RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR56A4 (Homo sapiens)

Ensembl gene IDs: ENSG00000183389

Ensembl transcript IDs: ENST00000641156.1, ENST00000641835.1

Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTaGACATCTGGACTTAACCCAAGCCATGCCTTCATCGCACACAAG +
Preference number: 1 (lower is better)
Translates to: SGYSGQGTQPQVVPG*TSGLNPSHAFIAHK
Trigger: CTTGTGTGCGATGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR TCA 90 bp GTCGGGAGGATCAGGGAAGGAAGACCTACTGTGGGAGATGGCATTTaGATTCAACCTGGTAGGAAGGAAACAACAGGTGCTGGAGAGGAT +
Preference number: 1 (lower is better)
Translates to: VGRIREGRPTVGDGI*IQPGRKETTGAGED
Trigger: ATCCTCTCCAGCACCTGTTGTTTCCTTCCTACCAGGTTGAATTCAAATGCCATCTCCCACAGTAGGTCTTCCTTCCCTGATCCTCCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR GCA 90 bp ATGCAGCAAACAGCATCAGAGGGAATGAACAGGATGGCTCATTTGTaGCTAGGATGGGGACTTCAAGGTGAGATAGGAACTAGGATTATA +
Preference number: 1 (lower is better)
Translates to: MQQTASEGMNRMAHL*LGWGLQGEIGTRII
Trigger: TATAATCCTAGTTCCTATCTCACCTTGAAGTCCCCATCCTAGGCACAAATGAGCCATCCTGTTCATTCCCTCTGATGCTGTTTGCTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CCA 90 bp TGTTGGTGGCACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTaGAGATTCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA +
Preference number: 1 (lower is better)
Translates to: CWWHCKLVQPLWKSV*RFLRDLELEIPFDP
Trigger: TGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTGCCACCAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR GCA 90 bp GCCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTaGTATAAAGACACATGCACATGTATGTTTATTGCGGCACCATTC +
Preference number: 1 (lower is better)
Translates to: AIPLLGTYPKDYKSC*YKDTCTCMFIAAPF
Trigger: GAATGGTGCCGCAATAAACATACATGTGCATGTGTCTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CCA 90 bp ACACTTTTACACTGTTGGTGGCACTGTAAACTAGTTCAACCATTGTaGAAGTCAGTGTGGAGATTCCTCAGGGATCTAGAACTAGAAATA +
Preference number: 1 (lower is better)
Translates to: TLLHCWWHCKLVQPL*KSVWRFLRDLELEI
Trigger: TATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTGCCACCAACAGTGTAAAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CCA 90 bp TGCACATGTATGTTTATTGCGGCACCATTCACAATAGCAAAGACTTaGAACCAAGCCAAATGTCCAACAATGGTAGACTGGATTAAGAAA +
Preference number: 1 (lower is better)
Translates to: CTCMFIAAPFTIAKT*NQAKCPTMVDWIKK
Trigger: TTTCTTAATCCAGTCTACCATTGTTGGACATTTGGCTTGGTTCCAAGTCTTTGCTATTGTGAATGGTGCCGCAATAAACATACATGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR TCA 90 bp GGACAGTTGTCAAACAATGCCTGGACAAATGATGGACTTGAAATCTaGATTTGCATCCCCAAAAGAGACAGATTAAGACTGTTTATATTC +
Preference number: 1 (lower is better)
Translates to: GQLSNNAWTNDGLEI*ICIPKRDRLRLFIF
Trigger: GAATATAAACAGTCTTAATCTGTCTCTTTTGGGGATGCAAATTCAGATTTCAAGTCCATCATTTGTCCAGGCATTGTTTGACAACTGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR GCA 90 bp GGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACATaGACATGTATGTTTATTGCGGCACCATTCACAATAGCAAAGACT +
Preference number: 1 (lower is better)
Translates to: GTYPKDYKSCCYKDT*TCMFIAAPFTIAKT
Trigger: AGTCTTTGCTATTGTGAATGGTGCCGCAATAAACATACATGTGCATGTGTCTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR TCA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGAGCCGTCTACCAGGCTaGATCAGAGACAGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLSRLPG*IRDREG
Trigger: TCCTTCCCTGTCTCTGATTCAGCCTGGTAGACGGCT...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CAA 90 bp ATGGAAGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTaGTTCCAGGGTGGACATCTGGACTTAACCCAAGCCATGCCTTCA +
Preference number: 2 (lower is better)
Translates to: MEESRGIQGKALNPK*FQGGHLDLTQAMPS
Trigger: TGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR TCA 90 bp AGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGTGTTGCCTGAGATATTaGGAACAGAAGAATCCGAAC +
Preference number: 2 (lower is better)
Translates to: RESGYSGQGTQPQVVPGWCCLRY*EQKNPN
Trigger: GTTCGGATTCTTCTGTTCTCAATATCTCAGGCAACA...CCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CCA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGACTGCCTCAGGTGCCATaGAAGAGAGTCGGGGTATTC +
Preference number: 2 (lower is better)
Translates to: TATQDARIMIPVGRIREGLPQVP*KRVGVF
Trigger: GAATACCCCGACTCTCTTCCATGGCACCTGAGGCAG...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR TCA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGGTGTTCATTGTTGCCTaGGATATTGAGAACAGAAGA +
Preference number: 2 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLVFIVA*DIENRR
Trigger: TCTTCTGTTCTCAATATCTCAGGCAACAATGAACAC...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR GCA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATCACATCTGCCTCAGGTaGCATGGAAGAGAGTCGGGG +
Preference number: 2 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDHICLR*HGRESG
Trigger: CCCCGACTCTCTTCCATGGCACCTGAGGCAGATGTG...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR TCA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGACAGCATCAGAGGGAATaGACAGGATGGCTCATTTGT +
Preference number: 2 (lower is better)
Translates to: TATQDARIMIPVGRIREGQHQRE*TGWLIC
Trigger: ACAAATGAGCCATCCTGTTCATTCCCTCTGATGCTG...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR TCA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGAGTGGGAGATGGCATTTaGATTCAACCTGGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: TATQDARIMIPVGRIREGVGDGI*IQPGRK
Trigger: CTTCCTACCAGGTTGAATTCAAATGCCATCTCCCAC...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR GCA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTCACATCTGCCTCAGGTaGCATGGAAGAGAGTCGGGG +
Preference number: 2 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLAHICLR*HGRESG
Trigger: CCCCGACTCTCTTCCATGGCACCTGAGGCAGATGTG...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR GCA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGGCTCAGGAGGGAGGATaGAGCAAACAGCATCAGAGG +
Preference number: 2 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQAQEGG*SKQHQR
Trigger: CCTCTGATGCTGTTTGCTGCATCCTCCCTCCTGAGC...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR GCA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGAACTGTTGGCAGCTTTaGCAGCCACAGCTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKNCWQL*QPQLRR
