RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OR2AT4 (Homo sapiens)

Ensembl gene IDs: ENSG00000171561

Ensembl transcript IDs: ENST00000641504.1, ENST00000641541.1, ENST00000641593.1, ENST00000641931.1

Found 363 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATAGTAAAAACATGGATTCAACCTAGGTGCCCATCAGCGGTGGGCTaGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCAGTGTCTCA +
Preference number: 1 (lower is better)
Translates to: IVKTWIQPRCPSAVG*VKKIGPNMARRSVS
Trigger: TGAGACACTGCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCACCTAGGTTGAATCCATGTTTTTACTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR CCA 90 bp TGCACTCATATGTTCATTGCATTAGTATTCACAATAGTAAAAACATaGATTCAACCTAGGTGCCCATCAGCGGTGGGCTGGGTAAAGAAA +
Preference number: 1 (lower is better)
Translates to: CTHMFIALVFTIVKT*IQPRCPSAVGWVKK
Trigger: TTTCTTTACCCAGCCCACCGCTGATGGGCACCTAGGTTGAATCCATGTTTTTACTATTGTGAATACTAATGCAATGAACATATGAGTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCTCCCTGGCAGCCCCTaGGCTCTTTACTGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRLPGSP*ALYCLH
Trigger: ATGAAGACAGTAAAGAGCTCAGGGGCTGCCAGGGAG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCTGAGATCGTGCCATTaGACTCCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRLRSCH*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATGGCACGATCTCAG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCGTCATGCCACTAACTTaGGAGACAGCCAGGGTCAAG +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRVMPLT*ETARVK
Trigger: CTTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGAC...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTATACACTTCCAAGGGTaGACAGAACATTCACCAAGG +
Preference number: 2 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGIHFQG*TEHSPR
Trigger: CCTTGGTGAATGTTCTGTGCACCCTTGGAAGTGTAT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTCAAACCTCAGCATCATaGAATGTACCCATGTCACAA +
Preference number: 2 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGQTSAS*NVPMSQ
Trigger: TTGTGACATGGGTACATTTCATGATGCTGAGGTTTG...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTAGCCACTGTGGAAAGTaGTTTGGCAATTTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGSHCGK*FGNFSK
Trigger: CTTTGAGAAATTGCCAAACCACTTTCCACAGTGGCT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTCAAATGGTGCTGGAATaGTTGTATGTTCATATGCAC +
Preference number: 2 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGQMVLE*LYVHMH
Trigger: GTGCATATGAACATACAATCATTCCAGCACCATTTG...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGGCAGGAGAATCACTTaGACCTGGGAGGCGGAGGCT +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMGRRIT*TWEAEA
Trigger: AGCCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTAATAGAGCTATCATTTaGCCCAGCAATCTCATTACT +
Preference number: 2 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGNRAII*PSNLIT
Trigger: AGTAATGAGATTGCTGGGTCAAATGATAGCTCTATT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTGAAAATTCCAGGCCCTaGAAATTTTACAGGCAAATT +
Preference number: 2 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGENSRP*KFYRQI
Trigger: AATTTGCCTGTAAAATTTCCAGGGCCTGGAATTTTC...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCACAGAGGAAGTTAGGTaGAGGATATATGGGAACTCT +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRTEEVR*RIYGNS
Trigger: AGAGTTCCCATATATCCTTCACCTAACTTCCTCTGT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTGAGTCAAAGGGTAAATaGATATGTAATTTTGGTAGG +
Preference number: 2 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGESKGK*ICNFGR
Trigger: CCTACCAAAATTACATATGCATTTACCCTTTGACTC...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCTAAGCACTGTTATTTaGTGTCCTGGAAGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRLSTVI*CPGSRV
Trigger: AACTCTGCTTCCAGGACACCAAATAACAGTGCTTAG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCATCCCCCACCAGAGTaGTTACATTTGTTACATTCA +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRHPPPE*LHLLHS
Trigger: TGAATGTAACAAATGTAACCACTCTGGTGGGGGATG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCAAAAGAATGAAATCATaGATGCAGCTGGAGCCCATT +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRKRMKS*MQLEPI
Trigger: AATGGGCTCCAGCTGCATCCATGATTTCATTCTTTT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGTCATGCCACTAACTTaGGAGACAGCCAGGGTCAAG +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMVMPLT*ETARVK
Trigger: CTTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGAC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCAGGCTTTATCAAAATTaGAAACCTCTGCTCTGCAAA +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRRLYQN*KPLLCK
Trigger: TTTGCAGAGCAGAGGTTTTCAATTTTGATAAAGCCT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCTCTATACAATGTTTTTaGGAATGTAGAAGAGACGGG +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRSIQCF*ECRRDG
Trigger: CCCGTCTCTTCTACATTCTCAAAAACATTGTATAGA...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCAGGAGTAACAGAAAGTaGTTGGGAAAATCTTCCAAA +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRRSNRK*LGKSSK
Trigger: TTTGGAAGATTTTCCCAATCACTTTCTGTTACTCCT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGGTGGAAGGATCCCTTaGGCTCAGGAGTTTGAGACA +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMGGRIP*AQEFET
Trigger: TGTCTCAAACTCCTGAGCTCAAGGGATCCTTCCACC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCAGTGTTATACCAGTTTaGATCCTCACAAGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRSVIPV*ILTSKL
Trigger: TAACTTGCTTGTGAGGATGCAAACTGGTATAACACT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCCAGGAGGTCAAGGTTaGAGTGAACTGAGATCACGC +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMPGGQG*SELRSR
Trigger: GCGTGATCTCAGTTCACTGCAACCTTGACCTCCTGG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCCCATAGTATACACTTaGTGTAGTACATTCTATGAG +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRPIVYT*CSTFYE
Trigger: CTCATAGAATGTACTACACCAAGTGTATACTATGGG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGTAATCCCAGAACTTTaGGAGGCGGAGGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMVIPEL*EAEVEG
Trigger: TCCTTCCACCTCCGCCTCCCAAAGTTCTGGGATTAC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGACATACCTGTTAGAATaGCATCCCCCACCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMTYLLE*HPPPEW
Trigger: CCACTCTGGTGGGGGATGTCATTCTAACAGGTATGT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCGAGTCAAAGGGTAAATaGATATGTAATTTTGGTAGG +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRESKGK*ICNFGR
Trigger: CCTACCAAAATTACATATGCATTTACCCTTTGACTC...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGCTCAGGGAGCTGAGGTaGGAGGATCACTTGAGCCCT +
Preference number: 2 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYELRELR*EDHLSP
Trigger: AGGGCTCAAGTGATCCTCCCACCTCAGCTCCCTGAG...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCATTCTGATTGGATCCTaGAATGGAAAGAAGACATTA +
Preference number: 2 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRILIGS*NGKKTL
Trigger: TAATGTCTTCTTTCCATTCCAGGATCCAATCAGAAT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCCATCAGCGGTGGGCTaGGTAAAGAAAATTGGTCCA +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMPSAVG*VKKIGP
Trigger: TGGACCAATTTTCTTTACCCAGCCCACCGCTGATGG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCTCCCTGGCAGCCCCTaGGCTCTTTACTGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLLPGSP*ALYCLH
Trigger: ATGAAGACAGTAAAGAGCTCAGGGGCTGCCAGGGAG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAGGCAGGAGAATCACTTaGACCTGGGAGGCGGAGGCT +
Preference number: 2 (lower is better)
Translates to: IELSFDPAISLLGIYPKEGRRIT*TWEAEA
Trigger: AGCCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCC...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGAAATTGGTCCAAATATaGCCAGGCGCAGTGTCTCAC +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMKLVQI*PGAVSH
Trigger: GTGAGACACTGCGCCTGGCCATATTTGGACCAATTT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGGTCATGCCACTAACTTaGGAGACAGCCAGGGTCAAG +
Preference number: 2 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEVMPLT*ETARVK
Trigger: CTTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGAC...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGTGCAATGTGGCATTCTaGTTGGATCCTGGAATGGAA +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMCNVAF*LDPGME
Trigger: TTCCATTCCAGGATCCAATCAGAATGCCACATTGCA...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGATACACTTCCAAGGGTaGACAGAACATTCACCAAGG +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMIHFQG*TEHSPR
Trigger: CCTTGGTGAATGTTCTGTGCACCCTTGGAAGTGTAT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGAGCTGGCTAGCCATATaGAGAAGAATGAAACTGCAC +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMSWLAI*RRMKLH
Trigger: GTGCAGTTTCATTCTTCTGCATATGGCTAGCCAGCT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACTCCCTGGCAGCCCCTaGGCTCTTTACTGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVLPGSP*ALYCLH
Trigger: ATGAAGACAGTAAAGAGCTCAGGGGCTGCCAGGGAG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCTAAGCACTGTTATTTaGTGTCCTGGAAGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMLSTVI*CPGSRV
Trigger: AACTCTGCTTCCAGGACACCAAATAACAGTGCTTAG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCATCCCCCACCAGAGTaGTTACATTTGTTACATTCA +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMHPPPE*LHLLHS
Trigger: TGAATGTAACAAATGTAACCACTCTGGTGGGGGATG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAGTCATGCCACTAACTTaGGAGACAGCCAGGGTCAAG +
Preference number: 2 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVVMPLT*ETARVK
Trigger: CTTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGAC...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCTAAGCACTGTTATTTaGTGTCCTGGAAGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQLSTVI*CPGSRV
Trigger: AACTCTGCTTCCAGGACACCAAATAACAGTGCTTAG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGATTGGATCCTGGAATaGAAAGAAGACATTACTGGA +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMDWILE*KEDITG
Trigger: TCCAGTAATGTCTTCTTTCCATTCCAGGATCCAATC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGTTCTCACTTATAAGTaGGAGCTAAACATTGGGTAC +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMVLTYK*ELNIGY
Trigger: GTACCCAATGTTTAGCTCCCACTTATAAGTGAGAAC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGTGCAATGTGGCATTCTaGTTGGATCCTGGAATGGAA +
Preference number: 2 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLCNVAF*LDPGME
