Pregenerated sensors for OR1M1 (Homo sapiens)
Ensembl gene IDs: ENSG00000170929Ensembl transcript IDs: ENST00000429566.3, ENST00000641627.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGGGCAACAGAGCCCCAGAATGATTATCTTTCCTAACGGAGTTTaGAGACAGAGTCGGTCCAGCCACAGAACCACATGGCGGCATTTC | + |
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Preference number: 1 (lower is better) Translates to: PGQQSPRMIIFPNGV*RQSRSSHRTTWRHF Trigger: GAAATGCCGCCATGTGGTTCTGTGGCTGGACCGACTCTGTCTCCAAACTCCGTTAGGAAAGATAATCATTCTGGGGCTCTGTTGCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| 3UTR CCA 90 bp | CCTAACGGAGTTTGGAGACAGAGTCGGTCCAGCCACAGAACCACATaGCGGCATTTCACTCCTTCACGTGTTGACATCTTCCTAAGACTC | + |
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Preference number: 1 (lower is better) Translates to: PNGVWRQSRSSHRTT*RHFTPSRVDIFLRL Trigger: GAGTCTTAGGAAGATGTCAACACGTGAAGGAGTGAAATGCCGCCATGTGGTTCTGTGGCTGGACCGACTCTGTCTCCAAACTCCGTTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| 3UTR-3UTR TCA 90 bp | CCAAGATCGACGTGCCGTTGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTGGCGGTGGGTGGATCATTTaGGGTCAGGAGGTCGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: PRSTCRWDWFLVKSFFRGGGWII*GQEVEN Trigger: GTTCTCGACCTCCTGACCTCAAATGATCCACCCACC...GCCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGGCACGTCGATCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| 3UTR-3UTR TCA 90 bp | AGCCACAGAACCACATGGCGGCATTTCACTCCTTCACGTGTTGACATCTTCCTAAGGCGGAGGTTGCAGTaGGCAGAGATCATGCCATTG | + |
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Preference number: 2 (lower is better) Translates to: SHRTTWRHFTPSRVDIFLRRRLQ*AEIMPL Trigger: CAATGGCATGATCTCTGCTCACTGCAACCTCCGCCT...TAGGAAGATGTCAACACGTGAAGGAGTGAAATGCCGCCATGTGGTTCTGTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| 3UTR CAA 90 bp | TTGTCTCATGGTTCTGAGGGTCAGAAGCCCAAGATCGACGTGCCGTaGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTGGCAGATAGAC | + |
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Preference number: 2 (lower is better) Translates to: LSHGSEGQKPKIDVP*GLVFGEVFLPWQID Trigger: GTCTATCTGCCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGGCACGTCGATCTTGGGCTTCTGACCCTCAGAACCATGAGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| 3UTR-3UTR TCA 90 bp | CAAAAAGAAAAACAGTTACCAGACCATCCTGAGACTTCCCGTGAAACTTCTGCGAGCTACTCGGAAGGCTaGGGTGGGAGGATTGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: QKEKQLPDHPETSRETSASYSEG*GGRIAS Trigger: TGAAGCAATCCTCCCACCTCAGCCTTCCGAGTAGCT...CGCAGAAGTTTCACGGGAAGTCTCAGGATGGTCTGGTAACTGTTTTTCTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| 3UTR-3UTR TCA 90 bp | AAGATCGACGTGCCGTTGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTGGCAGGATACAAAAATTAGCTaGGCATGGTGGTATGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: KIDVPLGLVFGEVFLPWQDTKIS*AWWYVP Trigger: AGGCACATACCACCATGCTCAGCTAATTTTTGTATC...CTGCCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGGCACGTCGATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| 3UTR-3UTR GCA 90 bp | CAAAAAGAAAAACAGTTACCAGACCATCCTGAGACTTCCCGTGAAACTTCTGCGTCTCTAGTAAAACAATaGACACAGAGAGAGAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: QKEKQLPDHPETSRETSASLVKQ*TQREKF Trigger: AAACTTCTCTCTCTGTGTGCATTGTTTTACTAGAGA...CGCAGAAGTTTCACGGGAAGTCTCAGGATGGTCTGGTAACTGTTTTTCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| 3UTR-3UTR CAA 90 bp | CCAAGATCGACGTGCCGTTGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTGGCGCAGAGATCATGCCATaGCACTCCAGCCTGGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: PRSTCRWDWFLVKSFFRGAEIMP*HSSLGD Trigger: GTCACCCAGGCTGGAGTGCAATGGCATGATCTCTGC...GCCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGGCACGTCGATCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| 3UTR CCA 72 bp | GTTTGGAGACAGAGTCGGTCCAGCCACAGAACCACATaGCGGCATTTCACTCCTTCACGTGTTGACATCTTC | + |
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Preference number: 3 (lower is better) Translates to: VWRQSRSSHRTT*RHFTPSRVDIF Trigger: GAAGATGTCAACACGTGAAGGAGTGAAATGCCGCCATGTGGTTCTGTGGCTGGACCGACTCTGTCTCCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| 3UTR CCA 72 bp | CAGAGCCCCAGAATGATTATCTTTCCTAACGGAGTTTaGAGACAGAGTCGGTCCAGCCACAGAACCACATGG | + |
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Preference number: 3 (lower is better) Translates to: QSPRMIIFPNGV*RQSRSSHRTTW Trigger: CCATGTGGTTCTGTGGCTGGACCGACTCTGTCTCCAAACTCCGTTAGGAAAGATAATCATTCTGGGGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| 3UTR CCA 72 bp | CCGTTGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTaGCAGATAGACCCCCTTTCGCTGTGTCCTCAAATG | + |
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Preference number: 3 (lower is better) Translates to: PLGLVFGEVFLP*QIDPLSLCPQM Trigger: CATTTGAGGACACAGCGAAAGGGGGTCTATCTGCCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | ACCCCCTTTCGCTGTGTCCTCAAATGGCCTTTCCAGCCAGGCTTGGTGGCTCACGTCGGAGGATGGGAGTaGGGTCGCAGAAGTAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: TPFRCVLKWPFQPGLVAHVGGWE*GRRSSE Trigger: CTCACTACTTCTGCGACCTCACTCCCATCCTCCGAC...GTGAGCCACCAAGCCTGGCTGGAAAGGCCATTTGAGGACACAGCGAAAGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | ACCCCCTTTCGCTGTGTCCTCAAATGGCCTTTCCAGCCAGGCTTGGTGGCTCACCAGAGGGGACCTTCATaGTGGCCACAAGGATGCGAG | + |
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Preference number: 4 (lower is better) Translates to: TPFRCVLKWPFQPGLVAHQRGPS*WPQGCE Trigger: CTCGCATCCTTGTGGCCATCATGAAGGTCCCCTCTG...GTGAGCCACCAAGCCTGGCTGGAAAGGCCATTTGAGGACACAGCGAAAGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | CGGAGTTTGGAGACAGAGTCGGTCCAGCCACAGAACCACATGGCGGCATTTCACTCTCCTTCACAGTGGTaGGGACCGAGGAGGGACACA | + |
