Pregenerated sensors for ODF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000155087Ensembl transcript IDs: ENST00000285402.4, ENST00000518835.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGACCTGGCTGGAGTAACTaGCTTCTATTAAGTAATGGG | + |
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Preference number: 2 (lower is better) Translates to: PTYFNNRGHGKERRNIGRPGWSN*LLLSNG Trigger: CCCATTACTTAATAGAAGTCAGTTACTCCAGCCAGG...TCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGCCTGGCTGGAGTAACTaGCTTCTATTAAGTAATGGG | + |
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Preference number: 2 (lower is better) Translates to: FPTYFNNRGHGKERRNIGPGWSN*LLLSNG Trigger: CCCATTACTTAATAGAAGTCAGTTACTCCAGCCAGG...CCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR GCA 90 bp | CTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGATGGGCTGCACGGGTTaGAGGGGCTGCAGGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LRTSTTGAMGRRGETLGEMGCTG*RGCRGC Trigger: GCAACCCCTGCAGCCCCTGCAACCCGTGCAGCCCAT...CTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR GCA 90 bp | TTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGATGGGCTGCACGGGTTaGAGGGGCTGCAGGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: FPTYFNNRGHGKERRNIGMGCTG*RGCRGC Trigger: GCAACCCCTGCAGCCCCTGCAACCCGTGCAGCCCAT...CCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR TCA 90 bp | TACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGCCAGGCCGCAAGAGCGTaGTCGCTTGGAATAGCACAA | + |
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Preference number: 4 (lower is better) Translates to: YVLQQQGPWEGEEKHWESQAARA*SLGIAQ Trigger: TTGTGCTATTCCAAGCGATCACGCTCTTGCGGCCTG...GCTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR GCA 90 bp | CCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGGCTGCAAGGAGAAGTaGAAGGGTAGCAAGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: PTYFNNRGHGKERRNIGRGCKEK*KGSKET Trigger: AGTCTCCTTGCTACCCTTGCACTTCTCCTTGCAGCC...TCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR TCA 90 bp | CCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGATCCTCTCCAAACTTCTaGGAGATGGTCGCAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: PTYFNNRGHGKERRNIGRSSPNF*EMVADS Trigger: ACTGTCTGCGACCATCTCTCAGAAGTTTGGAGAGGA...TCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR TCA 90 bp | GTTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGCACAGGGCGGCAAGCTaGACTCTTTGCAGATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: VSYVLQQQGPWEGEEKHWHRAAS*TLCRCS Trigger: TGAACATCTGCAAAGAGTTCAGCTTGCCGCCCTGTG...CCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR GCA 90 bp | CTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGAGGGATAACACGGGTTaGAAGGATCATATGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LRTSTTGAMGRRGETLGERDNTG*KDHMGC Trigger: GCAGCCCATATGATCCTTGCAACCCGTGTTATCCCT...CTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR GCA 90 bp | CCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAAGGGATAACACGGGTTaGAAGGATCATATGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PTYFNNRGHGKERRNIGRRDNTG*KDHMGC Trigger: GCAGCCCATATGATCCTTGCAACCCGTGTTATCCCT...TCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR GCA 90 bp | CTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGAAACATTGGGAGAGCTaGCTGGCTGGAGTAACTGAC | + |