Trigger: CCTCCTGAGCTGTGGCTGGCAAAGCTGCCAACAGTT...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CCA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTCTGCCTCAGGTGCCATaGAAGAGAGTCGGGGTATTC +
Preference number: 2 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLALPQVP*KRVGVF
Trigger: GAATACCCCGACTCTCTTCCATGGCACCTGAGGCAG...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CCA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGAATGAGCAGCTCATTTTaGCTACAGTGGCAGAGAAAA +
Preference number: 2 (lower is better)
Translates to: TATQDARIMIPVGRIREGMSSSF*LQWQRK
Trigger: TTTTCTCTGCCACTGTAGCCAAAATGAGCTGCTCAT...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR TCA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGAATGGTAAAAGAAGGCTaGTGTGAGAAGCATCAAATG +
Preference number: 2 (lower is better)
Translates to: TATQDARIMIPVGRIREGMVKEG*CEKHQM
Trigger: CATTTGATGCTTCTCACATCAGCCTTCTTTTACCAT...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR GCA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGACACATGTATGTTTATTaGGGCACCATTCACAATAGC +
Preference number: 2 (lower is better)
Translates to: TATQDARIMIPVGRIREGHMYVY*GTIHNS
Trigger: GCTATTGTGAATGGTGCCGCAATAAACATACATGTG...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CAA 90 bp GGAACACTTTTACACTGTTGGTGGCACTGTAAACTAGTTCAACCATaGTGGAAGTCAGTGTGGAGATTCCTCAGGGATCTAGAACTAGAA +
Preference number: 2 (lower is better)
Translates to: GTLLHCWWHCKLVQP*WKSVWRFLRDLELE
Trigger: TTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTGCCACCAACAGTGTAAAAGTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR TCA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATGTGTTCATTGTTGCCTaGGATATTGAGAACAGAAGA +
Preference number: 2 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDVFIVA*DIENRR
Trigger: TCTTCTGTTCTCAATATCTCAGGCAACAATGAACAC...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR TCA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATGATGGACTTGAAATCTaGATTTGCATCCCCAAAAGA +
Preference number: 2 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDDGLEI*ICIPKR
Trigger: TCTTTTGGGGATGCAAATTCAGATTTCAAGTCCATC...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR GCA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTAGGATGGCTCATTTGTaGCTAGGATGGGGACTTCAA +
Preference number: 2 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLARMAHL*LGWGLQ
Trigger: TTGAAGTCCCCATCCTAGGCACAAATGAGCCATCCT...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR GCA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATCACATGTATGTTTATTaGGGCACCATTCACAATAGC +
Preference number: 2 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDHMYVY*GTIHNS
Trigger: GCTATTGTGAATGGTGCCGCAATAAACATACATGTG...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CCA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGCATTTGTGCCTAGGATaGGGACTTCAAGGTGAGATA +
Preference number: 2 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQHLCLG*GLQGEI
Trigger: TATCTCACCTTGAAGTCCCCATCCTAGGCACAAATG...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CCA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGATCATTTTGGCTACAGTaGCAGAGAAAACAAAGTTTA +
Preference number: 2 (lower is better)
Translates to: TATQDARIMIPVGRIREGSFWLQ*QRKQSL
Trigger: TAAACTTTGTTTTCTCTGCCACTGTAGCCAAAATGA...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CAA 90 bp TCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGTaGGGACAGTTGTCAAACAATGCCTGGACAAATGATGGACTTGAA +
Preference number: 2 (lower is better)
Translates to: SAKISFSTNGSRIVQ*GQLSNNAWTNDGLE
Trigger: TTCAAGTCCATCATTTGTCCAGGCATTGTTTGACAACTGTCCCAACTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR GCA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTAAGAATAGAAAACGCTaGCCTCAGAGAGGTGGTACA +
Preference number: 2 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLAKNRKR*PQRGGT
Trigger: TGTACCACCTCTCTGAGGGCAGCGTTTTCTATTCTT...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CCA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGCTGCCCTCAGAGAGGTaGTACAGACTGAATATCTTA +
Preference number: 2 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKLPSER*YRLNIL
Trigger: TAAGATATTCAGTCTGTACCACCTCTCTGAGGGCAG...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CCA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTCTGCCCTCAGAGAGGTaGTACAGACTGAATATCTTA +
Preference number: 2 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLALPSER*YRLNIL
Trigger: TAAGATATTCAGTCTGTACCACCTCTCTGAGGGCAG...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR TCA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGTGTTGCCTGAGATATTaGGAACAGAAGAATCCGAAC +
Preference number: 2 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKCCLRY*EQKNPN
Trigger: GTTCGGATTCTTCTGTTCTCAATATCTCAGGCAACA...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CCA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATTCATTTTGGCTACAGTaGCAGAGAAAACAAAGTTTA +
Preference number: 2 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDSFWLQ*QRKQSL
Trigger: TAAACTTTGTTTTCTCTGCCACTGTAGCCAAAATGA...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR TCA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTGAAGCATCAAATGATTaGAGAGAGAGAGCAAAATGG +
Preference number: 2 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLAEASND*RERAKW
Trigger: CCATTTTGCTCTCTCTCTTCAATCATTTGATGCTTC...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CCA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGTTGTCAAACAATGCCTaGACAAATGATGGACTTGAA +
Preference number: 2 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQLSNNA*TNDGLE
Trigger: TTCAAGTCCATCATTTGTCCAGGCATTGTTTGACAA...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CCA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGACAATAGCAAAGACTTaGAACCAAGCCAAATGTCCA +
Preference number: 2 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKTIAKT*NQAKCP
Trigger: TGGACATTTGGCTTGGTTCCAAGTCTTTGCTATTGT...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CCA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTTGGATTAAGAAAATGTaGCACATCTACACCATGGAA +