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Preference number: 4 (lower is better) Translates to: RSLETESVQPQNHMAAFHSPSQW*GPRRDT Trigger: TGTGTCCCTCCTCGGTCCTCACCACTGTGAAGGAGA...GTGAAATGCCGCCATGTGGTTCTGTGGCTGGACCGACTCTGTCTCCAAACTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | ACCCCCTTTCGCTGTGTCCTCAAATGGCCTTTCCAGCCAGGCTTGGTGGCTCACGGTGGGTGGATCATTTaGGGTCAGGAGGTCGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: TPFRCVLKWPFQPGLVAHGGWII*GQEVEN Trigger: GTTCTCGACCTCCTGACCTCAAATGATCCACCCACC...GTGAGCCACCAAGCCTGGCTGGAAAGGCCATTTGAGGACACAGCGAAAGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR CCA 90 bp | ACCCCCTTTCGCTGTGTCCTCAAATGGCCTTTCCAGCCAGGCTTGGTGGCTCACAGCCACAGAACCACATaGCGGCATTTCACTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TPFRCVLKWPFQPGLVAHSHRTT*RHFTPS Trigger: TGAAGGAGTGAAATGCCGCCATGTGGTTCTGTGGCT...GTGAGCCACCAAGCCTGGCTGGAAAGGCCATTTGAGGACACAGCGAAAGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR GCA 90 bp | ACCCCCTTTCGCTGTGTCCTCAAATGGCCTTTCCAGCCAGGCTTGGTGGCTCACGGCTATCACCATCCCTaGCACAATGAGGATGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: TPFRCVLKWPFQPGLVAHGYHHP*HNEDED Trigger: ATCTTCATCCTCATTGTGGCAGGGATGGTGATAGCC...GTGAGCCACCAAGCCTGGCTGGAAAGGCCATTTGAGGACACAGCGAAAGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR GCA 90 bp | CCAAGATCGACGTGCCGTTGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTGGCAGAAGGCTTTCTTCCTaGCGCCTGCAGAGGGGACCT | + |
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Preference number: 4 (lower is better) Translates to: PRSTCRWDWFLVKSFFRGRRLSS*RLQRGP Trigger: AGGTCCCCTCTGCAGGCGGCAGGAAGAAAGCCTTCT...GCCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGGCACGTCGATCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR GCA 90 bp | CACAGAACCACATGGCGGCATTTCACTCCTTCACGTGTTGACATCTTCCTAAGAGAGGCACCTCATGGCTaGCGCAGAAAACGAGACGGG | + |
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Preference number: 4 (lower is better) Translates to: HRTTWRHFTPSRVDIFLREAPHG*RRKRDG Trigger: CCCGTCTCGTTTTCTGCGGCAGCCATGAGGTGCCTC...TCTTAGGAAGATGTCAACACGTGAAGGAGTGAAATGCCGCCATGTGGTTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| 3UTR CAA 72 bp | GGTTCTGAGGGTCAGAAGCCCAAGATCGACGTGCCGTaGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GSEGQKPKIDVP*GLVFGEVFLPW Trigger: CCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGGCACGTCGATCTTGGGCTTCTGACCCTCAGAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | CGGAGTTTGGAGACAGAGTCGGTCCAGCCACAGAACCACATGGCGGCATTTCACAACAGAGCCCCAGAATaGTTATCTTTCCTAACGGAG | + |
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Preference number: 4 (lower is better) Translates to: RSLETESVQPQNHMAAFHNRAPE*LSFLTE Trigger: CTCCGTTAGGAAAGATAATCATTCTGGGGCTCTGTT...GTGAAATGCCGCCATGTGGTTCTGTGGCTGGACCGACTCTGTCTCCAAACTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | AAAGAAAAACAGTTACCAGACCATCCTGAGACTTCCCGTGAAACTTCTGCGGCTGGTGGGAGGACTGCTTaGGCCCAGGAGGTCAAGACT | + |
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Preference number: 4 (lower is better) Translates to: KEKQLPDHPETSRETSAAGGRTA*AQEVKT Trigger: AGTCTTGACCTCCTGGGCTCAAGCAGTCCTCCCACC...AGCCGCAGAAGTTTCACGGGAAGTCTCAGGATGGTCTGGTAACTGTTTTTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR CCA 90 bp | CACAGAACCACATGGCGGCATTTCACTCCTTCACGTGTTGACATCTTCCTAAGAGGTGCTGCATGCCTCTaGTCCCAACTACTTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HRTTWRHFTPSRVDIFLRGAACL*SQLLGR Trigger: CCTCCCAAGTAGTTGGGACCAGAGGCATGCAGCACC...TCTTAGGAAGATGTCAACACGTGAAGGAGTGAAATGCCGCCATGTGGTTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | AAGATCGACGTGCCGTTGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTGGCAGGAGGATGTGAGTGAGTaGGATGAAGCAGGAAAACGC | + |
