RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OSR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000164920

Ensembl transcript IDs: ENST00000297565.8, ENST00000435298.6, ENST00000457907.3, ENST00000518199.1, ENST00000520722.1, ENST00000520791.5, ENST00000520951.1, ENST00000521044.1, ENST00000522510.5, ENST00000523368.5

Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGGAGCTGCAGGTGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTaGAGGGCTAGGGATGCGACCCCCTGGGTAGGAGACGTGGAGAGG +
Preference number: 1 (lower is better)
Translates to: LELQVRLQQGKSWGQ*RARDATPWVGDVER
Trigger: CCTCTCCACGTCTCCTACCCAGGGGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCACCTGCAGCTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
3UTR CCA 90 bp TGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTaGAGCTGCAGGTGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGT +
Preference number: 1 (lower is better)
Translates to: WLSTVLSPPEEELTP*SCRCGCSKGRAGVS
Trigger: ACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCACCTGCAGCTCCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
3UTR-3UTR CCA 90 bp GTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAACGTGGAGAGGTGTCTaGGGAGGGGAGCAGCGGCGG +
Preference number: 2 (lower is better)
Translates to: VKGCSSVWLSTVLSPPEETWRGV*GGEQRR
Trigger: CCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGT...TTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
3UTR-3UTR CCA 90 bp GTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAAGGGATGCGACCCCCTaGGTAGGAGACGTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: VKGCSSVWLSTVLSPPEERDATP*VGDVER
Trigger: CCTCTCCACGTCTCCTACCCAGGGGGTCGCATCCCT...TTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
3UTR-3UTR TCA 90 bp GTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAAAGAGCTGGGGTCAGTaGAGGGCTAGGGATGCGACC +
Preference number: 2 (lower is better)
Translates to: VKGCSSVWLSTVLSPPEEKSWGQ*RARDAT
Trigger: GGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTT...TTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
3UTR-3UTR CCA 90 bp CATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAACGTGGAGAGGTGTCTaGGGAGGGGAGCAGCGGCGG +
Preference number: 2 (lower is better)
Translates to: HFPYLSASNKIPKQTKQQTWRGV*GGEQRR
Trigger: CCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGT...TTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
3UTR-3UTR TCA 90 bp ATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCAAGAGCTGGGGTCAGTaGAGGGCTAGGGATGCGACC +
Preference number: 2 (lower is better)
Translates to: IPKQTKQQNKDPQHYVQSKSWGQ*RARDAT
Trigger: GGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTT...GCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
3UTR-3UTR CCA 90 bp CATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAAGGGATGCGACCCCCTaGGTAGGAGACGTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: HFPYLSASNKIPKQTKQQRDATP*VGDVER
Trigger: CCTCTCCACGTCTCCTACCCAGGGGGTCGCATCCCT...TTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
3UTR-3UTR TCA 90 bp CATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAAAGAGCTGGGGTCAGTaGAGGGCTAGGGATGCGACC +
Preference number: 2 (lower is better)
Translates to: HFPYLSASNKIPKQTKQQKSWGQ*RARDAT
Trigger: GGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTT...TTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
3UTR-3UTR GCA 90 bp TTCCATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAATTAACTCCCTGGAGCTaGAGGTGCGGCTGCAGCAAG +
Preference number: 2 (lower is better)
Translates to: FHFPYLSASNKIPKQTKQLTPWS*RCGCSK
Trigger: CTTGCTGCAGCCGCACCTGCAGCTCCAGGGAGTTAA...TTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
3UTR-3UTR CCA 90 bp CATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAGCACGGGACAGATCCTaGGCTTCTCTAGAAGTCCTG +
Preference number: 2 (lower is better)
Translates to: HFPYLSASNKIPKQTKQQARDRS*ASLEVL
Trigger: CAGGACTTCTAGAGAAGCCCAGGATCTGTCCCGTGC...TTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435298.6
3UTR-3UTR CCA 90 bp TCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCGGATGTAGTAGTGTGTaGCTTTCTACAGTTCTCAGT +
Preference number: 2 (lower is better)
Translates to: SKCIQQDPKANKTTKQRPGCSSV*LSTVLS
Trigger: ACTGAGAACTGTAGAAAGCCACACACTACTACATCC...GGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
3UTR-3UTR TCA 90 bp CATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAATACAGAGCTCTAAAATaGGCTGTGAATATCTACAAG +
Preference number: 2 (lower is better)
Translates to: HFPYLSASNKIPKQTKQQYRALK*AVNIYK
Trigger: CTTGTAGATATTCACAGCTCATTTTAGAGCTCTGTA...TTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
3UTR GCA 72 bp CTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGAGCTaGAGGTGCGGCTGCAGCAAGGGAAGAGCTGGGGTC +
Preference number: 3 (lower is better)
Translates to: LSPPEEELTPWS*RCGCSKGRAGV
Trigger: GACCCCAGCTCTTCCCTTGCTGCAGCCGCACCTGCAGCTCCAGGGAGTTAACTCTTCTTCTGGGGGACTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp GGTAGGAGACGTGGAGAGGTGTCTGGGGAGGGGAGCAGCGGCGGCACGGGACAGGCTGTCGACTCCCGGTaGGGTCGGAGCCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: GRRRGEVSGEGSSGGTGQAVDSR*GRSPQP
Trigger: AGGCTGTGGGCTCCGACCTCACCGGGAGTCGACAGC...CTGTCCCGTGCCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGTCTCCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp GGTAGGAGACGTGGAGAGGTGTCTGGGGAGGGGAGCAGCGGCGGCACGGGACAGGATGGCAAGCCGGCGTaGAAGAGCGAAGCCGGCGCG +
Preference number: 4 (lower is better)
Translates to: GRRRGEVSGEGSSGGTGQDGKPA*KSEAGA
Trigger: CGCGCCGGCTTCGCTCTTGCACGCCGGCTTGCCATC...CTGTCCCGTGCCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGTCTCCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR CCA 90 bp GGTAGGAGACGTGGAGAGGTGTCTGGGGAGGGGAGCAGCGGCGGCACGGGACAGACGTGGAGAGGTGTCTaGGGAGGGGAGCAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: GRRRGEVSGEGSSGGTGQTWRGV*GGEQRR
Trigger: CCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGT...CTGTCCCGTGCCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGTCTCCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp GGTAGGAGACGTGGAGAGGTGTCTGGGGAGGGGAGCAGCGGCGGCACGGGACAGCGGAGCCCACAGCCTTaGAGGGCCATCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRRRGEVSGEGSSGGTGQRSPQP*RAITLQ
Trigger: CTGGAGGGTGATGGCCCTGCAAGGCTGTGGGCTCCG...CTGTCCCGTGCCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGTCTCCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GGTAGGAGACGTGGAGAGGTGTCTGGGGAGGGGAGCAGCGGCGGCACGGGACAGGAGCGGGATGGGCGCTaGCAGAGCCTTGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GRRRGEVSGEGSSGGTGQERDGR*QSLAPH
Trigger: ATGGGGAGCAAGGCTCTGCCAGCGCCCATCCCGCTC...CTGTCCCGTGCCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGTCTCCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GGTAGGAGACGTGGAGAGGTGTCTGGGGAGGGGAGCAGCGGCGGCACGGGACAGCCAGGCCGGGAGTCTTaGGCTTTAGTAGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GRRRGEVSGEGSSGGTGQPGRES*ALVAAP
Trigger: CGGGGCCGCTACTAAAGCCCAAGACTCCCGGCCTGG...CTGTCCCGTGCCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGTCTCCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR CCA 90 bp GGTAGGAGACGTGGAGAGGTGTCTGGGGAGGGGAGCAGCGGCGGCACGGGACAGGTCCTTGTGCAGGGCTaGGAGGACGTGGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: GRRRGEVSGEGSSGGTGQVLVQG*EDVGNG
Trigger: GCCATTGCCCACGTCCTCCCAGCCCTGCACAAGGAC...CTGTCCCGTGCCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGTCTCCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp GGTAGGAGACGTGGAGAGGTGTCTGGGGAGGGGAGCAGCGGCGGCACGGGACAGTTAACTCCCTGGAGCTaGAGGTGCGGCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GRRRGEVSGEGSSGGTGQLTPWS*RCGCSK
Trigger: CTTGCTGCAGCCGCACCTGCAGCTCCAGGGAGTTAA...CTGTCCCGTGCCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGTCTCCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCGAGCGGGATGGGCGCTaGCAGAGCCTTGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPERDGR*QSLAPH
Trigger: ATGGGGAGCAAGGCTCTGCCAGCGCCCATCCCGCTC...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCTACAGGCCCTGCAGGTaGTCCACCGTGGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPYRPCR*STVAGK
Trigger: CTTCCCGGCCACGGTGGACCACCTGCAGGGCCTGTA...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp TGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCCCTGGGCAGGAGTCGCGGACATaGTCTGGAGGACCGCGAGCA +
Preference number: 4 (lower is better)
Translates to: CSKGRAGVSEGLGMRPPGQESRT*SGGPRA
Trigger: TGCTCGCGGTCCTCCAGATCATGTCCGCGACTCCTG...CCCAGGGGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCCCTGGGAGAGGCCGGAGGGCGTaGGGCTCCGACAAAAACCCA +
Preference number: 4 (lower is better)
Translates to: CSKGRAGVSEGLGMRPPGRGRRA*GSDKNP
Trigger: TGGGTTTTTGTCGGAGCCCCACGCCCTCCGGCCTCT...CCCAGGGGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCAGGGATGCGACCCCCTaGGTAGGAGACGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPRDATP*VGDVER