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Preference number: 4 (lower is better) Translates to: LRTSTTGAMGRRGETLGEKHWES*LAGVTD Trigger: GTCAGTTACTCCAGCCAGGCAGCTCTCCCAATGTTT...CTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR GCA 90 bp | CCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAAAACATTGGGAGAGCTaGCTGGCTGGAGTAACTGAC | + |
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Preference number: 4 (lower is better) Translates to: PTYFNNRGHGKERRNIGRKHWES*LAGVTD Trigger: GTCAGTTACTCCAGCCAGGCAGCTCTCCCAATGTTT...TCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR CCA 90 bp | TACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGCATCACACAGGCAACATaGGTAGAGATCACACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: YVLQQQGPWEGEEKHWESITQAT*VEITQA Trigger: GGCCTGTGTGATCTCTACCCATGTTGCCTGTGTGAT...GCTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR CCA 90 bp | CCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGACAACAACAGGGGCCATaGGAAGGAGAGGAGAAACAT | + |
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Preference number: 4 (lower is better) Translates to: PTYFNNRGHGKERRNIGRQQQGP*EGEEKH Trigger: ATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTG...TCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR TCA 90 bp | CCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGACACCTGATTGTTCTGTaGGTACCTTTGGGAAATGGC | + |
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Preference number: 4 (lower is better) Translates to: PTYFNNRGHGKERRNIGRHLIVL*VPLGNG Trigger: GCCATTTCCCAAAGGTACTCACAGAACAATCAGGTG...TCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR CCA 90 bp | GTTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGCAAGCAGTACGGATATaGGTGCAAGTCACAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VSYVLQQQGPWEGEEKHWQAVRI*VQVTAA Trigger: TGCTGCTGTGACTTGCACCCATATCCGTACTGCTTG...CCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR CCA 90 bp | TACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGCAAGAGCGTGATCGCTTaGAATAGCACAAGCAGTACG | + |
|
Preference number: 4 (lower is better) Translates to: YVLQQQGPWEGEEKHWESKSVIA*NSTSST Trigger: CGTACTGCTTGTGCTATTCCAAGCGATCACGCTCTT...GCTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR CCA 90 bp | TTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGCAACAACAGGGGCCATaGGAAGGAGAGGAGAAACAT | + |
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Preference number: 4 (lower is better) Translates to: FPTYFNNRGHGKERRNIGQQQGP*EGEEKH Trigger: ATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTG...CCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR TCA 90 bp | TACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGCTCTTTATGTCCCTTCTaGCACTGTCCAAGAGACAAC | + |
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Preference number: 4 (lower is better) Translates to: YVLQQQGPWEGEEKHWESSLCPF*HCPRDN Trigger: GTTGTCTCTTGGACAGTGTCAGAAGGGACATAAAGA...GCTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR TCA 90 bp | CTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGCCTTCACTCGAACTTTaGCTTGATCGGGTTCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: LRTSTTGAMGRRGETLGEPSLEL*LDRVQN Trigger: GTTTTGAACCCGATCAAGTCAAAGTTCGAGTGAAGG...CTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR TCA 90 bp | TACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGCCCTGGCTGGAGTAACTaGCTTCTATTAAGTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: YVLQQQGPWEGEEKHWESPGWSN*LLLSNG Trigger: CCCATTACTTAATAGAAGTCAGTTACTCCAGCCAGG...GCTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR GCA 90 bp | GTTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGTCGATGCATCTCAGTTaGCTTAGTTCTCTGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: VSYVLQQQGPWEGEEKHWSMHLS*LSSLST Trigger: GGTGGACAGAGAACTAAGGCAACTGAGATGCATCGA...CCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR CCA 90 bp | GTTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGTTCTGTGAGTACCTTTaGGAAATGGCACTCCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VSYVLQQQGPWEGEEKHWFCEYL*EMALRE Trigger: TTCCCGGAGTGCCATTTCCCAAAGGTACTCACAGAA...CCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR CCA 90 bp | CCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGATCAGTGCAGCCATTATaGTCACACCTGATTGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PTYFNNRGHGKERRNIGRSVQPL*SHLIVL Trigger: CAGAACAATCAGGTGTGACCATAATGGCTGCACTGA...TCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR TCA 90 bp | GTTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGACTCGAACTTTGACTTaGTCGGGTTCAAAACCGCAT | + |
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Preference number: 4 (lower is better) Translates to: VSYVLQQQGPWEGEEKHWTRTLT*SGSKPH Trigger: ATGCGGTTTTGAACCCGATCAAGTCAAAGTTCGAGT...CCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR TCA 90 bp | GTTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGCCTTCACTCGAACTTTaGCTTGATCGGGTTCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: VSYVLQQQGPWEGEEKHWPSLEL*LDRVQN Trigger: GTTTTGAACCCGATCAAGTCAAAGTTCGAGTGAAGG...CCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR GCA 90 bp | CTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGATCCTAAAATGTTACTaGTACAGCAGGAGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LRTSTTGAMGRRGETLGEILKCY*YSRRKP Trigger: TGGCTTCCTCCTGCTGTAGCAGTAACATTTTAGGAT...CTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR CCA 90 bp | TACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGCCAAACTTCTGAGAGATaGTCGCAGACAGTAAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: YVLQQQGPWEGEEKHWESQTSER*SQTVKL Trigger: AAGCTTTACTGTCTGCGACCATCTCTCAGAAGTTTG...GCTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR CCA 90 bp | CCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGATTGTTCTTCTCAGTTTaGCAAGCTCTCGCTTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PTYFNNRGHGKERRNIGRLFFSV*QALASH Trigger: ATGAGAAGCGAGAGCTTGCCAAACTGAGAAGAACAA...TCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR TCA 90 bp | TTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGCATTATGGTCACACCTaGTTGTTCTGTGAGTACCTT | + |
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Preference number: 4 (lower is better) Translates to: FPTYFNNRGHGKERRNIGHYGHT*LFCEYL Trigger: AAGGTACTCACAGAACAATCAGGTGTGACCATAATG...CCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR TCA 90 bp | AGTTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGACTCGAACTTTGACTTaGTCGGGTTCAAAACCGCAT | + |
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Preference number: 4 (lower is better) Translates to: SFLRTSTTGAMGRRGETLTRTLT*SGSKPH Trigger: ATGCGGTTTTGAACCCGATCAAGTCAAAGTTCGAGT...CAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR GCA 90 bp | CTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGAGTAATGGGTTCCTATaGGCACTTTACAAAATCATC | + |
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Preference number: 4 (lower is better) Translates to: LRTSTTGAMGRRGETLGESNGFL*ALYKII Trigger: GATGATTTTGTAAAGTGCGCATAGGAACCCATTACT...CTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR GCA 90 bp | TTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGTAATGGGTTCCTATaGGCACTTTACAAAATCATC | + |