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Preference number: 4 (lower is better) Translates to: KIDVPLGLVFGEVFLPWQEDVSE*DEAGKR Trigger: GCGTTTTCCTGCTTCATCTCACTCACTCACATCCTC...CTGCCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGGCACGTCGATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | CCAAGATCGACGTGCCGTTGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTGGCGGGATTGGTTTTTGGTaGAGTCTTTCTTCCGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PRSTCRWDWFLVKSFFRGGIGFW*SLSSVA Trigger: TGCCACGGAAGAAAGACTTCACCAAAAACCAATCCC...GCCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGGCACGTCGATCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | AAGATCGACGTGCCGTTGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTGGCAGAGGTCAAGACTGCAGTaGGCTATAATCATGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: KIDVPLGLVFGEVFLPWQRSRLQ*AIIMPL Trigger: CAGCGGCATGATTATAGCTCACTGCAGTCTTGACCT...CTGCCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGGCACGTCGATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | AAGATCGACGTGCCGTTGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTGGCAGTGGTGGTCAGGAAGATaGGGTGATCTTTCTGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: KIDVPLGLVFGEVFLPWQWWSGR*GDLSVD Trigger: GTCAACAGAAAGATCACCTCATCTTCCTGACCACCA...CTGCCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGGCACGTCGATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | AAGATCGACGTGCCGTTGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTGGCAGCACTCCTTCACGTGTTaGCATCTTCCTAAGACTCCT | + |
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Preference number: 4 (lower is better) Translates to: KIDVPLGLVFGEVFLPWQHSFTC*HLPKTP Trigger: AGGAGTCTTAGGAAGATGTCAACACGTGAAGGAGTG...CTGCCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGGCACGTCGATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | CACAGAACCACATGGCGGCATTTCACTCCTTCACGTGTTGACATCTTCCTAAGATTGAGCTCAGGAGTTTaGGAGCAGCCTGGACAACAT | + |
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Preference number: 4 (lower is better) Translates to: HRTTWRHFTPSRVDIFLRLSSGV*EQPGQH Trigger: ATGTTGTCCAGGCTGCTCTCAAACTCCTGAGCTCAA...TCTTAGGAAGATGTCAACACGTGAAGGAGTGAAATGCCGCCATGTGGTTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR GCA 90 bp | CAAAAAGAAAAACAGTTACCAGACCATCCTGAGACTTCCCGTGAAACTTCTGCGTCACAGAGGTGTCCGTaGACGAAAGTCGGAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: QKEKQLPDHPETSRETSASQRCP*TKVGGW Trigger: CCATCCTCCGACTTTCGTGCACGGACACCTCTGTGA...CGCAGAAGTTTCACGGGAAGTCTCAGGATGGTCTGGTAACTGTTTTTCTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR GCA 90 bp | AAAAAGAAAAACAGTTACCAGACCATCCTGAGACTTCCCGTGAAACTTCTGCGGGGGCATGGTGCTGCATaGCTCTGGTCCCAACTACTT | + |
