RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR6Y1 (Homo sapiens)

Ensembl gene IDs: ENSG00000197532

Ensembl transcript IDs: ENST00000641282.1, ENST00000641622.1

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTaGACATTGTCTTTCCTCTGTGTGTGTCTGTGTCCAAATTTTTCC +
Preference number: 1 (lower is better)
Translates to: RCITAETWLLSALCV*TLSFLCVCLCPNFS
Trigger: GGAAAAATTTGGACACAGACACACACAGAGGAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR CCA 90 bp AGCAATACTTCTTCCTTAGCTTATAGATGCATTACTGCAGAAACATaGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCCTCTGT +
Preference number: 1 (lower is better)
Translates to: SNTSSLAYRCITAET*LLSALCVCTLSFLC
Trigger: ACAGAGGAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATCTATAAGCTAAGGAAGAAGTATTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR CAA 90 bp AGTCATTTATGTTATTTGGAGGGAAGTGGGTGGGGACTCCCTATGTaGACCAGGCTGGGCCCAAGTTCCTGGACTCAGGGGATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: SHLCYLEGSGWGLPM*TRLGPSSWTQGILL
Trigger: CAGGAGGATCCCCTGAGTCCAGGAACTTGGGCCCAGCCTGGTCAACATAGGGAGTCCCCACCCACTTCCCTCCAAATAACATAAATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTGGGGACTCCCTATGTTaGCCAGGCTGGGCCCAAGTT +
Preference number: 2 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCGDSLC*PGWAQV
Trigger: AACTTGGGCCCAGCCTGGTCAACATAGGGAGTCCCC...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCGGGGACTCCCTATGTTaGCCAGGCTGGGCCCAAGTT +
Preference number: 2 (lower is better)
Translates to: ITAETWLLSALCVCTLSFGDSLC*PGWAQV
Trigger: AACTTGGGCCCAGCCTGGTCAACATAGGGAGTCCCC...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCCTGCCTCAGTCTCTTaGGTAGCTGGGACTACAGGT +
Preference number: 2 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCPASVS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAAGAGACTGAGGCAGG...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTTTGGAGGGAAGTGGGTaGGGACTCCCTATGTTGACC +
Preference number: 2 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCLEGSG*GLPMLT
Trigger: GGTCAACATAGGGAGTCCCCACCCACTTCCCTCCAA...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACACTTGTCTCTCAGCCTaGTACCAGAGGTTACTTCTT +
Preference number: 2 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYTCLSA*YQRLLL
Trigger: AAGAAGTAACCTCTGGTATCAGGCTGAGAGACAAGT...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTCCTGCCTCAGTCTCTTaGGTAGCTGGGACTACAGGT +
Preference number: 2 (lower is better)
Translates to: ILGITNKVLGRAILSLSLPASVS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAAGAGACTGAGGCAGG...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACGTCATTTATGTTATTTaGAGGGAAGTGGGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYVIYVI*REVGGD
Trigger: GTCCCCACCCACTTCCCTCCAAATAACATAAATGAC...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACATTACTGCAGAAACATaGTTGCTCTCTGCCCTGTGT +
Preference number: 2 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYITAET*LLSALC
Trigger: ACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACGCTGCTTCTAGCTTCTaGTGTTTGCCAGCAATACTT +
Preference number: 2 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYAASSF*CLPAIL
Trigger: AAGTATTGCTGGCAAACACCAGAAGCTAGAAGCAGC...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCCTTTTCTAACCATCTaGGAGATGAACGATGGTTTT +
Preference number: 2 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCPFLTI*EMNDGF
Trigger: AAAACCATCGTTCATCTCTCAGATGGTTAGAAAAGG...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCTACAGTACTGGAGATTaGGGGATAACCAAAGACAAG +
Preference number: 2 (lower is better)
Translates to: ITAETWLLSALCVCTLSFYSTGD*GITKDK
Trigger: CTTGTCTTTGGTTATCCCCCAATCTCCAGTACTGTA...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR CAA 90 bp AATACTTCTTCCTTAGCTTATAGATGCATTACTGCAGAAACATGGTaGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCCTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: NTSSLAYRCITAETW*LSALCVCTLSFLCV
Trigger: CACACAGAGGAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATCTATAAGCTAAGGAAGAAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCACCAGAGGTTACTTCTTaGGAACATGTTTCTCCAGTC +
Preference number: 2 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAPEVTS*EHVSPV
Trigger: GACTGGAGAAACATGTTCTCAAGAAGTAACCTCTGG...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR GCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACTCCTTAGCTTATAGATaGATTACTGCAGAAACATGG +
Preference number: 2 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYSLAYR*ITAETW
Trigger: CCATGTTTCTGCAGTAATGCATCTATAAGCTAAGGA...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR GCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACTCTGTTCACATCCTTTaGCCACTTTTAAATGGAGTT +
Preference number: 2 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYSVHIL*PLLNGV
Trigger: AACTCCATTTAAAAGTGGGCAAAGGATGTGAACAGA...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAGCAGTGTTACAGTACTaGAGATTGGGGGATAACCAA +
Preference number: 2 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAAVLQY*RLGDNQ
Trigger: TTGGTTATCCCCCAATCTCCAGTACTGTAACACTGC...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTCCAGAGGTTACTTCTTaGGAACATGTTTCTCCAGTC +
Preference number: 2 (lower is better)
Translates to: ILGITNKVLGRAILSLSLPEVTS*EHVSPV
Trigger: GACTGGAGAAACATGTTCTCAAGAAGTAACCTCTGG...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTACTTGTCTCTCAGCCTaGTACCAGAGGTTACTTCTT +
Preference number: 2 (lower is better)
Translates to: ILGITNKVLGRAILSLSLTCLSA*YQRLLL
Trigger: AAGAAGTAACCTCTGGTATCAGGCTGAGAGACAAGT...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR GCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGAACATGGTTGCTCTCTaGCCTGTGTGTGTGCACATT +
Preference number: 2 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWNMVAL*PVCVHI
Trigger: AATGTGCACACACACAGGGCAGAGAGCAACCATGTT...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTGTCATTTATGTTATTTaGAGGGAAGTGGGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPVIYVI*REVGGD
Trigger: GTCCCCACCCACTTCCCTCCAAATAACATAAATGAC...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCACCCTACTTTCAAATATaGTCACATTCTGAGAGACTG +
Preference number: 2 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAPYFQI*SHSERL
Trigger: CAGTCTCTCAGAATGTGACCATATTTGAAAGTAGGG...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTGCTGCTTCTAGCTTCTaGTGTTTGCCAGCAATACTT +
Preference number: 2 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPAASSF*CLPAIL
Trigger: AAGTATTGCTGGCAAACACCAGAAGCTAGAAGCAGC...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTCCTTTTCTAACCATCTaGGAGATGAACGATGGTTTT +
Preference number: 2 (lower is better)
Translates to: ILGITNKVLGRAILSLSLPFLTI*EMNDGF
Trigger: AAAACCATCGTTCATCTCTCAGATGGTTAGAAAAGG...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTCCCTACTTTCAAATATaGTCACATTCTGAGAGACTG +
Preference number: 2 (lower is better)
Translates to: ILGITNKVLGRAILSLSLPYFQI*SHSERL
Trigger: CAGTCTCTCAGAATGTGACCATATTTGAAAGTAGGG...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGATTACTGCAGAAACATaGTTGCTCTCTGCCCTGTGT +
Preference number: 2 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWITAET*LLSALC
Trigger: ACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTCTCTCAGTTCAAGCCTaGAAGGAATCTATACATTTT +
