RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for NXPH3 (Homo sapiens)

Ensembl gene IDs: ENSG00000182575

Ensembl transcript IDs: ENST00000328741.6, ENST00000513748.1, ENST00000570453.1

Found 430 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTCCCTGCCTGAGGCCCAACCCCTTCCCTGCCCGGTGTCCAGATaGTCTCCTGCATGGGCAGGCCTGTCCTTCCAGCCCTGGCCTGGC +
Preference number: 1 (lower is better)
Translates to: PSLPEAQPLPCPVSR*SPAWAGLSFQPWPG
Trigger: GCCAGGCCAGGGCTGGAAGGACAGGCCTGCCCATGCAGGAGACCATCTGGACACCGGGCAGGGAAGGGGTTGGGCCTCAGGCAGGGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 90 bp GCTGCTGAGAGGGCGGCGCCATCCAGATCCGGGAGAACCCCGGTCTaGCAGGTGAGGCTGACTGTTGAGGGACCCCTCTCCGGGACATGG +
Preference number: 1 (lower is better)
Translates to: AAERAAPSRSGRTPV*QVRLTVEGPLSGTW
Trigger: CCATGTCCCGGAGAGGGGTCCCTCAACAGTCAGCCTCACCTGTCAGACCGGGGTTCTCCCGGATCTGGATGGCGCCGCCCTCTCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 90 bp GCCTGCCCACAGGCCTCGGGGACCCAGCATCTCTCTGTGGCTCCGTaGCAAAGCCCTGTGAGGCTGCACAGAGAGCCCACTCCTCCTCCA +
Preference number: 1 (lower is better)
Translates to: ACPQASGTQHLSVAP*QSPVRLHREPTPPP
Trigger: TGGAGGAGGAGTGGGCTCTCTGTGCAGCCTCACAGGGCTTTGCCACGGAGCCACAGAGAGATGCTGGGTCCCCGAGGCCTGTGGGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 90 bp GTGGGGGATCAGACAGCTTGGAACCGGGGCTGGAGAGGGAAGCCCTaGGCCCTCAGCAAACATCAGCGCCAAGGGCGGTTGGATCCCTGC +
Preference number: 1 (lower is better)
Translates to: VGDQTAWNRGWRGKP*ALSKHQRQGRLDPC
Trigger: GCAGGGATCCAACCGCCCTTGGCGCTGATGTTTGCTGAGGGCTCAGGGCTTCCCTCTCCAGCCCCGGTTCCAAGCTGTCTGATCCCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp GTGGGCTGTAACCAGATGGCTTCTCAGCCCCACCCAACTCTGCGCTaGAGTATGAGGGGACCAGTTTGCGCGGAGCGCTGGTGGGCAGGG +
Preference number: 1 (lower is better)
Translates to: VGCNQMASQPHPTLR*SMRGPVCAERWWAG
Trigger: CCCTGCCCACCAGCGCTCCGCGCAAACTGGTCCCCTCATACTGCAGCGCAGAGTTGGGTGGGGCTGAGAAGCCATCTGGTTACAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 90 bp TCCACAGCACTGTGGGAGGCTGAACGGCACACGGTGGGTGTCCATTaGTGGGCTGCTCCAGTGCCAGCAGTCTCAAGCCTCCAGGGTGGG +
Preference number: 1 (lower is better)
Translates to: STALWEAERHTVGVH*WAAPVPAVSSLQGG
Trigger: CCCACCCTGGAGGCTTGAGACTGCTGGCACTGGAGCAGCCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 90 bp CCCTCCTCCAGCACCGAGCCCAGGGTGTTTGCTCAAGTTTCCTCGTaGGGGATCAGACAGCTTGGAACCGGGGCTGGAGAGGGAAGCCCT +
Preference number: 1 (lower is better)
Translates to: PSSSTEPRVFAQVSS*GIRQLGTGAGEGSP
Trigger: AGGGCTTCCCTCTCCAGCCCCGGTTCCAAGCTGTCTGATCCCCCACGAGGAAACTTGAGCAAACACCCTGGGCTCGGTGCTGGAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp ACAAGGTGCCACTGGCAGCTGGCCATTCTGAGGCCTCTTACTAGCTaGAGGAGGGGAGTGACTGACGCAGGCCCTGTGTCCACACCCCAC +
Preference number: 1 (lower is better)
Translates to: TRCHWQLAILRPLTS*RRGVTDAGPVSTPH
Trigger: GTGGGGTGTGGACACAGGGCCTGCGTCAGTCACTCCCCTCCTGCAGCTAGTAAGAGGCCTCAGAATGGCCAGCTGCCAGTGGCACCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 90 bp TTCCTGCAGTCTCCACAGCACTGTGGGAGGCTGAACGGCACACGGTaGGTGTCCATTGGTGGGCTGCTCCAGTGCCAGCAGTCTCAAGCC +
Preference number: 1 (lower is better)
Translates to: FLQSPQHCGRLNGTR*VSIGGLLQCQQSQA
Trigger: GGCTTGAGACTGCTGGCACTGGAGCAGCCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGACTGCAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 90 bp CCCCCAGGATCCCTGCCACCCACCCACCAGGTGCATCTCGAGCAATaGGCCTCGCCACCTGAATCTGCCACAATGCAAGGTCACCAGCAT +
Preference number: 1 (lower is better)
Translates to: PPGSLPPTHQVHLEQ*ASPPESATMQGHQH
Trigger: ATGCTGGTGACCTTGCATTGTGGCAGATTCAGGTGGCGAGGCCCATTGCTCGAGATGCACCTGGTGGGTGGGTGGCAGGGATCCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 90 bp GAGCCAGCAGGGGTTGGGGTGGAAGAGGGACACACAGCACGCGGATaGGCTGTGGCCTTAGTGTGGGAGGACCACAATCGTCCTGTCTTA +
Preference number: 1 (lower is better)
Translates to: EPAGVGVEEGHTARG*AVALVWEDHNRPVL
Trigger: TAAGACAGGACGATTGTGGTCCTCCCACACTAAGGCCACAGCCCATCCGCGTGCTGTGTGTCCCTCTTCCACCCCAACCCCTGCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 90 bp TCACATCCGAGGTGTCTCCCCCTCCTGCGGAGCCATAGCCAGAGATaGACTTCAAGGTCCTTTGAGTGGGTCTCCCAGCATGGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: SHPRCLPLLRSHSQR*TSRSFEWVSQHGPW
Trigger: CCAGGGCCCATGCTGGGAGACCCACTCAAAGGACCTTGAAGTTCATCTCTGGCTATGGCTCCGCAGGAGGGGGAGACACCTCGGATGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 90 bp GCCACCCACCCACCAGGTGCATCTCGAGCAATGGGCCTCGCCACCTaGATCTGCCACAATGCAAGGTCACCAGCATTCCTGCCAAGGATG +
Preference number: 1 (lower is better)
Translates to: ATHPPGASRAMGLAT*ICHNARSPAFLPRM
Trigger: CATCCTTGGCAGGAATGCTGGTGACCTTGCATTGTGGCAGATTCAGGTGGCGAGGCCCATTGCTCGAGATGCACCTGGTGGGTGGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp CACTCCACAGCTTCAGGTTGGGACCAGCACTTGGGACCCTTTCTCTaGCACTTGAGACTTGGCCCTGGCCCCACTTGGCATCTCCTCGTC +
Preference number: 1 (lower is better)
Translates to: HSTASGWDQHLGPFL*HLRLGPGPTWHLLV
Trigger: GACGAGGAGATGCCAAGTGGGGCCAGGGCCAAGTCTCAAGTGGCAGAGAAAGGGTCCCAAGTGCTGGTCCCAACCTGAAGCTGTGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp TGGACATGGCCAAGGCCACGCAGCAAAATGACGGGGCTAGGACCCTaGTGGGTCTGCAGATGGCAGTTCAGGGAGGACACCAAGGAACAC +
Preference number: 1 (lower is better)
Translates to: WTWPRPRSKMTGLGP*WVCRWQFREDTKEH
Trigger: GTGTTCCTTGGTGTCCTCCCTGAACTGCCATCTGCAGACCCAGCAGGGTCCTAGCCCCGTCATTTTGCTGCGTGGCCTTGGCCATGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 90 bp ACATGGCCAAGGCCACGCAGCAAAATGACGGGGCTAGGACCCTGCTaGGTCTGCAGATGGCAGTTCAGGGAGGACACCAAGGAACACCCT +
Preference number: 1 (lower is better)
Translates to: TWPRPRSKMTGLGPC*VCRWQFREDTKEHP
Trigger: AGGGTGTTCCTTGGTGTCCTCCCTGAACTGCCATCTGCAGACCCAGCAGGGTCCTAGCCCCGTCATTTTGCTGCGTGGCCTTGGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 90 bp AGGAACACCCTCATTGGCCCATTCTACCTGCTAGCTCTCCCTCCCTaGGCTGTTCTTGAAGATGCTACGCCCTCCTCCAGCACCGAGCCC +
Preference number: 1 (lower is better)
Translates to: RNTLIGPFYLLALPP*AVLEDATPSSSTEP
Trigger: GGGCTCGGTGCTGGAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAGGGAGAGCTAGCAGGTAGAATGGGCCAATGAGGGTGTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 90 bp CTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGCCCAAAGGGCCCTaGGTGCTGCCCTCCCAAGAGAGCCGACTTAGAATGACCTCCAGA +
Preference number: 1 (lower is better)
Translates to: LTARTLLSSRGPKGP*VLPSQESRLRMTSR
Trigger: TCTGGAGGTCATTCTAAGTCGGCTCTCTTGGGAGGGCAGCACTCAGGGCCCTTTGGGCCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 90 bp GGGAGACCAACAGGAGACAGGGGCCCTATGGAATCACAACCCAGGTaGGTGCCAGGTCTCTGCTGGCATTTGTGCCTTGGTGATGGTGCC +
Preference number: 1 (lower is better)
Translates to: GRPTGDRGPMESQPR*VPGLCWHLCLGDGA
Trigger: GGCACCATCACCAAGGCACAAATGCCAGCAGAGACCTGGCACTCACCTGGGTTGTGATTCCATAGGGCCCCTGTCTCCTGTTGGTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp GTGGAGGACCACGGGACCGCTAAACGGTCTGAGGGCATTTCAGACTaGCTTGAAGGGCAGTGGATGGGGAAGGTCAACGGGTTGGAGTGT +
Preference number: 1 (lower is better)
Translates to: VEDHGTAKRSEGISD*LEGQWMGKVNGLEC
Trigger: ACACTCCAACCCGTTGACCTTCCCCATCCACTGCCCTTCAAGGCAGTCTGAAATGCCCTCAGACCGTTTAGCGGTCCCGTGGTCCTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 90 bp CACAGAGTCCCAAAGGGCCCAACTAACTCCCAGACAAGGTGCCACTaGCAGCTGGCCATTCTGAGGCCTCTTACTAGCTGCAGGAGGGGA +
Preference number: 1 (lower is better)
Translates to: HRVPKGPTNSQTRCH*QLAILRPLTSCRRG
Trigger: TCCCCTCCTGCAGCTAGTAAGAGGCCTCAGAATGGCCAGCTGCCAGTGGCACCTTGTCTGGGAGTTAGTTGGGCCCTTTGGGACTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 90 bp TTTCAGACTGCCTTGAAGGGCAGTGGATGGGGAAGGTCAACGGGTTaGAGTGTGAGTAGGACCTGGCCCTTTGGGGTCTGGGCAGAGTGG +
Preference number: 1 (lower is better)
Translates to: FQTALKGSGWGRSTG*SVSRTWPFGVWAEW
Trigger: CCACTCTGCCCAGACCCCAAAGGGCCAGGTCCTACTCACACTCCAACCCGTTGACCTTCCCCATCCACTGCCCTTCAAGGCAGTCTGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp TCCCTTCACAGAGTCCCAAAGGGCCCAACTAACTCCCAGACAAGGTaGCACTGGCAGCTGGCCATTCTGAGGCCTCTTACTAGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: SLHRVPKGPTNSQTR*HWQLAILRPLTSCR
Trigger: CCTGCAGCTAGTAAGAGGCCTCAGAATGGCCAGCTGCCAGTGGCACCTTGTCTGGGAGTTAGTTGGGCCCTTTGGGACTCTGTGAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp AGGTGCATCTCGAGCAATGGGCCTCGCCACCTGAATCTGCCACAATaGAAGGTCACCAGCATTCCTGCCAAGGATGGGGAACAGGGTGAC +
Preference number: 1 (lower is better)
Translates to: RCISSNGPRHLNLPQ*KVTSIPAKDGEQGD
Trigger: GTCACCCTGTTCCCCATCCTTGGCAGGAATGCTGGTGACCTTGCATTGTGGCAGATTCAGGTGGCGAGGCCCATTGCTCGAGATGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp GACCAACAGGAGACAGGGGCCCTATGGAATCACAACCCAGGTGAGTaGCAGGTCTCTGCTGGCATTTGTGCCTTGGTGATGGTGCCAGCT +
Preference number: 1 (lower is better)
Translates to: DQQETGALWNHNPGE*QVSAGICALVMVPA
Trigger: AGCTGGCACCATCACCAAGGCACAAATGCCAGCAGAGACCTGGCACTCACCTGGGTTGTGATTCCATAGGGCCCCTGTCTCCTGTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 90 bp CCAAAGGGCCCTGAGTGCTGCCCTCCCAAGAGAGCCGACTTAGAATaGCCTCCAGAAGGCACTGTGACCTTGGTAGTGTCTTCCCTTCAC +
Preference number: 1 (lower is better)
Translates to: PKGPECCPPKRADLE*PPEGTVTLVVSSLH
Trigger: GTGAAGGGAAGACACTACCAAGGTCACAGTGCCTTCTGGAGGTCATTCTAAGTCGGCTCTCTTGGGAGGGCAGCACTCAGGGCCCTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp CAAGGGCGGTTGGATCCCTGCCACTTGGGTCTCAAGCAAATGTCCTaGGGCCATCAGAGAAATTCTTCCTGGACCAAGGGATGCCTGAGG +
Preference number: 1 (lower is better)
Translates to: QGRLDPCHLGLKQMS*GHQRNSSWTKGCLR
Trigger: CCTCAGGCATCCCTTGGTCCAGGAAGAATTTCTCTGATGGCCGCAGGACATTTGCTTGAGACCCAAGTGGCAGGGATCCAACCGCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 90 bp TGTGTGTCTCACATCTCCACTCAGGAGAGACGGCCCCTGGAAGCATaGTGTGGGGGAAACAAGCTGGGTCATTTCCTACAAGGTGGGCTG +
Preference number: 1 (lower is better)
Translates to: CVSHISTQERRPLEA*CGGNKLGHFLQGGL
Trigger: CAGCCCACCTTGTAGGAAATGACCCAGCTTGTTTCCCCCACATCATGCTTCCAGGGGCCGTCTCTCCTGAGTGGAGATGTGAGACACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 90 bp GGAAGCATGATGTGGGGGAAACAAGCTGGGTCATTTCCTACAAGGTaGGCTGTAACCAGATGGCTTCTCAGCCCCACCCAACTCTGCGCT +
Preference number: 1 (lower is better)
Translates to: GSMMWGKQAGSFPTR*AVTRWLLSPTQLCA
Trigger: AGCGCAGAGTTGGGTGGGGCTGAGAAGCCATCTGGTTACAGCCCACCTTGTAGGAAATGACCCAGCTTGTTTCCCCCACATCATGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 90 bp GTCTCACATCTCCACTCAGGAGAGACGGCCCCTGGAAGCATGATGTaGGGGAAACAAGCTGGGTCATTTCCTACAAGGTGGGCTGTAACC +
Preference number: 1 (lower is better)
Translates to: VSHLHSGETAPGSMM*GKQAGSFPTRWAVT
Trigger: GGTTACAGCCCACCTTGTAGGAAATGACCCAGCTTGTTTCCCCCACATCATGCTTCCAGGGGCCGTCTCTCCTGAGTGGAGATGTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp TGGAGACAGATGGTCAATCTGTCAAGACATCAAAGACCCCAGGGTTaGCACTTCAGCCTCATGCCATGCTCAGCACACGACAAGGGGCTG +
Preference number: 1 (lower is better)
Translates to: WRQMVNLSRHQRPQG*HFSLMPCSAHDKGL
Trigger: CAGCCCCTTGTCGTGTGCTGAGCATGGCATGAGGCTGAAGTGGCAACCCTGGGGTCTTTGATGTCTTGACAGATTGACCATCTGTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp TGGAAATTACAGCTGGGAAATCACATCCGAGGTGTCTCCCCCTCCTaGGGAGCCATAGCCAGAGATGAACTTCAAGGTCCTTTGAGTGGG +
Preference number: 1 (lower is better)
Translates to: WKLQLGNHIRGVSPS*GAIARDELQGPLSG
Trigger: CCCACTCAAAGGACCTTGAAGTTCATCTCTGGCTATGGCTCCGCAGGAGGGGGAGACACCTCGGATGTGATTTCCCAGCTGTAATTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp TCCCAACACAGAGCAACTGTTTCATTGTGTCTCTACAATCCCTCCTaGACATACTCACTCGATGATCCCAGCACCTGGTCACCCCTCCCT +
Preference number: 1 (lower is better)
Translates to: SQHRATVSLCLYNPS*TYSLDDPSTWSPLP
Trigger: AGGGAGGGGTGACCAGGTGCTGGGATCATCGAGTGAGTATGTGCAGGAGGGATTGTAGAGACACAATGAAACAGTTGCTCTGTGTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 90 bp TTGGGTCTCAAGCAAATGTCCTGCGGCCATCAGAGAAATTCTTCCTaGACCAAGGGATGCCTGAGGCCCTTTCCTTGGACAACTCTGACT +
Preference number: 1 (lower is better)
Translates to: LGLKQMSCGHQRNSS*TKGCLRPFPWTTLT
Trigger: AGTCAGAGTTGTCCAAGGAAAGGGCCTCAGGCATCCCTTGGTCCAGGAAGAATTTCTCTGATGGCCGCAGGACATTTGCTTGAGACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 90 bp CTCGGAATCTTTGGAAGTAACATTTCTGTCTCCCACTCCCAGCGATaGCACTGGATCACTTCCCAACACAGAGCAACTGTTTCATTGTGT +
Preference number: 1 (lower is better)
Translates to: LGIFGSNISVSHSQR*HWITSQHRATVSLC
Trigger: ACACAATGAAACAGTTGCTCTGTGTTGGGAAGTGATCCAGTGTCATCGCTGGGAGTGGGAGACAGAAATGTTACTTCCAAAGATTCCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 90 bp TCTAATAAATTACAGACCCAGGATGAGGACCCAGCTATATCTTCCTaGAACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAG +
Preference number: 1 (lower is better)
Translates to: SNKLQTQDEDPAISS*NTCVASLLAASAVQ
Trigger: CTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTTGCAGGAAGATATAGCTGGGTCCTCATCCTGGGTCTGTAATTTATTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp TCCCTCCCTGAGCTGTTCTTGAAGATGCTACGCCCTCCTCCAGCACCGAGCCCAGATCTGGGGCCACACTaGTCGGCCTGCCCACAGGCC +
Preference number: 2 (lower is better)
Translates to: SLPELFLKMLRPPPAPSPDLGPH*SACPQA
Trigger: GGCCTGTGGGCAGGCCGATCAGTGTGGCCCCAGATC...TGGGCTCGGTGCTGGAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp GACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGCCCACCCCACCCTGCTaGCTGGCTCCTAGGAAGCCC +
Preference number: 2 (lower is better)
Translates to: DTARQWGRGDVFLARGSWPTPPC*LAPRKP
Trigger: GGGCTTCCTAGGAGCCAGTCAGCAGGGTGGGGTGGG...CCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp TCTCCACAGCACTGTGGGAGGCTGAACGGCACACGGTGGGTGTCCATTGGTGGGCGGCCCCTGGAAGCATaGTGTGGGGGAAACAAGCTG +
Preference number: 2 (lower is better)
Translates to: SPQHCGRLNGTRWVSIGGRPLEA*CGGNKL
Trigger: CAGCTTGTTTCCCCCACATCATGCTTCCAGGGGCCG...CCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp CAAGAGAGCCGACTTAGAATGACCTCCAGAAGGCACTGTGACCTTGGTAGTGTCACCCGTGCCCGCTGCTaGGAGGGCGGCGCCATCCAG +
Preference number: 2 (lower is better)
Translates to: QESRLRMTSRRHCDLGSVTRARC*EGGAIQ
Trigger: CTGGATGGCGCCGCCCTCTCAGCAGCGGGCACGGGT...GACACTACCAAGGTCACAGTGCCTTCTGGAGGTCATTCTAAGTCGGCTCTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp TCCCTCCCTGAGCTGTTCTTGAAGATGCTACGCCCTCCTCCAGCACCGAGCCCATTCCTTGGACAACTCTaGCTCCAGTGCCCCGGGGCA +
Preference number: 2 (lower is better)
Translates to: SLPELFLKMLRPPPAPSPFLGQL*LQCPGA
Trigger: TGCCCCGGGGCACTGGAGTCAGAGTTGTCCAAGGAA...TGGGCTCGGTGCTGGAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp TCTCCACAGCACTGTGGGAGGCTGAACGGCACACGGTGGGTGTCCATTGGTGGGAGGAGAGACGGCCCCTaGAAGCATGATGTGGGGGAA +
Preference number: 2 (lower is better)
Translates to: SPQHCGRLNGTRWVSIGGRRDGP*KHDVGE
Trigger: TTCCCCCACATCATGCTTCCAGGGGCCGTCTCTCCT...CCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 90 bp ACAGCTTCAGGTTGGGACCAGCACTTGGGACCCTTTCTCTGCCACTaGAGACTTGGCCCTGGCCCCACTTGGCATCTCCTCGTCTCCACC +
Preference number: 2 (lower is better)
Translates to: TASGWDQHLGPFLCH*RLGPGPTWHLLVST
Trigger: GGTGGAGACGAGGAGATGCCAAGTGGGGCCAGGGCCAAGTCTCAAGTGGCAGAGAAAGGGTCCCAAGTGCTGGTCCCAACCTGAAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 90 bp TTCCTCAGGATGGCAAGAACCAAGGGCTTAGCTTCCTCCCATGACTaGATCTGGGGCCACACTGATCGGCCTGCCCACAGGCCTCGGGGA +
Preference number: 2 (lower is better)
Translates to: FLRMARTKGLASSHD*IWGHTDRPAHRPRG
Trigger: TCCCCGAGGCCTGTGGGCAGGCCGATCAGTGTGGCCCCAGATCAAGTCATGGGAGGAAGCTAAGCCCTTGGTTCTTGCCATCCTGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 90 bp AGCCCAGGGTGTTTGCTCAAGTTTCCTCGTGGGGGATCAGACAGCTaGGAACCGGGGCTGGAGAGGGAAGCCCTGAGCCCTCAGCAAACA +
Preference number: 2 (lower is better)
Translates to: SPGCLLKFPRGGSDS*EPGLEREALSPQQT
Trigger: TGTTTGCTGAGGGCTCAGGGCTTCCCTCTCCAGCCCCGGTTCCAAGCTGTCTGATCCCCCACGAGGAAACTTGAGCAAACACCCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 90 bp TCCCCCTCCTGCGGAGCCATAGCCAGAGATGAACTTCAAGGTCCTTaGAGTGGGTCTCCCAGCATGGGCCCTGGAGCAGCAGCATCAGCA +
Preference number: 2 (lower is better)
Translates to: SPSCGAIARDELQGP*SGSPSMGPGAAASA