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Preference number: 4 (lower is better) Translates to: KKKNSYQTILRLPVKLLRGHGAA*LWSQLL Trigger: AAGTAGTTGGGACCAGAGGCATGCAGCACCATGCCC...CCGCAGAAGTTTCACGGGAAGTCTCAGGATGGTCTGGTAACTGTTTTTCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR CCA 90 bp | CAAAAAGAAAAACAGTTACCAGACCATCCTGAGACTTCCCGTGAAACTTCTGCGTGCAGACAAAGGGCGTaGCTATCACCATCCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QKEKQLPDHPETSRETSACRQRA*LSPSLP Trigger: TGGCAGGGATGGTGATAGCCACGCCCTTTGTCTGCA...CGCAGAAGTTTCACGGGAAGTCTCAGGATGGTCTGGTAACTGTTTTTCTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR CCA 90 bp | AAAAAGAAAAACAGTTACCAGACCATCCTGAGACTTCCCGTGAAACTTCTGCGGCGCTGTGTCCTCAAATaGCCTTTCCAGCCAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: KKKNSYQTILRLPVKLLRRCVLK*PFQPGL Trigger: CAAGCCTGGCTGGAAAGGCCATTTGAGGACACAGCG...CCGCAGAAGTTTCACGGGAAGTCTCAGGATGGTCTGGTAACTGTTTTTCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | CAAAAAGAAAAACAGTTACCAGACCATCCTGAGACTTCCCGTGAAACTTCTGCGCCATCATGGCGATTATaGCGCTGTCCACGATGCCAA | + |
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Preference number: 4 (lower is better) Translates to: QKEKQLPDHPETSRETSAPSWRL*RCPRCQ Trigger: TTGGCATCGTGGACAGCGTCATAATCGCCATGATGG...CGCAGAAGTTTCACGGGAAGTCTCAGGATGGTCTGGTAACTGTTTTTCTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | GTAAAACAATGCACACAGAGAGAGAAGTTTGAAGCTGCAGTGATCTATGATCACAGCTACTCGGAAGGCTaGGGTGGGAGGATTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VKQCTQREKFEAAVIYDHSYSEG*GGRIAS Trigger: TGAAGCAATCCTCCCACCTCAGCCTTCCGAGTAGCT...GTGATCATAGATCACTGCAGCTTCAAACTTCTCTCTCTGTGTGCATTGTTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR GCA 90 bp | GTAAAACAATGCACACAGAGAGAGAAGTTTGAAGCTGCAGTGATCTATGATCACCATAGGAGGCCAGGATaGAGACAAAGGGCGTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: VKQCTQREKFEAAVIYDHHRRPG*RQRAWL Trigger: TAGCCACGCCCTTTGTCTGCATCCTGGCCTCCTATG...GTGATCATAGATCACTGCAGCTTCAAACTTCTCTCTCTGTGTGCATTGTTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR CCA 90 bp | AAAGAAAAACAGTTACCAGACCATCCTGAGACTTCCCGTGAAACTTCTGCGGCTGATAGACGCCAATGGTaGTCCCATAGAAGAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: KEKQLPDHPETSRETSAADRRQW*SHRREQ Trigger: TTGCTCTCTTCTATGGGACCACCATTGGCGTCTATC...AGCCGCAGAAGTTTCACGGGAAGTCTCAGGATGGTCTGGTAACTGTTTTTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | GTAAAACAATGCACACAGAGAGAGAAGTTTGAAGCTGCAGTGATCTATGATCACAGAGGCGTAGGCTCATaGTCTTGGCGTAGTGCAATG | + |
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Preference number: 4 (lower is better) Translates to: VKQCTQREKFEAAVIYDHRGVGS*SWRSAM Trigger: CATTGCACTACGCCAAGATCATGAGCCTACGCCTCT...GTGATCATAGATCACTGCAGCTTCAAACTTCTCTCTCTGTGTGCATTGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | AAAAAGAAAAACAGTTACCAGACCATCCTGAGACTTCCCGTGAAACTTCTGCGGTATCTTTCCTCTTCTTaGCACCATCACCCAGGCATG | + |
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Preference number: 4 (lower is better) Translates to: KKKNSYQTILRLPVKLLRYLSSS*HHHPGM Trigger: CATGCCTGGGTGATGGTGTCAAGAAGAGGAAAGATA...CCGCAGAAGTTTCACGGGAAGTCTCAGGATGGTCTGGTAACTGTTTTTCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR GCA 90 bp | GTAAAACAATGCACACAGAGAGAGAAGTTTGAAGCTGCAGTGATCTATGATCACTTTCTTCCTGCCGCCTaGAGAGGGGACCTTCATGAT | + |