Preference number: 2 (lower is better)
Translates to: ILGITNKVLGRAILSLSLLSVQA*KESIHF
Trigger: AAAATGTATAGATTCCTTTCAGGCTTGAACTGAGAG...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTATGTTTCTCCAGTCATaGTTGTGTATACACACACAC +
Preference number: 2 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPMFLQS*LCIHTH
Trigger: GTGTGTGTGTATACACAATCATGACTGGAGAAACAT...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR GCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTAGGTATGTGCCACTGTaGCTAACAGGCATTAATTTA +
Preference number: 2 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPRYVPL*LTGINL
Trigger: TAAATTAATGCCTGTTAGGCACAGTGGCACATACCT...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCACCTTTGTCAGTTGTATaGTTTGCCAAAAATGTTTTC +
Preference number: 2 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAPLSVV*FAKNVF
Trigger: GAAAACATTTTTGGCAAACCATACAACTGACAAAGG...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR CAA 90 bp AACATTTTAAAACTTGTCTCTCAGCCTGATACCAGAGGTTACTTCTaGAGAACATGTTTCTCCAGTCATGATTGTGTATACACACACACA +
Preference number: 2 (lower is better)
Translates to: NILKLVSQPDTRGYF*RTCFSSHDCVYTHT
Trigger: TGTGTGTGTGTATACACAATCATGACTGGAGAAACATGTTCTCAAGAAGTAACCTCTGGTATCAGGCTGAGAGACAAGTTTTAAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTCTGTTTTTAAGTCTTTaGGGAATCGTTACACTGTCT +
Preference number: 2 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPLFLSL*GIVTLS
Trigger: AGACAGTGTAACGATTCCTCAAAGACTTAAAAACAG...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR GCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTGTTGATAATTTCTTTTaGTGTGCAGAAGCTTGTCAG +
Preference number: 2 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPVDNFF*CAEACQ
Trigger: CTGACAAGCTTCTGCACAGCAAAAGAAATTATCAAC...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR TCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGCTCTCAGTTCAAGCCTaGAAGGAATCTATACATTTT +
Preference number: 2 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWLSVQA*KESIHF
Trigger: AAAATGTATAGATTCCTTTCAGGCTTGAACTGAGAG...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTCCTTTGTCAGTTGTATaGTTTGCCAAAAATGTTTTC +
Preference number: 2 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPPLSVV*FAKNVF
Trigger: GAAAACATTTTTGGCAAACCATACAACTGACAAAGG...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCATGGGGACTCCCTATGTaGACCAGGCTGGGCCCAAGT +
Preference number: 3 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAWGLPM*TRLGPS
Trigger: ACTTGGGCCCAGCCTGGTCAACATAGGGAGTCCCCA...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR CCA 72 bp ACACACAGAGGAGAGCAGTGTTACAGTACTGGAGATTaGGGGATAACCAAAGACAAGACTGAGGGGGAAAGT +
Preference number: 3 (lower is better)
Translates to: THRGEQCYSTGD*GITKDKTEGES
Trigger: ACTTTCCCCCTCAGTCTTGTCTTTGGTTATCCCCCAATCTCCAGTACTGTAACACTGCTCTCCTCTGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR CCA 72 bp CAAATTAGTCATTTATGTTATTTGGAGGGAAGTGGGTaGGGACTCCCTATGTTGACCAGGCTGGGCCCAAGT +
Preference number: 3 (lower is better)
Translates to: QISHLCYLEGSG*GLPMLTRLGPS
Trigger: ACTTGGGCCCAGCCTGGTCAACATAGGGAGTCCCCACCCACTTCCCTCCAAATAACATAAATGACTAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACAGTCATTTATGTTATTaGGAGGGAAGTGGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYSHLCY*EGSGWG
Trigger: TCCCCACCCACTTCCCTCCAAATAACATAAATGACT...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAGGACAACATACTTTTTaGGAGGGAGGGAGGAGTGGG +
Preference number: 3 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAGQHTF*EGGRSG
Trigger: CCCACTCCTCCCTCCCTCCAAAAAAGTATGTTGTCC...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACTTACAGTACTGGAGATaGGGGGATAACCAAAGACAA +
Preference number: 3 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYLQYWR*GDNQRQ
Trigger: TTGTCTTTGGTTATCCCCCAATCTCCAGTACTGTAA...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTGGACAACATACTTTTTaGGAGGGAGGGAGGAGTGGG +
Preference number: 3 (lower is better)
Translates to: ILGITNKVLGRAILSLSLGQHTF*EGGRSG
Trigger: CCCACTCCTCCCTCCCTCCAAAAAAGTATGTTGTCC...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTACTGCAGAAACATGGTaGCTCTCTGCCCTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPTAETW*LSALCV
Trigger: CACACACAGGGCAGAGAGCAACCATGTTTCTGCAGT...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACCTGAATATTAGACCTTaGTCAGTTGTATGGTTTGCC +
Preference number: 3 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYLNIRP*SVVWFA
Trigger: GGCAAACCATACAACTGACAAAGGTCTAATATTCAG...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACTTATCCAGTCTATTATaGATGGGCATTGTGGTTGGT +
Preference number: 3 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYLSSLL*MGIVVG
Trigger: ACCAACCACAATGCCCATCAATAATAGACTGGATAA...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR CCA 72 bp TCTTCCTTAGCTTATAGATGCATTACTGCAGAAACATaGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCT +
Preference number: 3 (lower is better)
Translates to: SSLAYRCITAET*LLSALCVCTLS
Trigger: AGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATCTATAAGCTAAGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR CCA 72 bp GACGTTACTTCACACCAGTTAGAATGGCTATTATTATaGACACAGGAACATCACACTCCGGGGAATGTTGTG +
Preference number: 3 (lower is better)
Translates to: DVTSHQLEWLLL*TQEHHTPGNVV
Trigger: CACAACATTCCCCGGAGTGTGATGTTCCTGTGTCCATAATAATAGCCATTCTAACTGGTGTGAAGTAACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACTCTGTTTTTAAGTCTTaGAGGAATCGTTACACTGTC +
Preference number: 3 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYSVFKS*RNRYTV
Trigger: GACAGTGTAACGATTCCTCAAAGACTTAAAAACAGA...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR TCA 72 bp CAGAGGTTACTTCTTGAGAACATGTTTCTCCAGTCATaGTTGTGTATACACACACACACACATGCACACACA +
Preference number: 3 (lower is better)
Translates to: QRLLLENMFLQS*LCIHTHTHAHT
Trigger: TGTGTGTGCATGTGTGTGTGTGTGTATACACAATCATGACTGGAGAAACATGTTCTCAAGAAGTAACCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTAGTCATTTATGTTATTaGGAGGGAAGTGGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPSHLCY*EGSGWG
Trigger: TCCCCACCCACTTCCCTCCAAATAACATAAATGACT...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTTCACAAATAAAGTACTaGGGAGGGCCATACTCTCTC +
Preference number: 3 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPSQIKY*GGPYSL
Trigger: GAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGA...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGTTACAGTACTGGAGATaGGGGGATAACCAAAGACAA +
Preference number: 3 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWLQYWR*GDNQRQ
Trigger: TTGTCTTTGGTTATCCCCCAATCTCCAGTACTGTAA...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGGTCTGTTCACATCCTTaGCCCACTTTTAAATGGAGT +
Preference number: 3 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWVCSHP*PTFKWS
Trigger: ACTCCATTTAAAAGTGGGCAAAGGATGTGAACAGAC...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR CCA 72 bp TTCTTTATCCAGTCTATTATTGATGGGCATTGTGGTTaGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCA +
Preference number: 3 (lower is better)
Translates to: FFIQSIIDGHCG*FHVFAIVNSAA
Trigger: TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAATAATAGACTGGATAAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR-3UTR CAA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGTTATCCAGTCTATTATaGATGGGCATTGTGGTTGGT +