Trigger: TGCTGATGCTGCTGCTCCAGGGCCCATGCTGGGAGACCCACTCAAAGGACCTTGAAGTTCATCTCTGGCTATGGCTCCGCAGGAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp ATCAGACAGCTTGGAACCGGGGCTGGAGAGGGAAGCCCTGAGCCCTCAGCAAACGGACCAAGGGATGCCTaGGGCCCTTTCCTTGGACAA +
Preference number: 2 (lower is better)
Translates to: IRQLGTGAGEGSPEPSANGPRDA*GPFLGQ
Trigger: TTGTCCAAGGAAAGGGCCTCAGGCATCCCTTGGTCC...GTTTGCTGAGGGCTCAGGGCTTCCCTCTCCAGCCCCGGTTCCAAGCTGTCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACTGCCACTTGAGACTTaGCCCTGGCCCCACTTGGCA +
Preference number: 2 (lower is better)
Translates to: LSQRKLDGPLALVRTKRALPLET*PWPHLA
Trigger: TGCCAAGTGGGGCCAGGGCCAAGTCTCAAGTGGCAG...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp TCCCTCCCTGAGCTGTTCTTGAAGATGCTACGCCCTCCTCCAGCACCGAGCCCATCCACAGCTTCAGGTTaGGACCAGCACTTGGGACCC +
Preference number: 2 (lower is better)
Translates to: SLPELFLKMLRPPPAPSPSTASG*DQHLGP
Trigger: GGGTCCCAAGTGCTGGTCCCAACCTGAAGCTGTGGA...TGGGCTCGGTGCTGGAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCGGCGCCCAGGGCCTCTaGCCCCATTGCTTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: QVSSEESPVSVCMARVGGGAQGL*PHCFLL
Trigger: GAGGAGGAAGCAATGGGGCCAGAGGCCCTGGGCGCC...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 90 bp TTCTTGAAGATGCTACGCCCTCCTCCAGCACCGAGCCCAGGGTGTTaGCTCAAGTTTCCTCGTGGGGGATCAGACAGCTTGGAACCGGGG +
Preference number: 2 (lower is better)
Translates to: FLKMLRPPPAPSPGC*LKFPRGGSDSLEPG
Trigger: CCCCGGTTCCAAGCTGTCTGATCCCCCACGAGGAAACTTGAGCAAACACCCTGGGCTCGGTGCTGGAGGAGGGCGTAGCATCTTCAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR GCA 90 bp ATCAGACAGCTTGGAACCGGGGCTGGAGAGGGAAGCCCTGAGCCCTCAGCAAACGCCACTTCAGCCTCATaGCATGCTCAGCACACGACA +
Preference number: 2 (lower is better)
Translates to: IRQLGTGAGEGSPEPSANATSAS*HAQHTT
Trigger: TGTCGTGTGCTGAGCATGGCATGAGGCTGAAGTGGC...GTTTGCTGAGGGCTCAGGGCTTCCCTCTCCAGCCCCGGTTCCAAGCTGTCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR GCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCGCAGGCAGAACTGTGTaGCAGGAAGGCCGGGCCCTC +
Preference number: 2 (lower is better)
Translates to: QVSSEESPVSVCMARVGGAGRTV*QEGRAL
Trigger: GAGGGCCCGGCCTTCCTGGCACACAGTTCTGCCTGC...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp GGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAGATGGTCTCCTGCATaGGCAGGCCTGTCCTTCCAG +
Preference number: 2 (lower is better)
Translates to: GWTPCPCEDQAGTEVSGKRWSPA*AGLSFQ
Trigger: CTGGAAGGACAGGCCTGCCCATGCAGGAGACCATCT...CTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 90 bp AGGACCACGGGACCGCTAAACGGTCTGAGGGCATTTCAGACTGCCTaGAAGGGCAGTGGATGGGGAAGGTCAACGGGTTGGAGTGTGAGT +
Preference number: 2 (lower is better)
Translates to: RTTGPLNGLRAFQTA*KGSGWGRSTGWSVS
Trigger: ACTCACACTCCAACCCGTTGACCTTCCCCATCCACTGCCCTTCAAGGCAGTCTGAAATGCCCTCAGACCGTTTAGCGGTCCCGTGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp GGGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGTCCCTGAGCTGTTCTTaGAGATGCTACGCCCTCCTC +
Preference number: 2 (lower is better)
Translates to: GVASPSYLTARTLLSSRGSLSCS*RCYALL
Trigger: GAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGA...CCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR GCA 90 bp TCCCTCCCTGAGCTGTTCTTGAAGATGCTACGCCCTCCTCCAGCACCGAGCCCATCTCCCCCTCCCTGTTaGTATCTTTCCTCAGGATGG +
Preference number: 2 (lower is better)
Translates to: SLPELFLKMLRPPPAPSPSPPPC*YLSSGW
Trigger: CCATCCTGAGGAAAGATAGCAACAGGGAGGGGGAGA...TGGGCTCGGTGCTGGAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp GGGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGGTTGGGACCAGCACTTaGGACCCTTTCTCTGCCACT +
Preference number: 2 (lower is better)
Translates to: GVASPSYLTARTLLSSRGVGTST*DPFSAT
Trigger: AGTGGCAGAGAAAGGGTCCCAAGTGCTGGTCCCAAC...CCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp GGGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGTGGAAAGGGGTGGCCTaGCTGGAGACAGATGGTCAA +
Preference number: 2 (lower is better)
Translates to: GVASPSYLTARTLLSSRGWKGVA*LETDGQ
Trigger: TTGACCATCTGTCTCCAGCCAGGCCACCCCTTTCCA...CCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 90 bp CCCCAGCCCCCGGTTCTCCTGGCAGTACCACAGGACTCGGAATCTTaGGAAGTAACATTTCTGTCTCCCACTCCCAGCGATGACACTGGA +
Preference number: 2 (lower is better)
Translates to: PQPPVLLAVPQDSES*EVTFLSPTPSDDTG
Trigger: TCCAGTGTCATCGCTGGGAGTGGGAGACAGAAATGTTACTTCCAAAGATTCCGAGTCCTGTGGTACTGCCAGGAGAACCGGGGGCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR GCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTATGAGGGGACCAGTTTaGGCGGAGCGCTGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: NTCVASLLAASAVQEDLAMRGPV*AERWWA
Trigger: TGCCCACCAGCGCTCCGCGCAAACTGGTCCCCTCAT...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCCTTGAGACTTGGCCCTaGCCCCACTTGGCATCTCCT +
Preference number: 2 (lower is better)
Translates to: GRVGTGFFRGISCECVHGLETWP*PHLASP
Trigger: AGGAGATGCCAAGTGGGGCCAGGGCCAAGTCTCAAG...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp GACAACTCTGACTCCAGTGCCCCGGGGCAAGCTTTATTTCCTGCTCCAAGAACACAGCAGGGGTTGGGGTaGAAGAGGGACACACAGCAC +
Preference number: 2 (lower is better)
Translates to: DNSDSSAPGQALFPAPRTQQGLG*KRDTQH
Trigger: GTGCTGTGTGTCCCTCTTCCACCCCAACCCCTGCTG...TGTTCTTGGAGCAGGAAATAAAGCTTGCCCCGGGGCACTGGAGTCAGAGTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp AGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGCCTTTCTCTGCCACTTaGGACTTGGCCCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: RVGTGFFRGISCECVHGKPFSAT*DLALAP
Trigger: TGGGGCCAGGGCCAAGTCTCAAGTGGCAGAGAAAGG...CTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp GACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGAGAGCCGACTTAGAATaGCCTCCAGAAGGCACTGTG +
Preference number: 2 (lower is better)
Translates to: DTARQWGRGDVFLARGSWRADLE*PPEGTV
Trigger: CACAGTGCCTTCTGGAGGTCATTCTAAGTCGGCTCT...CCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR GCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTTCTCCGGGACATGGATaGTCCCAGAGGAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: NTCVASLLAASAVQEDLASPGHG*SQRSQQ
Trigger: CTGCTGGCTCCTCTGGGAGCATCCATGTCCCGGAGA...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp TCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAAGTCCTAGCTGAGGAGCTTCCAGCCCTGGCCTaGCCTCTGTGGCCTGCCCCG +
Preference number: 2 (lower is better)
Translates to: SKELRFGRKSVSEVLAEELPALA*PLWPAP
Trigger: CGGGGCAGGCCACAGAGGCCAGGCCAGGGCTGGAAG...CTCCTCAGCTAGGACTTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 90 bp CTGGAGACAGATGGTCAATCTGTCAAGACATCAAAGACCCCAGGGTaGCCACTTCAGCCTCATGCCATGCTCAGCACACGACAAGGGGCT +
Preference number: 2 (lower is better)
Translates to: LETDGQSVKTSKTPG*PLQPHAMLSTRQGA
Trigger: AGCCCCTTGTCGTGTGCTGAGCATGGCATGAGGCTGAAGTGGCAACCCTGGGGTCTTTGATGTCTTGACAGATTGACCATCTGTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp ACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCTTAGCTTCCTCCCATaGCTTGATCTGGGGCCACAC +
Preference number: 2 (lower is better)
Translates to: TKRAQKYLARTVGTRGLFLSFLP*LDLGPH
Trigger: GTGTGGCCCCAGATCAAGTCATGGGAGGAAGCTAAG...GAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCTCCCATGACTTGATCTaGGGCCACACTGATCGGCCT +
Preference number: 2 (lower is better)
Translates to: QVSSEESPVSVCMARVGGSHDLI*GHTDRP
Trigger: AGGCCGATCAGTGTGGCCCCAGATCAAGTCATGGGA...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTAGTGTGAGTAGGACCTaGCCCTTTGGGGTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: NTCVASLLAASAVQEDLASVSRT*PFGVWA
Trigger: TGCCCAGACCCCAAAGGGCCAGGTCCTACTCACACT...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 90 bp AATCACAACCCAGGTGAGTGCCAGGTCTCTGCTGGCATTTGTGCCTaGGTGATGGTGCCAGCTGCCACTCCAAGACTTTGGCATAATTGG +
Preference number: 2 (lower is better)
Translates to: NHNPGECQVSAGICA*VMVPAATPRLWHNW
Trigger: CCAATTATGCCAAAGTCTTGGAGTGGCAGCTGGCACCATCACCAAGGCACAAATGCCAGCAGAGACCTGGCACTCACCTGGGTTGTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 90 bp GAGGACCCAGCTATATCTTCCTGCAACACCTGTGTTGCCAGTTTATaGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTTGTCCCTTGGGA +
Preference number: 2 (lower is better)
Translates to: EDPAISSCNTCVASL*AASAVQEDLACPLG
Trigger: TCCCAAGGGACAAGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTTGCAGGAAGATATAGCTGGGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp GACAACTCTGACTCCAGTGCCCCGGGGCAAGCTTTATTTCCTGCTCCAAGAACACCATCCATCCTAAGTTaGCAGGCTGTCCACACTGAT +
Preference number: 2 (lower is better)
Translates to: DNSDSSAPGQALFPAPRTPSILS*QAVHTD
Trigger: ATCAGTGTGGACAGCCTGTCAACTTAGGATGGATGG...TGTTCTTGGAGCAGGAAATAAAGCTTGCCCCGGGGCACTGGAGTCAGAGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp GTTCTCCTGGCAGTACCACAGGACTCGGAATCTTTGGAAGTAACATTTCTGTCTGTGGGTGTCCATTGGTaGGCTGCTCCAGTGCCAGCA +
Preference number: 2 (lower is better)
Translates to: VLLAVPQDSESLEVTFLSVGVHW*AAPVPA
Trigger: TGCTGGCACTGGAGCAGCCCACCAATGGACACCCAC...AGACAGAAATGTTACTTCCAAAGATTCCGAGTCCTGTGGTACTGCCAGGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTTTGAGAAAGGAATGCTaGGACCCAGACAGCGCCTTT +
Preference number: 2 (lower is better)
Translates to: NTCVASLLAASAVQEDLALRKEC*DPDSAF
Trigger: AAAGGCGCTGTCTGGGTCTCAGCATTCCTTTCTCAA...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCGCTGAATTAGAAATGTaGGTAGGACCCAGAAATCTG +
Preference number: 2 (lower is better)
Translates to: QVSSEESPVSVCMARVGGAELEM*VGPRNL
Trigger: CAGATTTCTGGGTCCTACCCACATTTCTAATTCAGC...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp ATATTCATTTGCTTTTGCCTTAAGCTTCATCGAGAAGGAGACTCGGGCATTGCTTGTGCATGGCAAGAGTaGGAGGCCAGCGCACTTCGT +
Preference number: 2 (lower is better)
Translates to: IFICFCLKLHREGDSGIACAWQE*EASALR
Trigger: ACGAAGTGCGCTGGCCTCCCACTCTTGCCATGCACA...AGCAATGCCCGAGTCTCCTTCTCGATGAAGCTTAAGGCAAAAGCAAATGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp ATATTCATTTGCTTTTGCCTTAAGCTTCATCGAGAAGGAGACTCGGGCATTGCTCTTCCTCCCATGACTTaGTCTGGGGCCACACTGATC +
Preference number: 2 (lower is better)
Translates to: IFICFCLKLHREGDSGIALPPMT*SGATLI
Trigger: GATCAGTGTGGCCCCAGATCAAGTCATGGGAGGAAG...AGCAATGCCCGAGTCTCCTTCTCGATGAAGCTTAAGGCAAAAGCAAATGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp TCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAAGTCCTAGCTGAGGAGCAGAAGAGGGAATTTTaGAAAGGGGTGGCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: SKELRFGRKSVSEVLAEEQKREF*KGVAWL
Trigger: CAGCCAGGCCACCCCTTTCCAAAATTCCCTCTTCTG...CTCCTCAGCTAGGACTTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR GCA 90 bp GTTCTCCTGGCAGTACCACAGGACTCGGAATCTTTGGAAGTAACATTTCTGTCTCTGAATCTGCCACAATaGAAGGTCACCAGCATTCCT +
Preference number: 2 (lower is better)
Translates to: VLLAVPQDSESLEVTFLSLNLPQ*KVTSIP
Trigger: AGGAATGCTGGTGACCTTGCATTGTGGCAGATTCAG...AGACAGAAATGTTACTTCCAAAGATTCCGAGTCCTGTGGTACTGCCAGGAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp GCAAGCTTTATTTCCTGCTCCAAGAACACGATTCTTCACACAAAAGTCAGCAATAAGGGGTGGCCTGGCTaGAGACAGATGGTCAATCTG +
Preference number: 2 (lower is better)
Translates to: ASFISCSKNTILHTKVSNKGWPG*RQMVNL
Trigger: CAGATTGACCATCTGTCTCCAGCCAGGCCACCCCTT...ATTGCTGACTTTTGTGTGAAGAATCGTGTTCTTGGAGCAGGAAATAAAGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CCA 90 bp GTTCTCCTGGCAGTACCACAGGACTCGGAATCTTTGGAAGTAACATTTCTGTCTTCATTTCCTACAAGGTaGGCTGTAACCAGATGGCTT +
Preference number: 2 (lower is better)
Translates to: VLLAVPQDSESLEVTFLSSFPTR*AVTRWL
Trigger: AAGCCATCTGGTTACAGCCCACCTTGTAGGAAATGA...AGACAGAAATGTTACTTCCAAAGATTCCGAGTCCTGTGGTACTGCCAGGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR TCA 90 bp ATATTCATTTGCTTTTGCCTTAAGCTTCATCGAGAAGGAGACTCGGGCATTGCTGGCATGTGGTCAGATTaGAAATCCAATACAATAGCC +
Preference number: 2 (lower is better)
Translates to: IFICFCLKLHREGDSGIAGMWSD*KSNTIA
Trigger: GGCTATTGTATTGGATTTTCAATCTGACCACATGCC...AGCAATGCCCGAGTCTCCTTCTCGATGAAGCTTAAGGCAAAAGCAAATGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 72 bp TCAGCCTCATGCCATGCTCAGCACACGACAAGGGGCTaGGGGCGCCCACTAGGCAGGGCTGGAGAGCTCCTC +
Preference number: 3 (lower is better)
Translates to: SASCHAQHTTRG*GRPLGRAGELL
Trigger: GAGGAGCTCTCCAGCCCTGCCTAGTGGGCGCCCTCAGCCCCTTGTCGTGTGCTGAGCATGGCATGAGGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp CAGGCCTCGGGGACCCAGCATCTCTCTGTGGCTCCGTaGCAAAGCCCTGTGAGGCTGCACAGAGAGCCCACT +
Preference number: 3 (lower is better)
Translates to: QASGTQHLSVAP*QSPVRLHREPT
Trigger: AGTGGGCTCTCTGTGCAGCCTCACAGGGCTTTGCCACGGAGCCACAGAGAGATGCTGGGTCCCCGAGGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 72 bp CCTCCTTCCTGCAGTCTCCACAGCACTGTGGGAGGCTaGACGGCACACGGTGGGTGTCCATTGGTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: PPSCSLHSTVGG*TAHGGCPLVGC
Trigger: GCAGCCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGACTGCAGGAAGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 72 bp ACACTCCCCCAGGATCCCTGCCACCCACCCACCAGGTaGATCTCGAGCAATGGGCCTCGCCACCTGAATCTG +
Preference number: 3 (lower is better)
Translates to: TLPQDPCHPPTR*ISSNGPRHLNL
Trigger: CAGATTCAGGTGGCGAGGCCCATTGCTCGAGATGCACCTGGTGGGTGGGTGGCAGGGATCCTGGGGGAGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp TGGGAGGCTGAACGGCACACGGTGGGTGTCCATTGGTaGGCTGCTCCAGTGCCAGCAGTCTCAAGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: WEAERHTVGVHW*AAPVPAVSSLQ
Trigger: CTGGAGGCTTGAGACTGCTGGCACTGGAGCAGCCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp CTGTGGGAGGCTGAACGGCACACGGTGGGTGTCCATTaGTGGGCTGCTCCAGTGCCAGCAGTCTCAAGCCTC +
Preference number: 3 (lower is better)
Translates to: LWEAERHTVGVH*WAAPVPAVSSL
Trigger: GAGGCTTGAGACTGCTGGCACTGGAGCAGCCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp TCTCCACAGCACTGTGGGAGGCTGAACGGCACACGGTaGGTGTCCATTGGTGGGCTGCTCCAGTGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: SPQHCGRLNGTR*VSIGGLLQCQQ
Trigger: CTGCTGGCACTGGAGCAGCCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CAA 90 bp GGGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGTGGCCCTGGCCCCACTaGGCATCTCCTCGTCTCCAC +
Preference number: 3 (lower is better)
Translates to: GVASPSYLTARTLLSSRGWPWPH*ASPRLH
Trigger: GTGGAGACGAGGAGATGCCAAGTGGGGCCAGGGCCA...CCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 72 bp CCAAGGCCACGCAGCAAAATGACGGGGCTAGGACCCTaGTGGGTCTGCAGATGGCAGTTCAGGGAGGACACC +
Preference number: 3 (lower is better)
Translates to: PRPRSKMTGLGP*WVCRWQFREDT
Trigger: GGTGTCCTCCCTGAACTGCCATCTGCAGACCCAGCAGGGTCCTAGCCCCGTCATTTTGCTGCGTGGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 72 bp AACCAGATGGCTTCTCAGCCCCACCCAACTCTGCGCTaGAGTATGAGGGGACCAGTTTGCGCGGAGCGCTGG +
Preference number: 3 (lower is better)
Translates to: NQMASQPHPTLR*SMRGPVCAERW
Trigger: CCAGCGCTCCGCGCAAACTGGTCCCCTCATACTGCAGCGCAGAGTTGGGTGGGGCTGAGAAGCCATCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CAA 90 bp GACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGCACGGTGGGTGTCCATaGGTGGGCTGCTCCAGTGCC +
Preference number: 3 (lower is better)
Translates to: DTARQWGRGDVFLARGSWHGGCP*VGCSSA
Trigger: GGCACTGGAGCAGCCCACCAATGGACACCCACCGTG...CCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 72 bp TGCTACGCCCTCCTCCAGCACCGAGCCCAGGGTGTTTaGTCAAGTTTCCTCGTGGGGGATCAGACAGCTTGG +
Preference number: 3 (lower is better)
Translates to: CYALLQHRAQGV*SSFLVGDQTAW
Trigger: CCAAGCTGTCTGATCCCCCACGAGGAAACTTGAGCAAACACCCTGGGCTCGGTGCTGGAGGAGGGCGTAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp GCCTTGAAGGGCAGTGGATGGGGAAGGTCAACGGGTTaGAGTGTGAGTAGGACCTGGCCCTTTGGGGTCTGG +
Preference number: 3 (lower is better)
Translates to: ALKGSGWGRSTG*SVSRTWPFGVW
Trigger: CCAGACCCCAAAGGGCCAGGTCCTACTCACACTCCAACCCGTTGACCTTCCCCATCCACTGCCCTTCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp TCCCTGCCACCCACCCACCAGGTGCATCTCGAGCAATaGGCCTCGCCACCTGAATCTGCCACAATGCAAGGT +