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Preference number: 4 (lower is better) Translates to: VKQCTQREKFEAAVIYDHFLPAA*RGDLHD Trigger: ATCATGAAGGTCCCCTCTGCAGGCGGCAGGAAGAAA...GTGATCATAGATCACTGCAGCTTCAAACTTCTCTCTCTGTGTGCATTGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR TCA 90 bp | AAAGAAAAACAGTTACCAGACCATCCTGAGACTTCCCGTGAAACTTCTGCGGCTGATACAAAAATTAGCTaGGCATGGTGGTATGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KEKQLPDHPETSRETSAADTKIS*AWWYVP Trigger: AGGCACATACCACCATGCTCAGCTAATTTTTGTATC...AGCCGCAGAAGTTTCACGGGAAGTCTCAGGATGGTCTGGTAACTGTTTTTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS TCA 90 bp | GCTGCCGCAGAAAACGAGACGGGCCATCAGGAGGATGTGAGTGAGTaGGATGAAGCAGGAAAACGCCCAGAGGGCGCCGACCAGCAGGCG | + |
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Preference number: 5 (lower is better) Translates to: AAAENETGHQEDVSE*DEAGKRPEGADQQA Trigger: CGCCTGCTGGTCGGCGCCCTCTGGGCGTTTTCCTGCTTCATCTCACTCACTCACATCCTCCTGATGGCCCGTCTCGTTTTCTGCGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429566.3 ENST00000641627.1 |
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| CDS-3UTR CAA 90 bp | ACCCCCTTTCGCTGTGTCCTCAAATGGCCTTTCCAGCCAGGCTTGGTGGCTCACGCAGAGATCATGCCATaGCACTCCAGCCTGGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: TPFRCVLKWPFQPGLVAHAEIMP*HSSLGD Trigger: GTCACCCAGGCTGGAGTGCAATGGCATGATCTCTGC...GTGAGCCACCAAGCCTGGCTGGAAAGGCCATTTGAGGACACAGCGAAAGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR CAA 90 bp | ACCCCCTTTCGCTGTGTCCTCAAATGGCCTTTCCAGCCAGGCTTGGTGGCTCACGAGGTGATCTTTCTGTaGACCAGCTTCCTGAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: TPFRCVLKWPFQPGLVAHEVIFL*TSFLRA Trigger: GGCTCTCAGGAAGCTGGTCAACAGAAAGATCACCTC...GTGAGCCACCAAGCCTGGCTGGAAAGGCCATTTGAGGACACAGCGAAAGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS TCA 90 bp | TCCTATTCACAGAGGTGTCCGTGCACGAAAGTCGGAGGATGGGAGTaGGGTCGCAGAAGTAGTGAGGCACCTCATGGCTGCCGCAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: SYSQRCPCTKVGGWE*GRRSSEAPHGCRRK Trigger: TTTTCTGCGGCAGCCATGAGGTGCCTCACTACTTCTGCGACCTCACTCCCATCCTCCGACTTTCGTGCACGGACACCTCTGTGAATAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429566.3 ENST00000641627.1 |
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| CDS GCA 90 bp | ATAGGAGGCCAGGATGCAGACAAAGGGCGTGGCTATCACCATCCCTaGCACAATGAGGATGAAGATCCTATTCACAGAGGTGTCCGTGCA | + |
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Preference number: 5 (lower is better) Translates to: IGGQDADKGRGYHHP*HNEDEDPIHRGVRA Trigger: TGCACGGACACCTCTGTGAATAGGATCTTCATCCTCATTGTGGCAGGGATGGTGATAGCCACGCCCTTTGTCTGCATCCTGGCCTCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429566.3 ENST00000641627.1 |