Preference number: 3 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWLSSLL*MGIVVG
Trigger: ACCAACCACAATGCCCATCAATAATAGACTGGATAA...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR TCA 72 bp TCCAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTaGGAATATGTGGTATTTGGTTTTCTGTTCTTGCAT +
Preference number: 3 (lower is better)
Translates to: SKSSHHLAPTYK*EYVVFGFLFLH
Trigger: ATGCAAGAACAGAAAACCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACGCCTTTTGGCGGCCCTaGGCAGAAGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYAFWRP*AEGILR
Trigger: CCTCAGGATCCCTTCTGCTCAGGGCCGCCAAAAGGC...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCCACCATCTCAGCCTGTaGGGCATCCTCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: ITAETWLLSALCVCTLSFHHLSL*GILTGD
Trigger: GTCTCCTGTGAGGATGCCTCACAGGCTGAGATGGTG...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCATCCTCCAGCCAGTGTaGCACAGAGCTGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAILQPV*HRAGWS
Trigger: TGACCAACCAGCTCTGTGGCACACTGGCTGGAGGAT...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTGAGAAGCTGGAAGGCTaGTCGTGTTGGAAACCCCAG +
Preference number: 4 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCEKLEG*SCWKPQ
Trigger: CTGGGGTTTCCAACACGACCAGCCTTCCAGCTTCTC...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTGCCTTTTGGCGGCCCTaGGCAGAAGGGATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLAFWRP*AEGILR
Trigger: CCTCAGGATCCCTTCTGCTCAGGGCCGCCAAAAGGC...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAGGCACAGGTGGAGAATaGCTTTTGGCGGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAGTGGE*LLAALS
Trigger: GCTCAGGGCCGCCAAAAGGCATTCTCCACCTGTGCC...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACAAGTACATGGGCTTATaGAGCTGCCCATCACTGTGG +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYKYMGL*SCPSLW
Trigger: CCACAGTGATGGGCAGCTGCATAAGCCCATGTACTT...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCGATAGCAGCGTAGGATaGCACCACAACACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQADSSVG*HHNTKR
Trigger: CCTCTTTGTGTTGTGGTGGCATCCTACGCTGCTATC...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACTGGGTGACTCTGGAGTaGTTGCATGACCCCACTTAT +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYWVTLE*LHDPTY
Trigger: ATAAGTGGGGTCATGCAACCACTCCAGAGTCACCCA...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR TCA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTAATTGTAGGCATACATaGGTTTGGGACGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCNCRHT*VWDGHR
Trigger: CCTATGCCCGTCCCAAACTCATGTATGCCTACAATT...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCACCTGCCTCAGTCTCTTaGGTAGCTGGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAPASVS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAAGAGACTGAGGCAGG...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTGGGGACTCCCTATGTTaGCCAGGCTGGGCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPGDSLC*PGWAQV
Trigger: AACTTGGGCCCAGCCTGGTCAACATAGGGAGTCCCC...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTGGCACAGGTGGAGAATaGCTTTTGGCGGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPGTGGE*LLAALS
Trigger: GCTCAGGGCCGCCAAAAGGCATTCTCCACCTGTGCC...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCGAAGGCTGGTCGTGTTaGAAACCCCAGAAGAATGAA +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAEGWSC*KPQKNE
Trigger: TTCATTCTTCTGGGGTTTCCAACACGACCAGCCTTC...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAGAGAAGCTGGAAGGCTaGTCGTGTTGGAAACCCCAG +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAEKLEG*SCWKPQ
Trigger: CTGGGGTTTCCAACACGACCAGCCTTCCAGCTTCTC...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCGATGGGGTTGAGGAGTaGAACAATGACAGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQADGVEE*NNDSVE
Trigger: CTCTACACTGTCATTGTTCCACTCCTCAACCCCATC...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCATTGGAGGGAAGTGGGTaGGGACTCCCTATGTTGACC +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAALEGSG*GLPMLT
Trigger: GGTCAACATAGGGAGTCCCCACCCACTTCCCTCCAA...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTCACCATCTCAGCCTGTaGGGCATCCTCACAGGAGAC +
Preference number: 4 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPHHLSL*GILTGD
Trigger: GTCTCCTGTGAGGATGCCTCACAGGCTGAGATGGTG...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCCCAGAGGTTACTTCTTaGGAACATGTTTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAPEVTS*EHVSPV
Trigger: GACTGGAGAAACATGTTCTCAAGAAGTAACCTCTGG...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGGGGGACTCCCTATGTTaGCCAGGCTGGGCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWGDSLC*PGWAQV
Trigger: AACTTGGGCCCAGCCTGGTCAACATAGGGAGTCCCC...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACATTAGTTATTTCTCCTaGTCCTCTACCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYISYFS*SSTSSH
Trigger: GTGGGAGGAGGTAGAGGATCAGGAGAAATAACTAAT...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTATTAGTTATTTCTCCTaGTCCTCTACCTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCISYFS*SSTSSH
Trigger: GTGGGAGGAGGTAGAGGATCAGGAGAAATAACTAAT...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCGGTCTTTCTGAGGGCTaGCTTTACTTCATGGTTCCT +
Preference number: 4 (lower is better)
Translates to: ITAETWLLSALCVCTLSFGLSEG*LYFMVP
Trigger: AGGAACCATGAAGTAAAGGCAGCCCTCAGAAAGACC...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCTTTTGGGCACATAAATaGTCTCCAGACCACCCTTTC +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAFWAHK*SPDHPF
Trigger: GAAAGGGTGGTCTGGAGACCATTTATGTGCCCAAAA...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAAGTGTGCCACAGAGCTaGTTGGTCATGATGACTGGG +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAASVPQS*LVMMTG
Trigger: CCCAGTCATCATGACCAACCAGCTCTGTGGCACACT...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACGCAGTGTTACAGTACTaGAGATTGGGGGATAACCAA +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYAVLQY*RLGDNQ
Trigger: TTGGTTATCCCCCAATCTCCAGTACTGTAACACTGC...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTGTCATTTATGTTATTTaGAGGGAAGTGGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCVIYVI*REVGGD
Trigger: GTCCCCACCCACTTCCCTCCAAATAACATAAATGAC...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTGAATTATGGTGGTCATaGCTGGCTGTGGGCACAGAC +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLELWWS*LAVGTD
Trigger: GTCTGTGCCCACAGCCAGTCATGACCACCATAATTC...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR TCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCTACTCTTGTCATGACTaGGGAAGTCAACAAGCATCT +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAYSCHD*GSQQAS
Trigger: AGATGCTTGTTGACTTCCTCAGTCATGACAAGAGTA...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACGAAATACTCTTGTCATaGCTGAGGAAGTCAACAAGC +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYEILLS*LRKSTS
Trigger: GCTTGTTGACTTCCTCAGTCATGACAAGAGTATTTC...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCCACAAAAGTAGTGATTaGTCTGAGGCATGCCACAGT +
Preference number: 4 (lower is better)
Translates to: ITAETWLLSALCVCTLSFHKSSD*SEACHS
Trigger: ACTGTGGCATGCCTCAGATCAATCACTACTTTTGTG...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCCCAGAGGTTACTTCTTaGGAACATGTTTCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: ITAETWLLSALCVCTLSFPEVTS*EHVSPV