Preference number: 3 (lower is better)
Translates to: SLPPTHQVHLEQ*ASPPESATMQG
Trigger: ACCTTGCATTGTGGCAGATTCAGGTGGCGAGGCCCATTGCTCGAGATGCACCTGGTGGGTGGGTGGCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 72 bp AGGACTCTCCTCTCCTCAAGAGGGCCCAAAGGGCCCTaGGTGCTGCCCTCCCAAGAGAGCCGACTTAGAATG +
Preference number: 3 (lower is better)
Translates to: RTLLSSRGPKGP*VLPSQESRLRM
Trigger: CATTCTAAGTCGGCTCTCTTGGGAGGGCAGCACTCAGGGCCCTTTGGGCCCTCTTGAGGAGAGGAGAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 72 bp CACGGGACCGCTAAACGGTCTGAGGGCATTTCAGACTaGCTTGAAGGGCAGTGGATGGGGAAGGTCAACGGG +
Preference number: 3 (lower is better)
Translates to: HGTAKRSEGISD*LEGQWMGKVNG
Trigger: CCCGTTGACCTTCCCCATCCACTGCCCTTCAAGGCAGTCTGAAATGCCCTCAGACCGTTTAGCGGTCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp TCAAGGTCCTTTGAGTGGGTCTCCCAGCATGGGCCCTaGAGCAGCAGCATCAGCATAGACCTGGGCACTCGT +
Preference number: 3 (lower is better)
Translates to: SRSFEWVSQHGP*SSSISIDLGTR
Trigger: ACGAGTGCCCAGGTCTATGCTGATGCTGCTGCTCCAGGGCCCATGCTGGGAGACCCACTCAAAGGACCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp CTAGCTTGTCCCTTGGGACCACCTGACCAGGTGGCCTaGGATGAGGAACTGGGAGGCCTTGAACTAGGCATC +
Preference number: 3 (lower is better)
Translates to: LACPLGPPDQVA*DEELGGLELGI
Trigger: GATGCCTAGTTCAAGGCCTCCCAGTTCCTCATCCCAGGCCACCTGGTCAGGTGGTCCCAAGGGACAAGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CAA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCCCCTTTCTCTGCCACTaGAGACTTGGCCCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: GRVGTGFFRGISCECVHGPFLCH*RLGPGP
Trigger: GGGGCCAGGGCCAAGTCTCAAGTGGCAGAGAAAGGG...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CAA 90 bp TCTCCACAGCACTGTGGGAGGCTGAACGGCACACGGTGGGTGTCCATTGGTGGGGAAGGCACTGTGACCTaGGTAGTGTCTTCCCTTCAC +
Preference number: 3 (lower is better)
Translates to: SPQHCGRLNGTRWVSIGGEGTVT*VVSSLH
Trigger: GTGAAGGGAAGACACTACCAAGGTCACAGTGCCTTC...CCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 72 bp TCACCATGGGGACACTGCTCGCCAATGGGGCAGAGGTaGCGTCTTCTTAGCCAGAGGAAGTTGGATGGACCC +
Preference number: 3 (lower is better)
Translates to: SPWGHCSPMGQR*RLLSQRKLDGP
Trigger: GGGTCCATCCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
3UTR TCA 72 bp GGTCACCAGCATTCCTGCCAAGGATGGGGAACAGGGTaGCTCAGTTCCCGCTTGCTCATCCCAGGAAAGGGA +
Preference number: 3 (lower is better)
Translates to: GHQHSCQGWGTG*LSSRLLIPGKG
Trigger: TCCCTTTCCTGGGATGAGCAAGCGGGAACTGAGTCACCCTGTTCCCCATCCTTGGCAGGAATGCTGGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 72 bp CCACCAGGTGCATCTCGAGCAATGGGCCTCGCCACCTaGATCTGCCACAATGCAAGGTCACCAGCATTCCTG +
Preference number: 3 (lower is better)
Translates to: PPGASRAMGLAT*ICHNARSPAFL
Trigger: CAGGAATGCTGGTGACCTTGCATTGTGGCAGATTCAGGTGGCGAGGCCCATTGCTCGAGATGCACCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 72 bp CTCAGCAAACATCAGCGCCAAGGGCGGTTGGATCCCTaGCACTTGGGTCTCAAGCAAATGTCCTGCGGCCAT +
Preference number: 3 (lower is better)
Translates to: LSKHQRQGRLDP*HLGLKQMSCGH
Trigger: ATGGCCGCAGGACATTTGCTTGAGACCCAAGTGGCAGGGATCCAACCGCCCTTGGCGCTGATGTTTGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp CCAAAGGGCCCAACTAACTCCCAGACAAGGTGCCACTaGCAGCTGGCCATTCTGAGGCCTCTTACTAGCTGC +
Preference number: 3 (lower is better)
Translates to: PKGPTNSQTRCH*QLAILRPLTSC
Trigger: GCAGCTAGTAAGAGGCCTCAGAATGGCCAGCTGCCAGTGGCACCTTGTCTGGGAGTTAGTTGGGCCCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp TTGAGCCTGGGAGACCAACAGGAGACAGGGGCCCTATaGAATCACAACCCAGGTGAGTGCCAGGTCTCTGCT +
Preference number: 3 (lower is better)
Translates to: LSLGDQQETGAL*NHNPGECQVSA
Trigger: AGCAGAGACCTGGCACTCACCTGGGTTGTGATTCCATAGGGCCCCTGTCTCCTGTTGGTCTCCCAGGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CAA 90 bp GACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGCTCCCTGAGCTGTTCTaGAAGATGCTACGCCCTCCT +
Preference number: 3 (lower is better)
Translates to: DTARQWGRGDVFLARGSWLPELF*KMLRPP
Trigger: AGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAG...CCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 72 bp CTCATTGGCCCATTCTACCTGCTAGCTCTCCCTCCCTaGGCTGTTCTTGAAGATGCTACGCCCTCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: LIGPFYLLALPP*AVLEDATPSSS
Trigger: GCTGGAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAGGGAGAGCTAGCAGGTAGAATGGGCCAATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 72 bp CAGCTGGGAAATCACATCCGAGGTGTCTCCCCCTCCTaGGGAGCCATAGCCAGAGATGAACTTCAAGGTCCT +
Preference number: 3 (lower is better)
Translates to: QLGNHIRGVSPS*GAIARDELQGP
Trigger: AGGACCTTGAAGTTCATCTCTGGCTATGGCTCCGCAGGAGGGGGAGACACCTCGGATGTGATTTCCCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 72 bp TCGAGCAATGGGCCTCGCCACCTGAATCTGCCACAATaGAAGGTCACCAGCATTCCTGCCAAGGATGGGGAA +
Preference number: 3 (lower is better)
Translates to: SSNGPRHLNLPQ*KVTSIPAKDGE
Trigger: TTCCCCATCCTTGGCAGGAATGCTGGTGACCTTGCATTGTGGCAGATTCAGGTGGCGAGGCCCATTGCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp CTCCACTCAGGAGAGACGGCCCCTGGAAGCATGATGTaGGGGAAACAAGCTGGGTCATTTCCTACAAGGTGG +
Preference number: 3 (lower is better)
Translates to: LHSGETAPGSMM*GKQAGSFPTRW
Trigger: CCACCTTGTAGGAAATGACCCAGCTTGTTTCCCCCACATCATGCTTCCAGGGGCCGTCTCTCCTGAGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 72 bp GCTCCTAGGAAGCCCTCTCAGCCATCCATCCTAAGTTaGCAGGCTGTCCACACTGATGAAATCTCCCCCTCC +
Preference number: 3 (lower is better)
Translates to: APRKPSQPSILS*QAVHTDEISPS
Trigger: GGAGGGGGAGATTTCATCAGTGTGGACAGCCTGTCAACTTAGGATGGATGGCTGAGAGGGCTTCCTAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 72 bp GGACCCAGAAATCTGTGTGTTAACAAACCCTCTGGGTaGTCCGCGTTTGAGAACCCCTGGTCTGGGCAAGCC +
Preference number: 3 (lower is better)
Translates to: GPRNLCVNKPSG*SAFENPWSGQA
Trigger: GGCTTGCCCAGACCAGGGGTTCTCAAACGCGGATCACCCAGAGGGTTTGTTAACACACAGATTTCTGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 72 bp CACATCTCCACTCAGGAGAGACGGCCCCTGGAAGCATaGTGTGGGGGAAACAAGCTGGGTCATTTCCTACAA +
Preference number: 3 (lower is better)
Translates to: HISTQERRPLEA*CGGNKLGHFLQ
Trigger: TTGTAGGAAATGACCCAGCTTGTTTCCCCCACATCATGCTTCCAGGGGCCGTCTCTCCTGAGTGGAGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR TCA 72 bp TTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTaGGGACCAAGCGGGCACAGAAGTATCTGGCAAGAA +
Preference number: 3 (lower is better)
Translates to: LARGSWMDPLPL*GPSGHRSIWQE
Trigger: TTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
3UTR CCA 72 bp ATGTGGGGGAAACAAGCTGGGTCATTTCCTACAAGGTaGGCTGTAACCAGATGGCTTCTCAGCCCCACCCAA +
Preference number: 3 (lower is better)
Translates to: MWGKQAGSFPTR*AVTRWLLSPTQ
Trigger: TTGGGTGGGGCTGAGAAGCCATCTGGTTACAGCCCACCTTGTAGGAAATGACCCAGCTTGTTTCCCCCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CAA 90 bp ACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCTTGGATCCCTGCCACTaGGGTCTCAAGCAAATGTCC +
Preference number: 3 (lower is better)
Translates to: TKRAQKYLARTVGTRGLFLDPCH*GLKQMS
Trigger: GGACATTTGCTTGAGACCCAAGTGGCAGGGATCCAA...GAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 72 bp ATGGTCAATCTGTCAAGACATCAAAGACCCCAGGGTTaGCACTTCAGCCTCATGCCATGCTCAGCACACGAC +
Preference number: 3 (lower is better)
Translates to: MVNLSRHQRPQG*HFSLMPCSAHD
Trigger: GTCGTGTGCTGAGCATGGCATGAGGCTGAAGTGGCAACCCTGGGGTCTTTGATGTCTTGACAGATTGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp AAGCAAATGTCCTGCGGCCATCAGAGAAATTCTTCCTaGACCAAGGGATGCCTGAGGCCCTTTCCTTGGACA +
Preference number: 3 (lower is better)
Translates to: KQMSCGHQRNSS*TKGCLRPFPWT
Trigger: TGTCCAAGGAAAGGGCCTCAGGCATCCCTTGGTCCAGGAAGAATTTCTCTGATGGCCGCAGGACATTTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp GATTCTCTGAAAGGCCCCTTCCCCAGGAGAAGCAGATaGAAATTACAGCTGGGAAATCACATCCGAGGTGTC +
Preference number: 3 (lower is better)
Translates to: DSLKGPFPRRSR*KLQLGNHIRGV
Trigger: GACACCTCGGATGTGATTTCCCAGCTGTAATTTCCATCTGCTTCTCCTGGGGAAGGGGCCTTTCAGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 72 bp TTACAGACCCAGGATGAGGACCCAGCTATATCTTCCTaGAACACCTGTGTTGCCAGTTTATTGGCAGCCTCT +
Preference number: 3 (lower is better)
Translates to: LQTQDEDPAISS*NTCVASLLAAS
Trigger: AGAGGCTGCCAATAAACTGGCAACACAGGTGTTGCAGGAAGATATAGCTGGGTCCTCATCCTGGGTCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp GGCAGAAGAGGGAATTTTGGAAAGGGGTGGCCTGGCTaGAGACAGATGGTCAATCTGTCAAGACATCAAAGA +
Preference number: 3 (lower is better)
Translates to: GRRGNFGKGWPG*RQMVNLSRHQR
Trigger: TCTTTGATGTCTTGACAGATTGACCATCTGTCTCCAGCCAGGCCACCCCTTTCCAAAATTCCCTCTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CCA 72 bp TACTGGCAGAAGAGGGAATTTTGGAAAGGGGTGGCCTaGCTGGAGACAGATGGTCAATCTGTCAAGACATCA +
Preference number: 3 (lower is better)
Translates to: YWQKREFWKGVA*LETDGQSVKTS
Trigger: TGATGTCTTGACAGATTGACCATCTGTCTCCAGCCAGGCCACCCCTTTCCAAAATTCCCTCTTCTGCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CAA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTAGAGCAACTGTTTCATaGTGTCTCTACAATCCCTCC +
Preference number: 3 (lower is better)
Translates to: NTCVASLLAASAVQEDLARATVS*CLYNPS
Trigger: GGAGGGATTGTAGAGACACAATGAAACAGTTGCTCT...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR GCA 72 bp AGAGCAACTGTTTCATTGTGTCTCTACAATCCCTCCTaGACATACTCACTCGATGATCCCAGCACCTGGTCA +
Preference number: 3 (lower is better)
Translates to: RATVSLCLYNPS*TYSLDDPSTWS
Trigger: TGACCAGGTGCTGGGATCATCGAGTGAGTATGTGCAGGAGGGATTGTAGAGACACAATGAAACAGTTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR-3UTR CAA 90 bp GCAAGCTTTATTTCCTGCTCCAAGAACACGATTCTTCACACAAAAGTCAGCAATGCAGAAGAGGGAATTTaGGAAAGGGGTGGCCTGGCT +
Preference number: 3 (lower is better)
Translates to: ASFISCSKNTILHTKVSNAEEGI*ERGGLA
Trigger: AGCCAGGCCACCCCTTTCCAAAATTCCCTCTTCTGC...ATTGCTGACTTTTGTGTGAAGAATCGTGTTCTTGGAGCAGGAAATAAAGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAACCCGGGGCCGGGGCTaGCCCTCGTGGTCATCACGC +
Preference number: 4 (lower is better)
Translates to: PEEVGWTPCPCEDQAGTETRGRG*PSWSSR
Trigger: GCGTGATGACCACGAGGGCCAGCCCCGGCCCCGGGT...TTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp ATCAGACAGCTTGGAACCGGGGCTGGAGAGGGAAGCCCTGAGCCCTCAGCAAACGGGGCGGGACTTAGGTaGGATGTGGCCCCGCTTCCG +
Preference number: 4 (lower is better)
Translates to: IRQLGTGAGEGSPEPSANGAGLR*DVAPLP
Trigger: CGGAAGCGGGGCCACATCTCACCTAAGTCCCGCCCC...GTTTGCTGAGGGCTCAGGGCTTCCCTCTCCAGCCCCGGTTCCAAGCTGTCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp ATCAGACAGCTTGGAACCGGGGCTGGAGAGGGAAGCCCTGAGCCCTCAGCAAACGGCGCCCAGGGCCTCTaGCCCCATTGCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: IRQLGTGAGEGSPEPSANGAQGL*PHCFLL
Trigger: GAGGAGGAAGCAATGGGGCCAGAGGCCCTGGGCGCC...GTTTGCTGAGGGCTCAGGGCTTCCCTCTCCAGCCCCGGTTCCAAGCTGTCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GGGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGCACACGACAAGGGGCTaGGGGCGCCCACTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GVASPSYLTARTLLSSRGHTTRG*GRPLGR
Trigger: CCTGCCTAGTGGGCGCCCTCAGCCCCTTGTCGTGTG...CCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp CAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGGGGCCCAAAGGGCCCTaGGTGCTGCCCTCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: QRKLDGPLALVRTKRAQKGPKGP*VLPSQE
Trigger: CTCTTGGGAGGGCAGCACTCAGGGCCCTTTGGGCCC...CTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGCGCCCCCAGTGCCTGCTaGGAGTTCAGCCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GWQAHLTLLPGLSSPQEGAPSAC*EFSQGR
Trigger: CCTCCCCTGGCTGAACTCTCAGCAGGCACTGGGGGC...GCCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTGGCCTGGCCTCTGTaGCCTGCCCCGGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: VRTKRAQKYLARTVGTRGLAWPL*PAPGHP
Trigger: TGGGTGACCCGGGGCAGGCCACAGAGGCCAGGCCAG...CCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp ATCAGACAGCTTGGAACCGGGGCTGGAGAGGGAAGCCCTGAGCCCTCAGCAAACACGCTCAGGGTCCTCTaGGCCGGGAGGACCATCATC +
Preference number: 4 (lower is better)
Translates to: IRQLGTGAGEGSPEPSANTLRVL*AGRTII
Trigger: GATGATGGTCCTCCCGGCTCAGAGGACCCTGAGCGT...GTTTGCTGAGGGCTCAGGGCTTCCCTCTCCAGCCCCGGTTCCAAGCTGTCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGGTGGCTGAGCTCTaGGCGTGGTCTCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LSQRKLDGPLALVRTKRAQVAEL*AWSREQ
Trigger: CTGCTCCCGAGACCACGCTCAGAGCTCAGCCACCTG...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCAGCAGCTCCAGGTGGCTaGGCTCTGAGCGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: LSQRKLDGPLALVRTKRAAAPGG*ALSVVS
Trigger: CGAGACCACGCTCAGAGCTCAGCCACCTGGAGCTGC...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp GGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGCCAGGAGGGGAGTGACTaGCGCAGGCCCTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GWQAHLTLLPGLSSPQEGQEGSD*RRPCVH
Trigger: GTGGACACAGGGCCTGCGTCAGTCACTCCCCTCCTG...GCCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp TCCCTCCCTGAGCTGTTCTTGAAGATGCTACGCCCTCCTCCAGCACCGAGCCCACTCTGCGCTGCAGTATaGGGGGACCAGTTTGCGCGG +
Preference number: 4 (lower is better)
Translates to: SLPELFLKMLRPPPAPSPLCAAV*GDQFAR
Trigger: CCGCGCAAACTGGTCCCCTCATACTGCAGCGCAGAG...TGGGCTCGGTGCTGGAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp TCTCCACAGCACTGTGGGAGGCTGAACGGCACACGGTGGGTGTCCATTGGTGGGGGTGGAAAGGAGGGATaGGGCGGCAGTGTGCATGAG +
Preference number: 4 (lower is better)
Translates to: SPQHCGRLNGTRWVSIGGGGKEG*GGSVHE
Trigger: CTCATGCACACTGCCGCCTCATCCCTCCTTTCCACC...CCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp CCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAATCGAGGTCCCAGATGTaGGCCCCGAGCGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PEEVGWTPCPCEDQAGTESRSQM*APSASK
Trigger: CTTCGAGGCGCTCGGGGCGCACATCTGGGACCTCGA...TTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGGCAGGGGCGAAAGGTaGGGGGTGGCAAGCCCATCT +
Preference number: 4 (lower is better)
Translates to: PEEVGWTPCPCEDQAGTEGRGER*GVASPS
Trigger: AGATGGGCTTGCCACCCCCCACCTTTCGCCCCTGCC...TTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCTGCGCGGAGCGCTGGTaGGCAGGGGCGAAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGCAERW*AGAKGG
Trigger: CCCACCTTTCGCCCCTGCCCACCAGCGCTCCGCGCA...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CCTCTGGGTGATCCGCGTTTGAGAACCCCTGGTCTGGGCAAGCCCTTCATGTCACTCAAGCCTCCAGGGTaGGGAGCGGAGGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PLGDPRLRTPGLGKPFMSLKPPG*GAEGGL
Trigger: CAGACCACCCTCCGCTCCCCACCCTGGAGGCTTGAG...TGACATGAAGGGCTTGCCCAGACCAGGGGTTCTCAAACGCGGATCACCCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GGGCATCACCATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTACTCAAGCCTCCAGGGTaGGGAGCGGAGGGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: GHHHGDTARQWGRGDVFLLKPPG*GAEGGL
Trigger: CAGACCACCCTCCGCTCCCCACCCTGGAGGCTTGAG...TAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGATGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp TTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAGGCGCCCAGGGCCTCTaGCCCCATTGCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LDGPLALVRTKRAQKYLAGAQGL*PHCFLL
Trigger: GAGGAGGAAGCAATGGGGCCAGAGGCCCTGGGCGCC...TGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp TCTCCACAGCACTGTGGGAGGCTGAACGGCACACGGTGGGTGTCCATTGGTGGGGCTGTCGCCAGCATCTaGCTCTCCACAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SPQHCGRLNGTRWVSIGGAVASI*LSTGGE
Trigger: CTCTCCTCCTGTGGAGAGCCAGATGCTGGCGACAGC...CCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCCCCACCCCACCCTGCTaGCTGGCTCCTAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGPTPPC*LAPRKP
Trigger: GGGCTTCCTAGGAGCCAGTCAGCAGGGTGGGGTGGG...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GGGCATCACCATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAAGCACTGTGGGAGGCTaGACGGCACACGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GHHHGDTARQWGRGDVFLSTVGG*TAHGGC