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| CDS-3UTR CAA 90 bp | CTTCCTAAGACTCCTCCCCTCACAGTCACTGTGTTATTCGGCCAGGGCTGGTTACATGGGTGTGATTCCTaGGGCTATCTTTCCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LPKTPPLTVTVLFGQGWLHGCDS*GYLSSS Trigger: AGAAGAGGAAAGATAGCCCAAGGAATCACACCCATG...TAACCAGCCCTGGCCGAATAACACAGTGACTGTGAGGGGAGGAGTCTTAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR CAA 90 bp | AAGATCGACGTGCCGTTGGGATTGGTTTTTGGTGAAGTCTTTCTTCCGTGGCAGCTATCTTTCCTCTTCTaGACACCATCACCCAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: KIDVPLGLVFGEVFLPWQLSFLF*TPSPRH Trigger: ATGCCTGGGTGATGGTGTCAAGAAGAGGAAAGATAG...CTGCCACGGAAGAAAGACTTCACCAAAAACCAATCCCAACGGCACGTCGATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS-3UTR CAA 90 bp | CAAAAAGAAAAACAGTTACCAGACCATCCTGAGACTTCCCGTGAAACTTCTGCGCTTGAGCTCAGGAGTTaGAGAGCAGCCTGGACAACA | + |
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Preference number: 5 (lower is better) Translates to: QKEKQLPDHPETSRETSALELRS*RAAWTT Trigger: TGTTGTCCAGGCTGCTCTCAAACTCCTGAGCTCAAG...CGCAGAAGTTTCACGGGAAGTCTCAGGATGGTCTGGTAACTGTTTTTCTTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641627.1 |
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| CDS TCA 72 bp | CAGAGGTGTCCGTGCACGAAAGTCGGAGGATGGGAGTaGGGTCGCAGAAGTAGTGAGGCACCTCATGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QRCPCTKVGGWE*GRRSSEAPHGC Trigger: GCAGCCATGAGGTGCCTCACTACTTCTGCGACCTCACTCCCATCCTCCGACTTTCGTGCACGGACACCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429566.3 ENST00000641627.1 |
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| CDS TCA 72 bp | GAAAACGAGACGGGCCATCAGGAGGATGTGAGTGAGTaGGATGAAGCAGGAAAACGCCCAGAGGGCGCCGAC | + |
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Preference number: 6 (lower is better) Translates to: ENETGHQEDVSE*DEAGKRPEGAD Trigger: GTCGGCGCCCTCTGGGCGTTTTCCTGCTTCATCTCACTCACTCACATCCTCCTGATGGCCCGTCTCGTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000429566.3 ENST00000641627.1 |
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| CDS TCA 72 bp | TGTACATCACCGCAGAAGCTTTCTCCTTCACAGTGGTaGGGACCGAGGAGGGACACAGATAGACGCCAATGG | + |
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Preference number: 6 (lower is better) Translates to: CTSPQKLSPSQW*GPRRDTDRRQW Trigger: CCATTGGCGTCTATCTGTGTCCCTCCTCGGTCCTCACCACTGTGAAGGAGAAAGCTTCTGCGGTGATGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429566.3 ENST00000641627.1 |
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| CDS TCA 72 bp | CCCCCAGAAGTTCCTGAGTCCTGGTGGTCAGGAAGATaGGGTGATCTTTCTGTTGACCAGCTTCCTGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PPEVPESWWSGR*GDLSVDQLPES Trigger: GCTCTCAGGAAGCTGGTCAACAGAAAGATCACCTCATCTTCCTGACCACCAGGACTCAGGAACTTCTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000429566.3 ENST00000641627.1 |
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| CDS GCA 72 bp | CAGGATGCAGACAAAGGGCGTGGCTATCACCATCCCTaGCACAATGAGGATGAAGATCCTATTCACAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: QDADKGRGYHHP*HNEDEDPIHRG Trigger: ACCTCTGTGAATAGGATCTTCATCCTCATTGTGGCAGGGATGGTGATAGCCACGCCCTTTGTCTGCATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429566.3 ENST00000641627.1 |
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