Pregenerated sensors for OPN1SW (Homo sapiens)

Ensembl gene IDs: ENSG00000128617

Ensembl transcript IDs: ENST00000249389.3

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GGAGACGCCAATACCAATGGTCCAGGTAGCCAGGACCACCGTCAGTaGATGCTTGGAGCTGAAGCGGAAGTTGCCGAAGGGCTTACAGAT	+
Preference number: 5 (lower is better) Translates to: GDANTNGPGSQDHRQ*MLGAEAEVAEGLTD Trigger: ATCTGTAAGCCCTTCGGCAACTTCCGCTTCAGCTCCAAGCATGCACTGACGGTGGTCCTGGCTACCTGGACCATTGGTATTGGCGTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS GCA 90 bp	GGCATTGAGTGGGAACCCTATAAGGAAGACAGTGCCCATGAAAGCTaGCTGGAGGTAGAAGGCCCAGACAGGGGCAATGTGGTACTGAGG	+
Preference number: 5 (lower is better) Translates to: GIEWEPYKEDSAHES*LEVEGPDRGNVVLR Trigger: CCTCAGTACCACATTGCCCCTGTCTGGGCCTTCTACCTCCAGGCAGCTTTCATGGGCACTGTCTTCCTTATAGGGTTCCCACTCAATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS GCA 90 bp	ACGCCAATACCAATGGTCCAGGTAGCCAGGACCACCGTCAGTGCATaGTTGGAGCTGAAGCGGAAGTTGCCGAAGGGCTTACAGATGACA	+
Preference number: 5 (lower is better) Translates to: TPIPMVQVARTTVSA*LELKRKLPKGLQMT Trigger: TGTCATCTGTAAGCCCTTCGGCAACTTCCGCTTCAGCTCCAAGCATGCACTGACGGTGGTCCTGGCTACCTGGACCATTGGTATTGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CCA 90 bp	ACCAGACCTGCTACAGTGCCCAGGAAGCCCTCCAAAGCACAAACATaGCGACCGAAGACGAAGTATCCGTTACAGCTGGCGACGAAGACA	+
Preference number: 5 (lower is better) Translates to: TRPATVPRKPSKAQT*RPKTKYPLQLATKT Trigger: TGTCTTCGTCGCCAGCTGTAACGGATACTTCGTCTTCGGTCGCCATGTTTGTGCTTTGGAGGGCTTCCTGGGCACTGTAGCAGGTCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CCA 90 bp	CAACTTTTTGTAGCGCAGTGTGGCCACCAGCACCATGGCATTGAGTaGGAACCCTATAAGGAAGACAGTGCCCATGAAAGCTGCCTGGAG	+
Preference number: 5 (lower is better) Translates to: QLFVAQCGHQHHGIE*EPYKEDSAHESCLE Trigger: CTCCAGGCAGCTTTCATGGGCACTGTCTTCCTTATAGGGTTCCCACTCAATGCCATGGTGCTGGTGGCCACACTGCGCTACAAAAAGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CCA 90 bp	TTGGGGCCAACTTGGGTAGACGAGACAGTAGAAACTTCTGTTTTCTaGGAGCTGCATGTGTCGGATTCATCTGTCATGGCCTTCCCACAC	+
Preference number: 5 (lower is better) Translates to: LGPTWVDETVETSVF*ELHVSDSSVMAFPH Trigger: GTGTGGGAAGGCCATGACAGATGAATCCGACACATGCAGCTCCCAGAAAACAGAAGTTTCTACTGTCTCGTCTACCCAAGTTGGCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CCA 90 bp	GCTGTTGCAAACAGGCCAATATTGGGTCCTCAGTTGGGGCCAACTTaGGTAGACGAGACAGTAGAAACTTCTGTTTTCTGGGAGCTGCAT	+
Preference number: 5 (lower is better) Translates to: AVANRPILGPQLGPT*VDETVETSVFWELH Trigger: ATGCAGCTCCCAGAAAACAGAAGTTTCTACTGTCTCGTCTACCCAAGTTGGCCCCAACTGAGGACCCAATATTGGCCTGTTTGCAACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS GCA 72 bp	CCAATGGTCCAGGTAGCCAGGACCACCGTCAGTGCATaGTTGGAGCTGAAGCGGAAGTTGCCGAAGGGCTTA	+
Preference number: 6 (lower is better) Translates to: PMVQVARTTVSA*LELKRKLPKGL Trigger: TAAGCCCTTCGGCAACTTCCGCTTCAGCTCCAAGCATGCACTGACGGTGGTCCTGGCTACCTGGACCATTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CAA 72 bp	ATGGTCCAGGTAGCCAGGACCACCGTCAGTGCATGCTaGGAGCTGAAGCGGAAGTTGCCGAAGGGCTTACAG	+
Preference number: 6 (lower is better) Translates to: MVQVARTTVSAC*ELKRKLPKGLQ Trigger: CTGTAAGCCCTTCGGCAACTTCCGCTTCAGCTCCAAGCATGCACTGACGGTGGTCCTGGCTACCTGGACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS GCA 72 bp	AATACCAATGGTCCAGGTAGCCAGGACCACCGTCAGTaGATGCTTGGAGCTGAAGCGGAAGTTGCCGAAGGG	+