Trigger: CCTCTCCACGTCTCCTACCCAGGGGGTCGCATCCCT...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GGTAGGAGACGTGGAGAGGTGTCTGGGGAGGGGAGCAGCGGCGGCACGGGACAGTACCCCAGCGTCCAGTaGTTCATGTGCATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GRRRGEVSGEGSSGGTGQYPSVQ*FMCMVC
Trigger: ACAGACCATGCACATGAACCACTGGACGCTGGGGTA...CTGTCCCGTGCCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGTCTCCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCGCGGATCCTCTTGCGTaGCAGCCACCGCCAAATTGG +
Preference number: 4 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPADPLA*QPPPNW
Trigger: CCAATTTGGCGGTGGCTGCCACGCAAGAGGATCCGC...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCCCTGGGCGGTGGGTTAACGGATaGGTCGTGAGATCCCACGCG +
Preference number: 4 (lower is better)
Translates to: CSKGRAGVSEGLGMRPPGRWVNG*VVRSHA
Trigger: CGCGTGGGATCTCACGACCCATCCGTTAACCCACCG...CCCAGGGGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR TCA 90 bp TGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCCCTGGGGGAAGGAGTAATTGGTaGGCTGCAGCGACGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CSKGRAGVSEGLGMRPPGGRSNW*AAATGG
Trigger: TCCACCCGTCGCTGCAGCTCACCAATTACTCCTTCC...CCCAGGGGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp TGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCCCTGGGGAGCGGGTGATCTCGTaGACATTGGGATACCCCAGC +
Preference number: 4 (lower is better)
Translates to: CSKGRAGVSEGLGMRPPGERVIS*TLGYPS
Trigger: GCTGGGGTATCCCAATGTGCACGAGATCACCCGCTC...CCCAGGGGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCGAGCGGGTGATCTCGTaGACATTGGGATACCCCAGC +
Preference number: 4 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPERVIS*TLGYPS
Trigger: GCTGGGGTATCCCAATGTGCACGAGATCACCCGCTC...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCTTAGGCGGATCCTCTTaGGTGGCAGCCACCGCCAAA +
Preference number: 4 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPLGGSS*VAATAK
Trigger: TTTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAA...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCTTAACTCCCTGGAGCTaGAGGTGCGGCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPLTPWS*RCGCSK
Trigger: CTTGCTGCAGCCGCACCTGCAGCTCCAGGGAGTTAA...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCCAGCCACCGCCAAATTaGCAAAGTCAAAACGGGGCC +
Preference number: 4 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPQPPPN*QSQNGA
Trigger: GGCCCCGTTTTGACTTTGCCAATTTGGCGGTGGCTG...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCGATCACAGTTTCGCCTaGACACTTTGCCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPDHSFA*TLCRTA
Trigger: AGCAGTGCGGCAAAGTGTTCAGGCGAAACTGTGATC...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGCGTCCCTCCCCAGGCTaGCCCAGGCCGGGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWRPSPG*PRPGVL
Trigger: CAAGACTCCCGGCCTGGGGCAGCCTGGGGAGGGACG...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR CCA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGAAGACCCGGGGTGCTTaGGGCCGGCGTTCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWKTRGA*GRRSAL
Trigger: GAGCGCTGAACGCCGGCCCCAAGCACCCCGGGTCTT...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGAGACCGTACAGGCCCTaGAGGTGGTCCACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWRPYRP*RWSTVA
Trigger: GGCCACGGTGGACCACCTGCAGGGCCTGTACGGTCT...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGAGGGCTGGGAGGACGTaGGCAATGGCCCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWRAGRT*AMAPCL
Trigger: CAAGCAGGGGGCCATTGCCCACGTCCTCCCAGCCCT...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp GTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAACGGAGCCCACAGCCTTaGAGGGCCATCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VKGCSSVWLSTVLSPPEERSPQP*RAITLQ
Trigger: CTGGAGGGTGATGGCCCTGCAAGGCTGTGGGCTCCG...TTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp TGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCGGGGCCGGTCCTTGTaGAGGGCTGGGAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: CSSVWLSTVLSPPEEELTRGRSL*RAGRTW
Trigger: CCACGTCCTCCCAGCCCTGCACAAGGACCGGCCCCG...AGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGGCAGAAAGGTCAACCTaGGCAGCCGCGCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWAERST*AAALRP
Trigger: GGGTCTGAGCGCGGCTGCCCAGGTTGACCTTTCTGC...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCAGGTTCTTCCACATGTaGGACATTTGTGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPRFFHM*DICVEI
Trigger: AATCTCCACACAAATGTCCCACATGTGGAAGAACCT...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297565.8
ENST00000457907.3
CDS-3UTR CCA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGAGGGATGCGACCCCCTaGGTAGGAGACGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWRDATP*VGDVER
Trigger: CCTCTCCACGTCTCCTACCCAGGGGGTCGCATCCCT...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCCCTGGGGGATGTAGTAGTGTGTaGCTTTCTACAGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: CSKGRAGVSEGLGMRPPGGCSSV*LSTVLS
Trigger: ACTGAGAACTGTAGAAAGCCACACACTACTACATCC...CCCAGGGGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp GTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAATGGTCTGTACCGCGCTaGGACCGTACAGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VKGCSSVWLSTVLSPPEEWSVPR*DRTGPA
Trigger: TGCAGGGCCTGTACGGTCTCAGCGCGGTACAGACCA...TTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp CATATACTCTTTGTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTTCCTGCCGCGGGGTGTaGGTCAGGCTGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: HILFVKGCSSVWLSTVLSSCRGV*VRLCRR
Trigger: GCGGCGGCACAGCCTGACTCACACCCCGCGGCAGGA...ACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCACAAAGAGTATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp GGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAAGACCGTACAGGCCCTaGAGGTGGTCCACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: GCSSVWLSTVLSPPEEELRPYRP*RWSTVA
Trigger: GGCCACGGTGGACCACCTGCAGGGCCTGTACGGTCT...TAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTAAGACCCGGGGTGCTTaGGGCCGGCGTTCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: CSSVWLSTVLSPPEEELTKTRGA*GRRSAL
Trigger: GAGCGCTGAACGCCGGCCCCAAGCACCCCGGGTCTT...AGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGCAATGGCCCCCTGCTTaGGGTGGAATAGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWQWPPA*GGIGGW
Trigger: CCACCCACCTATTCCACCCCAAGCAGGGGGCCATTG...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGGCGGATCCTCTTGCGTaGCAGCCACCGCCAAATTGG +
Preference number: 4 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWADPLA*QPPPNW
Trigger: CCAATTTGGCGGTGGCTGCCACGCAAGAGGATCCGC...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGGGCCTCTCGTCCGTGTaGGTCCTCTCATGGATGAGC +
Preference number: 4 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWGLSSV*VLSWMS
Trigger: GCTCATCCATGAGAGGACCCACACGGACGAGAGGCC...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp GGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTATGGTCTGTACCGCGCTaGGACCGTACAGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GCSSVWLSTVLSPPEEELWSVPR*DRTGPA
Trigger: TGCAGGGCCTGTACGGTCTCAGCGCGGTACAGACCA...TAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCATGTGTAAAGTTTTGTaGACTGCTAGAGTTCTAGAC +
Preference number: 4 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPMCKVL*TARVLD
Trigger: GTCTAGAACTCTAGCAGTTCACAAAACTTTACACAT...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp GGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTATGTAAAGACCCGGGGTaGTTGGGGCCGGCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GCSSVWLSTVLSPPEEELCKDPG*LGPAFS
Trigger: GCTGAACGCCGGCCCCAAGCACCCCGGGTCTTTACA...TAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAGCAGAAAGGTCAACCTaGGCAGCCGCGCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: GCSSVWLSTVLSPPEEELAERST*AAALRP
Trigger: GGGTCTGAGCGCGGCTGCCCAGGTTGACCTTTCTGC...TAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp CATATACTCTTTGTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTAGCTGCAGCGACGGGTaGAGCGGGATGGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: HILFVKGCSSVWLSTVLSSCSDG*SGMGAG
Trigger: GCCAGCGCCCATCCCGCTCCACCCGTCGCTGCAGCT...ACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCACAAAGAGTATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTTACAGGCCCTGCAGGTaGTCCACCGTGGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: CSSVWLSTVLSPPEEELTYRPCR*STVAGK
Trigger: CTTCCCGGCCACGGTGGACCACCTGCAGGGCCTGTA...AGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAACAATGGCCCCCTGCTTaGGGTGGAATAGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VKGCSSVWLSTVLSPPEEQWPPA*GGIGGW
Trigger: CCACCCACCTATTCCACCCCAAGCAGGGGGCCATTG...TTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTAGGGCTGGGAGGACGTaGGCAATGGCCCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CSSVWLSTVLSPPEEELTRAGRT*AMAPCL