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Preference number: 4 (lower is better) Translates to: FPTYFNNRGHGKERRNIGSNGFL*ALYKII Trigger: GATGATTTTGTAAAGTGCGCATAGGAACCCATTACT...CCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS-3UTR CAA 90 bp | TTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGTATGGGCTGCACGGGTaGCAGGGGCTGCAGGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: FPTYFNNRGHGKERRNIGYGLHG*QGLQGL Trigger: CAACCCCTGCAGCCCCTGCAACCCGTGCAGCCCATA...CCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS CCA 90 bp | GGCAACATGGGTAGAGATCACACAGGCCGCAAGAGCGTGATCGCTTaGAATAGCACAAGCAGTACGGATATGGGTGCAAGTCACAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GNMGRDHTGRKSVIA*NSTSSTDMGASHSS Trigger: GCTGCTGTGACTTGCACCCATATCCGTACTGCTTGTGCTATTCCAAGCGATCACGCTCTTGCGGCCTGTGTGATCTCTACCCATGTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR CAA 90 bp | GTTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGCAAGGAGACTCGATCTaGACACAGCTGCCGAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: VSYVLQQQGPWEGEEKHWQGDSI*TQLPSP Trigger: TGGGCTCGGCAGCTGTGTCAAGATCGAGTCTCCTTG...CCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS TCA 90 bp | ATCACACAGGCAACATGGGTAGAGATCACACAGGCCGCAAGAGCGTaGTCGCTTGGAATAGCACAAGCAGTACGGATATGGGTGCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: ITQATWVEITQAARA*SLGIAQAVRIWVQV Trigger: GACTTGCACCCATATCCGTACTGCTTGTGCTATTCCAAGCGATCACGCTCTTGCGGCCTGTGTGATCTCTACCCATGTTGCCTGTGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS TCA 90 bp | AGGGGCTGCAAGGAGAAGTGCAAGGGTAGCAAGGAGACTCGATCTTaGCACAGCTGCCGAGCCCATAGGAGTATGTTACATCCTTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: RGCKEKCKGSKETRS*HSCRAHRSMLHPSH Trigger: ATGAGAAGGATGTAACATACTCCTATGGGCTCGGCAGCTGTGTCAAGATCGAGTCTCCTTGCTACCCTTGCACTTCTCCTTGCAGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR CAA 90 bp | CTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGAGAGCACTCGAACTTTGACTaGATCGGGTTCAAAACCGCA | + |
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Preference number: 5 (lower is better) Translates to: LRTSTTGAMGRRGETLGEHSNFD*IGFKTA Trigger: TGCGGTTTTGAACCCGATCAAGTCAAAGTTCGAGTG...CTCTCCCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS GCA 90 bp | AAGTCGCACAGGCACCGTGTGCTAAATTCGTCGATGCATCTCAGTTaGCTTAGTTCTCTGTCCACCTTCTTTATGTCCCTTCTGACACTG | + |
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Preference number: 5 (lower is better) Translates to: KSHRHRVLNSSMHLS*LSSLSTFFMSLLTL Trigger: CAGTGTCAGAAGGGACATAAAGAAGGTGGACAGAGAACTAAGGCAACTGAGATGCATCGACGAATTTAGCACACGGTGCCTGTGCGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR CAA 90 bp | GTTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGGTTGTTCTTCTCAGTTaGGCAAGCTCTCGCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: VSYVLQQQGPWEGEEKHWVVLLS*ASSRFS Trigger: TGAGAAGCGAGAGCTTGCCAAACTGAGAAGAACAAC...CCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS-3UTR CAA 90 bp | GTTTCCTACGTACTTCAACAACAGGGGCCATGGGAAGGAGAGGAGAAACATTGGCACTCGAACTTTGACTaGATCGGGTTCAAAACCGCA | + |