Preference number: 6 (lower is better) Translates to: NTNGPGSQDHRQ*MLGAEAEVAEG Trigger: CCCTTCGGCAACTTCCGCTTCAGCTCCAAGCATGCACTGACGGTGGTCCTGGCTACCTGGACCATTGGTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS GCA 72 bp	AGAGGAACCACGTATAGGACTCGCTGCGGTATTTGGTaGCCACGGTGTACCAGTCAGGGCCACAGGAACACT	+
Preference number: 6 (lower is better) Translates to: RGTTYRTRCGIW*PRCTSQGHRNT Trigger: AGTGTTCCTGTGGCCCTGACTGGTACACCGTGGGCACCAAATACCGCAGCGAGTCCTATACGTGGTTCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CCA 72 bp	GTAGCGCAGTGTGGCCACCAGCACCATGGCATTGAGTaGGAACCCTATAAGGAAGACAGTGCCCATGAAAGC	+
Preference number: 6 (lower is better) Translates to: VAQCGHQHHGIE*EPYKEDSAHES Trigger: GCTTTCATGGGCACTGTCTTCCTTATAGGGTTCCCACTCAATGCCATGGTGCTGGTGGCCACACTGCGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CAA 90 bp	CCAATACCAATGGTCCAGGTAGCCAGGACCACCGTCAGTGCATGCTaGGAGCTGAAGCGGAAGTTGCCGAAGGGCTTACAGATGACAATG	+
Preference number: 6 (lower is better) Translates to: PIPMVQVARTTVSAC*ELKRKLPKGLQMTM Trigger: CATTGTCATCTGTAAGCCCTTCGGCAACTTCCGCTTCAGCTCCAAGCATGCACTGACGGTGGTCCTGGCTACCTGGACCATTGGTATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CCA 72 bp	AATGAAGGAATGGTGACAAGCCGTAAGTCCAGCCCATaGTTACGGTTGTTGACCATGTACATGGCGAAGGCC	+
Preference number: 6 (lower is better) Translates to: NEGMVTSRKSSP*LRLLTMYMAKA Trigger: GGCCTTCGCCATGTACATGGTCAACAACCGTAACCATGGGCTGGACTTACGGCTTGTCACCATTCCTTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CAA 90 bp	AGCTGTTGCAAACAGGCCAATATTGGGTCCTCAGTTGGGGCCAACTaGGGTAGACGAGACAGTAGAAACTTCTGTTTTCTGGGAGCTGCA	+
Preference number: 6 (lower is better) Translates to: SCCKQANIGSSVGAN*GRRDSRNFCFLGAA Trigger: TGCAGCTCCCAGAAAACAGAAGTTTCTACTGTCTCGTCTACCCAAGTTGGCCCCAACTGAGGACCCAATATTGGCCTGTTTGCAACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CAA 72 bp	CTAGCTGTTGCAAACAGGCCAATATTGGGTCCTCAGTaGGGGCCAACTTGGGTAGACGAGACAGTAGAAACT	+
Preference number: 6 (lower is better) Translates to: LAVANRPILGPQ*GPTWVDETVET Trigger: AGTTTCTACTGTCTCGTCTACCCAAGTTGGCCCCAACTGAGGACCCAATATTGGCCTGTTTGCAACAGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS TCA 72 bp	AGATGCAAGCACTCTTGGAGAAGAATGAAGGAATGGTaGCAAGCCGTAAGTCCAGCCCATGGTTACGGTTGT	+
Preference number: 6 (lower is better) Translates to: RCKHSWRRMKEW*QAVSPAHGYGC Trigger: ACAACCGTAACCATGGGCTGGACTTACGGCTTGTCACCATTCCTTCATTCTTCTCCAAGAGTGCTTGCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CCA 72 bp	ACTTGGGTAGACGAGACAGTAGAAACTTCTGTTTTCTaGGAGCTGCATGTGTCGGATTCATCTGTCATGGCC	+
Preference number: 6 (lower is better) Translates to: TWVDETVETSVF*ELHVSDSSVMA Trigger: GGCCATGACAGATGAATCCGACACATGCAGCTCCCAGAAAACAGAAGTTTCTACTGTCTCGTCTACCCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CAA 72 bp	AAACAGGCCAATATTGGGTCCTCAGTTGGGGCCAACTaGGGTAGACGAGACAGTAGAAACTTCTGTTTTCTG	+
Preference number: 6 (lower is better) Translates to: KQANIGSSVGAN*GRRDSRNFCFL Trigger: CAGAAAACAGAAGTTTCTACTGTCTCGTCTACCCAAGTTGGCCCCAACTGAGGACCCAATATTGGCCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249389.3
CDS CAA 90 bp	AATTTAATTCTAGCTGTTGCAAACAGGCCAATATTGGGTCCTCAGTaGGGGCCAACTTGGGTAGACGAGACAGTAGAAACTTCTGTTTTC	+
Preference number: 6 (lower is better) Translates to: NLILAVANRPILGPQ*GPTWVDETVETSVF Trigger: GAAAACAGAAGTTTCTACTGTCTCGTCTACCCAAGTTGGCCCCAACTGAGGACCCAATATTGGCCTGTTTGCAACAGCTAGAATTAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000249389.3