGLG Trigger: GCCAAGGCCGCCCGGCCGGGTCCTACCCGACTGTCAGGTCCTCGGTGCTAGCGCTGCCCGGGCAGCCGCAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343004.10 ENST00000370790.5 |
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| CDS GCA 72 bp | GGACCACAAGCGGGGCCGGGCTACAGATGCTGCGGCTaGCCGGGCAGCGCTAGCACCGAGGACCTGACAGTC | + |
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Preference number: 6 (lower is better) Translates to: GPQAGPGYRCCG*PGSASTEDLTV Trigger: GACTGTCAGGTCCTCGGTGCTAGCGCTGCCCGGGCAGCCGCAGCATCTGTAGCCCGGCCCCGCTTGTGGTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343004.10 ENST00000370790.5 |
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| CDS CCA 72 bp | TTCCGCCTCCCACGCTTCAGAAGCGGGAACCTCCGCTaGGCCAGTTCTTCCGCGTCCGGGCACCCATCGGGT | + |
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Preference number: 6 (lower is better) Translates to: FRLPRFRSGNLR*ASSSASGHPSG Trigger: ACCCGATGGGTGCCCGGACGCGGAAGAACTGGCCCAGCGGAGGTTCCCGCTTCTGAAGCGTGGGAGGCGGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298090.10 ENST00000343004.10 |
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| CDS TCA 72 bp | AGGCAGCGGCGGAACTCATGCTGCTATCTTTCCGGCTaGGGACCACAAGCGGGGCCGGGCTACAGATGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RQRRNSCCYLSG*GPQAGPGYRCC Trigger: GCAGCATCTGTAGCCCGGCCCCGCTTGTGGTCCTCAGCCGGAAAGATAGCAGCATGAGTTCCGCCGCTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343004.10 ENST00000370790.5 |
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| CDS GCA 72 bp | GGGAACCCGTTGGGGCCAAGACCAAAATCTACAACCTaGAGTCTCTTCCGCCTCCCACGCTTCAGAAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: GNPLGPRPKSTT*SLFRLPRFRSG Trigger: CCCGCTTCTGAAGCGTGGGAGGCGGAAGAGACTGCAGGTTGTAGATTTTGGTCTTGGCCCCAACGGGTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343004.10 |
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| CDS TCA 72 bp | GATGTGTCAGGCTCAAGGTCCAGCTCCATTTTCTCCTaGGCCATGTCAGACTTGCAGGCAGGCACAGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: DVSGSRSSSIFS*AMSDLQAGTAG Trigger: GCCCGCTGTGCCTGCCTGCAAGTCTGACATGGCTCAGGAGAAAATGGAGCTGGACCTTGAGCCTGACACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000298090.10 ENST00000343004.10 ENST00000370790.5 ENST00000486347.5 ENST00000493333.5 ENST00000611027.2 |
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| CDS CAA 90 bp | GACTCTGACTTCTCCTTGAAAATCGTCTTGGACTGGGAACTGGACTaGGTGGCAATCCACTGCTGCTCACGAACATCTTTCCGAATCCCC | + |
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Preference number: 6 (lower is better) Translates to: DSDFSLKIVLDWELD*VAIHCCSRTSFRIP Trigger: GGGGATTCGGAAAGATGTTCGTGAGCAGCAGTGGATTGCCACCAAGTCCAGTTCCCAGTCCAAGACGATTTTCAAGGAGAAGTCAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298090.10 ENST00000370790.5 ENST00000478384.5 ENST00000493333.5 |
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| CDS CAA 90 bp | TCTGACTTCTCCTGCTTGAAAATCGTCTTGGACTGGGAACTGGACTaGGTGGCAATCCACTGCTGCTCACGAACATCTTTCCGAATCCCC | + |
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Preference number: 6 (lower is better) Translates to: SDFSCLKIVLDWELD*VAIHCCSRTSFRIP Trigger: GGGGATTCGGAAAGATGTTCGTGAGCAGCAGTGGATTGCCACCAAGTCCAGTTCCCAGTCCAAGACGATTTTCAAGCAGGAGAAGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343004.10 ENST00000465128.3 ENST00000486347.5 ENST00000611027.2 |
