Pregenerated sensors for OBP2A (Homo sapiens)
Ensembl gene IDs: ENSG00000122136Ensembl transcript IDs: ENST00000471886.5, ENST00000537747.5
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CAGACCCGGGGGCTGCCTAGTGTTCGAGAACGCAGCTTCCCGTCTGCAGGGGCACGTACCAGGTCCCTGTaGTATCCTCCTCCTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: QTRGLPSVRERSFPSAGARTRSL*YPPPPG Trigger: CCCTGGAGGAGGAGGATATCACAGGGACCTGGTACG...TGCCCCTGCAGACGGGAAGCTGCGTTCTCGAACACTAGGCAGCCCCCGGGTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000471886.5 |
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| CDS-3UTR GCA 90 bp | AGGTGCAGACCCGGGGGCTGCCTAGTGTTCGAGAACGCAGCTTCCCGTCTGCAGACGCAGCTTCCCGTCTaGAGGGGCATGAAAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCRPGGCLVFENAASRLQTQLPV*RGMKMS Trigger: GGACATTTTCATGCCCCTGCAGACGGGAAGCTGCGT...CTGCAGACGGGAAGCTGCGTTCTCGAACACTAGGCAGCCCCCGGGTCTGCACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000471886.5 ENST00000537747.5 |
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| CDS-3UTR GCA 90 bp | TGGAGGTGCAGACCCGGGGGCTGCCTAGTGTTCGAGAACGCAGCTTCCCGTCTGACGCAGCTTCCCGTCTaGAGGGGCATGAAAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WRCRPGGCLVFENAASRLTQLPV*RGMKMS Trigger: GGACATTTTCATGCCCCTGCAGACGGGAAGCTGCGT...CAGACGGGAAGCTGCGTTCTCGAACACTAGGCAGCCCCCGGGTCTGCACCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000471886.5 ENST00000537747.5 |
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| CDS-3UTR GCA 90 bp | CAGACCCGGGGGCTGCCTAGTGTTCGAGAACGCAGCTTCCCGTCTGCAGGGGCACACGGCGCTGGTCTTTaGAGTAAAAGACGTAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTRGLPSVRERSFPSAGAHGAGL*SKRRSR Trigger: ACGACTACGTCTTTTACTGCAAAGACCAGCGCCGTG...TGCCCCTGCAGACGGGAAGCTGCGTTCTCGAACACTAGGCAGCCCCCGGGTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000471886.5 ENST00000537747.5 |
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| CDS-3UTR GCA 90 bp | TGGAGGTGCAGACCCGGGGGCTGCCTAGTGTTCGAGAACGCAGCTTCCCGTCTGCACGGCGCTGGTCTTTaGAGTAAAAGACGTAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WRCRPGGCLVFENAASRLHGAGL*SKRRSR Trigger: ACGACTACGTCTTTTACTGCAAAGACCAGCGCCGTG...CAGACGGGAAGCTGCGTTCTCGAACACTAGGCAGCCCCCGGGTCTGCACCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000471886.5 ENST00000537747.5 |
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