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Preference number: 5 (lower is better) Translates to: VSYVLQQQGPWEGEEKHWHSNFD*IGFKTA Trigger: TGCGGTTTTGAACCCGATCAAGTCAAAGTTCGAGTG...CCAATGTTTCTCCTCTCCTTCCCATGGCCCCTGTTGTTGAAGTACGTAGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS TCA 90 bp | GACACTGTCCAAGAGACAACTCAGTGCAGCCATTATGGTCACACCTaGTTGTTCTGTGAGTACCTTTGGGAAATGGCACTCCGGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: DTVQETTQCSHYGHT*LFCEYLWEMALREK Trigger: TTTTTCCCGGAGTGCCATTTCCCAAAGGTACTCACAGAACAATCAGGTGTGACCATAATGGCTGCACTGAGTTGTCTCTTGGACAGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS TCA 90 bp | ATCTCAGTTGCCTTAGTTCTCTGTCCACCTTCTTTATGTCCCTTCTaGCACTGTCCAAGAGACAACTCAGTGCAGCCATTATGGTCACAC | + |
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Preference number: 5 (lower is better) Translates to: ISVALVLCPPSLCPF*HCPRDNSVQPLWSH Trigger: GTGTGACCATAATGGCTGCACTGAGTTGTCTCTTGGACAGTGTCAGAAGGGACATAAAGAAGGTGGACAGAGAACTAAGGCAACTGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS TCA 90 bp | CATAGGAGTATGTTACATCCTTCTCATCCACACAGGGCGGCAAGCTaGACTCTTTGCAGATGTTCATGTAGCTGTACTTTTTCGATCCAA | + |
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Preference number: 5 (lower is better) Translates to: HRSMLHPSHPHRAAS*TLCRCSCSCTFSIQ Trigger: TTGGATCGAAAAAGTACAGCTACATGAACATCTGCAAAGAGTTCAGCTTGCCGCCCTGTGTGGATGAGAAGGATGTAACATACTCCTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS CCA 90 bp | ATCTTCTATGGCTCTGATGGCTTTCCTCTCCAAACTTCTGAGAGATaGTCGCAGACAGTAAAGCTTATAATCACACAGGCAACATGGGTA | + |
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Preference number: 5 (lower is better) Translates to: IFYGSDGFPLQTSER*SQTVKLIITQATWV Trigger: TACCCATGTTGCCTGTGTGATTATAAGCTTTACTGTCTGCGACCATCTCTCAGAAGTTTGGAGAGGAAAGCCATCAGAGCCATAGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS TCA 90 bp | TCAGCCGACACACATACCTTTCCATCCTTCACTCGAACTTTGACTTaGTCGGGTTCAAAACCGCATACATTCACCGATCCTAAAATGTTA | + |
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Preference number: 5 (lower is better) Translates to: SADTHTFPSFTRTLT*SGSKPHTFTDPKML Trigger: TAACATTTTAGGATCGGTGAATGTATGCGGTTTTGAACCCGATCAAGTCAAAGTTCGAGTGAAGGATGGAAAGGTATGTGTGTCGGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS GCA 90 bp | GATCGGGTTCAAAACCGCATACATTCACCGATCCTAAAATGTTACTaGTACAGCAGGAGGAAGCCAGAATTCTATTTGTTGTTCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: DRVQNRIHSPILKCY*YSRRKPEFYLLFFS Trigger: TGAGAAGAACAACAAATAGAATTCTGGCTTCCTCCTGCTGTAGCAGTAACATTTTAGGATCGGTGAATGTATGCGGTTTTGAACCCGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS GCA 72 bp | TACAGGAAAATCGGCTTCCACAGGGATAACACGGGTTaGAAGGATCATATGGGCTGCACGGGTTGCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: YRKIGFHRDNTG*KDHMGCTGCRG Trigger: GCCCCTGCAACCCGTGCAGCCCATATGATCCTTGCAACCCGTGTTATCCCTGTGGAAGCCGATTTTCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS TCA 72 bp | GCAACATGGGTAGAGATCACACAGGCCGCAAGAGCGTaGTCGCTTGGAATAGCACAAGCAGTACGGATATGG | + |
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Preference number: 6 (lower is better) Translates to: ATWVEITQAARA*SLGIAQAVRIW Trigger: CCATATCCGTACTGCTTGTGCTATTCCAAGCGATCACGCTCTTGCGGCCTGTGTGATCTCTACCCATGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS TCA 72 bp | AAGGAGAAGTGCAAGGGTAGCAAGGAGACTCGATCTTaGCACAGCTGCCGAGCCCATAGGAGTATGTTACAT | + |
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Preference number: 6 (lower is better) Translates to: KEKCKGSKETRS*HSCRAHRSMLH Trigger: ATGTAACATACTCCTATGGGCTCGGCAGCTGTGTCAAGATCGAGTCTCCTTGCTACCCTTGCACTTCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS CAA 72 bp | CTGCAGGGGCTTTCCATCCTTCACTCGAACTTTGACTaGATCGGGTTCAAAACCGCATACATTCACCGATCC | + |