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| CDS CAA 90 bp | CACTTGGGTGAGAGATCATCCATCAAGATGAACGAAGAGCATGAATaGGAGCATGCTACTGGAGACTCTGCGGTAGCGCTGCCTTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: HLGERSSIKMNEEHE*EHATGDSAVALPLA Trigger: GGCTAAAGGCAGCGCTACCGCAGAGTCTCCAGTAGCATGCTCCAATTCATGCTCTTCGTTCATCTTGATGGATGATCTCTCACCCAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000343004.10 ENST00000370790.5 ENST00000465128.3 ENST00000478384.5 ENST00000486347.5 ENST00000493333.5 ENST00000611027.2 |
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| CDS TCA 72 bp | GCTGCTCACGAACATCTTTCCGAATCCCCTGGTGGGTaGAGGTGCTGGAGAAACTGGAGTGAAGTCAATTCT | + |
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Preference number: 6 (lower is better) Translates to: AAHEHLSESPGG*RCWRNWSEVNS Trigger: AGAATTGACTTCACTCCAGTTTCTCCAGCACCTTCACCCACCAGGGGATTCGGAAAGATGTTCGTGAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000298090.10 ENST00000343004.10 ENST00000370790.5 ENST00000465128.3 ENST00000478384.5 ENST00000486347.5 ENST00000493333.5 ENST00000611027.2 |
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| CDS CCA 72 bp | CTGGACTCTGACTTCTCCTTGAAAATCGTCTTGGACTaGGAACTGGACTTGGTGGCAATCCACTGCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LDSDFSLKIVLD*ELDLVAIHCCS Trigger: TGAGCAGCAGTGGATTGCCACCAAGTCCAGTTCCCAGTCCAAGACGATTTTCAAGGAGAAGTCAGAGTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298090.10 ENST00000370790.5 ENST00000478384.5 ENST00000493333.5 |
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| CDS CCA 72 bp | GACTCTGACTTCTCCTGCTTGAAAATCGTCTTGGACTaGGAACTGGACTTGGTGGCAATCCACTGCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: DSDFSCLKIVLD*ELDLVAIHCCS Trigger: TGAGCAGCAGTGGATTGCCACCAAGTCCAGTTCCCAGTCCAAGACGATTTTCAAGCAGGAGAAGTCAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343004.10 ENST00000465128.3 ENST00000486347.5 ENST00000611027.2 |
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| CDS CAA 72 bp | TCCTGCTTGAAAATCGTCTTGGACTGGGAACTGGACTaGGTGGCAATCCACTGCTGCTCACGAACATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SCLKIVLDWELD*VAIHCCSRTSF Trigger: GAAAGATGTTCGTGAGCAGCAGTGGATTGCCACCAAGTCCAGTTCCCAGTCCAAGACGATTTTCAAGCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000343004.10 ENST00000465128.3 ENST00000486347.5 ENST00000611027.2 |
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| CDS CAA 72 bp | GAGAGATCATCCATCAAGATGAACGAAGAGCATGAATaGGAGCATGCTACTGGAGACTCTGCGGTAGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: ERSSIKMNEEHE*EHATGDSAVAL Trigger: CAGCGCTACCGCAGAGTCTCCAGTAGCATGCTCCAATTCATGCTCTTCGTTCATCTTGATGGATGATCTCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000343004.10 ENST00000370790.5 ENST00000465128.3 ENST00000478384.5 ENST00000486347.5 ENST00000493333.5 ENST00000611027.2 |
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| CDS CAA 72 bp | TTCTCCTTGAAAATCGTCTTGGACTGGGAACTGGACTaGGTGGCAATCCACTGCTGCTCACGAACATCTTTC | + |
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Preference number: 6 (lower is better) Translates to: FSLKIVLDWELD*VAIHCCSRTSF Trigger: GAAAGATGTTCGTGAGCAGCAGTGGATTGCCACCAAGTCCAGTTCCCAGTCCAAGACGATTTTCAAGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000298090.10 ENST00000370790.5 ENST00000478384.5 ENST00000493333.5 |