Preference number: 2 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLAWIKKM*HIYTME
Trigger: TTCCATGGTGTAGATGTGCCACATTTTCTTAATCCA...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CCA 72 bp TCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTaGACATCTGGACTTAACCCAAGCCATGCCTTCATC +
Preference number: 3 (lower is better)
Translates to: SGQGTQPQVVPG*TSGLNPSHAFI
Trigger: GATGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGAAAACTGTTGGCAGCTTaGCCAGCCACAGCTCAGGAG +
Preference number: 3 (lower is better)
Translates to: TATQDARIMIPVGRIREGKLLAA*PATAQE
Trigger: CTCCTGAGCTGTGGCTGGCAAAGCTGCCAACAGTTT...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp AGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGTCTTGGCAAGATTCTTaGTTGCAGATTAGATCAGGA +
Preference number: 3 (lower is better)
Translates to: RESGYSGQGTQPQVVPGWSWQDS*LQIRSG
Trigger: TCCTGATCTAATCTGCAACAAAGAATCTTGCCAAGA...CCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp AGCACATCTGCCTCAGGTGCCATGGAAGAGAGTCGGGGTATTCAGGGCAAGGCATCTTGGCAAGATTCTTaGTTGCAGATTAGATCAGGA +
Preference number: 3 (lower is better)
Translates to: STSASGAMEESRGIQGKASWQDS*LQIRSG
Trigger: TCCTGATCTAATCTGCAACAAAGAATCTTGCCAAGA...TGCCTTGCCCTGAATACCCCGACTCTCTTCCATGGCACCTGAGGCAGATGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp AGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGTGGCAAGATTCTTTGTaGCAGATTAGATCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: RESGYSGQGTQPQVVPGWWQDSL*QIRSGK
Trigger: TTTTCCTGATCTAATCTGCAACAAAGAATCTTGCCA...CCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACACCGGGGACTGTaGTGGGTTAGGGGGAGTGGG +
Preference number: 3 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKTHRGL*WVRGSG
Trigger: CCCACTCCCCCTAACCCACAACAGTCCCCGGTGTGT...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR GCA 72 bp ACAGCATCAGAGGGAATGAACAGGATGGCTCATTTGTaGCTAGGATGGGGACTTCAAGGTGAGATAGGAACT +
Preference number: 3 (lower is better)
Translates to: TASEGMNRMAHL*LGWGLQGEIGT
Trigger: AGTTCCTATCTCACCTTGAAGTCCCCATCCTAGGCACAAATGAGCCATCCTGTTCATTCCCTCTGATGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp GGGTGGACATCTGGACTTAACCCAAGCCATGCCTTCATCGCACACAAGCCAGGTTGGCAAGATTCTTTGTaGCAGATTAGATCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: GWTSGLNPSHAFIAHKPGWQDSL*QIRSGK
Trigger: TTTTCCTGATCTAATCTGCAACAAAGAATCTTGCCA...ACCTGGCTTGTGTGCGATGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGGCACTCAACCCCAAGTaGTTCCAGGGTGGACATCTG +
Preference number: 3 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQALNPK*FQGGHL
Trigger: CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGC...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTAACAGGATGGCTCATTaGTGCCTAGGATGGGGACTT +
Preference number: 3 (lower is better)
Translates to: YLMLNDELMGAARQHGTCNRMAH*CLGWGL
Trigger: AAGTCCCCATCCTAGGCACAAATGAGCCATCCTGTT...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGAAACTGTTGGCAGCTTaGCCAGCCACAGCTCAGGAG +
Preference number: 3 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQKLLAA*PATAQE
Trigger: CTCCTGAGCTGTGGCTGGCAAAGCTGCCAACAGTTT...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR TCA 72 bp ATCAGGGAAGGAAGACCTACTGTGGGAGATGGCATTTaGATTCAACCTGGTAGGAAGGAAACAACAGGTGCT +
Preference number: 3 (lower is better)
Translates to: IREGRPTVGDGI*IQPGRKETTGA
Trigger: AGCACCTGTTGTTTCCTTCCTACCAGGTTGAATTCAAATGCCATCTCCCACAGTAGGTCTTCCTTCCCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATGATGAGTTCATGTCCTaGGTAGGGACATGGATGAAG +
Preference number: 3 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDDEFMS*VGTWMK
Trigger: CTTCATCCATGTCCCTACCAAGGACATGAACTCATC...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR TCA 72 bp GGAGGGATAGCATTAGGAGATATACCTAATGTTAAATaGCGAGTTAATGGGTGCAGCACGCCAACATGGCAC +
Preference number: 3 (lower is better)
Translates to: GGIALGDIPNVK*RVNGCSTPTWH
Trigger: GTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTATATCTCCTAATGCTATCCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CCA 72 bp GAGGGAATGAACAGGATGGCTCATTTGTGCCTAGGATaGGGACTTCAAGGTGAGATAGGAACTAGGATTATA +
Preference number: 3 (lower is better)
Translates to: EGMNRMAHLCLG*GLQGEIGTRII
Trigger: TATAATCCTAGTTCCTATCTCACCTTGAAGTCCCCATCCTAGGCACAAATGAGCCATCCTGTTCATTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CCA 72 bp CACTGTTGGTGGCACTGTAAACTAGTTCAACCATTGTaGAAGTCAGTGTGGAGATTCCTCAGGGATCTAGAA +
Preference number: 3 (lower is better)
Translates to: HCWWHCKLVQPL*KSVWRFLRDLE
Trigger: TTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTGCCACCAACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGAACAGGATGGCTCATTaGTGCCTAGGATGGGGACTT +
Preference number: 3 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQNRMAH*CLGWGL
Trigger: AAGTCCCCATCCTAGGCACAAATGAGCCATCCTGTT...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGAGGACAAATGATGGACTaGAAATCTGAATTTGCATCC +
Preference number: 3 (lower is better)
Translates to: TATQDARIMIPVGRIREGGQMMD*KSEFAS
Trigger: GGATGCAAATTCAGATTTCAAGTCCATCATTTGTCC...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATCACAATAGCAAAGACTaGGAACCAAGCCAAATGTCC +
Preference number: 3 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDHNSKD*EPSQMS
Trigger: GGACATTTGGCTTGGTTCCAAGTCTTTGCTATTGTG...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR TCA 72 bp GAGATTCCTCAGGGATCTAGAACTAGAAATACCATTTaGCCCAGCCATCCCATTACTGGGTACATACCCAAA +
Preference number: 3 (lower is better)
Translates to: EIPQGSRTRNTI*PSHPITGYIPK
Trigger: TTTGGGTATGTACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR TCA 72 bp GGGGTTTGGCAAATGGTGATAATGGTAAAAGAAGGCTaGTGTGAGAAGCATCAAATGATTGAAGAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: GVWQMVIMVKEG*CEKHQMIEERE
Trigger: CTCTCTCTCTTCAATCATTTGATGCTTCTCACATCAGCCTTCTTTTACCATTATCACCATTTGCCAAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CCA 72 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTaGAGATTCCTCAGGGATCTAGAACTAGAAATACCA +
Preference number: 3 (lower is better)
Translates to: HCKLVQPLWKSV*RFLRDLELEIP
Trigger: TGGTATTTCTAGTTCTAGATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CCA 72 bp AGAGGATGTGGAGAAATAGGAACACTTTTACACTGTTaGTGGCACTGTAAACTAGTTCAACCATTGTGGAAG +