Trigger: TTCCATTCCAGGATCCAATCAGAATGCCACATTGCA...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGATTGACACATCATTATaGCCCAAAGCCCATAGTATA +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMIDTSL*PKAHSI
Trigger: TATACTATGGGCTTTGGGTCATAATGATGTGTCAAT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGAGGCTTTATCAAAATTaGAAACCTCTGCTCTGCAAA +
Preference number: 2 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMRLYQN*KPLLCK
Trigger: TTTGCAGAGCAGAGGTTTTCAATTTTGATAAAGCCT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACCATCAGCGGTGGGCTaGGTAAAGAAAATTGGTCCA +
Preference number: 2 (lower is better)
Translates to: IELSFDPAISLLGIYPKEPSAVG*VKKIGP
Trigger: TGGACCAATTTTCTTTACCCAGCCCACCGCTGATGG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGAGTGTTATACCAGTTTaGATCCTCACAAGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQSVIPV*ILTSKL
Trigger: TAACTTGCTTGTGAGGATGCAAACTGGTATAACACT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCTAAGCACTGTTATTTaGTGTCCTGGAAGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLLSTVI*CPGSRV
Trigger: AACTCTGCTTCCAGGACACCAAATAACAGTGCTTAG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACATGTCACAACCAAATaGGGTTCATCCCAGGAATGC +
Preference number: 2 (lower is better)
Translates to: IELSFDPAISLLGIYPKEHVTTK*GSSQEC
Trigger: GCATTCCTGGGATGAACCCCATTTGGTTGTGACATG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACATGTCACAACCAAATaGGGTTCATCCCAGGAATGC +
Preference number: 2 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVHVTTK*GSSQEC
Trigger: GCATTCCTGGGATGAACCCCATTTGGTTGTGACATG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTATGCAATGTGGCATTCTaGTTGGATCCTGGAATGGAA +
Preference number: 2 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVCNVAF*LDPGME
Trigger: TTCCATTCCAGGATCCAATCAGAATGCCACATTGCA...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAATACACTTCCAAGGGTaGACAGAACATTCACCAAGG +
Preference number: 2 (lower is better)
Translates to: IELSFDPAISLLGIYPKEIHFQG*TEHSPR
Trigger: CCTTGGTGAATGTTCTGTGCACCCTTGGAAGTGTAT...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGGATTGGATCCTGGAATaGAAAGAAGACATTACTGGA +
Preference number: 2 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLDWILE*KEDITG
Trigger: TCCAGTAATGTCTTCTTTCCATTCCAGGATCCAATC...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGATGTGGCATTCTGATTaGATCCTGGAATGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLMWHSD*ILEWKE
Trigger: TTCTTTCCATTCCAGGATCCAATCAGAATGCCACAT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGATGTGGCATTCTGATTaGATCCTGGAATGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEMWHSD*ILEWKE
Trigger: TTCTTTCCATTCCAGGATCCAATCAGAATGCCACAT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGAGTGTTATACCAGTTTaGATCCTCACAAGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLSVIPV*ILTSKL
Trigger: TAACTTGCTTGTGAGGATGCAAACTGGTATAACACT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACATCCCCCACCAGAGTaGTTACATTTGTTACATTCA +
Preference number: 2 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVHPPPE*LHLLHS
Trigger: TGAATGTAACAAATGTAACCACTCTGGTGGGGGATG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACAAATGGTGCTGGAATaGTTGTATGTTCATATGCAC +
Preference number: 2 (lower is better)
Translates to: IELSFDPAISLLGIYPKEQMVLE*LYVHMH
Trigger: GTGCATATGAACATACAATCATTCCAGCACCATTTG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGAATTTTGGTAGGTATTaGGGTAGTGTTATACCAGTT +
Preference number: 2 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLNFGRY*GSVIPV
Trigger: AACTGGTATAACACTACCGCAATACCTACCAAAATT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGGAGTCAAAGGGTAAATaGATATGTAATTTTGGTAGG +
Preference number: 2 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLESKGK*ICNFGR
Trigger: CCTACCAAAATTACATATGCATTTACCCTTTGACTC...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAGATTGGATCCTGGAATaGAAAGAAGACATTACTGGA +
Preference number: 2 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVDWILE*KEDITG
Trigger: TCCAGTAATGTCTTCTTTCCATTCCAGGATCCAATC...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGATTCTGATTGGATCCTaGAATGGAAAGAAGACATTA +
Preference number: 2 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEILIGS*NGKKTL
Trigger: TAATGTCTTCTTTCCATTCCAGGATCCAATCAGAAT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAATGTGGCATTCTGATTaGATCCTGGAATGGAAAGAA +
Preference number: 2 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVMWHSD*ILEWKE
Trigger: TTCTTTCCATTCCAGGATCCAATCAGAATGCCACAT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGGTAACCTTTTTAGATTaGCTTCTTTCACTTAGCCAT +
Preference number: 2 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEVTFLD*LLSLSH
Trigger: ATGGCTAAGTGAAAGAAGCCAATCTAAAAAGGTTAC...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGGTAACCTTTTTAGATTaGCTTCTTTCACTTAGCCAT +
Preference number: 2 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLVTFLD*LLSLSH
Trigger: ATGGCTAAGTGAAAGAAGCCAATCTAAAAAGGTTAC...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAATTGACACATCATTATaGCCCAAAGCCCATAGTATA +
Preference number: 2 (lower is better)
Translates to: IELSFDPAISLLGIYPKEIDTSL*PKAHSI
Trigger: TATACTATGGGCTTTGGGTCATAATGATGTGTCAAT...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAATTGACACATCATTATaGCCCAAAGCCCATAGTATA +
Preference number: 2 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVIDTSL*PKAHSI
Trigger: TATACTATGGGCTTTGGGTCATAATGATGTGTCAAT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR TCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTATCTATACAATGTTTTTaGGAATGTAGAAGAGACGGG +
Preference number: 2 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVSIQCF*ECRRDG
Trigger: CCCGTCTCTTCTACATTCTCAAAAACATTGTATAGA...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAAGTGTTATACCAGTTTaGATCCTCACAAGCAAGTTA +
Preference number: 2 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVSVIPV*ILTSKL
Trigger: TAACTTGCTTGTGAGGATGCAAACTGGTATAACACT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAGAAAATTCCAGGCCCTaGAAATTTTACAGGCAAATT +
Preference number: 2 (lower is better)
Translates to: IELSFDPAISLLGIYPKEENSRP*KFYRQI
Trigger: AATTTGCCTGTAAAATTTCCAGGGCCTGGAATTTTC...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAGAAAATTCCAGGCCCTaGAAATTTTACAGGCAAATT +
Preference number: 2 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVENSRP*KFYRQI
Trigger: AATTTGCCTGTAAAATTTCCAGGGCCTGGAATTTTC...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR GCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACTATCAAAAGACACATaGACTCATATGTTCATTGCA +
Preference number: 2 (lower is better)
Translates to: IELSFDPAISLLGIYPKELSKDT*THMFIA
Trigger: TGCAATGAACATATGAGTGCATGTGTCTTTTGATAG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAATTCTGATTGGATCCTaGAATGGAAAGAAGACATTA +
Preference number: 2 (lower is better)
Translates to: IELSFDPAISLLGIYPKEILIGS*NGKKTL
Trigger: TAATGTCTTCTTTCCATTCCAGGATCCAATCAGAAT...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTGGTCATGCCACTAACTaGAGAGACAGCCAGGGTCAA +
Preference number: 3 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGGHATN*RDSQGQ
Trigger: TTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGACC...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR CCA 72 bp ACATGGATTCAACCTAGGTGCCCATCAGCGGTGGGCTaGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGC +
Preference number: 3 (lower is better)
Translates to: TWIQPRCPSAVG*VKKIGPNMARR
Trigger: GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCACCTAGGTTGAATCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCGCTAAGCACTGTTATTaGGTGTCCTGGAAGCAGAGT +
Preference number: 3 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRAKHCY*VSWKQS
Trigger: ACTCTGCTTCCAGGACACCAAATAACAGTGCTTAGC...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTAAAATTCGTGTGAAGTaGCTAATGCAGGAGCTATTG +
Preference number: 3 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGKIRVK*LMQELL
Trigger: CAATAGCTCCTGCATTAGCAACTTCACACGAATTTT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTACTGTCTTCATAGTTTaGCCTTTTCCAGAATGTCAT +
Preference number: 3 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGTVFIV*PFPECH
Trigger: ATGACATTCTGGAAAAGGCAAAACTATGAAGACAGT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCTACATATGTCTAGACTaGCTTCCATTCTGGTCCTCT +
Preference number: 3 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRYICLD*LPFWSS
Trigger: AGAGGACCAGAATGGAAGCAAGTCTAGACATATGTA...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCTGGTTATGTAAGATGTaGACACAGAGGAAGTTAGGT +
Preference number: 3 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRWLCKM*TQRKLG
Trigger: ACCTAACTTCCTCTGTGTCAACATCTTACATAACCA...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCACATTCAAGCCTACATaGACACATCATTATGACCCA +
Preference number: 3 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRTFKPT*THHYDP
Trigger: TGGGTCATAATGATGTGTCAATGTAGGCTTGAATGT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGGTCATGCCACTAACTaGAGAGACAGCCAGGGTCAA +
Preference number: 3 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMGHATN*RDSQGQ
Trigger: TTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGACC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCACTGTCTTCATAGTTTaGCCTTTTCCAGAATGTCAT +
Preference number: 3 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRTVFIV*PFPECH
Trigger: ATGACATTCTGGAAAAGGCAAAACTATGAAGACAGT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGCTAAGCACTGTTATTaGGTGTCCTGGAAGCAGAGT +
Preference number: 3 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMAKHCY*VSWKQS
Trigger: ACTCTGCTTCCAGGACACCAAATAACAGTGCTTAGC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCTTGAGCTCAGGAGTTaGAGACACTTGGGCAACATA +
Preference number: 3 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMLELRS*RHLGNI
Trigger: TATGTTGCCCAAGTGTCTCAAACTCCTGAGCTCAAG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR TCA 72 bp GTGACGGGATCATTCATATCCCAAACCTCAGCATCATaGAATGTACCCATGTCACAAACCTGCATGTGTACC +
Preference number: 3 (lower is better)
Translates to: VTGSFISQTSAS*NVPMSQTCMCT
Trigger: GGTACACATGCAGGTTTGTGACATGGGTACATTTCATGATGCTGAGGTTTGGGATATGAATGATCCCGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGGCTAAGCACTGTTATTaGGTGTCCTGGAAGCAGAGT +
