RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OTULIN (Homo sapiens)

Ensembl gene IDs: ENSG00000154124

Ensembl transcript IDs: ENST00000284274.5, ENST00000503023.1, ENST00000506417.1, ENST00000507335.1, ENST00000508678.1, ENST00000514913.1

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCCCCACAGCCTGGCTCATGGCCTGGAACAGCGTGGCCCTCAGTaGACAGTAATTATCACCACGGACTCGCCGTATGGAGGTGAACTT +
Preference number: 1 (lower is better)
Translates to: QPHSLAHGLEQRGPQ*TVIITTDSPYGGEL
Trigger: AAGTTCACCTCCATACGGCGAGTCCGTGGTGATAATTACTGTGCACTGAGGGCCACGCTGTTCCAGGCCATGAGCCAGGCTGTGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR CCA 90 bp GTCTCGCACACACCAAACCTCTTTGCGGCAAACACACAGCAGGGCTaGGTCAGAATTGGGGCTGCAGCCCTGCTTTGCAGGTCTGGAGGA +
Preference number: 1 (lower is better)
Translates to: VSHTPNLFAANTQQG*VRIGAAALLCRSGG
Trigger: TCCTCCAGACCTGCAAAGCAGGGCTGCAGCCCCAATTCTGACCCAGCCCTGCTGTGTGTTTGCCGCAAAGAGGTTTGGTGTGTGCGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 90 bp GTCTTTCTGCTGCACATGACCGACTTAGCACTGCCGTCTAATGGATaGCCAGTACCTACCCACTGGGTTCTTCAGAAGCCCAGCTCCATC +
Preference number: 1 (lower is better)
Translates to: VFLLHMTDLALPSNG*PVPTHWVLQKPSSI
Trigger: GATGGAGCTGGGCTTCTGAAGAACCCAGTGGGTAGGTACTGGGCATCCATTAGACGGCAGTGCTAAGTCGGTCATGTGCAGCAGAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 90 bp ACCGACTTAGCACTGCCGTCTAATGGATGCCCAGTACCTACCCACTaGGTTCTTCAGAAGCCCAGCTCCATCTTGCAAGACTCCCAGACT +
Preference number: 1 (lower is better)
Translates to: TDLALPSNGCPVPTH*VLQKPSSILQDSQT
Trigger: AGTCTGGGAGTCTTGCAAGATGGAGCTGGGCTTCTGAAGAACCCAGTGGGTAGGTACTGGGCATCCATTAGACGGCAGTGCTAAGTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 90 bp GGCCAGGGGTCAAGAGTCAGCCATGTGGACATCATAGGTCTGCCTTaGGGGTGCCAGAAAGTTAGAGCCCAATGTAATAGCACAATCTGC +
Preference number: 1 (lower is better)
Translates to: GQGSRVSHVDIIGLP*GCQKVRAQCNSTIC
Trigger: GCAGATTGTGCTATTACATTGGGCTCTAACTTTCTGGCACCCGCAAGGCAGACCTATGATGTCCACATGGCTGACTCTTGACCCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR TCA 90 bp GGAACTGTCCAAGCCCACCCTTTTAGTGGGCAGCGGGAATGCTGTTaGATCCAGACCCAAGCTGAAAACTATGCACCTAATTTGGCTGGC +
Preference number: 1 (lower is better)
Translates to: GTVQAHPFSGQRECC*IQTQAENYAPNLAG
Trigger: GCCAGCCAAATTAGGTGCATAGTTTTCAGCTTGGGTCTGGATTCAACAGCATTCCCGCTGCCCACTAAAAGGGTGGGCTTGGACAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR TCA 90 bp TCATCTAACTCTTCCACACTGCCCAATACTGCCTCCCTAAACCCTTaGTTCCTCTGCTCACAATGGCCAGGGGTCAAGAGTCAGCCATGT +
Preference number: 1 (lower is better)
Translates to: SSNSSTLPNTASLNP*FLCSQWPGVKSQPC
Trigger: ACATGGCTGACTCTTGACCCCTGGCCATTGTGAGCAGAGGAATCAAGGGTTTAGGGAGGCAGTATTGGGCAGTGTGGAAGAGTTAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 90 bp GGGTCAAGAGTCAGCCATGTGGACATCATAGGTCTGCCTTGCGGGTaGCAGAAAGTTAGAGCCCAATGTAATAGCACAATCTGCCAAAGT +
Preference number: 1 (lower is better)
Translates to: GSRVSHVDIIGLPCG*QKVRAQCNSTICQS
Trigger: ACTTTGGCAGATTGTGCTATTACATTGGGCTCTAACTTTCTGGCACCCGCAAGGCAGACCTATGATGTCCACATGGCTGACTCTTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 90 bp TGTAAATGGTTCATAAAGAAATGTCTCGCACACACCAAACCTCTTTaGGGCAAACACACAGCAGGGCTGGGTCAGAATTGGGGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: CKWFIKKCLAHTKPL*GKHTAGLGQNWGCS
Trigger: GCTGCAGCCCCAATTCTGACCCAGCCCTGCTGTGTGTTTGCCGCAAAGAGGTTTGGTGTGTGCGAGACATTTCTTTATGAACCATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR TCA 90 bp CCCTCAGTGCACAGTAATTATCACCACGGACTCGCCGTATGGAGGTaGACTTCTGAGAAACCTCTTCATAGCCCATTTTCATACACGTTG +
Preference number: 1 (lower is better)
Translates to: PSVHSNYHHGLAVWR*TSEKPLHSPFSYTL
Trigger: CAACGTGTATGAAAATGGGCTATGAAGAGGTTTCTCAGAAGTTCACCTCCATACGGCGAGTCCGTGGTGATAATTACTGTGCACTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR GCA 90 bp AGGTTCCCTCACCACTCCCTCCTACGCTCCTCCAGTCTTCAAAAATaGCTTGAAATAACCCACTTTGGGACCCAATTCTTAATCTGTTGC +
Preference number: 1 (lower is better)
Translates to: RFPHHSLLRSSSLQK*LEITHFGTQFLICC
Trigger: GCAACAGATTAAGAATTGGGTCCCAAAGTGGGTTATTTCAAGGCATTTTTGAAGACTGGAGGAGCGTAGGAGGGAGTGGTGAGGGAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 90 bp TTAAGCTCAAGTACTTCTGCTTACTGGGAGAACTGCCAAGTCCACTaGCAAGACTGTGGACATTTTAAGCCCTGTGTCCCTTCCTTGTAC +
Preference number: 1 (lower is better)
Translates to: LSSSTSAYWENCQVH*QDCGHFKPCVPSLY
Trigger: GTACAAGGAAGGGACACAGGGCTTAAAATGTCCACAGTCTTGGCAGTGGACTTGGCAGTTCTCCCAGTAAGCAGAAGTACTTGAGCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 90 bp TTTCCTCACACATTCACTAAACCACTGTTCTGTTCAACGTGGCACTaGCTCCCTAGTCTTCCCATCCCCTTAGATGATGTCACAAATGAG +
Preference number: 1 (lower is better)
Translates to: FPHTFTKPLFCSTWH*LPSLPIPLDDVTNE
Trigger: CTCATTTGTGACATCATCTAAGGGGATGGGAAGACTAGGGAGCCAGTGCCACGTTGAACAGAACAGTGGTTTAGTGAATGTGTGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 90 bp AAAAAGTGTATCAATCCAAATGAATGGGCCACTGGAGGAGGAAAGTaGTTTGTTGTTCACAGTGGGGAGGTCTTTCTGCTGCACATGACC +
Preference number: 1 (lower is better)
Translates to: KKCINPNEWATGGGK*FVVHSGEVFLLHMT
Trigger: GGTCATGTGCAGCAGAAAGACCTCCCCACTGTGAACAACAAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 90 bp AATTTCTCTTATCAAAAGCTAGTCTTCAGGACATCCTGTCCAACTTaGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTCTTAGA +
Preference number: 1 (lower is better)
Translates to: NFSYQKLVFRTSCPT*LPGAQGFFSEIVLR
Trigger: TCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTTTTGATAAGAGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
3UTR TCA 90 bp GGGAGAAAGTGCATTTCTGACACTGAAAAAGTGTATCAATCCAAATaGATGGGCCACTGGAGGAGGAAAGTGGTTTGTTGTTCACAGTGG +
Preference number: 1 (lower is better)
Translates to: GRKCISDTEKVYQSK*MGHWRRKVVCCSQW
Trigger: CCACTGTGAACAACAAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACTTTTTCAGTGTCAGAAATGCACTTTCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 90 bp TTAGTTATTTGTTTTTACAGTCCTCTGCAGCAGGGTTTGCTAAAGTaGATCAACAGCAAAGCCCCCAAGTCAGTTCAGCTTCTGACAGTG +
Preference number: 1 (lower is better)
Translates to: LVICFYSPLQQGLLK*INSKAPKSVQLLTV
Trigger: CACTGTCAGAAGCTGAACTGACTTGGGGGCTTTGCTGTTGATCCACTTTAGCAAACCCTGCTGCAGAGGACTGTAAAAACAAATAACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 90 bp GAAAGTGCATTTCTGACACTGAAAAAGTGTATCAATCCAAATGAATaGGCCACTGGAGGAGGAAAGTGGTTTGTTGTTCACAGTGGGGAG +
Preference number: 1 (lower is better)
Translates to: ESAFLTLKKCINPNE*ATGGGKWFVVHSGE
Trigger: CTCCCCACTGTGAACAACAAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACTTTTTCAGTGTCAGAAATGCACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 90 bp ACCAGGTCCTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTaGTTGATCCAGTTGTATTTGCTTATGAGTTTTTCTGGTAACAGC +
Preference number: 1 (lower is better)
Translates to: TRSSFFPSNFSPSFH*LIQLYLLMSFSGNS
Trigger: GCTGTTACCAGAAAAACTCATAAGCAAATACAACTGGATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAGGACCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR GCA 90 bp CCTACTACATTCCTTTCTTCTAGAACACCTTATCATTTTGAAGACTaGTCTAAGTGGAACATCCTCCTGAATCCACTTAATCTCCATTCA +
Preference number: 1 (lower is better)
Translates to: PTTFLSSRTPYHFED*SKWNILLNPLNLHS
Trigger: TGAATGGAGATTAAGTGGATTCAGGAGGATGTTCCACTTAGAGCAGTCTTCAAAATGATAAGGTGTTCTAGAAGAAAGGAATGTAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 90 bp TTCCTTTCTTCTAGAACACCTTATCATTTTGAAGACTGCTCTAAGTaGAACATCCTCCTGAATCCACTTAATCTCCATTCAACTTCTAAT +
Preference number: 1 (lower is better)
Translates to: FLSSRTPYHFEDCSK*NILLNPLNLHSTSN
Trigger: ATTAGAAGTTGAATGGAGATTAAGTGGATTCAGGAGGATGTTCCACTTAGAGCAGTCTTCAAAATGATAAGGTGTTCTAGAAGAAAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR GCA 90 bp CTGACCGCATCTGCAGGTGGGAACCAAGGCCCCAAACTGCACAGAGCCTCGGGGCCCAGGAGCCACCTGTaGATCTTCGCCACGTCGCCA +
Preference number: 2 (lower is better)
Translates to: LTASAGGNQGPKLHRASGPRSHL*IFATSP
Trigger: TGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGG...CCCCGAGGCTCTGTGCAGTTTGGGGCCTTGGTTCCCACCTGCAGATGCGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CAA 90 bp CCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATaGTTCTTAGAGACCCCCAAACCTGCAGCCCAAGCCCAGGAGCCA +
Preference number: 2 (lower is better)
Translates to: PVQLGSQGPKGSSQR*FLETPKPAAQAQEP
Trigger: TGGCTCCTGGGCTTGGGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
3UTR-3UTR TCA 90 bp CTCCCTAAACCCTTGATTCCTCTGCTCACAATGGCCAGGGGTCAAGAGTCAGCCCTGTCACTCATCCCCTaGCCCAGACGGGTTACACAG +
Preference number: 2 (lower is better)
Translates to: LPKPLIPLLTMARGQESALSLIP*PRRVTQ
Trigger: CTGTGTAACCCGTCTGGGTCAGGGGATGAGTGACAG...GGCTGACTCTTGACCCCTGGCCATTGTGAGCAGAGGAATCAAGGGTTTAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR CCA 90 bp CCTCCTGGTCATGGGCAAGCCCACCTCACACCTACTGCTAGTGACTTACAGGAACGGGTTACACAGATCTaGCAGTGGACACACCCTCCA +
Preference number: 2 (lower is better)
Translates to: PPGHGQAHLTPTASDLQERVTQI*QWTHPP
Trigger: TGGAGGGTGTGTCCACTGCCAGATCTGTGTAACCCG...TTCCTGTAAGTCACTAGCAGTAGGTGTGAGGTGGGCTTGCCCATGACCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR TCA 90 bp CACAGCCTGGCTCATGGCCTGGAACAGCGTGGCCCTCAGTGCACAGTAATTATCCTCGCCGTATGGAGGTaGACTTCTGAGAAACCTCTT +
Preference number: 2 (lower is better)
Translates to: HSLAHGLEQRGPQCTVIILAVWR*TSEKPL
Trigger: AAGAGGTTTCTCAGAAGTTCACCTCCATACGGCGAG...GATAATTACTGTGCACTGAGGGCCACGCTGTTCCAGGCCATGAGCCAGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR-3UTR CCA 90 bp CTCCCTAAACCCTTGATTCCTCTGCTCACAATGGCCAGGGGTCAAGAGTCAGCCGTAATCTCAGCACTTTaGGAGGCCAAAGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: LPKPLIPLLTMARGQESAVISAL*EAKAGG
Trigger: TCCACCTGCTTTGGCCTCCCAAAGTGCTGAGATTAC...GGCTGACTCTTGACCCCTGGCCATTGTGAGCAGAGGAATCAAGGGTTTAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR GCA 90 bp TACCACTTAAAGCAGACTGTTAGAAGCCCCCTCAGTGCAGTGGGCAGCACGTCAGGAGAAGATATGGTTTaGACCGTCCAACAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: YHLKQTVRSPLSAVGSTSGEDMV*TVQQVC
Trigger: GCACACCTGTTGGACGGTGCAAACCATATCTTCTCC...TGACGTGCTGCCCACTGCACTGAGGGGGCTTCTAACAGTCTGCTTTAAGTGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR TCA 90 bp AGTGTATCAATCCAAATGAATGGGCCACTGGAGGAGGAAAGTGGTTTGTTGTTCTCACCACCCTTAGCCTaGTTGGGCAGGCGATGGCTC +
Preference number: 2 (lower is better)
Translates to: SVSIQMNGPLEEESGLLFSPPLA*LGRRWL
Trigger: GAGCCATCGCCTGCCCAATCAGGCTAAGGGTGGTGA...GAACAACAAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR GCA 90 bp CTCCCTAAACCCTTGATTCCTCTGCTCACAATGGCCAGGGGTCAAGAGTCAGCCTTCCCCAATGGTTTATaGTTCTGGCTTTCAAAGGGG +
Preference number: 2 (lower is better)
Translates to: LPKPLIPLLTMARGQESAFPNGL*FWLSKG
Trigger: CCCCTTTGAAAGCCAGAAGCATAAACCATTGGGGAA...GGCTGACTCTTGACCCCTGGCCATTGTGAGCAGAGGAATCAAGGGTTTAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR GCA 90 bp GTTAAGCACTGTGCTAACTGCTTCATCTCATCTAACTCTTCCACACTGCCCAATGCAACTGACCGCATCTaGAGGTGGGAACCAAGGCCC +
Preference number: 2 (lower is better)
Translates to: VKHCANCFISSNSSTLPNATDRI*RWEPRP
Trigger: GGGCCTTGGTTCCCACCTGCAGATGCGGTCAGTTGC...ATTGGGCAGTGTGGAAGAGTTAGATGAGATGAAGCAGTTAGCACAGTGCTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR CCA 90 bp TCATCCCCTGACCCAGACGGGTTACACAGATCTGGCAGTGGACACACCCTCCAATACCTCAAAGTAATTTaGCCTTTGGTTCCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: SSPDPDGLHRSGSGHTLQYLKVI*PLVPPL
Trigger: CAGAGGAGGAACCAAAGGCCAAATTACTTTGAGGTA...TTGGAGGGTGTGTCCACTGCCAGATCTGTGTAACCCGTCTGGGTCAGGGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR GCA 90 bp GCTGCCAGGTTCACACAGTGTGCTGCTCCACCAGCCTCCATTCACAATGGCTTAATTACTGTGGATTGCTaGAGTTCTTATAAGGGGTAC +
Preference number: 2 (lower is better)
Translates to: AARFTQCAAPPASIHNGLITVDC*SSYKGY
Trigger: GTACCCCTTATAAGAACTGCAGCAATCCACAGTAAT...TAAGCCATTGTGAATGGAGGCTGGTGGAGCAGCACACTGTGTGAACCTGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR CCA 90 bp TCATCCCCTGACCCAGACGGGTTACACAGATCTGGCAGTGGACACACCCTCCAAAAAGTATTTGCCTTCTaGAGAAGATATGGTTTGCAC +
Preference number: 2 (lower is better)
Translates to: SSPDPDGLHRSGSGHTLQKVFAF*RRYGLH
Trigger: GTGCAAACCATATCTTCTCCAGAAGGCAAATACTTT...TTGGAGGGTGTGTCCACTGCCAGATCTGTGTAACCCGTCTGGGTCAGGGGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR GCA 90 bp CTCCATCTTGCAAGACTCCCAGACTCTAGTTCTTTGACAAACAGGAAGGCAGAGAAGCTCAAGTACTTCTaGTTACTGGGAGAACTGCCA +
Preference number: 2 (lower is better)
Translates to: LHLARLPDSSSLTNRKAEKLKYF*LLGELP
Trigger: TGGCAGTTCTCCCAGTAAGCAGAAGTACTTGAGCTT...CTCTGCCTTCCTGTTTGTCAAAGAACTAGAGTCTGGGAGTCTTGCAAGATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR GCA 90 bp GTCCTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTGCTTGATCCAGTTCAGCGTGGCCCTCAGTaGACAGTAATTATCACCACG +
Preference number: 2 (lower is better)
Translates to: VLILPIKFQSKFPLLDPVQRGPQ*TVIITT
Trigger: CGTGGTGATAATTACTGTGCACTGAGGGCCACGCTG...AACTGGATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR-3UTR CCA 90 bp GTTAAGCACTGTGCTAACTGCTTCATCTCATCTAACTCTTCCACACTGCCCAATCTTCTGGAGAAGATATaGTTTGCACCGTCCAACAGG +
Preference number: 2 (lower is better)
Translates to: VKHCANCFISSNSSTLPNLLEKI*FAPSNR
Trigger: CCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAG...ATTGGGCAGTGTGGAAGAGTTAGATGAGATGAAGCAGTTAGCACAGTGCTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR TCA 90 bp GTTAAGCACTGTGCTAACTGCTTCATCTCATCTAACTCTTCCACACTGCCCAATCAGATTCAATGTACCTaGAGGGCACAGATCTCTACT +