Trigger: CAAGCAGGGGGCCATTGCCCACGTCCTCCCAGCCCT...AGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp GATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGTCCTGCCGCGGGGTGTaGGTCAGGCTGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: DPKANKTTKQRPTTLCTESCRGV*VRLCRR
Trigger: GCGGCGGCACAGCCTGACTCACACCCCGCGGCAGGA...CTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGGTCCAGTGGTTCATGTaGATGGTCTGTACCGCGCTG +
Preference number: 4 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWVQWFM*MVCTAL
Trigger: CAGCGCGGTACAGACCATGCACATGAACCACTGGAC...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp GTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGCGGGTGATCTCGTaGACATTGGGATACCCCAGC +
Preference number: 4 (lower is better)
Translates to: VKGCSSVWLSTVLSPPEEERVIS*TLGYPS
Trigger: GCTGGGGTATCCCAATGTGCACGAGATCACCCGCTC...TTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTGTCCTTGTGCAGGGCTaGGAGGACGTGGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: CSSVWLSTVLSPPEEELTVLVQG*EDVGNG
Trigger: GCCATTGCCCACGTCCTCCCAGCCCTGCACAAGGAC...AGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGGCACGGGACAGATCCTaGGCTTCTCTAGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWARDRS*ASLEVL
Trigger: CAGGACTTCTAGAGAAGCCCAGGATCTGTCCCGTGC...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp CCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTCTTGGGCCAGAGGGCCCTaGGAGGGGCTCACCTCGCCC +
Preference number: 4 (lower is better)
Translates to: PKQTKQQNKDPQHYVQSSWARGP*EGLTSP
Trigger: GGGCGAGGTGAGCCCCTCCCAGGGCCCTCTGGCCCA...AGAGCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR TCA 90 bp TCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCGCTGTCGACTCCCGGTaGGGTCGGAGCCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SKCIQQDPKANKTTKQRPAVDSR*GRSPQP
Trigger: AGGCTGTGGGCTCCGACCTCACCGGGAGTCGACAGC...GGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp GGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAGGAAGGAGTAATTGGTaGGCTGCAGCGACGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GCSSVWLSTVLSPPEEELGRSNW*AAATGG
Trigger: TCCACCCGTCGCTGCAGCTCACCAATTACTCCTTCC...TAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGTCCTGCCGCGGGGTGTaGGTCAGGCTGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQSCRGV*VRLCRR
Trigger: GCGGCGGCACAGCCTGACTCACACCCCGCGGCAGGA...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp GTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGTCCAGTGGTTCATGTaGATGGTCTGTACCGCGCTG +
Preference number: 4 (lower is better)
Translates to: VKGCSSVWLSTVLSPPEEVQWFM*MVCTAL
Trigger: CAGCGCGGTACAGACCATGCACATGAACCACTGGAC...TTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp TGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTTGGGCAATGGCCCCCTaGTTGGGGTGGAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: CSSVWLSTVLSPPEEELTWAMAP*LGWNRW
Trigger: CCACCTATTCCACCCCAAGCAGGGGGCCATTGCCCA...AGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp CCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTCTGCCCTCTGTCGCCGCTaGGCCTCGGAGCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PKQTKQQNKDPQHYVQSSALCRR*ASELLG
Trigger: TCCCAGGAGCTCCGAGGCGCAGCGGCGACAGAGGGC...AGAGCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR CCA 90 bp TCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACGGGTGGAGCGGGATaGGCGCTGGCAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SKCIQQDPKANKTTKQRPTGGAG*ALAEPC
Trigger: GCAAGGCTCTGCCAGCGCCCATCCCGCTCCACCCGT...GGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGAGCTGCAGCGACGGGTaGAGCGGGATGGGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: DPKANKTTKQRPTTLCTESCSDG*SGMGAG
Trigger: GCCAGCGCCCATCCCGCTCCACCCGTCGCTGCAGCT...CTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp CATATACTCTTTGTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTGGAGGACGTGGGCAATaGCCCCCTGCTTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HILFVKGCSSVWLSTVLSGGRGQ*PPAWGG
Trigger: TCCACCCCAAGCAGGGGGCCATTGCCCACGTCCTCC...ACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCACAAAGAGTATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp ATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTGCCGCCGCGCCCTGTaGCCGCCTTTCCCGCGCTTA +
Preference number: 4 (lower is better)
Translates to: IPKQTKQQNKDPQHYVQSCRRAL*PPFPRL
Trigger: TAAGCGCGGGAAAGGCGGCCACAGGGCGCGGCGGCA...GCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR TCA 90 bp ATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCGCTGTCGACTCCCGGTaGGGTCGGAGCCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: IPKQTKQQNKDPQHYVQSAVDSR*GRSPQP
Trigger: AGGCTGTGGGCTCCGACCTCACCGGGAGTCGACAGC...GCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp TGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCGGAGTCAATTTACTaGGGCCCGAGATGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: CSSVWLSTVLSPPEEELTPESIY*GPRWGY
Trigger: GTAGCCCCATCTCGGGCCTCAGTAAATTGACTCCGG...AGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp CATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAACGGGGCCGGTCCTTGTaGAGGGCTGGGAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: HFPYLSASNKIPKQTKQQRGRSL*RAGRTW
Trigger: CCACGTCCTCCCAGCCCTGCACAAGGACCGGCCCCG...TTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGACGGGGCCGGTCCTTGTaGAGGGCTGGGAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRRGRSL*RAGRTW
Trigger: CCACGTCCTCCCAGCCCTGCACAAGGACCGGCCCCG...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp CCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTCTAAGACCCGGGGTGCTTaGGGCCGGCGTTCAGCGCTC +
Preference number: 4 (lower is better)
Translates to: PKQTKQQNKDPQHYVQSSKTRGA*GRRSAL
Trigger: GAGCGCTGAACGCCGGCCCCAAGCACCCCGGGTCTT...AGAGCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGACGGGTGGAGCGGGATaGGCGCTGGCAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: DPKANKTTKQRPTTLCTETGGAG*ALAEPC
Trigger: GCAAGGCTCTGCCAGCGCCCATCCCGCTCCACCCGT...CTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp CCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTCTACGTGGAGAGGTGTCTaGGGAGGGGAGCAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: PKQTKQQNKDPQHYVQSSTWRGV*GGEQRR
Trigger: CCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGT...AGAGCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp CATATACTCTTTGTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTAAGAGCTGGGGTCAGTaGAGGGCTAGGGATGCGACC +
Preference number: 4 (lower is better)
Translates to: HILFVKGCSSVWLSTVLSKSWGQ*RARDAT
Trigger: GGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTT...ACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCACAAAGAGTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp CATATACTCTTTGTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTTGGGCAATGGCCCCCTaGTTGGGGTGGAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: HILFVKGCSSVWLSTVLSWAMAP*LGWNRW
Trigger: CCACCTATTCCACCCCAAGCAGGGGGCCATTGCCCA...ACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCACAAAGAGTATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGACGGGTGGAGCGGGATaGGCGCTGGCAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQTGGAG*ALAEPC
Trigger: GCAAGGCTCTGCCAGCGCCCATCCCGCTCCACCCGT...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGGCAGGTGGTCCACCGTaGCCGGGAAGGTGTTCACGG +
Preference number: 4 (lower is better)
Translates to: DPKANKTTKQRPTTLCTEAGGPP*PGRCSR
Trigger: CCGTGAACACCTTCCCGGCCACGGTGGACCACCTGC...CTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp CCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTCTGCAGGTGGTCCACCGTaGCCGGGAAGGTGTTCACGG +
Preference number: 4 (lower is better)
Translates to: PKQTKQQNKDPQHYVQSSAGGPP*PGRCSR
Trigger: CCGTGAACACCTTCCCGGCCACGGTGGACCACCTGC...AGAGCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTATACCCCAGCGTCCAGTaGTTCATGTGCATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GCSSVWLSTVLSPPEEELYPSVQ*FMCMVC
Trigger: ACAGACCATGCACATGAACCACTGGACGCTGGGGTA...TAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTGCCCCCTGCTTGGGGTaGAATAGGTGGGTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: CSSVWLSTVLSPPEEELTAPCLG*NRWVVK
Trigger: TTTTACCACCCACCTATTCCACCCCAAGCAGGGGGC...AGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAACGTGGAGAGGTGTCTaGGGAGGGGAGCAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRTWRGV*GGEQRR
Trigger: CCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGT...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp ATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCCAGGAGTCGCGGACATaGTCTGGAGGACCGCGAGCA +
Preference number: 4 (lower is better)
Translates to: IPKQTKQQNKDPQHYVQSQESRT*SGGPRA
Trigger: TGCTCGCGGTCCTCCAGATCATGTCCGCGACTCCTG...GCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp CATATACTCTTTGTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCACCTCGCCCCGCACTaGCCTCGGAGGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HILFVKGCSSVWLSTVLSHLAPH*PRRFSF