Preference number: 3 (lower is better)
Translates to: RGCGEIGTLLHC*WHCKLVQPLWK
Trigger: CTTCCACAATGGTTGAACTAGTTTACAGTGCCACCAACAGTGTAAAAGTGTTCCTATTTCTCCACATCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR-3UTR CAA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTGACTGTTTATATTCCTaGGAGATACTGAACTGTGTG +
Preference number: 3 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLADCLYS*EILNCV
Trigger: CACACAGTTCAGTATCTCCAAGGAATATAAACAGTC...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR TCA 72 bp AACAAAGATTCACAAATAAATGTGTTCATTGTTGCCTaGGATATTGAGAACAGAAGAATCCGAACTCAGGCA +
Preference number: 3 (lower is better)
Translates to: NKDSQINVFIVA*DIENRRIRTQA
Trigger: TGCCTGAGTTCGGATTCTTCTGTTCTCAATATCTCAGGCAACAATGAACACATTTATTTGTGAATCTTTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR GCA 72 bp CCAAAGGATTATAAATCATGCTGCTATAAAGACACATaGACATGTATGTTTATTGCGGCACCATTCACAATA +
Preference number: 3 (lower is better)
Translates to: PKDYKSCCYKDT*TCMFIAAPFTI
Trigger: TATTGTGAATGGTGCCGCAATAAACATACATGTGCATGTGTCTTTATAGCAGCATGATTTATAATCCTTTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp GGGTGGACATCTGGACTTAACCCAAGCCATGCCTTCATCGCACACAAGCCAGGTACGTGCTCAAGGCCTTaGCCACAGCACCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GWTSGLNPSHAFIAHKPGTCSRP*PQHPRP
Trigger: AGGCCGAGGGTGCTGTGGCCAAGGCCTTGAGCACGT...ACCTGGCTTGTGTGCGATGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp AGCACATCTGCCTCAGGTGCCATGGAAGAGAGTCGGGGTATTCAGGGCAAGGCAGCTCAGGAGGGAGGATaGAGCAAACAGCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: STSASGAMEESRGIQGKAAQEGG*SKQHQR
Trigger: CCTCTGATGCTGTTTGCTGCATCCTCCCTCCTGAGC...TGCCTTGCCCTGAATACCCCGACTCTCTTCCATGGCACCTGAGGCAGATGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp AGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGAACTGTTGGCAGCTTTaGCAGCCACAGCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RESGYSGQGTQPQVVPGWNCWQL*QPQLRR
Trigger: CCTCCTGAGCTGTGGCTGGCAAAGCTGCCAACAGTT...CCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGCTGCCTCAGGTGCCATaGAAGAGAGTCGGGGTATTC +
Preference number: 4 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLLPQVP*KRVGVF
Trigger: GAATACCCCGACTCTCTTCCATGGCACCTGAGGCAG...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp AGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGTTCCTGCACAGTATCTaGGCCTGGCAGAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: RESGYSGQGTQPQVVPGWFLHSI*AWQKAW
Trigger: CCATGCTTTCTGCCAGGCTCAGATACTGTGCAGGAA...CCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp GGGTGGACATCTGGACTTAACCCAAGCCATGCCTTCATCGCACACAAGCCAGGTAACTGTTGGCAGCTTTaGCAGCCACAGCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GWTSGLNPSHAFIAHKPGNCWQL*QPQLRR
Trigger: CCTCCTGAGCTGTGGCTGGCAAAGCTGCCAACAGTT...ACCTGGCTTGTGTGCGATGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp AGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGTGTCTGGGAAACTGTTaGCAGCTTTGCCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RESGYSGQGTQPQVVPGWCLGNC*QLCQPQ
Trigger: CTGTGGCTGGCAAAGCTGCCAACAGTTTCCCAGACA...CCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CAA 72 bp AGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTaGTTCCAGGGTGGACATCTGGACTTAACCCAAGCC +
Preference number: 4 (lower is better)
Translates to: SRGIQGKALNPK*FQGGHLDLTQA
Trigger: GGCTTGGGTTAAGTCCAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGGGGCAGTGGAGTCATTaGTGGGAGATGCCATGTAAA +
Preference number: 4 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLGQWSH*WEMPCK
Trigger: TTTACATGGCATCTCCCAGCAATGACTCCACTGCCC...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp AGCACATCTGCCTCAGGTGCCATGGAAGAGAGTCGGGGTATTCAGGGCAAGGCAGGGCAGTGGAGTCATTaGTGGGAGATGCCATGTAAA +
Preference number: 4 (lower is better)
Translates to: STSASGAMEESRGIQGKAGQWSH*WEMPCK
Trigger: TTTACATGGCATCTCCCAGCAATGACTCCACTGCCC...TGCCTTGCCCTGAATACCCCGACTCTCTTCCATGGCACCTGAGGCAGATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGCAGCATCAGAGGGAATaGACAGGATGGCTCATTTGT +
Preference number: 4 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLQHQRE*TGWLIC
Trigger: ACAAATGAGCCATCCTGTTCATTCCCTCTGATGCTG...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGAGGATGGCTCATTTGTaGCTAGGATGGGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLRMAHL*LGWGLQ
Trigger: TTGAAGTCCCCATCCTAGGCACAAATGAGCCATCCT...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp GCCATGGAAGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGCATCAGAGGGAATaGACAGGATGGCTCATTTGT +
Preference number: 4 (lower is better)
Translates to: AMEESRGIQGKALNPKLFQHQRE*TGWLIC
Trigger: ACAAATGAGCCATCCTGTTCATTCCCTCTGATGCTG...GAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCTTCCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp AGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGCAGTGGAGTCATTGCTaGGAGATGCCATGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: RESGYSGQGTQPQVVPGWQWSHC*EMPCKV
Trigger: AACTTTACATGGCATCTCCCAGCAATGACTCCACTG...CCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CTGCCCTCAGAGAGGTGGTACAGACTGAATATCTTAATTGGGTCTAGGAGAATTACGTGCTCAAGGCCTTaGCCACAGCACCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LPSERWYRLNILIGSRRITCSRP*PQHPRP
Trigger: AGGCCGAGGGTGCTGTGGCCAAGGCCTTGAGCACGT...AATTCTCCTAGACCCAATTAAGATATTCAGTCTGTACCACCTCTCTGAGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGACCTACTGTGGGAGATaGCATTTGAATTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLTYCGR*HLNSTW
Trigger: CCAGGTTGAATTCAAATGCCATCTCCCACAGTAGGT...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp GCCATGGAAGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCTGCCCTCAGAGAGGTaGTACAGACTGAATATCTTA +
Preference number: 4 (lower is better)
Translates to: AMEESRGIQGKALNPKLFLPSER*YRLNIL
Trigger: TAAGATATTCAGTCTGTACCACCTCTCTGAGGGCAG...GAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCTTCCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp GGGTGGACATCTGGACTTAACCCAAGCCATGCCTTCATCGCACACAAGCCAGGTCATTTGTGCCTAGGATaGGGACTTCAAGGTGAGATA +
Preference number: 4 (lower is better)
Translates to: GWTSGLNPSHAFIAHKPGHLCLG*GLQGEI