Preference number: 2 (lower is better)
Translates to: VKHCANCFISSNSSTLPNQIQCT*RAQIST
Trigger: AGTAGAGATCTGTGCCCTTCAGGTACATTGAATCTG...ATTGGGCAGTGTGGAAGAGTTAGATGAGATGAAGCAGTTAGCACAGTGCTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR TCA 90 bp CTGAAAAAGTGTATCAATCCAAATGAATGGGCCACTGGAGGAGGAAAGTGGTTTCAGACTCTAGTTCTTTaGCAAACAGGAAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: LKKCINPNEWATGGGKWFQTLVL*QTGRQS
Trigger: GCTCTGCCTTCCTGTTTGTCAAAGAACTAGAGTCTG...AAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACTTTTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR GCA 90 bp TCACAAGCTATCTGTCTTGCTTCAGCAGTTCTCATTTCAGCCAAGCCTGCCCACAGTCCAAGTTTCCATTaGTTGATCCAGTTGTATTTG +
Preference number: 2 (lower is better)
Translates to: SQAICLASAVLISAKPAHSPSFH*LIQLYL
Trigger: CAAATACAACTGGATCAAGCAATGGAAACTTGGACT...GTGGGCAGGCTTGGCTGAAATGAGAACTGCTGAAGCAAGACAGATAGCTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
3UTR-3UTR TCA 90 bp ATATTCCTCTCCAAAACTGAGTTTCCTCTGATACAAAAGTATTTGCCTTCTGGACCAACAGGTGTGCTCTaGAGGCCCCCACTGAAATAT +
Preference number: 2 (lower is better)
Translates to: IFLSKTEFPLIQKYLPSGPTGVL*RPPLKY
Trigger: ATATTTCAGTGGGGGCCTTCAGAGCACACCTGTTGG...TCCAGAAGGCAAATACTTTTGTATCAGAGGAAACTCAGTTTTGGAGAGGAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
3UTR-3UTR GCA 90 bp AGTGTATCAATCCAAATGAATGGGCCACTGGAGGAGGAAAGTGGTTTGTTGTTCTCAAAGGGGAGTACCTaGAAAGTACTGCTTAAGAAA +
Preference number: 2 (lower is better)
Translates to: SVSIQMNGPLEEESGLLFSKGST*KVLLKK
Trigger: TTTCTTAAGCAGTACTTTGCAGGTACTCCCCTTTGA...GAACAACAAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CAA 90 bp TTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTGCTTGATCCAGTaGTATTTGCTTATGAGTTTTTCTGGTAACAGCATGAGCTCCGGG +
Preference number: 2 (lower is better)
Translates to: FFPSNFSPSFHCLIQ*YLLMSFSGNSMSSG
Trigger: CCCGGAGCTCATGCTGTTACCAGAAAAACTCATAAGCAAATACAACTGGATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR CAA 90 bp AGGTCCTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTGCTaGATCCAGTTGTATTTGCTTATGAGTTTTTCTGGTAACAGCATG +
Preference number: 2 (lower is better)
Translates to: RSSFFPSNFSPSFHC*IQLYLLMSFSGNSM
Trigger: CATGCTGTTACCAGAAAAACTCATAAGCAAATACAACTGGATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAGGACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR CCA 72 bp GGCCCCAGGAGCCAGGCAACTGACCGCATCTGCAGGTaGGAACCAAGGCCCCAAACTGCACAGAGCCTCGGG +
Preference number: 3 (lower is better)
Translates to: GPRSQATDRICR*EPRPQTAQSLG
Trigger: CCCGAGGCTCTGTGCAGTTTGGGGCCTTGGTTCCCACCTGCAGATGCGGTCAGTTGCCTGGCTCCTGGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 72 bp AACTCTGGCCCCAGGAGCCAGGCAACTGACCGCATCTaGAGGTGGGAACCAAGGCCCCAAACTGCACAGAGC +
Preference number: 3 (lower is better)
Translates to: NSGPRSQATDRI*RWEPRPQTAQS
Trigger: GCTCTGTGCAGTTTGGGGCCTTGGTTCCCACCTGCAGATGCGGTCAGTTGCCTGGCTCCTGGGGCCAGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 72 bp AGCCTGGCTCATGGCCTGGAACAGCGTGGCCCTCAGTaGACAGTAATTATCACCACGGACTCGCCGTATGGA +
Preference number: 3 (lower is better)
Translates to: SLAHGLEQRGPQ*TVIITTDSPYG
Trigger: TCCATACGGCGAGTCCGTGGTGATAATTACTGTGCACTGAGGGCCACGCTGTTCCAGGCCATGAGCCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR GCA 72 bp CTGCACATGACCGACTTAGCACTGCCGTCTAATGGATaGCCAGTACCTACCCACTGGGTTCTTCAGAAGCCC +
Preference number: 3 (lower is better)
Translates to: LHMTDLALPSNG*PVPTHWVLQKP
Trigger: GGGCTTCTGAAGAACCCAGTGGGTAGGTACTGGGCATCCATTAGACGGCAGTGCTAAGTCGGTCATGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 72 bp GCACTGCCGTCTAATGGATGCCCAGTACCTACCCACTaGGTTCTTCAGAAGCCCAGCTCCATCTTGCAAGAC +
Preference number: 3 (lower is better)
Translates to: ALPSNGCPVPTH*VLQKPSSILQD
Trigger: GTCTTGCAAGATGGAGCTGGGCTTCTGAAGAACCCAGTGGGTAGGTACTGGGCATCCATTAGACGGCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 72 bp GGCCACTGGAGGAGGAAAGTGGTTTGTTGTTCACAGTaGGGAGGTCTTTCTGCTGCACATGACCGACTTAGC +
Preference number: 3 (lower is better)
Translates to: GHWRRKVVCCSQ*GGLSAAHDRLS
Trigger: GCTAAGTCGGTCATGTGCAGCAGAAAGACCTCCCCACTGTGAACAACAAACCACTTTCCTCCTCCAGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR TCA 72 bp TCTTCCACACTGCCCAATACTGCCTCCCTAAACCCTTaGTTCCTCTGCTCACAATGGCCAGGGGTCAAGAGT +
Preference number: 3 (lower is better)
Translates to: SSTLPNTASLNP*FLCSQWPGVKS
Trigger: ACTCTTGACCCCTGGCCATTGTGAGCAGAGGAATCAAGGGTTTAGGGAGGCAGTATTGGGCAGTGTGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR CAA 90 bp CCTCCTGGTCATGGGCAAGCCCACCTCACACCTACTGCTAGTGACTTACAGGAAGGTTCTTCTCAGAGATaGTTCTTAGAGACCCCCAAA +
Preference number: 3 (lower is better)
Translates to: PPGHGQAHLTPTASDLQEGSSQR*FLETPK
Trigger: TTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACC...TTCCTGTAAGTCACTAGCAGTAGGTGTGAGGTGGGCTTGCCCATGACCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 72 bp GTCAGCCATGTGGACATCATAGGTCTGCCTTGCGGGTaGCAGAAAGTTAGAGCCCAATGTAATAGCACAATC +
Preference number: 3 (lower is better)
Translates to: VSHVDIIGLPCG*QKVRAQCNSTI
Trigger: GATTGTGCTATTACATTGGGCTCTAACTTTCTGGCACCCGCAAGGCAGACCTATGATGTCCACATGGCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 72 bp TATCAAAAGCTAGTCTTCAGGACATCCTGTCCAACTTaGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATT +
Preference number: 3 (lower is better)
Translates to: YQKLVFRTSCPT*LPGAQGFFSEI
Trigger: AATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTTTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
3UTR CCA 72 bp AACCCAGGTCCAGCTAAGCCCTACCTCAAAGTAATTTaGCCTTTGGTTCCTCCTCTGAAAGCAGGTGGATAC +
Preference number: 3 (lower is better)
Translates to: NPGPAKPYLKVI*PLVPPLKAGGY
Trigger: GTATCCACCTGCTTTCAGAGGAGGAACCAAAGGCCAAATTACTTTGAGGTAGGGCTTAGCTGGACCTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 72 bp ATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTaGACCGTCCAACAGGTGTGCTCTGAAGGCCCCCAC +
Preference number: 3 (lower is better)
Translates to: IQKYLPSGEDMV*TVQQVCSEGPH
Trigger: GTGGGGGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
3UTR GCA 72 bp AGTCCCAAGCTGCGAGGACACATGCACATAAAGGTATaGTGTGACTGCAGACCAACACGCATATACACACAT +
Preference number: 3 (lower is better)
Translates to: SPKLRGHMHIKV*CDCRPTRIYTH
Trigger: ATGTGTGTATATGCGTGTTGGTCTGCAGTCACAGCATACCTTTATGTGCATGTGTCCTCGCAGCTTGGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 72 bp TTCATAAAGAAATGTCTCGCACACACCAAACCTCTTTaGGGCAAACACACAGCAGGGCTGGGTCAGAATTGG +
Preference number: 3 (lower is better)
Translates to: FIKKCLAHTKPL*GKHTAGLGQNW
Trigger: CCAATTCTGACCCAGCCCTGCTGTGTGTTTGCCGCAAAGAGGTTTGGTGTGTGCGAGACATTTCTTTATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 72 bp ACATTCACTAAACCACTGTTCTGTTCAACGTGGCACTaGCTCCCTAGTCTTCCCATCCCCTTAGATGATGTC +
Preference number: 3 (lower is better)
Translates to: TFTKPLFCSTWH*LPSLPIPLDDV
Trigger: GACATCATCTAAGGGGATGGGAAGACTAGGGAGCCAGTGCCACGTTGAACAGAACAGTGGTTTAGTGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR CAA 90 bp ATGCTGAGATGGCAGAAGTGCTGTATCATTAAAGGTGATTCAGCACTTCACAGCTGCAGTCCACACCCCTaGAGGACAATTCAGGCCATA +
Preference number: 3 (lower is better)
Translates to: MLRWQKCCIIKGDSALHSCSPHP*RTIQAI
Trigger: TATGGCCTGAATTGTCCTCAAGGGGTGTGGACTGCA...GCTGTGAAGTGCTGAATCACCTTTAATGATACAGCACTTCTGCCATCTCAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR CAA 90 bp GTTAAGCACTGTGCTAACTGCTTCATCTCATCTAACTCTTCCACACTGCCCAATCCTCTGCAGCAGGGTTaGCTAAAGTGGATCAACAGC +
Preference number: 3 (lower is better)
Translates to: VKHCANCFISSNSSTLPNPLQQG*LKWINS
Trigger: GCTGTTGATCCACTTTAGCAAACCCTGCTGCAGAGG...ATTGGGCAGTGTGGAAGAGTTAGATGAGATGAAGCAGTTAGCACAGTGCTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 72 bp CACCACTCCCTCCTACGCTCCTCCAGTCTTCAAAAATaGCTTGAAATAACCCACTTTGGGACCCAATTCTTA +
Preference number: 3 (lower is better)
Translates to: HHSLLRSSSLQK*LEITHFGTQFL
Trigger: TAAGAATTGGGTCCCAAAGTGGGTTATTTCAAGGCATTTTTGAAGACTGGAGGAGCGTAGGAGGGAGTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 72 bp TGTTTTTACAGTCCTCTGCAGCAGGGTTTGCTAAAGTaGATCAACAGCAAAGCCCCCAAGTCAGTTCAGCTT +
Preference number: 3 (lower is better)
Translates to: CFYSPLQQGLLK*INSKAPKSVQL
Trigger: AAGCTGAACTGACTTGGGGGCTTTGCTGTTGATCCACTTTAGCAAACCCTGCTGCAGAGGACTGTAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR CAA 90 bp AGTGTATCAATCCAAATGAATGGGCCACTGGAGGAGGAAAGTGGTTTGTTGTTCGCAGAGGGTCTAAAGTaGGCTTGTTATCCTCTCCAA +
Preference number: 3 (lower is better)
Translates to: SVSIQMNGPLEEESGLLFAEGLK*ACYPLQ
Trigger: TTGGAGAGGATAACAAGCCAACTTTAGACCCTCTGC...GAACAACAAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR CAA 90 bp GTTAAGCACTGTGCTAACTGCTTCATCTCATCTAACTCTTCCACACTGCCCAATAGAGCAGGCGAAATTTaGGACACATGCGGAACATCT +
Preference number: 3 (lower is better)
Translates to: VKHCANCFISSNSSTLPNRAGEI*DTCGTS
Trigger: AGATGTTCCGCATGTGTCCAAAATTTCGCCTGCTCT...ATTGGGCAGTGTGGAAGAGTTAGATGAGATGAAGCAGTTAGCACAGTGCTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR TCA 72 bp CACAGTAATTATCACCACGGACTCGCCGTATGGAGGTaGACTTCTGAGAAACCTCTTCATAGCCCATTTTCA +
Preference number: 3 (lower is better)
Translates to: HSNYHHGLAVWR*TSEKPLHSPFS
Trigger: TGAAAATGGGCTATGAAGAGGTTTCTCAGAAGTTCACCTCCATACGGCGAGTCCGTGGTGATAATTACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR-3UTR CAA 90 bp AGAAGCTGTCCTGGGTCATTTGATGTGTCCCGAGCAAACAGAAGCACAGAGAAACAGTCCAAGTTTCCATaGCTTGATCCAGTTGTATTT +
Preference number: 3 (lower is better)
Translates to: RSCPGSFDVSRANRSTEKQSKFP*LDPVVF
Trigger: AAATACAACTGGATCAAGCAATGGAAACTTGGACTG...TTTCTCTGTGCTTCTGTTTGCTCGGGACACATCAAATGACCCAGGACAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR TCA 72 bp ATAAGTGCTAGCACCTCACTTAATCCACACCACCACTaGGACAGACTGTGTGTGGTAAAGATGAAGAAACAG +
Preference number: 3 (lower is better)
Translates to: ISASTSLNPHHH*DRLCVVKMKKQ
Trigger: CTGTTTCTTCATCTTTACCACACACAGTCTGTCTCAGTGGTGGTGTGGATTAAGTGAGGTGCTAGCACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR CAA 90 bp AATGCCAGAAGTGGCAGGCTGTCAAACCAGTTTAGTTTTGTTGCTTTTCATTGGCTACCTCAAAGTAATTaGGCCTTTGGTTCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: NARSGRLSNQFSFVAFHWLPQSN*AFGSSS
Trigger: AGAGGAGGAACCAAAGGCCAAATTACTTTGAGGTAG...CCAATGAAAAGCAACAAAACTAAACTGGTTTGACAGCCTGCCACTTCTGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR TCA 72 bp CAGCTTCATAGAGGCTATATTCCTCCGCCTCATTTGTaGATAGTTCATCACAAGCTATCTGTCTTGCTTCAG +
Preference number: 3 (lower is better)
Translates to: QLHRGYIPPPHL*IVHHKLSVLLQ
Trigger: CTGAAGCAAGACAGATAGCTTGTGATGAACTATTCACAAATGAGGCGGAGGAATATAGCCTCTATGAAGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
3UTR GCA 72 bp CTGCATGTCTACAAGTTAAGATTCCCCAATGGTTTATaGTTCTGGCTTTCAAAGGGGAGTACCTGCAAAGTA +
Preference number: 3 (lower is better)
Translates to: LHVYKLRFPNGL*FWLSKGSTCKV
Trigger: TACTTTGCAGGTACTCCCCTTTGAAAGCCAGAAGCATAAACCATTGGGGAATCTTAACTTGTAGACATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 72 bp GTCTACAAGTTAAGATTCCCCAATGGTTTATGCTTCTaGCTTTCAAAGGGGAGTACCTGCAAAGTACTGCTT +
Preference number: 3 (lower is better)
Translates to: VYKLRFPNGLCF*LSKGSTCKVLL
Trigger: AAGCAGTACTTTGCAGGTACTCCCCTTTGAAAGCCAGAAGCATAAACCATTGGGGAATCTTAACTTGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR CAA 90 bp AGTTCATCACAAGCTATCTGTCTTGCTTCAGCAGTTCTCATTTCAGCCAAGCCTCAGTCCAAGTTTCCATaGCTTGATCCAGTTGTATTT +
Preference number: 3 (lower is better)
Translates to: SSSQAICLASAVLISAKPQSKFP*LDPVVF
Trigger: AAATACAACTGGATCAAGCAATGGAAACTTGGACTG...AGGCTTGGCTGAAATGAGAACTGCTGAAGCAAGACAGATAGCTTGTGATGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
3UTR TCA 72 bp TGCATTTCTGACACTGAAAAAGTGTATCAATCCAAATaGATGGGCCACTGGAGGAGGAAAGTGGTTTGTTGT +
Preference number: 3 (lower is better)
Translates to: CISDTEKVYQSK*MGHWRRKVVCC
Trigger: ACAACAAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACTTTTTCAGTGTCAGAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 72 bp ATTACTTTGAAGTTCAGAATTAAGCTCAAGTACTTCTaGTTACTGGGAGAACTGCCAAGTCCACTGCCAAGA +
Preference number: 3 (lower is better)
Translates to: ITLKFRIKLKYF*LLGELPSPLPR
Trigger: TCTTGGCAGTGGACTTGGCAGTTCTCCCAGTAAGCAGAAGTACTTGAGCTTAATTCTGAACTTCAAAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 72 bp TTTCTGACACTGAAAAAGTGTATCAATCCAAATGAATaGGCCACTGGAGGAGGAAAGTGGTTTGTTGTTCAC +
Preference number: 3 (lower is better)
Translates to: FLTLKKCINPNE*ATGGGKWFVVH
Trigger: GTGAACAACAAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACTTTTTCAGTGTCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR-3UTR CAA 90 bp AGTTCAGAATTAAGCTCAAGTACTTCTGCTTACTGGGAGAACTGCCAAGTCCACAACATTAATAATCAGTaGCCCATGTCTTTCCTCACA +
Preference number: 3 (lower is better)
Translates to: SSELSSSTSAYWENCQVHNINNQ*PMSFLT
Trigger: TGTGAGGAAAGACATGGGCAACTGATTATTAATGTT...GTGGACTTGGCAGTTCTCCCAGTAAGCAGAAGTACTTGAGCTTAATTCTGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CCA 72 bp TTCACAATGCTTAAACAAACTGGTGGCCATGAGGTCTaGGACCACACACACATCATAAATGATGTATTGATA +
Preference number: 3 (lower is better)
Translates to: FTMLKQTGGHEV*DHTHIINDVLI