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Preference number: 6 (lower is better) Translates to: LQGLSILHSNFD*IGFKTAYIHRS Trigger: GGATCGGTGAATGTATGCGGTTTTGAACCCGATCAAGTCAAAGTTCGAGTGAAGGATGGAAAGCCCCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518835.1 |
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| CDS TCA 72 bp | TGCAGGGGCTTTCCATCCTTCACTCGAACTTTGACTTaGTCGGGTTCAAAACCGCATACATTCACCGATCCT | + |
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Preference number: 6 (lower is better) Translates to: CRGFPSFTRTLT*SGSKPHTFTDP Trigger: AGGATCGGTGAATGTATGCGGTTTTGAACCCGATCAAGTCAAAGTTCGAGTGAAGGATGGAAAGCCCCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518835.1 |
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| CDS TCA 72 bp | CAAGAGACAACTCAGTGCAGCCATTATGGTCACACCTaGTTGTTCTGTGAGTACCTTTGGGAAATGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: QETTQCSHYGHT*LFCEYLWEMAL Trigger: GAGTGCCATTTCCCAAAGGTACTCACAGAACAATCAGGTGTGACCATAATGGCTGCACTGAGTTGTCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS TCA 72 bp | GGAGAAACATTGGGAGAGCTGCCTGGCTGGAGTAACTaGCTTCTATTAAGTAATGGGTTCCTATGCGCACTT | + |
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Preference number: 6 (lower is better) Translates to: GETLGELPGWSN*LLLSNGFLCAL Trigger: AAGTGCGCATAGGAACCCATTACTTAATAGAAGTCAGTTACTCCAGCCAGGCAGCTCTCCCAATGTTTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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| CDS GCA 72 bp | AGGCACCGTGTGCTAAATTCGTCGATGCATCTCAGTTaGCTTAGTTCTCTGTCCACCTTCTTTATGTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: RHRVLNSSMHLS*LSSLSTFFMSL Trigger: AAGGGACATAAAGAAGGTGGACAGAGAACTAAGGCAACTGAGATGCATCGACGAATTTAGCACACGGTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS CAA 72 bp | CACACATACCTTTCCATCCTTCACTCGAACTTTGACTaGATCGGGTTCAAAACCGCATACATTCACCGATCC | + |
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Preference number: 6 (lower is better) Translates to: HTYLSILHSNFD*IGFKTAYIHRS Trigger: GGATCGGTGAATGTATGCGGTTTTGAACCCGATCAAGTCAAAGTTCGAGTGAAGGATGGAAAGGTATGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS TCA 72 bp | ACACATACCTTTCCATCCTTCACTCGAACTTTGACTTaGTCGGGTTCAAAACCGCATACATTCACCGATCCT | + |
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Preference number: 6 (lower is better) Translates to: THTFPSFTRTLT*SGSKPHTFTDP Trigger: AGGATCGGTGAATGTATGCGGTTTTGAACCCGATCAAGTCAAAGTTCGAGTGAAGGATGGAAAGGTATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS TCA 72 bp | ATGTTACATCCTTCTCATCCACACAGGGCGGCAAGCTaGACTCTTTGCAGATGTTCATGTAGCTGTACTTTT | + |
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Preference number: 6 (lower is better) Translates to: MLHPSHPHRAAS*TLCRCSCSCTF Trigger: AAAAGTACAGCTACATGAACATCTGCAAAGAGTTCAGCTTGCCGCCCTGTGTGGATGAGAAGGATGTAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS CAA 72 bp | TACTGCTACAGCAGGAGGAAGCCAGAATTCTATTTGTaGTTCTTCTCAGTTTGGCAAGCTCTCGCTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: YCYSRRKPEFYL*FFSVWQALASH Trigger: ATGAGAAGCGAGAGCTTGCCAAACTGAGAAGAACAACAAATAGAATTCTGGCTTCCTCCTGCTGTAGCAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285402.4 |
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| CDS GCA 72 bp | CAAAACCGCATACATTCACCGATCCTAAAATGTTACTaGTACAGCAGGAGGAAGCCAGAATTCTATTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: QNRIHSPILKCY*YSRRKPEFYLL Trigger: CAACAAATAGAATTCTGGCTTCCTCCTGCTGTAGCAGTAACATTTTAGGATCGGTGAATGTATGCGGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000285402.4 ENST00000518835.1 |
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