Trigger: AAAAGAAAACCTCCGAGGTCAGTGCGGGGCGAGGTG...ACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCACAAAGAGTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR GCA 90 bp TTCCATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACGGAGCCCACAGCCTTaGAGGGCCATCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FHFPYLSASNKIPKQTKQRSPQP*RAITLQ
Trigger: CTGGAGGGTGATGGCCCTGCAAGGCTGTGGGCTCCG...TTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAAGACCGTACAGGCCCTaGAGGTGGTCCACCGTGGCC +
Preference number: 4 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRRPYRP*RWSTVA
Trigger: GGCCACGGTGGACCACCTGCAGGGCCTGTACGGTCT...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGAGAGGCCGGAGGGCGTaGGGCTCCGACAAAAACCCA +
Preference number: 4 (lower is better)
Translates to: DPKANKTTKQRPTTLCTERGRRA*GSDKNP
Trigger: TGGGTTTTTGTCGGAGCCCCACGCCCTCCGGCCTCT...CTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TTCCATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAAGAGCGGGATGGGCGCTaGCAGAGCCTTGCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: FHFPYLSASNKIPKQTKQERDGR*QSLAPH
Trigger: ATGGGGAGCAAGGCTCTGCCAGCGCCCATCCCGCTC...TTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TTCCATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAAGCAGGTGGTCCACCGTaGCCGGGAAGGTGTTCACGG +
Preference number: 4 (lower is better)
Translates to: FHFPYLSASNKIPKQTKQAGGPP*PGRCSR
Trigger: CCGTGAACACCTTCCCGGCCACGGTGGACCACCTGC...TTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TTCCATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAATACAGGCCCTGCAGGTaGTCCACCGTGGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: FHFPYLSASNKIPKQTKQYRPCR*STVAGK
Trigger: CTTCCCGGCCACGGTGGACCACCTGCAGGGCCTGTA...TTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCCAATGGCCCCCTGCTTaGGGTGGAATAGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SKCIQQDPKANKTTKQRPQWPPA*GGIGGW
Trigger: CCACCCACCTATTCCACCCCAAGCAGGGGGCCATTG...GGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp CATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAGGAGGACGTGGGCAATaGCCCCCTGCTTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HFPYLSASNKIPKQTKQQGGRGQ*PPAWGG
Trigger: TCCACCCCAAGCAGGGGGCCATTGCCCACGTCCTCC...TTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGGAGGACGTGGGCAATaGCCCCCTGCTTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRGGRGQ*PPAWGG
Trigger: TCCACCCCAAGCAGGGGGCCATTGCCCACGTCCTCC...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp ATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCGTCCTTGTGCAGGGCTaGGAGGACGTGGGCAATGGC +
Preference number: 4 (lower is better)
Translates to: IPKQTKQQNKDPQHYVQSVLVQG*EDVGNG
Trigger: GCCATTGCCCACGTCCTCCCAGCCCTGCACAAGGAC...GCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCGCGGATCCTCTTGCGTaGCAGCCACCGCCAAATTGG +
Preference number: 4 (lower is better)
Translates to: SKCIQQDPKANKTTKQRPADPLA*QPPPNW
Trigger: CCAATTTGGCGGTGGCTGCCACGCAAGAGGATCCGC...GGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGCCGCGCTTACCCGGATaGCAAGCCGGCGTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQPRLPG*QAGVQE
Trigger: CTCTTGCACGCCGGCTTGCCATCCGGGTAAGCGCGG...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR TCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGTGGTCTGTACCGCGCTaGGACCGTACAGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQWSVPR*DRTGPA
Trigger: TGCAGGGCCTGTACGGTCTCAGCGCGGTACAGACCA...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGTGTAAAGACCCGGGGTaGTTGGGGCCGGCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQCKDPG*LGPAFS
Trigger: GCTGAACGCCGGCCCCAAGCACCCCGGGTCTTTACA...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp CCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTCTGCGCTGGCAGAGCCTTaGTCCCCATTTTCCGGGATG +
Preference number: 4 (lower is better)
Translates to: PKQTKQQNKDPQHYVQSSALAEP*SPFSGM
Trigger: CATCCCGGAAAATGGGGAGCAAGGCTCTGCCAGCGC...AGAGCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp ATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTGGGCAATGGCCCCCTaGTTGGGGTGGAATAGGTGG +
Preference number: 4 (lower is better)
Translates to: IPKQTKQQNKDPQHYVQSWAMAP*LGWNRW
Trigger: CCACCTATTCCACCCCAAGCAGGGGGCCATTGCCCA...GCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp CATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAAGAGGCCGGAGGGCGTaGGGCTCCGACAAAAACCCA +
Preference number: 4 (lower is better)
Translates to: HFPYLSASNKIPKQTKQQRGRRA*GSDKNP
Trigger: TGGGTTTTTGTCGGAGCCCCACGCCCTCCGGCCTCT...TTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp CCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTCTGGCCTCTCGTCCGTGTaGGTCCTCTCATGGATGAGC +
Preference number: 4 (lower is better)
Translates to: PKQTKQQNKDPQHYVQSSGLSSV*VLSWMS
Trigger: GCTCATCCATGAGAGGACCCACACGGACGAGAGGCC...AGAGCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp CATATACTCTTTGTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTGCACGGGACAGATCCTaGGCTTCTCTAGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: HILFVKGCSSVWLSTVLSARDRS*ASLEVL
Trigger: CAGGACTTCTAGAGAAGCCCAGGATCTGTCCCGTGC...ACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCACAAAGAGTATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGGGATGTAGTAGTGTGTaGCTTTCTACAGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWGCSSV*LSTVLS
Trigger: ACTGAGAACTGTAGAAAGCCACACACTACTACATCC...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TTCCATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAAGCGCCTCGGAGCTCCTaGGAACGGTGGGTTAACGGA +
Preference number: 4 (lower is better)
Translates to: FHFPYLSASNKIPKQTKQAPRSS*ERWVNG
Trigger: TCCGTTAACCCACCGTTCCCAGGAGCTCCGAGGCGC...TTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR TCA 90 bp CCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTCTCCGGAGTCAATTTACTaGGGCCCGAGATGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: PKQTKQQNKDPQHYVQSSPESIY*GPRWGY
Trigger: GTAGCCCCATCTCGGGCCTCAGTAAATTGACTCCGG...AGAGCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp TTCCATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAAAAGAGCTGGGGTCAGTaGAGGGCTAGGGATGCGACC +
Preference number: 4 (lower is better)
Translates to: FHFPYLSASNKIPKQTKQKSWGQ*RARDAT
Trigger: GGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTT...TTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGTTAACGGATGGGTCGTaGGATCCCACGCGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQLTDGS*DPTRCA
Trigger: AGCGCAGCGCGTGGGATCTCACGACCCATCCGTTAA...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR GCA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCGCTGGCAGAGCCTTaGTCCCCATTTTCCGGGATG +
Preference number: 4 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRALAEP*SPFSGM
Trigger: CATCCCGGAAAATGGGGAGCAAGGCTCTGCCAGCGC...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp GATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGTTAGGCGGATCCTCTTaGGTGGCAGCCACCGCCAAA +
Preference number: 4 (lower is better)
Translates to: DPKANKTTKQRPTTLCTELGGSS*VAATAK
Trigger: TTTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAA...CTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGGCCTCTCGTCCGTGTaGGTCCTCTCATGGATGAGC +
Preference number: 4 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRGLSSV*VLSWMS
Trigger: GCTCATCCATGAGAGGACCCACACGGACGAGAGGCC...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGGATGTAGTAGTGTGTaGCTTTCTACAGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: VKGCSSVWLSTVLSPPEEGCSSV*LSTVLS
Trigger: ACTGAGAACTGTAGAAAGCCACACACTACTACATCC...TTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp CATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAGGAAGGAGTAATTGGTaGGCTGCAGCGACGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HFPYLSASNKIPKQTKQQGRSNW*AAATGG
Trigger: TCCACCCGTCGCTGCAGCTCACCAATTACTCCTTCC...TTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGACCGGAGTCAATTTACTaGGGCCCGAGATGGGGCTAC +
Preference number: 4 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRPESIY*GPRWGY
Trigger: GTAGCCCCATCTCGGGCCTCAGTAAATTGACTCCGG...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGTTAGGCGGATCCTCTTaGGTGGCAGCCACCGCCAAA +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQLGGSS*VAATAK
Trigger: TTTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAA...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGATTAACTCCCTGGAGCTaGAGGTGCGGCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRLTPWS*RCGCSK
Trigger: CTTGCTGCAGCCGCACCTGCAGCTCCAGGGAGTTAA...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp TCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCTACCCCAGCGTCCAGTaGTTCATGTGCATGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SKCIQQDPKANKTTKQRPYPSVQ*FMCMVC
Trigger: ACAGACCATGCACATGAACCACTGGACGCTGGGGTA...GGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCAGCCACCGCCAAATTaGCAAAGTCAAAACGGGGCC +