Trigger: TATCAATACATCATTTATGATGTGTGTGTGGTCCCAGACCTCATGGCCACCAGTTTGTTTAAGCATTGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 72 bp AAATACTCAGAAGTAACCAACATTACTGTGGATTGCTaGAGTTCTTATAAGGGGTACAATGTTTTAGCACCA +
Preference number: 3 (lower is better)
Translates to: KYSEVTNITVDC*SSYKGYNVLAP
Trigger: TGGTGCTAAAACATTGTACCCCTTATAAGAACTGCAGCAATCCACAGTAATGTTGGTTACTTCTGAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR TCA 72 bp GGAGATAAGAAAATGATCCAACTGTACTTTAGTATCTaGAGAAGACACATTCAGGAAGTCTATGTAAGTCCT +
Preference number: 3 (lower is better)
Translates to: GDKKMIQLYFSI*RRHIQEVYVSP
Trigger: AGGACTTACATAGACTTCCTGAATGTGTCTTCTTCAGATACTAAAGTACAGTTGGATCATTTTCTTATCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 72 bp ATCAAATACTCAGAAGTAACCAACATTACTGTGGATTaGTGCAGTTCTTATAAGGGGTACAATGTTTTAGCA +
Preference number: 3 (lower is better)
Translates to: IKYSEVTNITVD*CSSYKGYNVLA
Trigger: TGCTAAAACATTGTACCCCTTATAAGAACTGCAGCAATCCACAGTAATGTTGGTTACTTCTGAGTATTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR GCA 72 bp TCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTaGTTGATCCAGTTGTATTTGCTTATGAGTTTTTCT +
Preference number: 3 (lower is better)
Translates to: SFFPSNFSPSFH*LIQLYLLMSFS
Trigger: AGAAAAACTCATAAGCAAATACAACTGGATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAATGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503023.1
CDS-3UTR GCA 90 bp CAAACCTGCAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGTGCTCGGCCGGGCACTaGATCTCGGGCCGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QTCSPSPGATCASSPRRQCSAGH*ISGRGC
Trigger: GCAGCCGCGGCCCGAGATGCAGTGCCCGGCCGAGCA...CTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTGCAGGTTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp CAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGCTGTCAGCCACTGGCCAGTCCTTaGGTGGGTCGGTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: QPKPRSHLCIFATSPGCQPLASP*VGRWGR
Trigger: TCTACCCCACCGACCCACCCAAGGACTGGCCAGTGG...CTGACAGCCTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR TCA 90 bp CAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGCTGTCAGGAGCAAGCAGGTGGATCACCTaGGGCCAGGAGCTCGAGACC +
Preference number: 4 (lower is better)
Translates to: QAQEPPVHLRHVARLSGASRWIT*GQELET
Trigger: GGTCTCGAGCTCCTGGCCTCAGGTGATCCACCTGCT...TGCTCCTGACAGCCTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGCTGTCAGGAGCACCCAGGAGCCACCTGTaGATCTTCGCCACGTCGCCA +
Preference number: 4 (lower is better)
Translates to: QAQEPPVHLRHVARLSGAPRSHL*IFATSP
Trigger: TGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGG...TGCTCCTGACAGCCTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CCA 90 bp GCAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGCTGTCACCAGTGTGTCCCACCTaGTTGAGGTGGTTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: AAQAQEPPVHLRHVARLSPVCPT*LRWFLR
Trigger: TCTGAGGAACCACCTCAACCAGGTGGGACACACTGG...TGACAGCCTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp AGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGCTGTCAGGAGCATGCGTCTTGGCCAGTCCTTGGGTaGGTCGGTGGGGTAGACTGT +
Preference number: 4 (lower is better)
Translates to: RSHLCIFATSPGCQEHASWPVLG*VGGVDC
Trigger: ACAGTCTACCCCACCGACCCACCCAAGGACTGGCCA...AGACGCATGCTCCTGACAGCCTGGCGACGTGGCGAAGATGCACAGGTGGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR TCA 90 bp GCAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGCTGTCATCTCCTCACACACTCTaGCGGGGATGTTATAGTGCC +
Preference number: 4 (lower is better)
Translates to: AAQAQEPPVHLRHVARLSSPHTL*RGCYSA
Trigger: GGCACTATAACATCCCCGTCAGAGTGTGTGAGGAGA...TGACAGCCTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR GCA 90 bp CTGACCGCATCTGCAGGTGGGAACCAAGGCCCCAAACTGCACAGAGCCTCGGGGCAGGTTCACACAGTGTaGTGCTCCACCAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LTASAGGNQGPKLHRASGQVHTV*CSTSLH
Trigger: ATGGAGGCTGGTGGAGCAGCACACTGTGTGAACCTG...CCCCGAGGCTCTGTGCAGTTTGGGGCCTTGGTTCCCACCTGCAGATGCGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp GACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTGGCCACGCTTCGGGCTaGGGCATAGTCCCCCGACTC +
Preference number: 4 (lower is better)
Translates to: DILSNLAPRGPRVLLRDCGHASG*GIVPRL
Trigger: GAGTCGGGGGACTATGCCCCAGCCCGAAGCGTGGCC...ACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp CTGACCGCATCTGCAGGTGGGAACCAAGGCCCCAAACTGCACAGAGCCTCGGGGCCCACCTGGTTGAGGTaGTTCCTCAGAAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LTASAGGNQGPKLHRASGPTWLR*FLRSCP
Trigger: AGGACAGCTTCTGAGGAACCACCTCAACCAGGTGGG...CCCCGAGGCTCTGTGCAGTTTGGGGCCTTGGTTCCCACCTGCAGATGCGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp CAAACCTGCAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGCTAAACAAGCCAAGATaGGCGCTGCCAGGTTCACAC +
Preference number: 4 (lower is better)
Translates to: QTCSPSPGATCASSPRRQLNKPR*ALPGSH
Trigger: GTGTGAACCTGGCAGCGCTCATCTTGGCTTGTTTAG...CTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTGCAGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp AAACCTGCAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGAGGCTGTCAGGAGCATaGGTCTCTCATAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: KPAAQAQEPPVHLRHVARRLSGA*VSHRLV
Trigger: GACCAGTCTATGAGAGACGCATGCTCCTGACAGCCT...CCTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTGCAGGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR GCA 90 bp AAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCCCCAGGAGCCACCTGTaGATCTTCGCCACGTCGCCA +
Preference number: 4 (lower is better)
Translates to: KLVFRTSCPTWLPGAQGFPRSHL*IFATSP
Trigger: TGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGG...GAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR TCA 90 bp CAAACCTGCAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGTCTGCTGATGTCACCTaGCCAGCTCAAGACCAAGAA +
Preference number: 4 (lower is better)
Translates to: QTCSPSPGATCASSPRRQSADVT*PAQDQE
Trigger: TTCTTGGTCTTGAGCTGGTCAGGTGACATCAGCAGA...CTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTGCAGGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp CCTCCTGGTCATGGGCAAGCCCACCTCACACCTACTGCTAGTGACTTACAGGAACAGGAGCCAGGCAACTaGCCGCATCTGCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PPGHGQAHLTPTASDLQEQEPGN*PHLQVG
Trigger: TCCCACCTGCAGATGCGGTCAGTTGCCTGGCTCCTG...TTCCTGTAAGTCACTAGCAGTAGGTGTGAGGTGGGCTTGCCCATGACCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp GCTTCAGCAGTTCTCATTTCAGCCAAGCCTGCCCACTTCTTCCTCAGCAGAGTAGGCCACGCTTCGGGCTaGGGCATAGTCCCCCGACTC +
Preference number: 4 (lower is better)
Translates to: ASAVLISAKPAHFFLSRVGHASG*GIVPRL
Trigger: GAGTCGGGGGACTATGCCCCAGCCCGAAGCGTGGCC...TACTCTGCTGAGGAAGAAGTGGGCAGGCTTGGCTGAAATGAGAACTGCTGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503023.1
CDS-3UTR TCA 90 bp TCAAAAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGTCACCACCCTTAGCCTaGTTGGGCAGGCGATGGCTC +
Preference number: 4 (lower is better)
Translates to: SKASLQDILSNLAPRGPRSPPLA*LGRRWL
Trigger: GAGCCATCGCCTGCCCAATCAGGCTAAGGGTGGTGA...CCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp GTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTCTTAGAGGCCTGGCTCATGGCCTaGAACAGCGTGGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: VQLGSQGPKGSSQRLFLEAWLMA*NSVALS
Trigger: ACTGAGGGCCACGCTGTTCCAGGCCATGAGCCAGGC...CTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp TTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCACAGCCTGGCTCATaGCCTGGAACAGCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LPSGEDMVCTVQQVCSEGPQPGS*PGTAWP
Trigger: GGGCCACGCTGTTCCAGGCCATGAGCCAGGCTGTGG...GCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp TTCTCAGAGATTGTTCTTAGAGACCCCCAAACCTGCAGCCCAAGCCCAGGAGCCTGGCCAGTCCTTGGGTaGGTCGGTGGGGTAGACTGT +
Preference number: 4 (lower is better)
Translates to: FSEIVLRDPQTCSPSPGAWPVLG*VGGVDC
Trigger: ACAGTCTACCCCACCGACCCACCCAAGGACTGGCCA...GGCTCCTGGGCTTGGGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CCA 90 bp CCTTCTGGAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCCACATCCTGTCCAACTTaGCTCCCAGGGGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PSGEDMVCTVQQVCSEGPTSCPT*LPGAQG
Trigger: CCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGT...GGGGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CCA 90 bp ACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTCACCCCTCCTGGTCATaGGCAAGCCCACCTCACACC +
Preference number: 4 (lower is better)
Translates to: TSCPTWLPGAQGFFSEIVHPSWS*ASPPHT
Trigger: GGTGTGAGGTGGGCTTGCCCATGACCAGGAGGGGTG...AACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CAA 72 bp CTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATaGTTCTTAGAGACCCCCAAACCTGCAGCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LGSQGPKGSSQR*FLETPKPAAQA
Trigger: GGCTTGGGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR TCA 90 bp TCATCCCCTGACCCAGACGGGTTACACAGATCTGGCAGTGGACACACCCTCCAAGATCGTCCTCAGCAATaGGCGTTACCACTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SSPDPDGLHRSGSGHTLQDRPQQ*ALPLAS
Trigger: ACTGGCCAGTGGTAACGCTCATTGCTGAGGACGATC...TTGGAGGGTGTGTCCACTGCCAGATCTGTGTAACCCGTCTGGGTCAGGGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp AAACCTGCAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGAAGGCAGAGCTCTGCTaGCTCAAACTTCATTCTCTA +
Preference number: 4 (lower is better)
Translates to: KPAAQAQEPPVHLRHVARKAELC*LKLHSL
Trigger: TAGAGAATGAAGTTTGAGTCAGCAGAGCTCTGCCTT...CCTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTGCAGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp GTTAAGCACTGTGCTAACTGCTTCATCTCATCTAACTCTTCCACACTGCCCAATCGGGGTGCCAGGCAGTaGCCGCAGCCTCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VKHCANCFISSNSSTLPNRGARQ*PQPLSR
Trigger: GCGGCTGAGAGGCTGCGGCCACTGCCTGGCACCCCG...ATTGGGCAGTGTGGAAGAGTTAGATGAGATGAAGCAGTTAGCACAGTGCTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp AGCAGTTCTCATTTCAGCCAAGCCTGCCCACTTCTTCCTCAGCAGAGTAAGGGAGCCTGGCTCATGGCCTaGAACAGCGTGGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SSSHFSQACPLLPQQSKGAWLMA*NSVALS
Trigger: ACTGAGGGCCACGCTGTTCCAGGCCATGAGCCAGGC...TCCCTTACTCTGCTGAGGAAGAAGTGGGCAGGCTTGGCTGAAATGAGAACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR CCA 90 bp GGGTTCTTCTCAGAGATTGTTCTTAGAGACCCCCAAACCTGCAGCCCAAGCCCAGAGAGCCGGTACACCTaGATGGTGTGGCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GFFSEIVLRDPQTCSPSPESRYT*MVWRTA
Trigger: TGCTGTGCGCCACACCATCCAGGTGTACCGGCTCTC...TGGGCTTGGGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CCA 90 bp CAAAAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGAATGAGCGTTACCACTaGCCAGTCCTTGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: QKLVFRTSCPTWLPGAQGNERYH*PVLGWV
Trigger: GACCCACCCAAGGACTGGCCAGTGGTAACGCTCATT...CCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CCA 90 bp ACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTACATCCTGTCCAACTTaGCTCCCAGGGGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: TSCPTWLPGAQGFFSEIVTSCPT*LPGAQG
Trigger: CCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGT...AACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CCA 90 bp TACCACTTAAAGCAGACTGTTAGAAGCCCCCTCAGTGCAGTGGGCAGCACGTCAGCCCCCTCAGTGCAGTaGGCAGCACGTCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: YHLKQTVRSPLSAVGSTSAPSVQ*AARQSH
Trigger: ATGAGACTGACGTGCTGCCCACTGCACTGAGGGGGC...TGACGTGCTGCCCACTGCACTGAGGGGGCTTCTAACAGTCTGCTTTAAGTGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp AAACCTGCAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGGAGCAGGCGAAATTTTaGACACATGCGGAACATCTT +
Preference number: 4 (lower is better)
Translates to: KPAAQAQEPPVHLRHVAREQAKF*THAEHL
Trigger: AAGATGTTCCGCATGTGTCCAAAATTTCGCCTGCTC...CCTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTGCAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp GCTGCCAGGTTCACACAGTGTGCTGCTCCACCAGCCTCCATTCACAATGGCTTAGACCGCATCTGCAGGTaGGAACCAAGGCCCCAAACT +
Preference number: 4 (lower is better)
Translates to: AARFTQCAAPPASIHNGLDRICR*EPRPQT
Trigger: AGTTTGGGGCCTTGGTTCCCACCTGCAGATGCGGTC...TAAGCCATTGTGAATGGAGGCTGGTGGAGCAGCACACTGTGTGAACCTGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp TTCTCAGAGATTGTTCTTAGAGACCCCCAAACCTGCAGCCCAAGCCCAGGAGCCGATCGTCCTCAGCAATaGGCGTTACCACTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: FSEIVLRDPQTCSPSPGADRPQQ*ALPLAS
Trigger: ACTGGCCAGTGGTAACGCTCATTGCTGAGGACGATC...GGCTCCTGGGCTTGGGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR TCA 90 bp TCATCCCCTGACCCAGACGGGTTACACAGATCTGGCAGTGGACACACCCTCCAATGTCTCCGGTTCATGTaGACACCATCTGCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SSPDPDGLHRSGSGHTLQCLRFM*TPSAVH
Trigger: GTGGACTGCAGATGGTGTTCACATGAACCGGAGACA...TTGGAGGGTGTGTCCACTGCCAGATCTGTGTAACCCGTCTGGGTCAGGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp TCATCCCCTGACCCAGACGGGTTACACAGATCTGGCAGTGGACACACCCTCCAAGGCAGGAGAACTGCTTaGACCAGGAGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SSPDPDGLHRSGSGHTLQGRRTA*TRRQKL