Trigger: TATCTCACCTTGAAGTCCCCATCCTAGGCACAAATG...ACCTGGCTTGTGTGCGATGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp GGGTGGACATCTGGACTTAACCCAAGCCATGCCTTCATCGCACACAAGCCAGGTACCTACTGTGGGAGATaGCATTTGAATTCAACCTGG +
Preference number: 4 (lower is better)
Translates to: GWTSGLNPSHAFIAHKPGTYCGR*HLNSTW
Trigger: CCAGGTTGAATTCAAATGCCATCTCCCACAGTAGGT...ACCTGGCTTGTGTGCGATGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGGAAGCATCAAATGATTaGAGAGAGAGAGCAAAATGG +
Preference number: 4 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLEASND*RERAKW
Trigger: CCATTTTGCTCTCTCTCTTCAATCATTTGATGCTTC...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp GCCATGGAAGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCGTCATTGCTGGGAGATaGCATGTAAAGTTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: AMEESRGIQGKALNPKLFVIAGR*HVKFPD
Trigger: ATCAGGAAACTTTACATGGCATCTCCCAGCAATGAC...GAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCTTCCATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTCACATCTGCCTCAGGTaGCATGGAAGAGAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: YLMLNDELMGAARQHGTCHICLR*HGRESG
Trigger: CCCCGACTCTCTTCCATGGCACCTGAGGCAGATGTG...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGCACATGTATGTTTATTaGGGCACCATTCACAATAGC +
Preference number: 4 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLHMYVY*GTIHNS
Trigger: GCTATTGTGAATGGTGCCGCAATAAACATACATGTG...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CACACAAGCCAGGTAGCCGTCTACCAGGCTGAATCAGAGACAGGGAAGGAATCACTGCCCTCAGAGAGGTaGTACAGACTGAATATCTTA +
Preference number: 4 (lower is better)
Translates to: HTSQVAVYQAESETGKESLPSER*YRLNIL
Trigger: TAAGATATTCAGTCTGTACCACCTCTCTGAGGGCAG...TGATTCCTTCCCTGTCTCTGATTCAGCCTGGTAGACGGCTACCTGGCTTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp GGGTGGACATCTGGACTTAACCCAAGCCATGCCTTCATCGCACACAAGCCAGGTAAGGAAGACCTACTGTaGGAGATGGCATTTGAATTC +
Preference number: 4 (lower is better)
Translates to: GWTSGLNPSHAFIAHKPGKEDLL*EMAFEF
Trigger: GAATTCAAATGCCATCTCCCACAGTAGGTCTTCCTT...ACCTGGCTTGTGTGCGATGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATAGCCGTCTACCAGGCTaGATCAGAGACAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDSRLPG*IRDREG
Trigger: TCCTTCCCTGTCTCTGATTCAGCCTGGTAGACGGCT...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTAGCCGTCTACCAGGCTaGATCAGAGACAGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: YLMLNDELMGAARQHGTCSRLPG*IRDREG
Trigger: TCCTTCCCTGTCTCTGATTCAGCCTGGTAGACGGCT...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp GGGTGGACATCTGGACTTAACCCAAGCCATGCCTTCATCGCACACAAGCCAGGTGAAGCATCAAATGATTaGAGAGAGAGAGCAAAATGG +
Preference number: 4 (lower is better)
Translates to: GWTSGLNPSHAFIAHKPGEASND*RERAKW
Trigger: CCATTTTGCTCTCTCTCTTCAATCATTTGATGCTTC...ACCTGGCTTGTGTGCGATGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp CACACAAGCCAGGTAGCCGTCTACCAGGCTGAATCAGAGACAGGGAAGGAATCAGTCATTGCTGGGAGATaGCATGTAAAGTTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: HTSQVAVYQAESETGKESVIAGR*HVKFPD
Trigger: ATCAGGAAACTTTACATGGCATCTCCCAGCAATGAC...TGATTCCTTCCCTGTCTCTGATTCAGCCTGGTAGACGGCTACCTGGCTTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp GCCATGGAAGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCACATGTATGTTTATTaGGGCACCATTCACAATAGC +
Preference number: 4 (lower is better)
Translates to: AMEESRGIQGKALNPKLFHMYVY*GTIHNS
Trigger: GCTATTGTGAATGGTGCCGCAATAAACATACATGTG...GAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCTTCCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp AGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGTACAGCCACACAAGATaGAAGAATAATGATTCCAGT +
Preference number: 4 (lower is better)
Translates to: RESGYSGQGTQPQVVPGWYSHTR*KNNDSS
Trigger: ACTGGAATCATTATTCTTGCATCTTGTGTGGCTGTA...CCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CTGCCCTCAGAGAGGTGGTACAGACTGAATATCTTAATTGGGTCTAGGAGAATTCTGCCTCAGGTGCCATaGAAGAGAGTCGGGGTATTC +
Preference number: 4 (lower is better)
Translates to: LPSERWYRLNILIGSRRILPQVP*KRVGVF
Trigger: GAATACCCCGACTCTCTTCCATGGCACCTGAGGCAG...AATTCTCCTAGACCCAATTAAGATATTCAGTCTGTACCACCTCTCTGAGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp AGCACATCTGCCTCAGGTGCCATGGAAGAGAGTCGGGGTATTCAGGGCAAGGCATTGTCAAACAATGCCTaGACAAATGATGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: STSASGAMEESRGIQGKALSNNA*TNDGLE
Trigger: TTCAAGTCCATCATTTGTCCAGGCATTGTTTGACAA...TGCCTTGCCCTGAATACCCCGACTCTCTTCCATGGCACCTGAGGCAGATGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp AGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGTGGATTAAGAAAATGTaGCACATCTACACCATGGAA +
Preference number: 4 (lower is better)
Translates to: RESGYSGQGTQPQVVPGWWIKKM*HIYTME
Trigger: TTCCATGGTGTAGATGTGCCACATTTTCTTAATCCA...CCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGTGCTGGCTAAAAATATaGCTCTCTGTTAGGTACTAT +
Preference number: 4 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLCWLKI*LSVRYY
Trigger: ATAGTACCTAACAGAGAGCCATATTTTTAGCCAGCA...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGAGTGGGAACCACACGTaGTCAAGGCCTTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQSGNHT*SRPWPQ
Trigger: CTGTGGCCAAGGCCTTGAGCACGTGTGGTTCCCACT...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp GCCATGGAAGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCTTGTCAAACAATGCCTaGACAAATGATGGACTTGAA +
Preference number: 4 (lower is better)
Translates to: AMEESRGIQGKALNPKLFLSNNA*TNDGLE
Trigger: TTCAAGTCCATCATTTGTCCAGGCATTGTTTGACAA...GAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCTTCCATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CACACAAGCCAGGTAGCCGTCTACCAGGCTGAATCAGAGACAGGGAAGGAATCAAGGAAAGATGGGGTTTaGCAAATGGTGATAATGGTA +
Preference number: 4 (lower is better)
Translates to: HTSQVAVYQAESETGKESRKDGV*QMVIMV
Trigger: TACCATTATCACCATTTGCCAAACCCCATCTTTCCT...TGATTCCTTCCCTGTCTCTGATTCAGCCTGGTAGACGGCTACCTGGCTTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp GTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGGACTCCAACAATGGTAGACTaGATTAAGAAAATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: VFRARHSTPSCSRVDIWTPTMVD*IKKMWH