Preference number: 4 (lower is better)
Translates to: DPKANKTTKQRPTTLCTEQPPPN*QSQNGA
Trigger: GGCCCCGTTTTGACTTTGCCAATTTGGCGGTGGCTG...CTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp GGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAAGGTTCTTCCACATGTaGGACATTTGTGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: GCSSVWLSTVLSPPEEELRFFHM*DICVEI
Trigger: AATCTCCACACAAATGTCCCACATGTGGAAGAACCT...TAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297565.8
ENST00000457907.3
CDS-3UTR CCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTCCTGGGAACGGTaGGTTAACGGATGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQSSWER*VNGWVV
Trigger: CACGACCCATCCGTTAACCCACCGTTCCCAGGAGCT...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR TCA 90 bp CCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTCTGCTTGGAAAGGTCATTaGGTCCACGCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: PKQTKQQNKDPQHYVQSSAWKGH*VHAWQT
Trigger: AGTTTGCCAGGCGTGGACTCAATGACCTTTCCAAGC...AGAGCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp GATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGGATCACAGTTTCGCCTaGACACTTTGCCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: DPKANKTTKQRPTTLCTEDHSFA*TLCRTA
Trigger: AGCAGTGCGGCAAAGTGTTCAGGCGAAACTGTGATC...CTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp ATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCGATCACAGTTTCGCCTaGACACTTTGCCGCACTGCT +
Preference number: 4 (lower is better)
Translates to: IPKQTKQQNKDPQHYVQSDHSFA*TLCRTA
Trigger: AGCAGTGCGGCAAAGTGTTCAGGCGAAACTGTGATC...GCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp GTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAATACAGAGCTCTAAAATaGGCTGTGAATATCTACAAG +
Preference number: 4 (lower is better)
Translates to: VKGCSSVWLSTVLSPPEEYRALK*AVNIYK
Trigger: CTTGTAGATATTCACAGCTCATTTTAGAGCTCTGTA...TTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR GCA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGTCCAGTGGTTCATGTaGATGGTCTGTACCGCGCTG +
Preference number: 4 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRVQWFM*MVCTAL
Trigger: CAGCGCGGTACAGACCATGCACATGAACCACTGGAC...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCCCCCTGCTTGGGGTaGAATAGGTGGGTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRAPCLG*NRWVVK
Trigger: TTTTACCACCCACCTATTCCACCCCAAGCAGGGGGC...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGGCCCCCTGCTTGGGGTaGAATAGGTGGGTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQAPCLG*NRWVVK
Trigger: TTTTACCACCCACCTATTCCACCCCAAGCAGGGGGC...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGCAGCCACCGCCAAATTaGCAAAGTCAAAACGGGGCC +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQQPPPN*QSQNGA
Trigger: GGCCCCGTTTTGACTTTGCCAATTTGGCGGTGGCTG...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CCA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCACGGGACAGATCCTaGGCTTCTCTAGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRARDRS*ASLEVL
Trigger: CAGGACTTCTAGAGAAGCCCAGGATCTGTCCCGTGC...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGGCTTGGAAAGGTCATTaGGTCCACGCCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQAWKGH*VHAWQT
Trigger: AGTTTGCCAGGCGTGGACTCAATGACCTTTCCAAGC...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp ATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTACAGAGCTCTAAAATaGGCTGTGAATATCTACAAG +
Preference number: 4 (lower is better)
Translates to: IPKQTKQQNKDPQHYVQSYRALK*AVNIYK
Trigger: CTTGTAGATATTCACAGCTCATTTTAGAGCTCTGTA...GCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGATGTGTAAAGTTTTGTaGACTGCTAGAGTTCTAGAC +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQMCKVL*TARVLD
Trigger: GTCTAGAACTCTAGCAGTTCACAAAACTTTACACAT...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAATGTGTAAAGTTTTGTaGACTGCTAGAGTTCTAGAC +
Preference number: 4 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRMCKVL*TARVLD
Trigger: GTCTAGAACTCTAGCAGTTCACAAAACTTTACACAT...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR TCA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGTACAGAGCTCTAAAATaGGCTGTGAATATCTACAAG +
Preference number: 4 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQYRALK*AVNIYK
Trigger: CTTGTAGATATTCACAGCTCATTTTAGAGCTCTGTA...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS CCA 90 bp CGCTGCCGCCGCGCCCTGTGGCCGCCTTTCCCGCGCTTACCCGGATaGCAAGCCGGCGTGCAAGAGCGAAGCCGGCGCGCTTCATCCTCC +
Preference number: 5 (lower is better)
Translates to: RCRRALWPPFPRLPG*QAGVQERSRRASSS
Trigger: GGAGGATGAAGCGCGCCGGCTTCGCTCTTGCACGCCGGCTTGCCATCCGGGTAAGCGCGGGAAAGGCGGCCACAGGGCGCGGCGGCAGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS CCA 90 bp GGATGGGTCGTGAGATCCCACGCGCTGCGCTGCCGCCGCGCCCTGTaGCCGCCTTTCCCGCGCTTACCCGGATGGCAAGCCGGCGTGCAA +
Preference number: 5 (lower is better)
Translates to: GWVVRSHALRCRRAL*PPFPRLPGWQAGVQ
Trigger: TTGCACGCCGGCTTGCCATCCGGGTAAGCGCGGGAAAGGCGGCCACAGGGCGCGGCGGCAGCGCAGCGCGTGGGATCTCACGACCCATCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS TCA 90 bp CTGCGCCTCGGAGCTCCTGGGAACGGTGGGTTAACGGATGGGTCGTaGGATCCCACGCGCTGCGCTGCCGCCGCGCCCTGTGGCCGCCTT +
Preference number: 5 (lower is better)
Translates to: LRLGAPGNGGLTDGS*DPTRCAAAAPCGRL
Trigger: AAGGCGGCCACAGGGCGCGGCGGCAGCGCAGCGCGTGGGATCTCACGACCCATCCGTTAACCCACCGTTCCCAGGAGCTCCGAGGCGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS GCA 90 bp CCCTGTGGCCGCCTTTCCCGCGCTTACCCGGATGGCAAGCCGGCGTaGAAGAGCGAAGCCGGCGCGCTTCATCCTCCTGGGCCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: PCGRLSRAYPDGKPA*KSEAGALHPPGPEG
Trigger: GCCCTCTGGCCCAGGAGGATGAAGCGCGCCGGCTTCGCTCTTGCACGCCGGCTTGCCATCCGGGTAAGCGCGGGAAAGGCGGCCACAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS GCA 90 bp GAACGGTGGGTTAACGGATGGGTCGTGAGATCCCACGCGCTGCGCTaGCGCCGCGCCCTGTGGCCGCCTTTCCCGCGCTTACCCGGATGG +
Preference number: 5 (lower is better)
Translates to: ERWVNGWVVRSHALR*RRALWPPFPRLPGW
Trigger: CCATCCGGGTAAGCGCGGGAAAGGCGGCCACAGGGCGCGGCGGCAGCGCAGCGCGTGGGATCTCACGACCCATCCGTTAACCCACCGTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS-3UTR CAA 90 bp GGTAGGAGACGTGGAGAGGTGTCTGGGGAGGGGAGCAGCGGCGGCACGGGACAGAAAGACCCGGGGTGCTaGGGGCCGGCGTTCAGCGCT +
Preference number: 5 (lower is better)
Translates to: GRRRGEVSGEGSSGGTGQKDPGC*GPAFSA
Trigger: AGCGCTGAACGCCGGCCCCAAGCACCCCGGGTCTTT...CTGTCCCGTGCCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGTCTCCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp GGTAGGAGACGTGGAGAGGTGTCTGGGGAGGGGAGCAGCGGCGGCACGGGACAGGGCGCTGGCAGAGCCTaGCTCCCCATTTTCCGGGAT +
Preference number: 5 (lower is better)
Translates to: GRRRGEVSGEGSSGGTGQGAGRA*LPIFRD
Trigger: ATCCCGGAAAATGGGGAGCAAGGCTCTGCCAGCGCC...CTGTCCCGTGCCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGTCTCCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp GGTAGGAGACGTGGAGAGGTGTCTGGGGAGGGGAGCAGCGGCGGCACGGGACAGGCAATGGCCCCCTGCTaGGGGTGGAATAGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: GRRRGEVSGEGSSGGTGQAMAPC*GWNRWV
Trigger: CACCCACCTATTCCACCCCAAGCAGGGGGCCATTGC...CTGTCCCGTGCCGCCGCTGCTCCCCTCCCCAGACACCTCTCCACGTCTCCTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS TCA 90 bp CCCAGAACCTCGCTCTTCGGCGAACCTCTCGCTGTCGACTCCCGGTaGGGTCGGAGCCCACAGCCTTGCAGGGCCATCACCCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: PRTSLFGEPLAVDSR*GRSPQPCRAITLQQ
Trigger: CTGCTGGAGGGTGATGGCCCTGCAAGGCTGTGGGCTCCGACCTCACCGGGAGTCGACAGCGAGAGGTTCGCCGAAGAGCGAGGTTCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000520722.1
ENST00000520791.5
ENST00000521044.1
ENST00000523368.5
CDS-3UTR CAA 90 bp TGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCCCTGGGAAAGACCCGGGGTGCTaGGGGCCGGCGTTCAGCGCT +
Preference number: 5 (lower is better)
Translates to: CSKGRAGVSEGLGMRPPGKDPGC*GPAFSA
Trigger: AGCGCTGAACGCCGGCCCCAAGCACCCCGGGTCTTT...CCCAGGGGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS GCA 90 bp TGGTTCATGTGCATGGTCTGTACCGCGCTGAGACCGTACAGGCCCTaGAGGTGGTCCACCGTGGCCGGGAAGGTGTTCACGGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: WFMCMVCTALRPYRP*RWSTVAGKVFTASR
Trigger: GCGGGAGGCCGTGAACACCTTCCCGGCCACGGTGGACCACCTGCAGGGCCTGTACGGTCTCAGCGCGGTACAGACCATGCACATGAACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521044.1
CDS CCA 90 bp TCGTCAGAGTCTGTGGACGCGGACTGTGTAAAGACCCGGGGTGCTTaGGGCCGGCGTTCAGCGCTCGCCCAGAACCTCGCTCTTCGGCGA +
Preference number: 5 (lower is better)
Translates to: SSESVDADCVKTRGA*GRRSALAQNLALRR
Trigger: TCGCCGAAGAGCGAGGTTCTGGGCGAGCGCTGAACGCCGGCCCCAAGCACCCCGGGTCTTTACACAGTCCGCGTCCACAGACTCTGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000520722.1
ENST00000520791.5
ENST00000521044.1
ENST00000523368.5
CDS GCA 90 bp GTCTTCGTCAGAGTCTGTGGACGCGGACTGTGTAAAGACCCGGGGTaGTTGGGGCCGGCGTTCAGCGCTCGCCCAGAACCTCGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: VFVRVCGRGLCKDPG*LGPAFSARPEPRSS