Trigger: CAACTTTTGCCTCCTGGTTCAAGCAGTTCTCCTGCC...TTGGAGGGTGTGTCCACTGCCAGATCTGTGTAACCCGTCTGGGTCAGGGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp ACAAGCTATCTGTCTTGCTTCAGCAGTTCTCATTTCAGCCAAGCCTGCCCACTTCCACAGCCTGGCTCATaGCCTGGAACAGCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TSYLSCFSSSHFSQACPLPQPGS*PGTAWP
Trigger: GGGCCACGCTGTTCCAGGCCATGAGCCAGGCTGTGG...AAGTGGGCAGGCTTGGCTGAAATGAGAACTGCTGAAGCAAGACAGATAGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR CCA 90 bp CAAAAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGCTTCCGTGTTGTACTTaGAGAGCCGGTACACCTGGA +
Preference number: 4 (lower is better)
Translates to: QKLVFRTSCPTWLPGAQGLPCCT*RAGTPG
Trigger: TCCAGGTGTACCGGCTCTCCAAGTACAACACGGAAG...CCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CCA 90 bp CTCCCTAAACCCTTGATTCCTCTGCTCACAATGGCCAGGGGTCAAGAGTCAGCCAATGAGCGTTACCACTaGCCAGTCCTTGGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LPKPLIPLLTMARGQESANERYH*PVLGWV
Trigger: GACCCACCCAAGGACTGGCCAGTGGTAACGCTCATT...GGCTGACTCTTGACCCCTGGCCATTGTGAGCAGAGGAATCAAGGGTTTAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp AAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCACACAGATCTGGCAGTaGACACACCCTCCAACACAG +
Preference number: 4 (lower is better)
Translates to: KLVFRTSCPTWLPGAQGFTQIWQ*THPPTQ
Trigger: CTGTGTTGGAGGGTGTGTCCACTGCCAGATCTGTGT...GAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp GGGCCCAAGGGTTCTTCTCAGAGATTGTTCTTAGAGACCCCCAAACCTGCAGCCCTGTCCTGGGTCATTTaGTGTGTCCCGAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: GPKGSSQRLFLETPKPAALSWVI*CVPSKQ
Trigger: CTGTTTGCTCGGGACACATCAAATGACCCAGGACAG...GGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp CCTCCTGGTCATGGGCAAGCCCACCTCACACCTACTGCTAGTGACTTACAGGAAGCCTCCCTAAACCCTTaGTTCCTCTGCTCACAATGG +
Preference number: 4 (lower is better)
Translates to: PPGHGQAHLTPTASDLQEASLNP*FLCSQW
Trigger: CCATTGTGAGCAGAGGAATCAAGGGTTTAGGGAGGC...TTCCTGTAAGTCACTAGCAGTAGGTGTGAGGTGGGCTTGCCCATGACCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp AAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCAATCCACACCACCACTaGGACAGACTGTGTGTGGTA +
Preference number: 4 (lower is better)
Translates to: KLVFRTSCPTWLPGAQGFNPHHH*DRLCVV
Trigger: TACCACACACAGTCTGTCTCAGTGGTGGTGTGGATT...GAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CTTCCTCAGCAGAGTAAGGGACTCTTTAATTTTATCAACCAGGTCCTCATTCTTTGCTCGGCCGGGCACTaGATCTCGGGCCGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LPQQSKGLFNFINQVLILCSAGH*ISGRGC
Trigger: GCAGCCGCGGCCCGAGATGCAGTGCCCGGCCGAGCA...AAGAATGAGGACCTGGTTGATAAAATTAAAGAGTCCCTTACTCTGCTGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503023.1
CDS-3UTR GCA 90 bp AAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCGGAGAAGATATGGTTTaGACCGTCCAACAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: KLVFRTSCPTWLPGAQGFGEDMV*TVQQVC
Trigger: GCACACCTGTTGGACGGTGCAAACCATATCTTCTCC...GAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR GCA 90 bp GCAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGCTGTCATATCATTTTGAAGACTaGTCTAAGTGGAACATCCTC +
Preference number: 4 (lower is better)
Translates to: AAQAQEPPVHLRHVARLSYHFED*SKWNIL
Trigger: GAGGATGTTCCACTTAGAGCAGTCTTCAAAATGATA...TGACAGCCTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp TCTTCTCAGAGATTGTTCTTAGAGACCCCCAAACCTGCAGCCCAAGCCCAGGAGGGTCTGCCTTGCGGGTaGCAGAAAGTTAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: SSQRLFLETPKPAAQAQEGLPCG*QKVRAQ
Trigger: TTGGGCTCTAACTTTCTGGCACCCGCAAGGCAGACC...CTCCTGGGCTTGGGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp TTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCGCTGCAGCCCTGCTTTaGAGGTCTGGAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: LPSGEDMVCTVQQVCSEGAAALL*RSGGSS
Trigger: GGAAGATCCTCCAGACCTGCAAAGCAGGGCTGCAGC...GCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp TTCCTCAGCAGAGTAAGGGACTCTTTAATTTTATCAACCAGGTCCTCATTCTTCCGGGGTGCCAGGCAGTaGCCGCAGCCTCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: FLSRVRDSLILSTRSSFFRGARQ*PQPLSR
Trigger: GCGGCTGAGAGGCTGCGGCCACTGCCTGGCACCCCG...GAAGAATGAGGACCTGGTTGATAAAATTAAAGAGTCCCTTACTCTGCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503023.1
CDS-3UTR CCA 90 bp TTCACTAAACCACTGTTCTGTTCAACGTGGCACTGGCTCCCTAGTCTTCCCATCGAGAGCCGGTACACCTaGATGGTGTGGCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: FTKPLFCSTWHWLPSLPIESRYT*MVWRTA
Trigger: TGCTGTGCGCCACACCATCCAGGTGTACCGGCTCTC...GATGGGAAGACTAGGGAGCCAGTGCCACGTTGAACAGAACAGTGGTTTAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp TCAAAAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGCTTCCGTGTTGTACTTaGAGAGCCGGTACACCTGGA +
Preference number: 4 (lower is better)
Translates to: SKASLQDILSNLAPRGPRLPCCT*RAGTPG
Trigger: TCCAGGTGTACCGGCTCTCCAAGTACAACACGGAAG...CCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CCA 90 bp GAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCCCACTGAACGGGTTACACAGATCTaGCAGTGGACACACCCTCCA +
Preference number: 4 (lower is better)
Translates to: EKIWFAPSNRCALKAPTERVTQI*QWTHPP
Trigger: TGGAGGGTGTGTCCACTGCCAGATCTGTGTAACCCG...TTCAGTGGGGGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp GGGCCCAAGGGTTCTTCTCAGAGATTGTTCTTAGAGACCCCCAAACCTGCAGCCACTATGCACCTAATTTaGCTGGCAGGGTTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GPKGSSQRLFLETPKPAATMHLI*LAGLGA
Trigger: TGCCCCCAACCCTGCCAGCCAAATTAGGTGCATAGT...GGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CAA 72 bp CTCTTCCACACTGCCCAATACTGCCTCCCTAAACCCTaGATTCCTCTGCTCACAATGGCCAGGGGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LFHTAQYCLPKP*IPLLTMARGQE
Trigger: CTCTTGACCCCTGGCCATTGTGAGCAGAGGAATCAAGGGTTTAGGGAGGCAGTATTGGGCAGTGTGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp GTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTCTTAGAGCCAACAGGTGTGCTCTaGAGGCCCCCACTGAAATAT +
Preference number: 4 (lower is better)
Translates to: VQLGSQGPKGSSQRLFLEPTGVL*RPPLKY
Trigger: ATATTTCAGTGGGGGCCTTCAGAGCACACCTGTTGG...CTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR TCA 90 bp GAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCCCACTGAACCAACAGGTGTGCTCTaGAGGCCCCCACTGAAATAT +
Preference number: 4 (lower is better)
Translates to: EKIWFAPSNRCALKAPTEPTGVL*RPPLKY
Trigger: ATATTTCAGTGGGGGCCTTCAGAGCACACCTGTTGG...TTCAGTGGGGGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR TCA 90 bp CTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCCAACTTCTAATCTGCTaGTGTCACCTGACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LVFRTSCPTWLPGAQGFFQLLIC*CHLTSS
Trigger: TGAGCTGGTCAGGTGACATCAGCAGATTAGAAGTTG...GAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp TGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCAGCGGGAATGCTGTTaGATCCAGACCCAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: CLLEKIWFAPSNRCALKAQRECC*IQTQAE
Trigger: TTCAGCTTGGGTCTGGATTCAACAGCATTCCCGCTG...GGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp GAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCCCACTGAACATTTCAGCCAAGCCTaGCCACTTCTTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: EKIWFAPSNRCALKAPTEHFSQA*PLLPQQ
Trigger: CTGCTGAGGAAGAAGTGGGCAGGCTTGGCTGAAATG...TTCAGTGGGGGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CCTCCTGGTCATGGGCAAGCCCACCTCACACCTACTGCTAGTGACTTACAGGAAGGAGAAGATATGGTTTaGACCGTCCAACAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PPGHGQAHLTPTASDLQEGEDMV*TVQQVC
Trigger: GCACACCTGTTGGACGGTGCAAACCATATCTTCTCC...TTCCTGTAAGTCACTAGCAGTAGGTGTGAGGTGGGCTTGCCCATGACCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp ACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTGTTCACACAGTGTGCTaGTCCACCAGCCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: TSCPTWLPGAQGFFSEIVVHTVC*STSLHS
Trigger: TGAATGGAGGCTGGTGGAGCAGCACACTGTGTGAAC...AACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CTGACCGCATCTGCAGGTGGGAACCAAGGCCCCAAACTGCACAGAGCCTCGGGGAGTAGAGGGAGAAAGTaGATTTCTGACACTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LTASAGGNQGPKLHRASGSRGRK*ISDTEK
Trigger: TTTTTCAGTGTCAGAAATGCACTTTCTCCCTCTACT...CCCCGAGGCTCTGTGCAGTTTGGGGCCTTGGTTCCCACCTGCAGATGCGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp AAACCTGCAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGAAAGTATTTGCCTTCTaGAGAAGATATGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: KPAAQAQEPPVHLRHVARKVFAF*RRYGLH
Trigger: GTGCAAACCATATCTTCTCCAGAAGGCAAATACTTT...CCTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTGCAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CCA 90 bp GAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCCCACTGAATTCCTCTGCTCACAATaGCCAGGGGTCAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: EKIWFAPSNRCALKAPTEFLCSQ*PGVKSQ
Trigger: CTGACTCTTGACCCCTGGCCATTGTGAGCAGAGGAA...TTCAGTGGGGGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp TTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCAGTACCTACCCACTaGGTTCTTCAGAAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LPSGEDMVCTVQQVCSEGPVPTH*VLQKPS
Trigger: GCTGGGCTTCTGAAGAACCCAGTGGGTAGGTACTGG...GCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp GGTTCTTCTCAGAGATTGTTCTTAGAGACCCCCAAACCTGCAGCCCAAGCCCAGCTCGCCGTATGGAGGTaGACTTCTGAGAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: GSSQRLFLETPKPAAQAQLAVWR*TSEKPL
Trigger: AAGAGGTTTCTCAGAAGTTCACCTCCATACGGCGAG...CTGGGCTTGGGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp GGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTCTTAGAGACCCCCAAACAGACTCTAGTTCTTTaGCAAACAGGAAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GSQGPKGSSQRLFLETPKQTLVL*QTGRQS
Trigger: GCTCTGCCTTCCTGTTTGTCAAAGAACTAGAGTCTG...TTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp GACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTCACTGTCCACAGAGTTaGGCAGAGCATCGTAATTCA +
Preference number: 4 (lower is better)
Translates to: DILSNLAPRGPRVLLRDCHCPQS*AEHRNS
Trigger: TGAATTACGATGCTCTGCTCAACTCTGTGGACAGTG...ACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp CACTTCTTCCTCAGCAGAGTAAGGGACTCTTTAATTTTATCAACCAGGTCCTCAAGCAGCGTACCAGCATaGGCTCCGGGTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HFFLSRVRDSLILSTRSSSSVPA*APGPAA
Trigger: GGCTGCAGGACCCGGAGCTCATGCTGGTACGCTGCT...TGAGGACCTGGTTGATAAAATTAAAGAGTCCCTTACTCTGCTGAGGAAGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514913.1
CDS-3UTR GCA 90 bp CTGACCGCATCTGCAGGTGGGAACCAAGGCCCCAAACTGCACAGAGCCTCGGGGTCCAGTCTTCAAAAATaGCTTGAAATAACCCACTTT +
Preference number: 4 (lower is better)
Translates to: LTASAGGNQGPKLHRASGSSLQK*LEITHF
Trigger: AAAGTGGGTTATTTCAAGGCATTTTTGAAGACTGGA...CCCCGAGGCTCTGTGCAGTTTGGGGCCTTGGTTCCCACCTGCAGATGCGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp ACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTGTGACTTACAGGAAATaGCAGAAGTGGCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: TSCPTWLPGAQGFFSEIVVTYRK*QKWQAV
Trigger: GACAGCCTGCCACTTCTGGCATTTCCTGTAAGTCAC...AACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCAAGGTATGCTGTGACTaGAGACCAACACGCATATAC +
Preference number: 4 (lower is better)
Translates to: LVFRTSCPTWLPGAQGFFKVCCD*RPTRIY
Trigger: GTATATGCGTGTTGGTCTGCAGTCACAGCATACCTT...GAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp GGGCCCAAGGGTTCTTCTCAGAGATTGTTCTTAGAGACCCCCAAACCTGCAGCCATCATAGGTCTGCCTTaGGGGTGCCAGAAAGTTAGA +
Preference number: 4 (lower is better)
Translates to: GPKGSSQRLFLETPKPAAIIGLP*GCQKVR
Trigger: TCTAACTTTCTGGCACCCGCAAGGCAGACCTATGAT...GGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp GTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTCTTAGAGACAAGACCCACAGCCTaGATCCCTGTTTTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: VQLGSQGPKGSSQRLFLETRPTA*IPVFLS
Trigger: GGAGAGAAAAACAGGGATGCAGGCTGTGGGTCTTGT...CTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp CCTCCTGGTCATGGGCAAGCCCACCTCACACCTACTGCTAGTGACTTACAGGAACTTCTGGAGAAGATATaGTTTGCACCGTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: PPGHGQAHLTPTASDLQELLEKI*FAPSNR
Trigger: CCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAG...TTCCTGTAAGTCACTAGCAGTAGGTGTGAGGTGGGCTTGCCCATGACCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp TCTGCCAATACACAGGGTCCAAAACTCCTAAACTCTTGCAAGACACTCTGGGATCACACACACCCCTCCTaGTCATGGGCAAGCCCACCT +
Preference number: 4 (lower is better)
Translates to: SANTQGPKLLNSCKTLWDHTHPS*SWASPP
Trigger: AGGTGGGCTTGCCCATGACCAGGAGGGGTGTGTGTG...ATCCCAGAGTGTCTTGCAAGAGTTTAGGAGTTTTGGACCCTGTGTATTGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp TCAAAAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGACTGGAGGAGGAAAGTaGTTTGTTGTTCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: SKASLQDILSNLAPRGPRTGGGK*FVVHSG
Trigger: CCCACTGTGAACAACAAACCACTTTCCTCCTCCAGT...CCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp CTTGCTTCAGCAGTTCTCATTTCAGCCAAGCCTGCCCACTTCTTCCTCAGCAGACTCGCCGTATGGAGGTaGACTTCTGAGAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: LASAVLISAKPAHFFLSRLAVWR*TSEKPL
Trigger: AAGAGGTTTCTCAGAAGTTCACCTCCATACGGCGAG...TCTGCTGAGGAAGAAGTGGGCAGGCTTGGCTGAAATGAGAACTGCTGAAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR TCA 90 bp GCTTCAGCAGTTCTCATTTCAGCCAAGCCTGCCCACTTCTTCCTCAGCAGAGTACTCGCCGTATGGAGGTaGACTTCTGAGAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: ASAVLISAKPAHFFLSRVLAVWR*TSEKPL