Trigger: GACTGGAGAAACATGTTCTCAAGAAGTAACCTCTGG...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCACTTGTCTCTCAGCCTaGTACCAGAGGTTACTTCTT +
Preference number: 4 (lower is better)
Translates to: ITAETWLLSALCVCTLSFTCLSA*YQRLLL
Trigger: AAGAAGTAACCTCTGGTATCAGGCTGAGAGACAAGT...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTCCTGCCTCAGTCTCTTaGGTAGCTGGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPPASVS*VAGTTG
Trigger: ACCTGTAGTCCCAGCTACTCAAGAGACTGAGGCAGG...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACTCCCATTTCAAGTCTTaGTCTGTGTCCTATTGCTTC +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYSHFKS*SVSYCF
Trigger: GAAGCAATAGGACACAGAGCAAGACTTGAAATGGGA...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR GCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCTGGAGAGAACGTTCTTaGTTGTGTCTAACAATGTGC +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAWRERS*LCLTMC
Trigger: GCACATTGTTAGACACAAGCAAGAACGTTCTCTCCA...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR GCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAATGGGCTTATGCAGCTaGCCATCACTGTGGATAGCT +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAMGLCS*PSLWIA
Trigger: AGCTATCCACAGTGATGGGCAGCTGCATAAGCCCAT...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAGATAGCAGCGTAGGATaGCACCACAACACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAADSSVG*HHNTKR
Trigger: CCTCTTTGTGTTGTGGTGGCATCCTACGCTGCTATC...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCATCTCTAGGGGCAATTTaGGTGACTCTGGAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAASLGAI*VTLEWL
Trigger: CAACCACTCCAGAGTCACCCAAATTGCCCCTAGAGA...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CCA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCATTACTGCAGAAACATaGTTGCTCTCTGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: ITAETWLLSALCVCTLSFITAET*LLSALC
Trigger: ACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR CAA 72 bp GAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATaGTCTTTCCTCTGTGTGTGTCTGTGTCCAAATTTT +
Preference number: 4 (lower is better)
Translates to: ETWLLSALCVCT*SFLCVCLCPNF
Trigger: AAAATTTGGACACAGACACACACAGAGGAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTAGCCACAGTCACTCTTaGTCCCCATTTCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLSHSHS*SPFLNS
Trigger: GCTGTTGAGAAATGGGGATCAAGAGTGACTGTGGCT...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR TCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCGCTTGCTTAGGAGTTTaGCAAAAGTGCATTCAAATC +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAACLGV*QKCIQI
Trigger: GATTTGAATGCACTTTTGTCAAACTCCTAAGCAAGC...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR TCA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCAGCAAAATCAGGTTTaGTGCAATTATTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCQQNQV*CNYSPA
Trigger: AGCTGGTGAATAATTGCATCAAACCTGATTTTGCTG...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCGAAACCCCAGAAGAATaGAACGTGTTGTCACTGTAT +
Preference number: 4 (lower is better)
Translates to: ITAETWLLSALCVCTLSFETPEE*NVLSLY
Trigger: ATACAGTGACAACACGTTTCATTCTTCTGGGGTTTC...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTATGTTTCTCCAGTCATaGTTGTGTATACACACACAC +
Preference number: 4 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCMFLQS*LCIHTH
Trigger: GTGTGTGTGTATACACAATCATGACTGGAGAAACAT...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCCCTTTTCTAACCATCTaGGAGATGAACGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAPFLTI*EMNDGF
Trigger: AAAACCATCGTTCATCTCTCAGATGGTTAGAAAAGG...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACCACTCCCAACAACATTaGATACGTGTTCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYHSQQH*IRVPFS
Trigger: AGAAAAAGGAACACGTATTCAATGTTGTTGGGAGTG...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCGAGCCAGAAAACTACTaGCCATACTATCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: ITAETWLLSALCVCTLSFEPENY*PYYPFP
Trigger: AGGAAATGGATAGTATGGGCAGTAGTTTTCTGGCTC...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR GCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACAGTTCCTATGATATTTaGTGTGACCTTTCCAGGCTA +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYSSYDI*CDLSRL
Trigger: TAGCCTGGAAAGGTCACAGCAAATATCATAGGAACT...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR GCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTATGGGCTTATGCAGCTaGCCATCACTGTGGATAGCT +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLMGLCS*PSLWIA
Trigger: AGCTATCCACAGTGATGGGCAGCTGCATAAGCCCAT...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCGAAGGATGTACTCAGTaGAGACAAAGGTCACAAAAA +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAEGCTQ*RQRSQK
Trigger: TTTTTGTGACCTTTGTCTGCACTGAGTACATCCTTC...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGATCCTCCAGCCAGTGTaGCACAGAGCTGGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWILQPV*HRAGWS
Trigger: TGACCAACCAGCTCTGTGGCACACTGGCTGGAGGAT...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACAGGTATGTGCCACTGTaGCTAACAGGCATTAATTTA +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYRYVPL*LTGINL
Trigger: TAAATTAATGCCTGTTAGGCACAGTGGCACATACCT...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCAGGTATGTGCCACTGTaGCTAACAGGCATTAATTTA +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQARYVPL*LTGINL
Trigger: TAAATTAATGCCTGTTAGGCACAGTGGCACATACCT...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAAACATGGTTGCTCTCTaGCCTGTGTGTGTGCACATT +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAANMVAL*PVCVHI
Trigger: AATGTGCACACACACAGGGCAGAGAGCAACCATGTT...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTTATGGTGGTCATGACTaGCTGTGGGCACAGACAAAG +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLYGGHD*LWAQTK
Trigger: CTTTGTCTGTGCCCACAGCCAGTCATGACCACCATA...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTAGTGTGCCACAGAGCTaGTTGGTCATGATGACTGGG +
Preference number: 4 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPSVPQS*LVMMTG
Trigger: CCCAGTCATCATGACCAACCAGCTCTGTGGCACACT...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCGGAGACGTTAAGGAGTaGAGAGATATCACAAAAGTA +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAGDVKE*RDITKV
Trigger: TACTTTTGTGATATCTCTCCACTCCTTAACGTCTCC...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACCCCTACTTTCAAATATaGTCACATTCTGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYPYFQI*SHSERL
Trigger: CAGTCTCTCAGAATGTGACCATATTTGAAAGTAGGG...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
3UTR CAA 72 bp TCCTTAGCTTATAGATGCATTACTGCAGAAACATGGTaGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLAYRCITAETW*LSALCVCTLSF
Trigger: GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATCTATAAGCTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCGAGAACCAAAGCTTTTaGGAAAAGATGGAATTTAGG +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAENQSF*EKMEFR
Trigger: CCTAAATTCCATCTTTTCTCAAAAGCTTTGGTTCTC...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR TCA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCGTGTTGTCACTGTATaGTTATCTACTTCCAGAATT +
Preference number: 4 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCRVVTV*LSTSRI