Trigger: ACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCT...TAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGCCTCCTTCCCCTTCCTaGTCCTTCAGGCGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: LLSQRKLDGPLALVRTKRPPSPS*SFRRAV
Trigger: GACGGCGCGCCTGAAGGAGCAGGAAGGGGAAGGAGG...CCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAATGAGGGGACCAGTTTaGGCGGAGCGCTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PEEVGWTPCPCEDQAGTEMRGPV*AERWWA
Trigger: TGCCCACCAGCGCTCCGCGCAAACTGGTCCCCTCAT...TTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp TCTCCACAGCACTGTGGGAGGCTGAACGGCACACGGTGGGTGTCCATTGGTGGGGTTGGATGGACCCCTTaGCCTTGTGAGGACCAAGCG +
Preference number: 4 (lower is better)
Translates to: SPQHCGRLNGTRWVSIGGVGWTP*PCEDQA
Trigger: CGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAAC...CCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp ATCAGACAGCTTGGAACCGGGGCTGGAGAGGGAAGCCCTGAGCCCTCAGCAAACACCCCATCTTGCCTCTaGCTGGCGGGGCTAATGGTG +
Preference number: 4 (lower is better)
Translates to: IRQLGTGAGEGSPEPSANTPSCL*LAGLMV
Trigger: CACCATTAGCCCCGCCAGGCAGAGGCAAGATGGGGT...GTTTGCTGAGGGCTCAGGGCTTCCCTCTCCAGCCCCGGTTCCAAGCTGTCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCAAGCCCCCGGTTCTCCTaGCAGTACCACAGGACTCGG +
Preference number: 4 (lower is better)
Translates to: LSQRKLDGPLALVRTKRASPRFS*QYHRTR
Trigger: CCGAGTCCTGTGGTACTGCCAGGAGAACCGGGGGCT...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 72 bp GGTTGGGACCAGCACTTGGGACCCTTTCTCTGCCACTaGAGACTTGGCCCTGGCCCCACTTGGCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: GWDQHLGPFLCH*RLGPGPTWHLL
Trigger: GAGGAGATGCCAAGTGGGGCCAGGGCCAAGTCTCAAGTGGCAGAGAAAGGGTCCCAAGTGCTGGTCCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCGCAGCTCCAGGTGGCTaGGCTCTGAGCGTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGAAPGG*ALSVVS
Trigger: CGAGACCACGCTCAGAGCTCAGCCACCTGGAGCTGC...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCGCCCCCAGTGCCTGCTaGGAGTTCAGCCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGAPSAC*EFSQGR
Trigger: CCTCCCCTGGCTGAACTCTCAGCAGGCACTGGGGGC...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp TCTCCACAGCACTGTGGGAGGCTGAACGGCACACGGTGGGTGTCCATTGGTGGGCAAAGACCCCAGGGTTaGCACTTCAGCCTCATGCCA +
Preference number: 4 (lower is better)
Translates to: SPQHCGRLNGTRWVSIGGQRPQG*HFSLMP
Trigger: TGGCATGAGGCTGAAGTGGCAACCCTGGGGTCTTTG...CCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGCTCTCCGGGACATGGATaGTCCCAGAGGAGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GWQAHLTLLPGLSSPQEGSPGHG*SQRSQQ
Trigger: CTGCTGGCTCCTCTGGGAGCATCCATGTCCCGGAGA...GCCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GGGCATCACCATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGGCCTCTGGCCCCATTaGTTCCTCCTCCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GHHHGDTARQWGRGDVFLGLWPH*FLLLPA
Trigger: TGCAGGAAGGAGGAGGAAGCAATGGGGCCAGAGGCC...TAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGCACCCACCCACCAGGTaGATCTCGAGCAATGGGCCT +
Preference number: 4 (lower is better)
Translates to: QRKLDGPLALVRTKRAQKHPPTR*ISSNGP
Trigger: AGGCCCATTGCTCGAGATGCACCTGGTGGGTGGGTG...CTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp ACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCGGGGCTGGCCCTCGTaGTCATCACGCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TKRAQKYLARTVGTRGLFRGWPS*SSRSGS
Trigger: GGACCCTGAGCGTGATGACCACGAGGGCCAGCCCCG...GAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp CTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGTGTGGTTCGGGCGGTTaGGGGGCTGCCCAAGAATGC +
Preference number: 4 (lower is better)
Translates to: LLSQRKLDGPLALVRTKRCGSGG*GAAQEC
Trigger: GCATTCTTGGGCAGCCCCCCAACCGCCCGAACCACA...CCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp CTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGGGAGCAGCTCCAGGTaGCTGAGCTCTGAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LLSQRKLDGPLALVRTKRGSSSR*LSSERG
Trigger: ACCACGCTCAGAGCTCAGCCACCTGGAGCTGCTCCC...CCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTCTTCCAGCCCTGGCCTaGCCTCTGTGGCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: VGTGFFRGISCECVHGKSLPALA*PLWPAP
Trigger: CGGGGCAGGCCACAGAGGCCAGGCCAGGGCTGGAAG...ACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CCTCTGGGTGATCCGCGTTTGAGAACCCCTGGTCTGGGCAAGCCCTTCATGTCACACACAGCACGCGGATaGGCTGTGGCCTTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PLGDPRLRTPGLGKPFMSHTARG*AVALVW
Trigger: CCACACTAAGGCCACAGCCCATCCGCGTGCTGTGTG...TGACATGAAGGGCTTGCCCAGACCAGGGGTTCTCAAACGCGGATCACCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAGTGGGTGTCCATTGGTaGGCTGCTCCAGTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: HGDTARQWGRGDVFLARGVGVHW*AAPVPA
Trigger: TGCTGGCACTGGAGCAGCCCACCAATGGACACCCAC...TCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GGGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGACGGTGGGTGTCCATTaGTGGGCTGCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: GVASPSYLTARTLLSSRGTVGVH*WAAPVP
Trigger: TGGCACTGGAGCAGCCCACCAATGGACACCCACCGT...CCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CCTCTGGGTGATCCGCGTTTGAGAACCCCTGGTCTGGGCAAGCCCTTCATGTCACTGAACGGCACACGGTaGGTGTCCATTGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLGDPRLRTPGLGKPFMSLNGTR*VSIGGL
Trigger: CAGCCCACCAATGGACACCCACCGTGTGCCGTTCAG...TGACATGAAGGGCTTGCCCAGACCAGGGGTTCTCAAACGCGGATCACCCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGGCTGTCGCCAGCATCTaGCTCTCCACAGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: QRKLDGPLALVRTKRAQKAVASI*LSTGGE
Trigger: CTCTCCTCCTGTGGAGAGCCAGATGCTGGCGACAGC...CTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp ATCAGACAGCTTGGAACCGGGGCTGGAGAGGGAAGCCCTGAGCCCTCAGCAAACTGTGCATGGCAAGAGTaGGAGGCCAGCGCACTTCGT +
Preference number: 4 (lower is better)
Translates to: IRQLGTGAGEGSPEPSANCAWQE*EASALR
Trigger: ACGAAGTGCGCTGGCCTCCCACTCTTGCCATGCACA...GTTTGCTGAGGGCTCAGGGCTTCCCTCTCCAGCCCCGGTTCCAAGCTGTCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCTGAGGGGTTAGGGTaGAGGACCACGGGACCGCTA +
Preference number: 4 (lower is better)
Translates to: LLSQRKLDGPLALVRTKRAEGLG*RTTGPL
Trigger: TAGCGGTCCCGTGGTCCTCCACCCTAACCCCTCAGC...CCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCAGATGATCCCAGCACCTaGTCACCCCTCCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LSQRKLDGPLALVRTKRADDPST*SPLPAL
Trigger: AAGGGCAGGGAGGGGTGACCAGGTGCTGGGATCATC...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 72 bp ATGCTACGCCCTCCTCCAGCACCGAGCCCAGGGTGTTaGCTCAAGTTTCCTCGTGGGGGATCAGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: MLRPPPAPSPGC*LKFPRGGSDSL
Trigger: CAAGCTGTCTGATCCCCCACGAGGAAACTTGAGCAAACACCCTGGGCTCGGTGCTGGAGGAGGGCGTAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACCACAATCTTCCCTGTaGCGAGCAGGTTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LSQRKLDGPLALVRTKRAPQSSL*RAGSGP
Trigger: TGGCCCTGAACCTGCTCGTCACAGGGAAGATTGTGG...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCCAGGTGGCTGAGCTCTaGGCGTGGTCTCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGQVAEL*AWSREQ
Trigger: CTGCTCCCGAGACCACGCTCAGAGCTCAGCCACCTG...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp GGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGCTGGAGAGGGAAGCCCTaGGCCCTCAGCAAACATCAG +
Preference number: 4 (lower is better)
Translates to: GWQAHLTLLPGLSSPQEGWRGKP*ALSKHQ
Trigger: CTGATGTTTGCTGAGGGCTCAGGGCTTCCCTCTCCA...GCCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp CCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGGACCCCTTGCCCTTGTaGGGACCAAGCGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: PCEDQAGTEVSGKNSRDQDPLPL*GPSGHR
Trigger: TCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTC...CTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp CAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGGCATTTGTGCCTTGGTaGTGGTGCCAGCTGCCACTC +
Preference number: 4 (lower is better)
Translates to: QRKLDGPLALVRTKRAQKAFVPW*WCQLPL
Trigger: GAGTGGCAGCTGGCACCATCACCAAGGCACAAATGC...CTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCACCTCCTTCCCCTTCCTaGTCCTTCAGGCGCGCCGTC +
Preference number: 4 (lower is better)
Translates to: AEWGQVSSEESPVSVCMAPPSPS*SFRRAV
Trigger: GACGGCGCGCCTGAAGGAGCAGGAAGGGGAAGGAGG...TGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CAAGAGAGCCGACTTAGAATGACCTCCAGAAGGCACTGTGACCTTGGTAGTGTCGGGGCTGCCCAAGAATaGCCCAAGCCTCCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: QESRLRMTSRRHCDLGSVGAAQE*PKPPQA
Trigger: CGCCTGGGGAGGCTTGGGGCATTCTTGGGCAGCCCC...GACACTACCAAGGTCACAGTGCCTTCTGGAGGTCATTCTAAGTCGGCTCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp AGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGGGGGCTGCCCAAGAATaGCCCAAGCCTCCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: RVGTGFFRGISCECVHGKGAAQE*PKPPQA
Trigger: CGCCTGGGGAGGCTTGGGGCATTCTTGGGCAGCCCC...CTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp AGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGTGGCTGGGTCGTGGGTaGAAAGCGAGGTCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RVGTGFFRGISCECVHGKWLGRG*KARSGG
Trigger: GCCGCCGGACCTCGCTTTGCACCCACGACCCAGCCA...CTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCAACAGATCCAGCACATaGTCTGCGGCCCGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGNRSST*SAARPR
Trigger: GCGGGGCCGGGCCGCAGAGCATGTGCTGGATCTGTT...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GGGCATCACCATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTATGTCCATTGGTGGGCTaGTCCAGTGCCAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GHHHGDTARQWGRGDVFLCPLVG*SSASSL
Trigger: GAGACTGCTGGCACTGGAGCAGCCCACCAATGGACA...TAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGATGTCCATTGGTGGGCTaGTCCAGTGCCAGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: HGDTARQWGRGDVFLARGCPLVG*SSASSL
Trigger: GAGACTGCTGGCACTGGAGCAGCCCACCAATGGACA...TCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAGGTCACCAGCATTCCTaGCAAGGATGGGGAACAGGG +
Preference number: 4 (lower is better)
Translates to: HGDTARQWGRGDVFLARGGHQHS*QGWGTG
Trigger: CCCTGTTCCCCATCCTTGGCAGGAATGCTGGTGACC...TCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGGCCCCAGCTGCGCCGTaGCTCTGCTGCTCCAGATCT +
Preference number: 4 (lower is better)
Translates to: GTGFFRGISCECVHGKSGAPAAP*LCCSRS
Trigger: AGATCTGGAGCAGCAGAGCCACGGCGCAGCTGGGGC...CCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGGACTTAGGTGAGATGTaGCCCCGCTTCCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: VRTKRAQKYLARTVGTRGDLGEM*PRFRGT
Trigger: GGTGCCTCGGAAGCGGGGCCACATCTCACCTAAGTC...CCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCGCAGCCCTAGGAGAGTaGAATTGGCCATGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGAALGE*NWPWGG
Trigger: CCCGCCCCATGGCCAATTCCACTCTCCTAGGGCTGC...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGATCTTGGCTGGGTCGTaGGTGCAAAGCGAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: DTARQWGRGDVFLARGSWILAGS*VQSEVR
Trigger: CCGGACCTCGCTTTGCACCCACGACCCAGCCAAGAT...CCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGGGAGCAGATCTTGGCTaGGTCGTGGGTGCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: GWTPCPCEDQAGTEVSGKGADLG*VVGAKR
Trigger: TCGCTTTGCACCCACGACCCAGCCAAGATCTGCTCC...CTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGCCCACTAGGCAGGGCTaGAGAGCTCCTCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GTGFFRGISCECVHGKSGPTRQG*RAPLAP
Trigger: TGGGGCCAGAGGAGCTCTCCAGCCCTGCCTAGTGGG...CCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp TCTCCACAGCACTGTGGGAGGCTGAACGGCACACGGTGGGTGTCCATTGGTGGGCAGAAGAGGGAATTTTaGAAAGGGGTGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPQHCGRLNGTRWVSIGGQKREF*KGVAWL
Trigger: CAGCCAGGCCACCCCTTTCCAAAATTCCCTCTTCTG...CCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCAAGACTTTGGCATAATTaGCAGGTGCCGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: LSQRKLDGPLALVRTKRARLWHN*QVPPPP
Trigger: GGGTGGGGGCGGCACCTGCCAATTATGCCAAAGTCT...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAACGCTCAGGGTCCTCTaGGCCGGGAGGACCATCATC +
Preference number: 4 (lower is better)
Translates to: AEWGQVSSEESPVSVCMATLRVL*AGRTII
Trigger: GATGATGGTCCTCCCGGCTCAGAGGACCCTGAGCGT...TGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp CCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAATCAGGGCCACCGTCTTaGTGTTGGAGTAGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: PEEVGWTPCPCEDQAGTESGPPS*CWSRSR
Trigger: GCGACTTCTACTCCAACATCAAGACGGTGGCCCTGA...TTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACTTCCTCCCATGACTTaGTCTGGGGCCACACTGATC +
Preference number: 4 (lower is better)
Translates to: LSQRKLDGPLALVRTKRALPPMT*SGATLI
Trigger: GATCAGTGTGGCCCCAGATCAAGTCATGGGAGGAAG...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCCGGCCCCTGGAAGCATaGTGTGGGGGAAACAAGCTG +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGRPLEA*CGGNKL
Trigger: CAGCTTGTTTCCCCCACATCATGCTTCCAGGGGCCG...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp CAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGGGTGGAAAGGAGGGATaGGGCGGCAGTGTGCATGAG +
Preference number: 4 (lower is better)
Translates to: QWGRGDVFLARGSWMDPLGGKEG*GGSVHE
Trigger: CTCATGCACACTGCCGCCTCATCCCTCCTTTCCACC...CAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp GCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAGACCCCTTGCCCTTGTaGGGACCAAGCGGGCACAGA +
Preference number: 4 (lower is better)
Translates to: AEWGQVSSEESPVSVCMADPLPL*GPSGHR
Trigger: TCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTC...TGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp CTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGCCAATGGGGCAGAGGTaGCGTCTTCTTAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLSQRKLDGPLALVRTKRPMGQR*RLLSQR
Trigger: CCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGG...CCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp GTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCAACGGGTTGGAGTGTaGGTAGGACCTGGCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VRTKRAQKYLARTVGTRGQRVGV*VGPGPL
Trigger: CAAAGGGCCAGGTCCTACTCACACTCCAACCCGTTG...CCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGAGGTGTTCCCCAGCCTaGTGGGGAGATCCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VRTKRAQKYLARTVGTRGRCSPA*WGDPSC
Trigger: ACAGCTTGGATCTCCCCATCAGGCTGGGGAACACCT...CCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGATGGGCCTCGCCACCTaGATCTGCCACAATGCAAGG +
Preference number: 4 (lower is better)
Translates to: DTARQWGRGDVFLARGSWMGLAT*ICHNAR
Trigger: CCTTGCATTGTGGCAGATTCAGGTGGCGAGGCCCAT...CCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGGAATCACAACCCAGGTaGGTGCCAGGTCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VRTKRAQKYLARTVGTRGESQPR*VPGLCW
Trigger: CCAGCAGAGACCTGGCACTCACCTGGGTTGTGATTC...CCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp CTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGGGCGGTTGGATCCCTaGCACTTGGGTCTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: LLSQRKLDGPLALVRTKRGRLDP*HLGLKQ
Trigger: TTGCTTGAGACCCAAGTGGCAGGGATCCAACCGCCC...CCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GGGCATCACCATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTACTTCCTCCTCCTTCCTaGAGTCTCCACAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: GHHHGDTARQWGRGDVFLLPPPS*SLHSTV
Trigger: CACAGTGCTGTGGAGACTGCAGGAAGGAGGAGGAAG...TAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGACTTCCTCCTCCTTCCTaGAGTCTCCACAGCACTGTG +
Preference number: 4 (lower is better)