Trigger: AAGAGGTTTCTCAGAAGTTCACCTCCATACGGCGAG...TACTCTGCTGAGGAAGAAGTGGGCAGGCTTGGCTGAAATGAGAACTGCTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR TCA 90 bp ACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTCATAAAGGTATGCTGTaGCTGCAGACCAACACGCAT +
Preference number: 4 (lower is better)
Translates to: TSCPTWLPGAQGFFSEIVHKGML*LQTNTH
Trigger: ATGCGTGTTGGTCTGCAGTCACAGCATACCTTTATG...AACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp GCTGCCAGGTTCACACAGTGTGCTGCTCCACCAGCCTCCATTCACAATGGCTTAGTCCCTTCCTTGTACTaGTCGATGTTTTGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: AARFTQCAAPPASIHNGLVPSLY*SMFWQF
Trigger: AAACTGCCAAAACATCGATCAGTACAAGGAAGGGAC...TAAGCCATTGTGAATGGAGGCTGGTGGAGCAGCACACTGTGTGAACCTGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CTCCATCTTGCAAGACTCCCAGACTCTAGTTCTTTGACAAACAGGAAGGCAGAGAGCCAAGATGAGCGCTaGCAGGTTCACACAGTGTGC +
Preference number: 4 (lower is better)
Translates to: LHLARLPDSSSLTNRKAESQDER*QVHTVC
Trigger: GCACACTGTGTGAACCTGGCAGCGCTCATCTTGGCT...CTCTGCCTTCCTGTTTGTCAAAGAACTAGAGTCTGGGAGTCTTGCAAGATGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp ATGCTGAGATGGCAGAAGTGCTGTATCATTAAAGGTGATTCAGCACTTCACAGCACCAAGGCCCCAAACTaGACAGAGCCTCGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: MLRWQKCCIIKGDSALHSTKAPN*TEPRGH
Trigger: ATGCCCCCGAGGCTCTGTGCAGTTTGGGGCCTTGGT...GCTGTGAAGTGCTGAATCACCTTTAATGATACAGCACTTCTGCCATCTCAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp AACCAGGTCCTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTGCTTGATCCACAGCCTGGCTCATaGCCTGGAACAGCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: NQVLILPIKFQSKFPLLDPQPGS*PGTAWP
Trigger: GGGCCACGCTGTTCCAGGCCATGAGCCAGGCTGTGG...ATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAGGACCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR CCA 90 bp TGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCTTCTGGAGAAGATATaGTTTGCACCGTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: CLLEKIWFAPSNRCALKALLEKI*FAPSNR
Trigger: CCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAG...GGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CCA 90 bp CTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCACGGAACTAAGATTCTaGGCAACTGAAGCTGCATAT +
Preference number: 4 (lower is better)
Translates to: LVFRTSCPTWLPGAQGFFTELRF*ATEAAY
Trigger: ATATGCAGCTTCAGTTGCCCAGAATCTTAGTTCCGT...GAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp CTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTTTTGCAGTAGTCCATaGTATCCATTTCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: LVFRTSCPTWLPGAQGFFFCSSP*YPFQEL
Trigger: TAGCTCCTGAAATGGATATCATGGACTACTGCAAAA...GAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp CCTCTGATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAAAGTGTCTGTCCACACTaGTGGGGCACCACCTGCACC +
Preference number: 4 (lower is better)
Translates to: PLIQKYLPSGEDMVCTVQSVCPH*WGTTCT
Trigger: GGTGCAGGTGGTGCCCCATCAGTGTGGACAGACACT...TTGGACGGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTATCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp AGTTCAGAATTAAGCTCAAGTACTTCTGCTTACTGGGAGAACTGCCAAGTCCACCTGTCACTCATCCCCTaGCCCAGACGGGTTACACAG +
Preference number: 4 (lower is better)
Translates to: SSELSSSTSAYWENCQVHLSLIP*PRRVTQ
Trigger: CTGTGTAACCCGTCTGGGTCAGGGGATGAGTGACAG...GTGGACTTGGCAGTTCTCCCAGTAAGCAGAAGTACTTGAGCTTAATTCTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp TACCACTTAAAGCAGACTGTTAGAAGCCCCCTCAGTGCAGTGGGCAGCACGTCACAGATTCAATGTACCTaGAGGGCACAGATCTCTACT +
Preference number: 4 (lower is better)
Translates to: YHLKQTVRSPLSAVGSTSQIQCT*RAQIST
Trigger: AGTAGAGATCTGTGCCCTTCAGGTACATTGAATCTG...TGACGTGCTGCCCACTGCACTGAGGGGGCTTCTAACAGTCTGCTTTAAGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp TTCACTAAACCACTGTTCTGTTCAACGTGGCACTGGCTCCCTAGTCTTCCCATCTCAAAGGCAAGCATTTaGCCACAGCAACAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FTKPLFCSTWHWLPSLPISKASI*PQQQSQ
Trigger: CTGGCTCTGTTGCTGTGGTCAAATGCTTGCCTTTGA...GATGGGAAGACTAGGGAGCCAGTGCCACGTTGAACAGAACAGTGGTTTAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp ATCACAAGCTATCTGTCTTGCTTCAGCAGTTCTCATTTCAGCCAAGCCTGCCCACAGCGTGGCCCTCAGTaGACAGTAATTATCACCACG +
Preference number: 4 (lower is better)
Translates to: ITSYLSCFSSSHFSQACPQRGPQ*TVIITT
Trigger: CGTGGTGATAATTACTGTGCACTGAGGGCCACGCTG...TGGGCAGGCTTGGCTGAAATGAGAACTGCTGAAGCAAGACAGATAGCTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR GCA 90 bp TCATCCCCTGACCCAGACGGGTTACACAGATCTGGCAGTGGACACACCCTCCAAAACATTACTGTGGATTaGTGCAGTTCTTATAAGGGG +
Preference number: 4 (lower is better)
Translates to: SSPDPDGLHRSGSGHTLQNITVD*CSSYKG
Trigger: CCCCTTATAAGAACTGCAGCAATCCACAGTAATGTT...TTGGAGGGTGTGTCCACTGCCAGATCTGTGTAACCCGTCTGGGTCAGGGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CTGAAAAAGTGTATCAATCCAAATGAATGGGCCACTGGAGGAGGAAAGTGGTTTGCAACTGACCGCATCTaGAGGTGGGAACCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LKKCINPNEWATGGGKWFATDRI*RWEPRP
Trigger: GGGCCTTGGTTCCCACCTGCAGATGCGGTCAGTTGC...AAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACTTTTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CTCCATCTTGCAAGACTCCCAGACTCTAGTTCTTTGACAAACAGGAAGGCAGAGCACACCAAACCTCTTTaGGGCAAACACACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LHLARLPDSSSLTNRKAEHTKPL*GKHTAG
Trigger: CCCTGCTGTGTGTTTGCCGCAAAGAGGTTTGGTGTG...CTCTGCCTTCCTGTTTGTCAAAGAACTAGAGTCTGGGAGTCTTGCAAGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp GGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTCTTAGAGACCCCCAAAAAACTACAGAAAGAATaGCCAGGTTTCAGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: GSQGPKGSSQRLFLETPKKLQKE*PGFRQD
Trigger: GTCTTGCCTGAAACCTGGGCATTCTTTCTGTAGTTT...TTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp TCTTGCTTCAGCAGTTCTCATTTCAGCCAAGCCTGCCCACTTCTTCCTCAGCAGAGTTTTTCTGGTAACTaGAGCAGCAGCGTACCAGCA +
Preference number: 4 (lower is better)
Translates to: SCFSSSHFSQACPLLPQQSFSGN*SSSVPA
Trigger: TGCTGGTACGCTGCTGCTGCAGTTACCAGAAAAACT...CTGCTGAGGAAGAAGTGGGCAGGCTTGGCTGAAATGAGAACTGCTGAAGCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514913.1
CDS-3UTR CCA 90 bp GAGGGGAAAGACTTGGTTAATTTCTCTTATCAAAAGCTAGTCTTCAGGACATCCCCACTGGCCAGTCCTTaGGTGGGTCGGTGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: EGKDLVNFSYQKLVFRTSPLASP*VGRWGR
Trigger: TCTACCCCACCGACCCACCCAAGGACTGGCCAGTGG...GGATGTCCTGAAGACTAGCTTTTGATAAGAGAAATTAACCAAGTCTTTCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CCA 90 bp GCTGCCAGGTTCACACAGTGTGCTGCTCCACCAGCCTCCATTCACAATGGCTTATCCTCTGAAAGCAGGTaGATACAAACTGTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: AARFTQCAAPPASIHNGLSSESR*IQTVWL
Trigger: TAGCCAAACAGTTTGTATCCACCTGCTTTCAGAGGA...TAAGCCATTGTGAATGGAGGCTGGTGGAGCAGCACACTGTGTGAACCTGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp CCTTCTGGAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCCTACCTCAAAGTAATTTaGCCTTTGGTTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PSGEDMVCTVQQVCSEGPYLKVI*PLVPPL
Trigger: CAGAGGAGGAACCAAAGGCCAAATTACTTTGAGGTA...GGGGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp CTCCATCTTGCAAGACTCCCAGACTCTAGTTCTTTGACAAACAGGAAGGCAGAGGGTGGCCATGAGGTCTaGGACCACACACACATCATA +
Preference number: 4 (lower is better)
Translates to: LHLARLPDSSSLTNRKAEGGHEV*DHTHII
Trigger: TATGATGTGTGTGTGGTCCCAGACCTCATGGCCACC...CTCTGCCTTCCTGTTTGTCAAAGAACTAGAGTCTGGGAGTCTTGCAAGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp TGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCATCAATCCAAATGAATaGGCCACTGGAGGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: CLLEKIWFAPSNRCALKAINPNE*ATGGGK
Trigger: CTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGAT...GGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CAA 72 bp ATCCAAATGAATGGGCCACTGGAGGAGGAAAGTGGTTaGTTGTTCACAGTGGGGAGGTCTTTCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: IQMNGPLEEESG*LFTVGRSFCCT
Trigger: TGTGCAGCAGAAAGACCTCCCCACTGTGAACAACAAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp GCTTCAGCAGTTCTCATTTCAGCCAAGCCTGCCCACTTCTTCCTCAGCAGAGTACCTCCGCCTCATTTGTaGATAGTTCATCACAAGCTA +
Preference number: 4 (lower is better)
Translates to: ASAVLISAKPAHFFLSRVPPPHL*IVHHKL
Trigger: TAGCTTGTGATGAACTATTCACAAATGAGGCGGAGG...TACTCTGCTGAGGAAGAAGTGGGCAGGCTTGGCTGAAATGAGAACTGCTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR TCA 90 bp GTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTCTTAGAGTCTGAAGGCCCCCACTaGAATATATTGCATCATAGA +
Preference number: 4 (lower is better)
Translates to: VQLGSQGPKGSSQRLFLESEGPH*NILHHR
Trigger: TCTATGATGCAATATATTTCAGTGGGGGCCTTCAGA...CTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR TCA 90 bp AAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCCTGTACTTTAGTATCTaGAGAAGACACATTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KLVFRTSCPTWLPGAQGFLYFSI*RRHIQE
Trigger: TTCCTGAATGTGTCTTCTTCAGATACTAAAGTACAG...GAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp CCTCTGATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAAACATTTCAACCAGCATaGGCTCCGGGTCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PLIQKYLPSGEDMVCTVQTFQPA*APGPAA
Trigger: GGCTGCAGGACCCGGAGCTCATGCTGGTTGAAATGT...TTGGACGGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTATCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506417.1
CDS-3UTR GCA 90 bp TTCATCACAAGCTATCTGTCTTGCTTCAGCAGTTCTCATTTCAGCCAAGCCTGCCAGCGTGGCCCTCAGTaGACAGTAATTATCACCACG +
Preference number: 4 (lower is better)
Translates to: FITSYLSCFSSSHFSQACQRGPQ*TVIITT
Trigger: CGTGGTGATAATTACTGTGCACTGAGGGCCACGCTG...GCAGGCTTGGCTGAAATGAGAACTGCTGAAGCAAGACAGATAGCTTGTGATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR GCA 90 bp CCTCCTGGTCATGGGCAAGCCCACCTCACACCTACTGCTAGTGACTTACAGGAAACAAGCTATCTGTCTTaGTTCAGCAGTTCTCATTTC +
Preference number: 4 (lower is better)
Translates to: PPGHGQAHLTPTASDLQETSYLS*FSSSHF
Trigger: GAAATGAGAACTGCTGAAGCAAGACAGATAGCTTGT...TTCCTGTAAGTCACTAGCAGTAGGTGTGAGGTGGGCTTGCCCATGACCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CAAAAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGGAAATTTTGGACACATaGGGAACATCTTATGGTGTA +
Preference number: 4 (lower is better)
Translates to: QKLVFRTSCPTWLPGAQGEILDT*GTSYGV
Trigger: TACACCATAAGATGTTCCGCATGTGTCCAAAATTTC...CCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp GGGTTCTTCTCAGAGATTGTTCTTAGAGACCCCCAAACCTGCAGCCCAAGCCCAAATGGTTTATGCTTCTaGCTTTCAAAGGGGAGTACC +
Preference number: 4 (lower is better)
Translates to: GFFSEIVLRDPQTCSPSPNGLCF*LSKGST
Trigger: GGTACTCCCCTTTGAAAGCCAGAAGCATAAACCATT...TGGGCTTGGGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp TTCACTAAACCACTGTTCTGTTCAACGTGGCACTGGCTCCCTAGTCTTCCCATCCCTCCGCCTCATTTGTaGATAGTTCATCACAAGCTA +
Preference number: 4 (lower is better)
Translates to: FTKPLFCSTWHWLPSLPIPPPHL*IVHHKL
Trigger: TAGCTTGTGATGAACTATTCACAAATGAGGCGGAGG...GATGGGAAGACTAGGGAGCCAGTGCCACGTTGAACAGAACAGTGGTTTAGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp TCCTCTGATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCATGTGTCCCACCTGGTTaGGGTGGTTCCTCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SSDTKVFAFWRRYGLHRPCVPPG*GGSSEA
Trigger: AGCTTCTGAGGAACCACCTCAACCAGGTGGGACACA...TGGACGGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTATCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp AGTGTATCAATCCAAATGAATGGGCCACTGGAGGAGGAAAGTGGTTTGTTGTTCTCTCCTCACACACTCTaGCGGGGATGTTATAGTGCC +
Preference number: 4 (lower is better)
Translates to: SVSIQMNGPLEEESGLLFSPHTL*RGCYSA
Trigger: GGCACTATAACATCCCCGTCAGAGTGTGTGAGGAGA...GAACAACAAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp GTTAAGCACTGTGCTAACTGCTTCATCTCATCTAACTCTTCCACACTGCCCAATCAGCGTGGCCCTCAGTaGACAGTAATTATCACCACG +
Preference number: 4 (lower is better)
Translates to: VKHCANCFISSNSSTLPNQRGPQ*TVIITT
Trigger: CGTGGTGATAATTACTGTGCACTGAGGGCCACGCTG...ATTGGGCAGTGTGGAAGAGTTAGATGAGATGAAGCAGTTAGCACAGTGCTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CTCCCTAAACCCTTGATTCCTCTGCTCACAATGGCCAGGGGTCAAGAGTCAGCCAGTCCAAGTTTCCATTaGTTGATCCAGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: LPKPLIPLLTMARGQESASPSFH*LIQLYL
Trigger: CAAATACAACTGGATCAAGCAATGGAAACTTGGACT...GGCTGACTCTTGACCCCTGGCCATTGTGAGCAGAGGAATCAAGGGTTTAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp ATGCTGAGATGGCAGAAGTGCTGTATCATTAAAGGTGATTCAGCACTTCACAGCAGGCTGTCAGGAGCATaGGTCTCTCATAGACTGGTC +
Preference number: 4 (lower is better)
Translates to: MLRWQKCCIIKGDSALHSRLSGA*VSHRLV
Trigger: GACCAGTCTATGAGAGACGCATGCTCCTGACAGCCT...GCTGTGAAGTGCTGAATCACCTTTAATGATACAGCACTTCTGCCATCTCAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp GGGTTCTTCTCAGAGATTGTTCTTAGAGACCCCCAAACCTGCAGCCCAAGCCCATCAAAGGGGAGTACCTaGAAAGTACTGCTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: GFFSEIVLRDPQTCSPSPSKGST*KVLLKK
Trigger: TTTCTTAAGCAGTACTTTGCAGGTACTCCCCTTTGA...TGGGCTTGGGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp TTCACTAAACCACTGTTCTGTTCAACGTGGCACTGGCTCCCTAGTCTTCCCATCAACTGCCAAGTCCACTaGCAAGACTGTGGACATTTT +