Preference number: 3 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQAKHCY*VSWKQS
Trigger: ACTCTGCTTCCAGGACACCAAATAACAGTGCTTAGC...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR GCA 72 bp GTATTCACAATAGTAAAAACATGGATTCAACCTAGGTaGCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGT +
Preference number: 3 (lower is better)
Translates to: VFTIVKTWIQPR*PSAVGWVKKIG
Trigger: ACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCACCTAGGTTGAATCCATGTTTTTACTATTGTGAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR CCA 72 bp ATGTTCATTGCATTAGTATTCACAATAGTAAAAACATaGATTCAACCTAGGTGCCCATCAGCGGTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: MFIALVFTIVKT*IQPRCPSAVGW
Trigger: CCAGCCCACCGCTGATGGGCACCTAGGTTGAATCCATGTTTTTACTATTGTGAATACTAATGCAATGAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGTACATATGTCTAGACTaGCTTCCATTCTGGTCCTCT +
Preference number: 3 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQYICLD*LPFWSS
Trigger: AGAGGACCAGAATGGAAGCAAGTCTAGACATATGTA...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCCAGAGTGGTTACATTaGTTACATTCAAGCCTACAT +
Preference number: 3 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMPEWLH*LHSSLH
Trigger: ATGTAGGCTTGAATGTAACAAATGTAACCACTCTGG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGAAAATTCGTGTGAAGTaGCTAATGCAGGAGCTATTG +
Preference number: 3 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMKIRVK*LMQELL
Trigger: CAATAGCTCCTGCATTAGCAACTTCACACGAATTTT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGTCTCCTTCCTGTTCCTaGCCTCTCCTTATAGATAAC +
Preference number: 3 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLSPSCS*PLLIDN
Trigger: GTTATCTATAAGGAGAGGCAAGGAACAGGAAGGAGA...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGTCTCCTTCCTGTTCCTaGCCTCTCCTTATAGATAAC +
Preference number: 3 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYESPSCS*PLLIDN
Trigger: GTTATCTATAAGGAGAGGCAAGGAACAGGAAGGAGA...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGTACATATGTCTAGACTaGCTTCCATTCTGGTCCTCT +
Preference number: 3 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLYICLD*LPFWSS
Trigger: AGAGGACCAGAATGGAAGCAAGTCTAGACATATGTA...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR TCA 72 bp CTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTaGGAGACAGCCAGGGTCAAGTGCTTCTGTTTATTT +
Preference number: 3 (lower is better)
Translates to: LTVIFFVVMPLT*ETARVKCFCLF
Trigger: AAATAAACAGAAGCACTTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR TCA 72 bp GAATGGCTATCATTAAAGTCAAAGAAGAACAGGTGCTaGCCAGGCTGTAGAGAAAATGGAATGCTTATACAC +
Preference number: 3 (lower is better)
Translates to: EWLSLKSKKNRC*PGCRENGMLIH
Trigger: GTGTATAAGCATTCCATTTTCTCTACAGCCTGGTCAGCACCTGTTCTTCTTTGACTTTAATGATAGCCATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTATCTCCTTCCTGTTCCTaGCCTCTCCTTATAGATAAC +
Preference number: 3 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVSPSCS*PLLIDN
Trigger: GTTATCTATAAGGAGAGGCAAGGAACAGGAAGGAGA...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAATCTCCTTCCTGTTCCTaGCCTCTCCTTATAGATAAC +
Preference number: 3 (lower is better)
Translates to: IELSFDPAISLLGIYPKESPSCS*PLLIDN
Trigger: GTTATCTATAAGGAGAGGCAAGGAACAGGAAGGAGA...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGTGGTTATGTAAGATGTaGACACAGAGGAAGTTAGGT +
Preference number: 3 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLWLCKM*TQRKLG
Trigger: ACCTAACTTCCTCTGTGTCAACATCTTACATAACCA...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR GCA 72 bp ATCCCTAGAAGTGATACTGCTGAGTCAAAGGGTAAATaGATATGTAATTTTGGTAGGTATTGCGGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: IPRSDTAESKGK*ICNFGRYCGSV
Trigger: AACACTACCGCAATACCTACCAAAATTACATATGCATTTACCCTTTGACTCAGCAGTATCACTTCTAGGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGAATGCATATGTAATTTaGGTAGGTATTGCGGTAGTG +
Preference number: 3 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYENAYVI*VGIAVV
Trigger: CACTACCGCAATACCTACCAAAATTACATATGCATT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGAATGCATATGTAATTTaGGTAGGTATTGCGGTAGTG +
Preference number: 3 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLNAYVI*VGIAVV
Trigger: CACTACCGCAATACCTACCAAAATTACATATGCATT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGACTGTCTTCATAGTTTaGCCTTTTCCAGAATGTCAT +
Preference number: 3 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLTVFIV*PFPECH
Trigger: ATGACATTCTGGAAAAGGCAAAACTATGAAGACAGT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTATGGTTATGTAAGATGTaGACACAGAGGAAGTTAGGT +
Preference number: 3 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVWLCKM*TQRKLG
Trigger: ACCTAACTTCCTCTGTGTCAACATCTTACATAACCA...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAACATTCAAGCCTACATaGACACATCATTATGACCCA +
Preference number: 3 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVTFKPT*THHYDP
Trigger: TGGGTCATAATGATGTGTCAATGTAGGCTTGAATGT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACCAGAGTGGTTACATTaGTTACATTCAAGCCTACAT +
Preference number: 3 (lower is better)
Translates to: IELSFDPAISLLGIYPKEPEWLH*LHSSLH
Trigger: ATGTAGGCTTGAATGTAACAAATGTAACCACTCTGG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR-3UTR CAA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAACTGTCTTCATAGTTTaGCCTTTTCCAGAATGTCAT +
Preference number: 3 (lower is better)
Translates to: IELSFDPAISLLGIYPKETVFIV*PFPECH
Trigger: ATGACATTCTGGAAAAGGCAAAACTATGAAGACAGT...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR CCA 72 bp AGACACTGTAAGCGAATTCAAAGGCTAGTCATTGACTaGGGAAACTACTTGTATATCAAATATCTAATAATG +
Preference number: 3 (lower is better)
Translates to: RHCKRIQRLVID*GNYLYIKYLIM
Trigger: CATTATTAGATATTTGATATACAAGTAGTTTCCCCAGTCAATGACTAGCCTTTGAATTCGCTTACAGTGTCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR CCA 72 bp ACTTCGTTTTCTATAGGGCAAAATCTGCATGACCTTTaGTTTGGTGATGAGTATTTAGATATGTTATCAAAC +
Preference number: 3 (lower is better)
Translates to: TSFSIGQNLHDL*FGDEYLDMLSN
Trigger: GTTTGATAACATATCTAAATACTCATCACCAAACCAAAGGTCATGCAGATTTTGCCCTATAGAAAACGAAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR CCA 72 bp GAATGTAAATTAGTTCAGCCACTGTGGAAAGTGGTTTaGCAATTTCTCAAAGAACATAAAATAGAGCTATCA +
Preference number: 3 (lower is better)
Translates to: ECKLVQPLWKVV*QFLKEHKIELS
Trigger: TGATAGCTCTATTTTATGTTCTTTGAGAAATTGCCAAACCACTTTCCACAGTGGCTGAACTAATTTACATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTCTGAGATCACGCCACTaGCTTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGLRSRH*LPAWAT
Trigger: TGTCGCCCAGGCTGGAAGGCAGTGGCGTGATCTCAG...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTCTCGGGAGGCTGGGGTaGGAAGATTGCTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGLGRLG*EDCLGP
Trigger: TGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAG...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTCTCCTTGAGCTCTCCTaGACCAGCTCTGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGLLELS*TSSATL
Trigger: GAGAGTGGCAGAGCTGGTCCAGGAGAGCTCAAGGAG...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTGTCATGCCACTAACTTaGGAGACAGCCAGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGVMPLT*ETARVK
Trigger: CTTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGAC...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTGGTGGAAGGATCCCTTaGGCTCAGGAGTTTGAGACA +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGGGRIP*AQEFET
Trigger: TGTCTCAAACTCCTGAGCTCAAGGGATCCTTCCACC...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCTCGGGAGGCTGGGGTaGGAAGATTGCTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRLGRLG*EDCLGP
Trigger: TGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTGTAATCCCAGAACTTTaGGAGGCGGAGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGVIPEL*EAEVEG
Trigger: TCCTTCCACCTCCGCCTCCCAAAGTTCTGGGATTAC...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTCTGTGGCATCCATTGTaGGACACAGCTGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGLWHPL*DTAGFL
Trigger: GAGAAATCCAGCTGTGTCTCACAATGGATGCCACAG...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCTCAGGGAGCTGAGGTaGGAGGATCACTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRLRELR*EDHLSP
Trigger: AGGGCTCAAGTGATCCTCCCACCTCAGCTCCCTGAG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCGTCCTTCTAGGGAACTaGTGCGAAGCACTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRVLLGN*CEALRP
Trigger: TGGCCTCAGTGCTTCGCATCAGTTCCCTAGAAGGAC...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTCATGTCACAACCAAATaGGGTTCATCCCAGGAATGC +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGHVTTK*GSSQEC
Trigger: GCATTCCTGGGATGAACCCCATTTGGTTGTGACATG...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCGGTGGAAGGATCCCTTaGGCTCAGGAGTTTGAGACA +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRGGRIP*AQEFET
Trigger: TGTCTCAAACTCCTGAGCTCAAGGGATCCTTCCACC...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTCATTTAAAGGTCAAATaGTCCTGTCACAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGHLKVK*SCHSLG
Trigger: ACCCAGGCTGTGACAGGAGCATTTGACCTTTAAATG...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCAGGTGTCTGGACTTCTaGTCCTTGAGCTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRRCLDF*SLSSPG
Trigger: TCCAGGAGAGCTCAAGGAGCAGAAGTCCAGACACCT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTAGGCTGTGTGTACTATaGAGCTGCTCACACTCTTAT +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGRLCVL*SCSHSY
Trigger: ATAAGAGTGTGAGCAGCTGCATAGTACACACAGCCT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTAGCTGGCTAGCCATATaGAGAAGAATGAAACTGCAC +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGSWLAI*RRMKLH
Trigger: GTGCAGTTTCATTCTTCTGCATATGGCTAGCCAGCT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTATTGTGAGACACAGCTaGATTTCTCAGAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGIVRHS*ISQRWA
Trigger: TGCCCATCTCTGAGAAATCCAGCTGTGTCTCACAAT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTGTATCTACTCAATCCTaGTCCGCCTTGATGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGVSTQS*SALMSC
Trigger: ACAAGACATCAAGGCGGACCAGGATTGAGTAGATAC...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641541.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTCTGGGTAAAGAAAATTaGTCCAAATATGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGLGKEN*SKYGQA