Translates to: HGDTARQWGRGDVFLARGLPPPS*SLHSTV
Trigger: CACAGTGCTGTGGAGACTGCAGGAAGGAGGAGGAAG...TCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp GTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGCAGGCAGAACTGTGTaGCAGGAAGGCCGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: VGTGFFRGISCECVHGKSAGRTV*QEGRAL
Trigger: GAGGGCCCGGCCTTCCTGGCACACAGTTCTGCCTGC...ACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGTCACCATGGGGACACTaGTCGCCAATGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PCEDQAGTEVSGKNSRDQSPWGH*SPMGQR
Trigger: CCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGA...CTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCGGGAGGCATAGCTTCTaGCCTCAGGGACCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGGRHSF*PQGPPV
Trigger: GACTGGGGGTCCCTGAGGGCAGAAGCTATGCCTCCC...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp TTGCTATCTTTCCTCAGGATGGCAAGAACCAAGGGCTTAGCTTCCTCCCATGACCGGGGCTGGCCCTCGTaGTCATCACGCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLSFLRMARTKGLASSHDRGWPS*SSRSGS
Trigger: GGACCCTGAGCGTGATGACCACGAGGGCCAGCCCCG...GTCATGGGAGGAAGCTAAGCCCTTGGTTCTTGCCATCCTGAGGAAAGATAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp ACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCTGTGGTTCGGGCGGTTaGGGGGCTGCCCAAGAATGC +
Preference number: 4 (lower is better)
Translates to: TKRAQKYLARTVGTRGLFCGSGG*GAAQEC
Trigger: GCATTCTTGGGCAGCCCCCCAACCGCCCGAACCACA...GAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp TCTCCACAGCACTGTGGGAGGCTGAACGGCACACGGTGGGTGTCCATTGGTGGGGCATTGTGTTGGAAGTaGACGCTGAAGGTCCCATTG +
Preference number: 4 (lower is better)
Translates to: SPQHCGRLNGTRWVSIGGALCWK*TLKVPL
Trigger: CAATGGGACCTTCAGCGTCCACTTCCAACACAATGC...CCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGGGAGCAGATCTTGGCTaGGTCGTGGGTGCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: DTARQWGRGDVFLARGSWGADLG*VVGAKR
Trigger: TCGCTTTGCACCCACGACCCAGCCAAGATCTGCTCC...CCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGTCCACAGCTTCAGGTTaGGACCAGCACTTGGGACCC +
Preference number: 4 (lower is better)
Translates to: VRTKRAQKYLARTVGTRGSTASG*DQHLGP
Trigger: GGGTCCCAAGTGCTGGTCCCAACCTGAAGCTGTGGA...CCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGCTCTCTGTGGCTCCGTaGCAAAGCCCTGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PCEDQAGTEVSGKNSRDQLSVAP*QSPVRL
Trigger: CAGCCTCACAGGGCTTTGCCACGGAGCCACAGAGAG...CTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAAAGGGGTGGCCTGGCTaGAGACAGATGGTCAATCTG +
Preference number: 4 (lower is better)
Translates to: PEEVGWTPCPCEDQAGTEKGWPG*RQMVNL
Trigger: CAGATTGACCATCTGTCTCCAGCCAGGCCACCCCTT...TTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GGGCATCACCATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTATGGAAAGGGGTGGCCTaGCTGGAGACAGATGGTCAA +
Preference number: 4 (lower is better)
Translates to: GHHHGDTARQWGRGDVFLWKGVA*LETDGQ
Trigger: TTGACCATCTGTCTCCAGCCAGGCCACCCCTTTCCA...TAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CCTCTGGGTGATCCGCGTTTGAGAACCCCTGGTCTGGGCAAGCCCTTCATGTCAGCTGTGGCCTTAGTGTaGGAGGACCACAATCGTCCT +
Preference number: 4 (lower is better)
Translates to: PLGDPRLRTPGLGKPFMSAVALV*EDHNRP
Trigger: AGGACGATTGTGGTCCTCCCACACTAAGGCCACAGC...TGACATGAAGGGCTTGCCCAGACCAGGGGTTCTCAAACGCGGATCACCCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp TCTCCACAGCACTGTGGGAGGCTGAACGGCACACGGTGGGTGTCCATTGGTGGGTGGATCCCTGCCACTTaGGTCTCAAGCAAATGTCCT +
Preference number: 4 (lower is better)
Translates to: SPQHCGRLNGTRWVSIGGWIPAT*VSSKCP
Trigger: AGGACATTTGCTTGAGACCCAAGTGGCAGGGATCCA...CCCACCAATGGACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCTGTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGCAGACAAGGTGCCACTaGCAGCTGGCCATTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLSQRKLDGPLALVRTKRQTRCH*QLAILR
Trigger: CCTCAGAATGGCCAGCTGCCAGTGGCACCTTGTCTG...CCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CAAGAGAGCCGACTTAGAATGACCTCCAGAAGGCACTGTGACCTTGGTAGTGTCGTTTGCGCGGAGCGCTaGTGGGCAGGGGCGAAAGGT +
Preference number: 4 (lower is better)
Translates to: QESRLRMTSRRHCDLGSVVCAER*WAGAKG
Trigger: ACCTTTCGCCCCTGCCCACCAGCGCTCCGCGCAAAC...GACACTACCAAGGTCACAGTGCCTTCTGGAGGTCATTCTAAGTCGGCTCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCCTGAACGGCACACGGTaGGTGTCCATTGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGLNGTR*VSIGGL
Trigger: CAGCCCACCAATGGACACCCACCGTGTGCCGTTCAG...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp CAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGCCAGAGGAAGTTGGATaGACCCCTTGCCCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: QRKLDGPLALVRTKRAQKPEEVG*TPCPCE
Trigger: CTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGG...CTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp TCCCTCCCTGAGCTGTTCTTGAAGATGCTACGCCCTCCTCCAGCACCGAGCCCATTAGCCAGAGGAAGTTaGATGGACCCCTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SLPELFLKMLRPPPAPSPLARGS*MDPLPL
Trigger: CAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAA...TGGGCTCGGTGCTGGAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GGGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGTTGAAGGGCAGTGGATaGGGAAGGTCAACGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GVASPSYLTARTLLSSRGLKGSG*GRSTGW
Trigger: CCAACCCGTTGACCTTCCCCATCCACTGCCCTTCAA...CCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GACAACTCTGACTCCAGTGCCCCGGGGCAAGCTTTATTTCCTGCTCCAAGAACACCTGACCAGGTGGCCTaGGATGAGGAACTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DNSDSSAPGQALFPAPRTPDQVA*DEELGG
Trigger: GCCTCCCAGTTCCTCATCCCAGGCCACCTGGTCAGG...TGTTCTTGGAGCAGGAAATAAAGCTTGCCCCGGGGCACTGGAGTCAGAGTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 72 bp TGCGGAGCCATAGCCAGAGATGAACTTCAAGGTCCTTaGAGTGGGTCTCCCAGCATGGGCCCTGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CGAIARDELQGP*SGSPSMGPGAA
Trigger: TGCTGCTCCAGGGCCCATGCTGGGAGACCCACTCAAAGGACCTTGAAGTTCATCTCTGGCTATGGCTCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 72 bp GGACCGCTAAACGGTCTGAGGGCATTTCAGACTGCCTaGAAGGGCAGTGGATGGGGAAGGTCAACGGGTTGG +
Preference number: 4 (lower is better)
Translates to: GPLNGLRAFQTA*KGSGWGRSTGW
Trigger: CCAACCCGTTGACCTTCCCCATCCACTGCCCTTCAAGGCAGTCTGAAATGCCCTCAGACCGTTTAGCGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp CATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGGCCTTGGCTTCGATaGAGATCTGCTGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HGDTARQWGRGDVFLARGRPWLR*RSAVPG
Trigger: ACCAGGAACAGCAGATCTTCATCGAAGCCAAGGCCT...TCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp CAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGACTCCATCCGGCAGTTaGAGATTTTGGAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: QRKLDGPLALVRTKRAQKTPSGS*RFWRPW
Trigger: CCAAGGCCTCCAAAATCTTCAACTGCCGGATGGAGT...CTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCGGGAGAACCCCGGTCTaGCAGGTGAGGCTGACTGTT +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGGRTPV*QVRLTV
Trigger: AACAGTCAGCCTCACCTGTCAGACCGGGGTTCTCCC...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp TATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGACCCGTGCCCGCTGCTaGGAGGGCGGCGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: YLARTVGTRGLFQRIKVWTRARC*EGGAIQ
Trigger: CTGGATGGCGCCGCCCTCTCAGCAGCGGGCACGGGT...CCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp CCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGGGACCAAGGGATGCCTaGGGCCCTTTCCTTGGACAA +
Preference number: 4 (lower is better)
Translates to: PCEDQAGTEVSGKNSRDQGPRDA*GPFLGQ
Trigger: TTGTCCAAGGAAAGGGCCTCAGGCATCCCTTGGTCC...CTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGTCCCTGAGCTGTTCTTaGAGATGCTACGCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VRTKRAQKYLARTVGTRGSLSCS*RCYALL
Trigger: GAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGA...CCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCAAGAGCCGACTTAGAATaGCCTCCAGAAGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LSQRKLDGPLALVRTKRARADLE*PPEGTV
Trigger: CACAGTGCCTTCTGGAGGTCATTCTAAGTCGGCTCT...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp AGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGCACTGTGGGAGGCTaGACGGCACACGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: RVGTGFFRGISCECVHGKSTVGG*TAHGGC
Trigger: ACACCCACCGTGTGCCGTTCAGCCTCCCACAGTGCT...CTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CAAGAGAGCCGACTTAGAATGACCTCCAGAAGGCACTGTGACCTTGGTAGTGTCAAGGGCCCTGAGTGCTaGCCTCCCAAGAGAGCCGAC +
Preference number: 4 (lower is better)
Translates to: QESRLRMTSRRHCDLGSVKGPEC*PPKRAD
Trigger: GTCGGCTCTCTTGGGAGGGCAGCACTCAGGGCCCTT...GACACTACCAAGGTCACAGTGCCTTCTGGAGGTCATTCTAAGTCGGCTCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp ACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCTCACCATGGGGACACTaGTCGCCAATGGGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TKRAQKYLARTVGTRGLFSPWGH*SPMGQR
Trigger: CCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGA...GAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGGACTCAGTTCCCGCTTaGTCATCCCAGGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: QRKLDGPLALVRTKRAQKDSVPA*SSQERE
Trigger: TTCCCTTTCCTGGGATGAGCAAGCGGGAACTGAGTC...CTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGCAGCCCTAGGAGAGTaGAATTGGCCATGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: VGTGFFRGISCECVHGKSAALGE*NWPWGG
Trigger: CCCGCCCCATGGCCAATTCCACTCTCCTAGGGCTGC...ACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCCTCGGGAGCAGATCTTaGCTGGGTCGTGGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGLGSRS*LGRGCK
Trigger: TTTGCACCCACGACCCAGCCAAGATCTGCTCCCGAG...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGCAGCTCCAGGTaGCTGAGCTCTGAGCGTGGT +
Preference number: 4 (lower is better)
Translates to: VGTGFFRGISCECVHGKSGSSSR*LSSERG
Trigger: ACCACGCTCAGAGCTCAGCCACCTGGAGCTGCTCCC...ACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCACGACTTTGAAGGGCTaGGAGCAGCTCCAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGTTLKG*EQLQVA
Trigger: AGCCACCTGGAGCTGCTCCCAGCCCTTCAAAGTCGT...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GACAACTCTGACTCCAGTGCCCCGGGGCAAGCTTTATTTCCTGCTCCAAGAACACTGCCACTTGAGACTTaGCCCTGGCCCCACTTGGCA +
Preference number: 4 (lower is better)
Translates to: DNSDSSAPGQALFPAPRTLPLET*PWPHLA
Trigger: TGCCAAGTGGGGCCAGGGCCAAGTCTCAAGTGGCAG...TGTTCTTGGAGCAGGAAATAAAGCTTGCCCCGGGGCACTGGAGTCAGAGTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GGGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGGCTCAAGTTTCCTCGTaGGGGATCAGACAGCTTGGA +
Preference number: 4 (lower is better)
Translates to: GVASPSYLTARTLLSSRGAQVSS*GIRQLG
Trigger: TCCAAGCTGTCTGATCCCCCACGAGGAAACTTGAGC...CCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGCAGAGGAGAATGGACATaGCCAAGGCCACGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GWQAHLTLLPGLSSPQEGRGEWT*PRPRSK
Trigger: TTTGCTGCGTGGCCTTGGCCATGTCCATTCTCCTCT...GCCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp AAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAGTGGGTCTCCCAGCATaGGCCCTGGAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KRAQKYLARTVGTRGLFQVGLPA*ALEQQH
Trigger: ATGCTGCTGCTCCAGGGCCCATGCTGGGAGACCCAC...TTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGCCCTGGAAGCATGATGTaGGGGAAACAAGCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: GWQAHLTLLPGLSSPQEGPGSMM*GKQAGS
Trigger: TGACCCAGCTTGTTTCCCCCACATCATGCTTCCAGG...GCCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp CAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGGTTGGAAGTGGACGCTaGAGGTCCCATTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: QWGRGDVFLARGSWMDPLVGSGR*RSHCHG
Trigger: ACCATGGCAATGGGACCTTCAGCGTCCACTTCCAAC...CAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp CTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGAGGCCTTGGCTTCGATaGAGATCTGCTGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LLSQRKLDGPLALVRTKRRPWLR*RSAVPG
Trigger: ACCAGGAACAGCAGATCTTCATCGAAGCCAAGGCCT...CCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCCCTCCAGTGCTCCTGTaGTCTAGTCACTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGPPVLL*SSHSTA
Trigger: AGCTGTGGAGTGACTAGATCACAGGAGCACTGGAGG...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTTTCCTTGGACAACTCTaGCTCCAGTGCCCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: NTCVASLLAASAVQEDLAFLGQL*LQCPGA
Trigger: TGCCCCGGGGCACTGGAGTCAGAGTTGTCCAAGGAA...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAGGCAGCTGGCCATTCTaGGGCCTCTTACTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AEWGQVSSEESPVSVCMAGSWPF*GLLLAA
Trigger: TGCAGCTAGTAAGAGGCCTCAGAATGGCCAGCTGCC...TGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGCCAATGGGGCAGAGGTaGCGTCTTCTTAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GTGFFRGISCECVHGKSGPMGQR*RLLSQR
Trigger: CCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGG...CCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp TCCCTCCCTGAGCTGTTCTTGAAGATGCTACGCCCTCCTCCAGCACCGAGCCCAGCTTCGATGAAGATCTaGTGTTCCTGGTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: SLPELFLKMLRPPPAPSPASMKI*CSWWNS
Trigger: AGAGTTCCACCAGGAACAGCAGATCTTCATCGAAGC...TGGGCTCGGTGCTGGAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGTCTCCCCCTCCCTGTTaGTATCTTTCCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: VRTKRAQKYLARTVGTRGSPPPC*YLSSGW
Trigger: CCATCCTGAGGAAAGATAGCAACAGGGAGGGGGAGA...CCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCGCCACTTCAGCCTCATaGCATGCTCAGCACACGACA +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGATSAS*HAQHTT
Trigger: TGTCGTGTGCTGAGCATGGCATGAGGCTGAAGTGGC...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp TCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAAGTCCTAGCTGAGGAGATCCAGCACATGCTCTaGGGCCCGGCCCCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SKELRFGRKSVSEVLAEEIQHML*GPAPPH
Trigger: GTGGGGCGGGGCCGGGCCGCAGAGCATGTGCTGGAT...CTCCTCAGCTAGGACTTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGCCTCTGGCCCCATTaGTTCCTCCTCCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VGTGFFRGISCECVHGKSGLWPH*FLLLPA
Trigger: TGCAGGAAGGAGGAGGAAGCAATGGGGCCAGAGGCC...ACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp GCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAGTTGGATGGACCCCTTaGCCTTGTGAGGACCAAGCG +
Preference number: 4 (lower is better)
Translates to: AEWGQVSSEESPVSVCMAVGWTP*PCEDQA
Trigger: CGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAAC...TGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp GACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGGAGGGCATTTCAGACTaGCTTGAAGGGCAGTGGATG +
Preference number: 4 (lower is better)
Translates to: DTARQWGRGDVFLARGSWEGISD*LEGQWM
Trigger: CATCCACTGCCCTTCAAGGCAGTCTGAAATGCCCTC...CCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTGGCATAATTGGCAGGTaGCGCCCCCACCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: NTCVASLLAASAVQEDLAGIIGR*RPHPIL
Trigger: CAAGATGGGGTGGGGGCGGCACCTGCCAATTATGCC...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp ATATTCATTTGCTTTTGCCTTAAGCTTCATCGAGAAGGAGACTCGGGCATTGCTACCCGGGGCCGGGGCTaGCCCTCGTGGTCATCACGC +
Preference number: 4 (lower is better)
Translates to: IFICFCLKLHREGDSGIATRGRG*PSWSSR
Trigger: GCGTGATGACCACGAGGGCCAGCCCCGGCCCCGGGT...AGCAATGCCCGAGTCTCCTTCTCGATGAAGCTTAAGGCAAAAGCAAATGAATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp AAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAGACTTAGGTGAGATGTaGCCCCGCTTCCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: KRAQKYLARTVGTRGLFQDLGEM*PRFRGT