Preference number: 4 (lower is better)
Translates to: FTKPLFCSTWHWLPSLPINCQVH*QDCGHF
Trigger: AAAATGTCCACAGTCTTGGCAGTGGACTTGGCAGTT...GATGGGAAGACTAGGGAGCCAGTGCCACGTTGAACAGAACAGTGGTTTAGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CCGTCCAACAGGTGTGCTCTGAAGGCCCCCACTGAAATATATTGCATCATAGATCACACTGCCCAATACTaGCTCCCTAAACCCTTGATT +
Preference number: 4 (lower is better)
Translates to: PSNRCALKAPTEIYCIIDHTAQY*LPKPLI
Trigger: AATCAAGGGTTTAGGGAGGCAGTATTGGGCAGTGTG...ATCTATGATGCAATATATTTCAGTGGGGGCCTTCAGAGCACACCTGTTGGACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp TCCTCTGATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCATGGCCTGGAACAGCGTaGCCCTCAGTGCACAGTAAT +
Preference number: 4 (lower is better)
Translates to: SSDTKVFAFWRRYGLHRPWPGTA*PSVHSN
Trigger: ATTACTGTGCACTGAGGGCCACGCTGTTCCAGGCCA...TGGACGGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTATCAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp TTTGTGAATAGTTCATCACAAGCTATCTGTCTTGCTTCAGCAGTTCTCATTTCAGCCTGGCTCATGGCCTaGAACAGCGTGGCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: FVNSSSQAICLASAVLISAWLMA*NSVALS
Trigger: ACTGAGGGCCACGCTGTTCCAGGCCATGAGCCAGGC...TGAAATGAGAACTGCTGAAGCAAGACAGATAGCTTGTGATGAACTATTCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR TCA 90 bp GGTTCTTCTCAGAGATTGTTCTTAGAGACCCCCAAACCTGCAGCCCAAGCCCAGATTCCTCTCCAAAACTaGGTTTCCTCTGATACAAAA +
Preference number: 4 (lower is better)
Translates to: GSSQRLFLETPKPAAQAQIPLQN*VSSDTK
Trigger: TTTTGTATCAGAGGAAACTCAGTTTTGGAGAGGAAT...CTGGGCTTGGGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR TCA 90 bp GAGGGGAAAGACTTGGTTAATTTCTCTTATCAAAAGCTAGTCTTCAGGACATCCACAAACTGGTGGCCATaGGGTCTGGGACCACACACA +
Preference number: 4 (lower is better)
Translates to: EGKDLVNFSYQKLVFRTSTNWWP*GLGPHT
Trigger: TGTGTGTGGTCCCAGACCTCATGGCCACCAGTTTGT...GGATGTCCTGAAGACTAGCTTTTGATAAGAGAAATTAACCAAGTCTTTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CTCCCTAAACCCTTGATTCCTCTGCTCACAATGGCCAGGGGTCAAGAGTCAGCCATGATAAGCATTTCCTaGTGTACAATCCCATATACT +
Preference number: 4 (lower is better)
Translates to: LPKPLIPLLTMARGQESAMISIS*CTIPYT
Trigger: AGTATATGGGATTGTACAGCAGGAAATGCTTATCAT...GGCTGACTCTTGACCCCTGGCCATTGTGAGCAGAGGAATCAAGGGTTTAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp TGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCAAAAAGCATTCACAATaGTTAAACAAACTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CLLEKIWFAPSNRCALKAKKHSQ*LNKLVA
Trigger: GGCCACCAGTTTGTTTAAGCATTGTGAATGCTTTTT...GGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp GAGGGGAAAGACTTGGTTAATTTCTCTTATCAAAAGCTAGTCTTCAGGACATCCCTGCCGTCTAATGGATaGCCAGTACCTACCCACTGG +
Preference number: 4 (lower is better)
Translates to: EGKDLVNFSYQKLVFRTSLPSNG*PVPTHW
Trigger: CCAGTGGGTAGGTACTGGGCATCCATTAGACGGCAG...GGATGTCCTGAAGACTAGCTTTTGATAAGAGAAATTAACCAAGTCTTTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp TTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCGTTAAGATTCCCCAATaGTTTATGCTTCTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LPSGEDMVCTVQQVCSEGVKIPQ*FMLLAF
Trigger: GAAAGCCAGAAGCATAAACCATTGGGGAATCTTAAC...GCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp CTCCATCTTGCAAGACTCCCAGACTCTAGTTCTTTGACAAACAGGAAGGCAGAGCACAGGAGGTCTGTATaGCATCTGTGGTTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LHLARLPDSSSLTNRKAEHRRSV*HLWFCS
Trigger: AGAACAAAACCACAGATGCCATACAGACCTCCTGTG...CTCTGCCTTCCTGTTTGTCAAAGAACTAGAGTCTGGGAGTCTTGCAAGATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp ATGCTGAGATGGCAGAAGTGCTGTATCATTAAAGGTGATTCAGCACTTCACAGCCTGTTCTGTTCAACGTaGCACTGGCTCCCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: MLRWQKCCIIKGDSALHSLFCST*HWLPSL
Trigger: AAGACTAGGGAGCCAGTGCCACGTTGAACAGAACAG...GCTGTGAAGTGCTGAATCACCTTTAATGATACAGCACTTCTGCCATCTCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp TCCTCTGATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCATTTGGCTGGCAGGGTTaGGGGCACTTAGTATGGGTT +
Preference number: 4 (lower is better)
Translates to: SSDTKVFAFWRRYGLHRPFGWQG*GHLVWV
Trigger: AACCCATACTAAGTGCCCCCAACCCTGCCAGCCAAA...TGGACGGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTATCAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CAA 72 bp AGCCTCGGGGGCATGTTTTTCAGAGCAGGCGAAATTTaGGACACATGCGGAACATCTTATGGTGTAAACAGA +
Preference number: 4 (lower is better)
Translates to: SLGGMFFRAGEI*DTCGTSYGVNR
Trigger: TCTGTTTACACCATAAGATGTTCCGCATGTGTCCAAAATTTCGCCTGCTCTGAAAAACATGCCCCCGAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CTTCCTCAGCAGAGTAAGGGACTCTTTAATTTTATCAACCAGGTCCTCATTCTTCATTTCAGCCAAGCCTaGCCACTTCTTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPQQSKGLFNFINQVLILHFSQA*PLLPQQ
Trigger: CTGCTGAGGAAGAAGTGGGCAGGCTTGGCTGAAATG...AAGAATGAGGACCTGGTTGATAAAATTAAAGAGTCCCTTACTCTGCTGAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR GCA 90 bp GAGGGGAAAGACTTGGTTAATTTCTCTTATCAAAAGCTAGTCTTCAGGACATCCCCAGGAGGCAAAAGTTaGAGTGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: EGKDLVNFSYQKLVFRTSPGGKS*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAACTTTTGCCTCCTGG...GGATGTCCTGAAGACTAGCTTTTGATAAGAGAAATTAACCAAGTCTTTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp TTCACTAAACCACTGTTCTGTTCAACGTGGCACTGGCTCCCTAGTCTTCCCATCATTACTGTGGATTGCTaGAGTTCTTATAAGGGGTAC +
Preference number: 4 (lower is better)
Translates to: FTKPLFCSTWHWLPSLPIITVDC*SSYKGY
Trigger: GTACCCCTTATAAGAACTGCAGCAATCCACAGTAAT...GATGGGAAGACTAGGGAGCCAGTGCCACGTTGAACAGAACAGTGGTTTAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp CTGAAAAAGTGTATCAATCCAAATGAATGGGCCACTGGAGGAGGAAAGTGGTTTGTAATCTCAGCACTTTaGGAGGCCAAAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LKKCINPNEWATGGGKWFVISAL*EAKAGG
Trigger: TCCACCTGCTTTGGCCTCCCAAAGTGCTGAGATTAC...AAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACTTTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp AGTTCAGAATTAAGCTCAAGTACTTCTGCTTACTGGGAGAACTGCCAAGTCCACAGTACTTCTGCTTACTaGGAGAACTGCCAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SSELSSSTSAYWENCQVHSTSAY*ENCQVH
Trigger: GTGGACTTGGCAGTTCTCCCAGTAAGCAGAAGTACT...GTGGACTTGGCAGTTCTCCCAGTAAGCAGAAGTACTTGAGCTTAATTCTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp TTCACTAAACCACTGTTCTGTTCAACGTGGCACTGGCTCCCTAGTCTTCCCATCATTCCTCTCCAAAACTaGGTTTCCTCTGATACAAAA +
Preference number: 4 (lower is better)
Translates to: FTKPLFCSTWHWLPSLPIIPLQN*VSSDTK
Trigger: TTTTGTATCAGAGGAAACTCAGTTTTGGAGAGGAAT...GATGGGAAGACTAGGGAGCCAGTGCCACGTTGAACAGAACAGTGGTTTAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp TCCTCTGATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCACTTTGGTTCCTCCTCTaGAAGCAGGTGGATACAAAC +
Preference number: 4 (lower is better)
Translates to: SSDTKVFAFWRRYGLHRPLWFLL*KQVDTN
Trigger: GTTTGTATCCACCTGCTTTCAGAGGAGGAACCAAAG...TGGACGGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTATCAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp ATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCCCACTGAAATATATAAGATTCTGGGCAACTaGAGCTGCATATTGCAATTA +
Preference number: 4 (lower is better)
Translates to: IWFAPSNRCALKAPTEIYKILGN*SCILQL
Trigger: TAATTGCAATATGCAGCTTCAGTTGCCCAGAATCTT...ATATATTTCAGTGGGGGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CATTTCAGCCAAGCCTGCCCACTTCTTCCTCAGCAGAGTAAGGGACTCTTTAATACAAGCTATCTGTCTTaGTTCAGCAGTTCTCATTTC +
Preference number: 4 (lower is better)
Translates to: HFSQACPLLPQQSKGLFNTSYLS*FSSSHF
Trigger: GAAATGAGAACTGCTGAAGCAAGACAGATAGCTTGT...ATTAAAGAGTCCCTTACTCTGCTGAGGAAGAAGTGGGCAGGCTTGGCTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR CCA 90 bp CCTCTGATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAAGTTTGTTGTTCACAGTaGGGAGGTCTTTCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: PLIQKYLPSGEDMVCTVQVCCSQ*GGLSAA
Trigger: TGCAGCAGAAAGACCTCCCCACTGTGAACAACAAAC...TTGGACGGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTATCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp TCCGCCTCATTTGTGAATAGTTCATCACAAGCTATCTGTCTTGCTTCAGCAGTTCCTCCGCCTCATTTGTaGATAGTTCATCACAAGCTA +
Preference number: 4 (lower is better)
Translates to: SASFVNSSSQAICLASAVPPPHL*IVHHKL
Trigger: TAGCTTGTGATGAACTATTCACAAATGAGGCGGAGG...AACTGCTGAAGCAAGACAGATAGCTTGTGATGAACTATTCACAAATGAGGCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR TCA 90 bp TTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTGCTTGATCCAGTTGTATTTGCTGTCCTGGGTCATTTaGTGTGTCCCGAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: FFPSNFSPSFHCLIQLYLLSWVI*CVPSKQ
Trigger: CTGTTTGCTCGGGACACATCAAATGACCCAGGACAG...CAAATACAACTGGATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503023.1
CDS-3UTR TCA 90 bp ATGCTGAGATGGCAGAAGTGCTGTATCATTAAAGGTGATTCAGCACTTCACAGCGTAAGGAGGGGAATCTaGAAATGTTCTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: MLRWQKCCIIKGDSALHSVRRGI*KCSGKA
Trigger: TGCTTTTCCAGAACATTTTCAGATTCCCCTCCTTAC...GCTGTGAAGTGCTGAATCACCTTTAATGATACAGCACTTCTGCCATCTCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp CATTTCAGCCAAGCCTGCCCACTTCTTCCTCAGCAGAGTAAGGGACTCTTTAATAGTCCAAGTTTCCATTaGTTGATCCAGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: HFSQACPLLPQQSKGLFNSPSFH*LIQLYL
Trigger: CAAATACAACTGGATCAAGCAATGGAAACTTGGACT...ATTAAAGAGTCCCTTACTCTGCTGAGGAAGAAGTGGGCAGGCTTGGCTGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR GCA 90 bp TTTTATCAACCAGGTCCTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTCATTTCAGCCAAGCCTaGCCACTTCTTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FYQPGPHSSHQISVQVSIHFSQA*PLLPQQ
Trigger: CTGCTGAGGAAGAAGTGGGCAGGCTTGGCTGAAATG...AATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAGGACCTGGTTGATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR GCA 90 bp AGTGTATCAATCCAAATGAATGGGCCACTGGAGGAGGAAAGTGGTTTGTTGTTCATGCACATAAAGGTATaGTGTGACTGCAGACCAACA +
Preference number: 4 (lower is better)
Translates to: SVSIQMNGPLEEESGLLFMHIKV*CDCRPT
Trigger: TGTTGGTCTGCAGTCACAGCATACCTTTATGTGCAT...GAACAACAAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CCA 90 bp GAGGGGAAAGACTTGGTTAATTTCTCTTATCAAAAGCTAGTCTTCAGGACATCCCTCCACTTTCTTGAGTaGGAAAAGGCGGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: EGKDLVNFSYQKLVFRTSLHFLE*EKAVEK
Trigger: CTTTTCCACCGCCTTTTCCCACTCAAGAAAGTGGAG...GGATGTCCTGAAGACTAGCTTTTGATAAGAGAAATTAACCAAGTCTTTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp ATGCTGAGATGGCAGAAGTGCTGTATCATTAAAGGTGATTCAGCACTTCACAGCACTCATATTCCCGTATaGTTCCGCTTAAATGTACTC +
Preference number: 4 (lower is better)
Translates to: MLRWQKCCIIKGDSALHSTHIPV*FRLNVL
Trigger: GAGTACATTTAAGCGGAAGCATACGGGAATATGAGT...GCTGTGAAGTGCTGAATCACCTTTAATGATACAGCACTTCTGCCATCTCAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp GAGGGGAAAGACTTGGTTAATTTCTCTTATCAAAAGCTAGTCTTCAGGACATCCTTCCCCAATGGTTTATaGTTCTGGCTTTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: EGKDLVNFSYQKLVFRTSFPNGL*FWLSKG
Trigger: CCCCTTTGAAAGCCAGAAGCATAAACCATTGGGGAA...GGATGTCCTGAAGACTAGCTTTTGATAAGAGAAATTAACCAAGTCTTTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp AGTGTATCAATCCAAATGAATGGGCCACTGGAGGAGGAAAGTGGTTTGTTGTTCTCTTGTTCTCTAATGTaGCTATCATTGTTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SVSIQMNGPLEEESGLLFSCSLM*LSLFLV
Trigger: CACAAGGAACAATGATAGTCACATTAGAGAACAAGA...GAACAACAAACCACTTTCCTCCTCCAGTGGCCCATTCATTTGGATTGATACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp ACCAGGTCCTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTGCTTGATCACAAGCTATCTGTCTTaGTTCAGCAGTTCTCATTTC +
Preference number: 4 (lower is better)
Translates to: TRSSFFPSNFSPSFHCLITSYLS*FSSSHF
Trigger: GAAATGAGAACTGCTGAAGCAAGACAGATAGCTTGT...GATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAGGACCTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR TCA 90 bp CTTCTTCCTCAGCAGAGTAAGGGACTCTTTAATTTTATCAACCAGGTCCTCATTTTTTGCAGTAGTCCATaGTATCCATTTCAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: LLPQQSKGLFNFINQVLIFCSSP*YPFQEL
Trigger: TAGCTCCTGAAATGGATATCATGGACTACTGCAAAA...AATGAGGACCTGGTTGATAAAATTAAAGAGTCCCTTACTCTGCTGAGGAAGAAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR CAA 72 bp AGAAAAACACCATCGCCACTGGCAGAGGGTCTAAAGTaGGCTTGTTATCCTCTCCAAATTCATAATACAAAA +
Preference number: 4 (lower is better)
Translates to: RKTPSPLAEGLK*ACYPLQIHNTK
Trigger: TTTTGTATTATGAATTTGGAGAGGATAACAAGCCAACTTTAGACCCTCTGCCAGTGGCGATGGTGTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR TCA 90 bp ATATTCCTCTCCAAAACTGAGTTTCCTCTGATACAAAAGTATTTGCCTTCTGGATCTGAAGGCCCCCACTaGAATATATTGCATCATAGA +
Preference number: 4 (lower is better)
Translates to: IFLSKTEFPLIQKYLPSGSEGPH*NILHHR
Trigger: TCTATGATGCAATATATTTCAGTGGGGGCCTTCAGA...TCCAGAAGGCAAATACTTTTGTATCAGAGGAAACTCAGTTTTGGAGAGGAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR TCA 90 bp GATGAGGGGAAAGACTTGGTTAATTTCTCTTATCAAAAGCTAGTCTTCAGGACAACAGAGCCAGGCTTCTaGGTTGTATTTTCTAAGTTT +
Preference number: 4 (lower is better)
Translates to: DEGKDLVNFSYQKLVFRTTEPGF*VVFSKF