Trigger: CGCCTGGCCATATTTGGACCAATTTTCTTTACCCAG...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCTGTGGCATCCATTGTaGGACACAGCTGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRLWHPL*DTAGFL
Trigger: GAGAAATCCAGCTGTGTCTCACAATGGATGCCACAG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTACAGAGGAAGTTAGGTaGAGGATATATGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGTEEVR*RIYGNS
Trigger: AGAGTTCCCATATATCCTTCACCTAACTTCCTCTGT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTAGGCATCACATTACCTaGCTTGAAACTCTAAGGCTA +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGRHHIT*LETLRL
Trigger: TAGCCTTAGAGTTTCAAGTCAGGTAATGTGATGCCT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTCTAAGCACTGTTATTTaGTGTCCTGGAAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGLSTVI*CPGSRV
Trigger: AACTCTGCTTCCAGGACACCAAATAACAGTGCTTAG...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCGCTCCTGTCACAGCCTaGGTCTTGAGACATGATTTT +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRAPVTA*VLRHDF
Trigger: AAAATCATGTCTCAAGACCCAGGCTGTGACAGGAGC...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTGTTCTCACTTATAAGTaGGAGCTAAACATTGGGTAC +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGVLTYK*ELNIGY
Trigger: GTACCCAATGTTTAGCTCCCACTTATAAGTGAGAAC...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCAAATTGGTCCAAATATaGCCAGGCGCAGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRKLVQI*PGAVSH
Trigger: GTGAGACACTGCGCCTGGCCATATTTGGACCAATTT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCTGCAATGTGGCATTCTaGTTGGATCCTGGAATGGAA +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRCNVAF*LDPGME
Trigger: TTCCATTCCAGGATCCAATCAGAATGCCACATTGCA...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTAGGAGTAACAGAAAGTaGTTGGGAAAATCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGRSNRK*LGKSSK
Trigger: TTTGGAAGATTTTCCCAATCACTTTCTGTTACTCCT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCATTTAAAGGTCAAATaGTCCTGTCACAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRHLKVK*SCHSLG
Trigger: ACCCAGGCTGTGACAGGAGCATTTGACCTTTAAATG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTAGTGTTATACCAGTTTaGATCCTCACAAGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGSVIPV*ILTSKL
Trigger: TAACTTGCTTGTGAGGATGCAAACTGGTATAACACT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCATACACTTCCAAGGGTaGACAGAACATTCACCAAGG +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRIHFQG*TEHSPR
Trigger: CCTTGGTGAATGTTCTGTGCACCCTTGGAAGTGTAT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCAGCTGGCTAGCCATATaGAGAAGAATGAAACTGCAC +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRSWLAI*RRMKLH
Trigger: GTGCAGTTTCATTCTTCTGCATATGGCTAGCCAGCT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCATTGTGAGACACAGCTaGATTTCTCAGAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRIVRHS*ISQRWA
Trigger: TGCCCATCTCTGAGAAATCCAGCTGTGTCTCACAAT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCGTATCTACTCAATCCTaGTCCGCCTTGATGTCTTGT +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRVSTQS*SALMSC
Trigger: ACAAGACATCAAGGCGGACCAGGATTGAGTAGATAC...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641541.1
ENST00000641931.1
CDS-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCTTTTCCCATCAATCCTaGTCCGCCTTGATGTCTTGT +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRFSHQS*SALMSC
Trigger: ACAAGACATCAAGGCGGACCAGGATTGATGGGAAAA...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641593.1
CDS-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGCCACTCTCTTGCTGTaGTGCTGGGTCTCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMATLLL*CWVSEP
Trigger: AGGCTCAGAGACCCAGCATCACAGCAAGAGAGTGGC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGTGGACTTCTGCTCCTTaGGCTCTCCTGGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMWTSAP*ALLDQL
Trigger: GAGCTGGTCCAGGAGAGCTCAAGGAGCAGAAGTCCA...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCTTTCTTGTATGCCTTaGCTAGTGGTTCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRLSCMP*LVVLSD
Trigger: GTCAGAAAGAACCACTAGTCAAGGCATACAAGAAAG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCAAACCTCAGCATCATaGAATGTACCCATGTCACAA +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRQTSAS*NVPMSQ
Trigger: TTGTGACATGGGTACATTTCATGATGCTGAGGTTTG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCAGGCATCACATTACCTaGCTTGAAACTCTAAGGCTA +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRRHHIT*LETLRL
Trigger: TAGCCTTAGAGTTTCAAGTCAGGTAATGTGATGCCT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCTCAACAACACTAAAATaGCCATACTGCCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRSTTLK*PYCPQQ
Trigger: TTGCTGTGGGCAGTATGGTCATTTTAGTGTTGTTGA...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCTGGAAGAGGTACATCTaGAGTAAGCAGGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRWKRYI*SKQEEK
Trigger: CTTTTCTTCCTGCTTACTGCAGATGTACCTCTTCCA...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCTCAGGGAGCTGAGGTaGGAGGATCACTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMLRELR*EDHLSP
Trigger: AGGGCTCAAGTGATCCTCCCACCTCAGCTCCCTGAG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGGCCACTCTCTTGCTGTaGTGCTGGGTCTCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQATLLL*CWVSEP
Trigger: AGGCTCAGAGACCCAGCATCACAGCAAGAGAGTGGC...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCTCCCTGGCAGCCCCTaGGCTCTTTACTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMLPGSP*ALYCLH
Trigger: ATGAAGACAGTAAAGAGCTCAGGGGCTGCCAGGGAG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCAAATGGTGCTGGAATaGTTGTATGTTCATATGCAC +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRQMVLE*LYVHMH
Trigger: GTGCATATGAACATACAATCATTCCAGCACCATTTG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCTCCTGGACCAGCTCTaGCACTCTCTTGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMLLDQL*HSLAVM
Trigger: CATCACAGCAAGAGAGTGGCAGAGCTGGTCCAGGAG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCTCCTTGAGCTCTCCTaGACCAGCTCTGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQLLELS*TSSATL
Trigger: GAGAGTGGCAGAGCTGGTCCAGGAGAGCTCAAGGAG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCTTAGTTCAGCCACTGTaGAAAGTGGTTTGGCAATTT +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRLVQPL*KVVWQF
Trigger: AAATTGCCAAACCACTTTCCACAGTGGCTGAACTAA...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGGTCCTTCTAGGGAACTaGTGCGAAGCACTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQVLLGN*CEALRP
Trigger: TGGCCTCAGTGCTTCGCATCAGTTCCCTAGAAGGAC...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGAAGGTTGCAGTGAACTaGGATCACGCCACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMKVAVN*DHATAF
Trigger: GAAGGCAGTGGCGTGATCTCAGTTCACTGCAACCTT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCTGGCAGAGAGGGGATaGCCAATAGATAGAAGACGG +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMLAERG*PIDRRR
Trigger: CCGTCTTCTATCTATTGGGCATCCCCTCTCTGCCAG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCTCCTGGACCAGCTCTaGCACTCTCTTGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQLLDQL*HSLAVM
Trigger: CATCACAGCAAGAGAGTGGCAGAGCTGGTCCAGGAG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGAGGTGTCTGGACTTCTaGTCCTTGAGCTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMRCLDF*SLSSPG
Trigger: TCCAGGAGAGCTCAAGGAGCAGAAGTCCAGACACCT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGCTGAGATCACGCCACTaGCTTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYELRSRH*LPAWAT
Trigger: TGTCGCCCAGGCTGGAAGGCAGTGGCGTGATCTCAG...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCTGAGATCACGCCACTaGCTTCCAGCCTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLLRSRH*LPAWAT
Trigger: TGTCGCCCAGGCTGGAAGGCAGTGGCGTGATCTCAG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCGAAAATTCCAGGCCCTaGAAATTTTACAGGCAAATT +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRENSRP*KFYRQI
Trigger: AATTTGCCTGTAAAATTTCCAGGGCCTGGAATTTTC...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCTCGGGAGGCTGGGGTaGGAAGATTGCTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLLGRLG*EDCLGP
Trigger: TGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGGCCACTCTCTTGCTGTaGTGCTGGGTCTCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEATLLL*CWVSEP
Trigger: AGGCTCAGAGACCCAGCATCACAGCAAGAGAGTGGC...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGTGGACTTCTGCTCCTTaGGCTCTCCTGGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEWTSAP*ALLDQL
Trigger: GAGCTGGTCCAGGAGAGCTCAAGGAGCAGAAGTCCA...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGAAGGTTGCAGTGAACTaGGATCACGCCACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQKVAVN*DHATAF
Trigger: GAAGGCAGTGGCGTGATCTCAGTTCACTGCAACCTT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCTGGCAGAGAGGGGATaGCCAATAGATAGAAGACGG +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQLAERG*PIDRRR
Trigger: CCGTCTTCTATCTATTGGGCATCCCCTCTCTGCCAG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCTATCAAAAGACACATaGACTCATATGTTCATTGCA +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRLSKDT*THMFIA
Trigger: TGCAATGAACATATGAGTGCATGTGTCTTTTGATAG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCTCAGGGAGCTGAGGTaGGAGGATCACTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLLRELR*EDHLSP
Trigger: AGGGCTCAAGTGATCCTCCCACCTCAGCTCCCTGAG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCGATGAAACAAAGAAATaGACAAACATTCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRDETKK*TNIPCS
Trigger: TGAGCATGGAATGTTTGTCCATTTCTTTGTTTCATC...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCTGTGGCATCCATTGTaGGACACAGCTGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQLWHPL*DTAGFL
Trigger: GAGAAATCCAGCTGTGTCTCACAATGGATGCCACAG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGGTCCTTCTAGGGAACTaGTGCGAAGCACTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLVLLGN*CEALRP
Trigger: TGGCCTCAGTGCTTCGCATCAGTTCCCTAGAAGGAC...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGGTCCTTCTAGGGAACTaGTGCGAAGCACTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEVLLGN*CEALRP
Trigger: TGGCCTCAGTGCTTCGCATCAGTTCCCTAGAAGGAC...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGCTCCTGTCACAGCCTaGGTCTTGAGACATGATTTT +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMAPVTA*VLRHDF
Trigger: AAAATCATGTCTCAAGACCCAGGCTGTGACAGGAGC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCATGTCACAACCAAATaGGGTTCATCCCAGGAATGC +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMHVTTK*GSSQEC