Trigger: GTGCCACATTTTCTTAATCCAGTCTACCATTGTTGG...AGTCCAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGAAATTTTAGGAGCCAGTaGATAGCACATCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: TATQDARIMIPVGRIREGNFRSQ*IAHLPQ
Trigger: CTGAGGCAGATGTGCTATTCACTGGCTCCTAAAATT...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGCACATCTGCCTCAGGTaGCATGGAAGAGAGTCGGGG +
Preference number: 4 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKHICLR*HGRESG
Trigger: CCCCGACTCTCTTCCATGGCACCTGAGGCAGATGTG...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGACAGTGGAGTCATTGCTaGGAGATGCCATGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: TATQDARIMIPVGRIREGQWSHC*EMPCKV
Trigger: AACTTTACATGGCATCTCCCAGCAATGACTCCACTG...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGTTCCTGCACAGTATCTaGGCCTGGCAGAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQFLHSI*AWQKAW
Trigger: CCATGCTTTCTGCCAGGCTCAGATACTGTGCAGGAA...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTGTGGGAGATGGCATTTaGATTCAACCTGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: YLMLNDELMGAARQHGTCVGDGI*IQPGRK
Trigger: CTTCCTACCAGGTTGAATTCAAATGCCATCTCCCAC...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATAGGATGGCTCATTTGTaGCTAGGATGGGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDRMAHL*LGWGLQ
Trigger: TTGAAGTCCCCATCCTAGGCACAAATGAGCCATCCT...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTCAAGTTGTTCCAGGGTaGACATCTGGACTTAACCCA +
Preference number: 4 (lower is better)
Translates to: YLMLNDELMGAARQHGTCQVVPG*TSGLNP
Trigger: TGGGTTAAGTCCAGATGTCCACCCTGGAACAACTTG...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CACACAAGCCAGGTAGCCGTCTACCAGGCTGAATCAGAGACAGGGAAGGAATCATCATTTTGGCTACAGTaGCAGAGAAAACAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: HTSQVAVYQAESETGKESSFWLQ*QRKQSL
Trigger: TAAACTTTGTTTTCTCTGCCACTGTAGCCAAAATGA...TGATTCCTTCCCTGTCTCTGATTCAGCCTGGTAGACGGCTACCTGGCTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGAAAGGAAGACCTACTGTaGGAGATGGCATTTGAATTC +
Preference number: 4 (lower is better)
Translates to: TATQDARIMIPVGRIREGKEDLL*EMAFEF
Trigger: GAATTCAAATGCCATCTCCCACAGTAGGTCTTCCTT...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTCCATGTAAAGTTTCCTaGTCAATCTGGAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: YLMLNDELMGAARQHGTCPCKVS*SIWRPS
Trigger: ACTGGGTCTCCAGATTGATCAGGAAACTTTACATGG...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGAGTGTTCATTGTTGCCTaGGATATTGAGAACAGAAGA +
Preference number: 4 (lower is better)
Translates to: TATQDARIMIPVGRIREGVFIVA*DIENRR
Trigger: TCTTCTGTTCTCAATATCTCAGGCAACAATGAACAC...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTAATTTTAGGAGCCAGTaGATAGCACATCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: YLMLNDELMGAARQHGTCNFRSQ*IAHLPQ
Trigger: CTGAGGCAGATGTGCTATTCACTGGCTCCTAAAATT...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATAAGAATAGAAAACGCTaGCCTCAGAGAGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDKNRKR*PQRGGT
Trigger: TGTACCACCTCTCTGAGGGCAGCGTTTTCTATTCTT...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp ACAGCCACACAAGATGCAAGAATAATGATTCCAGTCGGGAGGATCAGGGAAGGAGAATTGTTGACCATCTaGGGCATTGTTTTCGATCTT +
Preference number: 4 (lower is better)
Translates to: TATQDARIMIPVGRIREGELLTI*GIVFDL
Trigger: AAGATCGAAAACAATGCCCCAGATGGTCAACAATTC...TCCTTCCCTGATCCTCCCGACTGGAATCATTATTCTTGCATCTTGTGTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641156.1
CDS-3UTR CCA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTTGTCTGGGAAACTGTTaGCAGCTTTGCCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLACLGNC*QLCQPQ
Trigger: CTGTGGCTGGCAAAGCTGCCAACAGTTTCCCAGACA...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATTGTTGCCTGAGATATTaGGAACAGAAGAATCCGAAC +
Preference number: 4 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDCCLRY*EQKNPN
Trigger: GTTCGGATTCTTCTGTTCTCAATATCTCAGGCAACA...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGGTGGGAGATGGCATTTaGATTCAACCTGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQVGDGI*IQPGRK
Trigger: CTTCCTACCAGGTTGAATTCAAATGCCATCTCCCAC...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGCAAGTTGTTCCAGGGTaGACATCTGGACTTAACCCA +
Preference number: 4 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQQVVPG*TSGLNP
Trigger: TGGGTTAAGTCCAGATGTCCACCCTGGAACAACTTG...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATATGGTAAAAGAAGGCTaGTGTGAGAAGCATCAAATG +
Preference number: 4 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDMVKEG*CEKHQM
Trigger: CATTTGATGCTTCTCACATCAGCCTTCTTTTACCAT...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTAGGAAAGATGGGGTTTaGCAAATGGTGATAATGGTA +
Preference number: 4 (lower is better)
Translates to: YLMLNDELMGAARQHGTCRKDGV*QMVIMV
Trigger: TACCATTATCACCATTTGCCAAACCCCATCTTTCCT...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTCCAACAATGGTAGACTaGATTAAGAAAATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: YLMLNDELMGAARQHGTCPTMVD*IKKMWH
Trigger: GTGCCACATTTTCTTAATCCAGTCTACCATTGTTGG...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CAA 72 bp TATGTTTATTGCGGCACCATTCACAATAGCAAAGACTaGGAACCAAGCCAAATGTCCAACAATGGTAGACTG +
Preference number: 4 (lower is better)
Translates to: YVYCGTIHNSKD*EPSQMSNNGRL
Trigger: CAGTCTACCATTGTTGGACATTTGGCTTGGTTCCAAGTCTTTGCTATTGTGAATGGTGCCGCAATAAACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGCCATGTAAAGTTTCCTaGTCAATCTGGAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKPCKVS*SIWRPS
Trigger: ACTGGGTCTCCAGATTGATCAGGAAACTTTACATGG...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGTGTTGCCTGAGATATTaGGAACAGAAGAATCCGAAC +
Preference number: 4 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQCCLRY*EQKNPN
Trigger: GTTCGGATTCTTCTGTTCTCAATATCTCAGGCAACA...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGAAGAATAGAAAACGCTaGCCTCAGAGAGGTGGTACA +
Preference number: 4 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKKNRKR*PQRGGT
Trigger: TGTACCACCTCTCTGAGGGCAGCGTTTTCTATTCTT...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTTACAGCCACACAAGATaGAAGAATAATGATTCCAGT +
Preference number: 4 (lower is better)
Translates to: YLMLNDELMGAARQHGTCYSHTR*KNNDSS
Trigger: ACTGGAATCATTATTCTTGCATCTTGTGTGGCTGTA...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTCATTTGTGCCTAGGATaGGGACTTCAAGGTGAGATA +