Trigger: GGTGCCTCGGAAGCGGGGCCACATCTCACCTAAGTC...TTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTATCTTGGCTGGGTCGTaGGTGCAAAGCGAGGTCCGG +
Preference number: 4 (lower is better)
Translates to: VGTGFFRGISCECVHGKSILAGS*VQSEVR
Trigger: CCGGACCTCGCTTTGCACCCACGACCCAGCCAAGAT...ACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GACAACTCTGACTCCAGTGCCCCGGGGCAAGCTTTATTTCCTGCTCCAAGAACACCCGGGTCACCCAGATaGGTAGTAGGGGGTATCACT +
Preference number: 4 (lower is better)
Translates to: DNSDSSAPGQALFPAPRTPGSPR*VVGGIT
Trigger: AGTGATACCCCCTACTACCCATCTGGGTGACCCGGG...TGTTCTTGGAGCAGGAAATAAAGCTTGCCCCGGGGCACTGGAGTCAGAGTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGATGGTCTCCTGCATaGGCAGGCCTGTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: AEWGQVSSEESPVSVCMARWSPA*AGLSFQ
Trigger: CTGGAAGGACAGGCCTGCCCATGCAGGAGACCATCT...TGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp AGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGCCCAGCATCTCTCTGTaGCTCCGTGGCAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: RVGTGFFRGISCECVHGKPSISL*LRGKAL
Trigger: CAGGGCTTTGCCACGGAGCCACAGAGAGATGCTGGG...CTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGTCCCATGACTTGATCTaGGGCCACACTGATCGGCCT +
Preference number: 4 (lower is better)
Translates to: PCEDQAGTEVSGKNSRDQSHDLI*GHTDRP
Trigger: AGGCCGATCAGTGTGGCCCCAGATCAAGTCATGGGA...CTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCGCCATCAGCAATGGGTaGTACAGGGGGAGTACTGGC +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGAISNG*YRGSTG
Trigger: GCCAGTACTCCCCCTGTACCACCCATTGCTGATGGC...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp TTGCTATCTTTCCTCAGGATGGCAAGAACCAAGGGCTTAGCTTCCTCCCATGACCCCCTCTCCGGGACATaGATGCTCCCAGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLSFLRMARTKGLASSHDPLSGT*MLPEEP
Trigger: TGGCTCCTCTGGGAGCATCCATGTCCCGGAGAGGGG...GTCATGGGAGGAAGCTAAGCCCTTGGTTCTTGCCATCCTGAGGAAAGATAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCAAAGGAACACCCTCATTaGCCCATTCTACCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: LSQRKLDGPLALVRTKRAKEHPH*PILPAS
Trigger: GCTAGCAGGTAGAATGGGCCAATGAGGGTGTTCCTT...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTGGGCTAGGACCCTGCTaGGTCTGCAGATGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: NTCVASLLAASAVQEDLAGLGPC*VCRWQF
Trigger: GAACTGCCATCTGCAGACCCAGCAGGGTCCTAGCCC...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp AGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGGTGGGTGTCCATTGGTaGGCTGCTCCAGTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RVGTGFFRGISCECVHGKVGVHW*AAPVPA
Trigger: TGCTGGCACTGGAGCAGCCCACCAATGGACACCCAC...CTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp AAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAACGGTGGGTGTCCATTaGTGGGCTGCTCCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: KRAQKYLARTVGTRGLFQTVGVH*WAAPVP
Trigger: TGGCACTGGAGCAGCCCACCAATGGACACCCACCGT...TTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGTTAGCCAGAGGAAGTTaGATGGACCCCTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: DTARQWGRGDVFLARGSWLARGS*MDPLPL
Trigger: CAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAA...CCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCGACACTGCTCGCCAATaGGGCAGAGGTGACGTCTTC +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGDTARQ*GRGDVF
Trigger: GAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCGTGCATCTCGAGCAATaGGCCTCGCCACCTGAATCT +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGVHLEQ*ASPPES
Trigger: AGATTCAGGTGGCGAGGCCCATTGCTCGAGATGCAC...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTGACCACCTGACCAGGTaGCCTGGGATGAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: NTCVASLLAASAVQEDLADHLTR*PGMRNW
Trigger: CCAGTTCCTCATCCCAGGCCACCTGGTCAGGTGGTC...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 72 bp TCTAGTCACTCCACAGCTTCAGGTTGGGACCAGCACTaGGGACCCTTTCTCTGCCACTTGAGACTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SSHSTASGWDQH*GPFLCHLRLGP
Trigger: AGGGCCAAGTCTCAAGTGGCAGAGAAAGGGTCCCAAGTGCTGGTCCCAACCTGAAGCTGTGGAGTGACTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCCATCCTGGCCACAGATaGCCAGATAGAGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGHPGHR*PDRGYP
Trigger: AGGGTAGCCTCTATCTGGTCATCTGTGGCCAGGATG...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp GGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGCATCCTGGCCACAGATaGCCAGATAGAGGCTACCCT +
Preference number: 4 (lower is better)
Translates to: GTGFFRGISCECVHGKSGHPGHR*PDRGYP
Trigger: AGGGTAGCCTCTATCTGGTCATCTGTGGCCAGGATG...CCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp GCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAGTTGGAAGTGGACGCTaGAGGTCCCATTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: AEWGQVSSEESPVSVCMAVGSGR*RSHCHG
Trigger: ACCATGGCAATGGGACCTTCAGCGTCCACTTCCAAC...TGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTAGACACAGACGACTTTaGAGGGCTGGGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NTCVASLLAASAVQEDLARHRRL*RAGSSS
Trigger: GGAGCTGCTCCCAGCCCTTCAAAGTCGTCTGTGTCT...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp TTGCTATCTTTCCTCAGGATGGCAAGAACCAAGGGCTTAGCTTCCTCCCATGACCCTTTCTCTGCCACTTaGGACTTGGCCCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLSFLRMARTKGLASSHDPFSAT*DLALAP
Trigger: TGGGGCCAGGGCCAAGTCTCAAGTGGCAGAGAAAGG...GTCATGGGAGGAAGCTAAGCCCTTGGTTCTTGCCATCCTGAGGAAAGATAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGCTTAGCTTCCTCCCATaGCTTGATCTGGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: GTGFFRGISCECVHGKSGLSFLP*LDLGPH
Trigger: GTGTGGCCCCAGATCAAGTCATGGGAGGAAGCTAAG...CCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp ACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAGCAGCGAGTCAGTTaGATCTTCCTCCTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: TKRAQKYLARTVGTRGLFQQRVS*IFLLRS
Trigger: AGAGCGGAGGAGGAAGATGCAACTGACTCGCTGCTG...GAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp TCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAAGTCCTAGCTGAGGAGTGGCTGGGTCGTGGGTaGAAAGCGAGGTCCGGCGGC +
Preference number: 4 (lower is better)
Translates to: SKELRFGRKSVSEVLAEEWLGRG*KARSGG
Trigger: GCCGCCGGACCTCGCTTTGCACCCACGACCCAGCCA...CTCCTCAGCTAGGACTTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCCACAACCCAGGTGAGTaGCAGGTCTCTGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGHNPGE*QVSAGI
Trigger: AATGCCAGCAGAGACCTGGCACTCACCTGGGTTGTG...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp CTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGTTTATTGGCAGCCTCTaGAGTTCAGGAGGACCTAGC +
Preference number: 4 (lower is better)
Translates to: LLSQRKLDGPLALVRTKRFIGSL*SSGGPS
Trigger: GCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAA...CCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp TCCCTCCCTGAGCTGTTCTTGAAGATGCTACGCCCTCCTCCAGCACCGAGCCCAATCTGCTGTTCCTGGTaGAACTCTACAGCTTTACTG +
Preference number: 4 (lower is better)
Translates to: SLPELFLKMLRPPPAPSPICCSW*NSTALL
Trigger: CAGTAAAGCTGTAGAGTTCCACCAGGAACAGCAGAT...TGGGCTCGGTGCTGGAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp AAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAACTCGGGAGCAGATCTTaGCTGGGTCGTGGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: KRAQKYLARTVGTRGLFQLGSRS*LGRGCK
Trigger: TTTGCACCCACGACCCAGCCAAGATCTGCTCCCGAG...TTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTACGACTTTGAAGGGCTaGGAGCAGCTCCAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VGTGFFRGISCECVHGKSTTLKG*EQLQVA
Trigger: AGCCACCTGGAGCTGCTCCCAGCCCTTCAAAGTCGT...ACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp AAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAACTTGAGACTTGGCCCTaGCCCCACTTGGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: KRAQKYLARTVGTRGLFQLETWP*PHLASP
Trigger: AGGAGATGCCAAGTGGGGCCAGGGCCAAGTCTCAAG...TTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGGTTGGGACCAGCACTTaGGACCCTTTCTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: GTGFFRGISCECVHGKSGVGTST*DPFSAT
Trigger: AGTGGCAGAGAAAGGGTCCCAAGTGCTGGTCCCAAC...CCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCCCAGAGGAAGTTGGATaGACCCCTTGCCCTTGTGAG +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGPEEVG*TPCPCE
Trigger: CTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGG...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp AGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGGACACTGCTCGCCAATaGGGCAGAGGTGACGTCTTC +
Preference number: 4 (lower is better)
Translates to: RVGTGFFRGISCECVHGKDTARQ*GRGDVF
Trigger: GAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC...CTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTTGTGCATGGCAAGAGTaGGAGGCCAGCGCACTTCGT +
Preference number: 4 (lower is better)
Translates to: VGTGFFRGISCECVHGKSCAWQE*EASALR
Trigger: ACGAAGTGCGCTGGCCTCCCACTCTTGCCATGCACA...ACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp AAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAATCAGGGCCACCGTCTTaGTGTTGGAGTAGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: KRAQKYLARTVGTRGLFQSGPPS*CWSRSR
Trigger: GCGACTTCTACTCCAACATCAAGACGGTGGCCCTGA...TTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp ATATTCATTTGCTTTTGCCTTAAGCTTCATCGAGAAGGAGACTCGGGCATTGCTGATCTGGGGCCACACTaGTCGGCCTGCCCACAGGCC +
Preference number: 4 (lower is better)
Translates to: IFICFCLKLHREGDSGIADLGPH*SACPQA
Trigger: GGCCTGTGGGCAGGCCGATCAGTGTGGCCCCAGATC...AGCAATGCCCGAGTCTCCTTCTCGATGAAGCTTAAGGCAAAAGCAAATGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCACCAGCCGATAGTCCGTaGTGTAGAAGGCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: AEWGQVSSEESPVSVCMAPADSP*CRRRCR
Trigger: TCTACATCGCCTTCTACAGCACGGACTATCGGCTGG...TGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTAGGCCTCTTACTAGCTaGAGGAGGGGAGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: NTCVASLLAASAVQEDLARPLTS*RRGVTD
Trigger: GTCAGTCACTCCCCTCCTGCAGCTAGTAAGAGGCCT...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTCACCCAACTCTGCGCTaGAGTATGAGGGGACCAGTT +
Preference number: 4 (lower is better)
Translates to: NTCVASLLAASAVQEDLAHPTLR*SMRGPV
Trigger: AACTGGTCCCCTCATACTGCAGCGCAGAGTTGGGTG...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp AGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGTCAAAGTGCCCCCAGTaGCTGCTGAGAGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RVGTGFFRGISCECVHGKSKCPQ*LLRVQP
Trigger: TGGCTGAACTCTCAGCAGGCACTGGGGGCACTTTGA...CTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp GTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTGAATCTGCCACAATaGAAGGTCACCAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: VRTKRAQKYLARTVGTRGLNLPQ*KVTSIP
Trigger: AGGAATGCTGGTGACCTTGCATTGTGGCAGATTCAG...CCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp CCTCTGGGTGATCCGCGTTTGAGAACCCCTGGTCTGGGCAAGCCCTTCATGTCACTCTACAATCCCTCCTaGACATACTCACTCGATGAT +
Preference number: 4 (lower is better)
Translates to: PLGDPRLRTPGLGKPFMSLYNPS*TYSLDD
Trigger: ATCATCGAGTGAGTATGTGCAGGAGGGATTGTAGAG...TGACATGAAGGGCTTGCCCAGACCAGGGGTTCTCAAACGCGGATCACCCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GGGCATCACCATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAATCTGCTGTTCCTGGTaGAACTCTACAGCTTTACTG +
Preference number: 4 (lower is better)
Translates to: GHHHGDTARQWGRGDVFLICCSW*NSTALL
Trigger: CAGTAAAGCTGTAGAGTTCCACCAGGAACAGCAGAT...TAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp CAAGAGAGCCGACTTAGAATGACCTCCAGAAGGCACTGTGACCTTGGTAGTGTCGTGTGCCATCAGCAATaGGTGGTACAGGGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: QESRLRMTSRRHCDLGSVVCHQQ*VVQGEY
Trigger: GTACTCCCCCTGTACCACCCATTGCTGATGGCACAC...GACACTACCAAGGTCACAGTGCCTTCTGGAGGTCATTCTAAGTCGGCTCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp AGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGTGGGCTGTAACCAGATaGCTTCTCAGCCCCACCCAA +
Preference number: 4 (lower is better)
Translates to: RVGTGFFRGISCECVHGKWAVTR*LLSPTQ
Trigger: TTGGGTGGGGCTGAGAAGCCATCTGGTTACAGCCCA...CTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAATCATTTCCTACAAGGTaGGCTGTAACCAGATGGCTT +
Preference number: 4 (lower is better)
Translates to: PEEVGWTPCPCEDQAGTESFPTR*AVTRWL
Trigger: AAGCCATCTGGTTACAGCCCACCTTGTAGGAAATGA...TTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 72 bp GATGGTCAATCTGTCAAGACATCAAAGACCCCAGGGTaGCCACTTCAGCCTCATGCCATGCTCAGCACACGA +
Preference number: 4 (lower is better)
Translates to: DGQSVKTSKTPG*PLQPHAMLSTR
Trigger: TCGTGTGCTGAGCATGGCATGAGGCTGAAGTGGCAACCCTGGGGTCTTTGATGTCTTGACAGATTGACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 72 bp ATCTGTGTGTTAACAAACCCTCTGGGTGATCCGCGTTaGAGAACCCCTGGTCTGGGCAAGCCCTTCATGTCA +
Preference number: 4 (lower is better)
Translates to: ICVLTNPLGDPR*RTPGLGKPFMS
Trigger: TGACATGAAGGGCTTGCCCAGACCAGGGGTTCTCAAACGCGGATCACCCAGAGGGTTTGTTAACACACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 72 bp CCGGTTCTCCTGGCAGTACCACAGGACTCGGAATCTTaGGAAGTAACATTTCTGTCTCCCACTCCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: PVLLAVPQDSES*EVTFLSPTPSD
Trigger: ATCGCTGGGAGTGGGAGACAGAAATGTTACTTCCAAAGATTCCGAGTCCTGTGGTACTGCCAGGAGAACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp AAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAACAGAGGAATCTCCTGTaGGTGTGTGCATGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: KRAQKYLARTVGTRGLFQQRNLL*VCAWQE
Trigger: CTCTTGCCATGCACACACTCACAGGAGATTCCTCTG...TTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp TATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGTCCCAGAGGCTCCACTaGTGGAGGAGACAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: YLARTVGTRGLFQRIKVWSQRLH*WRRQGP
Trigger: GGGGCCTTGTCTCCTCCATCAGTGGAGCCTCTGGGA...CCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCTTGAGAAAGGAATGCTaGGACCCAGACAGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGLRKEC*DPDSAF
Trigger: AAAGGCGCTGTCTGGGTCTCAGCATTCCTTTCTCAA...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCGAGATTCACCCTACTTaGGAAAGGAATGCTGAGACC +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGEIHPT*ERNAET
Trigger: GGTCTCAGCATTCCTTTCTCAAGTAGGGTGAATCTC...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GCAAGCTTTATTTCCTGCTCCAAGAACACGATTCTTCACACAAAAGTCAGCAATGCGCCGTGGCTCTGCTaGTCCAGATCTGCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: ASFISCSKNTILHTKVSNAPWLC*SRSALG
Trigger: GCCGAGCGCAGATCTGGAGCAGCAGAGCCACGGCGC...ATTGCTGACTTTTGTGTGAAGAATCGTGTTCTTGGAGCAGGAAATAAAGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp CAAGAGAGCCGACTTAGAATGACCTCCAGAAGGCACTGTGACCTTGGTAGTGTCCCAGCCGATAGTCCGTaGTGTAGAAGGCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: QESRLRMTSRRHCDLGSVPADSP*CRRRCR
Trigger: TCTACATCGCCTTCTACAGCACGGACTATCGGCTGG...GACACTACCAAGGTCACAGTGCCTTCTGGAGGTCATTCTAAGTCGGCTCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTCCACTCCTCCTCCAGTaGTCCTGTGATCTAGTCACT +
Preference number: 4 (lower is better)
Translates to: VGTGFFRGISCECVHGKSPLLLQ*SCDLVT
Trigger: AGTGACTAGATCACAGGAGCACTGGAGGAGGAGTGG...ACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp ATATTCATTTGCTTTTGCCTTAAGCTTCATCGAGAAGGAGACTCGGGCATTGCTGCAGGCAGAACTGTGTaGCAGGAAGGCCGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: IFICFCLKLHREGDSGIAAGRTV*QEGRAL
Trigger: GAGGGCCCGGCCTTCCTGGCACACAGTTCTGCCTGC...AGCAATGCCCGAGTCTCCTTCTCGATGAAGCTTAAGGCAAAAGCAAATGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp TTGCTATCTTTCCTCAGGATGGCAAGAACCAAGGGCTTAGCTTCCTCCCATGACGGTGATGGTGCCAGCTaGCACTCCAAGACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLSFLRMARTKGLASSHDGDGAS*HSKTLA