Trigger: GCATTCCTGGGATGAACCCCATTTGGTTGTGACATG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCCATCAGCGGTGGGCTaGGTAAAGAAAATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQPSAVG*VKKIGP
Trigger: TGGACCAATTTTCTTTACCCAGCCCACCGCTGATGG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACTCGGGAGGCTGGGGTaGGAAGATTGCTTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVLGRLG*EDCLGP
Trigger: TGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCTGGCAGAGAGGGGATaGCCAATAGATAGAAGACGG +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLLAERG*PIDRRR
Trigger: CCGTCTTCTATCTATTGGGCATCCCCTCTCTGCCAG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGAGGTGTCTGGACTTCTaGTCCTTGAGCTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYERCLDF*SLSSPG
Trigger: TCCAGGAGAGCTCAAGGAGCAGAAGTCCAGACACCT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCCAGGAGGTCAAGGTTaGAGTGAACTGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLPGGQG*SELRSR
Trigger: GCGTGATCTCAGTTCACTGCAACCTTGACCTCCTGG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCTGTTATATGCCATCTaGGAGGTCCTTACTACTGCT +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMLLYAI*EVLTTA
Trigger: AGCAGTAGTAAGGACCTCCCAGATGGCATATAACAG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACTCCTTGAGCTCTCCTaGACCAGCTCTGCCACTCTC +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKELLELS*TSSATL
Trigger: GAGAGTGGCAGAGCTGGTCCAGGAGAGCTCAAGGAG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACTCAGGGAGCTGAGGTaGGAGGATCACTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKELRELR*EDHLSP
Trigger: AGGGCTCAAGTGATCCTCCCACCTCAGCTCCCTGAG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCATGTCACAACCAAATaGGGTTCATCCCAGGAATGC +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQHVTTK*GSSQEC
Trigger: GCATTCCTGGGATGAACCCCATTTGGTTGTGACATG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCTGGGTAAAGAAAATTaGTCCAAATATGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMLGKEN*SKYGQA
Trigger: CGCCTGGCCATATTTGGACCAATTTTCTTTACCCAG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGGTAATCCCAGAACTTTaGGAGGCGGAGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLVIPEL*EAEVEG
Trigger: TCCTTCCACCTCCGCCTCCCAAAGTTCTGGGATTAC...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGGTAATCCCAGAACTTTaGGAGGCGGAGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEVIPEL*EAEVEG
Trigger: TCCTTCCACCTCCGCCTCCCAAAGTTCTGGGATTAC...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCTGTGGCATCCATTGTaGGACACAGCTGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLLWHPL*DTAGFL
Trigger: GAGAAATCCAGCTGTGTCTCACAATGGATGCCACAG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGACATACCTGTTAGAATaGCATCCCCCACCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLTYLLE*HPPPEW
Trigger: CCACTCTGGTGGGGGATGTCATTCTAACAGGTATGT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCAAACCTCAGCATCATaGAATGTACCCATGTCACAA +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMQTSAS*NVPMSQ
Trigger: TTGTGACATGGGTACATTTCATGATGCTGAGGTTTG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGAGCAGCCAACAGACATaGAAAAATGCTCAACATCAC +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMSSQQT*KNAQHH
Trigger: GTGATGTTGAGCATTTTTTCATGTCTGTTGGCTGCT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGTCAACAACACTAAAATaGCCATACTGCCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMSTTLK*PYCPQQ
Trigger: TTGCTGTGGGCAGTATGGTCATTTTAGTGTTGTTGA...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACTCCTGGACCAGCTCTaGCACTCTCTTGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVLLDQL*HSLAVM
Trigger: CATCACAGCAAGAGAGTGGCAGAGCTGGTCCAGGAG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGAGCTGGCTAGCCATATaGAGAAGAATGAAACTGCAC +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQSWLAI*RRMKLH
Trigger: GTGCAGTTTCATTCTTCTGCATATGGCTAGCCAGCT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGATTGTGAGACACAGCTaGATTTCTCAGAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQIVRHS*ISQRWA
Trigger: TGCCCATCTCTGAGAAATCCAGCTGTGTCTCACAAT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCTGGGTAAAGAAAATTaGTCCAAATATGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQLGKEN*SKYGQA
Trigger: CGCCTGGCCATATTTGGACCAATTTTCTTTACCCAG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCCATCAGCGGTGGGCTaGGTAAAGAAAATTGGTCCA +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLPSAVG*VKKIGP
Trigger: TGGACCAATTTTCTTTACCCAGCCCACCGCTGATGG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGTCACAGCCTGGGTCTTaGGACATGATTTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYESQPGS*DMILVM
Trigger: CATCACCAAAATCATGTCTCAAGACCCAGGCTGTGA...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCTTTCTTGTATGCCTTaGCTAGTGGTTCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQLSCMP*LVVLSD
Trigger: GTCAGAAAGAACCACTAGTCAAGGCATACAAGAAAG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAGTCATGCCACTAACTTaGGAGACAGCCAGGGTCAAG +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKEVMPLT*ETARVK
Trigger: CTTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGAC...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCAAACCTCAGCATCATaGAATGTACCCATGTCACAA +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQQTSAS*NVPMSQ
Trigger: TTGTGACATGGGTACATTTCATGATGCTGAGGTTTG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAAAGGTTGCAGTGAACTaGGATCACGCCACTGCCTTC +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVKVAVN*DHATAF
Trigger: GAAGGCAGTGGCGTGATCTCAGTTCACTGCAACCTT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAGGTGGAAGGATCCCTTaGGCTCAGGAGTTTGAGACA +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVGGRIP*AQEFET
Trigger: TGTCTCAAACTCCTGAGCTCAAGGGATCCTTCCACC...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGTCAACAACACTAAAATaGCCATACTGCCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQSTTLK*PYCPQQ
Trigger: TTGCTGTGGGCAGTATGGTCATTTTAGTGTTGTTGA...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACCAGGAGGTCAAGGTTaGAGTGAACTGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKEPGGQG*SELRSR
Trigger: GCGTGATCTCAGTTCACTGCAACCTTGACCTCCTGG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGGCTCCTGTCACAGCCTaGGTCTTGAGACATGATTTT +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEAPVTA*VLRHDF
Trigger: AAAATCATGTCTCAAGACCCAGGCTGTGACAGGAGC...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGGCTCCTGTCACAGCCTaGGTCTTGAGACATGATTTT +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLAPVTA*VLRHDF
Trigger: AAAATCATGTCTCAAGACCCAGGCTGTGACAGGAGC...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGAAATTGGTCCAAATATaGCCAGGCGCAGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLKLVQI*PGAVSH
Trigger: GTGAGACACTGCGCCTGGCCATATTTGGACCAATTT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGAAATTGGTCCAAATATaGCCAGGCGCAGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEKLVQI*PGAVSH
Trigger: GTGAGACACTGCGCCTGGCCATATTTGGACCAATTT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGAGCCACTGTGGAAAGTaGTTTGGCAATTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQSHCGK*FGNFSK
Trigger: CTTTGAGAAATTGCCAAACCACTTTCCACAGTGGCT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAGTAATCCCAGAACTTTaGGAGGCGGAGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKEVIPEL*EAEVEG
Trigger: TCCTTCCACCTCCGCCTCCCAAAGTTCTGGGATTAC...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCAGGATGAAGGCTTCTaGACATGTAAAACTTTGGAA +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQQDEGF*TCKTLE
Trigger: TTCCAAAGTTTTACATGTTCAGAAGCCTTCATCCTG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGTGCAATGTGGCATTCTaGTTGGATCCTGGAATGGAA +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYECNVAF*LDPGME
Trigger: TTCCATTCCAGGATCCAATCAGAATGCCACATTGCA...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAACATACCTGTTAGAATaGCATCCCCCACCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKETYLLE*HPPPEW
Trigger: CCACTCTGGTGGGGGATGTCATTCTAACAGGTATGT...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGTCTATACAATGTTTTTaGGAATGTAGAAGAGACGGG +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMSIQCF*ECRRDG
Trigger: CCCGTCTCTTCTACATTCTCAAAAACATTGTATAGA...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGAATAGAGCTATCATTTaGCCCAGCAATCTCATTACT +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMNRAII*PSNLIT
Trigger: AGTAATGAGATTGCTGGGTCAAATGATAGCTCTATT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCAGCAATATACAGATTaGATGCTATTCCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMQQYTD*MLFLSN
Trigger: GTTTGAGAGGAATAGCATTCAATCTGTATATTGCTG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGCATTTAAAGGTCAAATaGTCCTGTCACAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEHLKVK*SCHSLG
Trigger: ACCCAGGCTGTGACAGGAGCATTTGACCTTTAAATG...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGAGGCTGTGTGTACTATaGAGCTGCTCACACTCTTAT +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLRLCVL*SCSHSY
Trigger: ATAAGAGTGTGAGCAGCTGCATAGTACACACAGCCT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGAGGCTGTGTGTACTATaGAGCTGCTCACACTCTTAT +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYERLCVL*SCSHSY
Trigger: ATAAGAGTGTGAGCAGCTGCATAGTACACACAGCCT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGATACACTTCCAAGGGTaGACAGAACATTCACCAAGG +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLIHFQG*TEHSPR
Trigger: CCTTGGTGAATGTTCTGTGCACCCTTGGAAGTGTAT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGAGCTGGCTAGCCATATaGAGAAGAATGAAACTGCAC +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYESWLAI*RRMKLH
Trigger: GTGCAGTTTCATTCTTCTGCATATGGCTAGCCAGCT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGATTGTGAGACACAGCTaGATTTCTCAGAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLIVRHS*ISQRWA
Trigger: TGCCCATCTCTGAGAAATCCAGCTGTGTCTCACAAT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCTGTTATATGCCATCTaGGAGGTCCTTACTACTGCT +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLLLYAI*EVLTTA
Trigger: AGCAGTAGTAAGGACCTCCCAGATGGCATATAACAG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGATGTGGCATTCTGATTaGATCCTGGAATGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQMWHSD*ILEWKE