Preference number: 4 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLAHLCLG*GLQGEI
Trigger: TATCTCACCTTGAAGTCCCCATCCTAGGCACAAATG...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGATGAGCAGCTCATTTTaGCTACAGTGGCAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQMSSSF*LQWQRK
Trigger: TTTTCTCTGCCACTGTAGCCAAAATGAGCTGCTCAT...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CTGCCCTCAGAGAGGTGGTACAGACTGAATATCTTAATTGGGTCTAGGAGAATTACACTTTTACACTGTTaGTGGCACTGTAAACTAGTT +
Preference number: 4 (lower is better)
Translates to: LPSERWYRLNILIGSRRITLLHC*WHCKLV
Trigger: AACTAGTTTACAGTGCCACCAACAGTGTAAAAGTGT...AATTCTCCTAGACCCAATTAAGATATTCAGTCTGTACCACCTCTCTGAGGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CTGCCCTCAGAGAGGTGGTACAGACTGAATATCTTAATTGGGTCTAGGAGAATTTGCTGGCTAAAAATATaGCTCTCTGTTAGGTACTAT +
Preference number: 4 (lower is better)
Translates to: LPSERWYRLNILIGSRRICWLKI*LSVRYY
Trigger: ATAGTACCTAACAGAGAGCCATATTTTTAGCCAGCA...AATTCTCCTAGACCCAATTAAGATATTCAGTCTGTACCACCTCTCTGAGGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATAGGTTCATTTTGTGCTaGCTAAAAATATGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDRFILC*LKIWLS
Trigger: AGAGAGCCATATTTTTAGCCAGCACAAAATGAACCT...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGGATGGACTTGAAATCTaGATTTGCATCCCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQDGLEI*ICIPKR
Trigger: TCTTTTGGGGATGCAAATTCAGATTTCAAGTCCATC...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
3UTR CAA 72 bp GACAGTTGTCAAACAATGCCTGGACAAATGATGGACTaGAAATCTGAATTTGCATCCCCAAAAGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: DSCQTMPGQMMD*KSEFASPKETD
Trigger: ATCTGTCTCTTTTGGGGATGCAAATTCAGATTTCAAGTCCATCATTTGTCCAGGCATTGTTTGACAACTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR TCA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTGAAATGAAGAATTGTTaGCCATCTGGGGCATTGTTT +
Preference number: 4 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLAEMKNC*PSGALF
Trigger: AAACAATGCCCCAGATGGTCAACAATTCTTCATTTC...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641156.1
CDS-3UTR TCA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTGTGTTCATTGTTGCCTaGGATATTGAGAACAGAAGA +
Preference number: 4 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLAVFIVA*DIENRR
Trigger: TCTTCTGTTCTCAATATCTCAGGCAACAATGAACAC...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGCTTTTACACTGTTGGTaGCACTGTAAACTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQLLHCW*HCKLVQ
Trigger: TTGAACTAGTTTACAGTGCCACCAACAGTGTAAAAG...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGAGGTTCATTTTGTGCTaGCTAAAAATATGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQRFILC*LKIWLS
Trigger: AGAGAGCCATATTTTTAGCCAGCACAAAATGAACCT...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR GCA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGTTTCGATCTTCAGTATaGCAACTCCATCAGTTCATA +
Preference number: 4 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKFRSSV*QLHQFI
Trigger: TATGAACTGATGGAGTTGGCATACTGAAGATCGAAA...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641156.1
CDS-3UTR CCA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGCTTTTACACTGTTGGTaGCACTGTAAACTAGTTCAA +
Preference number: 4 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKLLHCW*HCKLVQ
Trigger: TTGAACTAGTTTACAGTGCCACCAACAGTGTAAAAG...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGACACTTTTACACTGTTaGTGGCACTGTAAACTAGTT +
Preference number: 4 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKTLLHC*WHCKLV
Trigger: AACTAGTTTACAGTGCCACCAACAGTGTAAAAGTGT...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CCA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGTCATTTTGGCTACAGTaGCAGAGAAAACAAAGTTTA +
Preference number: 4 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKSFWLQ*QRKQSL
Trigger: TAAACTTTGTTTTCTCTGCCACTGTAGCCAAAATGA...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp AGCACATCTGCCTCAGGTGCCATGGAAGAGAGTCGGGGTATTCAGGGCAAGGCAACACACCGGGGACTGTaGTGGGTTAGGGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: STSASGAMEESRGIQGKATHRGL*WVRGSG
Trigger: CCCACTCCCCCTAACCCACAACAGTCCCCGGTGTGT...TGCCTTGCCCTGAATACCCCGACTCTCTTCCATGGCACCTGAGGCAGATGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp GGGTGGACATCTGGACTTAACCCAAGCCATGCCTTCATCGCACACAAGCCAGGTACAGCACCCTCGGCCTaGATCCTAAGCACAACTTTC +
Preference number: 5 (lower is better)
Translates to: GWTSGLNPSHAFIAHKPGTAPSA*ILSTTF
Trigger: GAAAGTTGTGCTTAGGATCAAGGCCGAGGGTGCTGT...ACCTGGCTTGTGTGCGATGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp GGGTGGACATCTGGACTTAACCCAAGCCATGCCTTCATCGCACACAAGCCAGGTATGTCTGGGAAACTGTaGGCAGCTTTGCCAGCCACA +
Preference number: 5 (lower is better)
Translates to: GWTSGLNPSHAFIAHKPGMSGKL*AALPAT
Trigger: TGTGGCTGGCAAAGCTGCCAACAGTTTCCCAGACAT...ACCTGGCTTGTGTGCGATGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp GTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGGACTATGTCTGGGAAACTGTaGGCAGCTTTGCCAGCCACA +
Preference number: 5 (lower is better)
Translates to: VFRARHSTPSCSRVDIWTMSGKL*AALPAT
Trigger: TGTGGCTGGCAAAGCTGCCAACAGTTTCCCAGACAT...AGTCCAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp AGAGAGTCGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGGATGAGTTCATGTCCTaGGTAGGGACATGGATGAAG +
Preference number: 5 (lower is better)
Translates to: RESGYSGQGTQPQVVPGWDEFMS*VGTWMK
Trigger: CTTCATCCATGTCCCTACCAAGGACATGAACTCATC...CCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCGACTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTCACGTGCTCAAGGCCTaGGCCACAGCACCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLAHVLKA*ATAPSA
Trigger: GGCCGAGGGTGCTGTGGCCAAGGCCTTGAGCACGTG...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGCACGTGCTCAAGGCCTaGGCCACAGCACCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKHVLKA*ATAPSA
Trigger: GGCCGAGGGTGCTGTGGCCAAGGCCTTGAGCACGTG...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp AGCACATCTGCCTCAGGTGCCATGGAAGAGAGTCGGGGTATTCAGGGCAAGGCAAGTAGGATAGTCCAGTaGGGACAGTTGTCAAACAAT +
Preference number: 5 (lower is better)