Trigger: AATTCTGGAAGTAGATAATCATACAGTGACAACACG...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCCGTGTTGTCACTGTATaGTTATCTACTTCCAGAATT +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQARVVTV*LSTSRI
Trigger: AATTCTGGAAGTAGATAATCATACAGTGACAACACG...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTTGGGACGGGCATAGGTaGAAAGTGTCATGGAATAGA +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLWDGHR*KVSWNR
Trigger: TCTATTCCATGACACTTTTCACCTATGCCCGTCCCA...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTAATTGTAGGCATACATaGGTTTGGGACGGGCATAGG +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLNCRHT*VWDGHR
Trigger: CCTATGCCCGTCCCAAACTCATGTATGCCTACAATT...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCCTCTCAGTTCAAGCCTaGAAGGAATCTATACATTTT +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQALSVQA*KESIHF
Trigger: AAAATGTATAGATTCCTTTCAGGCTTGAACTGAGAG...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCGTTCCTTATAGATGCTaGATATTAGACCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAVPYRC*ILDLCQ
Trigger: CTGACAAAGGTCTAATATTCAGCATCTATAAGGAAC...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCGTTGATAATTTCTTTTaGTGTGCAGAAGCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAVDNFF*CAEACQ
Trigger: CTGACAAGCTTCTGCACAGCAAAAGAAATTATCAAC...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACGTTGATAATTTCTTTTaGTGTGCAGAAGCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYVDNFF*CAEACQ
Trigger: CTGACAAGCTTCTGCACAGCAAAAGAAATTATCAAC...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCTCTGTTCACATCCTTTaGCCACTTTTAAATGGAGTT +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQASVHIL*PLLNGV
Trigger: AACTCCATTTAAAAGTGGGCAAAGGATGTGAACAGA...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCATGGGGATAATACAATaGGGTTCACATTTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAMGIIQ*GSHFVN
Trigger: GTTCACAAAATGTGAACCCCATTGTATTATCCCCAT...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCCACTTATCTGTAAAATaGAGAGAACGTTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAHLSVK*RERSCL
Trigger: CAAGCAAGAACGTTCTCTCCATTTTACAGATAAGTG...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTGAAGGCTGGTCGTGTTaGAAACCCCAGAAGAATGAA +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLEGWSC*KPQKNE
Trigger: TTCATTCTTCTGGGGTTTCCAACACGACCAGCCTTC...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCTCACACCAGTTAGAATaGCTATTATTATGGACACAG +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQASHQLE*LLLWTQ
Trigger: CTGTGTCCATAATAATAGCCATTCTAACTGGTGTGA...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCTATGGTGGTCATGACTaGCATTTTCTCAGGAATATA +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAYGGHD*HFLRNI
Trigger: TATATTCCTGAGAAAATGCCAGTCATGACCACCATA...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641282.1
CDS-3UTR TCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAGAAATACTCTTGTCATaGCTGAGGAAGTCAACAAGC +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAEILLS*LRKSTS
Trigger: GCTTGTTGACTTCCTCAGTCATGACAAGAGTATTTC...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTCACAAAAGTAGTGATTaGTCTGAGGCATGCCACAGT +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLHKSSD*SEACHS
Trigger: ACTGTGGCATGCCTCAGATCAATCACTACTTTTGTG...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTTGGGACGGGCATAGGTaGAAAGTGTCATGGAATAGA +
Preference number: 4 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPWDGHR*KVSWNR
Trigger: TCTATTCCATGACACTTTTCACCTATGCCCGTCCCA...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCCTGTTTTTAAGTCTTTaGGGAATCGTTACACTGTCT +
Preference number: 4 (lower is better)
Translates to: ITAETWLLSALCVCTLSFLFLSL*GIVTLS
Trigger: AGACAGTGTAACGATTCCTCAAAGACTTAAAAACAG...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAGAATTATGGTGGTCATaGCTGGCATTTTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAELWWS*LAFSQE
Trigger: TTCCTGAGAAAATGCCAGTCATGACCACCATAATTC...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641282.1
CDS-3UTR GCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACATCCATTGTATAAAGTaGTTGCTTAGGAGTTTGACA +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYIHCIK*LLRSLT
Trigger: TGTCAAACTCCTAAGCAAGCACTTTATACAATGGAT...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR GCA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACTTGTGTCTAACAATGTaGTTAAGCTTGAATGAAGCA +
Preference number: 4 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYLCLTM*LSLNEA
Trigger: TGCTTCATTCAAGCTTAAGCACATTGTTAGACACAA...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR GCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGAAGTACATGGGCTTATaGAGCTGCCCATCACTGTGG +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWKYMGL*SCPSLW
Trigger: CCACAGTGATGGGCAGCTGCATAAGCCCATGTACTT...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTAACATGGTTGCTCTCTaGCCTGTGTGTGTGCACATT +
Preference number: 4 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPNMVAL*PVCVHI
Trigger: AATGTGCACACACACAGGGCAGAGAGCAACCATGTT...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCTCCTTAGCTTATAGATaGATTACTGCAGAAACATGG +
Preference number: 4 (lower is better)
Translates to: ITAETWLLSALCVCTLSFSLAYR*ITAETW
Trigger: CCATGTTTCTGCAGTAATGCATCTATAAGCTAAGGA...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTTTGGTTTTCTGTTCTTaGATTAGTTTGCTAAAGGTG +
Preference number: 4 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCLVFCS*ISLLKV
Trigger: CACCTTTAGCAAACTAATGCAAGAACAGAAAACCAA...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAAGCTGCCCATCACTGTaGATAGCTAAGATGATAAGA +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAASCPSL*IAKMIR
Trigger: TCTTATCATCTTAGCTATCCACAGTGATGGGCAGCT...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTGTCATTTATGTTATTTaGAGGGAAGTGGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLVIYVI*REVGGD
Trigger: GTCCCCACCCACTTCCCTCCAAATAACATAAATGAC...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCCCTTTGTCAGTTGTATaGTTTGCCAAAAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAPLSVV*FAKNVF
Trigger: GAAAACATTTTTGGCAAACCATACAACTGACAAAGG...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTTTCAATTCTCTTTTCTaGTCTTCTCCAGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLFNSLF*SSPEPQ
Trigger: CTGTGGCTCTGGAGAAGAGCAGAAAAGAGAATTGAA...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR GCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAGAAGGATGTACTCAGTaGAGACAAAGGTCACAAAAA +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAEGCTQ*RQRSQK
Trigger: TTTTTGTGACCTTTGTCTGCACTGAGTACATCCTTC...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTAGCTGCCCATCACTGTaGATAGCTAAGATGATAAGA +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLSCPSL*IAKMIR
Trigger: TCTTATCATCTTAGCTATCCACAGTGATGGGCAGCT...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGGATGGGGTTGAGGAGTaGAACAATGACAGTGTAGAG +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWDGVEE*NNDSVE
Trigger: CTCTACACTGTCATTGTTCCACTCCTCAACCCCATC...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGTCTGGAGTGGTTGCATaGCCCCACTTATCTGTAAAA +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWSGVVA*PHLSVK
Trigger: TTTTACAGATAAGTGGGGTCATGCAACCACTCCAGA...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTGAAACCCCAGAAGAATaGAACGTGTTGTCACTGTAT +