Trigger: TTCTTTCCATTCCAGGATCCAATCAGAATGCCACAT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGAAAAGAATGAAATCATaGATGCAGCTGGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQKRMKS*MQLEPI
Trigger: AATGGGCTCCAGCTGCATCCATGATTTCATTCTTTT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGTTAGTTCAGCCACTGTaGAAAGTGGTTTGGCAATTT +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQLVQPL*KVVWQF
Trigger: AAATTGCCAAACCACTTTCCACAGTGGCTGAACTAA...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGAGACACATAGACCAATaGAACAGAATACAGAACCCA +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQRHIDQ*NRIQNP
Trigger: TGGGTTCTGTATTCTGTTCCATTGGTCTATGTGTCT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACTTCTGCTCCAATCCTaGTCCGCCTTGATGTCTTGT +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKELLLQS*SALMSC
Trigger: ACAAGACATCAAGGCGGACCAGGATTGGAGCAGAAG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641504.1
CDS-3UTR TCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAATCACAGCCTGGGTCTTaGGACATGATTTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKESQPGS*DMILVM
Trigger: CATCACCAAAATCATGTCTCAAGACCCAGGCTGTGA...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGACAGAGGAAGTTAGGTaGAGGATATATGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYETEEVR*RIYGNS
Trigger: AGAGTTCCCATATATCCTTCACCTAACTTCCTCTGT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGATTGACACATCATTATaGCCCAAAGCCCATAGTATA +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQIDTSL*PKAHSI
Trigger: TATACTATGGGCTTTGGGTCATAATGATGTGTCAAT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGAGGCTTTATCAAAATTaGAAACCTCTGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQRLYQN*KPLLCK
Trigger: TTTGCAGAGCAGAGGTTTTCAATTTTGATAAAGCCT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGAATAGAGCTATCATTTaGCCCAGCAATCTCATTACT +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQNRAII*PSNLIT
Trigger: AGTAATGAGATTGCTGGGTCAAATGATAGCTCTATT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGAGCAGCCAACAGACATaGAAAAATGCTCAACATCAC +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLSSQQT*KNAQHH
Trigger: GTGATGTTGAGCATTTTTTCATGTCTGTTGGCTGCT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGAGGCATCACATTACCTaGCTTGAAACTCTAAGGCTA +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLRHHIT*LETLRL
Trigger: TAGCCTTAGAGTTTCAAGTCAGGTAATGTGATGCCT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCAGCAATATACAGATTaGATGCTATTCCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQQQYTD*MLFLSN
Trigger: GTTTGAGAGGAATAGCATTCAATCTGTATATTGCTG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGTGGAAGAGGTACATCTaGAGTAAGCAGGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEWKRYI*SKQEEK
Trigger: CTTTTCTTCCTGCTTACTGCAGATGTACCTCTTCCA...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGAATTTTGGTAGGTATTaGGGTAGTGTTATACCAGTT +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMNFGRY*GSVIPV
Trigger: AACTGGTATAACACTACCGCAATACCTACCAAAATT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGAGTCAAAGGGTAAATaGATATGTAATTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMESKGK*ICNFGR
Trigger: CCTACCAAAATTACATATGCATTTACCCTTTGACTC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCTATCAAAAGACACATaGACTCATATGTTCATTGCA +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMLSKDT*THMFIA
Trigger: TGCAATGAACATATGAGTGCATGTGTCTTTTGATAG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGTAACCTTTTTAGATTaGCTTCTTTCACTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMVTFLD*LLSLSH
Trigger: ATGGCTAAGTGAAAGAAGCCAATCTAAAAAGGTTAC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGCATCCCCCACCAGAGTaGTTACATTTGTTACATTCA +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEHPPPE*LHLLHS
Trigger: TGAATGTAACAAATGTAACCACTCTGGTGGGGGATG...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAAAATTGGTCCAAATATaGCCAGGCGCAGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVKLVQI*PGAVSH
Trigger: GTGAGACACTGCGCCTGGCCATATTTGGACCAATTT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGAGCCACTGTGGAAAGTaGTTTGGCAATTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLSHCGK*FGNFSK
Trigger: CTTTGAGAAATTGCCAAACCACTTTCCACAGTGGCT...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR CAA 72 bp ACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTaGAGAGACAGCCAGGGTCAAGTGCTTCTGTTTATT +
Preference number: 4 (lower is better)
Translates to: TYSNFLCGHATN*RDSQGQVLLFI
Trigger: AATAAACAGAAGCACTTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAAGGCTGTGTGTACTATaGAGCTGCTCACACTCTTAT +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKERLCVL*SCSHSY
Trigger: ATAAGAGTGTGAGCAGCTGCATAGTACACACAGCCT...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGGAGTCAAAGGGTAAATaGATATGTAATTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQESKGK*ICNFGR
Trigger: CCTACCAAAATTACATATGCATTTACCCTTTGACTC...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGGATTGGATCCTGGAATaGAAAGAAGACATTACTGGA +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEDWILE*KEDITG
Trigger: TCCAGTAATGTCTTCTTTCCATTCCAGGATCCAATC...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGATTCTGATTGGATCCTaGAATGGAAAGAAGACATTA +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQILIGS*NGKKTL
Trigger: TAATGTCTTCTTTCCATTCCAGGATCCAATCAGAAT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGGTTCTCACTTATAAGTaGGAGCTAAACATTGGGTAC +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEVLTYK*ELNIGY
Trigger: GTACCCAATGTTTAGCTCCCACTTATAAGTGAGAAC...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACTGGGTAAAGAAAATTaGTCCAAATATGGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVLGKEN*SKYGQA
Trigger: CGCCTGGCCATATTTGGACCAATTTTCTTTACCCAG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGTCATACCAGTCAGAATaGCTATCATTAAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQSYQSE*LSLKSK
Trigger: CTTTGACTTTAATGATAGCCATTCTGACTGGTATGA...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACTTTCTTGTATGCCTTaGCTAGTGGTTCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVLSCMP*LVVLSD
Trigger: GTCAGAAAGAACCACTAGTCAAGGCATACAAGAAAG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACTTTCTTGTATGCCTTaGCTAGTGGTTCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKELSCMP*LVVLSD
Trigger: GTCAGAAAGAACCACTAGTCAAGGCATACAAGAAAG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAACAGAGGAAGTTAGGTaGAGGATATATGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKETEEVR*RIYGNS
Trigger: AGAGTTCCCATATATCCTTCACCTAACTTCCTCTGT...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGATTGACACATCATTATaGCCCAAAGCCCATAGTATA +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEIDTSL*PKAHSI
Trigger: TATACTATGGGCTTTGGGTCATAATGATGTGTCAAT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGTCTATACAATGTTTTTaGGAATGTAGAAGAGACGGG +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYESIQCF*ECRRDG
Trigger: CCCGTCTCTTCTACATTCTCAAAAACATTGTATAGA...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGAGGAGTAACAGAAAGTaGTTGGGAAAATCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYERSNRK*LGKSSK
Trigger: TTTGGAAGATTTTCCCAATCACTTTCTGTTACTCCT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAAGCAGCCAACAGACATaGAAAAATGCTCAACATCAC +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVSSQQT*KNAQHH
Trigger: GTGATGTTGAGCATTTTTTCATGTCTGTTGGCTGCT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAAGGCATCACATTACCTaGCTTGAAACTCTAAGGCTA +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVRHHIT*LETLRL
Trigger: TAGCCTTAGAGTTTCAAGTCAGGTAATGTGATGCCT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCAGCAATATACAGATTaGATGCTATTCCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLQQYTD*MLFLSN
Trigger: GTTTGAGAGGAATAGCATTCAATCTGTATATTGCTG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGCAGCAATATACAGATTaGATGCTATTCCTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEQQYTD*MLFLSN
Trigger: GTTTGAGAGGAATAGCATTCAATCTGTATATTGCTG...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAATCAACAACACTAAAATaGCCATACTGCCCACAGCAA +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKESTTLK*PYCPQQ
Trigger: TTGCTGTGGGCAGTATGGTCATTTTAGTGTTGTTGA...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGAGTGTTATACCAGTTTaGATCCTCACAAGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYESVIPV*ILTSKL
Trigger: TAACTTGCTTGTGAGGATGCAAACTGGTATAACACT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACTAAGCACTGTTATTTaGTGTCCTGGAAGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVLSTVI*CPGSRV
Trigger: AACTCTGCTTCCAGGACACCAAATAACAGTGCTTAG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCCCATAGTATACACTTaGTGTAGTACATTCTATGAG +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLPIVYT*CSTFYE
Trigger: CTCATAGAATGTACTACACCAAGTGTATACTATGGG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGCCCATAGTATACACTTaGTGTAGTACATTCTATGAG +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEPIVYT*CSTFYE
Trigger: CTCATAGAATGTACTACACCAAGTGTATACTATGGG...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR CAA 72 bp ATACTGCTGAGTCAAAGGGTAAATGCATATGTAATTTaGGTAGGTATTGCGGTAGTGTTATACCAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: ILLSQRVNAYVI*VGIAVVLYQFA
Trigger: TGCAAACTGGTATAACACTACCGCAATACCTACCAAAATTACATATGCATTTACCCTTTGACTCAGCAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACAAATGGTGCTGGAATaGTTGTATGTTCATATGCAC +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVQMVLE*LYVHMH
Trigger: GTGCATATGAACATACAATCATTCCAGCACCATTTG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGGAGTCAAAGGGTAAATaGATATGTAATTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEESKGK*ICNFGR
Trigger: CCTACCAAAATTACATATGCATTTACCCTTTGACTC...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAGATTGGATCCTGGAATaGAAAGAAGACATTACTGGA +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKEDWILE*KEDITG
Trigger: TCCAGTAATGTCTTCTTTCCATTCCAGGATCCAATC...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAATGTGGCATTCTGATTaGATCCTGGAATGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKEMWHSD*ILEWKE
Trigger: TTCTTTCCATTCCAGGATCCAATCAGAATGCCACAT...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAAAAAGAATGAAATCATaGATGCAGCTGGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVKRMKS*MQLEPI