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| CDS GCA 72 bp | CTCAGGCTCAAGCTCTCATCCCATGATTGGCTTATCTaGATTGCCGTTTGCATTTCCCTTTCATGTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: LRLKLSSHDWLI*IAVCISLSCAV Trigger: AACTGCACATGAAAGGGAAATGCAAACGGCAATGCAGATAAGCCAATCATGGGATGAGAGCTTGAGCCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000298090.10 ENST00000343004.10 ENST00000370790.5 ENST00000486347.5 ENST00000493333.5 ENST00000611027.2 |
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| CDS TCA 72 bp | GATAACACCACTTGGGTGAGAGATCATCCATCAAGATaGACGAAGAGCATGAATTGGAGCATGCTACTGGAG | + |
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Preference number: 6 (lower is better) Translates to: DNTTWVRDHPSR*TKSMNWSMLLE Trigger: CTCCAGTAGCATGCTCCAATTCATGCTCTTCGTTCATCTTGATGGATGATCTCTCACCCAAGTGGTGTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478384.5 |
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| CDS CAA 72 bp | AAGTCAATTCTCTTAGGAGAATATAATTTCTCCGGCTaGTCAAAATCACTGTCACTCAGGCTCAAGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: KSILLGEYNFSG*SKSLSLRLKLS Trigger: TGAGAGCTTGAGCCTGAGTGACAGTGATTTTGACAAGCCGGAGAAATTATATTCTCCTAAGAGAATTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000298090.10 ENST00000343004.10 ENST00000370790.5 ENST00000465128.3 ENST00000478384.5 ENST00000486347.5 ENST00000493333.5 ENST00000611027.2 |
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| CDS CAA 72 bp | GCAGTTAAAACGTTGAATCAGAAATGGTTAAGTCACTaGGGTGAGAGATCATCCATCAAGATGAACGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: AVKTLNQKWLSH*GERSSIKMNEE Trigger: CTCTTCGTTCATCTTGATGGATGATCTCTCACCCAAGTGACTTAACCATTTCTGATTCAACGTTTTAACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000343004.10 ENST00000370790.5 ENST00000465128.3 ENST00000486347.5 ENST00000493333.5 ENST00000611027.2 |
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| CDS TCA 72 bp | GTACCTCACACTTATAGCACATACACAGTTCATAGCTaGAACAGCTTCTTAAAAGCAGAATGCACAATCACA | + |
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Preference number: 6 (lower is better) Translates to: VPHTYSTYTVHS*NSFLKAECTIT Trigger: TGTGATTGTGCATTCTGCTTTTAAGAAGCTGTTTCAGCTATGAACTGTGTATGTGCTATAAGTGTGAGGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298090.10 ENST00000343004.10 ENST00000370790.5 |
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| CDS CCA 72 bp | ATAACTATTCATTCATTTGTAGATGCTCCACACATCTaGTCAAGGCAGGAATTTCTTCTCCTTGATAACACC | + |
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Preference number: 6 (lower is better) Translates to: ITIHSFVDAPHI*SRQEFLLLDNT Trigger: GGTGTTATCAAGGAGAAGAAATTCCTGCCTTGACCAGATGTGTGGAGCATCTACAAATGAATGAATAGTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000298090.10 ENST00000343004.10 ENST00000370790.5 ENST00000478384.5 |
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| CDS CAA 90 bp | AGATCAGCAAAACCAGATACTAGTAAGGTCACTAGGCTCACAAAATaGAACTTTGGAGAAGAGAGATGCCAAAGAGTAATAATAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: RSAKPDTSKVTRLTK*NFGEERCQRVIIAS Trigger: TGATGCTATTATTACTCTTTGGCATCTCTCTTCTCCAAAGTTCAATTTTGTGAGCCTAGTGACCTTACTAGTATCTGGTTTTGCTGATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000343004.10 ENST00000370790.5 ENST00000465128.3 ENST00000486347.5 |
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