Preference number: 4 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPETPEE*NVLSLY
Trigger: ATACAGTGACAACACGTTTCATTCTTCTGGGGTTTC...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCACTCTCAGTTCAAGCCTaGAAGGAATCTATACATTTT +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAALSVQA*KESIHF
Trigger: AAAATGTATAGATTCCTTTCAGGCTTGAACTGAGAG...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTATGTTTCTCCAGTCATaGTTGTGTATACACACACAC +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLMFLQS*LCIHTH
Trigger: GTGTGTGTGTATACACAATCATGACTGGAGAAACAT...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGGCAGTGTTACAGTACTaGAGATTGGGGGATAACCAA +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWAVLQY*RLGDNQ
Trigger: TTGGTTATCCCCCAATCTCCAGTACTGTAACACTGC...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGAACATCCCCATCTGCTaGATATGGAGAAGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWNIPIC*IWRRER
Trigger: TCTTTCTCTTCTCCATATTCAGCAGATGGGGATGTT...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR TCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTCTGTTTTTAAGTCTTTaGGGAATCGTTACACTGTCT +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLLFLSL*GIVTLS
Trigger: AGACAGTGTAACGATTCCTCAAAGACTTAAAAACAG...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR GCA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCATTGGTTTTCTGTTCTTaGATTAGTTTGCTAAAGGTG +
Preference number: 4 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAALVFCS*ISLLKV
Trigger: CACCTTTAGCAAACTAATGCAAGAACAGAAAACCAA...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTCCAATATATCACTTTTaGGCACATAAATGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLPIYHF*AHKWSP
Trigger: TGGAGACCATTTATGTGCCCAAAAGTGATATATTGG...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTGGAGACGTTAAGGAGTaGAGAGATATCACAAAAGTA +
Preference number: 4 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPGDVKE*RDITKV
Trigger: TACTTTTGTGATATCTCTCCACTCCTTAACGTCTCC...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGTACAGTACTGGAGATTaGGGGATAACCAAAGACAAG +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWYSTGD*GITKDK
Trigger: CTTGTCTTTGGTTATCCCCCAATCTCCAGTACTGTA...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGCTGCCTCTTGAATTATaGAGAGAACCAAAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWLPLEL*REPKLL
Trigger: CAAAAGCTTTGGTTCTCTTCATAATTCAAGAGGCAG...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR TCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGCACTCCCAACAACATTaGATACGTGTTCCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWHSQQH*IRVPFS
Trigger: AGAAAAAGGAACACGTATTCAATGTTGTTGGGAGTG...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGCCCTACTTTCAAATATaGTCACATTCTGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWPYFQI*SHSERL
Trigger: CAGTCTCTCAGAATGTGACCATATTTGAAAGTAGGG...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTCCTTTGTCAGTTGTATaGTTTGCCAAAAATGTTTTC +
Preference number: 4 (lower is better)
Translates to: ILGITNKVLGRAILSLSLPLSVV*FAKNVF
Trigger: GAAAACATTTTTGGCAAACCATACAACTGACAAAGG...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTTCACACCAGTTAGAATaGCTATTATTATGGACACAG +
Preference number: 4 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPSHQLE*LLLWTQ
Trigger: CTGTGTCCATAATAATAGCCATTCTAACTGGTGTGA...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR TCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGGTTCCTTATAGATGCTaGATATTAGACCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWVPYRC*ILDLCQ
Trigger: CTGACAAAGGTCTAATATTCAGCATCTATAAGGAAC...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CCA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGGAATGGCTATTATTATaGACACAGGAACATCACACT +
Preference number: 4 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWEWLLL*TQEHHT
Trigger: AGTGTGATGTTCCTGTGTCCATAATAATAGCCATTC...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCTGGGGACTCCCTATGTaGACCAGGCTGGGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAWGLPM*TRLGPS
Trigger: ACTTGGGCCCAGCCTGGTCAACATAGGGAGTCCCCA...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCGGTGGAGAATGCCTTTaGGCGGCCCTGAGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: ITAETWLLSALCVCTLSFGGECL*AALSRR
Trigger: CCTTCTGCTCAGGGCCGCCAAAAGGCATTCTCCACC...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCGGACAACATACTTTTTaGGAGGGAGGGAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQAGQHTF*EGGRSG
Trigger: CCCACTCCTCCCTCCCTCCAAAAAAGTATGTTGTCC...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACACTGCAGAAACATGGTaGCTCTCTGCCCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYTAETW*LSALCV
Trigger: CACACACAGGGCAGAGAGCAACCATGTTTCTGCAGT...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTACTGCAGAAACATGGTaGCTCTCTGCCCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCTAETW*LSALCV
Trigger: CACACACAGGGCAGAGAGCAACCATGTTTCTGCAGT...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTGGTGGAGAATGCCTTTaGGCGGCCCTGAGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: ILGITNKVLGRAILSLSLGGECL*AALSRR
Trigger: CCTTCTGCTCAGGGCCGCCAAAAGGCATTCTCCACC...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCTTCTCTAGGGGCAATTaGGGTGACTCTGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: ITAETWLLSALCVCTLSFFSRGN*GDSGVV
Trigger: AACCACTCCAGAGTCACCCAAATTGCCCCTAGAGAA...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACGTGTCAGCAGATAGGTaGCCAGGAAAATGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYVSADR*PGKWRK
Trigger: TTTTCTCCATTTTCCTGGCAACCTATCTGCTGACAC...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTGTGTCAGCAGATAGGTaGCCAGGAAAATGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCVSADR*PGKWRK
Trigger: TTTTCTCCATTTTCCTGGCAACCTATCTGCTGACAC...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGTGGGGACTCCCTATGTaGACCAGGCTGGGCCCAAGT +
Preference number: 5 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWWGLPM*TRLGPS
Trigger: ACTTGGGCCCAGCCTGGTCAACATAGGGAGTCCCCA...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp CCAAAGACAAGACTGAGGGGGAAAGTGTGTAGTGATCATCTCTCAGTTCAAGCCAGTCATTTATGTTATTaGGAGGGAAGTGGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: PKTRLRGKVCSDHLSVQASHLCY*EGSGWG
Trigger: TCCCCACCCACTTCCCTCCAAATAACATAAATGACT...GGCTTGAACTGAGAGATGATCACTACACACTTTCCCCCTCAGTCTTGTCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTTCACAAATAAAGTACTaGGGAGGGCCATACTCTCTC +
Preference number: 5 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCSQIKY*GGPYSL
Trigger: GAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGA...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS TCA 90 bp GGTCGTGTTGGAAACCCCAGAAGAATGAAACGTGTTGTCACTGTATaGTTATCTACTTCCAGAATTATGGTGGTCATGACTGGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GRVGNPRRMKRVVTV*LSTSRIMVVMTGCG
Trigger: CCCACAGCCAGTCATGACCACCATAATTCTGGAAGTAGATAATCATACAGTGACAACACGTTTCATTCTTCTGGGGTTTCCAACACGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCCTATGGTTATTTGTATaGATAGAGCCCACCACCAGC +
Preference number: 5 (lower is better)
Translates to: ITAETWLLSALCVCTLSFLWLFV*IEPTTS
Trigger: GCTGGTGGTGGGCTCTATCAATACAAATAACCATAG...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCTCACAAATAAAGTACTaGGGAGGGCCATACTCTCTC +