Trigger: AATGGGCTCCAGCTGCATCCATGATTTCATTCTTTT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAATTAGTTCAGCCACTGTaGAAAGTGGTTTGGCAATTT +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKELVQPL*KVVWQF
Trigger: AAATTGCCAAACCACTTTCCACAGTGGCTGAACTAA...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGTCATACCAGTCAGAATaGCTATCATTAAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYESYQSE*LSLKSK
Trigger: CTTTGACTTTAATGATAGCCATTCTGACTGGTATGA...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAAGACACATAGACCAATaGAACAGAATACAGAACCCA +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVRHIDQ*NRIQNP
Trigger: TGGGTTCTGTATTCTGTTCCATTGGTCTATGTGTCT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGGATGAAACAAAGAAATaGACAAACATTCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEDETKK*TNIPCS
Trigger: TGAGCATGGAATGTTTGTCCATTTCTTTGTTTCATC...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGGGAACATCTAGACATTaGAAACATTCAAAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLGTSRH*KHSKFH
Trigger: ATGGAACTTTGAATGTTTCCAATGTCTAGATGTTCC...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641931.1
CDS-3UTR TCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAAATAGAGCTATCATTTaGCCCAGCAATCTCATTACT +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVNRAII*PSNLIT
Trigger: AGTAATGAGATTGCTGGGTCAAATGATAGCTCTATT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR TCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAAATAGAGCTATCATTTaGCCCAGCAATCTCATTACT +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKENRAII*PSNLIT
Trigger: AGTAATGAGATTGCTGGGTCAAATGATAGCTCTATT...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAAGTGTTATACCAGTTTaGATCCTCACAAGCAAGTTA +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKESVIPV*ILTSKL
Trigger: TAACTTGCTTGTGAGGATGCAAACTGGTATAACACT...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAGAACATGTAAAACTTTaGAAGAGGTACATCTGCAGT +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVEHVKL*KRYICS
Trigger: ACTGCAGATGTACCTCTTCCAAAGTTTTACATGTTC...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACCCATAGTATACACTTaGTGTAGTACATTCTATGAG +
Preference number: 4 (lower is better)
Translates to: IELSFDPAISLLGIYPKEPIVYT*CSTFYE
Trigger: CTCATAGAATGTACTACACCAAGTGTATACTATGGG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR CAA 72 bp ATAAAGTCAGAGGAGTCACATTATGGAATTTCAACATaGACTATAAAGCTACAGTATTCAAGACCGTGTGGT +
Preference number: 4 (lower is better)
Translates to: IKSEESHYGIST*TIKLQYSRPCG
Trigger: ACCACACGGTCTTGAATACTGTAGCTTTATAGTCAATGTTGAAATTCCATAATGTGACTCCTCTGACTTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR CAA 72 bp ACTAAAATGACCATACTGCCCACAGCAATATACAGATaGAATGCTATTCCTCTCAAACTACCAACATCATTT +
Preference number: 4 (lower is better)
Translates to: TKMTILPTAIYR*NAIPLKLPTSF
Trigger: AAATGATGTTGGTAGTTTGAGAGGAATAGCATTCAATCTGTATATTGCTGTGGGCAGTATGGTCATTTTAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
3UTR CAA 72 bp ATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATaGGGAAATGTACAGACTTCAATGCTTACATTGAAA +
Preference number: 4 (lower is better)
Translates to: IKIRVKLLMQEL*GNVQTSMLTLK
Trigger: TTTCAATGTAAGCATTGAAGTCTGTACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAAATTTTGGTAGGTATTaGGGTAGTGTTATACCAGTT +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVNFGRY*GSVIPV
Trigger: AACTGGTATAACACTACCGCAATACCTACCAAAATT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAGAGTCAAAGGGTAAATaGATATGTAATTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVESKGK*ICNFGR
Trigger: CCTACCAAAATTACATATGCATTTACCCTTTGACTC...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR GCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACTATCAAAAGACACATaGACTCATATGTTCATTGCA +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVLSKDT*THMFIA
Trigger: TGCAATGAACATATGAGTGCATGTGTCTTTTGATAG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAATTCTGATTGGATCCTaGAATGGAAAGAAGACATTA +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVILIGS*NGKKTL
Trigger: TAATGTCTTCTTTCCATTCCAGGATCCAATCAGAAT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAGTAACCTTTTTAGATTaGCTTCTTTCACTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVVTFLD*LLSLSH
Trigger: ATGGCTAAGTGAAAGAAGCCAATCTAAAAAGGTTAC...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTATCATACCAGTCAGAATaGCTATCATTAAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVSYQSE*LSLKSK
Trigger: CTTTGACTTTAATGATAGCCATTCTGACTGGTATGA...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CCA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAGATGAAACAAAGAAATaGACAAACATTCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVDETKK*TNIPCS
Trigger: TGAGCATGGAATGTTTGTCCATTTCTTTGTTTCATC...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTGCTAAGCACTGTTATTaGGTGTCCTGGAAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGAKHCY*VSWKQS
Trigger: ACTCTGCTTCCAGGACACCAAATAACAGTGCTTAGC...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTTTCCATCATGTTCCATaGAGGGGCTTCTTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGFHHVP*RGFFLQ
Trigger: TTGGAGAAAGAAGCCCCTCAATGGAACATGATGGAA...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCGGTCATGCCACTAACTaGAGAGACAGCCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRGHATN*RDSQGQ
Trigger: TTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGACC...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTCTCATGTCTCTACTTTaGTACTCACTCAAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGLMSLL*YSLKVP
Trigger: TGGAACTTTGAGTGAGTACAAAAGTAGAGACATGAG...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
CDS-3UTR CAA 90 bp CAGCTACTCGGGAGGCTGGGGTGGGAAGATTGCTTAGGCCCAGGAGGTCAAGGTACATTCAAGCCTACATaGACACATCATTATGACCCA +
Preference number: 5 (lower is better)
Translates to: QLLGRLGWEDCLGPGGQGTFKPT*THHYDP
Trigger: TGGGTCATAATGATGTGTCAATGTAGGCTTGAATGT...ACCTTGACCTCCTGGGCCTAAGCAATCTTCCCACCCCAGCCTCCCGAGTAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCTCTCCTTCCTGTTCCTaGCCTCTCCTTATAGATAAC +
Preference number: 5 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRSPSCS*PLLIDN
Trigger: GTTATCTATAAGGAGAGGCAAGGAACAGGAAGGAGA...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCAATTGTGAAAGTGCTTaGGAAAGGCTTCTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRNCESA*ERLLLV
Trigger: GACCAGAAGAAGCCTTTCCAAAGCACTTTCACAATT...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
CDS-3UTR CAA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCTATAAAATGAGGACTTaGGAAGCAATGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRYKMRT*EAMISS
Trigger: GCTGGAGATCATTGCTTCCAAAGTCCTCATTTTATA...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641541.1
ENST00000641931.1
CDS-3UTR CAA 90 bp TGCCCATCAGCGGTGGGCTGGGTAAAGAAAATTGGTCCAAATATGGCCAGGCGCCCAGAGTGGTTACATTaGTTACATTCAAGCCTACAT +
Preference number: 5 (lower is better)
Translates to: CPSAVGWVKKIGPNMARRPEWLH*LHSSLH
Trigger: ATGTAGGCTTGAATGTAACAAATGTAACCACTCTGG...GCGCCTGGCCATATTTGGACCAATTTTCTTTACCCAGCCCACCGCTGATGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGCAATCCTGGTCCGCCTaGATGTCTTGTGTAGAGTCG +
Preference number: 5 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMQSWSA*MSCVES
Trigger: CGACTCTACACAAGACATCAAGGCGGACCAGGATTG...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCAATCCTGGTCCGCCTaGATGTCTTGTGTAGAGTCG +
Preference number: 5 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQQSWSA*MSCVES
Trigger: CGACTCTACACAAGACATCAAGGCGGACCAGGATTG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGGTCCGCCTTGATGTCTaGTGTAGAGTCGTCACAGTT +
Preference number: 5 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQVRLDV*CRVVTV
Trigger: AACTGTGACGACTCTACACAAGACATCAAGGCGGAC...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGAGGAGTTTGAGACACTaGGGCAACATAGAGAGAACC +
Preference number: 5 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMRSLRH*GNIERT
Trigger: GGTTCTCTCTATGTTGCCCAAGTGTCTCAAACTCCT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACTGGACTTCTGCTCCTaGAGCTCTCCTGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVLDFCS*SSPGPA
Trigger: AGCTGGTCCAGGAGAGCTCAAGGAGCAGAAGTCCAG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACTGGACTTCTGCTCCTaGAGCTCTCCTGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: IELSFDPAISLLGIYPKELDFCS*SSPGPA
Trigger: AGCTGGTCCAGGAGAGCTCAAGGAGCAGAAGTCCAG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGAGGAGTTTGAGACACTaGGGCAACATAGAGAGAACC +
Preference number: 5 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQRSLRH*GNIERT
Trigger: GGTTCTCTCTATGTTGCCCAAGTGTCTCAAACTCCT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGGTCCGCCTTGATGTCTaGTGTAGAGTCGTCACAGTT +
Preference number: 5 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEVRLDV*CRVVTV
Trigger: AACTGTGACGACTCTACACAAGACATCAAGGCGGAC...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGTTCCATCATGTTCCATaGAGGGGCTTCTTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQFHHVP*RGFFLQ
Trigger: TTGGAGAAAGAAGCCCCTCAATGGAACATGATGGAA...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGAATTGTGAAAGTGCTTaGGAAAGGCTTCTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMNCESA*ERLLLV
Trigger: GACCAGAAGAAGCCTTTCCAAAGCACTTTCACAATT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
CDS-3UTR CAA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGGATGAAGTGATCAAATaGAAGAAGGCAGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMDEVIK*KKAGKV
Trigger: AACTTTGCCTGCCTTCTTCAATTTGATCACTTCATC...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
CDS-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAGGTCATGCCACTAACTaGAGAGACAGCCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVGHATN*RDSQGQ
Trigger: TTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGACC...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAGGTCATGCCACTAACTaGAGAGACAGCCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: IELSFDPAISLLGIYPKEGHATN*RDSQGQ
Trigger: TTGACCCTGGCTGTCTCTCAAGTTAGTGGCATGACC...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGAGGAGTTTGAGACACTaGGGCAACATAGAGAGAACC +
Preference number: 5 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYERSLRH*GNIERT
Trigger: GGTTCTCTCTATGTTGCCCAAGTGTCTCAAACTCCT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAGTCCGCCTTGATGTCTaGTGTAGAGTCGTCACAGTT +
Preference number: 5 (lower is better)
Translates to: IELSFDPAISLLGIYPKEVRLDV*CRVVTV