Trigger: AAACTTAGAAAATACAACTCAGAAGCCTGGCTCTGT...TGTCCTGAAGACTAGCTTTTGATAAGAGAAATTAACCAAGTCTTTCCCCTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR GCA 90 bp TATCAACCAGGTCCTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTGCTAGTCCAAGTTTCCATTaGTTGATCCAGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: YQPGPHSSHQISVQVSIASPSFH*LIQLYL
Trigger: CAAATACAACTGGATCAAGCAATGGAAACTTGGACT...AGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAGGACCTGGTTGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR CCA 90 bp GAGTTTCCTCTGATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTGCACCAAAGTATTTGCCTTCTaGAGAAGATATGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: EFPLIQKYLPSGEDMVCTKVFAF*RRYGLH
Trigger: GTGCAAACCATATCTTCTCCAGAAGGCAAATACTTT...GGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTATCAGAGGAAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CCA 90 bp CCTCTGATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAATTCCAGCAGTGTAAATaGTTCATAAAGAAATGTCTC +
Preference number: 4 (lower is better)
Translates to: PLIQKYLPSGEDMVCTVQFQQCK*FIKKCL
Trigger: GAGACATTTCTTTATGAACCATTTACACTGCTGGAA...TTGGACGGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTATCAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
3UTR CAA 72 bp TCAAATTTCAGTCCAAGTTTCCATTGCTTGATCCAGTaGTATTTGCTTATGAGTTTTTCTGGTAACAGCATG +
Preference number: 4 (lower is better)
Translates to: SNFSPSFHCLIQ*YLLMSFSGNSM
Trigger: CATGCTGTTACCAGAAAAACTCATAAGCAAATACAACTGGATCAAGCAATGGAAACTTGGACTGAAATTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR CAA 72 bp TTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTGCTaGATCCAGTTGTATTTGCTTATGAGTTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: FFPSNFSPSFHC*IQLYLLMSFSG
Trigger: ACCAGAAAAACTCATAAGCAAATACAACTGGATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503023.1
3UTR CAA 72 bp CTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATaGCTTGATCCAGTTGTATTTGCTTATGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LILPIKFQSKFP*LDPVVFAYEFF
Trigger: GAAAAACTCATAAGCAAATACAACTGGATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503023.1
CDS GCA 90 bp ATGTCCTCCTCATGCTCGGCCGGGCACTGCATCTCGGGCCGCGGCTaGCCGCTGGCCGCCGCCTTCCCGCCGTCCCGCGCCGTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: MSSSCSAGHCISGRG*PLAAAFPPSRAVAA
Trigger: GGCGGCCACGGCGCGGGACGGCGGGAAGGCGGCGGCCAGCGGGCAGCCGCGGCCCGAGATGCAGTGCCCGGCCGAGCATGAGGAGGACAT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000507335.1
CDS GCA 90 bp TTAATCTCGGTTTGCTCGGCCGGGCACTGCATCTCGGGCCGCGGCTaGCCGCTGGCCGCCGCCTTCCCGCCGTCCCGCGCCGTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: LISVCSAGHCISGRG*PLAAAFPPSRAVAA
Trigger: GGCGGCCACGGCGCGGGACGGCGGGAAGGCGGCGGCCAGCGGGCAGCCGCGGCCCGAGATGCAGTGCCCGGCCGAGCAAACCGAGATTAA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503023.1
CDS CCA 90 bp CGCGCCGGCGTCTCGGCGCAGCTCGCGCCTGGCCACGCTTCGGGCTaGGGCATAGTCCCCCGACTCATGCGGTCGCTCGCGGCCGAAGGG +
Preference number: 5 (lower is better)
Translates to: RAGVSAQLAPGHASG*GIVPRLMRSLAAEG
Trigger: CCCTTCGGCCGCGAGCGACCGCATGAGTCGGGGGACTATGCCCCAGCCCGAAGCGTGGCCAGGCGCGAGCTGCGCCGAGACGCCGGCGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284274.5
ENST00000503023.1
ENST00000507335.1
CDS GCA 90 bp GAGCCACCTGTGCATCTTCGCCACGTCGCCAGGCTGTCAGGAGCATaGGTCTCTCATAGACTGGTCTCCTCACACACTCTGACGGGGATG +
Preference number: 5 (lower is better)
Translates to: EPPVHLRHVARLSGA*VSHRLVSSHTLTGM
Trigger: CATCCCCGTCAGAGTGTGTGAGGAGACCAGTCTATGAGAGACGCATGCTCCTGACAGCCTGGCGACGTGGCGAAGATGCACAGGTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CAA 90 bp CAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGCTGTCAGATGAATTCTTCCGTGTaGTACTTGGAGAGCCGGTAC +
Preference number: 5 (lower is better)
Translates to: QPKPRSHLCIFATSPGCQMNSSV*YLESRY
Trigger: GTACCGGCTCTCCAAGTACAACACGGAAGAATTCAT...CTGACAGCCTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CAA 90 bp TCATCCCCTGACCCAGACGGGTTACACAGATCTGGCAGTGGACACACCCTCCAAGGCTGCAGCCCTGCTTaGCAGGTCTGGAGGATCTTC +
Preference number: 5 (lower is better)
Translates to: SSPDPDGLHRSGSGHTLQGCSPA*QVWRIF
Trigger: GAAGATCCTCCAGACCTGCAAAGCAGGGCTGCAGCC...TTGGAGGGTGTGTCCACTGCCAGATCTGTGTAACCCGTCTGGGTCAGGGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp CAAACCTGCAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGATGAATTCTTCCGTGTaGTACTTGGAGAGCCGGTAC +
Preference number: 5 (lower is better)
Translates to: QTCSPSPGATCASSPRRQMNSSV*YLESRY
Trigger: GTACCGGCTCTCCAAGTACAACACGGAAGAATTCAT...CTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTGCAGGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS CCA 90 bp GGGGATGTTATAGTGCCGATCGTCCTCAGCAATGAGCGTTACCACTaGCCAGTCCTTGGGTGGGTCGGTGGGGTAGACTGTGATGAATTC +
Preference number: 5 (lower is better)
Translates to: GDVIVPIVLSNERYH*PVLGWVGGVDCDEF
Trigger: GAATTCATCACAGTCTACCCCACCGACCCACCCAAGGACTGGCCAGTGGTAACGCTCATTGCTGAGGACGATCGGCACTATAACATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CAA 90 bp CTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCGCTGTCCTGGGTCATTaGATGTGTCCCGAGCAAACA +
Preference number: 5 (lower is better)
Translates to: LVFRTSCPTWLPGAQGFFAVLGH*MCPEQT
Trigger: TGTTTGCTCGGGACACATCAAATGACCCAGGACAGC...GAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp GGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTCTTAGAGACCCCCAAATCTTCCGTGTTGTACTaGGAGAGCCGGTACACCTGG +
Preference number: 5 (lower is better)
Translates to: GSQGPKGSSQRLFLETPKSSVLY*ESRYTW
Trigger: CCAGGTGTACCGGCTCTCCAAGTACAACACGGAAGA...TTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CAA 90 bp CAAACCTGCAGCCCAAGCCCAGGAGCCACCTGTGCATCTTCGCCACGTCGCCAGGTACTGATCGATGTTTaGGCAGTTTCATTTCTGACC +
Preference number: 5 (lower is better)
Translates to: QTCSPSPGATCASSPRRQVLIDV*AVSFLT
Trigger: GGTCAGAAATGAAACTGCCAAAACATCGATCAGTAC...CTGGCGACGTGGCGAAGATGCACAGGTGGCTCCTGGGCTTGGGCTGCAGGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS CCA 90 bp CCGATCGTCCTCAGCAATGAGCGTTACCACTGGCCAGTCCTTGGGTaGGTCGGTGGGGTAGACTGTGATGAATTCTTCCGTGTTGTACTT +
Preference number: 5 (lower is better)
Translates to: PIVLSNERYHWPVLG*VGGVDCDEFFRVVL
Trigger: AAGTACAACACGGAAGAATTCATCACAGTCTACCCCACCGACCCACCCAAGGACTGGCCAGTGGTAACGCTCATTGCTGAGGACGATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CAA 90 bp GGTTCTTCTCAGAGATTGTTCTTAGAGACCCCCAAACCTGCAGCCCAAGCCCAGTCTTCCGTGTTGTACTaGGAGAGCCGGTACACCTGG +
Preference number: 5 (lower is better)
Translates to: GSSQRLFLETPKPAAQAQSSVLY*ESRYTW
Trigger: CCAGGTGTACCGGCTCTCCAAGTACAACACGGAAGA...CTGGGCTTGGGCTGCAGGTTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CAA 90 bp GAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCCCACTGAAGAGGAGGAAAGTGGTTaGTTGTTCACAGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: EKIWFAPSNRCALKAPTEEEESG*LFTVGR
Trigger: CCTCCCCACTGTGAACAACAAACCACTTTCCTCCTC...TTCAGTGGGGGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS TCA 90 bp GGAACATTTCAACCTGTTCAAGACCACCAGTGTGTCCCACCTGGTTaGGGTGGTTCCTCAGAAGCTGTCCTGGGTCATTTGATGTGTCCC +
Preference number: 5 (lower is better)
Translates to: GTFQPVQDHQCVPPG*GGSSEAVLGHLMCP
Trigger: GGGACACATCAAATGACCCAGGACAGCTTCTGAGGAACCACCTCAACCAGGTGGGACACACTGGTGGTCTTGAACAGGTTGAAATGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS CCA 90 bp ATTTCAACCTGTTCAAGACCACCAGTGTGTCCCACCTGGTTGAGGTaGTTCCTCAGAAGCTGTCCTGGGTCATTTGATGTGTCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: ISTCSRPPVCPTWLR*FLRSCPGSFDVSRA
Trigger: TGCTCGGGACACATCAAATGACCCAGGACAGCTTCTGAGGAACCACCTCAACCAGGTGGGACACACTGGTGGTCTTGAACAGGTTGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp GACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTCCAGACTCTAGTTCTTaGACAAACAGGAAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: DILSNLAPRGPRVLLRDCPDSSS*TNRKAE
Trigger: CTCTGCCTTCCTGTTTGTCAAAGAACTAGAGTCTGG...ACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp CCTTCTGGAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCCGGTTCTTCTCAGAGATaGTTCTTAGAGACCCCCAAA +
Preference number: 5 (lower is better)
Translates to: PSGEDMVCTVQQVCSEGPGSSQR*FLETPK
Trigger: TTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACC...GGGGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CAA 90 bp TTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCTGGAGAAGATATGGTTaGCACCGTCCAACAGGTGTG +
Preference number: 5 (lower is better)
Translates to: LPSGEDMVCTVQQVCSEGWRRYG*HRPTGV
Trigger: CACACCTGTTGGACGGTGCAAACCATATCTTCTCCA...GCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTCCAGAAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CAA 90 bp AAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCGGGTCTAAAGTTGGCTaGTTATCCTCTCCAAATTCA +
Preference number: 5 (lower is better)
Translates to: KLVFRTSCPTWLPGAQGFGSKVG*LSSPNS
Trigger: TGAATTTGGAGAGGATAACAAGCCAACTTTAGACCC...GAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp ACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTGCAGAGGGTCTAAAGTaGGCTTGTTATCCTCTCCAA +
Preference number: 5 (lower is better)
Translates to: TSCPTWLPGAQGFFSEIVAEGLK*ACYPLQ
Trigger: TTGGAGAGGATAACAAGCCAACTTTAGACCCTCTGC...AACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp GAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCCCACTGAAAGAGCAGGCGAAATTTaGGACACATGCGGAACATCT +
Preference number: 5 (lower is better)
Translates to: EKIWFAPSNRCALKAPTERAGEI*DTCGTS
Trigger: AGATGTTCCGCATGTGTCCAAAATTTCGCCTGCTCT...TTCAGTGGGGGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS TCA 90 bp TCCCACCTGGTTGAGGTGGTTCCTCAGAAGCTGTCCTGGGTCATTTaGTGTGTCCCGAGCAAACAGAAGCACAGAGAAAAATGGTACTTC +
Preference number: 5 (lower is better)
Translates to: SHLVEVVPQKLSWVI*CVPSKQKHREKWYF
Trigger: GAAGTACCATTTTTCTCTGTGCTTCTGTTTGCTCGGGACACATCAAATGACCCAGGACAGCTTCTGAGGAACCACCTCAACCAGGTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS CCA 90 bp AGAAGGAACATTTCAACCTGTTCAAGACCACCAGTGTGTCCCACCTaGTTGAGGTGGTTCCTCAGAAGCTGTCCTGGGTCATTTGATGTG +
Preference number: 5 (lower is better)
Translates to: RRNISTCSRPPVCPT*LRWFLRSCPGSFDV
Trigger: CACATCAAATGACCCAGGACAGCTTCTGAGGAACCACCTCAACCAGGTGGGACACACTGGTGGTCTTGAACAGGTTGAAATGTTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp CTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCCAGTCCAAGTTTCCATaGCTTGATCCAGTTGTATTT +
Preference number: 5 (lower is better)
Translates to: LVFRTSCPTWLPGAQGFFQSKFP*LDPVVF
Trigger: AAATACAACTGGATCAAGCAATGGAAACTTGGACTG...GAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp ACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTGGTTCTTCTCAGAGATaGTTCTTAGAGACCCCCAAA +
Preference number: 5 (lower is better)
Translates to: TSCPTWLPGAQGFFSEIVGSSQR*FLETPK
Trigger: TTTGGGGGTCTCTAAGAACAATCTCTGAGAAGAACC...AACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CAA 90 bp TACCACTTAAAGCAGACTGTTAGAAGCCCCCTCAGTGCAGTGGGCAGCACGTCACTACCTCAAAGTAATTaGGCCTTTGGTTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: YHLKQTVRSPLSAVGSTSLPQSN*AFGSSS
Trigger: AGAGGAGGAACCAAAGGCCAAATTACTTTGAGGTAG...TGACGTGCTGCCCACTGCACTGAGGGGGCTTCTAACAGTCTGCTTTAAGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp CTCCATCTTGCAAGACTCCCAGACTCTAGTTCTTTGACAAACAGGAAGGCAGAGTGCAGTCCACACCCCTaGAGGACAATTCAGGCCATA +
Preference number: 5 (lower is better)
Translates to: LHLARLPDSSSLTNRKAECSPHP*RTIQAI
Trigger: TATGGCCTGAATTGTCCTCAAGGGGTGTGGACTGCA...CTCTGCCTTCCTGTTTGTCAAAGAACTAGAGTCTGGGAGTCTTGCAAGATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp TCAAAAGCTAGTCTTCAGGACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGCCAAGTTTCCATTGCTaGATCCAGTTGTATTTGCTT +
Preference number: 5 (lower is better)
Translates to: SKASLQDILSNLAPRGPRPSFHC*IQLYLL
Trigger: AAGCAAATACAACTGGATCAAGCAATGGAAACTTGG...CCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGTCCTGAAGACTAGCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp CCGTCCAACAGGTGTGCTCTGAAGGCCCCCACTGAAATATATTGCATCATAGATTGGAGAAGATATGGTTaGCACCGTCCAACAGGTGTG +
Preference number: 5 (lower is better)
Translates to: PSNRCALKAPTEIYCIIDWRRYG*HRPTGV
Trigger: CACACCTGTTGGACGGTGCAAACCATATCTTCTCCA...ATCTATGATGCAATATATTTCAGTGGGGGCCTTCAGAGCACACCTGTTGGACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CAA 90 bp ATGCTGAGATGGCAGAAGTGCTGTATCATTAAAGGTGATTCAGCACTTCACAGCATTTGGCTGGCAGGGTaGGGGGCACTTAGTATGGGT +
Preference number: 5 (lower is better)
Translates to: MLRWQKCCIIKGDSALHSIWLAG*GALSMG
Trigger: ACCCATACTAAGTGCCCCCAACCCTGCCAGCCAAAT...GCTGTGAAGTGCTGAATCACCTTTAATGATACAGCACTTCTGCCATCTCAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp CCTCAGCAGAGTAAGGGACTCTTTAATTTTATCAACCAGGTCCTCATTCTTCCCGCTGTCCTGGGTCATTaGATGTGTCCCGAGCAAACA +
Preference number: 5 (lower is better)
Translates to: PQQSKGLFNFINQVLILPAVLGH*MCPEQT
Trigger: TGTTTGCTCGGGACACATCAAATGACCCAGGACAGC...GGGAAGAATGAGGACCTGGTTGATAAAATTAAAGAGTCCCTTACTCTGCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503023.1
CDS-3UTR CAA 90 bp GAGGGGAAAGACTTGGTTAATTTCTCTTATCAAAAGCTAGTCTTCAGGACATCCGTGTGTCCCACCTGGTaGAGGTGGTTCCTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: EGKDLVNFSYQKLVFRTSVCPTW*RWFLRS