Preference number: 5 (lower is better)
Translates to: ITAETWLLSALCVCTLSFSQIKY*GGPYSL
Trigger: GAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGA...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACGTCTGTTCACATCCTTaGCCCACTTTTAAATGGAGT +
Preference number: 5 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYVCSHP*PTFKWS
Trigger: ACTCCATTTAAAAGTGGGCAAAGGATGTGAACAGAC...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTGTTGTACAGATTATTTaGTCACCCAGGTATCAAGCC +
Preference number: 5 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCVVQII*SPRYQA
Trigger: GGCTTGATACCTGGGTGACAAAATAATCTGTACAAC...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS TCA 90 bp GTGTTGTCACTGTATGATTATCTACTTCCAGAATTATGGTGGTCATaGCTGGCTGTGGGCACAGACAAAGTCAGTTCCTTCCATGACACA +
Preference number: 5 (lower is better)
Translates to: VLSLYDYLLPELWWS*LAVGTDKVSSFHDT
Trigger: TGTGTCATGGAAGGAACTGACTTTGTCTGTGCCCACAGCCAGTCATGACCACCATAATTCTGGAAGTAGATAATCATACAGTGACAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS CCA 90 bp TGTATGATTATCTACTTCCAGAATTATGGTGGTCATGACTGGCTGTaGGCACAGACAAAGTCAGTTCCTTCCATGACACAAGCACTAGTC +
Preference number: 5 (lower is better)
Translates to: CMIIYFQNYGGHDWL*AQTKSVPSMTQALV
Trigger: GACTAGTGCTTGTGTCATGGAAGGAACTGACTTTGTCTGTGCCCACAGCCAGTCATGACCACCATAATTCTGGAAGTAGATAATCATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS CCA 90 bp TGTCACTGTATGATTATCTACTTCCAGAATTATGGTGGTCATGACTaGCTGTGGGCACAGACAAAGTCAGTTCCTTCCATGACACAAGCA +
Preference number: 5 (lower is better)
Translates to: CHCMIIYFQNYGGHD*LWAQTKSVPSMTQA
Trigger: TGCTTGTGTCATGGAAGGAACTGACTTTGTCTGTGCCCACAGCCAGTCATGACCACCATAATTCTGGAAGTAGATAATCATACAGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp CCCCTACTGTGTTCCCTACTGTGTGTCCAAGAGTTCTCATCATTTAGCTCCTACTTGCTCTGTGTCCTATaGCTTCAATTCTCTTTTCTG +
Preference number: 5 (lower is better)
Translates to: PLLCSLLCVQEFSSFSSYLLCVL*LQFSFL
Trigger: CAGAAAAGAGAATTGAAGCAATAGGACACAGAGCAA...GTAGGAGCTAAATGATGAGAACTCTTGGACACACAGTAGGGAACACAGTAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTACAGCAAAATCAGGTTaGATGCAATTATTCACCAGC +
Preference number: 5 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCTAKSG*MQLFTS
Trigger: GCTGGTGAATAATTGCATCAAACCTGATTTTGCTGT...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTGCCACAGTAGTGAAGTaGTGCTATAAAAACCATCTT +
Preference number: 5 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCATVVK*CYKNHL
Trigger: AAGATGGTTTTTATAGCACAACTTCACTACTGTGGC...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTGGACAACATACTTTTTaGGAGGGAGGGAGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPGQHTF*EGGRSG
Trigger: CCCACTCCTCCCTCCCTCCAAAAAAGTATGTTGTCC...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTTTATCCAGTCTATTATaGATGGGCATTGTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCLSSLL*MGIVVG
Trigger: ACCAACCACAATGCCCATCAATAATAGACTGGATAA...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS GCA 90 bp CATTTCAAGTCTTGCTCTGTGTCCTATTGCTTCAATTCTCTTTTCTaGTCTTCTCCAGAGCCACAGTCACTCTTGATCCCCATTTCTCAA +
Preference number: 5 (lower is better)
Translates to: HFKSCSVSYCFNSLF*SSPEPQSLLIPISQ
Trigger: TTGAGAAATGGGGATCAAGAGTGACTGTGGCTCTGGAGAAGAGCAGAAAAGAGAATTGAAGCAATAGGACACAGAGCAAGACTTGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCAGAGAACGTTCTTGCTaGTGTCTAACAATGTGCTTA +
Preference number: 5 (lower is better)
Translates to: ITAETWLLSALCVCTLSFRERSC*CLTMCL
Trigger: TAAGCACATTGTTAGACACAAGCAAGAACGTTCTCT...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGGTGACTCTGGAGTGGTaGCATGACCCCACTTATCTG +
Preference number: 5 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWVTLEW*HDPTYL
Trigger: CAGATAAGTGGGGTCATGCAACCACTCCAGAGTCAC...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTAAGTCAACAAGCATCTaGGGGCTGATGACTGTGACA +
Preference number: 5 (lower is better)
Translates to: ILGITNKVLGRAILSLSLKSTSI*GLMTVT
Trigger: TGTCACAGTCATCAGCCCCAAGATGCTTGTTGACTT...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCCTGAATATTAGACCTTaGTCAGTTGTATGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: ITAETWLLSALCVCTLSFLNIRP*SVVWFA
Trigger: GGCAAACCATACAACTGACAAAGGTCTAATATTCAG...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp GATGCATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTTCTGTTTTTAAGTCTTaGAGGAATCGTTACACTGTC +
Preference number: 5 (lower is better)
Translates to: DALLQKHGCSLPCVCAHCSVFKS*RNRYTV
Trigger: GACAGTGTAACGATTCCTCAAAGACTTAAAAACAGA...ACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAATGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS TCA 90 bp AAAAGAGAAGCTGGAAGGCTGGTCGTGTTGGAAACCCCAGAAGAATaGAACGTGTTGTCACTGTATGATTATCTACTTCCAGAATTATGG +
Preference number: 5 (lower is better)
Translates to: KREAGRLVVLETPEE*NVLSLYDYLLPELW
Trigger: CCATAATTCTGGAAGTAGATAATCATACAGTGACAACACGTTTCATTCTTCTGGGGTTTCCAACACGACCAGCCTTCCAGCTTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS TCA 90 bp GGTCGTGTTGGAAACCCCAGAAGAATGAAACGTGTTGTCACTGTATaGTTATCTACTTCCAGAATTATGGTGGTCATGACTGGCATTTTC +
Preference number: 5 (lower is better)
Translates to: GRVGNPRRMKRVVTV*LSTSRIMVVMTGIF
Trigger: GAAAATGCCAGTCATGACCACCATAATTCTGGAAGTAGATAATCATACAGTGACAACACGTTTCATTCTTCTGGGGTTTCCAACACGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641282.1
CDS CCA 90 bp GGCACAGACAAAGTCAGTTCCTTCCATGACACAAGCACTAGTCTATaGTTATTTGTATTGATAGAGCCCACCACCAGCAAATTTATCACA +
Preference number: 5 (lower is better)
Translates to: GTDKVSSFHDTSTSL*LFVLIEPTTSKFIT
Trigger: TGTGATAAATTTGCTGGTGGTGGGCTCTATCAATACAAATAACCATAGACTAGTGCTTGTGTCATGGAAGGAACTGACTTTGTCTGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCACAATGTGCTTAAGCTaGAATGAAGCAATAGTTGAG +
Preference number: 5 (lower is better)
Translates to: ITAETWLLSALCVCTLSFTMCLS*NEAIVE
Trigger: CTCAACTATTGCTTCATTCAAGCTTAAGCACATTGT...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTAAGTCAACAAGCATCTaGGGGCTGATGACTGTGACA +
Preference number: 5 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPKSTSI*GLMTVT
Trigger: TGTCACAGTCATCAGCCCCAAGATGCTTGTTGACTT...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTAGTCATTTATGTTATTaGGAGGGAAGTGGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: ILGITNKVLGRAILSLSLSHLCY*EGSGWG
Trigger: TCCCCACCCACTTCCCTCCAAATAACATAAATGACT...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTACTGCAGAAACATGGTTGCTCTCTGCCCTGTGTGTGTGCACATTGTCTTTCTCTGTTTTTAAGTCTTaGAGGAATCGTTACACTGTC +
Preference number: 5 (lower is better)
Translates to: ITAETWLLSALCVCTLSFSVFKS*RNRYTV
Trigger: GACAGTGTAACGATTCCTCAAAGACTTAAAAACAGA...GAAAGACAATGTGCACACACACAGGGCAGAGAGCAACCATGTTTCTGCAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCAGTTGTACAGATTATTTaGTCACCCAGGTATCAAGCC +
Preference number: 5 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAAVVQII*SPRYQA
Trigger: GGCTTGATACCTGGGTGACAAAATAATCTGTACAAC...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTTCATTCCCAAACCCATaGATACTAAACACCTTCCCA +
Preference number: 5 (lower is better)
Translates to: ILGITNKVLGRAILSLSLSFPNP*ILNTFP
Trigger: TGGGAAGGTGTTTAGTATCAATGGGTTTGGGAATGA...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTGATGGGCATTGTGGTTGGTTCCATGTCTTCGCTATTGTAAATAGTGCTGCACTCAAGAGCAGTAACTaGTCCAAGGTCATACAAAAT +