Trigger: AACTGTGACGACTCTACACAAGACATCAAGGCGGAC...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGTTCCATCATGTTCCATaGAGGGGCTTCTTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLFHHVP*RGFFLQ
Trigger: TTGGAGAAAGAAGCCCCTCAATGGAACATGATGGAA...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp GTAAATGATGAGTTAGTGGGTGCAGCACACCAACATGGCACACGTATACATATGACTGTCTTCATAGTTTaGCCTTTTCCAGAATGTCAT +
Preference number: 5 (lower is better)
Translates to: VNDELVGAAHQHGTRIHMTVFIV*PFPECH
Trigger: ATGACATTCTGGAAAAGGCAAAACTATGAAGACAGT...CATATGTATACGTGTGCCATGTTGGTGTGCTGCACCCACTAACTCATCATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGACATTCAAGCCTACATaGACACATCATTATGACCCA +
Preference number: 5 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQTFKPT*THHYDP
Trigger: TGGGTCATAATGATGTGTCAATGTAGGCTTGAATGT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGCCAGAGTGGTTACATTaGTTACATTCAAGCCTACAT +
Preference number: 5 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQPEWLH*LHSSLH
Trigger: ATGTAGGCTTGAATGTAACAAATGTAACCACTCTGG...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGAATTGTGAAAGTGCTTaGGAAAGGCTTCTTCTGGTC +
Preference number: 5 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYENCESA*ERLLLV
Trigger: GACCAGAAGAAGCCTTTCCAAAGCACTTTCACAATT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
CDS-3UTR CAA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAGCTAAGCACTGTTATTaGGTGTCCTGGAAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: IELSFDPAISLLGIYPKEAKHCY*VSWKQS
Trigger: ACTCTGCTTCCAGGACACCAAATAACAGTGCTTAGC...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAGCTAAGCACTGTTATTaGGTGTCCTGGAAGCAGAGT +
Preference number: 5 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVAKHCY*VSWKQS
Trigger: ACTCTGCTTCCAGGACACCAAATAACAGTGCTTAGC...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGAATGCATATGTAATTTaGGTAGGTATTGCGGTAGTG +
Preference number: 5 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQNAYVI*VGIAVV
Trigger: CACTACCGCAATACCTACCAAAATTACATATGCATT...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGTACATATGTCTAGACTaGCTTCCATTCTGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEYICLD*LPFWSS
Trigger: AGAGGACCAGAATGGAAGCAAGTCTAGACATATGTA...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACTTGAGCTCAGGAGTTaGAGACACTTGGGCAACATA +
Preference number: 5 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVLELRS*RHLGNI
Trigger: TATGTTGCCCAAGTGTCTCAAACTCCTGAGCTCAAG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp GTCACTTACAGTAATTTTCTTTGTGGTCATGCCACTAACTTGAGAGACAGCCAGTTCCATGCTCATGAATaGGAAGAATCAACAACACTA +
Preference number: 5 (lower is better)
Translates to: VTYSNFLCGHATNLRDSQFHAHE*EESTTL
Trigger: TAGTGTTGTTGATTCTTCCAATTCATGAGCATGGAA...CTGGCTGTCTCTCAAGTTAGTGGCATGACCACAAAGAAAATTACTGTAAGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGTATAAAATGAGGACTTaGGAAGCAATGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLYKMRT*EAMISS
Trigger: GCTGGAGATCATTGCTTCCAAAGTCCTCATTTTATA...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641541.1
ENST00000641931.1
CDS-3UTR CAA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAATTCCATCATGTTCCATaGAGGGGCTTCTTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: IELSFDPAISLLGIYPKEFHHVP*RGFFLQ
Trigger: TTGGAGAAAGAAGCCCCTCAATGGAACATGATGGAA...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGGATGAAGTGATCAAATaGAAGAAGGCAGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEDEVIK*KKAGKV
Trigger: AACTTTGCCTGCCTTCTTCAATTTGATCACTTCATC...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
CDS-3UTR CAA 90 bp CATTATAGTATCATACAGAATAGTTTCACTGTCCTAAAAGCCCTCCGTGTTCTGCCAGAGTGGTTACATTaGTTACATTCAAGCCTACAT +
Preference number: 5 (lower is better)
Translates to: HYSIIQNSFTVLKALRVLPEWLH*LHSSLH
Trigger: ATGTAGGCTTGAATGTAACAAATGTAACCACTCTGG...CAGAACACGGAGGGCTTTTAGGACAGTGAAACTATTCTGTATGATACTATAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTATACATATGTCTAGACTaGCTTCCATTCTGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVYICLD*LPFWSS
Trigger: AGAGGACCAGAATGGAAGCAAGTCTAGACATATGTA...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGACTGTCTTCATAGTTTaGCCTTTTCCAGAATGTCAT +
Preference number: 5 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYETVFIV*PFPECH
Trigger: ATGACATTCTGGAAAAGGCAAAACTATGAAGACAGT...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CATCATTATGACCCAAAGCCCATAGTATACACTTGGTGTAGTACATTCTATGAGTTCCATGCTCATGAATaGGAAGAATCAACAACACTA +
Preference number: 5 (lower is better)
Translates to: HHYDPKPIVYTWCSTFYEFHAHE*EESTTL
Trigger: TAGTGTTGTTGATTCTTCCAATTCATGAGCATGGAA...CTCATAGAATGTACTACACCAAGTGTATACTATGGGCTTTGGGTCATAATGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAACTCATGTCTCTACTTTaGTACTCACTCAAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: IELSFDPAISLLGIYPKELMSLL*YSLKVP
Trigger: TGGAACTTTGAGTGAGTACAAAAGTAGAGACATGAG...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
CDS-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAGATGAAGTGATCAAATaGAAGAAGGCAGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVDEVIK*KKAGKV
Trigger: AACTTTGCCTGCCTTCTTCAATTTGATCACTTCATC...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
CDS-3UTR CAA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAATGGTTATGTAAGATGTaGACACAGAGGAAGTTAGGT +
Preference number: 5 (lower is better)
Translates to: IELSFDPAISLLGIYPKEWLCKM*TQRKLG
Trigger: ACCTAACTTCCTCTGTGTCAACATCTTACATAACCA...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAACATTCAAGCCTACATaGACACATCATTATGACCCA +
Preference number: 5 (lower is better)
Translates to: IELSFDPAISLLGIYPKETFKPT*THHYDP
Trigger: TGGGTCATAATGATGTGTCAATGTAGGCTTGAATGT...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTACCAGAGTGGTTACATTaGTTACATTCAAGCCTACAT +
Preference number: 5 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVPEWLH*LHSSLH
Trigger: ATGTAGGCTTGAATGTAACAAATGTAACCACTCTGG...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAAAAATTCGTGTGAAGTaGCTAATGCAGGAGCTATTG +
Preference number: 5 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVKIRVK*LMQELL
Trigger: CAATAGCTCCTGCATTAGCAACTTCACACGAATTTT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTAAATGCATATGTAATTTaGGTAGGTATTGCGGTAGTG +
Preference number: 5 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVNAYVI*VGIAVV
Trigger: CACTACCGCAATACCTACCAAAATTACATATGCATT...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp ATAGAGCTATCATTTGACCCAGCAATCTCATTACTGGGTATATATCCAAAAGAAAATGCATATGTAATTTaGGTAGGTATTGCGGTAGTG +
Preference number: 5 (lower is better)
Translates to: IELSFDPAISLLGIYPKENAYVI*VGIAVV
Trigger: CACTACCGCAATACCTACCAAAATTACATATGCATT...TTCTTTTGGATATATACCCAGTAATGAGATTGCTGGGTCAAATGATAGCTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS-3UTR CAA 90 bp CAACATATTAAAATTCGTGTGAAGTTGCTAATGCAGGAGCTATTGGGAAATGTATTCCATGCTCATGAATaGGAAGAATCAACAACACTA +
Preference number: 5 (lower is better)
Translates to: QHIKIRVKLLMQELLGNVFHAHE*EESTTL
Trigger: TAGTGTTGTTGATTCTTCCAATTCATGAGCATGGAA...TACATTTCCCAATAGCTCCTGCATTAGCAACTTCACACGAATTTTAATATGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS TCA 72 bp ACTCCATTTAAGCTAGGTGTCTGGACTTCTGCTCCTTaGGCTCTCCTGGACCAGCTCTGCCACTCTCTTGCT +
Preference number: 6 (lower is better)
Translates to: TPFKLGVWTSAP*ALLDQLCHSLA
Trigger: AGCAAGAGAGTGGCAGAGCTGGTCCAGGAGAGCTCAAGGAGCAGAAGTCCAGACACCTAGCTTAAATGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641541.1
ENST00000641593.1
ENST00000641931.1
CDS CAA 90 bp TCATGTCTCTACTTTTGTACTCACTCAAAGTTCCATCATGTTCCATaGAGGGGCTTCTTTCTCCAAGGCTGTGTGTACTATGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SCLYFCTHSKFHHVP*RGFFLQGCVYYAAA
Trigger: AGCAGCTGCATAGTACACACAGCCTTGGAGAAAGAAGCCCCTCAATGGAACATGATGGAACTTTGAGTGAGTACAAAAGTAGAGACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
CDS CAA 72 bp TACTTTTGTACTCACTCAAAGTTCCATCATGTTCCATaGAGGGGCTTCTTTCTCCAAGGCTGTGTGTACTAT +
Preference number: 6 (lower is better)
Translates to: YFCTHSKFHHVP*RGFFLQGCVYY
Trigger: ATAGTACACACAGCCTTGGAGAAAGAAGCCCCTCAATGGAACATGATGGAACTTTGAGTGAGTACAAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
CDS CAA 72 bp ACTTTGGAAGCAATGATCTCCAGCTTGATAAATATTTaGAGTATCTACTCAATCCTGGTCCGCCTTGATGTC +
Preference number: 6 (lower is better)
Translates to: TLEAMISSLINI*SIYSILVRLDV
Trigger: GACATCAAGGCGGACCAGGATTGAGTAGATACTCAAAATATTTATCAAGCTGGAGATCATTGCTTCCAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641541.1
ENST00000641931.1
CDS CAA 90 bp AAAATGAGGACTTTGGAAGCAATGATCTCCAGCTTGATAAATATTTaGAGTATCTACTCAATCCTGGTCCGCCTTGATGTCTTGTGTAGA +
Preference number: 6 (lower is better)
Translates to: KMRTLEAMISSLINI*SIYSILVRLDVLCR
Trigger: TCTACACAAGACATCAAGGCGGACCAGGATTGAGTAGATACTCAAAATATTTATCAAGCTGGAGATCATTGCTTCCAAAGTCCTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641541.1
ENST00000641931.1
CDS CAA 90 bp ATGTCAGATCTCATAAATCAAGTCCTTAAGCTCATGTCTCTACTTTaGTACTCACTCAAAGTTCCATCATGTTCCATTGAGGGGCTTCTT +
Preference number: 6 (lower is better)
Translates to: MSDLINQVLKLMSLL*YSLKVPSCSIEGLL
Trigger: AAGAAGCCCCTCAATGGAACATGATGGAACTTTGAGTGAGTACAAAAGTAGAGACATGAGCTTAAGGACTTGATTTATGAGATCTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
CDS CAA 90 bp GCTTCTTCTGGTCTTCATCTTAGTTTCCATGCTGTGTGGTTTAAGTaGATGTCAGATCTCATAAATCAAGTCCTTAAGCTCATGTCTCTA +
Preference number: 6 (lower is better)
Translates to: ASSGLHLSFHAVWFK*MSDLINQVLKLMSL
Trigger: TAGAGACATGAGCTTAAGGACTTGATTTATGAGATCTGACATCAACTTAAACCACACAGCATGGAAACTAAGATGAAGACCAGAAGAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1
CDS CAA 90 bp TTTCCCATCTATAAAATGAGGACTTTGGAAGCAATGATCTCCAGCTaGATAAATATTTTGAGTATCTACTCAATCCTGGTCCGCCTTGAT +
Preference number: 6 (lower is better)
Translates to: FPIYKMRTLEAMISS*INILSIYSILVRLD
Trigger: ATCAAGGCGGACCAGGATTGAGTAGATACTCAAAATATTTATCAAGCTGGAGATCATTGCTTCCAAAGTCCTCATTTTATAGATGGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641541.1
ENST00000641931.1
CDS CAA 90 bp CAAATAGAAGTCTGTATGCTTTGTTTAGGTGATGAAGTGATCAAATaGAAGAAGGCAGGCAAAGTTCCTGTCTTCCCAGAGTTTATATTT +
Preference number: 6 (lower is better)
Translates to: QIEVCMLCLGDEVIK*KKAGKVPVFPEFIF
Trigger: AAATATAAACTCTGGGAAGACAGGAACTTTGCCTGCCTTCTTCAATTTGATCACTTCATCACCTAAACAAAGCATACAGACTTCTATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641504.1
ENST00000641541.1
ENST00000641593.1