Trigger: CGAAGAGCGAGGTTCTGGGCGAGCGCTGAACGCCGGCCCCAAGCACCCCGGGTCTTTACACAGTCCGCGTCCACAGACTCTGACGAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000520722.1
ENST00000520791.5
ENST00000521044.1
ENST00000523368.5
CDS GCA 90 bp TGGTTCATGTGCATGGTCTGTACCGCGCTGAGACCGTACAGGCCCTaGAGGTGGTCCACCGTGGCCGGGAAGGTGTTCACGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WFMCMVCTALRPYRP*RWSTVAGKVFTACR
Trigger: CCTGCAGGCCGTGAACACCTTCCCGGCCACGGTGGACCACCTGCAGGGCCTGTACGGTCTCAGCGCGGTACAGACCATGCACATGAACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000522510.5
ENST00000523368.5
CDS CCA 90 bp ATGTGCATGGTCTGTACCGCGCTGAGACCGTACAGGCCCTGCAGGTaGTCCACCGTGGCCGGGAAGGTGTTCACGGCCTGCAGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: MCMVCTALRPYRPCR*STVAGKVFTACRKE
Trigger: CTCCTTCCTGCAGGCCGTGAACACCTTCCCGGCCACGGTGGACCACCTGCAGGGCCTGTACGGTCTCAGCGCGGTACAGACCATGCACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000522510.5
ENST00000523368.5
CDS CCA 90 bp ATGTGCATGGTCTGTACCGCGCTGAGACCGTACAGGCCCTGCAGGTaGTCCACCGTGGCCGGGAAGGTGTTCACGGCCTCCCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: MCMVCTALRPYRPCR*STVAGKVFTASRRK
Trigger: CTTTCTGCGGGAGGCCGTGAACACCTTCCCGGCCACGGTGGACCACCTGCAGGGCCTGTACGGTCTCAGCGCGGTACAGACCATGCACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521044.1
CDS-3UTR CAA 90 bp TGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCCCTGGGCTTAGGCGGATCCTCTaGCGTGGCAGCCACCGCCAA +
Preference number: 5 (lower is better)
Translates to: CSKGRAGVSEGLGMRPPGLRRIL*RGSHRQ
Trigger: TTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAAG...CCCAGGGGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS GCA 90 bp CCCTGCGCCGCCGCCATCTCCGTGATGGTGGAGCGGGTGATCTCGTaGACATTGGGATACCCCAGCGTCCAGTGGTTCATGTGCATGGTC +
Preference number: 5 (lower is better)
Translates to: PCAAAISVMVERVIS*TLGYPSVQWFMCMV
Trigger: GACCATGCACATGAACCACTGGACGCTGGGGTATCCCAATGTGCACGAGATCACCCGCTCCACCATCACGGAGATGGCGGCGGCGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000521044.1
ENST00000522510.5
ENST00000523368.5
CDS-3UTR CAA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCGCAGCCACCGCCAAATaGGCAAAGTCAAAACGGGGC +
Preference number: 5 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPAATAK*AKSKRG
Trigger: GCCCCGTTTTGACTTTGCCAATTTGGCGGTGGCTGC...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp TGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCCCTGGGTTTCGCCTGAACACTTaGCCGCACTGCTCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: CSKGRAGVSEGLGMRPPGFRLNT*PHCSQL
Trigger: CAGCTGCGAGCAGTGCGGCAAAGTGTTCAGGCGAAA...CCCAGGGGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS GCA 90 bp CCTGGGCTCAGCTTGCTCAGGTCTCCCATCTTAGGCGGATCCTCTTaGGTGGCAGCCACCGCCAAATTGGCAAAGTCAAAACGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: PGLSLLRSPILGGSS*VAATAKLAKSKRGR
Trigger: CCGGCCCCGTTTTGACTTTGCCAATTTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAAGATGGGAGACCTGAGCAAGCTGAGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000522510.5
ENST00000523368.5
CDS-3UTR CAA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCAGCGAGGCGCACAGCTaGGAAAGGTCATTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPSEAHS*ERSLSP
Trigger: TGGACTCAATGACCTTTCCAAGCTGTGCGCCTCGCT...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp TGCGGCTGCAGCAAGGGAAGAGCTGGGGTCAGTGAAGGGCTAGGGATGCGACCCAGTCCTGGGCTCAGCTaGCTCAGGTCTCCCATCTTA +
Preference number: 5 (lower is better)
Translates to: CGCSKGRAGVSEGLGMRPSPGLS*LRSPIL
Trigger: TAAGATGGGAGACCTGAGCAAGCTGAGCCCAGGACT...GGGTCGCATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS GCA 90 bp GTGATCTCGTGCACATTGGGATACCCCAGCGTCCAGTGGTTCATGTaGATGGTCTGTACCGCGCTGAGACCGTACAGGCCCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VISCTLGYPSVQWFM*MVCTALRPYRPCRW
Trigger: CCACCTGCAGGGCCTGTACGGTCTCAGCGCGGTACAGACCATGCACATGAACCACTGGACGCTGGGGTATCCCAATGTGCACGAGATCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000521044.1
ENST00000522510.5
ENST00000523368.5
CDS GCA 90 bp CTGCTCAAGTCCGCGTGCAGATCAGCCCGGGGCCAGAACAAGAAGTaGTCCACTGGCGAGCGCGTGCCCAAAGGAAAGAAAGTCGGATTC +
Preference number: 5 (lower is better)
Translates to: LLKSACRSARGQNKK*STGERVPKGKKVGF
Trigger: GAATCCGACTTTCTTTCCTTTGGGCACGCGCTCGCCAGTGGAGCACTTCTTGTTCTGGCCCCGGGCTGATCTGCACGCGGACTTGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518199.1
CDS GCA 90 bp ACAACAGCACGTAGAGAAAGCCCTTGGCACCTGCTCAAGTCCGCGTaGAGATCAGCCCGGGGCCAGAACAAGAAGTGCTCCACTGGCGAG +
Preference number: 5 (lower is better)
Translates to: TTARRESPWHLLKSA*RSARGQNKKCSTGE
Trigger: CTCGCCAGTGGAGCACTTCTTGTTCTGGCCCCGGGCTGATCTGCACGCGGACTTGAGCAGGTGCCAAGGGCTTTCTCTACGTGCTGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518199.1
CDS TCA 90 bp AGGGCAACCTTCCTCGAGAGGGCTTTCTGTCCGGAGTCAATTTACTaGGGCCCGAGATGGGGCTACCCAGTCCTGGGCTCAGCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: RATFLERAFCPESIY*GPRWGYPVLGSACS
Trigger: TGAGCAAGCTGAGCCCAGGACTGGGTAGCCCCATCTCGGGCCTCAGTAAATTGACTCCGGACAGAAAGCCCTCTCGAGGAAGGTTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000522510.5
ENST00000523368.5
CDS CCA 90 bp GTCCGCGTGCAGATCAGCCCGGGGCCAGAACAAGAAGTGCTCCACTaGCGAGCGCGTGCCCAAAGGAAAGAAAGTCGGATTCAGACTCTA +
Preference number: 5 (lower is better)
Translates to: VRVQISPGPEQEVLH*RARAQRKESRIQTL
Trigger: TAGAGTCTGAATCCGACTTTCTTTCCTTTGGGCACGCGCTCGCCAGTGGAGCACTTCTTGTTCTGGCCCCGGGCTGATCTGCACGCGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518199.1
CDS GCA 90 bp GATCAGCCCGGGGCCAGAACAAGAAGTGCTCCACTGGCGAGCGCGTaGCCAAAGGAAAGAAAGTCGGATTCAGACTCTAGGCAGATACGG +
Preference number: 5 (lower is better)
Translates to: DQPGARTRSAPLASA*PKERKSDSDSRQIR
Trigger: CCGTATCTGCCTAGAGTCTGAATCCGACTTTCTTTCCTTTGGGCACGCGCTCGCCAGTGGAGCACTTCTTGTTCTGGCCCCGGGCTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518199.1
CDS-3UTR CAA 90 bp GTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGCAATGGCCCCCTGCTaGGGGTGGAATAGGTGGGTG +
Preference number: 5 (lower is better)
Translates to: VKGCSSVWLSTVLSPPEEAMAPC*GWNRWV
Trigger: CACCCACCTATTCCACCCCAAGCAGGGGGCCATTGC...TTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp TGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTTCGGAGCCCACAGCCTaGCAGGGCCATCACCCTCCA +
Preference number: 5 (lower is better)
Translates to: CSSVWLSTVLSPPEEELTSEPTA*QGHHPP
Trigger: TGGAGGGTGATGGCCCTGCAAGGCTGTGGGCTCCGA...AGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp AGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCCTGGAGTCCTGGGCTCAGCTaGCTCAGGTCTCCCATCTTA +
Preference number: 5 (lower is better)
Translates to: SVWLSTVLSPPEEELTPWSPGLS*LRSPIL
Trigger: TAAGATGGGAGACCTGAGCAAGCTGAGCCCAGGACT...CCAGGGAGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp GTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAAGCGAGGCGCACAGCTaGGAAAGGTCATTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: VKGCSSVWLSTVLSPPEESEAHS*ERSLSP
Trigger: TGGACTCAATGACCTTTCCAAGCTGTGCGCCTCGCT...TTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp TCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCTCGGAGCCCACAGCCTaGCAGGGCCATCACCCTCCA +
Preference number: 5 (lower is better)
Translates to: SKCIQQDPKANKTTKQRPSEPTA*QGHHPP
Trigger: TGGAGGGTGATGGCCCTGCAAGGCTGTGGGCTCCGA...GGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp GGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAAGCGAGGCGCACAGCTaGGAAAGGTCATTGAGTCCA +
Preference number: 5 (lower is better)
Translates to: GCSSVWLSTVLSPPEEELSEAHS*ERSLSP
Trigger: TGGACTCAATGACCTTTCCAAGCTGTGCGCCTCGCT...TAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp GATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCCCAGGCCGGGAGTCTaGGGCTTTAGTAGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: DPKANKTTKQRPTTLCTEPRPGV*GFSSGP
Trigger: GGGGCCGCTACTAAAGCCCAAGACTCCCGGCCTGGG...CTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457907.3
CDS-3UTR CAA 90 bp TGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTAGCTTGGAAAGGTCATaGAGTCCACGCCTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: CSSVWLSTVLSPPEEELTSLERS*SPRLAN
Trigger: GTTTGCCAGGCGTGGACTCAATGACCTTTCCAAGCT...AGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp ATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCGGCGCTGGCAGAGCCTaGCTCCCCATTTTCCGGGAT +
Preference number: 5 (lower is better)
Translates to: IPKQTKQQNKDPQHYVQSGAGRA*LPIFRD
Trigger: ATCCCGGAAAATGGGGAGCAAGGCTCTGCCAGCGCC...GCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp CATATACTCTTTGTGAAGGGATGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTGTGATCTCGTGCACATaGGGATACCCCAGCGTCCAG +
Preference number: 5 (lower is better)
Translates to: HILFVKGCSSVWLSTVLSVISCT*GYPSVQ
Trigger: CTGGACGCTGGGGTATCCCAATGTGCACGAGATCAC...ACTGAGAACTGTAGAAAGCCACACACTACTACATCCCTTCACAAAGAGTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp TTCCATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAAGGCGCTGGCAGAGCCTaGCTCCCCATTTTCCGGGAT +
Preference number: 5 (lower is better)