Preference number: 5 (lower is better)
Translates to: IDGHCGWFHVFAIVNSAALKSSN*SKVIQN
Trigger: ATTTTGTATGACCTTGGACAAGTTACTGCTCTTGAG...TGCAGCACTATTTACAATAGCGAAGACATGGAACCAACCACAATGCCCATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp ATCTTAGGAATCACAAATAAAGTACTTGGGAGGGCCATACTCTCTCTCTCTCTTGTCTGTTCACATCCTTaGCCCACTTTTAAATGGAGT +
Preference number: 5 (lower is better)
Translates to: ILGITNKVLGRAILSLSLVCSHP*PTFKWS
Trigger: ACTCCATTTAAAAGTGGGCAAAGGATGTGAACAGAC...AAGAGAGAGAGAGAGTATGGCCCTCCCAAGTACTTTATTTGTGATTCCTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS GCA 90 bp ACAAAAGTAGTGATTGATCTGAGGCATGCCACAGTAGTGAAGTTGTaGTATAAAAACCATCTTAATCATGGCAGTCATGAGTCCACAGAA +
Preference number: 5 (lower is better)
Translates to: TKVVIDLRHATVVKL*YKNHLNHGSHESTE
Trigger: TTCTGTGGACTCATGACTGCCATGATTAAGATGGTTTTTATAGCACAACTTCACTACTGTGGCATGCCTCAGATCAATCACTACTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTTTCCCATTTCAAGTCTaGCTCTGTGTCCTATTGCTT +
Preference number: 5 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPFPFQV*LCVLLL
Trigger: AAGCAATAGGACACAGAGCAAGACTTGAAATGGGAA...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTTTACAGTACTGGAGATaGGGGGATAACCAAAGACAA +
Preference number: 5 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPLQYWR*GDNQRQ
Trigger: TTGTCTTTGGTTATCCCCCAATCTCCAGTACTGTAA...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGATGGAGAGAACGTTCTaGCTTGTGTCTAACAATGTG +
Preference number: 5 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWMERTF*LVSNNV
Trigger: CACATTGTTAGACACAAGCAAGAACGTTCTCTCCAT...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTCTGAATATTAGACCTTaGTCAGTTGTATGGTTTGCC +
Preference number: 5 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPLNIRP*SVVWFA
Trigger: GGCAAACCATACAACTGACAAAGGTCTAATATTCAG...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTTTATCCAGTCTATTATaGATGGGCATTGTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPLSSLL*MGIVVG
Trigger: ACCAACCACAATGCCCATCAATAATAGACTGGATAA...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS GCA 90 bp TTATCTGTAAAATGGAGAGAACGTTCTTGCTTGTGTCTAACAATGTaGTTAAGCTTGAATGAAGCAATAGTTGAGCATACCCACAGGATT +
Preference number: 5 (lower is better)
Translates to: LSVKWRERSCLCLTM*LSLNEAIVEHTHRI
Trigger: AATCCTGTGGGTATGCTCAACTATTGCTTCATTCAAGCTTAAGCACATTGTTAGACACAAGCAAGAACGTTCTCTCCATTTTACAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp ATTTTGTCACCCAGGTATCAAGCCTATTACCCATTAGTTATTTCTCCTGATCCTTGCTTGCTTAGGAGTTaGACAAAAGTGCATTCAAAT +
Preference number: 5 (lower is better)
Translates to: ILSPRYQAYYPLVISPDPCLLRS*TKVHSN
Trigger: ATTTGAATGCACTTTTGTCAAACTCCTAAGCAAGCA...AGGATCAGGAGAAATAACTAATGGGTAATAGGCTTGATACCTGGGTGACAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS-3UTR CAA 90 bp CAAGAGTTCTCATCATTTAGCTCCTACTTACAAGTGAGAATATGTGGTATTTGGGCCACAGTAGTGAAGTaGTGCTATAAAAACCATCTT +
Preference number: 5 (lower is better)
Translates to: QEFSSFSSYLQVRICGIWATVVK*CYKNHL
Trigger: AAGATGGTTTTTATAGCACAACTTCACTACTGTGGC...CCAAATACCACATATTCTCACTTGTAAGTAGGAGCTAAATGATGAGAACTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS GCA 90 bp AACATCAAATGGGATTTAGAGTTTAAATTCAGTTCCTATGATATTTaGTGTGACCTTTCCAGGCTACTTTACTTACCCCACATACATAGC +
Preference number: 5 (lower is better)
Translates to: NIKWDLEFKFSSYDI*CDLSRLLYLPHIHS
Trigger: GCTATGTATGTGGGGTAAGTAAAGTAGCCTGGAAAGGTCACAGCAAATATCATAGGAACTGAATTTAAACTCTAAATCCCATTTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS TCA 72 bp CATGAGGGCCAAGAAGAAGTCCACCATCTCAGCCTGTaGGGCATCCTCACAGGAGACGTTAAGGAGTGGAGA +
Preference number: 6 (lower is better)
Translates to: HEGQEEVHHLSL*GILTGDVKEWR
Trigger: TCTCCACTCCTTAACGTCTCCTGTGAGGATGCCTCACAGGCTGAGATGGTGGACTTCTTCTTGGCCCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS TCA 72 bp CCACCCTTTCACTACAGGCAAAACATCCCCATCTGCTaGATATGGAGAAGAGAAAGAAGGCCCAACTACCCA +
Preference number: 6 (lower is better)
Translates to: PPFHYRQNIPIC*IWRRERRPNYP
Trigger: TGGGTAGTTGGGCCTTCTTTCTCTTCTCCATATTCAGCAGATGGGGATGTTTTGCCTGTAGTGAAAGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS TCA 72 bp GCTGGAAGGCTGGTCGTGTTGGAAACCCCAGAAGAATaGAACGTGTTGTCACTGTATGATTATCTACTTCCA +
Preference number: 6 (lower is better)
Translates to: AGRLVVLETPEE*NVLSLYDYLLP
Trigger: TGGAAGTAGATAATCATACAGTGACAACACGTTTCATTCTTCTGGGGTTTCCAACACGACCAGCCTTCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS GCA 72 bp GTGATTGATCTGAGGCATGCCACAGTAGTGAAGTTGTaGTATAAAAACCATCTTAATCATGGCAGTCATGAG +
Preference number: 6 (lower is better)
Translates to: VIDLRHATVVKL*YKNHLNHGSHE
Trigger: CTCATGACTGCCATGATTAAGATGGTTTTTATAGCACAACTTCACTACTGTGGCATGCCTCAGATCAATCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS CCA 72 bp TGTGCTTTACCAATATATCACTTTTGGGCACATAAATaGTCTCCAGACCACCCTTTCACTACAGGCAAAACA +
Preference number: 6 (lower is better)
Translates to: CALPIYHFWAHK*SPDHPFTTGKT
Trigger: TGTTTTGCCTGTAGTGAAAGGGTGGTCTGGAGACCATTTATGTGCCCAAAAGTGATATATTGGTAAAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS CAA 90 bp ATCACAAAAGTAGTGATTGATCTGAGGCATGCCACAGTAGTGAAGTaGTGCTATAAAAACCATCTTAATCATGGCAGTCATGAGTCCACA +
Preference number: 6 (lower is better)
Translates to: ITKVVIDLRHATVVK*CYKNHLNHGSHEST
Trigger: TGTGGACTCATGACTGCCATGATTAAGATGGTTTTTATAGCACAACTTCACTACTGTGGCATGCCTCAGATCAATCACTACTTTTGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS TCA 72 bp GGAAACCCCAGAAGAATGAAACGTGTTGTCACTGTATaGTTATCTACTTCCAGAATTATGGTGGTCATGACT +
Preference number: 6 (lower is better)
Translates to: GNPRRMKRVVTV*LSTSRIMVVMT
Trigger: AGTCATGACCACCATAATTCTGGAAGTAGATAATCATACAGTGACAACACGTTTCATTCTTCTGGGGTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS CAA 72 bp CCCCACTTATCTGTAAAATGGAGAGAACGTTCTTGCTaGTGTCTAACAATGTGCTTAAGCTTGAATGAAGCA +
Preference number: 6 (lower is better)
Translates to: PHLSVKWRERSC*CLTMCLSLNEA
Trigger: TGCTTCATTCAAGCTTAAGCACATTGTTAGACACAAGCAAGAACGTTCTCTCCATTTTACAGATAAGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS CAA 72 bp GTAGTGATTGATCTGAGGCATGCCACAGTAGTGAAGTaGTGCTATAAAAACCATCTTAATCATGGCAGTCAT +
Preference number: 6 (lower is better)
Translates to: VVIDLRHATVVK*CYKNHLNHGSH
Trigger: ATGACTGCCATGATTAAGATGGTTTTTATAGCACAACTTCACTACTGTGGCATGCCTCAGATCAATCACTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641282.1
ENST00000641622.1
CDS CAA 90 bp AAATGGAGAGAACGTTCTTGCTTGTGTCTAACAATGTGCTTAAGCTaGAATGAAGCAATAGTTGAGCATACCCACAGGATTAACAGCAAA +
Preference number: 6 (lower is better)
Translates to: KWRERSCLCLTMCLS*NEAIVEHTHRINSK
Trigger: TTTGCTGTTAATCCTGTGGGTATGCTCAACTATTGCTTCATTCAAGCTTAAGCACATTGTTAGACACAAGCAAGAACGTTCTCTCCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS GCA 72 bp TGGGATTTAGAGTTTAAATTCAGTTCCTATGATATTTaGTGTGACCTTTCCAGGCTACTTTACTTACCCCAC +
Preference number: 6 (lower is better)
Translates to: WDLEFKFSSYDI*CDLSRLLYLPH
Trigger: GTGGGGTAAGTAAAGTAGCCTGGAAAGGTCACAGCAAATATCATAGGAACTGAATTTAAACTCTAAATCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641622.1
CDS GCA 72 bp AAATGGAGAGAACGTTCTTGCTTGTGTCTAACAATGTaGTTAAGCTTGAATGAAGCAATAGTTGAGCATACC +
Preference number: 6 (lower is better)
Translates to: KWRERSCLCLTM*LSLNEAIVEHT
Trigger: GGTATGCTCAACTATTGCTTCATTCAAGCTTAAGCACATTGTTAGACACAAGCAAGAACGTTCTCTCCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641622.1