Pregenerated sensors for OR2A4 (Homo sapiens)
Ensembl gene IDs: ENSG00000180658Ensembl transcript IDs: ENST00000315453.4
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | AAGTCCTCTGAAGGGACCAGTGTTTTGAGGAAAACATTATGGGAGGTATGGGACTGGCTGCAGCACAACTaGAAGAGATCAATTTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: KSSEGTSVLRKTLWEVWDWLQHN*KRSISR Trigger: TCTAGAAATTGATCTCTTCAAGTTGTGCTGCAGCCA...GTCCCATACCTCCCATAATGTTTTCCTCAAAACACTGGTCCCTTCAGAGGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315453.4 |
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| CDS-3UTR TCA 90 bp | TCCTCTGAAGGGACCAGTGTTTTGAGGAAAACATTATGGGAGGTATGGGACTGGGGCTGCAGCACAACTTaGAGAGATCAATTTCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSEGTSVLRKTLWEVWDWGCSTT*RDQFLE Trigger: TTCTAGAAATTGATCTCTTCAAGTTGTGCTGCAGCC...CCAGTCCCATACCTCCCATAATGTTTTCCTCAAAACACTGGTCCCTTCAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000315453.4 |
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| CDS-3UTR TCA 90 bp | TCTGAAGGGACCAGTGTTTTGAGGAAAACATTATGGGAGGTATGGGACTGGATCAAGGGACCAGTGTTTTaGGGAAAACATTATGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SEGTSVLRKTLWEVWDWIKGPVF*GKHYGR Trigger: CCTCCCATAATGTTTTCCTCAAAACACTGGTCCCTT...GATCCAGTCCCATACCTCCCATAATGTTTTCCTCAAAACACTGGTCCCTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000315453.4 |
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| CDS-3UTR CCA 90 bp | TCTGAAGGGACCAGTGTTTTGAGGAAAACATTATGGGAGGTATGGGACTGGATCTTGAGGAAAACATTATaGGAGGTATGGGACTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SEGTSVLRKTLWEVWDWILRKTL*EVWDWI Trigger: GATCCAGTCCCATACCTCCCATAATGTTTTCCTCAA...GATCCAGTCCCATACCTCCCATAATGTTTTCCTCAAAACACTGGTCCCTTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000315453.4 |
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| CDS-3UTR TCA 90 bp | TCTGAAGGGACCAGTGTTTTGAGGAAAACATTATGGGAGGTATGGGACTGGATCTCATCCCACATCTGCTaGAATCAGTCATTTAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SEGTSVLRKTLWEVWDWISSHIC*NQSFKG Trigger: ACCTTTAAATGACTGATTTCAGCAGATGTGGGATGA...GATCCAGTCCCATACCTCCCATAATGTTTTCCTCAAAACACTGGTCCCTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315453.4 |
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| CDS-3UTR TCA 90 bp | TCTGAAGGGACCAGTGTTTTGAGGAAAACATTATGGGAGGTATGGGACTGGATCTTCACTATGCTAATATaGATTGTGATCCCTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SEGTSVLRKTLWEVWDWIFTMLI*IVIPRQ Trigger: CTGTCTAGGGATCACAATTCATATTAGCATAGTGAA...GATCCAGTCCCATACCTCCCATAATGTTTTCCTCAAAACACTGGTCCCTTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315453.4 |
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