Translates to: FHFPYLSASNKIPKQTKQGAGRA*LPIFRD
Trigger: ATCCCGGAAAATGGGGAGCAAGGCTCTGCCAGCGCC...TTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp CATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAACTTAGGCGGATCCTCTaGCGTGGCAGCCACCGCCAA +
Preference number: 5 (lower is better)
Translates to: HFPYLSASNKIPKQTKQQLRRIL*RGSHRQ
Trigger: TTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAAG...TTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGACTTAGGCGGATCCTCTaGCGTGGCAGCCACCGCCAA +
Preference number: 5 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRLRRIL*RGSHRQ
Trigger: TTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAAG...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp TGTAGTAGTGTGTGGCTTTCTACAGTTCTCAGTCCCCCAGAAGAAGAGTTAACTCCACATGTGGGACATTaGTGTGGAGATTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: CSSVWLSTVLSPPEEELTPHVGH*CGDSCM
Trigger: CATGCAGGAATCTCCACACAAATGTCCCACATGTGG...AGTTAACTCTTCTTCTGGGGGACTGAGAACTGTAGAAAGCCACACACTACTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297565.8
ENST00000457907.3
CDS-3UTR CAA 90 bp GATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGGTGATCTCGTGCACATaGGGATACCCCAGCGTCCAG +
Preference number: 5 (lower is better)
Translates to: DPKANKTTKQRPTTLCTEVISCT*GYPSVQ
Trigger: CTGGACGCTGGGGTATCCCAATGTGCACGAGATCAC...CTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp GATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGTTTCGCCTGAACACTTaGCCGCACTGCTCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: DPKANKTTKQRPTTLCTEFRLNT*PHCSQL
Trigger: CAGCTGCGAGCAGTGCGGCAAAGTGTTCAGGCGAAA...CTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp CCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCTCTTTTCGCCTGAACACTTaGCCGCACTGCTCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PKQTKQQNKDPQHYVQSSFRLNT*PHCSQL
Trigger: CAGCTGCGAGCAGTGCGGCAAAGTGTTCAGGCGAAA...AGAGCTCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp AAGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGGTGATCTCGTGCACATaGGGATACCCCAGCGTCCAG +
Preference number: 5 (lower is better)
Translates to: KIPKQTKQQNKDPQHYVQVISCT*GYPSVQ
Trigger: CTGGACGCTGGGGTATCCCAATGTGCACGAGATCAC...CTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGAGCAGCCACCGCCAAATaGGCAAAGTCAAAACGGGGC +
Preference number: 5 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRAATAK*AKSKRG
Trigger: GCCCCGTTTTGACTTTGCCAATTTGGCGGTGGCTGC...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp CATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAACAAGCAGCCACCGCCAAATaGGCAAAGTCAAAACGGGGC +
Preference number: 5 (lower is better)
Translates to: HFPYLSASNKIPKQTKQQAATAK*AKSKRG
Trigger: GCCCCGTTTTGACTTTGCCAATTTGGCGGTGGCTGC...TTGTTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp TTCCATTTTCCATATCTAAGTGCATCCAACAAGATCCCAAAGCAAACAAAACAAAGTCCTGGGCTCAGCTaGCTCAGGTCTCCCATCTTA +
Preference number: 5 (lower is better)
Translates to: FHFPYLSASNKIPKQTKQSPGLS*LRSPIL
Trigger: TAAGATGGGAGACCTGAGCAAGCTGAGCCCAGGACT...TTGTTTTGTTTGCTTTGGGATCTTGTTGGATGCACTTAGATATGGAAAATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
CDS-3UTR CAA 90 bp AGATCCCAAAGCAAACAAAACAACAAAACAAAGACCCACAACATTATGTACAGACCACATGTGGGACATTaGTGTGGAGATTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: RSQSKQNNKTKTHNIMYRPHVGH*CGDSCM
Trigger: CATGCAGGAATCTCCACACAAATGTCCCACATGTGG...TCTGTACATAATGTTGTGGGTCTTTGTTTTGTTGTTTTGTTTGCTTTGGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297565.8
ENST00000457907.3
CDS CCA 90 bp GATCATCATCTGCTGTCATTTCTCCACCGTCCCGTTTCAGACCACTaGTTACTTTTAATCTTGCAAGGAAAGAAACTTAAACCAATGAAA +
Preference number: 5 (lower is better)
Translates to: DHHLLSFLHRPVSDH*LLLILQGKKLKPMK
Trigger: TTTCATTGGTTTAAGTTTCTTTCCTTGCAAGATTAAAAGTAACCAGTGGTCTGAAACGGGACGGTGGAGAAATGACAGCAGATGATGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520791.5
CDS CCA 72 bp GGCGTGCAAGAGCGAAGCCGGCGCGCTTCATCCTCCTaGGCCAGAGGGCCCTGGGAGGGGCTCACCTCGCCC +
Preference number: 6 (lower is better)
Translates to: GVQERSRRASSS*ARGPWEGLTSP
Trigger: GGGCGAGGTGAGCCCCTCCCAGGGCCCTCTGGCCCAGGAGGATGAAGCGCGCCGGCTTCGCTCTTGCACGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000457907.3
ENST00000520951.1
ENST00000522510.5
CDS CCA 72 bp CGCGCCCTGTGGCCGCCTTTCCCGCGCTTACCCGGATaGCAAGCCGGCGTGCAAGAGCGAAGCCGGCGCGCT +
Preference number: 6 (lower is better)
Translates to: RALWPPFPRLPG*QAGVQERSRRA
Trigger: AGCGCGCCGGCTTCGCTCTTGCACGCCGGCTTGCCATCCGGGTAAGCGCGGGAAAGGCGGCCACAGGGCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS CCA 72 bp GTGAGATCCCACGCGCTGCGCTGCCGCCGCGCCCTGTaGCCGCCTTTCCCGCGCTTACCCGGATGGCAAGCC +
Preference number: 6 (lower is better)
Translates to: VRSHALRCRRAL*PPFPRLPGWQA
Trigger: GGCTTGCCATCCGGGTAAGCGCGGGAAAGGCGGCCACAGGGCGCGGCGGCAGCGCAGCGCGTGGGATCTCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS CCA 72 bp GCGCCTCGGAGCTCCTGGGAACGGTGGGTTAACGGATaGGTCGTGAGATCCCACGCGCTGCGCTGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: APRSSWERWVNG*VVRSHALRCRR
Trigger: GCGGCGGCAGCGCAGCGCGTGGGATCTCACGACCCATCCGTTAACCCACCGTTCCCAGGAGCTCCGAGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS TCA 72 bp GGAGCTCCTGGGAACGGTGGGTTAACGGATGGGTCGTaGGATCCCACGCGCTGCGCTGCCGCCGCGCCCTGT +
Preference number: 6 (lower is better)
Translates to: GAPGNGGLTDGS*DPTRCAAAAPC
Trigger: ACAGGGCGCGGCGGCAGCGCAGCGCGTGGGATCTCACGACCCATCCGTTAACCCACCGTTCCCAGGAGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS GCA 72 bp CGCCTTTCCCGCGCTTACCCGGATGGCAAGCCGGCGTaGAAGAGCGAAGCCGGCGCGCTTCATCCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: RLSRAYPDGKPA*KSEAGALHPPG
Trigger: CCCAGGAGGATGAAGCGCGCCGGCTTCGCTCTTGCACGCCGGCTTGCCATCCGGGTAAGCGCGGGAAAGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS GCA 72 bp GTTAACGGATGGGTCGTGAGATCCCACGCGCTGCGCTaGCGCCGCGCCCTGTGGCCGCCTTTCCCGCGCTTA +
Preference number: 6 (lower is better)
Translates to: VNGWVVRSHALR*RRALWPPFPRL
Trigger: TAAGCGCGGGAAAGGCGGCCACAGGGCGCGGCGGCAGCGCAGCGCGTGGGATCTCACGACCCATCCGTTAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS CAA 72 bp CGCTGTCGACTCCCGGTGAGGTCGGAGCCCACAGCCTaGCAGGGCCATCACCCTCCAGCAGCAAGCACGCCG +
Preference number: 6 (lower is better)
Translates to: RCRLPVRSEPTA*QGHHPPAASTP
Trigger: CGGCGTGCTTGCTGCTGGAGGGTGATGGCCCTGCAAGGCTGTGGGCTCCGACCTCACCGGGAGTCGACAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000520722.1
ENST00000520791.5
ENST00000521044.1
ENST00000523368.5
CDS CAA 90 bp CGAACCTCTCGCTGTCGACTCCCGGTGAGGTCGGAGCCCACAGCCTaGCAGGGCCATCACCCTCCAGCAGCAAGCACGCCGAGCTCCGTC +
Preference number: 6 (lower is better)
Translates to: RTSRCRLPVRSEPTA*QGHHPPAASTPSSV
Trigger: GACGGAGCTCGGCGTGCTTGCTGCTGGAGGGTGATGGCCCTGCAAGGCTGTGGGCTCCGACCTCACCGGGAGTCGACAGCGAGAGGTTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000520722.1
ENST00000520791.5
ENST00000521044.1
ENST00000523368.5
CDS CAA 72 bp GTCTGTGGACGCGGACTGTGTAAAGACCCGGGGTGCTaGGGGCCGGCGTTCAGCGCTCGCCCAGAACCTCGC +
Preference number: 6 (lower is better)
Translates to: VCGRGLCKDPGC*GPAFSARPEPR
Trigger: GCGAGGTTCTGGGCGAGCGCTGAACGCCGGCCCCAAGCACCCCGGGTCTTTACACAGTCCGCGTCCACAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000520722.1
ENST00000520791.5
ENST00000521044.1
ENST00000523368.5
CDS TCA 72 bp TCGCTCTTCGGCGAACCTCTCGCTGTCGACTCCCGGTaGGGTCGGAGCCCACAGCCTTGCAGGGCCATCACC +
Preference number: 6 (lower is better)
Translates to: SLFGEPLAVDSR*GRSPQPCRAIT
Trigger: GGTGATGGCCCTGCAAGGCTGTGGGCTCCGACCTCACCGGGAGTCGACAGCGAGAGGTTCGCCGAAGAGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000520722.1
ENST00000520791.5
ENST00000521044.1
ENST00000523368.5
CDS GCA 72 bp CAGCACGTAGAGAAAGCCCCGGATGGCAAGCCGGCGTaGAAGAGCGAAGCCGGCGCGCTTCATCCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: QHVEKAPDGKPA*KSEAGALHPPG
Trigger: CCCAGGAGGATGAAGCGCGCCGGCTTCGCTCTTGCACGCCGGCTTGCCATCCGGGGCTTTCTCTACGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520951.1
CDS CCA 72 bp TCTGTGGACGCGGACTGTGTAAAGACCCGGGGTGCTTaGGGCCGGCGTTCAGCGCTCGCCCAGAACCTCGCT +
Preference number: 6 (lower is better)
Translates to: SVDADCVKTRGA*GRRSALAQNLA
Trigger: AGCGAGGTTCTGGGCGAGCGCTGAACGCCGGCCCCAAGCACCCCGGGTCTTTACACAGTCCGCGTCCACAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000520722.1
ENST00000520791.5
ENST00000521044.1
ENST00000523368.5
CDS CCA 72 bp TCTGTCGCCGCTGCGCCTCGGAGCTCCTGGGAACGGTaGGTTAACGGATGGGTCGTGAGATCCCACGCGCTG +
Preference number: 6 (lower is better)
Translates to: SVAAAPRSSWER*VNGWVVRSHAL
Trigger: CAGCGCGTGGGATCTCACGACCCATCCGTTAACCCACCGTTCCCAGGAGCTCCGAGGCGCAGCGGCGACAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS CAA 90 bp TTCGTCAGAGTCTGTGGACGCGGACTGTGTAAAGACCCGGGGTGCTaGGGGCCGGCGTTCAGCGCTCGCCCAGAACCTCGCTCTTCGGCG +
Preference number: 6 (lower is better)
Translates to: FVRVCGRGLCKDPGC*GPAFSARPEPRSSA
Trigger: CGCCGAAGAGCGAGGTTCTGGGCGAGCGCTGAACGCCGGCCCCAAGCACCCCGGGTCTTTACACAGTCCGCGTCCACAGACTCTGACGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000520722.1