Trigger: TGCCAAAGTCTTGGAGTGGCAGCTGGCACCATCACC...GTCATGGGAGGAAGCTAAGCCCTTGGTTCTTGCCATCCTGAGGAAAGATAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAGCATTGTGTTGGAAGTaGACGCTGAAGGTCCCATTG +
Preference number: 4 (lower is better)
Translates to: AEWGQVSSEESPVSVCMAALCWK*TLKVPL
Trigger: CAATGGGACCTTCAGCGTCCACTTCCAACACAATGC...TGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTCCTGTGGCATTGTGTTaGAAGTGGACGCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: NTCVASLLAASAVQEDLAPVALC*KWTLKV
Trigger: GACCTTCAGCGTCCACTTCCAACACAATGCCACAGG...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp ACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCTGTTTCCCTGGCCTGTaGCATTGTGTTGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: TKRAQKYLARTVGTRGLFCFPGL*HCVGSG
Trigger: TCCACTTCCAACACAATGCCACAGGCCAGGGAAACA...GAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GGGCATCACCATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAAAGATCTGCTGTTCCTaGTGGAACTCTACAGCTTTA +
Preference number: 4 (lower is better)
Translates to: GHHHGDTARQWGRGDVFLKICCS*WNSTAL
Trigger: TAAAGCTGTAGAGTTCCACCAGGAACAGCAGATCTT...TAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAAGGGGATCAGACAGCTTaGAACCGGGGCTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GPEGYSKELRFGRKSVSEGDQTA*NRGWRG
Trigger: CCCTCTCCAGCCCCGGTTCCAAGCTGTCTGATCCCC...TTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCGTGGGGGAAACAAGCTaGGTCATTTCCTACAAGGTG +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGVGETS*VISYKV
Trigger: CACCTTGTAGGAAATGACCCAGCTTGTTTCCCCCAC...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GCAAGCTTTATTTCCTGCTCCAAGAACACGATTCTTCACACAAAAGTCAGCAATGGTGAGGCTGACTGTTaGGGGACCCCTCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: ASFISCSKNTILHTKVSNGEADC*GTPLRD
Trigger: GTCCCGGAGAGGGGTCCCTCAACAGTCAGCCTCACC...ATTGCTGACTTTTGTGTGAAGAATCGTGTTCTTGGAGCAGGAAATAAAGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp TTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAGGCATGTGGTCAGATTaGAAATCCAATACAATAGCC +
Preference number: 4 (lower is better)
Translates to: LDGPLALVRTKRAQKYLAGMWSD*KSNTIA
Trigger: GGCTATTGTATTGGATTTTCAATCTGACCACATGCC...TGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp CATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAATGAAGTTATTAAAATaGATCCATCCCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: HGDTARQWGRGDVFLARGMKLLK*IHPWCR
Trigger: CCTGCACCAGGGATGGATTCATTTTAATAACTTCAT...TCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCAATGAAGTTATTAAAATaGATCCATCCCTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSQRKLDGPLALVRTKRAMKLLK*IHPWCR
Trigger: CCTGCACCAGGGATGGATTCATTTTAATAACTTCAT...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp TATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGGGATGGGGAACAGGGTaGCTCAGTTCCCGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: YLARTVGTRGLFQRIKVWGWGTG*LSSRLL
Trigger: GAGCAAGCGGGAACTGAGTCACCCTGTTCCCCATCC...CCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTTGTTTCCCTGGCCTGTaGCATTGTGTTGGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: NTCVASLLAASAVQEDLACFPGL*HCVGSG
Trigger: TCCACTTCCAACACAATGCCACAGGCCAGGGAAACA...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGAAGATCTGCTGTTCCTaGTGGAACTCTACAGCTTTA +
Preference number: 4 (lower is better)
Translates to: DTARQWGRGDVFLARGSWKICCS*WNSTAL
Trigger: TAAAGCTGTAGAGTTCCACCAGGAACAGCAGATCTT...CCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAACAGCAGGGGTTGGGGTaGAAGAGGGACACACAGCAC +
Preference number: 4 (lower is better)
Translates to: GPEGYSKELRFGRKSVSEQQGLG*KRDTQH
Trigger: GTGCTGTGTGTCCCTCTTCCACCCCAACCCCTGCTG...TTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTCAGAGAAATTCTTCCTaGACCAAGGGATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VGTGFFRGISCECVHGKSQRNSS*TKGCLR
Trigger: CCTCAGGCATCCCTTGGTCCAGGAAGAATTTCTCTG...ACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GTTCTCCTGGCAGTACCACAGGACTCGGAATCTTTGGAAGTAACATTTCTGTCTAGGAGAGACGGCCCCTaGAAGCATGATGTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: VLLAVPQDSESLEVTFLSRRDGP*KHDVGE
Trigger: TTCCCCCACATCATGCTTCCAGGGGCCGTCTCTCCT...AGACAGAAATGTTACTTCCAAAGATTCCGAGTCCTGTGGTACTGCCAGGAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GTTCTCCTGGCAGTACCACAGGACTCGGAATCTTTGGAAGTAACATTTCTGTCTTGCCTTGAAGGGCAGTaGATGGGGAAGGTCAACGGG +
Preference number: 4 (lower is better)
Translates to: VLLAVPQDSESLEVTFLSCLEGQ*MGKVNG
Trigger: CCCGTTGACCTTCCCCATCCACTGCCCTTCAAGGCA...AGACAGAAATGTTACTTCCAAAGATTCCGAGTCCTGTGGTACTGCCAGGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 72 bp ATGAGGACCCAGCTATATCTTCCTGCAACACCTGTGTaGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: MRTQLYLPATPV*PVYWQPLQFRR
Trigger: CCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTTGCAGGAAGATATAGCTGGGTCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp TCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAAGTCCTAGCTGAGGAGAGACACAGACGACTTTaGAGGGCTGGGAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SKELRFGRKSVSEVLAEERHRRL*RAGSSS
Trigger: GGAGCTGCTCCCAGCCCTTCAAAGTCGTCTGTGTCT...CTCCTCAGCTAGGACTTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR TCA 90 bp TTGCTATCTTTCCTCAGGATGGCAAGAACCAAGGGCTTAGCTTCCTCCCATGACCCATCCATCCTAAGTTaGCAGGCTGTCCACACTGAT +
Preference number: 4 (lower is better)
Translates to: LLSFLRMARTKGLASSHDPSILS*QAVHTD
Trigger: ATCAGTGTGGACAGCCTGTCAACTTAGGATGGATGG...GTCATGGGAGGAAGCTAAGCCCTTGGTTCTTGCCATCCTGAGGAAAGATAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp TATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGCGAGCCCAGGGTGTTTaGTCAAGTTTCCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: YLARTVGTRGLFQRIKVWRAQGV*SSFLVG
Trigger: CCCCACGAGGAAACTTGAGCAAACACCCTGGGCTCG...CCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp TCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAAGTCCTAGCTGAGGAGTCCCAGCATGGGCCCTaGAGCAGCAGCATCAGCATA +
Preference number: 4 (lower is better)
Translates to: SKELRFGRKSVSEVLAEESQHGP*SSSISI
Trigger: TATGCTGATGCTGCTGCTCCAGGGCCCATGCTGGGA...CTCCTCAGCTAGGACTTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp TCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAAGTCCTAGCTGAGGAGAGTGTGAGTAGGACCTaGCCCTTTGGGGTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SKELRFGRKSVSEVLAEESVSRT*PFGVWA
Trigger: TGCCCAGACCCCAAAGGGCCAGGTCCTACTCACACT...CTCCTCAGCTAGGACTTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 72 bp GCTATATCTTCCTGCAACACCTGTGTTGCCAGTTTATaGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: AISSCNTCVASL*AASAVQEDLAC
Trigger: ACAAGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTTGCAGGAAGATATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCGCAAGCTTTATTTCCTaGTCCAAGAACACGATTCTT +
Preference number: 4 (lower is better)
Translates to: GRVGTGFFRGISCECVHGASFIS*SKNTIL
Trigger: AAGAATCGTGTTCTTGGAGCAGGAAATAAAGCTTGC...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp TATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGTCAAAGTGCCCCCAGTaGCTGCTGAGAGTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: YLARTVGTRGLFQRIKVWSKCPQ*LLRVQP
Trigger: TGGCTGAACTCTCAGCAGGCACTGGGGGCACTTTGA...CCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp ATATTCATTTGCTTTTGCCTTAAGCTTCATCGAGAAGGAGACTCGGGCATTGCTTCCCTGCCCTTCAGCTaGCTCCGTCCCCATAAACAC +
Preference number: 4 (lower is better)
Translates to: IFICFCLKLHREGDSGIASLPFS*LRPHKH
Trigger: GTGTTTATGGGGACGGAGGCAGCTGAAGGGCAGGGA...AGCAATGCCCGAGTCTCCTTCTCGATGAAGCTTAAGGCAAAAGCAAATGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp ATATTCATTTGCTTTTGCCTTAAGCTTCATCGAGAAGGAGACTCGGGCATTGCTTGCTGGGTCTGCAGATaGCAGTTCAGGGAGGACACC +
Preference number: 4 (lower is better)
Translates to: IFICFCLKLHREGDSGIACWVCR*QFREDT
Trigger: GGTGTCCTCCCTGAACTGCCATCTGCAGACCCAGCA...AGCAATGCCCGAGTCTCCTTCTCGATGAAGCTTAAGGCAAAAGCAAATGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp GTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGATGGAAATTACAGCTaGGAAATCACATCCGAGGTG +
Preference number: 4 (lower is better)
Translates to: VGTGFFRGISCECVHGKSDGNYS*EITSEV
Trigger: CACCTCGGATGTGATTTCCCAGCTGTAATTTCCATC...ACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp CAAGAGAGCCGACTTAGAATGACCTCCAGAAGGCACTGTGACCTTGGTAGTGTCAGCCTGTTCCTTCACTaGCATGTGGTCAGATTGAAA +
Preference number: 4 (lower is better)
Translates to: QESRLRMTSRRHCDLGSVSLFLH*HVVRLK
Trigger: TTTCAATCTGACCACATGCCAGTGAAGGAACAGGCT...GACACTACCAAGGTCACAGTGCCTTCTGGAGGTCATTCTAAGTCGGCTCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp TCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAAGTCCTAGCTGAGGAGGGAAGGTCAACGGGTTaGAGTGTGAGTAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: SKELRFGRKSVSEVLAEEGRSTG*SVSRTW
Trigger: CCAGGTCCTACTCACACTCCAACCCGTTGACCTTCC...CTCCTCAGCTAGGACTTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp TATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGGAGACAGGGGCCCTATaGAATCACAACCCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: YLARTVGTRGLFQRIKVWETGAL*NHNPGE
Trigger: CTCACCTGGGTTGTGATTCCATAGGGCCCCTGTCTC...CCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 72 bp TTTGCCTTAAGCTTCATCGAGAAGGAGACTCGGGCATaGCTACCAGTTGACCTAACGGGTAATCCCCCTTAT +
Preference number: 4 (lower is better)
Translates to: FALSFIEKETRA*LPVDLTGNPPY
Trigger: ATAAGGGGGATTACCCGTTAGGTCAACTGGTAGCAATGCCCGAGTCTCCTTCTCGATGAAGCTTAAGGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp TATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGACTCCATCCGGCAGTTaGAGATTTTGGAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: YLARTVGTRGLFQRIKVWTPSGS*RFWRPW
Trigger: CCAAGGCCTCCAAAATCTTCAACTGCCGGATGGAGT...CCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp TCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAAGTCCTAGCTGAGGAGCCTGTGGCATTGTGTTaGAAGTGGACGCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SKELRFGRKSVSEVLAEEPVALC*KWTLKV
Trigger: GACCTTCAGCGTCCACTTCCAACACAATGCCACAGG...CTCCTCAGCTAGGACTTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp GTTCTCCTGGCAGTACCACAGGACTCGGAATCTTTGGAAGTAACATTTCTGTCTATGGAGATGTTTCCCTaGCCTGTGGCATTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VLLAVPQDSESLEVTFLSMEMFP*PVALCW
Trigger: CCAACACAATGCCACAGGCCAGGGAAACATCTCCAT...AGACAGAAATGTTACTTCCAAAGATTCCGAGTCCTGTGGTACTGCCAGGAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GCAAGCTTTATTTCCTGCTCCAAGAACACGATTCTTCACACAAAAGTCAGCAATTCCCACTCCCAGCGATaGCACTGGATCACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: ASFISCSKNTILHTKVSNSHSQR*HWITSQ
Trigger: TTGGGAAGTGATCCAGTGTCATCGCTGGGAGTGGGA...ATTGCTGACTTTTGTGTGAAGAATCGTGTTCTTGGAGCAGGAAATAAAGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GCAAGCTTTATTTCCTGCTCCAAGAACACGATTCTTCACACAAAAGTCAGCAATCTCTGCTGGCATTTGTaGCTTGGTGATGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ASFISCSKNTILHTKVSNLCWHL*LGDGAS
Trigger: GCTGGCACCATCACCAAGGCACAAATGCCAGCAGAG...ATTGCTGACTTTTGTGTGAAGAATCGTGTTCTTGGAGCAGGAAATAAAGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp TATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGATGGAGATGTTTCCCTaGCCTGTGGCATTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: YLARTVGTRGLFQRIKVWMEMFP*PVALCW
Trigger: CCAACACAATGCCACAGGCCAGGGAAACATCTCCAT...CCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CCA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCTATCTAAGGAGGCTCTaGGAAATTATGTCATTTGTC +
Preference number: 4 (lower is better)
Translates to: QVSSEESPVSVCMARVGGYLRRL*EIMSFV
Trigger: GACAAATGACATAATTTCCCAGAGCCTCCTTAGATA...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR TCA 90 bp GCAAGCTTTATTTCCTGCTCCAAGAACACGATTCTTCACACAAAAGTCAGCAATCAGAGGAATCTCCTGTaGGTGTGTGCATGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: ASFISCSKNTILHTKVSNQRNLL*VCAWQE
Trigger: CTCTTGCCATGCACACACTCACAGGAGATTCCTCTG...ATTGCTGACTTTTGTGTGAAGAATCGTGTTCTTGGAGCAGGAAATAAAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR GCA 90 bp GGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAAGCTTCGATGAAGATCTaGTGTTCCTGGTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: GPEGYSKELRFGRKSVSEASMKI*CSWWNS
Trigger: AGAGTTCCACCAGGAACAGCAGATCTTCATCGAAGC...TTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR GCA 90 bp TCCAAAGAATTAAGGTTTGGGAGGAAATCTGTTAGCGAAGTCCTAGCTGAGGAGCCAGCTATATCTTCCTaGAACACCTGTGTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SKELRFGRKSVSEVLAEEPAISS*NTCVAS
Trigger: ACTGGCAACACAGGTGTTGCAGGAAGATATAGCTGG...CTCCTCAGCTAGGACTTCGCTAACAGATTTCCTCCCAAACCTTAATTCTTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
3UTR CAA 72 bp CACTCCAGCCTGTTCCTTCACTGGCATGTGGTCAGATaGAAAATCCAATACAATAGCCCCGATTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: HSSLFLHWHVVR*KIQYNSPDSLK
Trigger: TTTCAGAGAATCGGGGCTATTGTATTGGATTTTCAATCTGACCACATGCCAGTGAAGGAACAGGCTGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CCA 90 bp TATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGGCTGAATTAGAAATGTaGGTAGGACCCAGAAATCTG +
Preference number: 4 (lower is better)
Translates to: YLARTVGTRGLFQRIKVWAELEM*VGPRNL
Trigger: CAGATTTCTGGGTCCTACCCACATTTCTAATTCAGC...CCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS TCA 90 bp CCGGGGCCGGGGCTGGCCCTCGTGGTCATCACGCTCAGGGTCCTCTaGGCCGGGAGGACCATCATCCTGGCCACAGATGACCAGATAGAG +
Preference number: 5 (lower is better)
Translates to: PGPGLALVVITLRVL*AGRTIILATDDQIE
Trigger: CTCTATCTGGTCATCTGTGGCCAGGATGATGGTCCTCCCGGCTCAGAGGACCCTGAGCGTGATGACCACGAGGGCCAGCCCCGGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS CCA 90 bp AGCTCCAGGTGGCTGAGCTCTGAGCGTGGTCTCGGGAGCAGATCTTaGCTGGGTCGTGGGTGCAAAGCGAGGTCCGGCGGCCCCGTTCTA +
Preference number: 5 (lower is better)
Translates to: SSRWLSSERGLGSRS*LGRGCKARSGGPVL
Trigger: TAGAACGGGGCCGCCGGACCTCGCTTTGCACCCACGACCCAGCCAAGATCTGCTCCCGAGACCACGCTCAGAGCTCAGCCACCTGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328741.6
ENST00000513748.1
ENST00000570453.1
CDS-3UTR CAA 90 bp TCCCTCCCTGAGCTGTTCTTGAAGATGCTACGCCCTCCTCCAGCACCGAGCCCATGGCCCTGGCCCCACTaGGCATCTCCTCGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: SLPELFLKMLRPPPAPSPWPWPH*ASPRLH
Trigger: GTGGAGACGAGGAGATGCCAAGTGGGGCCAGGGCCA...TGGGCTCGGTGCTGGAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp ATCAGACAGCTTGGAACCGGGGCTGGAGAGGGAAGCCCTGAGCCCTCAGCAAACGGGGGATCAGACAGCTaGGAACCGGGGCTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: IRQLGTGAGEGSPEPSANGGSDS*EPGLER
Trigger: CCTCTCCAGCCCCGGTTCCAAGCTGTCTGATCCCCC...GTTTGCTGAGGGCTCAGGGCTTCCCTCTCCAGCCCCGGTTCCAAGCTGTCTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp CATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGACACGGTGGGTGTCCATaGGTGGGCTGCTCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: HGDTARQWGRGDVFLARGHGGCP*VGCSSA
Trigger: GGCACTGGAGCAGCCCACCAATGGACACCCACCGTG...TCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp GACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAGTTGGGCAGCAGCGAGTCAGTaGCATCTTCCTCCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: DTARQWGRGDVFLARGSWAAASQ*HLPPPL
Trigger: GAGCGGAGGAGGAAGATGCAACTGACTCGCTGCTGC...CCAACTTCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp GCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCATATGAGGGGACCAGTTaGCGCGGAGCGCTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: AEWGQVSSEESPVSVCMAYEGTS*RGALVG
Trigger: GCCCACCAGCGCTCCGCGCAAACTGGTCCCCTCATA...TGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp GGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGGGTCTCTGCTGGCATTaGTGCCTTGGTGATGGTGCC +
Preference number: 5 (lower is better)