Trigger: GCTTCTGAGGAACCACCTCAACCAGGTGGGACACAC...GGATGTCCTGAAGACTAGCTTTTGATAAGAGAAATTAACCAAGTCTTTCCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp TCCTCTGATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAAACTATGCACCTAATTaGGCTGGCAGGGTTGGGGGC +
Preference number: 5 (lower is better)
Translates to: SSDTKVFAFWRRYGLHRPNYAPN*AGRVGG
Trigger: GCCCCCAACCCTGCCAGCCAAATTAGGTGCATAGTT...TGGACGGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTATCAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp TTCCTCAGCAGAGTAAGGGACTCTTTAATTTTATCAACCAGGTCCTCATTCTTCACGCTTAATCTCGGTTaGCTCGGCCGGGCACTGCAT +
Preference number: 5 (lower is better)
Translates to: FLSRVRDSLILSTRSSFFTLNLG*LGRALH
Trigger: ATGCAGTGCCCGGCCGAGCAAACCGAGATTAAGCGT...GAAGAATGAGGACCTGGTTGATAAAATTAAAGAGTCCCTTACTCTGCTGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503023.1
CDS-3UTR CAA 90 bp CTTGCTTCAGCAGTTCTCATTTCAGCCAAGCCTGCCCACTTCTTCCTCAGCAGACAGTCCAAGTTTCCATaGCTTGATCCAGTTGTATTT +
Preference number: 5 (lower is better)
Translates to: LASAVLISAKPAHFFLSRQSKFP*LDPVVF
Trigger: AAATACAACTGGATCAAGCAATGGAAACTTGGACTG...TCTGCTGAGGAAGAAGTGGGCAGGCTTGGCTGAAATGAGAACTGCTGAAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR CAA 90 bp GTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTCTTAGAGGATGAGGGGAAAGACTaGGTTAATTTCTCTTATCAA +
Preference number: 5 (lower is better)
Translates to: VQLGSQGPKGSSQRLFLEDEGKD*VNFSYQ
Trigger: TTGATAAGAGAAATTAACCAAGTCTTTCCCCTCATC...CTCTAAGAACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CAA 90 bp GAGAAGATATGGTTTGCACCGTCCAACAGGTGTGCTCTGAAGGCCCCCACTGAACTGATACAAAAGTATTaGCCTTCTGGAGAAGATATG +
Preference number: 5 (lower is better)
Translates to: EKIWFAPSNRCALKAPTELIQKY*PSGEDM
Trigger: CATATCTTCTCCAGAAGGCAAATACTTTTGTATCAG...TTCAGTGGGGGCCTTCAGAGCACACCTGTTGGACGGTGCAAACCATATCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS-3UTR CAA 90 bp TACCACTTAAAGCAGACTGTTAGAAGCCCCCTCAGTGCAGTGGGCAGCACGTCACCATTTTTAAATTACTaGATATTGCGCCCTGCCTTT +
Preference number: 5 (lower is better)
Translates to: YHLKQTVRSPLSAVGSTSPFLNY*ILRPAF
Trigger: AAAGGCAGGGCGCAATATCAAGTAATTTAAAAATGG...TGACGTGCTGCCCACTGCACTGAGGGGGCTTCTAACAGTCTGCTTTAAGTGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp ACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTATGGCATCTGTGGTTTaGTTCTTGAATGGCATTTTA +
Preference number: 5 (lower is better)
Translates to: TSCPTWLPGAQGFFSEIVMASVV*FLNGIL
Trigger: TAAAATGCCATTCAAGAACAAAACCACAGATGCCAT...AACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp ACATCCTGTCCAACTTGGCTCCCAGGGGCCCAAGGGTTCTTCTCAGAGATTGTTAACATTAATAATCAGTaGCCCATGTCTTTCCTCACA +
Preference number: 5 (lower is better)
Translates to: TSCPTWLPGAQGFFSEIVNINNQ*PMSFLT
Trigger: TGTGAGGAAAGACATGGGCAACTGATTATTAATGTT...AACAATCTCTGAGAAGAACCCTTGGGCCCCTGGGAGCCAAGTTGGACAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp GTTAAGCACTGTGCTAACTGCTTCATCTCATCTAACTCTTCCACACTGCCCAATGAGGAAAGTGGTTTGTaGTTCACAGTGGGGAGGTCT +
Preference number: 5 (lower is better)
Translates to: VKHCANCFISSNSSTLPNEESGL*FTVGRS
Trigger: AGACCTCCCCACTGTGAACAACAAACCACTTTCCTC...ATTGGGCAGTGTGGAAGAGTTAGATGAGATGAAGCAGTTAGCACAGTGCTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp TTCACTAAACCACTGTTCTGTTCAACGTGGCACTGGCTCCCTAGTCTTCCCATCCCATTTTCATACACGTaGCTTTCTGTGTATTTCCTC +
Preference number: 5 (lower is better)
Translates to: FTKPLFCSTWHWLPSLPIPFSYT*LSVYFL
Trigger: GAGGAAATACACAGAAAGCAACGTGTATGAAAATGG...GATGGGAAGACTAGGGAGCCAGTGCCACGTTGAACAGAACAGTGGTTTAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp TCACAAGCTATCTGTCTTGCTTCAGCAGTTCTCATTTCAGCCAAGCCTGCCCACCCAAGTTTCCATTGCTaGATCCAGTTGTATTTGCTT +
Preference number: 5 (lower is better)
Translates to: SQAICLASAVLISAKPAHPSFHC*IQLYLL
Trigger: AAGCAAATACAACTGGATCAAGCAATGGAAACTTGG...GTGGGCAGGCTTGGCTGAAATGAGAACTGCTGAAGCAAGACAGATAGCTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR CAA 90 bp AAGCTATCTGTCTTGCTTCAGCAGTTCTCATTTCAGCCAAGCCTGCCCACTTCTCACAAGCTATCTGTCTaGCTTCAGCAGTTCTCATTT +
Preference number: 5 (lower is better)
Translates to: KLSVLLQQFSFQPSLPTSHKLSV*LQQFSF
Trigger: AAATGAGAACTGCTGAAGCAAGACAGATAGCTTGTG...AGAAGTGGGCAGGCTTGGCTGAAATGAGAACTGCTGAAGCAAGACAGATAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR CAA 90 bp GAGGGGAAAGACTTGGTTAATTTCTCTTATCAAAAGCTAGTCTTCAGGACATCCTGTAATCTCAGCACTTaGGGAGGCCAAAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: EGKDLVNFSYQKLVFRTSCNLST*GGQSRW
Trigger: CCACCTGCTTTGGCCTCCCAAAGTGCTGAGATTACA...GGATGTCCTGAAGACTAGCTTTTGATAAGAGAAATTAACCAAGTCTTTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp CCTCTGATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTGCACCGTCCAATGCCTCCCTAAACCCTaGATTCCTCTGCTCACAATG +
Preference number: 5 (lower is better)
Translates to: PLIQKYLPSGEDMVCTVQCLPKP*IPLLTM
Trigger: CATTGTGAGCAGAGGAATCAAGGGTTTAGGGAGGCA...TTGGACGGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTATCAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp ATCAACAGATGTATATACAGAAGGAGCTCAGGATGTAAGGAGGGGAATCTGAAAACACACCAAACCTCTTaGCGGCAAACACACAGCAGG +
Preference number: 5 (lower is better)
Translates to: INRCIYRRSSGCKEGNLKTHQTS*RQTHSR
Trigger: CCTGCTGTGTGTTTGCCGCAAAGAGGTTTGGTGTGT...TTTCAGATTCCCCTCCTTACATCCTGAGCTCCTTCTGTATATACATCTGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp TTCACTAAACCACTGTTCTGTTCAACGTGGCACTGGCTCCCTAGTCTTCCCATCGATGAGGGGAAAGACTaGGTTAATTTCTCTTATCAA +
Preference number: 5 (lower is better)
Translates to: FTKPLFCSTWHWLPSLPIDEGKD*VNFSYQ
Trigger: TTGATAAGAGAAATTAACCAAGTCTTTCCCCTCATC...GATGGGAAGACTAGGGAGCCAGTGCCACGTTGAACAGAACAGTGGTTTAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp TGCCCACTTCTTCCTCAGCAGAGTAAGGGACTCTTTAATTTTATCAACCAGGTCCACAAGCTATCTGTCTaGCTTCAGCAGTTCTCATTT +
Preference number: 5 (lower is better)
Translates to: CPLLPQQSKGLFNFINQVHKLSV*LQQFSF
Trigger: AAATGAGAACTGCTGAAGCAAGACAGATAGCTTGTG...GACCTGGTTGATAAAATTAAAGAGTCCCTTACTCTGCTGAGGAAGAAGTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR CAA 90 bp ATATTCCTCTCCAAAACTGAGTTTCCTCTGATACAAAAGTATTTGCCTTCTGGAAAGCCCAGCTCCATCTaGCAAGACTCCCAGACTCTA +
Preference number: 5 (lower is better)
Translates to: IFLSKTEFPLIQKYLPSGKPSSI*QDSQTL
Trigger: TAGAGTCTGGGAGTCTTGCAAGATGGAGCTGGGCTT...TCCAGAAGGCAAATACTTTTGTATCAGAGGAAACTCAGTTTTGGAGAGGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp ATGCTGAGATGGCAGAAGTGCTGTATCATTAAAGGTGATTCAGCACTTCACAGCCTGATACAAAAGTATTaGCCTTCTGGAGAAGATATG +
Preference number: 5 (lower is better)
Translates to: MLRWQKCCIIKGDSALHSLIQKY*PSGEDM
Trigger: CATATCTTCTCCAGAAGGCAAATACTTTTGTATCAG...GCTGTGAAGTGCTGAATCACCTTTAATGATACAGCACTTCTGCCATCTCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp GAGTTTCCTCTGATACAAAAGTATTTGCCTTCTGGAGAAGATATGGTTTGCACCTATTGCGCCCTGCCTTaGCTAAACTATTTGGGAATT +
Preference number: 5 (lower is better)
Translates to: EFPLIQKYLPSGEDMVCTYCALP*LNYLGI
Trigger: AATTCCCAAATAGTTTAGCAAAGGCAGGGCGCAATA...GGTGCAAACCATATCTTCTCCAGAAGGCAAATACTTTTGTATCAGAGGAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS GCA 90 bp ACCAGGTCCTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTaGTTGATCCAGTTGTATTTGCTTATGAGTTTTTCTGGTAACTGC +
Preference number: 5 (lower is better)
Translates to: TRSSFFPSNFSPSFH*LIQLYLLMSFSGNC
Trigger: GCAGTTACCAGAAAAACTCATAAGCAAATACAACTGGATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAGGACCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508678.1
ENST00000514913.1
CDS-3UTR CAA 90 bp ATCAACCAGGTCCTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTGCTTCCATTTTCATACACGTaGCTTTCTGTGTATTTCCTC +
Preference number: 5 (lower is better)
Translates to: INQVLILPIKFQSKFPLLPFSYT*LSVYFL
Trigger: GAGGAAATACACAGAAAGCAACGTGTATGAAAATGG...AAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAGGACCTGGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503023.1
CDS-3UTR CAA 90 bp ATCAACCAGGTCCTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTGCTTCAGTCCAAGTTTCCATaGCTTGATCCAGTTGTATTT +
Preference number: 5 (lower is better)
Translates to: INQVLILPIKFQSKFPLLQSKFP*LDPVVF
Trigger: AAATACAACTGGATCAAGCAATGGAAACTTGGACTG...AAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAGGACCTGGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS-3UTR CAA 90 bp ATATTCCTCTCCAAAACTGAGTTTCCTCTGATACAAAAGTATTTGCCTTCTGGACACAAGCTATCTGTCTaGCTTCAGCAGTTCTCATTT +
Preference number: 5 (lower is better)
Translates to: IFLSKTEFPLIQKYLPSGHKLSV*LQQFSF
Trigger: AAATGAGAACTGCTGAAGCAAGACAGATAGCTTGTG...TCCAGAAGGCAAATACTTTTGTATCAGAGGAAACTCAGTTTTGGAGAGGAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp GATGAGGGGAAAGACTTGGTTAATTTCTCTTATCAAAAGCTAGTCTTCAGGACAGAACACCTTATCATTTaGAAGACTGCTCTAAGTGGA +
Preference number: 5 (lower is better)
Translates to: DEGKDLVNFSYQKLVFRTEHLII*KTALSG
Trigger: TCCACTTAGAGCAGTCTTCAAAATGATAAGGTGTTC...TGTCCTGAAGACTAGCTTTTGATAAGAGAAATTAACCAAGTCTTTCCCCTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp ATCAACAGATGTATATACAGAAGGAGCTCAGGATGTAAGGAGGGGAATCTGAAAACCAGTTTAGTTTTGTaGCTTTTCATTGGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: INRCIYRRSSGCKEGNLKTSLVL*LFIGSK
Trigger: CTTGGAACCAATGAAAAGCAACAAAACTAAACTGGT...TTTCAGATTCCCCTCCTTACATCCTGAGCTCCTTCTGTATATACATCTGTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS-3UTR CAA 90 bp TTTTATCAACCAGGTCCTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTCCAAGTTTCCATTGCTaGATCCAGTTGTATTTGCTT +
Preference number: 5 (lower is better)
Translates to: FYQPGPHSSHQISVQVSIPSFHC*IQLYLL
Trigger: AAGCAAATACAACTGGATCAAGCAATGGAAACTTGG...AATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAGGACCTGGTTGATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503023.1
ENST00000514913.1
CDS CCA 72 bp GTCTCGGCGCAGCTCGCGCCTGGCCACGCTTCGGGCTaGGGCATAGTCCCCCGACTCATGCGGTCGCTCGCG +
Preference number: 6 (lower is better)
Translates to: VSAQLAPGHASG*GIVPRLMRSLA
Trigger: CGCGAGCGACCGCATGAGTCGGGGGACTATGCCCCAGCCCGAAGCGTGGCCAGGCGCGAGCTGCGCCGAGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284274.5
ENST00000503023.1
ENST00000507335.1
CDS TCA 72 bp AGTTTTTCTGGTAACTGCAGCAGCAGCGTACCAGCATaGGCTCCGGGTCCTGCAGCCAGGGCGGCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: SFSGNCSSSVPA*APGPAARAAAP
Trigger: TGGGGCTGCCGCCCTGGCTGCAGGACCCGGAGCTCATGCTGGTACGCTGCTGCTGCAGTTACCAGAAAAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514913.1
CDS CCA 72 bp ATAGTGCCGATCGTCCTCAGCAATGAGCGTTACCACTaGCCAGTCCTTGGGTGGGTCGGTGGGGTAGACTGT +
Preference number: 6 (lower is better)
Translates to: IVPIVLSNERYH*PVLGWVGGVDC
Trigger: ACAGTCTACCCCACCGACCCACCCAAGGACTGGCCAGTGGTAACGCTCATTGCTGAGGACGATCGGCACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS TCA 72 bp CATGCGTCTCTCATAGACTGGTCTCCTCACACACTCTaGCGGGGATGTTATAGTGCCGATCGTCCTCAGCAA +
Preference number: 6 (lower is better)
Translates to: HASLIDWSPHTL*RGCYSADRPQQ
Trigger: TTGCTGAGGACGATCGGCACTATAACATCCCCGTCAGAGTGTGTGAGGAGACCAGTCTATGAGAGACGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284274.5
ENST00000506417.1
CDS CCA 72 bp ATTTCAACCTGTTCAAGACCACCAGTGTGTCCCACCTaGTTGAGGTGGTTCCTCAGAAGCTGTCCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: ISTCSRPPVCPT*LRWFLRSCPGS
Trigger: TGACCCAGGACAGCTTCTGAGGAACCACCTCAACCAGGTGGGACACACTGGTGGTCTTGAACAGGTTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS CAA 72 bp TCAACCTGTTCAAGACCACCAGTGTGTCCCACCTGGTaGAGGTGGTTCCTCAGAAGCTGTCCTGGGTCATTT +
Preference number: 6 (lower is better)
Translates to: STCSRPPVCPTW*RWFLRSCPGSF
Trigger: AAATGACCCAGGACAGCTTCTGAGGAACCACCTCAACCAGGTGGGACACACTGGTGGTCTTGAACAGGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS CAA 90 bp AGGAACATTTCAACCTGTTCAAGACCACCAGTGTGTCCCACCTGGTaGAGGTGGTTCCTCAGAAGCTGTCCTGGGTCATTTGATGTGTCC +
Preference number: 6 (lower is better)
Translates to: RNISTCSRPPVCPTW*RWFLRSCPGSFDVS
Trigger: GGACACATCAAATGACCCAGGACAGCTTCTGAGGAACCACCTCAACCAGGTGGGACACACTGGTGGTCTTGAACAGGTTGAAATGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS TCA 72 bp GTTGAGGTGGTTCCTCAGAAGCTGTCCTGGGTCATTTaGTGTGTCCCGAGCAAACAGAAGCACAGAGAAAAA +
Preference number: 6 (lower is better)
Translates to: VEVVPQKLSWVI*CVPSKQKHREK
Trigger: TTTTTCTCTGTGCTTCTGTTTGCTCGGGACACATCAAATGACCCAGGACAGCTTCTGAGGAACCACCTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284274.5
CDS CAA 90 bp TTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTGCTTGATCCAGTaGTATTTGCTTATGAGTTTTTCTGGTAACTGCAGCAGCAGCGTA +
Preference number: 6 (lower is better)
Translates to: FFPSNFSPSFHCLIQ*YLLMSFSGNCSSSV
Trigger: TACGCTGCTGCTGCAGTTACCAGAAAAACTCATAAGCAAATACAACTGGATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508678.1
ENST00000514913.1
CDS CAA 90 bp AGGTCCTCATTCTTCCCATCAAATTTCAGTCCAAGTTTCCATTGCTaGATCCAGTTGTATTTGCTTATGAGTTTTTCTGGTAACTGCAGC +
Preference number: 6 (lower is better)
Translates to: RSSFFPSNFSPSFHC*IQLYLLMSFSGNCS
Trigger: GCTGCAGTTACCAGAAAAACTCATAAGCAAATACAACTGGATCAAGCAATGGAAACTTGGACTGAAATTTGATGGGAAGAATGAGGACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508678.1
ENST00000514913.1