ENST00000520791.5
ENST00000521044.1
ENST00000523368.5
CDS GCA 72 bp AGAGTCTGTGGACGCGGACTGTGTAAAGACCCGGGGTaGTTGGGGCCGGCGTTCAGCGCTCGCCCAGAACCT +
Preference number: 6 (lower is better)
Translates to: RVCGRGLCKDPG*LGPAFSARPEP
Trigger: AGGTTCTGGGCGAGCGCTGAACGCCGGCCCCAAGCACCCCGGGTCTTTACACAGTCCGCGTCCACAGACTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000520722.1
ENST00000520791.5
ENST00000521044.1
ENST00000523368.5
CDS GCA 72 bp TGCATGGTCTGTACCGCGCTGAGACCGTACAGGCCCTaGAGGTGGTCCACCGTGGCCGGGAAGGTGTTCACG +
Preference number: 6 (lower is better)
Translates to: CMVCTALRPYRP*RWSTVAGKVFT
Trigger: CGTGAACACCTTCCCGGCCACGGTGGACCACCTGCAGGGCCTGTACGGTCTCAGCGCGGTACAGACCATGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000521044.1
ENST00000522510.5
ENST00000523368.5
CDS TCA 72 bp GCGTCCAGTGGTTCATGTGCATGGTCTGTACCGCGCTaGGACCGTACAGGCCCTGCAGGTGGTCCACCGTGG +
Preference number: 6 (lower is better)
Translates to: ASSGSCAWSVPR*DRTGPAGGPPW
Trigger: CCACGGTGGACCACCTGCAGGGCCTGTACGGTCTCAGCGCGGTACAGACCATGCACATGAACCACTGGACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000521044.1
ENST00000522510.5
ENST00000523368.5
CDS CCA 72 bp AGAAAGCCCTCTGTCGCCGCTGCGCCTCGGAGCTCCTaGGAACGGTGGGTTAACGGATGGGTCGTGAGATCC +
Preference number: 6 (lower is better)
Translates to: RKPSVAAAPRSS*ERWVNGWVVRS
Trigger: GGATCTCACGACCCATCCGTTAACCCACCGTTCCCAGGAGCTCCGAGGCGCAGCGGCGACAGAGGGCTTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457907.3
ENST00000522510.5
CDS CAA 72 bp AGGCCCGAGATGGGGCTACCCAGTCCTGGGCTCAGCTaGCTCAGGTCTCCCATCTTAGGCGGATCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: RPEMGLPSPGLS*LRSPILGGSSC
Trigger: GCAAGAGGATCCGCCTAAGATGGGAGACCTGAGCAAGCTGAGCCCAGGACTGGGTAGCCCCATCTCGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000522510.5
ENST00000523368.5
CDS CAA 90 bp GCCGCCGCCATCTCCGTGATGGTGGAGCGGGTGATCTCGTGCACATaGGGATACCCCAGCGTCCAGTGGTTCATGTGCATGGTCTGTACC +
Preference number: 6 (lower is better)
Translates to: AAAISVMVERVISCT*GYPSVQWFMCMVCT
Trigger: GGTACAGACCATGCACATGAACCACTGGACGCTGGGGTATCCCAATGTGCACGAGATCACCCGCTCCACCATCACGGAGATGGCGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000521044.1
ENST00000522510.5
ENST00000523368.5
CDS CAA 90 bp TCTCCCATCTTAGGCGGATCCTCTTGCGTGGCAGCCACCGCCAAATaGGCAAAGTCAAAACGGGGCCGGTCCTTGTGCAGGGCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: SPILGGSSCVAATAK*AKSKRGRSLCRAGR
Trigger: CCTCCCAGCCCTGCACAAGGACCGGCCCCGTTTTGACTTTGCCAATTTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAAGATGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000522510.5
ENST00000523368.5
CDS GCA 72 bp GCCGCCATCTCCGTGATGGTGGAGCGGGTGATCTCGTaGACATTGGGATACCCCAGCGTCCAGTGGTTCATG +
Preference number: 6 (lower is better)
Translates to: AAISVMVERVIS*TLGYPSVQWFM
Trigger: CATGAACCACTGGACGCTGGGGTATCCCAATGTGCACGAGATCACCCGCTCCACCATCACGGAGATGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000521044.1
ENST00000522510.5
ENST00000523368.5
CDS CAA 72 bp GCGCTCAGACCCGGTCCAGGCAGCGAGGCGCACAGCTaGGAAAGGTCATTGAGTCCACGCCTGGCAAACTTT +
Preference number: 6 (lower is better)
Translates to: ALRPGPGSEAHS*ERSLSPRLANF
Trigger: AAAGTTTGCCAGGCGTGGACTCAATGACCTTTCCAAGCTGTGCGCCTCGCTGCCTGGACCGGGTCTGAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000520722.1
ENST00000520791.5
ENST00000521044.1
ENST00000522510.5
ENST00000523368.5
CDS CAA 90 bp TCCTGGGCTCAGCTTGCTCAGGTCTCCCATCTTAGGCGGATCCTCTaGCGTGGCAGCCACCGCCAAATTGGCAAAGTCAAAACGGGGCCG +
Preference number: 6 (lower is better)
Translates to: SWAQLAQVSHLRRIL*RGSHRQIGKVKTGP
Trigger: CGGCCCCGTTTTGACTTTGCCAATTTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAAGATGGGAGACCTGAGCAAGCTGAGCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000522510.5
ENST00000523368.5
CDS CAA 90 bp AATTTACTGAGGCCCGAGATGGGGCTACCCAGTCCTGGGCTCAGCTaGCTCAGGTCTCCCATCTTAGGCGGATCCTCTTGCGTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: NLLRPEMGLPSPGLS*LRSPILGGSSCVAA
Trigger: GGCTGCCACGCAAGAGGATCCGCCTAAGATGGGAGACCTGAGCAAGCTGAGCCCAGGACTGGGTAGCCCCATCTCGGGCCTCAGTAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000522510.5
ENST00000523368.5
CDS CAA 72 bp TTAGGCGGATCCTCTTGCGTGGCAGCCACCGCCAAATaGGCAAAGTCAAAACGGGGCCGGTCCTTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: LGGSSCVAATAK*AKSKRGRSLCR
Trigger: CCTGCACAAGGACCGGCCCCGTTTTGACTTTGCCAATTTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000522510.5
ENST00000523368.5
CDS CCA 72 bp CAACCCTTTCTTCCAGGAATCAGAGGCCGGAGGGCGTaGGGCTCCGACAAAAACCCAGTGAGACAACAGCAC +
Preference number: 6 (lower is better)
Translates to: QPFLPGIRGRRA*GSDKNPVRQQH
Trigger: GTGCTGTTGTCTCACTGGGTTTTTGTCGGAGCCCCACGCCCTCCGGCCTCTGATTCCTGGAAGAAAGGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000522510.5
ENST00000523368.5
CDS CCA 72 bp GTGATCTCGTGCACATTGGGATACCCCAGCGTCCAGTaGTTCATGTGCATGGTCTGTACCGCGCTGAGACCG +
Preference number: 6 (lower is better)
Translates to: VISCTLGYPSVQ*FMCMVCTALRP
Trigger: CGGTCTCAGCGCGGTACAGACCATGCACATGAACCACTGGACGCTGGGGTATCCCAATGTGCACGAGATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000521044.1
ENST00000522510.5
ENST00000523368.5
CDS GCA 72 bp GGGGCCAGAACAAGAAGTGCTCCACTGGCGAGCGCGTaGCCAAAGGAAAGAAAGTCGGATTCAGACTCTAGG +
Preference number: 6 (lower is better)
Translates to: GARTRSAPLASA*PKERKSDSDSR
Trigger: CCTAGAGTCTGAATCCGACTTTCTTTCCTTTGGGCACGCGCTCGCCAGTGGAGCACTTCTTGTTCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518199.1
CDS CAA 72 bp ATCTCCGTGATGGTGGAGCGGGTGATCTCGTGCACATaGGGATACCCCAGCGTCCAGTGGTTCATGTGCATG +
Preference number: 6 (lower is better)
Translates to: ISVMVERVISCT*GYPSVQWFMCM
Trigger: CATGCACATGAACCACTGGACGCTGGGGTATCCCAATGTGCACGAGATCACCCGCTCCACCATCACGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000521044.1
ENST00000522510.5
ENST00000523368.5
CDS CAA 72 bp CAGCTTGCTCAGGTCTCCCATCTTAGGCGGATCCTCTaGCGTGGCAGCCACCGCCAAATTGGCAAAGTCAAA +
Preference number: 6 (lower is better)
Translates to: QLAQVSHLRRIL*RGSHRQIGKVK
Trigger: TTTGACTTTGCCAATTTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAAGATGGGAGACCTGAGCAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000522510.5
ENST00000523368.5
CDS GCA 72 bp AGCTTGCTCAGGTCTCCCATCTTAGGCGGATCCTCTTaGGTGGCAGCCACCGCCAAATTGGCAAAGTCAAAA +
Preference number: 6 (lower is better)
Translates to: SLLRSPILGGSS*VAATAKLAKSK
Trigger: TTTTGACTTTGCCAATTTGGCGGTGGCTGCCACGCAAGAGGATCCGCCTAAGATGGGAGACCTGAGCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297565.8
ENST00000435298.6
ENST00000457907.3
ENST00000518199.1
ENST00000520951.1
ENST00000522510.5
ENST00000523368.5
CDS GCA 72 bp CACACTCCCTTTCAGGAAATAACAGCGATCATCATCTaGTGTCATTTCTCCACCGTCCCGTTTCAGACCACT +
Preference number: 6 (lower is better)
Translates to: HTPFQEITAIII*CHFSTVPFQTT
Trigger: AGTGGTCTGAAACGGGACGGTGGAGAAATGACAGCAGATGATGATCGCTGTTATTTCCTGAAAGGGAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520791.5
CDS GCA 72 bp CCTTTTAAGAGAAAGAGTCTGCCATTGAACACCTTTTaGAAAGCAGTAATGATAACACGAACCAGCCACTGT +
Preference number: 6 (lower is better)
Translates to: PFKRKSLPLNTF*KAVMITRTSHC
Trigger: ACAGTGGCTGGTTCGTGTTATCATTACTGCTTTGCAAAAGGTGTTCAATGGCAGACTCTTTCTCTTAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523368.5
CDS CCA 72 bp CTGCTGTCATTTCTCCACCGTCCCGTTTCAGACCACTaGTTACTTTTAATCTTGCAAGGAAAGAAACTTAAA +
Preference number: 6 (lower is better)
Translates to: LLSFLHRPVSDH*LLLILQGKKLK
Trigger: TTTAAGTTTCTTTCCTTGCAAGATTAAAAGTAACCAGTGGTCTGAAACGGGACGGTGGAGAAATGACAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520791.5
CDS CAA 72 bp ATTTCCAGGCATGTGGAGAAATTTTGTAAAATTTACTaGACTGGCTGTCACCAAGGAAGATGTGTACACACT +
Preference number: 6 (lower is better)
Translates to: ISRHVEKFCKIY*TGCHQGRCVHT
Trigger: AGTGTGTACACATCTTCCTTGGTGACAGCCAGTCAAGTAAATTTTACAAAATTTCTCCACATGCCTGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520791.5
CDS CAA 72 bp CACCGTCCCGTTTCAGACCACTGGTTACTTTTAATCTaGCAAGGAAAGAAACTTAAACCAATGAAAAGTCAT +
Preference number: 6 (lower is better)
Translates to: HRPVSDHWLLLI*QGKKLKPMKSH
Trigger: ATGACTTTTCATTGGTTTAAGTTTCTTTCCTTGCAAGATTAAAAGTAACCAGTGGTCTGAAACGGGACGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520791.5
CDS CAA 90 bp TTCACAGGAATTTCCAGGCATGTGGAGAAATTTTGTAAAATTTACTaGACTGGCTGTCACCAAGGAAGATGTGTACACACTTATTTCAGT +
Preference number: 6 (lower is better)
Translates to: FTGISRHVEKFCKIY*TGCHQGRCVHTYFS
Trigger: ACTGAAATAAGTGTGTACACATCTTCCTTGGTGACAGCCAGTCAAGTAAATTTTACAAAATTTCTCCACATGCCTGGAAATTCCTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520791.5
CDS CAA 90 bp TCATTTCTCCACCGTCCCGTTTCAGACCACTGGTTACTTTTAATCTaGCAAGGAAAGAAACTTAAACCAATGAAAAGTCATAAATATGTT +
Preference number: 6 (lower is better)
Translates to: SFLHRPVSDHWLLLI*QGKKLKPMKSHKYV
Trigger: AACATATTTATGACTTTTCATTGGTTTAAGTTTCTTTCCTTGCAAGATTAAAAGTAACCAGTGGTCTGAAACGGGACGGTGGAGAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520791.5