Translates to: GWTPCPCEDQAGTEVSGKGLCWH*CLGDGA
Trigger: GGCACCATCACCAAGGCACAAATGCCAGCAGAGACC...CTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp CCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGGCAGCAGCGAGTCAGTaGCATCTTCCTCCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: PCEDQAGTEVSGKNSRDQAAASQ*HLPPPL
Trigger: GAGCGGAGGAGGAAGATGCAACTGACTCGCTGCTGC...CTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp CCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGTCTCGGGAGCAGATCTaGGCTGGGTCGTGGGTGCAA +
Preference number: 5 (lower is better)
Translates to: PCEDQAGTEVSGKNSRDQSREQI*AGSWVQ
Trigger: TTGCACCCACGACCCAGCCAAGATCTGCTCCCGAGA...CTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp GGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGCCCTTTCTCTGCCACTaGAGACTTGGCCCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: GTGFFRGISCECVHGKSGPFLCH*RLGPGP
Trigger: GGGGCCAGGGCCAAGTCTCAAGTGGCAGAGAAAGGG...CCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACTCCCTGAGCTGTTCTaGAAGATGCTACGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: LSQRKLDGPLALVRTKRALPELF*KMLRPP
Trigger: AGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAG...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp GGGTGGCAAGCCCATCTTACCTTACTGCCAGGACTCTCCTCTCCTCAAGAGGGCGCATTTCAGACTGCCTaGAAGGGCAGTGGATGGGGA +
Preference number: 5 (lower is better)
Translates to: GWQAHLTLLPGLSSPQEGAFQTA*KGSGWG
Trigger: TCCCCATCCACTGCCCTTCAAGGCAGTCTGAAATGC...GCCCTCTTGAGGAGAGGAGAGTCCTGGCAGTAAGGTAAGATGGGCTTGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp GGGCATCACCATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTATCCATAGCACAGTTCTaGCCCTCAGGGAGACTCCAG +
Preference number: 5 (lower is better)
Translates to: GHHHGDTARQWGRGDVFLSIAQF*PSGRLQ
Trigger: CTGGAGTCTCCCTGAGGGCAAGAACTGTGCTATGGA...TAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCCCCTGGCCTGTGGCATaGTGTTGGAAGTGGACGCTG +
Preference number: 5 (lower is better)
Translates to: QVSSEESPVSVCMARVGGPWPVA*CWKWTL
Trigger: CAGCGTCCACTTCCAACACAATGCCACAGGCCAGGG...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp GCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCACCCTGGCCTGTGGCATaGTGTTGGAAGTGGACGCTG +
Preference number: 5 (lower is better)
Translates to: AEWGQVSSEESPVSVCMAPWPVA*CWKWTL
Trigger: CAGCGTCCACTTCCAACACAATGCCACAGGCCAGGG...TGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp CAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGCACTCCATCCGGCAGTaGAAGATTTTGGAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: QRKLDGPLALVRTKRAQKHSIRQ*KILEAL
Trigger: CAAGGCCTCCAAAATCTTCAACTGCCGGATGGAGTG...CTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp GGGCATCACCATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTATTGGATCCCTGCCACTaGGGTCTCAAGCAAATGTCC +
Preference number: 5 (lower is better)
Translates to: GHHHGDTARQWGRGDVFLLDPCH*GLKQMS
Trigger: GGACATTTGCTTGAGACCCAAGTGGCAGGGATCCAA...TAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATGGTGATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCCCGAGCCCAGGGTGTTaGCTCAAGTTTCCTCGTGGG +
Preference number: 5 (lower is better)
Translates to: QVSSEESPVSVCMARVGGPSPGC*LKFPRG
Trigger: CCCACGAGGAAACTTGAGCAAACACCCTGGGCTCGG...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp GGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGGAAGGCACTGTGACCTaGGTAGTGTCTTCCCTTCAC +
Preference number: 5 (lower is better)
Translates to: GWTPCPCEDQAGTEVSGKEGTVT*VVSSLH
Trigger: GTGAAGGGAAGACACTACCAAGGTCACAGTGCCTTC...CTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCGCTGGCATTTGTGCCTaGGTGATGGTGCCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: QVSSEESPVSVCMARVGGAGICA*VMVPAA
Trigger: GGCAGCTGGCACCATCACCAAGGCACAAATGCCAGC...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp GGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGCCTAGGAGAGTGGAATaGGCCATGGGGCGGGACTTA +
Preference number: 5 (lower is better)
Translates to: GTGFFRGISCECVHGKSGPRRVE*AMGRDL
Trigger: TAAGTCCCGCCCCATGGCCAATTCCACTCTCCTAGG...CCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp GTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTTCTCGGGAGCAGATCTaGGCTGGGTCGTGGGTGCAA +
Preference number: 5 (lower is better)
Translates to: VGTGFFRGISCECVHGKSSREQI*AGSWVQ
Trigger: TTGCACCCACGACCCAGCCAAGATCTGCTCCCGAGA...ACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp AGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGGGTTGGGACCAGCACTaGGGACCCTTTCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: RVGTGFFRGISCECVHGKGWDQH*GPFLCH
Trigger: GTGGCAGAGAAAGGGTCCCAAGTGCTGGTCCCAACC...CTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp CTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGAAGGAGACTCGGGCATaGCTACCAGTTGACCTAACG +
Preference number: 5 (lower is better)
Translates to: LLSQRKLDGPLALVRTKRKETRA*LPVDLT
Trigger: CGTTAGGTCAACTGGTAGCAATGCCCGAGTCTCCTT...CCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp CTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCATGTGTTGCCAGTTTATaGGCAGCCTCTGCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: LSQRKLDGPLALVRTKRACVASL*AASAVQ
Trigger: CTGAACTGCAGAGGCTGCCAATAAACTGGCAACACA...TGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp TTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGGCACAGAAGTATCTGGCACCTGCAACACCTGTGTaGCCAGTTTATTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LDGPLALVRTKRAQKYLAPATPV*PVYWQP
Trigger: AGGCTGCCAATAAACTGGCAACACAGGTGTTGCAGG...TGCCAGATACTTCTGTGCCCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCACGCTGAAGGTCCCATaGCCATGGTCCACAATCTTC +
Preference number: 5 (lower is better)
Translates to: GRVGTGFFRGISCECVHGTLKVP*PWSTIF
Trigger: GAAGATTGTGGACCATGGCAATGGGACCTTCAGCGT...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp CATGGGGACACTGCTCGCCAATGGGGCAGAGGTGACGTCTTCTTAGCCAGAGGAAAGATTTTGGAGGCCTaGGCTTCGATGAAGATCTGC +
Preference number: 5 (lower is better)
Translates to: HGDTARQWGRGDVFLARGKILEA*ASMKIC
Trigger: GCAGATCTTCATCGAAGCCAAGGCCTCCAAAATCTT...TCCTCTGGCTAAGAAGACGTCACCTCTGCCCCATTGGCGAGCAGTGTCCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp CAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGTGGGAGGCCCTGAGGCCCTTTCCTaGGACAACTCTGACTCCAGT +
Preference number: 5 (lower is better)
Translates to: QVSSEESPVSVCMARVGGPEALS*DNSDSS
Trigger: ACTGGAGTCAGAGTTGTCCAAGGAAAGGGCCTCAGG...GCCTCCCACTCTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp ACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCATCTCCCCCTCCCTGTaGCTATCTTTCCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: TKRAQKYLARTVGTRGLFISPSL*LSFLRM
Trigger: CATCCTGAGGAAAGATAGCAACAGGGAGGGGGAGAT...GAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp AACACCTGTGTTGCCAGTTTATTGGCAGCCTCTGCAGTTCAGGAGGACCTAGCTGCAGAAGAGGGAATTTaGGAAAGGGGTGGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: NTCVASLLAASAVQEDLAAEEGI*ERGGLA
Trigger: AGCCAGGCCACCCCTTTCCAAAATTCCCTCTTCTGC...AGCTAGGTCCTCCTGAACTGCAGAGGCTGCCAATAAACTGGCAACACAGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp TATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGGTAGGACCTGGCCCTTaGGGGTCTGGGCAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: YLARTVGTRGLFQRIKVWVGPGP*GSGQSG
Trigger: CCCACTCTGCCCAGACCCCAAAGGGCCAGGTCCTAC...CCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp TCCCTCCCTGAGCTGTTCTTGAAGATGCTACGCCCTCCTCCAGCACCGAGCCCACAGGACTCGGAATCTTaGGAAGTAACATTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: SLPELFLKMLRPPPAPSPQDSES*EVTFLS
Trigger: AGACAGAAATGTTACTTCCAAAGATTCCGAGTCCTG...TGGGCTCGGTGCTGGAGGAGGGCGTAGCATCTTCAAGAACAGCTCAGGGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp GGCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGATTTTGGAGGCCTaGGCTTCGATGAAGATCTGC +
Preference number: 5 (lower is better)
Translates to: GRVGTGFFRGISCECVHGKILEA*ASMKIC
Trigger: GCAGATCTTCATCGAAGCCAAGGCCTCCAAAATCTT...GCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp AGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGTTATCAGGTCAGCCTTaGAGCCTGGGAGACCAACAG +
Preference number: 5 (lower is better)
Translates to: RVGTGFFRGISCECVHGKLSGQP*SLGDQQ
Trigger: CTGTTGGTCTCCCAGGCTCAAAGGCTGACCTGATAA...CTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp GTGAGGACCAAGCGGGCACAGAAGTATCTGGCAAGAACAGTAGGGACCAGAGGGCTAGGCATCCTTCACTaGAATTATCAGGTCAGCCTT +
Preference number: 5 (lower is better)
Translates to: VRTKRAQKYLARTVGTRGLGILH*NYQVSL
Trigger: AAGGCTGACCTGATAATTCAAGTGAAGGATGCCTAG...CCCTCTGGTCCCTACTGTTCTTGCCAGATACTTCTGTGCCCGCTTGGTCCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp GTTCTCCTGGCAGTACCACAGGACTCGGAATCTTTGGAAGTAACATTTCTGTCTCCTAGGAGAGTGGAATaGGCCATGGGGCGGGACTTA +
Preference number: 5 (lower is better)
Translates to: VLLAVPQDSESLEVTFLSPRRVE*AMGRDL
Trigger: TAAGTCCCGCCCCATGGCCAATTCCACTCTCCTAGG...AGACAGAAATGTTACTTCCAAAGATTCCGAGTCCTGTGGTACTGCCAGGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp CTTCTTAGCCAGAGGAAGTTGGATGGACCCCTTGCCCTTGTGAGGACCAAGCGGTGGCATGTGGTCAGATaGAAAATCCAATACAATAGC +
Preference number: 5 (lower is better)
Translates to: LLSQRKLDGPLALVRTKRWHVVR*KIQYNS
Trigger: GCTATTGTATTGGATTTTCAATCTGACCACATGCCA...CCGCTTGGTCCTCACAAGGGCAAGGGGTCCATCCAACTTCCTCTGGCTAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp GCAGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGAGCAACTGTTTCATaGTGTCTCTACAATCCCTCC +
Preference number: 5 (lower is better)
Translates to: AEWGQVSSEESPVSVCMARATVS*CLYNPS
Trigger: GGAGGGATTGTAGAGACACAATGAAACAGTTGCTCT...TGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp TATCTGGCAAGAACAGTAGGGACCAGAGGGCTATTCCAAAGAATTAAGGTTTGGCACTCCATCCGGCAGTaGAAGATTTTGGAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: YLARTVGTRGLFQRIKVWHSIRQ*KILEAL
Trigger: CAAGGCCTCCAAAATCTTCAACTGCCGGATGGAGTG...CCAAACCTTAATTCTTTGGAATAGCCCTCTGGTCCCTACTGTTCTTGCCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS-3UTR CAA 90 bp GCAAGCTTTATTTCCTGCTCCAAGAACACGATTCTTCACACAAAAGTCAGCAATACCCAGACAGCGCCTTaGAGCAAAGCTGAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: ASFISCSKNTILHTKVSNTQTAP*SKAEGQ
Trigger: CTGCCCTTCAGCTTTGCTCAAAGGCGCTGTCTGGGT...ATTGCTGACTTTTGTGTGAAGAATCGTGTTCTTGGAGCAGGAAATAAAGCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS-3UTR CAA 90 bp AGAGTGGGGACAGGTTTCTTCAGAGGAATCTCCTGTGAGTGTGTGCATGGCAAGGGGAAATTATGTCATTaGTCCAAAGCCACACGTCTA +
Preference number: 5 (lower is better)
Translates to: RVGTGFFRGISCECVHGKGKLCH*SKATRL
Trigger: TAGACGTGTGGCTTTGGACAAATGACATAATTTCCC...CTTGCCATGCACACACTCACAGGAGATTCCTCTGAAGAAACCTGTCCCCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS CCA 72 bp GCGCCCCGAGCGCCTCGAAGGGCCCCAGCTGCGCCGTaGCTCTGCTGCTCCAGATCTGCGCTCGGCGCCCCC +
Preference number: 6 (lower is better)
Translates to: APRAPRRAPAAP*LCCSRSALGAP
Trigger: GGGGGCGCCGAGCGCAGATCTGGAGCAGCAGAGCCACGGCGCAGCTGGGGCCCTTCGAGGCGCTCGGGGCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328741.6
CDS CCA 72 bp TGGCTGAGCTCTGAGCGTGGTCTCGGGAGCAGATCTTaGCTGGGTCGTGGGTGCAAAGCGAGGTCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: WLSSERGLGSRS*LGRGCKARSGG
Trigger: GCCGCCGGACCTCGCTTTGCACCCACGACCCAGCCAAGATCTGCTCCCGAGACCACGCTCAGAGCTCAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328741.6
ENST00000513748.1
ENST00000570453.1
CDS TCA 72 bp GGGCTGGCCCTCGTGGTCATCACGCTCAGGGTCCTCTaGGCCGGGAGGACCATCATCCTGGCCACAGATGAC +
Preference number: 6 (lower is better)
Translates to: GLALVVITLRVL*AGRTIILATDD
Trigger: GTCATCTGTGGCCAGGATGATGGTCCTCCCGGCTCAGAGGACCCTGAGCGTGATGACCACGAGGGCCAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS GCA 72 bp CGTGGTCTCGGGAGCAGATCTTGGCTGGGTCGTGGGTaGAAAGCGAGGTCCGGCGGCCCCGTTCTACCTTCT +
Preference number: 6 (lower is better)
Translates to: RGLGSRSWLGRG*KARSGGPVLPS
Trigger: AGAAGGTAGAACGGGGCCGCCGGACCTCGCTTTGCACCCACGACCCAGCCAAGATCTGCTCCCGAGACCACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328741.6
ENST00000513748.1
ENST00000570453.1
CDS GCA 72 bp CCCTGCACCAGGAACACGAAGCAGCAGCGAGTCAGTTaGATCTTCCTCCTCCGCTCTCGTCCCCTCGCTCTC +
Preference number: 6 (lower is better)
Translates to: PCTRNTKQQRVS*IFLLRSRPLAL
Trigger: GAGAGCGAGGGGACGAGAGCGGAGGAGGAAGATGCAACTGACTCGCTGCTGCTTCGTGTTCCTGGTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS CAA 72 bp ACCCTGCACCAGGAACACGAAGCAGCAGCGAGTCAGTaGCATCTTCCTCCTCCGCTCTCGTCCCCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: TLHQEHEAAASQ*HLPPPLSSPRS
Trigger: AGAGCGAGGGGACGAGAGCGGAGGAGGAAGATGCAACTGACTCGCTGCTGCTTCGTGTTCCTGGTGCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS CAA 90 bp ATAGAGGCTACCCTGCACCAGGAACACGAAGCAGCAGCGAGTCAGTaGCATCTTCCTCCTCCGCTCTCGTCCCCTCGCTCTCCCCTTCTC +
Preference number: 6 (lower is better)
Translates to: IEATLHQEHEAAASQ*HLPPPLSSPRSPLL
Trigger: GAGAAGGGGAGAGCGAGGGGACGAGAGCGGAGGAGGAAGATGCAACTGACTCGCTGCTGCTTCGTGTTCCTGGTGCAGGGTAGCCTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328741.6
ENST00000513748.1
CDS CAA 90 bp CCCTGGCCTGTGGCATTGTGTTGGAAGTGGACGCTGAAGGTCCCATaGCCATGGTCCACAATCTTCCCTGTGACGAGCAGGTTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: PWPVALCWKWTLKVP*PWSTIFPVTSRFRA
Trigger: GGCCCTGAACCTGCTCGTCACAGGGAAGATTGTGGACCATGGCAATGGGACCTTCAGCGTCCACTTCCAACACAATGCCACAGGCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328741.6
ENST00000513748.1
ENST00000570453.1
CDS CAA 90 bp GAGGTCCGGCGGCCCCGTTCTACCTTCTCCCACTCCATCCGGCAGTaGAAGATTTTGGAGGCCTTGGCTTCGATGAAGATCTGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: EVRRPRSTFSHSIRQ*KILEALASMKICCS
Trigger: GGAACAGCAGATCTTCATCGAAGCCAAGGCCTCCAAAATCTTCAACTGCCGGATGGAGTGGGAGAAGGTAGAACGGGGCCGCCGGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328741.6
ENST00000513748.1
ENST00000570453.1
CDS CAA 90 bp CGGCCCCGTTCTACCTTCTCCCACTCCATCCGGCAGTTGAAGATTTaGGAGGCCTTGGCTTCGATGAAGATCTGCTGTTCCTGGTGGAAC +
Preference number: 6 (lower is better)
Translates to: RPRSTFSHSIRQLKI*EALASMKICCSWWN
Trigger: GTTCCACCAGGAACAGCAGATCTTCATCGAAGCCAAGGCCTCCAAAATCTTCAACTGCCGGATGGAGTGGGAGAAGGTAGAACGGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328741.6
ENST00000513748.1
ENST00000570453.1
CDS CAA 72 bp CGGCCCCGTTCTACCTTCTCCCACTCCATCCGGCAGTaGAAGATTTTGGAGGCCTTGGCTTCGATGAAGATC +
Preference number: 6 (lower is better)
Translates to: RPRSTFSHSIRQ*KILEALASMKI
Trigger: GATCTTCATCGAAGCCAAGGCCTCCAAAATCTTCAACTGCCGGATGGAGTGGGAGAAGGTAGAACGGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328741.6
ENST00000513748.1
ENST00000570453.1
CDS CAA 72 bp TCCCACTCCATCCGGCAGTTGAAGATTTTGGAGGCCTaGGCTTCGATGAAGATCTGCTGTTCCTGGTGGAAC +
Preference number: 6 (lower is better)
Translates to: SHSIRQLKILEA*ASMKICCSWWN
Trigger: GTTCCACCAGGAACAGCAGATCTTCATCGAAGCCAAGGCCTCCAAAATCTTCAACTGCCGGATGGAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328741.6
ENST00000513748.1
ENST00000570453.1
CDS CAA 90 bp TCTACCTTCTCCCACTCCATCCGGCAGTTGAAGATTTTGGAGGCCTaGGCTTCGATGAAGATCTGCTGTTCCTGGTGGAACTCTACAGCT +
Preference number: 6 (lower is better)
Translates to: STFSHSIRQLKILEA*ASMKICCSWWNSTA
Trigger: AGCTGTAGAGTTCCACCAGGAACAGCAGATCTTCATCGAAGCCAAGGCCTCCAAAATCTTCAACTGCCGGATGGAGTGGGAGAAGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328741.6
ENST00000513748.1
ENST00000570453.1
CDS GCA 72 bp TTGAAGATTTTGGAGGCCTTGGCTTCGATGAAGATCTaGTGTTCCTGGTGGAACTCTACAGCTTTACTGGGG +
Preference number: 6 (lower is better)
Translates to: LKILEALASMKI*CSWWNSTALLG
Trigger: CCCCAGTAAAGCTGTAGAGTTCCACCAGGAACAGCAGATCTTCATCGAAGCCAAGGCCTCCAAAATCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328741.6
ENST00000513748.1
ENST00000570453.1