Translates to: STSASGAMEESRGIQGKASRIVQ*GQLSNN
Trigger: ATTGTTTGACAACTGTCCCAACTGGACTATCCTACT...TGCCTTGCCCTGAATACCCCGACTCTCTTCCATGGCACCTGAGGCAGATGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp CACACAAGCCAGGTAGCCGTCTACCAGGCTGAATCAGAGACAGGGAAGGAATCAGATGAGTTCATGTCCTaGGTAGGGACATGGATGAAG +
Preference number: 5 (lower is better)
Translates to: HTSQVAVYQAESETGKESDEFMS*VGTWMK
Trigger: CTTCATCCATGTCCCTACCAAGGACATGAACTCATC...TGATTCCTTCCCTGTCTCTGATTCAGCCTGGTAGACGGCTACCTGGCTTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp GGGTGGACATCTGGACTTAACCCAAGCCATGCCTTCATCGCACACAAGCCAGGTCACAATAGCAAAGACTaGGAACCAAGCCAAATGTCC +
Preference number: 5 (lower is better)
Translates to: GWTSGLNPSHAFIAHKPGHNSKD*EPSQMS
Trigger: GGACATTTGGCTTGGTTCCAAGTCTTTGCTATTGTG...ACCTGGCTTGTGTGCGATGAAGGCATGGCTTGGGTTAAGTCCAGATGTCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGTCTTGGCAAGATTCTTaGTTGCAGATTAGATCAGGA +
Preference number: 5 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLSWQDS*LQIRSG
Trigger: TCCTGATCTAATCTGCAACAAAGAATCTTGCCAAGA...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGGACTGTTTATATTCCTaGGAGATACTGAACTGTGTG +
Preference number: 5 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLDCLYS*EILNCV
Trigger: CACACAGTTCAGTATCTCCAAGGAATATAAACAGTC...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp CGGGGTATTCAGGGCAAGGCACTCAACCCCAAGTTGTTCCAGGGTGGACATCTGGGACAAATGATGGACTaGAAATCTGAATTTGCATCC +
Preference number: 5 (lower is better)
Translates to: RGIQGKALNPKLFQGGHLGQMMD*KSEFAS
Trigger: GGATGCAAATTCAGATTTCAAGTCCATCATTTGTCC...CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGCCTTGCCCTGAATACCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp GCAAGTCATTCAGCAAAGATAAGCTTCAGTACAAATGGAAGTAGGATAGTCCAGACACACCGGGGACTGTaGTGGGTTAGGGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: ASHSAKISFSTNGSRIVQTHRGL*WVRGSG
Trigger: CCCACTCCCCCTAACCCACAACAGTCCCCGGTGTGT...CTGGACTATCCTACTTCCATTTGTACTGAAGCTTATCTTTGCTGAATGACTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp CACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGAGATTCCTCAGGGATGCACTCAACCCCAAGTaGTTCCAGGGTGGACATCTG +
Preference number: 5 (lower is better)
Translates to: HCKLVQPLWKSVWRFLRDALNPK*FQGGHL
Trigger: CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGC...ATCCCTGAGGAATCTCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTGCACTCAACCCCAAGTaGTTCCAGGGTGGACATCTG +
Preference number: 5 (lower is better)
Translates to: YLMLNDELMGAARQHGTCALNPK*FQGGHL
Trigger: CAGATGTCCACCCTGGAACAACTTGGGGTTGAGTGC...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTAAACTGTTGGCAGCTTaGCCAGCCACAGCTCAGGAG +
Preference number: 5 (lower is better)
Translates to: YLMLNDELMGAARQHGTCKLLAA*PATAQE
Trigger: CTCCTGAGCTGTGGCTGGCAAAGCTGCCAACAGTTT...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTACAGCACCCTCGGCCTaGATCCTAAGCACAACTTTC +
Preference number: 5 (lower is better)
Translates to: YLMLNDELMGAARQHGTCTAPSA*ILSTTF
Trigger: GAAAGTTGTGCTTAGGATCAAGGCCGAGGGTGCTGT...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp CACACAAGCCAGGTAGCCGTCTACCAGGCTGAATCAGAGACAGGGAAGGAATCATTTTCCTTAGTGAAATaGAGGCCTCCTAATCTGAGA +
Preference number: 5 (lower is better)
Translates to: HTSQVAVYQAESETGKESFSLVK*RPPNLR
Trigger: TCTCAGATTAGGAGGCCTCAATTTCACTAAGGAAAA...TGATTCCTTCCCTGTCTCTGATTCAGCCTGGTAGACGGCTACCTGGCTTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641156.1
CDS-3UTR CAA 90 bp CACACAAGCCAGGTAGCCGTCTACCAGGCTGAATCAGAGACAGGGAAGGAATCAGACTGTTTATATTCCTaGGAGATACTGAACTGTGTG +
Preference number: 5 (lower is better)
Translates to: HTSQVAVYQAESETGKESDCLYS*EILNCV
Trigger: CACACAGTTCAGTATCTCCAAGGAATATAAACAGTC...TGATTCCTTCCCTGTCTCTGATTCAGCCTGGTAGACGGCTACCTGGCTTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp CACACAAGCCAGGTAGCCGTCTACCAGGCTGAATCAGAGACAGGGAAGGAATCATGGCAAGATTCTTTGTaGCAGATTAGATCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: HTSQVAVYQAESETGKESWQDSL*QIRSGK
Trigger: TTTTCCTGATCTAATCTGCAACAAAGAATCTTGCCA...TGATTCCTTCCCTGTCTCTGATTCAGCCTGGTAGACGGCTACCTGGCTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTAAACTGTTGGCAGCTTaGCCAGCCACAGCTCAGGAG +
Preference number: 5 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLAKLLAA*PATAQE
Trigger: CTCCTGAGCTGTGGCTGGCAAAGCTGCCAACAGTTT...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTAACAGGATGGCTCATTaGTGCCTAGGATGGGGACTT +
Preference number: 5 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLANRMAH*CLGWGL
Trigger: AAGTCCCCATCCTAGGCACAAATGAGCCATCCTGTT...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp TACCTAATGTTAAATGACGAGTTAATGGGTGCAGCACGCCAACATGGCACATGTAGTAGGATAGTCCAGTaGGGACAGTTGTCAAACAAT +
Preference number: 5 (lower is better)
Translates to: YLMLNDELMGAARQHGTCSRIVQ*GQLSNN
Trigger: ATTGTTTGACAACTGTCCCAACTGGACTATCCTACT...ACATGTGCCATGTTGGCGTGCTGCACCCATTAACTCGTCATTTAACATTAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp CCATCCCATTACTGGGTACATACCCAAAGGATTATAAATCATGCTGCTATAAAGCACAATAGCAAAGACTaGGAACCAAGCCAAATGTCC +
Preference number: 5 (lower is better)
Translates to: PSHYWVHTQRIINHAAIKHNSKD*EPSQMS
Trigger: GGACATTTGGCTTGGTTCCAAGTCTTTGCTATTGTG...CTTTATAGCAGCATGATTTATAATCCTTTGGGTATGTACCCAGTAATGGGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTGGACAAATGATGGACTaGAAATCTGAATTTGCATCC +
Preference number: 5 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLAGQMMD*KSEFAS
Trigger: GGATGCAAATTCAGATTTCAAGTCCATCATTTGTCC...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS-3UTR CAA 90 bp GACTGTCTCAATCCTAATGGTCTTCACTATATAAAGGTTCATTTTGTGCTGGCTTGGCAAGATTCTTTGTaGCAGATTAGATCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: DCLNPNGLHYIKVHFVLAWQDSL*QIRSGK
Trigger: TTTTCCTGATCTAATCTGCAACAAAGAATCTTGCCA...AGCCAGCACAAAATGAACCTTTATATAGTGAAGACCATTAGGATTGAGACAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641156.1
ENST00000641835.1
CDS CAA 72 bp ATGATTTTTCCTCCCTCTGAATTTTCCTTAGTGAAATaGAGGCCTCCTAATCTGAGAAATGAAGAATTGTTG +
Preference number: 6 (lower is better)
Translates to: MIFPPSEFSLVK*RPPNLRNEELL
Trigger: CAACAATTCTTCATTTCTCAGATTAGGAGGCCTCAATTTCACTAAGGAAAATTCAGAGGGAGGAAAAATCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641156.1